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Sample records for modelling respiration rate

  1. Measurement and Modeling of Respiration Rate of Tomato (Cultivar Roma) for Modified Atmosphere Storage.

    Science.gov (United States)

    Kandasamy, Palani; Moitra, Ranabir; Mukherjee, Souti

    2015-01-01

    Experiments were conducted to determine the respiration rate of tomato at 10, 20 and 30 °C using closed respiration system. Oxygen depletion and carbon dioxide accumulation in the system containing tomato was monitored. Respiration rate was found to decrease with increasing CO2 and decreasing O2 concentration. Michaelis-Menten type model based on enzyme kinetics was evaluated using experimental data generated for predicting the respiration rate. The model parameters that obtained from the respiration rate at different O2 and CO2 concentration levels were used to fit the model against the storage temperatures. The fitting was fair (R2 = 0.923 to 0.970) when the respiration rate was expressed as O2 concentation. Since inhibition constant for CO2 concentration tended towards negetive, the model was modified as a function of O2 concentration only. The modified model was fitted to the experimental data and showed good agreement (R2 = 0.998) with experimentally estimated respiration rate.

  2. Estimation of microbial respiration rates in groundwater by geochemical modeling constrained with stable isotopes

    International Nuclear Information System (INIS)

    Murphy, E.M.

    1998-01-01

    Changes in geochemistry and stable isotopes along a well-established groundwater flow path were used to estimate in situ microbial respiration rates in the Middendorf aquifer in the southeastern United States. Respiration rates were determined for individual terminal electron acceptors including O 2 , MnO 2 , Fe 3+ , and SO 4 2- . The extent of biotic reactions were constrained by the fractionation of stable isotopes of carbon and sulfur. Sulfur isotopes and the presence of sulfur-oxidizing microorganisms indicated that sulfate is produced through the oxidation of reduced sulfur species in the aquifer and not by the dissolution of gypsum, as previously reported. The respiration rates varied along the flow path as the groundwater transitioned between primarily oxic to anoxic conditions. Iron-reducing microorganisms were the largest contributors to the oxidation of organic matter along the portion of the groundwater flow path investigated in this study. The transition zone between oxic and anoxic groundwater contained a wide range of terminal electron acceptors and showed the greatest diversity and numbers of culturable microorganisms and the highest respiration rates. A comparison of respiration rates measured from core samples and pumped groundwater suggests that variability in respiration rates may often reflect the measurement scales, both in the sample volume and the time-frame over which the respiration measurement is averaged. Chemical heterogeneity may create a wide range of respiration rates when the scale of the observation is below the scale of the heterogeneity

  3. Redefinition and global estimation of basal ecosystem respiration rate

    DEFF Research Database (Denmark)

    Yuan, Wenping; Luo, Yiqi; Li, Xianglan

    2011-01-01

    Basal ecosystem respiration rate (BR), the ecosystem respiration rate at a given temperature, is a common and important parameter in empirical models for quantifying ecosystem respiration (ER) globally. Numerous studies have indicated that BR varies in space. However, many empirical ER models sti...

  4. Redefinition and global estimation of basal ecosystem respiration rate

    Energy Technology Data Exchange (ETDEWEB)

    Yuan, Wenping [College of Global Change and Earth System Science, Beijing Normal University, Beijing, China; Luo, Yiqi [Department of Botany and Microbiology, University of Oklahoma, Norman, Oklahoma, USA; Li, Xianglan [College of Global Change and Earth System Science, Beijing Normal University, Beijing, China; Liu, Shuguang; Yu, Guirui [Key Laboratory of Ecosystem Network Observation and Modeling, Synthesis Research Center of Chinese Ecosystem Research Network, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China; Zhou, Tao [State Key Laboratory of Earth Surface Processes and Resource Ecology, Beijing Normal University, Beijing, China; Bahn, Michael [Institute of Ecology, University of Innsbruck, Innsbruck, Austria; Black, Andy [Faculty of Land and Food Systems, University of British Columbia, Vancouver, B. C., Canada; Desai, Ankur R. [Atmospheric and Oceanic Sciences Department, Center for Climatic Research, Nelson Institute for Environmental Studies, University of Wisconsin-Madison, Madison, Wisconsin, USA; Cescatti, Alessandro [Institute for Environment and Sustainability, Joint Research Centre, European Commission, Ispra, Italy; Marcolla, Barbara [Sustainable Agro-ecosystems and Bioresources Department, Fondazione Edmund Mach-IASMA Research and Innovation Centre, San Michele all' Adige, Italy; Jacobs, Cor [Alterra, Earth System Science-Climate Change, Wageningen University, Wageningen, Netherlands; Chen, Jiquan [Department of Earth, Ecological, and Environmental Sciences, University of Toledo, Toledo, Ohio, USA; Aurela, Mika [Climate and Global Change Research, Finnish Meteorological Institute, Helsinki, Finland; Bernhofer, Christian [Chair of Meteorology, Institute of Hydrology and Meteorology, Technische Universität Dresden, Dresden, Germany; Gielen, Bert [Department of Biology, University of Antwerp, Wilrijk, Belgium; Bohrer, Gil [Department of Civil, Environmental, and Geodetic Engineering, Ohio State University, Columbus, Ohio, USA; Cook, David R. [Climate Research Section, Environmental Science Division, Argonne National Laboratory, Argonne, Illinois, USA; Dragoni, Danilo [Department of Geography, Indiana University, Bloomington, Indiana, USA; Dunn, Allison L. [Department of Physical and Earth Sciences, Worcester State College, Worcester, Massachusetts, USA; Gianelle, Damiano [Sustainable Agro-ecosystems and Bioresources Department, Fondazione Edmund Mach-IASMA Research and Innovation Centre, San Michele all' Adige, Italy; Grünwald, Thomas [Chair of Meteorology, Institute of Hydrology and Meteorology, Technische Universität Dresden, Dresden, Germany; Ibrom, Andreas [Risø DTU National Laboratory for Sustainable Energy, Biosystems Division, Technical University of Denmark, Roskilde, Denmark; Leclerc, Monique Y. [Department of Crop and Soil Sciences, College of Agricultural and Environmental Sciences, University of Georgia, Griffin, Georgia, USA; Lindroth, Anders [Geobiosphere Science Centre, Physical Geography and Ecosystems Analysis, Lund University, Lund, Sweden; Liu, Heping [Laboratory for Atmospheric Research, Department of Civil and Environmental Engineering, Washington State University, Pullman, Washington, USA; Marchesini, Luca Belelli [Department for Innovation in Biological, Agro-Food and Forest Systems, University of Tuscia, Viterbo, Italy; Montagnani, Leonardo; Pita, Gabriel [Department of Mechanical Engineering, Instituto Superior Técnico, Lisbon, Portugal; Rodeghiero, Mirco [Sustainable Agro-ecosystems and Bioresources Department, Fondazione Edmund Mach-IASMA Research and Innovation Centre, San Michele all' Adige, Italy; Rodrigues, Abel [Unidade de Silvicultura e Produtos Florestais, Instituto Nacional dos Recursos Biológicos, Oeiras, Portugal; Starr, Gregory [Department of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA; Stoy, Paul C. [Department of Land Resources and Environmental Sciences, Montana State University, Bozeman, Montana, USA

    2011-10-13

    Basal ecosystem respiration rate (BR), the ecosystem respiration rate at a given temperature, is a common and important parameter in empirical models for quantifying ecosystem respiration (ER) globally. Numerous studies have indicated that BR varies in space. However, many empirical ER models still use a global constant BR largely due to the lack of a functional description for BR. In this study, we redefined BR to be ecosystem respiration rate at the mean annual temperature. To test the validity of this concept, we conducted a synthesis analysis using 276 site-years of eddy covariance data, from 79 research sites located at latitudes ranging from ~3°S to ~70°N. Results showed that mean annual ER rate closely matches ER rate at mean annual temperature. Incorporation of site-specific BR into global ER model substantially improved simulated ER compared to an invariant BR at all sites. These results confirm that ER at the mean annual

  5. Toward the definition of a carbon budget model: seasonal variation and temperature effect on respiration rate of vegetative and reproductive organs of pistachio trees (Pistacia vera).

    Science.gov (United States)

    Marra, Francesco P; Barone, Ettore; La Mantia, Michele; Caruso, Tiziano

    2009-09-01

    This study, as a preliminary step toward the definition of a carbon budget model for pistachio trees (Pistacia vera L.), aimed at estimating and evaluating the dynamics of respiration of vegetative and reproductive organs of pistachio tree. Trials were performed in 2005 in a commercial orchard located in Sicily (370 m a.s.l.) on five bearing 20-year-old pistachio trees of cv. Bianca grafted onto Pistachio terebinthus L. Growth analyses and respiration measurements were done on vegetative (leaf) and reproductive (infructescence) organs during the entire growing season (April-September) at biweekly intervals. Results suggested that the respiration rates of pistachio reproductive and vegetative organs were related to their developmental stage. Both for leaf and for infructescence, the highest values were observed during the earlier stages of growth corresponding to the phases of most intense organ growth. The sensitivity of respiration activity to temperature changes, measured by Q(10), showed an increase throughout the transition from immature to mature leaves, as well as during fruit development. The data collected were also used to estimate the seasonal carbon loss by respiration activity for a single leaf and a single infructescence. The amount of carbon lost by respiration was affected by short-term temperature patterns, organ developmental stage and tissue function.

  6. Interpreting, measuring, and modeling soil respiration

    Science.gov (United States)

    Michael G. Ryan; Beverly E. Law

    2005-01-01

    This paper reviews the role of soil respiration in determining ecosystem carbon balance, and the conceptual basis for measuring and modeling soil respiration. We developed it to provide background and context for this special issue on soil respiration and to synthesize the presentations and discussions at the workshop. Soil respiration is the largest component of...

  7. Redefinition and global estimation of basal ecosystem respiration rate

    Science.gov (United States)

    Yuan, W.; Luo, Y.; Li, X.; Liu, S.; Yu, G.; Zhou, T.; Bahn, M.; Black, A.; Desai, A.R.; Cescatti, A.; Marcolla, B.; Jacobs, C.; Chen, J.; Aurela, M.; Bernhofer, C.; Gielen, B.; Bohrer, G.; Cook, D.R.; Dragoni, D.; Dunn, A.L.; Gianelle, D.; Grnwald, T.; Ibrom, A.; Leclerc, M.Y.; Lindroth, A.; Liu, H.; Marchesini, L.B.; Montagnani, L.; Pita, G.; Rodeghiero, M.; Rodrigues, A.; Starr, G.; Stoy, Paul C.

    2011-01-01

    Basal ecosystem respiration rate (BR), the ecosystem respiration rate at a given temperature, is a common and important parameter in empirical models for quantifying ecosystem respiration (ER) globally. Numerous studies have indicated that BR varies in space. However, many empirical ER models still use a global constant BR largely due to the lack of a functional description for BR. In this study, we redefined BR to be ecosystem respiration rate at the mean annual temperature. To test the validity of this concept, we conducted a synthesis analysis using 276 site-years of eddy covariance data, from 79 research sites located at latitudes ranging from ∼3°S to ∼70°N. Results showed that mean annual ER rate closely matches ER rate at mean annual temperature. Incorporation of site-specific BR into global ER model substantially improved simulated ER compared to an invariant BR at all sites. These results confirm that ER at the mean annual temperature can be considered as BR in empirical models. A strong correlation was found between the mean annual ER and mean annual gross primary production (GPP). Consequently, GPP, which is typically more accurately modeled, can be used to estimate BR. A light use efficiency GPP model (i.e., EC-LUE) was applied to estimate global GPP, BR and ER with input data from MERRA (Modern Era Retrospective-Analysis for Research and Applications) and MODIS (Moderate resolution Imaging Spectroradiometer). The global ER was 103 Pg C yr −1, with the highest respiration rate over tropical forests and the lowest value in dry and high-latitude areas.

  8. What controls respiration rate in stored sugarbeet roots

    Science.gov (United States)

    Although respiration is estimated to be responsible for 60 to 80% of the sucrose lost during storage, the mechanisms by which sugarbeet roots regulate their respiration rate are unknown. In plants, respiration rate is regulated by (1) available respiratory capacity, (2) cellular energy status, (3) ...

  9. Two Proximal Skin Electrodes — A Respiration Rate Body Sensor

    Directory of Open Access Journals (Sweden)

    Viktor Avbelj

    2012-10-01

    Full Text Available We propose a new body sensor for extracting the respiration rate based on the amplitude changes in the body surface potential differences between two proximal body electrodes. The sensor could be designed as a plaster-like reusable unit that can be easily fixed onto the surface of the body. It could be equipped either with a sufficiently large memory for storing the measured data or with a low-power radio system that can transmit the measured data to a gateway for further processing. We explore the influence of the sensor’s position on the quality of the extracted results using multi-channel ECG measurements and considering all the pairs of two neighboring electrodes as potential respiration-rate sensors. The analysis of the clinical measurements, which also include reference thermistor-based respiration signals, shows that the proposed approach is a viable option for monitoring the respiration frequency and for a rough classification of breathing types. The obtained results were evaluated on a wireless prototype of a respiration body sensor. We indicate the best positions for the respiration body sensor and prove that a single sensor for body surface potential difference on proximal skin electrodes can be used for combined measurements of respiratory and cardiac activities.

  10. Modeling respiration from snags and coarse woody debris before and after an invasive gypsy moth disturbance

    Science.gov (United States)

    Heidi J. Renninger; Nicholas Carlo; Kenneth L. Clark; Karina V.R. Schäfer

    2014-01-01

    Although snags and coarse woody debris are a small component of ecosystem respiration, disturbances can significantly increase the mass and respiration from these carbon (C) pools. The objectives of this study were to (1) measure respiration rates of snags and coarse woody debris throughout the year in a forest previously defoliated by gypsy moths, (2) develop models...

  11. Soil respiration patterns and rates at three Taiwanese forest plantations: dependence on elevation, temperature, precipitation, and litterfall.

    Science.gov (United States)

    Huang, Yu-Hsuan; Hung, Chih-Yu; Lin, I-Rhy; Kume, Tomonori; Menyailo, Oleg V; Cheng, Chih-Hsin

    2017-11-15

    Soil respiration contributes to a large quantity of carbon emissions in the forest ecosystem. In this study, the soil respiration rates at three Taiwanese forest plantations (two lowland and one mid-elevation) were investigated. We aimed to determine how soil respiration varies between lowland and mid-elevation forest plantations and identify the relative importance of biotic and abiotic factors affecting soil respiration. The results showed that the temporal patterns of soil respiration rates were mainly influenced by soil temperature and soil water content, and a combined soil temperature and soil water content model explained 54-80% of the variation. However, these two factors affected soil respiration differently. Soil temperature positively contributed to soil respiration, but a bidirectional relationship between soil respiration and soil water content was revealed. Higher soil moisture content resulted in higher soil respiration rates at the lowland plantations but led to adverse effects at the mid-elevation plantation. The annual soil respiration rates were estimated as 14.3-20.0 Mg C ha -1  year -1 at the lowland plantations and 7.0-12.2 Mg C ha -1  year -1 at the mid-elevation plantation. When assembled with the findings of previous studies, the annual soil respiration rates increased with the mean annual temperature and litterfall but decreased with elevation and the mean annual precipitation. A conceptual model of the biotic and abiotic factors affecting the spatial and temporal patterns of the soil respiration rate was developed. Three determinant factors were proposed: (i) elevation, (ii) stand characteristics, and (iii) soil temperature and soil moisture. The results indicated that changes in temperature and precipitation significantly affect soil respiration. Because of the high variability of soil respiration, more studies and data syntheses are required to accurately predict soil respiration in Taiwanese forests.

  12. Estimating Canopy Dark Respiration for Crop Models

    Science.gov (United States)

    Monje Mejia, Oscar Alberto

    2014-01-01

    Crop production is obtained from accurate estimates of daily carbon gain.Canopy gross photosynthesis (Pgross) can be estimated from biochemical models of photosynthesis using sun and shaded leaf portions and the amount of intercepted photosyntheticallyactive radiation (PAR).In turn, canopy daily net carbon gain can be estimated from canopy daily gross photosynthesis when canopy dark respiration (Rd) is known.

  13. Aquatic respiration rate measurements at low oxygen concentrations.

    Directory of Open Access Journals (Sweden)

    Moritz Holtappels

    Full Text Available Despite its huge ecological importance, microbial oxygen respiration in pelagic waters is little studied, primarily due to methodological difficulties. Respiration measurements are challenging because of the required high resolution of oxygen concentration measurements. Recent improvements in oxygen sensing techniques bear great potential to overcome these limitations. Here we compare 3 different methods to measure oxygen consumption rates at low oxygen concentrations, utilizing amperometric Clark type sensors (STOX, optical sensors (optodes, and mass spectrometry in combination with (18-18O2 labeling. Oxygen concentrations and consumption rates agreed well between the different methods when applied in the same experimental setting. Oxygen consumption rates between 30 and 400 nmol L(-1 h(-1 were measured with high precision and relative standard errors of less than 3%. Rate detection limits in the range of 1 nmol L(-1 h(-1 were suitable for rate determinations in open ocean water and were lowest at the lowest applied O2 concentration.

  14. Global spatiotemporal distribution of soil respiration modeled using a global database

    Science.gov (United States)

    Hashimoto, S.; Carvalhais, N.; Ito, A.; Migliavacca, M.; Nishina, K.; Reichstein, M.

    2015-07-01

    The flux of carbon dioxide from the soil to the atmosphere (soil respiration) is one of the major fluxes in the global carbon cycle. At present, the accumulated field observation data cover a wide range of geographical locations and climate conditions. However, there are still large uncertainties in the magnitude and spatiotemporal variation of global soil respiration. Using a global soil respiration data set, we developed a climate-driven model of soil respiration by modifying and updating Raich's model, and the global spatiotemporal distribution of soil respiration was examined using this model. The model was applied at a spatial resolution of 0.5°and a monthly time step. Soil respiration was divided into the heterotrophic and autotrophic components of respiration using an empirical model. The estimated mean annual global soil respiration was 91 Pg C yr-1 (between 1965 and 2012; Monte Carlo 95 % confidence interval: 87-95 Pg C yr-1) and increased at the rate of 0.09 Pg C yr-2. The contribution of soil respiration from boreal regions to the total increase in global soil respiration was on the same order of magnitude as that of tropical and temperate regions, despite a lower absolute magnitude of soil respiration in boreal regions. The estimated annual global heterotrophic respiration and global autotrophic respiration were 51 and 40 Pg C yr-1, respectively. The global soil respiration responded to the increase in air temperature at the rate of 3.3 Pg C yr-1 °C-1, and Q10 = 1.4. Our study scaled up observed soil respiration values from field measurements to estimate global soil respiration and provide a data-oriented estimate of global soil respiration. The estimates are based on a semi-empirical model parameterized with over one thousand data points. Our analysis indicates that the climate controls on soil respiration may translate into an increasing trend in global soil respiration and our analysis emphasizes the relevance of the soil carbon flux from soil to

  15. Estimate of respiration rate and physicochemical changes of fresh-cut apples stored under different temperatures

    Directory of Open Access Journals (Sweden)

    Cristiane Fagundes

    2013-03-01

    Full Text Available In this study, the influence of storage temperature and passive modified packaging (PMP on the respiration rate and physicochemical properties of fresh-cut Gala apples (Malus domestica B. was investigated. The samples were packed in flexible multilayer bags and stored at 2 °C, 5 °C, and 7 °C for eleven days. Respiration rate as a function of CO2 and O2 concentrations was determined using gas chromatography. The inhibition parameters were estimated using a mathematical model based on Michaelis-Menten equation. The following physicochemical properties were evaluated: total soluble solids, pH, titratable acidity, and reducing sugars. At 2 °C, the maximum respiration rate was observed after 150 hours. At 5 °C and 7 °C the maximum respiration rates were observed after 100 and 50 hours of storage, respectively. The inhibition model results obtained showed a clear effect of CO2 on O2 consumption. The soluble solids decreased, although not significantly, during storage at the three temperatures studied. Reducing sugars and titratable acidity decreased during storage and the pH increased. These results indicate that the respiration rate influenced the physicochemical properties.

  16. No diurnal variation in rate or carbon isotope composition of soil respiration in a boreal forest

    International Nuclear Information System (INIS)

    Betson, N.R.; Gottlicher, S.G.; Hogberg, P.; Hall, M.; Wallin, G.; Richter, A.

    2007-01-01

    This study evaluated the diurnal variability in the rate and stable carbon isotope ratio ((delta) 13 C) of soil respiration in a northern boreal forest, measured with opaque chambers after the removal of understory vegetation. The experiment was conducted in June and August 2004 at the Picea abies L. Karst-dominated Flakaliden Research Forest in northern Sweden, using unfertilized girdled-tree plots and unfertilized non-girdled tree plots. Soil respiration and (delta) 13 C of soil-respired carbon dioxide (CO 2 ) were measured every 4 hours on 6 plots, with a total of 11 sampling times over each 48 hour period. The purpose was to clarify an earlier study regarding the origin of diurnal patterns of soil CO 2 flux. This study explored whether the diurnal patterns were the result of photosynthetic CO 2 uptake during the day by the understory or whether there were underlying trends in soil respiration driven by plant root allocation. The sampling campaigns undertaken in this study investigated whether diurnal variations in soil respiration rate and (delta) 13 C exist in this ecosystem when no understory vegetation is present. Shoot photosynthesis and environmental parameters were measured simultaneously. Despite significant variations in climatic conditions and shoot photosynthetic rates in non-girdled trees, no diurnal patterns in soil respiration rates and (delta) 13 C were noted in either treatment. The lack of detectable diurnal changes in both treatments indicates that modeling of daily boreal forest carbon balances based on single instantaneous measurements are unlikely to be misconstrued by substantial diurnal trends. However, it was suggested that spatial variable should be accounted for, given the large standard errors. The impact of tree girdling on soil respiration rates also emphasized the significance of canopy photosynthesis in driving soil processes. 37 refs., 2 figs

  17. A Medical Cloud-Based Platform for Respiration Rate Measurement and Hierarchical Classification of Breath Disorders

    Directory of Open Access Journals (Sweden)

    Atena Roshan Fekr

    2014-06-01

    Full Text Available The measurement of human respiratory signals is crucial in cyberbiological systems. A disordered breathing pattern can be the first symptom of different physiological, mechanical, or psychological dysfunctions. Therefore, a real-time monitoring of the respiration patterns, as well as respiration rate is a critical need in medical applications. There are several methods for respiration rate measurement. However, despite their accuracy, these methods are expensive and could not be integrated in a body sensor network. In this work, we present a real-time cloud-based platform for both monitoring the respiration rate and breath pattern classification, remotely. The proposed system is designed particularly for patients with breathing problems (e.g., respiratory complications after surgery or sleep disorders. Our system includes calibrated accelerometer sensor, Bluetooth Low Energy (BLE and cloud-computing model. We also suggest a procedure to improve the accuracy of respiration rate for patients at rest positions. The overall error in the respiration rate calculation is obtained 0.53% considering SPR-BTA spirometer as the reference. Five types of respiration disorders, Bradapnea, Tachypnea, Cheyn-stokes, Kaussmal, and Biot’s breathing are classified based on hierarchical Support Vector Machine (SVM with seven different features. We have evaluated the performance of the proposed classification while it is individualized to every subject (case 1 as well as considering all subjects (case 2. Since the selection of kernel function is a key factor to decide SVM’s performance, in this paper three different kernel functions are evaluated. The experiments are conducted with 11 subjects and the average accuracy of 94.52% for case 1 and the accuracy of 81.29% for case 2 are achieved based on Radial Basis Function (RBF. Finally, a performance evaluation has been done for normal and impaired subjects considering sensitivity, specificity and G-mean parameters

  18. Linear programming model can explain respiration of fermentation products

    Science.gov (United States)

    Möller, Philip; Liu, Xiaochen; Schuster, Stefan

    2018-01-01

    Many differentiated cells rely primarily on mitochondrial oxidative phosphorylation for generating energy in the form of ATP needed for cellular metabolism. In contrast most tumor cells instead rely on aerobic glycolysis leading to lactate to about the same extent as on respiration. Warburg found that cancer cells to support oxidative phosphorylation, tend to ferment glucose or other energy source into lactate even in the presence of sufficient oxygen, which is an inefficient way to generate ATP. This effect also occurs in striated muscle cells, activated lymphocytes and microglia, endothelial cells and several mammalian cell types, a phenomenon termed the “Warburg effect”. The effect is paradoxical at first glance because the ATP production rate of aerobic glycolysis is much slower than that of respiration and the energy demands are better to be met by pure oxidative phosphorylation. We tackle this question by building a minimal model including three combined reactions. The new aspect in extension to earlier models is that we take into account the possible uptake and oxidation of the fermentation products. We examine the case where the cell can allocate protein on several enzymes in a varying distribution and model this by a linear programming problem in which the objective is to maximize the ATP production rate under different combinations of constraints on enzymes. Depending on the cost of reactions and limitation of the substrates, this leads to pure respiration, pure fermentation, and a mixture of respiration and fermentation. The model predicts that fermentation products are only oxidized when glucose is scarce or its uptake is severely limited. PMID:29415045

  19. Linear programming model can explain respiration of fermentation products.

    Science.gov (United States)

    Möller, Philip; Liu, Xiaochen; Schuster, Stefan; Boley, Daniel

    2018-01-01

    Many differentiated cells rely primarily on mitochondrial oxidative phosphorylation for generating energy in the form of ATP needed for cellular metabolism. In contrast most tumor cells instead rely on aerobic glycolysis leading to lactate to about the same extent as on respiration. Warburg found that cancer cells to support oxidative phosphorylation, tend to ferment glucose or other energy source into lactate even in the presence of sufficient oxygen, which is an inefficient way to generate ATP. This effect also occurs in striated muscle cells, activated lymphocytes and microglia, endothelial cells and several mammalian cell types, a phenomenon termed the "Warburg effect". The effect is paradoxical at first glance because the ATP production rate of aerobic glycolysis is much slower than that of respiration and the energy demands are better to be met by pure oxidative phosphorylation. We tackle this question by building a minimal model including three combined reactions. The new aspect in extension to earlier models is that we take into account the possible uptake and oxidation of the fermentation products. We examine the case where the cell can allocate protein on several enzymes in a varying distribution and model this by a linear programming problem in which the objective is to maximize the ATP production rate under different combinations of constraints on enzymes. Depending on the cost of reactions and limitation of the substrates, this leads to pure respiration, pure fermentation, and a mixture of respiration and fermentation. The model predicts that fermentation products are only oxidized when glucose is scarce or its uptake is severely limited.

  20. Linking the distribution of carbon isotope ratios in soil carbonates and speleothems to climate conditions in the past: A model for the dependence of respiration rate on soil moisture

    Science.gov (United States)

    Liu, Y.; Ibarra, D. E.; Winnick, M.; Caves Rugenstein, J. K.; Oster, J. L.; Druhan, J. L.

    2017-12-01

    The carbon isotope compositions (δ13C) of atmospheric CO2, C3-origin organic carbon, and limestone epikarst differ substantially, resulting in variable δ13C signatures recorded in secondary soil carbonates and speleothems which represent a mixture of these sources. Even though this signal has been widely used in paleoclimate studies, the extent to which carbonate δ13C is influenced by the dynamic response of organic carbon respiration rates to soil moisture variations has yet to be fully evaluated [1]. Soils that are rewetted after a prolonged drought commonly display a peak in respiration rate followed by relaxation to a lower steady state in both lab incubation experiments and field observations. This transient behavior, known as the Birch effect, has been extensively observed across a broad range of locations and soil types, and may generate more than 50% of the total respired CO2 in some ecosystems [2]. Here, we seek to identify the influence of the Birch effect on carbonate δ13C records based on a moisture-dependent modeling approach. We report compiled respiration rates of soils from the literature and fit these data as a function of soil moisture, before imposing exponential dampening with depth and applying the resulting function in a production-diffusion equation [3]. We then implement a mass balance calculation for the δ13C value of carbonate precipitated from a mixture of atmospheric and respired CO2, including mass-dependent fractionation associated with diffusive transport. Our results offer a novel prediction for depth-resolved carbonate δ13C as a function of soil moisture, and suggest that Birch effect signals may be recorded in soil carbonates and influence the magnitude of carbonate δ13C variations in speleothems. Thus, we illustrate a prediction for the range of carbonate δ13C recorded in terrestrial carbonates and suggest that differences in the range of carbonate δ13C may indicate changes in soil moisture variability, providing a new

  1. Accuracy of acoustic respiration rate monitoring in pediatric patients.

    Science.gov (United States)

    Patino, Mario; Redford, Daniel T; Quigley, Thomas W; Mahmoud, Mohamed; Kurth, C Dean; Szmuk, Peter

    2013-12-01

    Rainbow acoustic monitoring (RRa) utilizes acoustic technology to continuously and noninvasively determine respiratory rate from an adhesive sensor located on the neck. We sought to validate the accuracy of RRa, by comparing it to capnography, impedance pneumography, and to a reference method of counting breaths in postsurgical children. Continuous respiration rate data were recorded from RRa and capnography. In a subset of patients, intermittent respiration rate from thoracic impedance pneumography was also recorded. The reference method, counted respiratory rate by the retrospective analysis of the RRa, and capnographic waveforms while listening to recorded breath sounds were used to compare respiration rate of both capnography and RRa. Bias, precision, and limits of agreement of RRa compared with capnography and RRa and capnography compared with the reference method were calculated. Tolerance and reliability to the acoustic sensor and nasal cannula were also assessed. Thirty-nine of 40 patients (97.5%) demonstrated good tolerance of the acoustic sensor, whereas 25 of 40 patients (62.5%) demonstrated good tolerance of the nasal cannula. Intermittent thoracic impedance produced erroneous respiratory rates (>50 b·min(-1) from the other methods) on 47% of occasions. The bias ± SD and limits of agreement were -0.30 ± 3.5 b·min(-1) and -7.3 to 6.6 b·min(-1) for RRa compared with capnography; -0.1 ± 2.5 b·min(-1) and -5.0 to 5.0 b·min(-1) for RRa compared with the reference method; and 0.2 ± 3.4 b·min(-1) and -6.8 to 6.7 b·min(-1) for capnography compared with the reference method. When compared to nasal capnography, RRa showed good agreement and similar accuracy and precision but was better tolerated in postsurgical pediatric patients. © 2013 John Wiley & Sons Ltd.

  2. A novel hardware implementation for detecting respiration rate using photoplethysmography.

    Science.gov (United States)

    Prinable, Joseph; Jones, Peter; Thamrin, Cindy; McEwan, Alistair

    2017-07-01

    Asthma is a serious public health problem. Continuous monitoring of breathing may offer an alternative way to assess disease status. In this paper we present a novel hardware implementation for the capture and storage of a photoplethysmography (PPG) signal. The LED duty cycle was altered to determine the effect on respiratory rate accuracy. The oximeter was mounted to the left index finger of ten healthy volunteers. The breathing rate derived from the oximeter was validated against a nasal airflow sensor. The duty cycle of a pulse oximeter was changed between 5%, 10% and 25% at a sample rate of 500 Hz. A PPG signal and reference signal was captured for each duty cycle. The PPG signals were post processed in Matlab to derive a respiration rate using an existing Matlab toolbox. At a 25% duty cycle the RMSE was <;2 breaths per minute for the top performing algorithm. The RMSE increased to over 5 breaths per minute when the duty cycle was reduced to 5%. The power consumed by the hardware for a 5%, 10% and 25% duty cycle was 5.4 mW, 7.8 mW, and 15 mW respectively. For clinical assessment of respiratory rate, a RSME of <;2 breaths per minute is recommended. Further work is required to determine utility in asthma management. However for non-clinical applications such as fitness tracking, lower accuracy may be sufficient to allow a reduced duty cycle setting.

  3. Glycolysis Is Dynamic and Relates Closely to Respiration Rate in Stored Sugarbeet Roots

    Directory of Open Access Journals (Sweden)

    Clarice A. Megguer

    2017-05-01

    Full Text Available Although respiration is the principal cause of the loss of sucrose in postharvest sugarbeet (Beta vulgaris L., the internal mechanisms that control root respiration rate are unknown. Available evidence, however, indicates that respiration rate is likely to be controlled by the availability of respiratory substrates, and glycolysis has a central role in generating these substrates. To determine glycolytic changes that occur in sugarbeet roots after harvest and to elucidate relationships between glycolysis and respiration, sugarbeet roots were stored for up to 60 days, during which activities of glycolytic enzymes and concentrations of glycolytic substrates, intermediates, cofactors, and products were determined. Respiration rate was also determined, and relationships between respiration rate and glycolytic enzymes and metabolites were evaluated. Glycolysis was highly variable during storage, with 10 of 14 glycolytic activities and 14 of 17 glycolytic metabolites significantly altered during storage. Changes in glycolytic enzyme activities and metabolites occurred throughout the 60 day storage period, but were greatest in the first 4 days after harvest. Positive relationships between changes in glycolytic enzyme activities and root respiration rate were abundant, with 10 of 14 enzyme activities elevated when root respiration was elevated and 9 glycolytic activities static during periods of unchanging respiration rate. Major roles for pyruvate kinase and phosphofructokinase in the regulation of postharvest sugarbeet root glycolysis were indicated based on changes in enzymatic activities and concentrations of their substrates and products. Additionally, a strong positive relationship between respiration rate and pyruvate kinase activity was found indicating that downstream TCA cycle enzymes were unlikely to regulate or restrict root respiration in a major way. Overall, these results establish that glycolysis is not static during sugarbeet root

  4. Oxygen respiration rates of benthic foraminifera as measured with oxygen microsensors

    DEFF Research Database (Denmark)

    Geslin, E.; Risgaard-Petersen, N.; Lombard, Fabien

    2011-01-01

    of the foraminiferal specimens. The results show a wide range of oxygen respiration rates for the different species (from 0.09 to 5.27 nl cell−1 h−1) and a clear correlation with foraminiferal biovolume showed by the power law relationship: R = 3.98 10−3 BioVol0.88 where the oxygen respiration rate (R) is expressed......Oxygen respiration rates of benthic foraminifera are still badly known, mainly because they are difficult to measure. Oxygen respiration rates of seventeen species of benthic foraminifera were measured using microelectrodes and calculated on the basis of the oxygen fluxes measured in the vicinity...... groups (nematodes, copepods, ostracods, ciliates and flagellates) suggests that benthic foraminifera have a lower oxygen respiration rates per unit biovolume. The total contribution of benthic foraminifera to the aerobic mineralisation of organic matter is estimated for the studied areas. The results...

  5. Thermal effects on growth and respiration rates of the mayfly, Dolania americana (ephemeroptera)

    International Nuclear Information System (INIS)

    Harvey, R.S.

    1975-01-01

    The mayfly Dolania Americana, common in the sand of Upper Three Runs Creek, Savannah River Plant, was studied to determine the effects of seasonal changes in temperature on population growth rates and to determine the effects of slight elevations in water temperature on respiration rates of this benthic species. Growth of the population increased with stream temperature until peak emergence of adults in June and July. There was a strong inverse correlation between body weight and respiration rates of immature nymphs. Respiration rates at 2.5, 5, and 10 0 C above ambient creekwater temperatures were not significantly higher than those measured at ambient creekwater temperatures. (auth)

  6. [Design of Oxygen Saturation, Heart Rate, Respiration Rate Detection System Based on Smartphone of Android Operating System].

    Science.gov (United States)

    Zhu, Mingshan; Zeng, Bixin

    2015-03-01

    In this paper, we designed an oxygen saturation, heart rate, respiration rate monitoring system based on smartphone of android operating system, physiological signal acquired by MSP430 microcontroller and transmitted by Bluetooth module.

  7. EXPERIMENTAL SUBSTANTIATION OF PERMEABILIZED HEPATOCYTES MODEL FOR INVESTIGATION OF MITOCHONDRIA IN SITU RESPIRATION.

    Science.gov (United States)

    Merlavsky, V M; Manko, B O; Ikkert, O V; Manko, V V

    2015-01-01

    To verify experimentally the model of permeabilized hepatocytes, the degree of cell permeability was assessed using trypan blue and polarographycally determined cell respiration rate upon succinate (0.35 mM) and a-ketoglutarate (1 mM) oxidation. Oxidative phosphorylation was stimulated by ADP (750 μM). Hepatocyte permeabilization depends on digitonin concentraion in medium and on the number of cells in suspension. Thus, the permeabilization of 0.9-1.7 million cells/ml was completed by 25 μg/ml of digitonin, permeabilization of 2.0-3.0 million cells/ml--by 50 μg/ml of digitonin and permeabilization of 4.0-5.6 million cells/ml--by 100 μg/ml. Thus, the higher is the suspension density, the higher digitonin concentration is required. Treatment of hepatocytes with digitonin resulted in a decrease of endogenous respiration rate to a minimum upon 20-22 μg of digitonin per 1 million cells. Supplementation of permeabilized hepatocytes with α-ketoglutarate maintained stable respiration rate, on the level higher than endogenous respiration at the corresponding digitonin concentration, unlike the intact cells. Respiration rate of permeabilized hepatocytes at the simultaneous addition of α-ketoglutarate and ADP increased to the level of intact cell respiration, irrespective of digitonin concentration. Addition of solely succinate and especially succinate plus ADP markedly intensified the respiration of permeabilized hepatocytes to the level higher than that of intact cells. The dependence of succinate-stimulated respiration on digitonin concentration reached maximum at 20-22 αg of digitonin per 1 million cells. Optimal ratio of digitonin amount and the cell number in suspension is expected to be different in various tissues.

  8. Influence of forced respiration on nonlinear dynamics in heart rate variability

    DEFF Research Database (Denmark)

    Kanters, J K; Højgaard, M V; Agner, E

    1997-01-01

    Although it is doubtful whether the normal sinus rhythm can be described as low-dimensional chaos, there is evidence for inherent nonlinear dynamics and determinism in time series of consecutive R-R intervals. However, the physiological origin for these nonlinearities is unknown. The aim...... with a metronome set to 12 min(-1). Nonlinear dynamics were measured as the correlation dimension and the nonlinear prediction error. Complexity expressed as correlation dimension was unchanged from normal respiration, 9.1 +/- 0.5, compared with forced respiration, 9.3 +/- 0.6. Also, nonlinear determinism...... expressed as the nonlinear prediction error did not differ between spontaneous respiration, 32.3 +/- 3.4 ms, and forced respiration, 31.9 +/- 5.7. It is concluded that the origin of the nonlinear dynamics in heart rate variability is not a nonlinear input from the respiration into the cardiovascular...

  9. Airborne release fractions/rates and respirable fractions for nonreactor nuclear facilities. Volume 2, Appendices

    International Nuclear Information System (INIS)

    1994-12-01

    This document contains compiled data from the DOE Handbook on Airborne Release Fractions/Rates and Respirable Fractions for Nonreactor Nuclear facilities. Source data and example facilities utilized, such as the Plutonium Recovery Facility, are included

  10. Landscape Influences on Potential Soil Respiration Rates in a Forested Watershed of Southeastern Kentucky

    Science.gov (United States)

    Amanda C. Abnee; James A. Thompson; Randall K. Kolka; Elisa M. D' Angelo; Mark S. Coyne

    2004-01-01

    Soil respiration measurements conducted in the laboratory have been shown to be related to temperature and moisture, with maximum rates at soil temperatures between 25 and 40°C and soil moisture between -0.01 and -0.10 MPa. A preliminary study using forest soils from eastern Kentucky supported the previous research with soil respiration rates greater at 25°C than at 15...

  11. Macromolecular Rate Theory (MMRT) Provides a Thermodynamics Rationale to Underpin the Convergent Temperature Response in Plant Leaf Respiration

    Science.gov (United States)

    Liang, L. L.; Arcus, V. L.; Heskel, M.; O'Sullivan, O. S.; Weerasinghe, L. K.; Creek, D.; Egerton, J. J. G.; Tjoelker, M. G.; Atkin, O. K.; Schipper, L. A.

    2017-12-01

    Temperature is a crucial factor in determining the rates of ecosystem processes such as leaf respiration (R) - the flux of plant respired carbon dioxide (CO2) from leaves to the atmosphere. Generally, respiration rate increases exponentially with temperature as modelled by the Arrhenius equation, but a recent study (Heskel et al., 2016) showed a universally convergent temperature response of R using an empirical exponential/polynomial model whereby the exponent in the Arrhenius model is replaced by a quadratic function of temperature. The exponential/polynomial model has been used elsewhere to describe shoot respiration and plant respiration. What are the principles that underlie these empirical observations? Here, we demonstrate that macromolecular rate theory (MMRT), based on transition state theory for chemical kinetics, is equivalent to the exponential/polynomial model. We re-analyse the data from Heskel et al. 2016 using MMRT to show this equivalence and thus, provide an explanation based on thermodynamics, for the convergent temperature response of R. Using statistical tools, we also show the equivalent explanatory power of MMRT when compared to the exponential/polynomial model and the superiority of both of these models over the Arrhenius function. Three meaningful parameters emerge from MMRT analysis: the temperature at which the rate of respiration is maximum (the so called optimum temperature, Topt), the temperature at which the respiration rate is most sensitive to changes in temperature (the inflection temperature, Tinf) and the overall curvature of the log(rate) versus temperature plot (the so called change in heat capacity for the system, ). The latter term originates from the change in heat capacity between an enzyme-substrate complex and an enzyme transition state complex in enzyme-catalysed metabolic reactions. From MMRT, we find the average Topt and Tinf of R are 67.0±1.2 °C and 41.4±0.7 °C across global sites. The average curvature (average

  12. Temperature dependence of bulk respiration of crop stands. Measurement and model fitting

    International Nuclear Information System (INIS)

    Tani, Takashi; Arai, Ryuji; Tako, Yasuhiro

    2007-01-01

    The objective of the present study was to examine whether the temperature dependence of respiration at a crop-stand scale could be directly represented by an Arrhenius function that was widely used for representing the temperature dependence of leaf respiration. We determined temperature dependences of bulk respiration of monospecific stands of rice and soybean within a range of the air temperature from 15 to 30degC using large closed chambers. Measured responses of respiration rates of the two stands were well fitted by the Arrhenius function (R 2 =0.99). In the existing model to assess the local radiological impact of the anthropogenic carbon-14, effects of the physical environmental factors on photosynthesis and respiration of crop stands are not taken into account for the calculation of the net amount of carbon per cultivation area in crops at harvest which is the crucial parameter for the estimation of the activity concentration of carbon-14 in crops. Our result indicates that the Arrhenius function is useful for incorporating the effect of the temperature on respiration of crop stands into the model which is expected to contribute to a more realistic estimate of the activity concentration of carbon-14 in crops. (author)

  13. Continuous daylight in the high-Arctic summer supports high plankton respiration rates compared to those supported in the dark

    KAUST Repository

    Mesa, Elena; Delgado-Huertas, Antonio; Carrillo-de-Albornoz, Paloma; Garcí a-Corral, Lara S.; Sanz-Martí n, Marina; Wassmann, Paul; Reigstad, Marit; Sejr, Mikael; Dalsgaard, Tage; Duarte, Carlos M.

    2017-01-01

    Plankton respiration rate is a major component of global CO2 production and is forecasted to increase rapidly in the Arctic with warming. Yet, existing assessments in the Arctic evaluated plankton respiration in the dark. Evidence that plankton

  14. Respiration rate of stream insects measured in situ along a large altitude range

    DEFF Research Database (Denmark)

    Rostgaard, S.; Jacobsen, D.

    2005-01-01

    Field studies of respiration in stream insects are few in comparison with laboratory studies. To evaluate the influence of temperature and oxygen along altitudinal gradients we measured the respiration rate of fully acclimatized larval Trichoptera, Plecoptera and Ephemeroptera under similar field...... at 100 and 50% oxygen saturation indicated that highland animals reduced their oxygen uptake more than their counterparts in the lowland when oxygen availability decreased. The temperature response of respiration calculated between the insect assemblages at different altitudes showed a mean assemblage Q...

  15. Influence of gamma irradiation, cold storage and pulsing on post harvest life and respiration rate of 'golden gate' cut roses

    International Nuclear Information System (INIS)

    Palanikumar, S.; Vinod Kumar; Bhattacharjee, S.K.; Pal, Madan

    2003-01-01

    Gamma irradiation at 0.025 kGy increased the respiration rate of 'Golden Gate' cut roses. The irradiation followed by cold storage (at 4 deg C) brought down the respiration rate after storage duration of 3 days. The respiration rate was found maximum in the sucrose (3% ) pulsed flowers immediately after pulsing. However, the rate of respiration is decreased in all the treatments. The irradiated flowers recorded lowest amount of respiration at senescence and the vase life was maximum in these flowers. (author)

  16. Data compilation of respiration, feeding, and growth rates of marine pelagic organisms

    DEFF Research Database (Denmark)

    2013-01-01

    's adaptation to the environment, with consequently less universal mass scaling properties. Data on body mass, maximum ingestion and clearance rates, respiration rates and maximum growth rates of animals living in the ocean epipelagic were compiled from the literature, mainly from original papers but also from...

  17. Soil respiration patterns and rates at three Taiwanese forest plantations: dependence on elevation, temperature, precipitation, and litterfall

    OpenAIRE

    Huang, Yu-Hsuan; Hung, Chih-Yu; Lin, I-Rhy; Kume, Tomonori; Menyailo, Oleg V.; Cheng, Chih-Hsin

    2017-01-01

    Background Soil respiration contributes to a large quantity of carbon emissions in the forest ecosystem. In this study, the soil respiration rates at three Taiwanese forest plantations (two lowland and one mid-elevation) were investigated. We aimed to determine how soil respiration varies between lowland and mid-elevation forest plantations and identify the relative importance of biotic and abiotic factors affecting soil respiration. Results The results showed that the temporal patterns of so...

  18. Separating the effect of respiration from the heart rate variability for cases of constant harmonic breathing

    Directory of Open Access Journals (Sweden)

    Kircher Michael

    2015-09-01

    Full Text Available Heart Rate Variability studies are a known measure for the autonomous control of the heart rate. In special situations, its interpretation can be ambiguous, since the respiration has a major influence on the heart rate variability. For this reason it has often been proposed to measure Heart Rate Variability, while the subjects are breathing at a constant respiration rate. That way the spectral influence of the respiration is known. In this work we propose to remove this constant respiratory influence from the heart rate and the Heart Rate Variability parameters to gain respiration free autonomous controlled heart rate signal. The spectral respiratory component in the heart rate signal is detected and characterized. Subsequently the respiratory effect on Heart Rate Variability is removed using spectral filtering approaches, such as the Notch filter or the Raised Cosine filter. As a result new decoupled Heart Variability parameters are gained, which could lead to new additional interpretations of the autonomous control of the heart rate.

  19. Relationship between oxygen concentration, respiration and filtration rate in blue mussel Mytilus edulis

    Science.gov (United States)

    Tang, Baojun; Riisgård, Hans Ulrik

    2018-03-01

    The large water-pumping and particle-capturing gills of the filter-feeding blue mussel Mytilus edulis are oversized for respiratory purposes. Consequently, the oxygen uptake rate of the mussel has been suggested to be rather insensitive to decreasing oxygen concentrations in the ambient water, since the diffusion rate of oxygen from water flowing through the mussel determines oxygen uptake. We tested this hypothesis by measuring the oxygen uptake in mussels exposed to various oxygen concentrations. These concentrations were established via N2-bubbling of the water in a respiration chamber with mussels fed algal cells to stimulate fully opening of the valves. It was found that mussels exposed to oxygen concentrations decreasing from 9 to 2 mg O2/L resulted in a slow but significant reduction in the respiration rate, while the filtration rate remained high and constant. Thus, a decrease of oxygen concentration by 78% only resulted in a 25% decrease in respiration rate. However, at oxygen concentrations below 2 mg O2/L M. edulis responded by gradually closing its valves, resulting in a rapid decrease of filtration rate, concurrent with a rapid reduction of respiration rate. These observations indicated that M. edulis is no longer able to maintain its normal aerobic metabolism at oxygen concentration below 2 mg O2/L, and there seems to be an energy-saving mechanism in bivalve molluscs to strongly reduce their activity when exposed to low oxygen conditions.

  20. Effects of elevated CO2 leaf diets on gypsy moth (Lepidoptera: Lymantriidae) respiration rates.

    Science.gov (United States)

    Foss, Anita R; Mattson, William J; Trier, Terry M

    2013-06-01

    Elevated levels of CO2 affect plant growth and leaf chemistry, which in turn can alter host plant suitability for insect herbivores. We examined the suitability of foliage from trees grown from seedlings since 1997 at Aspen FACE as diet for the gypsy moth (Lymantria dispar L.) Lepidoptera: Lymantriidae: paper birch (Betula papyrifera Marshall) in 2004-2005, and trembling aspen (Populus tremuloides Michaux) in 2006-2007, and measured consequent effects on larval respiration. Leaves were collected for diet and leaf chemistry (nutritional and secondary compound proxies) from trees grown under ambient (average 380 ppm) and elevated CO2 (average 560 ppm) conditions. Elevated CO2 did not significantly alter birch or aspen leaf chemistry compared with ambient levels with the exception that birch percent carbon in 2004 and aspen moisture content in 2006 were significantly lowered. Respiration rates were significantly higher (15-59%) for larvae reared on birch grown under elevated CO2 compared with ambient conditions, but were not different on two aspen clones, until larvae reached the fifth instar, when those consuming elevated CO2 leaves on clone 271 had lower (26%) respiration rates, and those consuming elevated CO2 leaves on clone 216 had higher (36%) respiration rates. However, elevated CO2 had no apparent effect on the respiration rates of pupae derived from larvae fed either birch or aspen leaves. Higher respiration rates for larvae fed diets grown under ambient or elevated CO2 demonstrates their lower efficiency of converting chemical energy of digested food stuffs extracted from such leaves into their biosynthetic processes.

  1. Spectral analysis of time series of events: effect of respiration on heart rate in neonates

    International Nuclear Information System (INIS)

    Van Drongelen, Wim; Williams, Amber L; Lasky, Robert E

    2009-01-01

    Certain types of biomedical processes such as the heart rate generator can be considered as signals that are sampled by the occurring events, i.e. QRS complexes. This sampling property generates problems for the evaluation of spectral parameters of such signals. First, the irregular occurrence of heart beats creates an unevenly sampled data set which must either be pre-processed (e.g. by using trace binning or interpolation) prior to spectral analysis, or analyzed with specialized methods (e.g. Lomb's algorithm). Second, the average occurrence of events determines the Nyquist limit for the sampled time series. Here we evaluate different types of spectral analysis of recordings of neonatal heart rate. Coupling between respiration and heart rate and the detection of heart rate itself are emphasized. We examine both standard and data adaptive frequency bands of heart rate signals generated by models of coupled oscillators and recorded data sets from neonates. We find that an important spectral artifact occurs due to a mirror effect around the Nyquist limit of half the average heart rate. Further we conclude that the presence of respiratory coupling can only be detected under low noise conditions and if a data-adaptive respiratory band is used

  2. The effects of operational conditions on the respiration rate of Tubificidae.

    Directory of Open Access Journals (Sweden)

    Juqing Lou

    Full Text Available Tubificidae is often used in the wastewater treatment systems to minimize the sludge production because it can be fed on the activated sludge. The process conditions have effect on the growth, reproduction, and sludge reduction efficiency of Tubificidae. The effects of the water quality, density of worms, pH, temperature and dissolved oxygen (DO concentration on the respiration rate of Tubificidae were investigated to determine the optimal conditions for the growth and metabolism of the worms and reveal the mechanisms involving the efficient sludge reduction in terms of these conditions. It was observed that the respiration rate was highest in the water discharged from an ecosystem that included symbiotic Tubificidae and microbes and was lowest in distilled water. Considering density of the worms, the highest rate was 81.72±5.12 mg O2/g(dry weight·h·L with 0.25 g (wet weight of worms in 1 L test flask. The maximum Tubificidae respiration rate was observed at a pH of 8.0±0.05, a rate that was more than twice as high as those observed at other pH values. The respiration rate increased in the temperature range of ∼8°C-22°C, whereas the rate declined in the temperature range of ∼22°C-30°C. The respiration rate of Tubificidae was very high for DO range of ∼3.5-4.5 mg/L, and the rates were relatively low for out of this DO range. The results of this study revealed the process conditions which influenced the growth, and reproduction of Tubificidae and sludge reduction at a microscopic level, which could be a theoretical basis for the cultivation and application of Tubificidae in wastewater treatment plants.

  3. A combined electrochemical and optical trapping platform for measuring single cell respiration rates at electrode interfaces

    International Nuclear Information System (INIS)

    Gross, Benjamin J.; El-Naggar, Mohamed Y.

    2015-01-01

    Metal-reducing bacteria gain energy by extracellular electron transfer to external solids, such as naturally abundant minerals, which substitute for oxygen or the other common soluble electron acceptors of respiration. This process is one of the earliest forms of respiration on earth and has significant environmental and technological implications. By performing electron transfer to electrodes instead of minerals, these microbes can be used as biocatalysts for conversion of diverse chemical fuels to electricity. Understanding such a complex biotic-abiotic interaction necessitates the development of tools capable of probing extracellular electron transfer down to the level of single cells. Here, we describe an experimental platform for single cell respiration measurements. The design integrates an infrared optical trap, perfusion chamber, and lithographically fabricated electrochemical chips containing potentiostatically controlled transparent indium tin oxide microelectrodes. Individual bacteria are manipulated using the optical trap and placed on the microelectrodes, which are biased at a suitable oxidizing potential in the absence of any chemical electron acceptor. The potentiostat is used to detect the respiration current correlated with cell-electrode contact. We demonstrate the system with single cell measurements of the dissimilatory-metal reducing bacterium Shewanella oneidensis MR-1, which resulted in respiration currents ranging from 15 fA to 100 fA per cell under our measurement conditions. Mutants lacking the outer-membrane cytochromes necessary for extracellular respiration did not result in any measurable current output upon contact. In addition to the application for extracellular electron transfer studies, the ability to electronically measure cell-specific respiration rates may provide answers for a variety of fundamental microbial physiology questions

  4. A combined electrochemical and optical trapping platform for measuring single cell respiration rates at electrode interfaces.

    Science.gov (United States)

    Gross, Benjamin J; El-Naggar, Mohamed Y

    2015-06-01

    Metal-reducing bacteria gain energy by extracellular electron transfer to external solids, such as naturally abundant minerals, which substitute for oxygen or the other common soluble electron acceptors of respiration. This process is one of the earliest forms of respiration on earth and has significant environmental and technological implications. By performing electron transfer to electrodes instead of minerals, these microbes can be used as biocatalysts for conversion of diverse chemical fuels to electricity. Understanding such a complex biotic-abiotic interaction necessitates the development of tools capable of probing extracellular electron transfer down to the level of single cells. Here, we describe an experimental platform for single cell respiration measurements. The design integrates an infrared optical trap, perfusion chamber, and lithographically fabricated electrochemical chips containing potentiostatically controlled transparent indium tin oxide microelectrodes. Individual bacteria are manipulated using the optical trap and placed on the microelectrodes, which are biased at a suitable oxidizing potential in the absence of any chemical electron acceptor. The potentiostat is used to detect the respiration current correlated with cell-electrode contact. We demonstrate the system with single cell measurements of the dissimilatory-metal reducing bacterium Shewanella oneidensis MR-1, which resulted in respiration currents ranging from 15 fA to 100 fA per cell under our measurement conditions. Mutants lacking the outer-membrane cytochromes necessary for extracellular respiration did not result in any measurable current output upon contact. In addition to the application for extracellular electron transfer studies, the ability to electronically measure cell-specific respiration rates may provide answers for a variety of fundamental microbial physiology questions.

  5. A combined electrochemical and optical trapping platform for measuring single cell respiration rates at electrode interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Gross, Benjamin J. [Department of Physics and Astronomy, University of Southern California, 920 Bloom Walk, Los Angeles, California 90089-0484 (United States); El-Naggar, Mohamed Y., E-mail: mnaggar@usc.edu [Department of Physics and Astronomy, University of Southern California, 920 Bloom Walk, Los Angeles, California 90089-0484 (United States); Molecular and Computational Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, California 90089-0484 (United States); Department of Chemistry, University of Southern California, Los Angeles, California 90089-0484 (United States)

    2015-06-15

    Metal-reducing bacteria gain energy by extracellular electron transfer to external solids, such as naturally abundant minerals, which substitute for oxygen or the other common soluble electron acceptors of respiration. This process is one of the earliest forms of respiration on earth and has significant environmental and technological implications. By performing electron transfer to electrodes instead of minerals, these microbes can be used as biocatalysts for conversion of diverse chemical fuels to electricity. Understanding such a complex biotic-abiotic interaction necessitates the development of tools capable of probing extracellular electron transfer down to the level of single cells. Here, we describe an experimental platform for single cell respiration measurements. The design integrates an infrared optical trap, perfusion chamber, and lithographically fabricated electrochemical chips containing potentiostatically controlled transparent indium tin oxide microelectrodes. Individual bacteria are manipulated using the optical trap and placed on the microelectrodes, which are biased at a suitable oxidizing potential in the absence of any chemical electron acceptor. The potentiostat is used to detect the respiration current correlated with cell-electrode contact. We demonstrate the system with single cell measurements of the dissimilatory-metal reducing bacterium Shewanella oneidensis MR-1, which resulted in respiration currents ranging from 15 fA to 100 fA per cell under our measurement conditions. Mutants lacking the outer-membrane cytochromes necessary for extracellular respiration did not result in any measurable current output upon contact. In addition to the application for extracellular electron transfer studies, the ability to electronically measure cell-specific respiration rates may provide answers for a variety of fundamental microbial physiology questions.

  6. Analyses of Heart Rate, Respiration and Cardiorespiratory Coupling in Patients with Schizophrenia

    Directory of Open Access Journals (Sweden)

    Steffen Schulz

    2015-01-01

    Full Text Available Schizophrenia is a severe mental disorder associated with a significantly increased cardiovascular mortality rate. However, the underlying mechanisms leading to this cardiovascular disease (CVD are not fully known. Therefore, the objective of this study was to characterize the cardiorespiratory influence by investigating heart rate, respiration and the causal strength and direction of cardiorespiratory coupling (CRC, based mainly on entropy measures. We investigated 23 non-medicated patients with schizophrenia (SZ, comparing them to 23 age- and gender-matched healthy controls (CO. A significantly reduced complexity was found for the heart rate and a significantly increased complexity in respiration and CRC in SZ patients when compared to corresponding measurements from CO (p < 0.001. CRC analyses revealed a clear coupling, with a driver-responder relationship from respiration to heart rate in SZ patients. Moreover, a slight driver-responder relationship from heart rate to respiration could be recognized. These findings lead to the assumption that SZ should be considered to be a high-risk group for CVD. We hypothesize that the varying cardiorespiratory regulation contributes to the increased risk for cardiac mortality. Therefore, regular monitoring of the cardiorespiratory status of SZ is suggested to identify autonomic regulation impairment at an early stage—to develop timely and effective treatment and intervention strategies.

  7. Temperature sensitivity of soil respiration rates enhanced by microbial community response.

    Science.gov (United States)

    Karhu, Kristiina; Auffret, Marc D; Dungait, Jennifer A J; Hopkins, David W; Prosser, James I; Singh, Brajesh K; Subke, Jens-Arne; Wookey, Philip A; Agren, Göran I; Sebastià, Maria-Teresa; Gouriveau, Fabrice; Bergkvist, Göran; Meir, Patrick; Nottingham, Andrew T; Salinas, Norma; Hartley, Iain P

    2014-09-04

    Soils store about four times as much carbon as plant biomass, and soil microbial respiration releases about 60 petagrams of carbon per year to the atmosphere as carbon dioxide. Short-term experiments have shown that soil microbial respiration increases exponentially with temperature. This information has been incorporated into soil carbon and Earth-system models, which suggest that warming-induced increases in carbon dioxide release from soils represent an important positive feedback loop that could influence twenty-first-century climate change. The magnitude of this feedback remains uncertain, however, not least because the response of soil microbial communities to changing temperatures has the potential to either decrease or increase warming-induced carbon losses substantially. Here we collect soils from different ecosystems along a climate gradient from the Arctic to the Amazon and investigate how microbial community-level responses control the temperature sensitivity of soil respiration. We find that the microbial community-level response more often enhances than reduces the mid- to long-term (90 days) temperature sensitivity of respiration. Furthermore, the strongest enhancing responses were observed in soils with high carbon-to-nitrogen ratios and in soils from cold climatic regions. After 90 days, microbial community responses increased the temperature sensitivity of respiration in high-latitude soils by a factor of 1.4 compared to the instantaneous temperature response. This suggests that the substantial carbon stores in Arctic and boreal soils could be more vulnerable to climate warming than currently predicted.

  8. Monitoring biodegradation of diesel fuel in bioventing processes using in situ respiration rate.

    Science.gov (United States)

    Lee, T H; Byun, I G; Kim, Y O; Hwang, I S; Park, T J

    2006-01-01

    An in situ measuring system of respiration rate was applied for monitoring biodegradation of diesel fuel in a bioventing process for bioremediation of diesel contaminated soil. Two laboratory-scale soil columns were packed with 5 kg of soil that was artificially contaminated by diesel fuel as final TPH (total petroleum hydrocarbon) concentration of 8,000 mg/kg soil. Nutrient was added to make a relative concentration of C:N:P = 100:10:1. One soil column was operated with continuous venting mode, and the other one with intermittent (6 h venting/6 h rest) venting mode. On-line O2 and CO2 gas measuring system was applied to measure O2 utilisation and CO2 production during biodegradation of diesel for 5 months. Biodegradation rate of TPH was calculated from respiration rate measured by the on-line gas measuring system. There were no apparent differences between calculated biodegradation rates from two columns with different venting modes. The variation of biodegradation rates corresponded well with trend of the remaining TPH concentrations comparing other biodegradation indicators, such as C17/pristane and C18/phytane ratio, dehydrogenase activity, and the ratio of hydrocarbon utilising bacteria to total heterotrophic bacteria. These results suggested that the on-line measuring system of respiration rate would be applied to monitoring biodegradation rate and to determine the potential applicability of bioventing process for bioremediation of oil contaminated soil.

  9. Respiration rate detection based on intensity modulation using plastic optical fiber

    Science.gov (United States)

    Anwar, Zawawi Mohd; Ziran Nurul Sufia, Nor; Hadi, Manap

    2017-11-01

    This paper presents the implementation of respiration rate measurement via a simple intensity-based optical fiber sensor using optical fiber technology. The breathing rate is measured based on the light intensity variation due to the longitudinal gap changes between two separated fibers. In order to monitor the breathing rate continuously, the output from the photodetector conditioning circuit is connected to a low-cost Arduino kit. At the sensing point, two optical fiber cables are positioned in series with a small gap and fitted inside a transparent plastic tube. To ensure smooth movement of the fiber during inhale and exhale processes as well as to maintain the gap of the fiber during idle condition, the fiber is attached firmly to a stretchable bandage. This study shows that this simple fiber arrangement can be applied to detect respiration activity which might be critical for patient monitoring.

  10. Respiration rate detection based on intensity modulation using plastic optical fiber

    Directory of Open Access Journals (Sweden)

    Mohd Anwar Zawawi

    2017-01-01

    Full Text Available This paper presents the implementation of respiration rate measurement via a simple intensity-based optical fiber sensor using optical fiber technology. The breathing rate is measured based on the light intensity variation due to the longitudinal gap changes between two separated fibers. In order to monitor the breathing rate continuously, the output from the photodetector conditioning circuit is connected to a low-cost Arduino kit. At the sensing point, two optical fiber cables are positioned in series with a small gap and fitted inside a transparent plastic tube. To ensure smooth movement of the fiber during inhale and exhale processes as well as to maintain the gap of the fiber during idle condition, the fiber is attached firmly to a stretchable bandage. This study shows that this simple fiber arrangement can be applied to detect respiration activity which might be critical for patient monitoring.

  11. Implementing a Nitrogen-Based Model for Autotrophic Respiration Using Satellite and Field Observations

    Science.gov (United States)

    Choudhury, Bhaskar J.; Houser, Paul (Technical Monitor)

    2001-01-01

    The rate of carbon accumulation by terrestrial plant communities in a process-level, mechanistic modeling is the difference of the rate of gross photosynthesis by a canopy (A(sub g)) and autotrophic respiration (R) of the stand. Observations for different biomes often show that R to be a large and variable fraction of A(sub g), ca. 35% to 75%, although other studies suggest the ratio of R and A(sub g) to be less variable. Here, R has been calculated according to the two compartment model as being the sum of maintenance and growth components. The maintenance respiration of foliage and living fine roots for different biomes has been determined objectively from observed nitrogen content of these organs. The sapwood maintenance respiration is based on pipe theory, and checked against an independently derived equation considering sapwood biomass and its maintenance coefficient. The growth respiration has been calculated from the difference of A(sub g) and maintenance respiration. The A(sub g) is obtained as the product of biome-specific radiation use efficiency for gross photosynthesis under unstressed conditions and intercepted photosynthetically active radiation, and adjusted for stress. Calculations have been done using satellite and ground observations for 36 consecutive months (1987-1989) over large contiguous areas (ca. 10(exp 5) sq km) of boreal forests, crop land, temperate deciduous forest, temperate grassland, tropical deciduous forest, tropical evergreen forest, tropical savanna, and tundra. The ratio of annual respiration and gross photosynthesis, (R/A(sub g)), is found to be 0.5-0.6 for temperate and cold adopted biome areas, but somewhat higher for tropical biome areas (0.6-0.7). Interannual variation of the fluxes is found to be generally less than 15%. Calculated fluxes are compared with observations and several previous estimates. Results of sensitivity analysis are presented for uncertainties in parameterization and input data. It is found that

  12. Microbiopsies versus Bergström needle for skeletal muscle sampling: impact on maximal mitochondrial respiration rate.

    Science.gov (United States)

    Isner-Horobeti, M E; Charton, A; Daussin, F; Geny, B; Dufour, S P; Richard, R

    2014-05-01

    Microbiopsies are increasingly used as an alternative to the standard Bergström technique for skeletal muscle sampling. The potential impact of these two different procedures on mitochondrial respiration rate is unknown. The objective of this work was to compare microbiopsies versus Bergström procedure on mitochondrial respiration in skeletal muscle. 52 vastus lateralis muscle samples were obtained from 13 anesthetized pigs, either with a Bergström [6 gauges (G)] needle or with microbiopsy needles (12, 14, 18G). Maximal mitochondrial respiration (V GM-ADP) was assessed using an oxygraphic method on permeabilized fibers. The weight of the muscle samples and V GM-ADP decreased with the increasing gauge of the needles. A positive nonlinear relationship was observed between the weight of the muscle sample and the level of maximal mitochondrial respiration (r = 0.99, p respiration (r = 0.99, p respiration compared to the standard Bergström needle.Therefore, the higher the gauge (i.e. the smaller the size) of the microbiopsy needle, the lower is the maximal rate of respiration. Microbiopsies of skeletal muscle underestimate the maximal mitochondrial respiration rate, and this finding needs to be highlighted for adequate interpretation and comparison with literature data.

  13. Respiration rate and ethylene production of fresh cut lettuce as affected by cutting grade

    Directory of Open Access Journals (Sweden)

    J. MARTÍNEZ

    2008-12-01

    Full Text Available For designing optimal polymeric films for modified atmosphere packaging of whole heads as well as for minimally fresh processed (fresh-cut Iceberg lettuce ‘Coolguard’, the effect of several cutting grades on respiration rate (RR and ethylene production at 5ºC was studied. According to common industrial practices cutting grades less than 0.5 cm, between 0.5 and 1 cm, and 2 cm length were selected. Results from four experiments were compared to those obtained for whole heads in which a homogenous range of 6 to 8 ml CO2 kg-1 h-1 in RR was found. Compared to whole heads, in fresh-cut lettuce the RR was 2-fold higher. The lowest cutting grade showed the highest respiration rate, and no significant differences in RR among lettuce pieces of intermediate and the highest grades were found. No ethylene production was detected in whole heads, while in minimally processed lettuce pieces only traces were found. For avoiding risks of anaerobic respiration and excessive CO2 levels within packages containing fresh-cut lettuce pieces lower than 0.5 cm length, films with relatively high O2 permeability like standard polypropylene or low-density polyethylene must be selected.;

  14. Relative rates of nitric oxide and nitrous oxide production by nitrifiers, denitrifiers, and nitrate respirers

    Science.gov (United States)

    Anderson, I. C.; Levine, J. S.

    1986-01-01

    An account is given of the atmospheric chemical and photochemical effects of biogenic nitric and nitrous oxide emissions. The magnitude of the biogenic emission of NO is noted to remain uncertain. Possible soil sources of NO and N2O encompass nitrification by autotropic and heterotropic nitrifiers, denitrification by nitrifiers and denitrifiers, nitrate respiration by fermenters, and chemodenitrification. Oxygen availability is the primary determinant of these organisms' relative rates of activity. The characteristics of this major influence are presently investigated in light of the effect of oxygen partial pressure on NO and N2O production by a wide variety of common soil-nitrifying, denitrifying, and nitrate-respiring bacteria under laboratory conditions. The results obtained indicate that aerobic soils are primary sources only when there is sufficient moisture to furnish anaerobic microsites for denitrification.

  15. Measuring temperature dependence of soil respiration: importance of incubation time, soil type, moisture content and model fits

    Science.gov (United States)

    Schipper, L. A.; Robinson, J.; O'Neill, T.; Ryburn, J.; Arcus, V. L.

    2015-12-01

    Developing robust models of the temperature response and sensitivity of soil respiration is critical for determining changes carbon cycling in response to climate change and at daily to annual time scales. Currently, approaches for measuring temperature dependence of soil respiration generally use long incubation times (days to weeks and months) at a limited number of incubation temperatures. Long incubation times likely allow thermal adaptation by the microbial population so that results are poorly representative of in situ soil responses. Additionally, too few incubation temperatures allows for the fit and justification of many different predictive equations, which can lead to inaccuracies when used for carbon budgeting purposes. We have developed a method to rapidly determine the response of soil respiration rate to wide range of temperatures. An aluminium block with 44 sample slots is heated at one end and cooled at the other to give a temperature gradient from 0 to 55°C at about one degree increments. Soil respiration is measured within 5 hours to minimise the possibility of thermal adaptation. We have used this method to demonstrate the similarity of temperature sensitivity of respiration for different soils from the same location across seasons. We are currently testing whether long-term (weeks to months) incubation alter temperature response and sensitivity that occurs in situ responses. This method is also well suited for determining the most appropriate models of temperature dependence and sensitivity of soil respiration (including macromolecular rate theory MMRT). With additional testing, this method is expected to be a more reliable method of measuring soil respiration rate for soil quality and modelling of soil carbon processes.

  16. Modeling temporal and large-scale spatial variability of soil respiration from soil water availability, temperature and vegetation productivity indices

    Science.gov (United States)

    Reichstein, Markus; Rey, Ana; Freibauer, Annette; Tenhunen, John; Valentini, Riccardo; Banza, Joao; Casals, Pere; Cheng, Yufu; Grünzweig, Jose M.; Irvine, James; Joffre, Richard; Law, Beverly E.; Loustau, Denis; Miglietta, Franco; Oechel, Walter; Ourcival, Jean-Marc; Pereira, Joao S.; Peressotti, Alessandro; Ponti, Francesca; Qi, Ye; Rambal, Serge; Rayment, Mark; Romanya, Joan; Rossi, Federica; Tedeschi, Vanessa; Tirone, Giampiero; Xu, Ming; Yakir, Dan

    2003-12-01

    Field-chamber measurements of soil respiration from 17 different forest and shrubland sites in Europe and North America were summarized and analyzed with the goal to develop a model describing seasonal, interannual and spatial variability of soil respiration as affected by water availability, temperature, and site properties. The analysis was performed at a daily and at a monthly time step. With the daily time step, the relative soil water content in the upper soil layer expressed as a fraction of field capacity was a good predictor of soil respiration at all sites. Among the site variables tested, those related to site productivity (e.g., leaf area index) correlated significantly with soil respiration, while carbon pool variables like standing biomass or the litter and soil carbon stocks did not show a clear relationship with soil respiration. Furthermore, it was evidenced that the effect of precipitation on soil respiration stretched beyond its direct effect via soil moisture. A general statistical nonlinear regression model was developed to describe soil respiration as dependent on soil temperature, soil water content, and site-specific maximum leaf area index. The model explained nearly two thirds of the temporal and intersite variability of soil respiration with a mean absolute error of 0.82 μmol m-2 s-1. The parameterized model exhibits the following principal properties: (1) At a relative amount of upper-layer soil water of 16% of field capacity, half-maximal soil respiration rates are reached. (2) The apparent temperature sensitivity of soil respiration measured as Q10 varies between 1 and 5 depending on soil temperature and water content. (3) Soil respiration under reference moisture and temperature conditions is linearly related to maximum site leaf area index. At a monthly timescale, we employed the approach by [2002] that used monthly precipitation and air temperature to globally predict soil respiration (T&P model). While this model was able to

  17. Modelling temporal and large-scale spatial variability of soil respiration from soil water availability, temperature and vegetation productivity indices

    Science.gov (United States)

    Reichstein, M.; Rey, A.; Freibauer, A.; Tenhunen, J.; Valentini, R.; Soil Respiration Synthesis Team

    2003-04-01

    Field-chamber measurements of soil respiration from 17 different forest and shrubland sites in Europe and North America were summarized and analyzed with the goal to develop a model describing seasonal, inter-annual and spatial variability of soil respiration as affected by water availability, temperature and site properties. The analysis was performed at a daily and at a monthly time step. With the daily time step, the relative soil water content in the upper soil layer expressed as a fraction of field capacity was a good predictor of soil respiration at all sites. Among the site variables tested, those related to site productivity (e.g. leaf area index) correlated significantly with soil respiration, while carbon pool variables like standing biomass or the litter and soil carbon stocks did not show a clear relationship with soil respiration. Furthermore, it was evidenced that the effect of precipitation on soil respiration stretched beyond its direct effect via soil moisture. A general statistical non-linear regression model was developed to describe soil respiration as dependent on soil temperature, soil water content and site-specific maximum leaf area index. The model explained nearly two thirds of the temporal and inter-site variability of soil respiration with a mean absolute error of 0.82 µmol m-2 s-1. The parameterised model exhibits the following principal properties: 1) At a relative amount of upper-layer soil water of 16% of field capacity half-maximal soil respiration rates are reached. 2) The apparent temperature sensitivity of soil respiration measured as Q10 varies between 1 and 5 depending on soil temperature and water content. 3) Soil respiration under reference moisture and temperature conditions is linearly related to maximum site leaf area index. At a monthly time-scale we employed the approach by Raich et al. (2002, Global Change Biol. 8, 800-812) that used monthly precipitation and air temperature to globally predict soil respiration (T&P-model

  18. Changes in respiration rates and biomass attributes of epilithon due to extended exposure to zinc

    International Nuclear Information System (INIS)

    Colwell, F.S.

    1986-01-01

    The purpose of this research was to determine the influence of extended dosing of zinc on the carbon cycling and biomass characteristics of freshwater epilithon. Experiments were conducted in artificial streams continuously dosed with 0.00, 0.05, or 1.00 mg Zn liter -1 for 20 to 30 days during summer and fall, 1984 and 1985. Repeated measurement of epilithon structure and function included estimates of 14 C-glucose respiration, 14 C-glutamate respiration, O 2 and CO 2 flux rates, ash-free dry weight (AFDW), protein, carbohydrate, and algal pigment concentrations, and total and zinc-tolerant colony forming units. An increase in epilithic glucose respiration per unit biomass consistently occurred 5 to 10 days after dosing with 1.0 mg Zn liter -1 was started. At the same time significantly lower epilithon biomass occurred in the high dosed streams relative to controls in 3 out of 4 studies. Although algal pigment concentrations were lowest in the high dose streams at the midpoint of the studies, the chlorophyll a-to-pheophytin a ratio remained high, indicating that the minimal algal population was not senescing in situ. After 30 days, the epilithon dosed with 1.0 mg Zn liter -1 had higher AFDW, protein, and carbohydrate concentrations than the other treatments. The development of unique epilithon communities that are acclimated to prolonged zinc exposure is evident in the eventual recolonization of the artificial surfaces, glucose respiration rates that are comparable to controls, and presence of zinc-tolerant heterotrophs

  19. Effect of thermal treatment on the body temperature, respiration and pulse rate in dogs chronically irradiated with γ-rays

    International Nuclear Information System (INIS)

    Popova, N.A.; Petrovnin, M.G.

    1975-01-01

    Male dogs were chronically gamma-irradiated at different dose rates (0.06, 0.17, 0.34 rad/day) and subjected to heat treatment (raising of temperature from 22 0 C to 40 0 C) during winter and summer. Internal (rectal) temperature, respiration rate and heart rate were recorded. The respiration rate changed appreciably in all groups during all periods of temperature rise and fall in the chamber, but the variations were more pronounced in all groups during the winter experiment than during the summer experiment; no significant differences were found between the groups of animals while the respiration rate was changing, either in the winter or in the summer experiment. In both experiments, there were considerable heart rate variations only in the control group and in the group exposed to a dose rate of 0.06 rad/day. (V.A.P.)

  20. Does cypermethrin affect enzyme activity, respiration rate and walking behavior of the maize weevil (Sitophilus zeamais)?

    Institute of Scientific and Technical Information of China (English)

    Ronnie Von Santos Veloso; Eliseu José G.Pereira; Raul Narciso C.Guedes; Maria Goreti A.Oliveira

    2013-01-01

    Insecticides cause a range of sub-lethal effects on targeted insects,which are frequently detrimental to them.However,targeted insects are able to cope with insecticides within sub-lethal ranges,which vary with their susceptibility.Here we assessed the response of three strains of the maize weevil Sitophilus zeamais Motschulsky (Coleoptera:Curculionidae) to sub-lethal exposure to the pyrethoid insecticide cypermethrin.We expected enzyme induction associated with cypermethrin resistance since it would aid the resistant insects in surviving such exposure.Lower respiration rate and lower activity were also expected in insecticide-resistant insects since these traits are also likely to favor survivorship under insecticide exposure.Curiously though,cypermethrin did not affect activity of digestive and energy metabolism enzymes,and even reduced the activity of some enzymes (particularly for cellulase and cysteine-proteinase activity in this case).There was strain variation in response,which may be (partially) related to insecticide resistance in some strains.Sub-lethal exposure to cypermethrin depressed proteolytic and mainly cellulolytic activity in the exposed insects,which is likely to impair their fitness.However,such exposure did not affect respiration rate and walking behavior of the insects (except for the susceptible strain where walking activity was reduced).Walking activity varies with strain and may minimize insecticide exposure,which should be a concern,particularly if associated with (physiological) insecticide resistance.

  1. A regulated response to impaired respiration slows behavioral rates and increases lifespan in Caenorhabditis elegans.

    Directory of Open Access Journals (Sweden)

    David Cristina

    2009-04-01

    Full Text Available When mitochondrial respiration or ubiquinone production is inhibited in Caenorhabditis elegans, behavioral rates are slowed and lifespan is extended. Here, we show that these perturbations increase the expression of cell-protective and metabolic genes and the abundance of mitochondrial DNA. This response is similar to the response triggered by inhibiting respiration in yeast and mammalian cells, termed the "retrograde response". As in yeast, genes switched on in C. elegans mitochondrial mutants extend lifespan, suggesting an underlying evolutionary conservation of mechanism. Inhibition of fstr-1, a potential signaling gene that is up-regulated in clk-1 (ubiquinone-defective mutants, and its close homolog fstr-2 prevents the expression of many retrograde-response genes and accelerates clk-1 behavioral and aging rates. Thus, clk-1 mutants live in "slow motion" because of a fstr-1/2-dependent pathway that responds to ubiquinone. Loss of fstr-1/2 does not suppress the phenotypes of all long-lived mitochondrial mutants. Thus, although different mitochondrial perturbations activate similar transcriptional and physiological responses, they do so in different ways.

  2. Forest floor and mineral soil respiration rates in a northern Minnesota red pine chronosequence

    Science.gov (United States)

    Powers, Matthew; Kolka, Randall; Bradford, John B.; Palik, Brian J.; Jurgensen, Martin

    2018-01-01

    We measured total soil CO2 efflux (RS) and efflux from the forest floor layers (RFF) in red pine (Pinus resinosaAit.) stands of different ages to examine relationships between stand age and belowground C cycling. Soil temperature and RS were often lower in a 31-year-old stand (Y31) than in 9-year-old (Y9), 61-year-old (Y61), or 123-year-old (Y123) stands. This pattern was most apparent during warm summer months, but there were no consistent differences in RFF among different-aged stands. RFF represented an average of 4–13% of total soil respiration, and forest floor removal increased moisture content in the mineral soil. We found no evidence of an age effect on the temperature sensitivity of RS, but respiration rates in Y61 and Y123 were less sensitive to low soil moisture than RS in Y9 and Y31. Our results suggest that soil respiration’s sensitivity to soil moisture may change more over the course of stand development than its sensitivity to soil temperature in red pine, and that management activities that alter landscape-scale age distributions in red pine forests could have significant impacts on rates of soil CO2 efflux from this forest type.

  3. [Effects of simulated acid rain on respiration rate of cropland system with different soil pH].

    Science.gov (United States)

    Zhu, Xue-zhu; Zhang, Gao-chuan; Li, Hui

    2009-10-15

    To evaluate the effects of acid rain on the respiration rate of cropland system, an outdoor pot experiment was conducted with paddy soils of pH 5.48 (S1), pH 6.70 (S1) and pH 8.18 (S3) during the 2005-2007 wheat-growing seasons. The cropland system was exposed to acid rain by spraying the wheat foliage and irrigating the soil with simulated rainwater of T1 (pH 6.0), T2 (pH 6.0, ionic concentration was twice as rainwater T1), and T3 (pH 4.4, ionic concentration was twice as rainwater T1), respectively. The static opaque chamber-gas chromatograph method was used to measure CO2 fluxes from cropland system. The results showed that acid rain affected the respiration rate of cropland system through crop plant, and the cropland system could adapt to acid rain. Acid rainwater significantly increased the average respiration rate in alkaline soil (S3) cropland system, while it had no significant effects on the average respiration rate in neutral soil (S2) and acidic soil (S1) cropland systems. During 2005-2006, after the alkaline soil cropland system was treated with rainwater T3, the average respiration rate was 23.6% and 27.6% higher than that of alkaline soil cropland system treated with rainwater T1 and T2, respectively. During March to April, the respiration rate was enhanced with the increase of rainwater ionic concentration, while it was dropped with the decrease of rainwater pH value in acidic soil cropland system. It was demonstrated that soil pH and crop plant played important roles on the respiration rate of cropland system.

  4. Stress level in wild harbour porpoises (Phocoena phocoena) during satellite tagging measured by respiration, heart rate and cortisol

    DEFF Research Database (Denmark)

    Eskesen, Ida Grønborg; Teilmann, J.; Geertsen, B. M.

    2009-01-01

    During satellite tagging of harbour porpoises (Phocoena phocoena), heart rate, respiration rate and cortisol value were measured to evaluate stress effects during handling and tagging. Respiration rates were obtained using video recordings, heart rates were recorded and serum cortisol levels were...... between cortisol and month of year, sex and body length. As high individual variations occurred in response to tagging of harbour porpoises, it is not possible to give general advice based oil the factors investigated, on how to reduce stress during handling. However, pouring water over the animal...

  5. Soil respiration and rates of soil carbon turnover differ among six common European tree species

    DEFF Research Database (Denmark)

    Vesterdal, Lars; Elberling, Bo; Christiansen, Jesper Riis

    2012-01-01

    replicated at six sites in Denmark. The studied tree species were the broadleaves beech (Fagus sylvatica L.), pedunculate oak (Quercus robur L.), lime (Tilia cordata L.), sycamore maple (Acer pseudoplatanus L.) and ash (Fraxinus excelsior L.) and the conifer Norway spruce (Picea abies (L.) Karst.). Rates....... Soil respiration differed significantly among several species and increased in the order beechmaple... moisture. Carbon turnover rates based on the ratio between R h and C stock were significantly higher in ash than in all other species except maple, and maple also had higher C turnover than spruce. A similar influence of tree species on C turnover was indicated by the litterfall C to forest floor C ratio...

  6. A method of detection of respiration rate on Android using UWB Impulse Radar

    Directory of Open Access Journals (Sweden)

    Young-Jin Park

    2016-12-01

    Full Text Available Monitoring respiration rate is important because it can help to detect and prevent abnormal respiratory rates that can lead to cardiac arrest and chronic obstructive pulmonary disease. Nowadays, most medical measurement and monitoring devices are either invasive or wired but people are hesitant to attach physiological sensors to their body. In this study, we investigated whether real-time medical measurement of breathing using Novelda’s Ultra-Wideband Impulse Radio (IR-UWB–which does not need to be attached to the human body and is also non-invasive–is possible on Android. Experimental results obtained were found to be comparable to those of a commercial healthcare device.

  7. Continuous daylight in the high-Arctic summer supports high plankton respiration rates compared to those supported in the dark

    KAUST Repository

    Mesa, Elena

    2017-04-21

    Plankton respiration rate is a major component of global CO2 production and is forecasted to increase rapidly in the Arctic with warming. Yet, existing assessments in the Arctic evaluated plankton respiration in the dark. Evidence that plankton respiration may be stimulated in the light is particularly relevant for the high Arctic where plankton communities experience continuous daylight in spring and summer. Here we demonstrate that plankton community respiration evaluated under the continuous daylight conditions present in situ, tends to be higher than that evaluated in the dark. The ratio between community respiration measured in the light (Rlight) and in the dark (Rdark) increased as the 2/3 power of Rlight so that the Rlight:Rdark ratio increased from an average value of 1.37 at the median Rlight measured here (3.62 µmol O2 L-1 d-1) to an average value of 17.56 at the highest Rlight measured here (15.8 µmol O2 L-1 d-1). The role of respiratory processes as a source of CO2 in the Arctic has, therefore, been underestimated and is far more important than previously believed, particularly in the late spring, with 24 h photoperiods, when community respiration rates are highest.

  8. The effect of food on the respiration rates of Daphnia magna using a flow-through system

    Directory of Open Access Journals (Sweden)

    Claire Schmoker

    2003-09-01

    Full Text Available Respiration rates and gut fluorescence of the cladoceran Daphnia magna were studied using a flow-through system. This open system has the advantage of introducing food or producing a starvation effect during the course of the experiment. Severe variations in respiratory rates were observed in relation to the presence or absence of food, indicating short-term variability. Organisms kept starved or at low food for a long period (15-20 h responded to a sudden increase in food by increasing their respiration rates three- to four-fold in parallel with their gut content. A significant relationship between gut fluorescence and respiration rates was observed, suggesting that feeding and the related swimming activity were responsible for the observed metabolic variability.

  9. Variation in foliar respiration and wood CO2 efflux rates among species and canopy layers in a wet tropical forest.

    Science.gov (United States)

    Asao, Shinichi; Bedoya-Arrieta, Ricardo; Ryan, Michael G

    2015-02-01

    As tropical forests respond to environmental change, autotrophic respiration may consume a greater proportion of carbon fixed in photosynthesis at the expense of growth, potentially turning the forests into a carbon source. Predicting such a response requires that we measure and place autotrophic respiration in a complete carbon budget, but extrapolating measurements of autotrophic respiration from chambers to ecosystem remains a challenge. High plant species diversity and complex canopy structure may cause respiration rates to vary and measurements that do not account for this complexity may introduce bias in extrapolation more detrimental than uncertainty. Using experimental plantations of four native tree species with two canopy layers, we examined whether species and canopy layers vary in foliar respiration and wood CO2 efflux and whether the variation relates to commonly used scalars of mass, nitrogen (N), photosynthetic capacity and wood size. Foliar respiration rate varied threefold between canopy layers, ∼0.74 μmol m(-2) s(-1) in the overstory and ∼0.25 μmol m(-2) s(-1) in the understory, but little among species. Leaf mass per area, N and photosynthetic capacity explained some of the variation, but height explained more. Chamber measurements of foliar respiration thus can be extrapolated to the canopy with rates and leaf area specific to each canopy layer or height class. If area-based rates are sampled across canopy layers, the area-based rate may be regressed against leaf mass per area to derive the slope (per mass rate) to extrapolate to the canopy using the total leaf mass. Wood CO2 efflux varied 1.0-1.6 μmol m(-2) s(-1) for overstory trees and 0.6-0.9 μmol m(-2) s(-1) for understory species. The variation in wood CO2 efflux rate was mostly related to wood size, and little to species, canopy layer or height. Mean wood CO2 efflux rate per surface area, derived by regressing CO2 efflux per mass against the ratio of surface

  10. Bacterial Respiration and Growth Rates Affect the Feeding Preferences, Brood Size and Lifespan of Caenorhabditis elegans

    Science.gov (United States)

    Yu, Li; Yan, Xiaomei; Ye, Chenglong; Zhao, Haiyan; Chen, Xiaoyun; Hu, Feng; Li, Huixin

    2015-01-01

    Bacteria serve as live food and nutrients for bacterial-feeding nematodes (BFNs) in soils, and influence nematodes behavior and physiology through their metabolism. Five bacterial taxa (Bacillus amyloliquefaciens JX1, Variovorax sp. JX14, Bacillus megaterium JX15, Pseudomonas fluorescens Y1 and Escherichia coli OP50) and the typical BFN Caenorhabditis elegans were selected to study the effects of bacterial respiration and growth rates on the feeding preferences, brood size and lifespan of nematodes. P. fluorescens Y1 and E. coli OP50 were found to be more active, with high respiration and rapid growth, whereas B. amyloliquefaciens JX1 and B. megaterium JX15 were inactive. The nematode C. elegans preferred active P. fluorescens Y1 and E. coli OP50 obviously. Furthermore, worms that fed on these two active bacteria produced more offspring but had shorter lifespan, while inactive and less preferred bacteria had increased nematodes lifespan and decreased the brood size. Based on these results, we propose that the bacterial activity may influence the behavior and life traits of C. elegans in the following ways: (1) active bacteria reproduce rapidly and emit high levels of CO2 attracting C. elegans; (2) these active bacteria use more resources in the nematodes’ gut to sustain their survival and reproduction, thereby reducing the worm's lifespan; (3) inactive bacteria may provide less food for worms than active bacteria, thus increasing nematodes lifespan but decreasing their fertility. Nematodes generally require a balance between their preferred foods and beneficial foods, only preferred food may not be beneficial for nematodes. PMID:26222828

  11. Non-contact acquisition of respiration and heart rates using Doppler radar with time domain peak-detection algorithm.

    Science.gov (United States)

    Xiaofeng Yang; Guanghao Sun; Ishibashi, Koichiro

    2017-07-01

    The non-contact measurement of the respiration rate (RR) and heart rate (HR) using a Doppler radar has attracted more attention in the field of home healthcare monitoring, due to the extremely low burden on patients, unconsciousness and unconstraint. Most of the previous studies have performed the frequency-domain analysis of radar signals to detect the respiration and heartbeat frequency. However, these procedures required long period time (approximately 30 s) windows to obtain a high-resolution spectrum. In this study, we propose a time-domain peak detection algorithm for the fast acquisition of the RR and HR within a breathing cycle (approximately 5 s), including inhalation and exhalation. Signal pre-processing using an analog band-pass filter (BPF) that extracts respiration and heartbeat signals was performed. Thereafter, the HR and RR were calculated using a peak position detection method, which was carried out via LABVIEW. To evaluate the measurement accuracy, we measured the HR and RR of seven subjects in the laboratory. As a reference of HR and RR, the persons wore contact sensors i.e., an electrocardiograph (ECG) and a respiration band. The time domain peak-detection algorithm, based on the Doppler radar, exhibited a significant correlation coefficient of HR of 0.92 and a correlation coefficient of RR of 0.99, between the ECG and respiration band, respectively.

  12. Non-Invasive Detection of Respiration and Heart Rate with a Vehicle Seat Sensor.

    Science.gov (United States)

    Wusk, Grace; Gabler, Hampton

    2018-05-08

    This study demonstrates the feasibility of using a seat sensor designed for occupant classification from a production passenger vehicle to measure an occupant’s respiration rate (RR) and heart rate (HR) in a laboratory setting. Relaying occupant vital signs after a crash could improve emergency response by adding a direct measure of the occupant state to an Advanced Automatic Collision Notification (AACN) system. Data was collected from eleven participants with body weights ranging from 42 to 91 kg using a Ford Mustang passenger seat and seat sensor. Using a ballistocardiography (BCG) approach, the data was processed by time domain filtering and frequency domain analysis using the fast Fourier transform to yield RR and HR in a 1-min sliding window. Resting rates over the 30-min data collection and continuous RR and HR signals were compared to laboratory physiological instruments using the Bland-Altman approach. Differences between the seat sensor and reference sensor were within 5 breaths per minute for resting RR and within 15 beats per minute for resting HR. The time series comparisons for RR and HR were promising with the frequency analysis technique outperforming the peak detection technique. However, future work is necessary for more accurate and reliable real-time monitoring of RR and HR outside the laboratory setting.

  13. Relationships between root respiration rate and root morphology, chemistry and anatomy in Larix gmelinii and Fraxinus mandshurica.

    Science.gov (United States)

    Jia, Shuxia; McLaughlin, Neil B; Gu, Jiacun; Li, Xingpeng; Wang, Zhengquan

    2013-06-01

    Tree roots are highly heterogeneous in form and function. Previous studies revealed that fine root respiration was related to root morphology, tissue nitrogen (N) concentration and temperature, and varied with both soil depth and season. The underlying mechanisms governing the relationship between root respiration and root morphology, chemistry and anatomy along the root branch order have not been addressed. Here, we examined these relationships of the first- to fifth-order roots for near surface roots (0-10 cm) of 22-year-old larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) plantations. Root respiration rate at 18 °C was measured by gas phase O2 electrodes across the first five branching order roots (the distal roots numbered as first order) at three times of the year. Root parameters of root diameter, specific root length (SRL), tissue N concentration, total non-structural carbohydrates (starch and soluble sugar) concentration (TNC), cortical thickness and stele diameter were also measured concurrently. With increasing root order, root diameter, TNC and the ratio of root TNC to tissue N concentration increased, while the SRL, tissue N concentration and cortical proportion decreased. Root respiration rate also monotonically decreased with increasing root order in both species. Cortical tissue (including exodermis, cortical parenchyma and endodermis) was present in the first three order roots, and cross sections of the cortex for the first-order root accounted for 68% (larch) and 86% (ash) of the total cross section of the root. Root respiration was closely related to root traits such as diameter, SRL, tissue N concentration, root TNC : tissue N ratio and stele-to-root diameter proportion among the first five orders, which explained up to 81-94% of variation in the rate of root respiration for larch and up to 83-93% for ash. These results suggest that the systematic variations of root respiration rate within tree fine root system are possibly due to the

  14. Production, oxygen respiration rates, and sinking velocity of copepod fecal pellets: Direct measurements of ballasting by opal and calcite

    DEFF Research Database (Denmark)

    Ploug, H.; Iversen, M.H.; Koski, Marja

    2008-01-01

    sp., T. weissflogii, and E. huxleyi, respectively. The average carbon-specific respiration rate was 0.15 d(-1) independent on diet (range: 0.08-0.21 d(-1)). Because of ballasting of opal and calcite, sinking velocities were significantly higher for pellets produced on T. weissflogii (322 +/- 169 m d...

  15. Can we relate respiration rates of bark and wood with tissue nitrogen concentrations and branch-level CO2 fluxes across woody species?

    Science.gov (United States)

    Eller, A. S.; Wright, I.; Cernusak, L. A.

    2013-12-01

    Respiration from above-ground woody tissue is generally responsible for 5-15% of ecosystem respiration (~ 30% of total above-ground respiration). The CO2 respired by branches comes from both the sapwood and the living layers within the bark, but because there is considerable movement of respired CO2 within woody tissues (e.g. in the transpiration stream), and because the bark can present a considerable barrier to CO2 diffusion, it can be difficult to interpret measured CO2 efflux from intact branches in relation to the respiration rates of the component tissues, and to relative mass allocation to each. In this study we investigated these issues in 15 evergreen tree and shrub species native to the Sydney area in eastern Australia. We measured CO2 efflux and light-dependent refixation of respired CO2 in photosynthetic bark from the exterior surfaces of branches (0.5-1.5 cm in diameter), and measured the tissue-specific respiration rates of the bark and wood from those same branches. We also measured the nitrogen content and tissue density of the wood and bark to determine: 1) Among species, what is the relationship between %N and tissue respiration? 2) How is photosynthetic refixation of CO2 related to respiration and %N in the bark and underlying wood? and 3) What is the relationship between branch CO2 efflux and the respiration rates of the underlying wood and bark that make up the branch? Across the 15 species %N was a better predictor of respiration in wood than in bark. CO2 efflux measured from the exterior of the stem in the dark was positively correlated with photosynthetic refixation and explained ~40% of the variation in rates of refixation. Refixation rates were not strongly related to bark or wood %N. Differences among species in CO2 efflux rates were not well explained by differences in bark or wood %N and there was a stronger relationship between bark respiration and CO2 efflux than between wood respiration and CO2 efflux. These results suggest that the

  16. Soil respiration rate on the contrasting north- and south-facing slopes of a larch forest in central Siberia

    International Nuclear Information System (INIS)

    Yanagihara, Y.; Koike, T.; Matsuura, Y.; Mori, S.; Shibata, H.; Satoh, F.; Masuyagina, O.V.; Zyryanova, O.A.; Prokushkin, A.S.; Prokushkin, S.G.; Abaimov, A.P.

    2000-01-01

    In an attempt to evaluate global warming effects, we measured the soil respiration of the contrasting north- and south- facing slopes of a larch forest in central Siberia, located at Tura City in the Krasnoyarsk District, Russia. The north-facing slope is assumed to be the present condition while the south-facing slope may stand for the future warm condition. As a result of differences in solar radiation, there were clear differences between the north- and south- facing slopes in terms, for example, of the active layer as the growth rate of larch trees. The soil respiration rate was higher on the south-facing slope than on the north-facing slope. At the temperature of 15°C, soil respiration rate of the south-facing slope was ca. 6.2 μ mol CO 2 * m -2 s -1 , which was about 0.6 times lower than that of broad-leaved forests in Hokkaido. There was an exponential correlation between soil temperature at 10 cm depth and the efflux of CO 2 from the soil surface. Various conditions (soil temperature,. nitrogen content and soil water content) seemed to be more favorable for soil respiration on the south-facing slope. (author)

  17. Respiration climacteric in tomato fruits elucidated by constraint-based modelling.

    Science.gov (United States)

    Colombié, Sophie; Beauvoit, Bertrand; Nazaret, Christine; Bénard, Camille; Vercambre, Gilles; Le Gall, Sophie; Biais, Benoit; Cabasson, Cécile; Maucourt, Mickaël; Bernillon, Stéphane; Moing, Annick; Dieuaide-Noubhani, Martine; Mazat, Jean-Pierre; Gibon, Yves

    2017-03-01

    Tomato is a model organism to study the development of fleshy fruit including ripening initiation. Unfortunately, few studies deal with the brief phase of accelerated ripening associated with the respiration climacteric because of practical problems involved in measuring fruit respiration. Because constraint-based modelling allows predicting accurate metabolic fluxes, we investigated the respiration and energy dissipation of fruit pericarp at the breaker stage using a detailed stoichiometric model of the respiratory pathway, including alternative oxidase and uncoupling proteins. Assuming steady-state, a metabolic dataset was transformed into constraints to solve the model on a daily basis throughout tomato fruit development. We detected a peak of CO 2 released and an excess of energy dissipated at 40 d post anthesis (DPA) just before the onset of ripening coinciding with the respiration climacteric. We demonstrated the unbalanced carbon allocation with the sharp slowdown of accumulation (for syntheses and storage) and the beginning of the degradation of starch and cell wall polysaccharides. Experiments with fruits harvested from plants cultivated under stress conditions confirmed the concept. We conclude that modelling with an accurate metabolic dataset is an efficient tool to bypass the difficulty of measuring fruit respiration and to elucidate the underlying mechanisms of ripening. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

  18. Influence of cell detachment on the respiration rate of tumor and endothelial cells.

    Science.gov (United States)

    Danhier, Pierre; Copetti, Tamara; De Preter, Géraldine; Leveque, Philippe; Feron, Olivier; Jordan, Bénédicte F; Sonveaux, Pierre; Gallez, Bernard

    2013-01-01

    Cell detachment is a procedure routinely performed in cell culture and a necessary step in many biochemical assays including the determination of oxygen consumption rates (OCR) in vitro. In vivo, cell detachment has been shown to exert profound metabolic influences notably in cancer but also in other pathologies, such as retinal detachment for example. In the present study, we developed and validated a new technique combining electron paramagnetic resonance (EPR) oximetry and the use of cytodex 1 and collagen-coated cytodex 3 dextran microbeads, which allowed the unprecedented comparison of the OCR of adherent and detached cells with high sensitivity. Hence, we demonstrated that both B16F10 melanoma cells and human umbilical vein endothelial cells (HUVEC) experience strong OCR decrease upon trypsin or collagenase treatments. The reduction of cell oxygen consumption was more pronounced with a trypsin compared to a collagenase treatment. Cells remaining in suspension also encounter a marked intracellular ATP depletion and an increase in the lactate production/glucose uptake ratio. These findings highlight the important influence exerted by cell adhesion/detachment on cell respiration, which can be probed with the unprecedented experimental assay that was developed and validated in this study.

  19. Influence of Cell Detachment on the Respiration Rate of Tumor and Endothelial Cells

    Science.gov (United States)

    Danhier, Pierre; Copetti, Tamara; De Preter, Géraldine; Leveque, Philippe; Feron, Olivier; Jordan, Bénédicte F.; Sonveaux, Pierre; Gallez, Bernard

    2013-01-01

    Cell detachment is a procedure routinely performed in cell culture and a necessary step in many biochemical assays including the determination of oxygen consumption rates (OCR) in vitro. In vivo, cell detachment has been shown to exert profound metabolic influences notably in cancer but also in other pathologies, such as retinal detachment for example. In the present study, we developed and validated a new technique combining electron paramagnetic resonance (EPR) oximetry and the use of cytodex 1 and collagen-coated cytodex 3 dextran microbeads, which allowed the unprecedented comparison of the OCR of adherent and detached cells with high sensitivity. Hence, we demonstrated that both B16F10 melanoma cells and human umbilical vein endothelial cells (HUVEC) experience strong OCR decrease upon trypsin or collagenase treatments. The reduction of cell oxygen consumption was more pronounced with a trypsin compared to a collagenase treatment. Cells remaining in suspension also encounter a marked intracellular ATP depletion and an increase in the lactate production/glucose uptake ratio. These findings highlight the important influence exerted by cell adhesion/detachment on cell respiration, which can be probed with the unprecedented experimental assay that was developed and validated in this study. PMID:23382841

  20. Ocean-scale patterns in community respiration rates along continuous transects across the Pacific Ocean.

    Science.gov (United States)

    Wilson, Jesse M; Severson, Rodney; Beman, J Michael

    2014-01-01

    Community respiration (CR) of organic material to carbon dioxide plays a fundamental role in ecosystems and ocean biogeochemical cycles, as it dictates the amount of production available to higher trophic levels and for export to the deep ocean. Yet how CR varies across large oceanographic gradients is not well-known: CR is measured infrequently and cannot be easily sensed from space. We used continuous oxygen measurements collected by autonomous gliders to quantify surface CR rates across the Pacific Ocean. CR rates were calculated from changes in apparent oxygen utilization and six different estimates of oxygen flux based on wind speed. CR showed substantial spatial variation: rates were lowest in ocean gyres (mean of 6.93 mmol m(-3) d(-1)±8.0 mmol m(-3) d(-1) standard deviation in the North Pacific Subtropical Gyre) and were more rapid and more variable near the equator (8.69 mmol m(-3) d(-1)±7.32 mmol m(-3) d(-1) between 10°N and 10°S) and near shore (e.g., 5.62 mmol m(-3) d(-1)±45.6 mmol m(-3) d(-1) between the coast of California and 124°W, and 17.0 mmol m(-3) d(-1)±13.9 mmol m(-3) d(-1) between 156°E and the Australian coast). We examined how CR varied with coincident measurements of temperature, turbidity, and chlorophyll concentrations (a proxy for phytoplankton biomass), and found that CR was weakly related to different explanatory variables across the Pacific, but more strongly related to particular variables in different biogeographical areas. Our results indicate that CR is not a simple linear function of chlorophyll or temperature, and that at the scale of the Pacific, the coupling between primary production, ocean warming, and CR is complex and variable. We suggest that this stems from substantial spatial variation in CR captured by high-resolution autonomous measurements.

  1. Insights Gained from the Dehalococcoides ethenogenes Strain 195’s Transcriptome Responding to a Wide Range of Respiration Rates and Substrate Types

    Science.gov (United States)

    2012-04-01

    fermented yeast , pure hydrogen, or endogenous biomass decay). When similarly respiring (~120 ?eeq PCE/(L-hr)) batch and PSS cultures were contrasted, the...REPORT Insights gained from the “Dehalococcoides ethenogenes” strain 195?s transcriptome responding to a wide range of respiration rates and substrate...types. 14. ABSTRACT 16. SECURITY CLASSIFICATION OF: Bacteria of the group “Dehalococcoides” display the ability to respire recalcitrant chlorinated

  2. Reverse engineering model structures for soil and ecosystem respiration: the potential of gene expression programming

    Directory of Open Access Journals (Sweden)

    I. Ilie

    2017-09-01

    Full Text Available Accurate model representation of land–atmosphere carbon fluxes is essential for climate projections. However, the exact responses of carbon cycle processes to climatic drivers often remain uncertain. Presently, knowledge derived from experiments, complemented by a steadily evolving body of mechanistic theory, provides the main basis for developing such models. The strongly increasing availability of measurements may facilitate new ways of identifying suitable model structures using machine learning. Here, we explore the potential of gene expression programming (GEP to derive relevant model formulations based solely on the signals present in data by automatically applying various mathematical transformations to potential predictors and repeatedly evolving the resulting model structures. In contrast to most other machine learning regression techniques, the GEP approach generates readable models that allow for prediction and possibly for interpretation. Our study is based on two cases: artificially generated data and real observations. Simulations based on artificial data show that GEP is successful in identifying prescribed functions, with the prediction capacity of the models comparable to four state-of-the-art machine learning methods (random forests, support vector machines, artificial neural networks, and kernel ridge regressions. Based on real observations we explore the responses of the different components of terrestrial respiration at an oak forest in south-eastern England. We find that the GEP-retrieved models are often better in prediction than some established respiration models. Based on their structures, we find previously unconsidered exponential dependencies of respiration on seasonal ecosystem carbon assimilation and water dynamics. We noticed that the GEP models are only partly portable across respiration components, the identification of a general terrestrial respiration model possibly prevented by equifinality issues. Overall

  3. Reverse engineering model structures for soil and ecosystem respiration: the potential of gene expression programming

    Science.gov (United States)

    Ilie, Iulia; Dittrich, Peter; Carvalhais, Nuno; Jung, Martin; Heinemeyer, Andreas; Migliavacca, Mirco; Morison, James I. L.; Sippel, Sebastian; Subke, Jens-Arne; Wilkinson, Matthew; Mahecha, Miguel D.

    2017-09-01

    Accurate model representation of land-atmosphere carbon fluxes is essential for climate projections. However, the exact responses of carbon cycle processes to climatic drivers often remain uncertain. Presently, knowledge derived from experiments, complemented by a steadily evolving body of mechanistic theory, provides the main basis for developing such models. The strongly increasing availability of measurements may facilitate new ways of identifying suitable model structures using machine learning. Here, we explore the potential of gene expression programming (GEP) to derive relevant model formulations based solely on the signals present in data by automatically applying various mathematical transformations to potential predictors and repeatedly evolving the resulting model structures. In contrast to most other machine learning regression techniques, the GEP approach generates readable models that allow for prediction and possibly for interpretation. Our study is based on two cases: artificially generated data and real observations. Simulations based on artificial data show that GEP is successful in identifying prescribed functions, with the prediction capacity of the models comparable to four state-of-the-art machine learning methods (random forests, support vector machines, artificial neural networks, and kernel ridge regressions). Based on real observations we explore the responses of the different components of terrestrial respiration at an oak forest in south-eastern England. We find that the GEP-retrieved models are often better in prediction than some established respiration models. Based on their structures, we find previously unconsidered exponential dependencies of respiration on seasonal ecosystem carbon assimilation and water dynamics. We noticed that the GEP models are only partly portable across respiration components, the identification of a general terrestrial respiration model possibly prevented by equifinality issues. Overall, GEP is a promising

  4. Ocean-scale patterns in community respiration rates along continuous transects across the Pacific Ocean.

    Directory of Open Access Journals (Sweden)

    Jesse M Wilson

    Full Text Available Community respiration (CR of organic material to carbon dioxide plays a fundamental role in ecosystems and ocean biogeochemical cycles, as it dictates the amount of production available to higher trophic levels and for export to the deep ocean. Yet how CR varies across large oceanographic gradients is not well-known: CR is measured infrequently and cannot be easily sensed from space. We used continuous oxygen measurements collected by autonomous gliders to quantify surface CR rates across the Pacific Ocean. CR rates were calculated from changes in apparent oxygen utilization and six different estimates of oxygen flux based on wind speed. CR showed substantial spatial variation: rates were lowest in ocean gyres (mean of 6.93 mmol m(-3 d(-1±8.0 mmol m(-3 d(-1 standard deviation in the North Pacific Subtropical Gyre and were more rapid and more variable near the equator (8.69 mmol m(-3 d(-1±7.32 mmol m(-3 d(-1 between 10°N and 10°S and near shore (e.g., 5.62 mmol m(-3 d(-1±45.6 mmol m(-3 d(-1 between the coast of California and 124°W, and 17.0 mmol m(-3 d(-1±13.9 mmol m(-3 d(-1 between 156°E and the Australian coast. We examined how CR varied with coincident measurements of temperature, turbidity, and chlorophyll concentrations (a proxy for phytoplankton biomass, and found that CR was weakly related to different explanatory variables across the Pacific, but more strongly related to particular variables in different biogeographical areas. Our results indicate that CR is not a simple linear function of chlorophyll or temperature, and that at the scale of the Pacific, the coupling between primary production, ocean warming, and CR is complex and variable. We suggest that this stems from substantial spatial variation in CR captured by high-resolution autonomous measurements.

  5. A Satellite-Based Model for Simulating Ecosystem Respiration in the Tibetan and Inner Mongolian Grasslands

    Directory of Open Access Journals (Sweden)

    Rong Ge

    2018-01-01

    Full Text Available It is important to accurately evaluate ecosystem respiration (RE in the alpine grasslands of the Tibetan Plateau and the temperate grasslands of the Inner Mongolian Plateau, as it serves as a sensitivity indicator of regional and global carbon cycles. Here, we combined flux measurements taken between 2003 and 2013 from 16 grassland sites across northern China and the corresponding MODIS land surface temperature (LST, enhanced vegetation index (EVI, and land surface water index (LSWI to build a satellite-based model to estimate RE at a regional scale. First, the dependencies of both spatial and temporal variations of RE on these biotic and climatic factors were examined explicitly. We found that plant productivity and moisture, but not temperature, can best explain the spatial pattern of RE in northern China’s grasslands; while temperature plays a major role in regulating the temporal variability of RE in the alpine grasslands, and moisture is equally as important as temperature in the temperate grasslands. However, the moisture effect on RE and the explicit representation of spatial variation process are often lacking in most of the existing satellite-based RE models. On this basis, we developed a model by comprehensively considering moisture, temperature, and productivity effects on both temporal and spatial processes of RE, and then, we evaluated the model performance. Our results showed that the model well explained the observed RE in both the alpine (R2 = 0.79, RMSE = 0.77 g C m−2 day−1 and temperate grasslands (R2 = 0.75, RMSE = 0.60 g C m−2 day−1. The inclusion of the LSWI as the water-limiting factor substantially improved the model performance in arid and semi-arid ecosystems, and the spatialized basal respiration rate as an indicator for spatial variation largely determined the regional pattern of RE. Finally, the model accurately reproduced the seasonal and inter-annual variations and spatial variability of RE, and it avoided

  6. Sodium valproate induces mitochondrial respiration dysfunction in HepG2 in vitro cell model.

    Science.gov (United States)

    Komulainen, Tuomas; Lodge, Tiffany; Hinttala, Reetta; Bolszak, Maija; Pietilä, Mika; Koivunen, Peppi; Hakkola, Jukka; Poulton, Joanna; Morten, Karl J; Uusimaa, Johanna

    2015-05-04

    Sodium valproate (VPA) is a potentially hepatotoxic antiepileptic drug. Risk of VPA-induced hepatotoxicity is increased in patients with mitochondrial diseases and especially in patients with POLG1 gene mutations. We used a HepG2 cell in vitro model to investigate the effect of VPA on mitochondrial activity. Cells were incubated in glucose medium and mitochondrial respiration-inducing medium supplemented with galactose and pyruvate. VPA treatments were carried out at concentrations of 0-2.0mM for 24-72 h. In both media, VPA caused decrease in oxygen consumption rates and mitochondrial membrane potential. VPA exposure led to depleted ATP levels in HepG2 cells incubated in galactose medium suggesting dysfunction in mitochondrial ATP production. In addition, VPA exposure for 72 h increased levels of mitochondrial reactive oxygen species (ROS), but adversely decreased protein levels of mitochondrial superoxide dismutase SOD2, suggesting oxidative stress caused by impaired elimination of mitochondrial ROS and a novel pathomechanism related to VPA toxicity. Increased cell death and decrease in cell number was detected under both metabolic conditions. However, immunoblotting did not show any changes in the protein levels of the catalytic subunit A of mitochondrial DNA polymerase γ, the mitochondrial respiratory chain complexes I, II and IV, ATP synthase, E3 subunit dihydrolipoyl dehydrogenase of pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and glutathione peroxidase. Our results show that VPA inhibits mitochondrial respiration and leads to mitochondrial dysfunction, oxidative stress and increased cell death, thus suggesting an essential role of mitochondria in VPA-induced hepatotoxicity. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  7. Relict Mountain Permafrost Area (Loess Plateau, China) Exhibits High Ecosystem Respiration Rates and Accelerating Rates in Response to Warming

    Science.gov (United States)

    Mu, Cuicui; Wu, Xiaodong; Zhao, Qian; Smoak, Joseph M.; Yang, Yulong; Hu, Lian; Zhong, Wen; Liu, Guimin; Xu, Haiyan; Zhang, Tingjun

    2017-10-01

    Relict permafrost regions are characterized by thin permafrost and relatively high temperatures. Understanding the ecosystem respiration rate (ERR) and its relationship with soil hydrothermal conditions in these areas can provide knowledge regarding the permafrost carbon cycle in a warming world. In this study, we examined a permafrost area, a boundary area, and a seasonally frozen ground area within a relict permafrost region on the east edge of the Qinghai-Tibetan Plateau, China. Measurements from July 2015 to September 2016 showed that the mean annual ecosystem CO2 emissions for the boundary area were greater than the permafrost area. The Q10 value of the ERRs in the seasonally frozen ground area was greater than the permafrost area, indicating that the carbon emissions in the nonpermafrost areas were more sensitive to warming. The 1 year open-top chamber (OTC) warming increased soil temperatures in both the permafrost and seasonally frozen ground areas throughout the year, and the warming increased the ERRs by 1.18 (0.99-1.38, with interquartile range) and 1.13 (0.75-1.54, with interquartile range) μmol CO2 m-2 s-1 in permafrost and seasonally frozen ground areas, respectively. The OTC warming increased annual ERRs by approximately 50% for both permafrost and seasonally frozen ground areas with half the increase occurring during the nongrowing seasons. These results suggest that the ERRs in relict permafrost are high in comparison with arctic regions, and the carbon balance in relict permafrost areas could be greatly changed by climate warming.

  8. A pilot study of the nocturnal respiration rates in COPD patients in the home environment using a non-contact biomotion sensor

    International Nuclear Information System (INIS)

    Ballal, Tarig; Zaffaroni, Alberto; Heneghan, Conor; Shouldice, Redmond; Boyle, Patricia; McNicholas, Walter T; De Chazal, Philip; Donnelly, Seamas C

    2014-01-01

    Nocturnal respiration rate parameters were collected from 20 COPD subjects over an 8 week period, to determine if changes in respiration rate were associated with exacerbations of COPD. These subjects were primarily GOLD Class 2 to 4, and had been recently discharged from hospital following a recent exacerbation. The respiration rates were collected using a non-contact radio-frequency biomotion sensor which senses respiratory effort and body movement using a short-range radio-frequency sensor. An adaptive notch filter was applied to the measured signal to determine respiratory rate over rolling 15 s segments. The accuracy of the algorithm was initially verified using ten manually-scored 15 min segments of respiration extracted from overnight polysomnograms. The calculated respiration rates were within 1 breath min −1 for >98% of the estimates. For the 20 subjects monitored, 11 experienced one or more subsequent exacerbation of COPD (ECOPD) events during the 8 week monitoring period (19 events total). Analysis of the data revealed a significant increase in nocturnal respiration rate (e.g. >2 breath min −1 ) prior to many ECOPD events. Using a simple classifier of a change of 1 breath min −1 in the mode of the nocturnal respiration rate, a predictive rule showed a sensitivity of 63% and specificity of 85% for predicting an exacerbation within a 5 d window. We conclude that it is possible to collect respiration rates reliably in the home environment, and that the respiration rate may be a potential indicator of change in clinical status. (paper)

  9. Lapse rate modeling

    DEFF Research Database (Denmark)

    De Giovanni, Domenico

    2010-01-01

    prepayment models for mortgage backed securities, this paper builds a Rational Expectation (RE) model describing the policyholders' behavior in lapsing the contract. A market model with stochastic interest rates is considered, and the pricing is carried out through numerical approximation...

  10. Lapse Rate Modeling

    DEFF Research Database (Denmark)

    De Giovanni, Domenico

    prepayment models for mortgage backed securities, this paper builds a Rational Expectation (RE) model describing the policyholders' behavior in lapsing the contract. A market model with stochastic interest rates is considered, and the pricing is carried out through numerical approximation...

  11. Rates of Litter Decomposition and Soil Respiration in Relation to Soil Temperature and Water in Different-Aged Pinus massoniana Forests in the Three Gorges Reservoir Area, China

    Science.gov (United States)

    Zeng, Lixiong; Huang, Zhilin; Lei, Jingpin; Zhou, Benzhi; Li, Maihe

    2014-01-01

    To better understand the soil carbon dynamics and cycling in terrestrial ecosystems in response to environmental changes, we studied soil respiration, litter decomposition, and their relations to soil temperature and soil water content for 18-months (Aug. 2010–Jan. 2012) in three different-aged Pinus massoniana forests in the Three Gorges Reservoir Area, China. Across the experimental period, the mean total soil respiration and litter respiration were 1.94 and 0.81, 2.00 and 0.60, 2.19 and 0.71 µmol CO2 m−2 s−1, and the litter dry mass remaining was 57.6%, 56.2% and 61.3% in the 20-, 30-, and 46-year-old forests, respectively. We found that the temporal variations of soil respiration and litter decomposition rates can be well explained by soil temperature at 5 cm depth. Both the total soil respiration and litter respiration were significantly positively correlated with the litter decomposition rates. The mean contribution of the litter respiration to the total soil respiration was 31.0%–45.9% for the three different-aged forests. The present study found that the total soil respiration was not significantly affected by forest age when P. masonniana stands exceed a certain age (e.g. >20 years old), but it increased significantly with increased soil temperature. Hence, forest management strategies need to protect the understory vegetation to limit soil warming, in order to reduce the CO2 emission under the currently rapid global warming. The contribution of litter decomposition to the total soil respiration varies across spatial and temporal scales. This indicates the need for separate consideration of soil and litter respiration when assessing the climate impacts on forest carbon cycling. PMID:25004164

  12. Model Construction and Analysis of Respiration in Halobacterium salinarum.

    Directory of Open Access Journals (Sweden)

    Cherryl O Talaue

    Full Text Available The archaeon Halobacterium salinarum can produce energy using three different processes, namely photosynthesis, oxidative phosphorylation and fermentation of arginine, and is thus a model organism in bioenergetics. Compared to its bacteriorhodopsin-driven photosynthesis, less attention has been devoted to modeling its respiratory pathway. We created a system of ordinary differential equations that models its oxidative phosphorylation. The model consists of the electron transport chain, the ATP synthase, the potassium uniport and the sodium-proton antiport. By fitting the model parameters to experimental data, we show that the model can explain data on proton motive force generation, ATP production, and the charge balancing of ions between the sodium-proton antiporter and the potassium uniport. We performed sensitivity analysis of the model parameters to determine how the model will respond to perturbations in parameter values. The model and the parameters we derived provide a resource that can be used for analytical studies of the bioenergetics of H. salinarum.

  13. Model Construction and Analysis of Respiration in Halobacterium salinarum.

    Science.gov (United States)

    Talaue, Cherryl O; del Rosario, Ricardo C H; Pfeiffer, Friedhelm; Mendoza, Eduardo R; Oesterhelt, Dieter

    2016-01-01

    The archaeon Halobacterium salinarum can produce energy using three different processes, namely photosynthesis, oxidative phosphorylation and fermentation of arginine, and is thus a model organism in bioenergetics. Compared to its bacteriorhodopsin-driven photosynthesis, less attention has been devoted to modeling its respiratory pathway. We created a system of ordinary differential equations that models its oxidative phosphorylation. The model consists of the electron transport chain, the ATP synthase, the potassium uniport and the sodium-proton antiport. By fitting the model parameters to experimental data, we show that the model can explain data on proton motive force generation, ATP production, and the charge balancing of ions between the sodium-proton antiporter and the potassium uniport. We performed sensitivity analysis of the model parameters to determine how the model will respond to perturbations in parameter values. The model and the parameters we derived provide a resource that can be used for analytical studies of the bioenergetics of H. salinarum.

  14. Dynamic relationships between microbial biomass, respiration, inorganic nutrients and enzyme activities: informing enzyme based decomposition models

    Directory of Open Access Journals (Sweden)

    Daryl L Moorhead

    2013-08-01

    Full Text Available We re-examined data from a recent litter decay study to determine if additional insights could be gained to inform decomposition modeling. Rinkes et al. (2013 conducted 14-day laboratory incubations of sugar maple (Acer saccharum or white oak (Quercus alba leaves, mixed with sand (0.4% organic C content or loam (4.1% organic C. They measured microbial biomass C, carbon dioxide efflux, soil ammonium, nitrate, and phosphate concentrations, and β-glucosidase (BG, β-N-acetyl-glucosaminidase (NAG, and acid phosphatase (AP activities on days 1, 3, and 14. Analyses of relationships among variables yielded different insights than original analyses of individual variables. For example, although respiration rates per g soil were higher for loam than sand, rates per g soil C were actually higher for sand than loam, and rates per g microbial C showed little difference between treatments. Microbial biomass C peaked on day 3 when biomass-specific activities of enzymes were lowest, suggesting uptake of litter C without extracellular hydrolysis. This result refuted a common model assumption that all enzyme production is constitutive and thus proportional to biomass, and/or indicated that part of litter decay is independent of enzyme activity. The length and angle of vectors defined by ratios of enzyme activities (BG/NAG versus BG/AP represent relative microbial investments in C (length, and N and P (angle acquiring enzymes. Shorter lengths on day 3 suggested low C limitation, whereas greater lengths on day 14 suggested an increase in C limitation with decay. The soils and litter in this study generally had stronger P limitation (angles > 45˚. Reductions in vector angles to < 45˚ for sand by day 14 suggested a shift to N limitation. These relational variables inform enzyme-based models, and are usually much less ambiguous when obtained from a single study in which measurements were made on the same samples than when extrapolated from separate studies.

  15. Effects of minimal processing on the respiration rate and quality of rambutan cv. ‘Rong-Rien’

    Directory of Open Access Journals (Sweden)

    Buncha Ooraikul

    2008-04-01

    Full Text Available Respiration rate at 4oC and minimal processing of rambutan cv. ‘Rong-Rien’ were investigated. Rambutan was harvested from Amphur Ban Na San, Surat Thani Province, at the stage when its skin was turning into a combination of red, green and yellow. After harvesting, the fruits were size-graded to 27-30 fruits/kg, hydrocooled to 14oC, packed with ice in Styrofoam boxes and transported to the laboratory at Prince of Songkla University within 6 h. The respiration rate of fresh rambutan fruits was monitored. For minimal processing, the fruits were soaked in warm solution (55oC of 100 ppm sodium hypochlorite for one min and immediately cooled in cold water until their internal temperature reached 14oC. The minimal process included peeling, with and without coring. The peeled and peeled and cored rambutan samples were immersed in a solution of 0.5% citric acid + 0.5% CaCl2 at 4oC for 2 min. The average respiration rates (within 6 h at 4oC of whole fruit, peeled, and peeled and cored rambutan samples were measured and found to be 122, 134 and 143 mg CO2/kg/h, respectively. These findings indicated that a preparation style as peeled rambutan without coring, nylon/LLDPE bag, storage temperature of 4.0±1oC, were suitably applied for processed rambutans. To obtain a longer extended shelf life (>12 days of minimally processed peeled rambutans, further study on food additives, including acidulants and preservative used and gas composition in modified atmosphere packaging (MAP is needed.

  16. Leaf photosynthesis and respiration of three bioenergy crops in relation to temperature and leaf nitrogen: how conserved are biochemical model parameters among crop species?

    Science.gov (United States)

    Archontoulis, S. V.; Yin, X.; Vos, J.; Danalatos, N. G.; Struik, P. C.

    2012-01-01

    Given the need for parallel increases in food and energy production from crops in the context of global change, crop simulation models and data sets to feed these models with photosynthesis and respiration parameters are increasingly important. This study provides information on photosynthesis and respiration for three energy crops (sunflower, kenaf, and cynara), reviews relevant information for five other crops (wheat, barley, cotton, tobacco, and grape), and assesses how conserved photosynthesis parameters are among crops. Using large data sets and optimization techniques, the C3 leaf photosynthesis model of Farquhar, von Caemmerer, and Berry (FvCB) and an empirical night respiration model for tested energy crops accounting for effects of temperature and leaf nitrogen were parameterized. Instead of the common approach of using information on net photosynthesis response to CO2 at the stomatal cavity (An–Ci), the model was parameterized by analysing the photosynthesis response to incident light intensity (An–Iinc). Convincing evidence is provided that the maximum Rubisco carboxylation rate or the maximum electron transport rate was very similar whether derived from An–Ci or from An–Iinc data sets. Parameters characterizing Rubisco limitation, electron transport limitation, the degree to which light inhibits leaf respiration, night respiration, and the minimum leaf nitrogen required for photosynthesis were then determined. Model predictions were validated against independent sets. Only a few FvCB parameters were conserved among crop species, thus species-specific FvCB model parameters are needed for crop modelling. Therefore, information from readily available but underexplored An–Iinc data should be re-analysed, thereby expanding the potential of combining classical photosynthetic data and the biochemical model. PMID:22021569

  17. Modelling soil anaerobiosis from water retention characteristics and soil respiration

    NARCIS (Netherlands)

    Schurgers, G.; Dörsch, P.; Bakken, L.; Leffelaar, P.A.; Egil Haugen, L.

    2006-01-01

    Oxygen is a prerequisite for some and an inhibitor to other microbial functions in soils, hence the temporal and spatial distribution of oxygen within the soil matrix is crucial in soil biogeochemistry and soil biology. Various attempts have been made to model the anaerobic fraction of the soil

  18. Dependence of wheat and rice respiration on tissue nitrogen and the corresponding net carbon fixation efficiency under different rates of nitrogen application

    Science.gov (United States)

    Sun, Wenjuan; Huang, Yao; Chen, Shutao; Zou, Jianwen; Zheng, Xunhua

    2007-02-01

    To quantitatively address the role of tissue N in crop respiration under various agricultural practices, and to consequently evaluate the impact of synthetic fertilizer N application on biomass production and respiration, and hence net carbon fixation efficiency ( E ncf), pot and field experiments were carried out for an annual rotation of a rice-wheat cropping system from 2001 to 2003. The treatments of the pot experiments included fertilizer N application, sowing date and planting density. Different rates of N application were tested in the field experiments. Static opaque chambers were used for sampling the gas. The respiration as CO2 emission was detected by a gas chromatograph. A successive biomass clipping method was employed to determine the crop autotrophic respiration coefficient ( R a). Results from the pot experiments revealed a linear relationship between R a and tissue N content as R a = 4.74N-1.45 ( R 2 = 0.85, P < 0.001). Measurements and calculations from the field experiments indicated that fertilizer N application promoted not only biomass production but also increased the respiration of crops. A further investigation showed that the increase of carbon loss in terms of respiration owing to fertilizer N application exceeded that of net carbon gain in terms of aboveground biomass when fertilizer N was applied over a certain rate. Consequently, the E ncf declined as the N application rate increased.

  19. Adaptive radiation along a thermal gradient: preliminary results of habitat use and respiration rate divergence among whitefish morphs.

    Directory of Open Access Journals (Sweden)

    Kimmo Kalevi Kahilainen

    Full Text Available Adaptive radiation is considered an important mechanism for the development of new species, but very little is known about the role of thermal adaptation during this process. Such adaptation should be especially important in poikilothermic animals that are often subjected to pronounced seasonal temperature variation that directly affects metabolic function. We conducted a preliminary study of individual lifetime thermal habitat use and respiration rates of four whitefish (Coregonus lavaretus (L. morphs (two pelagic, one littoral and one profundal using stable carbon and oxygen isotope values of otolith carbonate. These morphs, two of which utilized pelagic habitats, one littoral and one profundal recently diverged via adaptive radiation to exploit different major niches in a deep and thermally stratified subarctic lake. We found evidence that the morphs used different thermal niches. The profundal morph had the most distinct thermal niche and consistently occupied the coldest thermal habitat of the lake, whereas differences were less pronounced among the shallow water pelagic and littoral morphs. Our results indicated ontogenetic shifts in thermal niches: juveniles of all whitefish morphs inhabited warmer ambient temperatures than adults. According to sampling of the otolith nucleus, hatching temperatures were higher for benthic compared to pelagic morphs. Estimated respiration rate was the lowest for benthivorous profundal morph, contrasting with the higher values estimated for the other morphs that inhabited shallower and warmer water. These preliminary results suggest that physiological adaptation to different thermal habitats shown by the sympatric morphs may play a significant role in maintaining or strengthening niche segregation and divergence in life-history traits, potentially contributing to reproductive isolation and incipient speciation.

  20. Frost Induces Respiration and Accelerates Carbon Depletion in Trees.

    Directory of Open Access Journals (Sweden)

    Or Sperling

    Full Text Available Cellular respiration depletes stored carbohydrates during extended periods of limited photosynthesis, e.g. winter dormancy or drought. As respiration rate is largely a function of temperature, the thermal conditions during such periods may affect non-structural carbohydrate (NSC availability and, ultimately, recovery. Here, we surveyed stem responses to temperature changes in 15 woody species. For two species with divergent respirational response to frost, P. integerrima and P. trichocarpa, we also examined corresponding changes in NSC levels. Finally, we simulated respiration-induced NSC depletion using historical temperature data for the western US. We report a novel finding that tree stems significantly increase respiration in response to near freezing temperatures. We observed this excess respiration in 13 of 15 species, deviating 10% to 170% over values predicted by the Arrhenius equation. Excess respiration persisted at temperatures above 0 °C during warming and reoccurred over multiple frost-warming cycles. A large adjustment of NSCs accompanied excess respiration in P. integerrima, whereas P. trichocarpa neither excessively respired nor adjusted NSCs. Over the course of the years included in our model, frost-induced respiration accelerated stem NSC consumption by 8.4 mg (glucose eq. cm(-3 yr(-1 on average in the western US, a level of depletion that may continue to significantly affect spring NSC availability. This novel finding revises the current paradigm of low temperature respiration kinetics.

  1. Frost Induces Respiration and Accelerates Carbon Depletion in Trees.

    Science.gov (United States)

    Sperling, Or; Earles, J Mason; Secchi, Francesca; Godfrey, Jessie; Zwieniecki, Maciej A

    2015-01-01

    Cellular respiration depletes stored carbohydrates during extended periods of limited photosynthesis, e.g. winter dormancy or drought. As respiration rate is largely a function of temperature, the thermal conditions during such periods may affect non-structural carbohydrate (NSC) availability and, ultimately, recovery. Here, we surveyed stem responses to temperature changes in 15 woody species. For two species with divergent respirational response to frost, P. integerrima and P. trichocarpa, we also examined corresponding changes in NSC levels. Finally, we simulated respiration-induced NSC depletion using historical temperature data for the western US. We report a novel finding that tree stems significantly increase respiration in response to near freezing temperatures. We observed this excess respiration in 13 of 15 species, deviating 10% to 170% over values predicted by the Arrhenius equation. Excess respiration persisted at temperatures above 0 °C during warming and reoccurred over multiple frost-warming cycles. A large adjustment of NSCs accompanied excess respiration in P. integerrima, whereas P. trichocarpa neither excessively respired nor adjusted NSCs. Over the course of the years included in our model, frost-induced respiration accelerated stem NSC consumption by 8.4 mg (glucose eq.) cm(-3) yr(-1) on average in the western US, a level of depletion that may continue to significantly affect spring NSC availability. This novel finding revises the current paradigm of low temperature respiration kinetics.

  2. Predawn respiration rates during flowering are highly predictive of yield response in Gossypium hirsutum when yield variability is water-induced

    Science.gov (United States)

    Respiratory carbon evolution by leaves under abiotic stress is implicated as a major limitation to crop productivity; however, respiration rates of fully expanded leaves are positively associated with plant growth rates. Given the substantial sensitivity of plant growth to drought, it was hypothesiz...

  3. BOREAS TE-5 Soil Respiration Data

    Science.gov (United States)

    Hall, Forrest G. (Editor); Curd, Shelaine (Editor); Ehleriinger, Jim; Brooks, J. Renee; Flanagan, Larry

    2000-01-01

    The BOREAS TE-5 team collected measurements in the NSA and SSA on gas exchange, gas composition, and tree growth. Soil respiration data were collected from 26-May-94 to 07-Sep-94 in the BOREAS NSA and SSA to compare the soil respiration rates in different forest sites using a LI-COR 6200 soil respiration chamber (model 6299). The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distrobuted Activity Archive Center (DAAC).

  4. Gaseous elemental mercury emissions and CO2 respiration rates in terrestrial soils under controlled aerobic and anaerobic laboratory conditions

    International Nuclear Information System (INIS)

    Obrist, Daniel; Fain, Xavier; Berger, Carsen

    2010-01-01

    Mercury (Hg) levels in terrestrial soils are linked to the presence of organic carbon (C). Carbon pools are highly dynamic and subject to mineralization processes, but little is known about the fate of Hg during decomposition. This study evaluated relationships between gaseous Hg emissions from soils and carbon dioxide (CO 2 ) respiration under controlled laboratory conditions to assess potential losses of Hg to the atmosphere during C mineralization. Results showed a linear correlation (r 2 = 0.49) between Hg and CO 2 emissions in 41 soil samples, an effect unlikely to be caused by temperature, radiation, different Hg contents, or soil moisture. Stoichiometric comparisons of Hg/C ratios of emissions and underlying soil substrates suggest that 3% of soil Hg was subject to evasion. Even minute emissions of Hg upon mineralization, however, may be important on a global scale given the large Hg pools sequestered in terrestrial soils and C stocks. We induced changes in CO 2 respiration rates and observed Hg flux responses, including inducement of anaerobic conditions by changing chamber air supply from N 2 /O 2 (80% and 20%, respectively) to pure N 2 . Unexpectedly, Hg emissions almost quadrupled after O 2 deprivation while oxidative mineralization (i.e., CO 2 emissions) was greatly reduced. This Hg flux response to anaerobic conditions was lacking when repeated with sterilized soils, possibly due to involvement of microbial reduction of Hg 2+ by anaerobes or indirect abiotic effects such as alterations in soil redox conditions. This study provides experimental evidence that Hg volatilization, and possibly Hg 2+ reduction, is related to O 2 availability in soils from two Sierra Nevada forests. If this result is confirmed in soils from other areas, the implication is that Hg volatilization from terrestrial soils is partially controlled by soil aeration and that low soil O 2 levels and possibly low soil redox potentials lead to increased Hg volatilization from soils.

  5. The value of soil respiration measurements for interpreting and modeling terrestrial carbon cycling

    Energy Technology Data Exchange (ETDEWEB)

    Phillips, Claire L.; Bond-Lamberty, Ben; Desai, Ankur R.; Lavoie, Martin; Risk, Dave; Tang, Jianwu; Todd-Brown, Katherine; Vargas, Rodrigo

    2016-11-16

    A recent acceleration of model-data synthesis activities has leveraged many terrestrial carbon (C) datasets, but utilization of soil respiration (RS) data has not kept pace with other types such as eddy covariance (EC) fluxes and soil C stocks. Here we argue that RS data, including non-continuous measurements from survey sampling campaigns, have unrealized value and should be utilized more extensively and creatively in data synthesis and modeling activities. We identify three major challenges in interpreting RS data, and discuss opportunities to address them. The first challenge is that when RS is compared to ecosystem respiration (RECO) measured from EC towers, it is not uncommon to find substantial mismatch, indicating one or both flux methodologies are unreliable. We argue the most likely cause of mismatch is unreliable EC data, and there is an unrecognized opportunity to utilize RS for EC quality control. The second challenge is that RS integrates belowground heterotrophic (RH) and autotrophic (RA) activity, whereas modelers generally prefer partitioned fluxes, and few models include an explicit RS output. Opportunities exist to use the total RS flux for data assimilation and model benchmarking methods rather than less-certain partitioned fluxes. Pushing for more experiments that not only partition RS but also monitor the age of RA and RH, as well as for the development of belowground RA components in models, would allow for more direct comparison between measured and modeled values. The third challenge is that soil respiration is generally measured at a very different resolution than that needed for comparison to EC or ecosystem- to global-scale models. Measuring soil fluxes with finer spatial resolution and more extensive coverage, and downscaling EC fluxes to match the scale of RS, will improve chamber and tower comparisons. Opportunities also exist to estimate RH at regional scales by implementing decomposition functional types, akin to plant functional

  6. Respirator Filter Efficiency Testing Against Particulate and Biological Aerosols Under Moderate to High Flow Rates

    Science.gov (United States)

    2006-08-01

    flow rate through the test filter. The flow rate was measured using a mass flow meter (Series 4000, TSI, Shoreview, MN). Several modifications were made...operating conditions. This included assessing the effect of non- isokinetic sampling, flow calibrations, and characterization of the challenge...sampling bias on the measured penetrations due to the non- isokinetic sampling downstream. 3.3.2.2 System Characterization. Shakedown tests were

  7. Soil Respiration under Different Land Uses in Eastern China

    Science.gov (United States)

    Fan, Li-Chao; Yang, Ming-Zhen; Han, Wen-Yan

    2015-01-01

    Land-use change has a crucial influence on soil respiration, which further affects soil nutrient availability and carbon stock. We monitored soil respiration rates under different land-use types (tea gardens with three production levels, adjacent woodland, and a vegetable field) in Eastern China at weekly intervals over a year using the dynamic closed chamber method. The relationship between soil respiration and environmental factors was also evaluated. The soil respiration rate exhibited a remarkable single peak that was highest in July/August and lowest in January. The annual cumulative respiration flux increased by 25.6% and 20.9% in the tea garden with high production (HP) and the vegetable field (VF), respectively, relative to woodland (WL). However, no significant differences were observed between tea gardens with medium production (MP), low production (LP), WL, and VF. Soil respiration rates were significantly and positively correlated with organic carbon, total nitrogen, and available phosphorous content. Each site displayed a significant exponential relationship between soil respiration and soil temperature measured at 5 cm depth, which explained 84–98% of the variation in soil respiration. The model with a combination of soil temperature and moisture was better at predicting the temporal variation of soil respiration rate than the single temperature model for all sites. Q10 was 2.40, 2.00, and 1.86–1.98 for VF, WL, and tea gardens, respectively, indicating that converting WL to VF increased and converting to tea gardens decreased the sensitivity of soil respiration to temperature. The equation of the multiple linear regression showed that identical factors, including soil organic carbon (SOC), soil water content (SWC), pH, and water soluble aluminum (WSAl), drove the changes in soil respiration and Q10 after conversion of land use. Temporal variations of soil respiration were mainly controlled by soil temperature, whereas spatial variations were

  8. Determination of respiration rates in water with sub-micromolar oxygen concentrations

    Directory of Open Access Journals (Sweden)

    Emilio Garcia-Robledo

    2016-11-01

    Full Text Available It is crucial for our study and understanding of element transformations in low-oxygen waters that we are able to reproduce the in situ conditions during laboratory incubations to an extent that does not result in unacceptable artefacts. In this study we have explored how experimental conditions affect measured rates of O2 consumption in low-O2 waters from the anoxic basin of Golfo Dulce (Costa Rica and oceanic waters off Chile-Peru. High-sensitivity optode dots placed within all-glass incubation containers allowed for high resolution O2 concentration measurements in the nanomolar and low µmolar range and thus also for the determination of rates of oxygen consumption by microbial communities. Consumption rates increased dramatically (from 3 and up to 60 times by prolonged incubations, and started to increase after 4-5 hours in surface waters and after 10-15 h in water from below the upper mixed layer. Estimated maximum growth rates during the incubations suggest the growth of opportunistic microorganism with doubling times as low as 2.8 and 4.6 h for the coastal waters of Golfo Dulce (Costa Rica and oceanic waters off Chile and Peru, respectively. Deoxygenation by inert gas bubbling led to increases in subsequently determined rates, possibly by liberation of organics from lysis of sensitive organisms, particle or aggregate alterations or other processes mediated by the strong turbulence. Stirring of the water during the incubation led to an about 50% increase in samples previously deoxygenated by bubbling, but had no effect in untreated samples. Our data indicate that data for microbial activity obtained by short incubations of minimally manipulated water are most reliable, but deoxygenation is a prerequisite for many laboratory experiments, such as determination of denitrification rates, as O2 contamination by sampling is practically impossible to avoid.

  9. How much work is expended for respiration?

    Science.gov (United States)

    Johnson, A T

    1993-01-01

    The rate of work expended to move air in the respiratory system has been determined for five different airflow waveshapes, a non-linear respiratory model and five exercise levels. As expected, the rectangular waveshape was the most efficient. Model conditions were then changed one a time: (i) starting lung volume was allowed to vary, (ii) exhalation flow limitation was added, (iii) respiration was considered to be a metabolic burden determining part of the ventilation requirement and (iv) a respirator mask was added. Although there is no direct work advantage to varying initial lung volume, such volume changes appear to be dictated by the asymmetry of lung recoil pressure about the lung relaxation volume; allowing the work of respiration to become a metabolic burden clearly shows why respiratory waveforms change from rest to exercise; and, adding a respirator imposes a severe respiratory burden on the wearer engaging in moderate, heavy and very heavy exercise.

  10. Effect of the Storage Temperature, Duration and Gamma Irradiation on the Respiration Rate and Sugar Content of Minituber 'Superior'

    International Nuclear Information System (INIS)

    Lim, J.H.; Hwangbo, J.K.; Baek, M.H.; Kim, J.H.; Kim, J.S.; Lee, M.C.

    2005-01-01

    This study was to evaluate whether ionizing gamma radiation could be applied to break the dormancy of a potato minituber. The respiration rate of the minitubers was significantly affected by the storage temperature and a low dose gamma radiation. Ionizing radiation of 8 Gy enhanced the respiration rate of the potato tuber stored at 10°C for 20 days. The potato tuber subjected to 4 and 8 Gy after 40 days storage at 10 and 10°C exhibited higher respiration rates compared to the control (non-irradiated), but not at st. However, the ionizing radiation did not exhibit on significant effect on the respiration rate of the potato tuber stored for 60 days. It was observed that minitubers stored for 20 days had significant response to the storage temperature in terms of the total sugar content the higher the storage temperature, the lower the total sugar content. It was measured that the reducing sugar content was increased under the storage conditions both 5 and 10°C for 40 days, but not to 20°C. The total sugar contents in the minituber stored for 60 days were similar to those stored for 40 days. The data was discussed on the relationships among the storage duration, temperature and ionizing radiation. (author)

  11. Evaluating a new method to estimate the rate of leaf respiration in the light by analysis of combined gas exchange and chlorophyll fluorescence measurements

    NARCIS (Netherlands)

    Yin, X.; Sun, Z.; Struik, P.C.; Gu, J.

    2011-01-01

    Day respiration (R(d)) is an important parameter in leaf ecophysiology. It is difficult to measure directly and is indirectly estimated from gas exchange (GE) measurements of the net photosynthetic rate (A), commonly using the Laisk method or the Kok method. Recently a new method was proposed to

  12. Ecosystem function in oil sands wetlands : rates of detrital decomposition, moss growth, and microbial respiration in oilsands wetlands

    Energy Technology Data Exchange (ETDEWEB)

    Wytrykush, C. [Windsor Univ., ON (Canada); Hornung, J. [Petro-Canada, Calgary, AB (Canada)

    2007-07-01

    A study was conducted in which leaf litter breakdown and biomass accrual in 31 reference and oilsands affected (OSPM) wetlands in Northeastern Alberta was examined. The purpose was to determine how the decomposition of dead plant matter controls the primary productivity in wetlands. The data collected from this study will provide information about carbon flow and dynamics in oilsands affected wetlands. The study involved the investigation of wetlands that contrasted in water origin (OSPM vs. reference), sediment origin (OSPM vs. natural), sediment organic content and age. Mesh bags containing 5 g of dried Typha (cattail) or 20 g of damp moss were placed into 31 wetlands in order to monitor the rate at which biomass was lost to decomposition, as measured by changes in dry mass. After 1 year, moss growth was found to be greatest in younger wetlands with natural sediments. Cattail decomposition was found to be slower in wetlands containing OSPM water than that in reference wetlands. Preliminary analysis of respiration rates of biota associated with decomposing cattail indicate that the amount of oxygen consumed is not affected by wetland water source, sediment source, level of initial sediment organic content, or age.

  13. Reducing Uncertainty in the Daycent Model of Heterotrophic Respiration with a More Mechanistic Representation of Microbial Processes.

    Science.gov (United States)

    Berardi, D.; Gomez-Casanovas, N.; Hudiburg, T. W.

    2017-12-01

    Improving the certainty of ecosystem models is essential to ensuring their legitimacy, value, and ability to inform management and policy decisions. With more than a century of research exploring the variables controlling soil respiration, a high level of uncertainty remains in the ability of ecosystem models to accurately estimate respiration with changing climatic conditions. Refining model estimates of soil carbon fluxes is a high priority for climate change scientists to determine whether soils will be carbon sources or sinks in the future. We found that DayCent underestimates heterotrophic respiration by several magnitudes for our temperate mixed conifer forest site. While traditional ecosystem models simulate decomposition through first order kinetics, recent research has found that including microbial mechanisms explains 20 percent more spatial heterogeneity. We manipulated the DayCent heterotrophic respiration model to include a more mechanistic representation of microbial dynamic and compared the new model with continuous and survey observations from our experimental forest site in the Northern Rockies ecoregion. We also calibrated the model's sensitivity to soil moisture and temperature to our experimental data. We expect to improve the accuracy of the model by 20-30 percent. By using a more representative and calibrated model of soil carbon dynamics, we can better predict feedbacks between climate and soil carbon pools.

  14. Ballast minerals and the sinking carbon flux in the ocean: carbon-specific respiration rates and sinking velocity of marine snow aggregates

    Directory of Open Access Journals (Sweden)

    M. H. Iversen

    2010-09-01

    Full Text Available Recent observations have shown that fluxes of ballast minerals (calcium carbonate, opal, and lithogenic material and organic carbon fluxes are closely correlated in the bathypelagic zones of the ocean. Hence it has been hypothesized that incorporation of biogenic minerals within marine aggregates could either protect the organic matter from decomposition and/or increase the sinking velocity via ballasting of the aggregates. Here we present the first combined data on size, sinking velocity, carbon-specific respiration rate, and composition measured directly in three aggregate types; Emiliania huxleyi aggregates (carbonate ballasted, Skeletonema costatum aggregates (opal ballasted, and aggregates made from a mix of both E. huxleyi and S. costatum (carbonate and opal ballasted. Overall average carbon-specific respiration rate was ~0.13 d−1 and did not vary with aggregate type and size. Ballasting from carbonate resulted in 2- to 2.5-fold higher sinking velocities than those of aggregates ballasted by opal. We compiled literature data on carbon-specific respiration rate and sinking velocity measured in aggregates of different composition and sources. Compiled carbon-specific respiration rates (including this study vary between 0.08 d−1 and 0.20 d−1. Sinking velocity increases with increasing aggregate size within homogeneous sources of aggregates. When compared across different particle and aggregate sources, however, sinking velocity appeared to be independent of particle or aggregate size. The carbon-specific respiration rate per meter settled varied between 0.0002 m−1 and 0.0030 m−1, and decreased with increasing aggregate size. It was lower for calcite ballasted aggregates as compared to that of similar sized opal ballasted aggregates.

  15. The effect of airflow rates and aeration mode on the respiration activity of four organic wastes: Implications on the composting process.

    Science.gov (United States)

    Mejias, Laura; Komilis, Dimitrios; Gea, Teresa; Sánchez, Antoni

    2017-07-01

    The aim of this study was to assess the effect of the airflow and of the aeration mode on the composting process of non-urban organic wastes that are found in large quantities worldwide, namely: (i) a fresh, non-digested, sewage sludge (FSS), (ii) an anaerobically digested sewage sludge (ADSS), (iii) cow manure (CM) and (iv) pig sludge (PS). This assessment was done using respirometric indices. Two aeration modes were tested, namely: (a) a constant air flowrate set at three different initial fixed airflow rates, and (b) an oxygen uptake rate (OUR)-controlled airflow rate. The four wastes displayed the same behaviour namely a limited biological activity at low aeration, while, beyond a threshold value, the increase of the airflow did not significantly increase the dynamic respiration indices (DRI 1 max , DRI 24 max and AT 4 ). The threshold airflow rate varied among wastes and ranged from 42NL air kg -1 DMh -1 for CM and from 67 to 77NL air kg -1 DMh -1 for FSS, ADSS and PS. Comparing the two aeration modes tested (constant air flow, OUR controlled air flow), no statistically significant differences were calculated between the respiration activity indices obtained at those two aeration modes. The results can be considered representative for urban and non-urban organic wastes and establish a general procedure to measure the respiration activity without limitations by airflow. This will permit other researchers to provide consistent results during the measurement of the respiration activity. Results indicate that high airflows are not required to establish the maximum respiration activity. This can result in energy savings and the prevention of off-gas treatment problems due to the excessive aeration rate in full scale composting plants. Copyright © 2017 Elsevier Ltd. All rights reserved.

  16. Respiration rates in forest soil organic horizon materials treated with simulated acid rain

    Energy Technology Data Exchange (ETDEWEB)

    Salonius, P O

    1990-01-01

    The entire organic horizon above the mineral soil was collected under a mature black spruce (Picea mariana) stand in central New Brunswick. The organic horizon consisted of litter, fermentation, and humus layers of 1.5, 4.0, and 1.0 cm depths respectively. In concert with a series of simulated rain experiments, which dealt with the effects of acid precipitation of pH 4.6, 3.6, and 2.6 compared with controls at pH 5.6 on germination and early growth of forest tree seedlings, 30 randomly distributed, unplanted tubes in each rain chamber were exposed to treatment during each of the 5-week treatments of the various tree species. During the experiments, ca 315 mm of simulated rain was deposited on the soil surfaces in the tube containers. Marked decreases in soil microbial activity were found only with pH 2.6 rain, but responsiveness to increasing temperature was lower as rain of greater acidity was applied to the soil. Ammonium nitrogen mineralization rates were not affected by treatment of soil with acidified precipitation. 26 refs., 3 figs., 1 tab.

  17. A mechanical breathing simulator for respirator test

    International Nuclear Information System (INIS)

    Murata, Mikio; Ikezawa, Yoshio; Yoshida, Yoshikazu

    1976-01-01

    A mechanical breathing simulator has been developed to produce the human respiration for use in respirator test. The respirations were produced through the strokes of piston controlled by a rockerarm with adjustable fulcrum. The respiration rate was governed by motor-speed control, independent of the tidal volume achieved by adjustment of the piston stroke. By the breather, the simulated respirations for work rate 0, 208, 415, 622 and 830 kg-m/min could be produced through the typical dummy head. (auth.)

  18. Monitoring oral temperature, heart rate, and respiration rate of West Indian manatees (Trichechus manatus) during capture and handling in the field

    Science.gov (United States)

    Wong, Arthur W.; Bonde, Robert K.; Siegal-Willott, Jessica; Stamper, M. Andrew; Colee, James; Powell, James A.; Reid, James P.; Deutsch, Charles J.; Harr, Kendal E.

    2012-01-01

    West Indian manatees (Trichechus manatus) are captured, handled, and transported to facilitate conservation, research, and rehabilitation efforts. Monitoring manatee oral temperature (OT), heart rate (HR), and respiration rate (RR) during out-of-water handling can assist efforts to maintain animal well-being and improve medical response to evidence of declining health. To determine effects of capture on manatee vital signs, we monitored OT, HR, and RR continuously for a 50-min period in 38 healthy, awake, juvenile and adult Florida manatees (T. m. latirostris) and 48 similar Antillean manatees (T. m. manatus). We examined creatine kinase (CK), potassium (K+), serum amyloid A (SAA), and lactate values for each animal to assess possible systemic inflammation and muscular trauma. OT range was 29.5 to 36.2° C, HR range was 32 to 88 beats/min, and RR range was 0 to 17 breaths/5 min. Antillean manatees had higher initial OT, HR, and RR than Florida manatees (p capture and handling in the field or in a captive care setting.

  19. Global variability in leaf respiration in relation to climate and leaf traits

    Science.gov (United States)

    Atkin, Owen K.

    2015-04-01

    Leaf respiration plays a vital role in regulating ecosystem functioning and the Earth's climate. Because of this, it is imperative that that Earth-system, climate and ecosystem-level models be able to accurately predict variations in rates of leaf respiration. In the field of photosynthesis research, the F/vC/B model has enabled modellers to accurately predict variations in photosynthesis through time and space. By contrast, we lack an equivalent biochemical model to predict variations in leaf respiration. Consequently, we need to rely on phenomenological approaches to model variations in respiration across the Earth's surface. Such approaches require that we develop a thorough understanding of how rates of respiration vary among species and whether global environmental gradients play a role in determining variations in leaf respiration. Dealing with these issues requires that data sets be assembled on rates of leaf respiration in biomes across the Earth's surface. In this talk, I will use a newly-assembled global database on leaf respiration and associated traits (including photosynthesis) to highlight variation in leaf respiration (and the balance between respiration and photosynthesis) across global gradients in growth temperature and aridity.

  20. Can we distinguish autotrophic respiration from heterotrophic respiration in a field site using high temporal resolution CO2 flux measurements?

    Science.gov (United States)

    Biro, Beatrice; Berger, Sina; Praetzel, Leandra; Blodau, Christian

    2016-04-01

    The processes behind C-cycling in peatlands are important to understand for assessing the vulnerability of peatlands as carbon sinks under changing climate conditions. Especially boreal peatlands are likely to underlie strong alterations in the future. It is expected that C-pools that are directly influenced by vegetation and water table fluctuations can be easily destabilized. The CO2 efflux through respiration underlies autotrophic and heterotrophic processes that show different feedbacks on changing environmental conditions. In order to understand the respiration fluxes better for more accurate modelling and prognoses, the determination of the relative importance of different respiration sources is necessary. Earlier studies used e.g. exfoliation experiments, incubation experiments or modelling approaches to estimate the different respiration sources for the total ecosystem respiration (Reco). To further the understanding in this topic, I want to distinguish autotrophic and heterotrophic respiration using high temporal resolution measurements. The study site was selected along a hydrological gradient in a peatland in southern Ontario (Canada) and measurements were conducted from May to September 2015 once per month. Environmental controls (water table, soil temperature and soil moisture) that effect the respiration sources were recorded. In my study I used a Li-COR 6400XT and a Los Gatos greenhouse gas analyzer (GGA). Reco was determined by chamber flux measurements with the GGA, while simultaneously CO2 respiration measurements on different vegetation compartments like roots, leaves and mosses were conducted using the Li-COR 6400XT. The difference between Reco and autotrophic respiration equals heterotrophic respiration. After the measurements, the vegetation plots were harvested and separated for all compartments (leaves, roots, mosses, soil organic matter), dried and weighed. The weighted respiration rates from all vegetation compartments sum up to

  1. Airborne release fractions/rates and respirable fractions for nonreactor nuclear facilities. Volume 1, Analysis of experimental data

    International Nuclear Information System (INIS)

    1994-12-01

    This handbook contains (1) a systematic compilation of airborne release and respirable fraction experimental data for nonreactor nuclear facilities, (2) assessments of the data, and (3) values derived from assessing the data that may be used in safety analyses when the data are applicable. To assist in consistent and effective use of this information, the handbook provides: identification of a consequence determination methodology in which the information can be used; discussion of the applicability of the information and its general technical limits; identification of specific accident phenomena of interest for which the information is applicable; and examples of use of the consequence determination methodology and airborne release and respirable fraction information

  2. Does a General Temperature-Dependent Q10 Model of Soil Respiration Exist at Biome and Global Scale?

    Institute of Scientific and Technical Information of China (English)

    Hua CHEN; Han-Qin TIAN

    2005-01-01

    Soil respiration (SR) is commonly modeled by a Q10 (an indicator of temperature sensitivity)function in ecosystem models. Q10is usually treated as a constant of 2 in these models, although Q10 value of SR often decreases with increasing temperatures. It remains unclear whether a general temperaturedependent Q10 model of SR exists at biome and global scale. In this paper, we have compiled the long-term Q10 data of 38 SR studies ranging from the Boreal, Temperate, to Tropical/Subtropical biome on four continents.Our analysis indicated that the general temperature-dependent biome Q10 models of SR existed, especially in the Boreal and Temperate biomes. A single-exponential model was better than a simple linear model in fitting the average Q10 values at the biome scale. Average soil temperature is a better predictor of Q10 value than average air temperature in these models, especially in the Boreal biome. Soil temperature alone could explain about 50% of the Q10 variations in both the Boreal and Temperate biome single-exponential Q10 model. Q10 value of SR decreased with increasing soil temperature but at quite different rates among the three biome Q10 models. The k values (Q10 decay rate constants) were 0.09, 0.07, and 0.02/℃ in the Boreal, Temperate, and Tropical/Subtropical biome, respectively, suggesting that Q10 value is the most sensitive to soil temperature change in the Boreal biome, the second in the Temperate biome, and the least sensitive in the Tropical/Subtropical biome. This also indirectly confirms that acclimation of SR in many soil warming experiments probably occurs. The k value in the "global" single-exponential Q10 model which combined both the Boreal and Temperate biome data set was 0.08/℃. However, the global general temperature-dependent Q10model developed using the data sets of the three biomes is not adequate for predicting Q10 values of SR globally.The existence of the general temperature-dependent Q10 models of SR in the Boreal and

  3. Tropical rainforest carbon sink declines during El Niño as a result of reduced photosynthesis and increased respiration rates.

    Science.gov (United States)

    Cavaleri, Molly A; Coble, Adam P; Ryan, Michael G; Bauerle, William L; Loescher, Henry W; Oberbauer, Steven F

    2017-10-01

    Changes in tropical forest carbon sink strength during El Niño Southern Oscillation (ENSO) events can indicate future behavior under climate change. Previous studies revealed ˜6 Mg C ha -1  yr -1 lower net ecosystem production (NEP) during ENSO year 1998 compared with non-ENSO year 2000 in a Costa Rican tropical rainforest. We explored environmental drivers of this change and examined the contributions of ecosystem respiration (RE) and gross primary production (GPP) to this weakened carbon sink. For 1998-2000, we estimated RE using chamber-based respiration measurements, and we estimated GPP in two ways: using (1) the canopy process model MAESTRA, and (2) combined eddy covariance and chamber respiration data. MAESTRA-estimated GPP did not statistically differ from GPP estimated using approach 2, but was ˜ 28% greater than published GPP estimates for the same site and years using eddy covariance data only. A 7% increase in RE (primarily increased soil respiration) and a 10% reduction in GPP contributed equally to the difference in NEP between ENSO year 1998 and non-ENSO year 2000. A warming and drying climate for tropical forests may yield a weakened carbon sink from both decreased GPP and increased RE. Understanding physiological acclimation will be critical for the large carbon stores in these ecosystems. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  4. Estimation of soil respiration rates and soil gas isotopic composition for the different land use of Ultisols from Calhoun CZO.

    Science.gov (United States)

    Cherkinsky, A.; Brecheisen, Z.; Richter, D. D., Jr.; Sheng, H.

    2017-12-01

    CO2 flux from soil is significant in most ecosystems and can account for more than 2/3 of total ecosystem respiration. In many cases CO2 fluxes from soil are estimated using eddy covariance techniques or the classical chamber method with measures of bulk concentrations and isotope composition of CO2. Whereas most of these studies estimate flux from the soil surface, we analyzed its concentration and isotope composition directly in soil profiles down to 8.5m depth. This experiment was conducted in Sumter National Forest in summer of 2016. The samples were collected from 3 different land use history sites: a) reference hardwood stands, mainly of oak and hickory that are taken to be never cultivated; b) cultivated plots, which were also used growing cotton prior to the 1950's but for the last 50 years for growing corn, wheat, legume, sorghum, and sunflowers; c) pine stands, which had been used for growing cotton from beginning of the 19th century and then was abandoned in 1920s and planted with loblolly pine. We have analyzed 3 replicates of each land use. There were measured in the field CO2 and O2 concentration and collected gas samples were analyzed for Δ14C, δ13C and δ18O. CO2 concentration in all types of land use has a maximum about 3m depth, approximately the same depth as the minimum of O2 concentration. Isotope analyses revealed that carbon isotopic composition tend to become lighter with the depth for all three types of land use: in cultivated site it changes from -18%o at 0.5m to -21%o at 5m; in pine site from -22%o to -25%o and in hardwood from-21.5 -24.5%o correspondently, the O2 isotopic composition does not change significantly. Based on analysis of Δ14C the turnover rate of CO2 is getting slower as depth increases. At the first 50 cm the exchange rate is the fastest on cultivated site, likely due to annual tilling, and concentration of 14C is actually equal to atmospheric. However, the turnover rate of Δ14C in soil CO2 slows down significantly as

  5. The activity of ascorbic acid and catechol oxidase, the rate of photosynthesis and respiration as related to plant organs, stage of development and copper supply

    Directory of Open Access Journals (Sweden)

    St. Łyszcz

    2015-06-01

    Full Text Available Some experiments were performed to investigate the physiological role of copper in oat and sunflower and to recognize some effects of copper deficiency. Oat and sunflower plants were grown in pots on a peat soil under copper deficiency conditions (–Cu or with the optimal copper supply (+Cu. In plants the following measurements were carried out: 1 the activity of ascorbic acid oxidase (AAO and of catechol oxidase (PPO in different plant organs and at different stages of plant development, 2 the activity and the rate of photosynthesis, 3 the activity of RuDP-carboxylase, 4 the intensity of plant respiration. The activity of AAO and of PPO, and also the rate and the activity of photosynthesis were significantly lower under conditions of copper deficiency. The activity of both discussed oxidases depended on: 1 the plant species, 2 plant organs, 3 stage of plant development. Copper deficiency caused decrease of the respiration intensity of sunflower leaves but it increased to some extent the respiration of oat tops. Obtained results are consistent with the earlier suggestion of the authors that the PPO activity in sunflower leaves could be a sensitive indicator of copper supply of the plants, farther experiments are in progress.

  6. High rates of sulfate reduction in a low-sulfate hot spring microbial mat are driven by a low level of diversity of sulfate-respiring microorganisms

    DEFF Research Database (Denmark)

    Dillon, Jesse G; Fishbain, Susan; Miller, Scott R

    2007-01-01

    The importance of sulfate respiration in the microbial mat found in the low-sulfate thermal outflow of Mushroom Spring in Yellowstone National Park was evaluated using a combination of molecular, microelectrode, and radiotracer studies. Despite very low sulfate concentrations, this mat community...... was shown to sustain a highly active sulfur cycle. The highest rates of sulfate respiration were measured close to the surface of the mat late in the day when photosynthetic oxygen production ceased and were associated with a Thermodesulfovibrio-like population. Reduced activity at greater depths...... was correlated with novel populations of sulfate-reducing microorganisms, unrelated to characterized species, and most likely due to both sulfate and carbon limitation....

  7. Plant growth and respiration re-visited: maintenance respiration defined – it is an emergent property of, not a separate process within, the system – and why the respiration : photosynthesis ratio is conservative

    Science.gov (United States)

    Thornley, John H. M.

    2011-01-01

    Background and Aims Plant growth and respiration still has unresolved issues, examined here using a model. The aims of this work are to compare the model's predictions with McCree's observation-based respiration equation which led to the ‘growth respiration/maintenance respiration paradigm’ (GMRP) – this is required to give the model credibility; to clarify the nature of maintenance respiration (MR) using a model which does not represent MR explicitly; and to examine algebraic and numerical predictions for the respiration:photosynthesis ratio. Methods A two-state variable growth model is constructed, with structure and substrate, applicable on plant to ecosystem scales. Four processes are represented: photosynthesis, growth with growth respiration (GR), senescence giving a flux towards litter, and a recycling of some of this flux. There are four significant parameters: growth efficiency, rate constants for substrate utilization and structure senescence, and fraction of structure returned to the substrate pool. Key Results The model can simulate McCree's data on respiration, providing an alternative interpretation to the GMRP. The model's parameters are related to parameters used in this paradigm. MR is defined and calculated in terms of the model's parameters in two ways: first during exponential growth at zero growth rate; and secondly at equilibrium. The approaches concur. The equilibrium respiration:photosynthesis ratio has the value of 0·4, depending only on growth efficiency and recycling fraction. Conclusions McCree's equation is an approximation that the model can describe; it is mistaken to interpret his second coefficient as a maintenance requirement. An MR rate is defined and extracted algebraically from the model. MR as a specific process is not required and may be replaced with an approach from which an MR rate emerges. The model suggests that the respiration:photosynthesis ratio is conservative because it depends on two parameters only whose

  8. Comparison of primary production and pelagic community respiration rates in the coastal zone of the Gulf of Gdansk

    Directory of Open Access Journals (Sweden)

    Joanna K. York

    2001-09-01

    Full Text Available The organic matter production/respiration balance in the coastal water column was examined, both the primary production and community respiration being measured with the oxygen light-and-dark bottle method. Community respiration (CR was always lower than the gross primary production (GPP measured at a standard light intensity of 390 µE m-2 s-1, which amounted, on average, to 30% of GPP. During most of the in situ sampling period, the coastal system (6-7 m depth was found to be autotrophic, with depth-integrated GPP ranging from 6.7 mmoles O2 m-2 d-1 in December to 214.2 mmoles O2 m-2 d-1 in August, and CR ranging correspondingly from 6.0 to 177.7 mmoles O2 m-2 d-1. However, on some occasions heterotrophic conditions were recorded: depth-integrated GPP

  9. Contribution of Root Respiration to Soil Respiration in Sugarcane Plantation in Thailand

    OpenAIRE

    Wilaiwan Sornpoon; Sebastien Bonnet; Poonpipope Kasemsap; Savitri Garivait

    2013-01-01

    The understanding on the contribution of root respiration to total soil respiration is still very limited, especially for sugarcane. In this study, trenching experiments in sugarcane plantations were conducted to separate and investigate soil respiration for this crop. The measurements were performed for the whole growing period of 344 days to quantify root respiration. The obtained monitoring data showed that the respiration rate is increasing with the age of the plant, accounting for up to ...

  10. Relaxed Poisson cure rate models.

    Science.gov (United States)

    Rodrigues, Josemar; Cordeiro, Gauss M; Cancho, Vicente G; Balakrishnan, N

    2016-03-01

    The purpose of this article is to make the standard promotion cure rate model (Yakovlev and Tsodikov, ) more flexible by assuming that the number of lesions or altered cells after a treatment follows a fractional Poisson distribution (Laskin, ). It is proved that the well-known Mittag-Leffler relaxation function (Berberan-Santos, ) is a simple way to obtain a new cure rate model that is a compromise between the promotion and geometric cure rate models allowing for superdispersion. So, the relaxed cure rate model developed here can be considered as a natural and less restrictive extension of the popular Poisson cure rate model at the cost of an additional parameter, but a competitor to negative-binomial cure rate models (Rodrigues et al., ). Some mathematical properties of a proper relaxed Poisson density are explored. A simulation study and an illustration of the proposed cure rate model from the Bayesian point of view are finally presented. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Cattle respiration facility

    DEFF Research Database (Denmark)

    Hellwing, Anne Louise Frydendahl; Lund, Peter; Weisbjerg, Martin Riis

    2012-01-01

    In Denmark, the emission rate of methane from dairy cows has been calculated using the IPCC standard values for dairy cows in Western countries, due to the lack of national data. Therefore, four respiration chambers for dairy cows were built with the main purpose of measuring methane, but also...

  12. [Effects of management regime on soil respiration from agroecosystems].

    Science.gov (United States)

    Chen, Shu-tao; Zhu, Da-wei; Niu, Chuan-po; Zou, Jian-wen; Wang, Chao; Sun, Wen-juan

    2009-10-15

    normalized soil respiration against the temperature, the exponential relationship between these two parameters becomes obvious. The temperature coefficient Q10 was then evaluated as 1.66 according to the exponential relationship. Further investigation indicated that soil respiration could be well simulated by an empirical model in which the effects of both soil temperature and moisture on soil respiration were considered. This model described 54% variances of the measured 463 soil respiration rates, with a R2 of 0.54 and a p value less than 0.0001.

  13. Taxa de respiração de cenouras minimamente processadas e armazenadas em diferentes temperaturas Respiration rate of storage processed carrots at different temperatures

    Directory of Open Access Journals (Sweden)

    Wigberto Antonio Spagnol

    2006-09-01

    Full Text Available Entre as hortaliças minimamente processadas, a cenoura é uma das mais populares, sendo comercializada de várias maneiras: raladas, cortadas em fatias, palitos, e ainda apresentadas na forma de mini-cenoura (baby carrot. O objetivo deste estudo foi determinar as taxas respiratórias de cenouras (Daucus carota da cultivar Nantes minimamente processadas. O armazenamento foi realizado nas temperaturas de 1 °C, 5 °C e 11 °C, e 90% UR. A taxa respiratória foi determinada usando um fluxo contínuo de ar. O teor de CO2 e etileno foi medido por um cromatógrafo a gás. A taxa de respiração para as cenouras fatiadas foi mais alta do que para os produtos inteiros. Os valores da energia de ativação obtidos para as cenouras fatiadas e inteiras foi de 69,82 kJmol-1 e 54,60 kJmol-1, respectivamente. A produção de etileno foi insignificante para as cenouras durante os 14 dias de armazenamento.The carrot is one of the most popular vegetables from minimally processed vegetables. It is commercialized in many different ways: shreds, slices, sticks and baby carrots. The aim of this work is to determine the respiration rate of minimally processed carrots. They were in storage at temperatures of 1 °C, 5 °C and 11 °C, and 90% RH. The respiration rate was determined using continuous humidification airflow and measuring the CO2 concentration using a gas chromatograph connected to a microcomputer. The respiration rates of the minimally processed carrots showed a higher respiration rate than for the whole products. The activation energy values calculated for the minimally processed carrots corresponded to 69.82 kJmol-1 for the whole products. The ethylene production for the carrots remained insignificant throughout the 14 days of storage.

  14. Respiration and substrate transport rates as well as reactive oxygen species production distinguish mitochondria from brain and liver.

    Science.gov (United States)

    Gusdon, Aaron M; Fernandez-Bueno, Gabriel A; Wohlgemuth, Stephanie; Fernandez, Jenelle; Chen, Jing; Mathews, Clayton E

    2015-09-10

    Aberrant mitochondrial function, including excessive reactive oxygen species (ROS) production, has been implicated in the pathogenesis of human diseases. The use of mitochondrial inhibitors to ascertain the sites in the electron transport chain (ETC) resulting in altered ROS production can be an important tool. However, the response of mouse mitochondria to ETC inhibitors has not been thoroughly assessed. Here we set out to characterize the differences in phenotypic response to ETC inhibitors between the more energetically demanding brain mitochondria and less energetically demanding liver mitochondria in commonly utilized C57BL/6J mice. We show that in contrast to brain mitochondria, inhibiting distally within complex I or within complex III does not increase liver mitochondrial ROS production supported by complex I substrates, and liver mitochondrial ROS production supported by complex II substrates occurred primarily independent of membrane potential. Complex I, II, and III enzymatic activities and membrane potential were equivalent between liver and brain and responded to ETC. inhibitors similarly. Brain mitochondria exhibited an approximately two-fold increase in complex I and II supported respiration compared with liver mitochondria while exhibiting similar responses to inhibitors. Elevated NADH transport and heightened complex II-III coupled activity accounted for increased complex I and II supported respiration, respectively in brain mitochondria. We conclude that important mechanistic differences exist between mouse liver and brain mitochondria and that mouse mitochondria exhibit phenotypic differences compared with mitochondria from other species.

  15. Derivation and analysis of cross relations of photosynthesis and respiration across at FLUXNET sites for model improvement

    Science.gov (United States)

    Lasslop, G.; Reichstein, M.; Papale, D.; Richardson, A. D.

    2009-12-01

    The FLUXNET database provides measurements of the net ecosystem exchange (NEE) of carbon across vegetation types and climate regions. To simplify the interpretation in terms of processes the net exchange is frequently split up into the two main components: gross primary production (GPP) and ecosystem respiration (Reco). A strong relation between these two fluxes related derived from eddy covariance data was found across temporal scales and is to be expected as variation in recent photosynthesis is known to be correlated with root respiration; plants use energy from photosynthesis to drive the metabolism. At long time scales, substrate availability (constrained by past productivity) limits the whole-ecosystem respiration. Previous studies exploring this relationship relied on GPP and Reco estimates derived from the same data, this may lead to spurious correlation that must not be interpreted ecologically. In this study we use two estimates derived from disjunct datasets, one based on daytime data, the other on nighttime data and explore the reliability and robustness of this relationship. We find distinct relationship between the two, varying between vegetation types but also across temporal and spatial scales. We also infer that spatial and temporal variability of net ecosystem exchange is driven by GPP in many cases. Exceptions to this rule include for example disturbed sites. We advocate that for model calibration and evaluation not only the fluxes itself but also robust patterns between fluxes that can be extracted from the database, for instance between the flux components, should be considered.

  16. Relationship between root water uptake and soil respiration: A modeling perspective

    Science.gov (United States)

    Teodosio, Bertrand; Pauwels, Valentijn R. N.; Loheide, Steven P.; Daly, Edoardo

    2017-08-01

    Soil moisture affects and is affected by root water uptake and at the same time drives soil CO2 dynamics. Selecting root water uptake formulations in models is important since this affects the estimation of actual transpiration and soil CO2 efflux. This study aims to compare different models combining the Richards equation for soil water flow to equations describing heat transfer and air-phase CO2 production and flow. A root water uptake model (RWC), accounting only for root water compensation by rescaling water uptake rates across the vertical profile, was compared to a model (XWP) estimating water uptake as a function of the difference between soil and root xylem water potential; the latter model can account for both compensation (XWPRWC) and hydraulic redistribution (XWPHR). Models were compared in a scenario with a shallow water table, where the formulation of root water uptake plays an important role in modeling daily patterns and magnitudes of transpiration rates and CO2 efflux. Model simulations for this scenario indicated up to 20% difference in the estimated water that transpired over 50 days and up to 14% difference in carbon emitted from the soil. The models showed reduction of transpiration rates associated with water stress affecting soil CO2 efflux, with magnitudes of soil CO2 efflux being larger for the XWPHR model in wet conditions and for the RWC model as the soil dried down. The study shows the importance of choosing root water uptake models not only for estimating transpiration but also for other processes controlled by soil water content.

  17. Inflation Rate Modelling in Indonesia

    Directory of Open Access Journals (Sweden)

    Rezzy Eko Caraka

    2016-10-01

    Full Text Available The purposes of this research were to analyse: (i Modelling the inflation rate in Indonesia with parametric regression. (ii Modelling the inflation rate in Indonesia using non-parametric regression spline multivariable (iii Determining the best model the inflation rate in Indonesia (iv Explaining the relationship inflation model parametric and non-parametric regression spline multivariable. Based on the analysis using the two methods mentioned the coefficient of determination (R2 in parametric regression of 65.1% while non-parametric amounted to 99.39%. To begin with, the factor of money supply or money stock, crude oil prices and the rupiah exchange rate against the dollar is significant on the rate of inflation. The stability of inflation is essential to support sustainable economic development and improve people's welfare. In conclusion, unstable inflation will complicate business planning business activities, both in production and investment activities as well as in the pricing of goods and services produced.DOI: 10.15408/etk.v15i2.3260

  18. Soil Respiration in Semiarid Temperate Grasslands under Various Land Management.

    Directory of Open Access Journals (Sweden)

    Zhen Wang

    Full Text Available Soil respiration, a major component of the global carbon cycle, is significantly influenced by land management practices. Grasslands are potentially a major sink for carbon, but can also be a source. Here, we investigated the potential effect of land management (grazing, clipping, and ungrazed enclosures on soil respiration in the semiarid grassland of northern China. Our results showed the mean soil respiration was significantly higher under enclosures (2.17 μmol.m(-2.s(-1 and clipping (2.06 μmol.m(-2.s(-1 than under grazing (1.65 μmol.m-(2.s(-1 over the three growing seasons. The high rates of soil respiration under enclosure and clipping were associated with the higher belowground net primary productivity (BNPP. Our analyses indicated that soil respiration was primarily related to BNPP under grazing, to soil water content under clipping. Using structural equation models, we found that soil water content, aboveground net primary productivity (ANPP and BNPP regulated soil respiration, with soil water content as the predominant factor. Our findings highlight that management-induced changes in abiotic (soil temperature and soil water content and biotic (ANPP and BNPP factors regulate soil respiration in the semiarid temperate grassland of northern China.

  19. Soil Respiration in Semiarid Temperate Grasslands under Various Land Management.

    Science.gov (United States)

    Wang, Zhen; Ji, Lei; Hou, Xiangyang; Schellenberg, Michael P

    2016-01-01

    Soil respiration, a major component of the global carbon cycle, is significantly influenced by land management practices. Grasslands are potentially a major sink for carbon, but can also be a source. Here, we investigated the potential effect of land management (grazing, clipping, and ungrazed enclosures) on soil respiration in the semiarid grassland of northern China. Our results showed the mean soil respiration was significantly higher under enclosures (2.17 μmol.m(-2).s(-1)) and clipping (2.06 μmol.m(-2).s(-1)) than under grazing (1.65 μmol.m-(2).s(-1)) over the three growing seasons. The high rates of soil respiration under enclosure and clipping were associated with the higher belowground net primary productivity (BNPP). Our analyses indicated that soil respiration was primarily related to BNPP under grazing, to soil water content under clipping. Using structural equation models, we found that soil water content, aboveground net primary productivity (ANPP) and BNPP regulated soil respiration, with soil water content as the predominant factor. Our findings highlight that management-induced changes in abiotic (soil temperature and soil water content) and biotic (ANPP and BNPP) factors regulate soil respiration in the semiarid temperate grassland of northern China.

  20. Pore-scale investigation on the response of heterotrophic respiration to moisture conditions in heterogeneous soils

    Energy Technology Data Exchange (ETDEWEB)

    Yan, Zhifeng; Liu, Chongxuan; Todd-Brown, Katherine E.; Liu, Yuanyuan; Bond-Lamberty, Ben; Bailey, Vanessa L.

    2016-11-15

    The relationship between microbial respiration rate and soil moisture content is an important property for understanding and predicting soil organic carbon degradation, CO2 production and emission, and their subsequent effects on climate change. This paper reports a pore-scale modeling study to investigate the response of heterotrophic respiration to moisture conditions in soils and to evaluate various factors that affect this response. X-ray computed tomography was used to derive soil pore structures, which were then used for pore-scale model investigation. The pore-scale results were then averaged to calculate the effective respiration rates as a function of water content in soils. The calculated effective respiration rate first increases and then decreases with increasing soil water content, showing a maximum respiration rate at water saturation degree of 0.75 that is consistent with field and laboratory observations. The relationship between the respiration rate and moisture content is affected by various factors, including pore-scale organic carbon bioavailability, the rate of oxygen delivery, soil pore structure and physical heterogeneity, soil clay content, and microbial drought resistivity. Simulations also illustrates that a larger fraction of CO2 produced from microbial respiration can be accumulated inside soil cores under higher saturation conditions, implying that CO2 flux measured on the top of soil cores may underestimate or overestimate true soil respiration rates under dynamic moisture conditions. Overall, this study provides mechanistic insights into the soil respiration response to the change in moisture conditions, and reveals a complex relationship between heterotrophic microbial respiration rate and moisture content in soils that is affected by various hydrological, geochemical, and biophysical factors.

  1. Modeling Soil Organic Carbon Turnover in Four Temperate Forests Based on Radiocarbon Measurements of Heterotrophic Respiration and Soil Organic Carbon

    Science.gov (United States)

    Ahrens, B.; Borken, W.; Muhr, J.; Schrumpf, M.; Savage, K. E.; Wutzler, T.; Trumbore, S.; Reichstein, M.

    2011-12-01

    Soils of temperate forests store significant amounts of soil organic matter and are considered to be net sinks of atmospheric CO2. Soil organic carbon (SOC) dynamics have been studied using the Δ14C signature of bulk SOC or different SOC fractions as observational constraints in SOC models. Further, the Δ14C signature of CO2 evolved during the incubation of soil and roots has been widely used together with Δ14C of total soil respiration to partition soil respiration into heterotrophic respiration (Rh) and root respiration. However, these data have rarely been used together as observational constraints to determine SOC turnover times. Here, we present a multiple constraints approach, where we used SOC stock and its Δ14C signature, and heterotrophic respiration and its Δ14C signature to estimate SOC turnover times of a simple serial two-pool model via Bayesian optimization. We used data from four temperate forest ecosystems in Germany and the USA with different disturbance and management histories from selective logging to afforestation in the late 19th and early 20th century. The Δ14C signature of the atmosphere with its prominent bomb peak was used as a proxy for the Δ14C signature of aboveground and belowground litterfall. The Δ14C signature of litterfall was lagged behind the atmospheric signal to account for the period between photosynthetic fixation of carbon and its addition to SOC pools. We showed that the combined use of Δ14C measurements of Rh and SOC stocks helped to better constrain turnover times of the fast pool (primarily by Δ14C of Rh) and the slow pool (primarily by Δ14C of SOC). In particular, by introducing two additional parameters that describe the deviation from steady state of the fast and slow cycling pool for both SOC and SO14C, we were able to demonstrate that we cannot maintain the often used steady-state assumption of SOC models in general. Furthermore, a new transport version of our model, including SOC transport via

  2. Numerical modeling of dynamics of heart rate and arterial pressure during passive orthostatic test

    Science.gov (United States)

    Ishbulatov, Yu. M.; Kiselev, A. R.; Karavaev, A. S.

    2018-04-01

    A model of human cardiovascular system is proposed to describe the main heart rhythm, influence of autonomous regulation on frequency and strength of heart contractions and resistance of arterial vessels; process of formation of arterial pressure during systolic and diastolic phases; influence of respiration; synchronization between loops of autonomous regulation. The proposed model is used to simulate the dynamics of heart rate and arterial pressure during passive transition from supine to upright position. Results of mathematical modeling are compared to original experimental data.

  3. Diel hysteresis between soil respiration and soil temperature in a biological soil crust covered desert ecosystem.

    Science.gov (United States)

    Guan, Chao; Li, Xinrong; Zhang, Peng; Chen, Yongle

    2018-01-01

    Soil respiration induced by biological soil crusts (BSCs) is an important process in the carbon (C) cycle in arid and semi-arid ecosystems, where vascular plants are restricted by the harsh environment, particularly the limited soil moisture. However, the interaction between temperature and soil respiration remains uncertain because of the number of factors that control soil respiration, including temperature and soil moisture, especially in BSC-dominated areas. In this study, the soil respiration in moss-dominated crusts and lichen-dominated crusts was continuously measured using an automated soil respiration system over a one-year period from November 2015 to October 2016 in the Shapotou region of the Tengger Desert, northern China. The results indicated that over daily cycles, the half-hourly soil respiration rates in both types of BSC-covered areas were commonly related to the soil temperature. The observed diel hysteresis between the half-hourly soil respiration rates and soil temperature in the BSC-covered areas was limited by nonlinearity loops with semielliptical shapes, and soil temperature often peaked later than the half-hourly soil respiration rates in the BSC-covered areas. The average lag times between the half-hourly soil respiration rates and soil temperature for both types of BSC-covered areas were two hours over the diel cycles, and they were negatively and linearly related to the volumetric soil water content. Our results highlight the diel hysteresis phenomenon that occurs between soil respiration rates and soil temperatures in BSC-covered areas and the negative response of this phenomenon to soil moisture, which may influence total C budget evaluations. Therefore, the interactive effects of soil temperature and moisture on soil respiration in BSC-covered areas should be considered in global carbon cycle models of desert ecosystems.

  4. Dependence of Soil Respiration on Soil Temperature and Soil Moisture in Successional Forests in Southern China

    Institute of Scientific and Technical Information of China (English)

    Xu-Li Tang; Guo-Yi Zhou; Shu-Guang Liu; De-Qiang Zhang; Shi-Zhong Liu; Jiong Li; Cun-Yu Zhou

    2006-01-01

    The spatial and temporal variations in soil respiration and its relationship with biophysical factors in forests near the Tropic of Cancer remain highly uncertain. To contribute towards an improvement of actual estimates, soil respiration rates, soil temperature, and soil moisture were measured in three successional subtropical forests at the Dinghushan Nature Reserve (DNR) in southern China from March 2003 to February 2005. The overall objective of the present study was to analyze the temporal variations of soil respiration and its biophysical dependence in these forests. The relationships between biophysical factors and soil respiration rates were compared in successional forests to test the hypothesis that these forests responded similarly to biophysical factors. The seasonality of soil respiration coincided with the seasonal climate pattern, with high respiration rates in the hot humid season (April-September) and with low rates in the cool dry season (October-March). Soil respiration measured at these forests showed a clear increasing trend with the progressive succession. Annual mean (± SD) soil respiration rate in the DNR forests was (9.0±4.6) Mg CO2-C/hm2 per year, ranging from (6.1±3.2) Mg CO2-C/hm2 per year in early successional forests to (10.7±4.9) Mg CO2-C/hm2 per year in advanced successional forests. Soil respiration was correlated with both soil temperature and moisture. The T/M model, where the two biophysical variables are driving factors, accounted for 74%-82% of soil respiration variation in DNR forests. Temperature sensitivity decreased along progressive succession stages, suggesting that advanced-successional forests have a good ability to adjust to temperature. In contrast, moisture increased with progressive succession processes. This increase is caused, in part, by abundant respirators in advanced-successional forest, where more soil moisture is needed to maintain their activities.

  5. Dependence of soil respiration on soil temperature and soil moisture in successional forests in Southern China

    Science.gov (United States)

    Tang, X.-L.; Zhou, G.-Y.; Liu, S.-G.; Zhang, D.-Q.; Liu, S.-Z.; Li, Ji; Zhou, C.-Y.

    2006-01-01

    The spatial and temporal variations in soil respiration and its relationship with biophysical factors in forests near the Tropic of Cancer remain highly uncertain. To contribute towards an improvement of actual estimates, soil respiration rates, soil temperature, and soil moisture were measured in three successional subtropical forests at the Dinghushan Nature Reserve (DNR) in southern China from March 2003 to February 2005. The overall objective of the present study was to analyze the temporal variations of soil respiration and its biophysical dependence in these forests. The relationships between biophysical factors and soil respiration rates were compared in successional forests to test the hypothesis that these forests responded similarly to biophysical factors. The seasonality of soil respiration coincided with the seasonal climate pattern, with high respiration rates in the hot humid season (April-September) and with low rates in the cool dry season (October-March). Soil respiration measured at these forests showed a clear increasing trend with the progressive succession. Annual mean (±SD) soil respiration rate in the DNR forests was (9.0 ± 4.6) Mg CO2-C/hm2per year, ranging from (6.1 ± 3.2) Mg CO2-C/hm2per year in early successional forests to (10.7 ± 4.9) Mg CO2-C/hm2 per year in advanced successional forests. Soil respiration was correlated with both soil temperature and moisture. The T/M model, where the two biophysical variables are driving factors, accounted for 74%-82% of soil respiration variation in DNR forests. Temperature sensitivity decreased along progressive succession stages, suggesting that advanced-successional forests have a good ability to adjust to temperature. In contrast, moisture increased with progressive succession processes. This increase is caused, in part, by abundant respirators in advanced-successional forest, where more soil moisture is needed to maintain their activities.

  6. Low soil moisture during hot periods drives apparent negative temperature sensitivity of soil respiration in a dryland ecosystem: A multi-model comparison

    Science.gov (United States)

    Tucker, Colin; Reed, Sasha C.

    2016-01-01

    Arid and semiarid ecosystems (drylands) may dominate the trajectory of biosphere-to-atmosphere carbon (C) flux over the coming century. Accordingly, understanding dryland CO2 efflux controls is important for understanding C cycling at the global-scale: key unknowns regarding how temperature and moisture interact to regulate dryland C cycling remain. Further, the patchiness of dryland vegetation can create ‘islands of fertility’, with spatially heterogeneous rates of soil respiration (Rs). At our study site in southeastern Utah, USA we added or removed litter (0 to 650% of control) in paired plots that were either associated with a shrub or with interspaces between vascular plants. We measured Rs, soil temperature, and water content (θ) on eight sampling dates between October 2013 and November 2014. Rs was highest following monsoon rains in late summer when soil temperature was ~30°C. During mid-summer, Rs was low, associated with high soil temperatures (>40°C), resulting in an apparent negative temperature sensitivity of Rs at high temperatures, and positive temperature sensitivity at low-moderate temperatures. We used Bayesian statistical methods to compare multiple competing models capturing a wide range of hypothesized relationships between temperature, moisture, and Rs. The best fit model indicates apparent negative temperature sensitivity of soil respiration at high temperatures reflects the control of soil moisture – not high temperatures – in limiting Rs. The modeled Q10 ranged from 2.7 at 5°C to 1.4 at 45°C. Litter addition had no effect on temperature sensitivity or reference respiration (Rref = Rs at 20°C and optimum moisture) beneath shrubs, and little effect on Rref in interspaces, yet Rref was 1.5 times higher beneath shrubs than in interspaces. Together, these results suggest reduced Rs often observed at high temperatures in drylands is dominated by the control of moisture, and that variable litter inputs – at least over the short

  7. Shifts in mass-scaling of respiration, feeding, and growth rates across life-form transitions in marine pelagic organisms

    DEFF Research Database (Denmark)

    Kiørboe, Thomas; Hirst, Andrew G.

    2014-01-01

    The metabolic rate of organisms may be viewed as a basic property from which other vital rates and many ecological patterns emerge and that follows a universal allometric mass scaling law, or it may be considered a property of the organism that emerges as a result of the adaptation to the environ...... and be the result of the optimization of trade-offs that allow sufficient feeding and growth rates to balance mortality...

  8. [Effects of Tillage on Soil Respiration and Root Respiration Under Rain-Fed Summer Corn Field].

    Science.gov (United States)

    Lu, Xing-li; Liao, Yun-cheng

    2015-06-01

    To explore the effects of different tillage systems on soil respiration and root respiration under rain-fed condition. Based on a short-term experiment, this paper investigated soil respiration in summer corn growth season under four tillage treatments including subsoiling tillage (ST), no tillage (NT), rotary tillage (RT) and moldboard plow tillage (CT). The contribution of root respiration using root exclusion method was also discussed. The results showed that soil respiration rate presented a single peak trend under four tillage methods during the summer corn growing season, and the maximum value was recorded at the heading stage. The trends of soil respiration were as follows: heading stage > flowering stage > grain filling stage > maturity stage > jointing stage > seedling stage. The trends of soil respiration under different tillage systems were as follows: CT > ST > RT > NT. There was a significant correlation between soil respiration rate and soil temperatures (P soil respiration using exponential function equation. However, there was no significant correlation between soil respiration rate and soil moisture. Root respiration accounted for 45.13%-56.86% of the proportion of soil respiratio n with the mean value 51.72% during the summer corn growing season under different tillage systems. Therefore, root exclusion method could be used to study the contribution of crop growth to carbon emission, to compare effects of different tillage systems on the contribution of root respiration provides the bases for selecting the measures to slow down the decomposition of soil carbon.

  9. Growth response of Douglas-fir seedlings to nitrogen fertilization: importance of Rubisco activation state and respiration rates.

    Science.gov (United States)

    Daniel K. Manter; Kathleen L. Kavanagh; Cathy L. Rose

    2005-01-01

    High foliar nitrogen concentration ([N]) is associated with high rates of photosynthesis and thus high tree productivity; however, at excessive [N], tree productivity is reduced. Reports of excessive [N] in the Douglas-fir forests of the Oregon Coast Range prompted this investigation of growth and needle physiological responses to increasing foliar N concentrations in...

  10. Activity of the respiratory electron transport system and respiration rates within the oxygen minimum layer of the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A.; Shailaja, M.S.

    rates. The depth profiles representing observations off Peru and Mexico are also shown. It may be noted that the measurements off Mexico were made with a method similar to that followed by us (GARFIELD et al., 1983). On the other hand, the Peruvian... judging from the nitrate deficit, nitrite and nitrous oxide distributions (NAQvI and NORONHA, 1991). OXYGEN CONSUMPTION (nl./t/h) 0 q 20 40 60 80 , n i I i I00 Off Mexico • • /~ "f~ Off Peru o o / 200 ,o ~ ~ - o o I • " e o //-o-./ - - 400 tR~•7...

  11. [Research progress on photosynthesis regulating and controlling soil respiration].

    Science.gov (United States)

    Jing, Yan-Li; Guan, De-Xin; Wu, Jia-Bing; Wang, An-Zhi; Yuan, Feng-Hui

    2013-01-01

    To understand the mechanisms of soil respiration and accurately estimate its magnitude are the crucial basis of evaluating global carbon balance. However, the previously built soil respiration forecast models usually neglect the physiological processes that photosynthesis supplies substrates for rhizospheric respiration, leading to the defect in evaluating the mechanisms of soil respiration. This paper summarized the research progress on the mechanisms of photosynthetic regulation and control of soil respiration, introduced the related main research methods, and discussed the existing problems and research hotspots.

  12. Effect of Anoxia on Respiration Rate (Fermentative Index and Ethanol Production of Onion Bulbs (Allium cepa L.

    Directory of Open Access Journals (Sweden)

    N. Benkeblia

    2003-01-01

    Full Text Available The physiological behavior, including carbon dioxide production, fermentative index (FI and ethanolic production of onion bulbs kept under total anoxia (l00% N2 was investigated. During the first 24 hours, carbon dioxide production increased from 0.01 to 1.56 kPa Co2, and the average rate of the increase in CO2; production between 0 and 24 hours was 0.09 kPa/h. The Q10, of the fermentative index was l.9. Ethanol produced by onion bulbs kept under anoxia during 6 hours was temperature dependent, and was 0.563 and 0.760 pmol kg-1h-1 at 10 and 20°C respectively, while at 4°C the quantity produced was not detected. It is concluded that onion seems to be less tolerant to anoxia than other vegetables such as artichoke, cauliflower, tomato, potato and asparagus.

  13. Mechanistic model coupling gas exchange dynamics and Listeria monocytogenes growth in modified atmosphere packaging of non respiring food.

    Science.gov (United States)

    Chaix, E; Broyart, B; Couvert, O; Guillaume, C; Gontard, N; Guillard, V

    2015-10-01

    A mechanistic model coupling O2 and CO2 mass transfer (namely diffusion and solubilisation in the food itself and permeation through the packaging material) to microbial growth models was developed aiming at predicting the shelf life of modified atmosphere packaging (MAP) systems. It was experimentally validated on a non-respiring food by investigating concomitantly the O2/CO2 partial pressure in packaging headspace and the growth of Listeria monocytogenes (average microbial count) within the food sample. A sensitivity analysis has revealed that the reliability of the prediction by this "super-parametrized" model (no less than 47 parameters were required for running one simulation) was strongly dependent on the accuracy of the microbial input parameters. Once validated, this model was used to decipher the role of O2/CO2 mass transfer on microbial growth and as a MAP design tool: an example of MAP dimensioning was provided in this paper as a proof of concept. Copyright © 2015 Elsevier Ltd. All rights reserved.

  14. Slow and deep respiration suppresses steady-state sympathetic nerve activity in patients with chronic heart failure: from modeling to clinical application.

    Science.gov (United States)

    Harada, Daisuke; Asanoi, Hidetsugu; Takagawa, Junya; Ishise, Hisanari; Ueno, Hiroshi; Oda, Yoshitaka; Goso, Yukiko; Joho, Shuji; Inoue, Hiroshi

    2014-10-15

    Influences of slow and deep respiration on steady-state sympathetic nerve activity remain controversial in humans and could vary depending on disease conditions and basal sympathetic nerve activity. To elucidate the respiratory modulation of steady-state sympathetic nerve activity, we modeled the dynamic nature of the relationship between lung inflation and muscle sympathetic nerve activity (MSNA) in 11 heart failure patients with exaggerated sympathetic outflow at rest. An autoregressive exogenous input model was utilized to simulate entire responses of MSNA to variable respiratory patterns. In another 18 patients, we determined the influence of increasing tidal volume and slowing respiratory frequency on MSNA; 10 patients underwent a 15-min device-guided slow respiration and the remaining 8 had no respiratory modification. The model predicted that a 1-liter, step increase of lung volume decreased MSNA dynamically; its nadir (-33 ± 22%) occurred at 2.4 s; and steady-state decrease (-15 ± 5%), at 6 s. Actually, in patients with the device-guided slow and deep respiration, respiratory frequency effectively fell from 16.4 ± 3.9 to 6.7 ± 2.8/min (P state MSNA was decreased by 31% (P state MSNA. Thus slow and deep respiration suppresses steady-state sympathetic nerve activity in patients with high levels of resting sympathetic tone as in heart failure. Copyright © 2014 the American Physiological Society.

  15. Gaseous elemental mercury emissions and CO{sub 2} respiration rates in terrestrial soils under controlled aerobic and anaerobic laboratory conditions

    Energy Technology Data Exchange (ETDEWEB)

    Obrist, Daniel, E-mail: daniel.obrist@dri.edu [Desert Research Institute, Division of Atmospheric Sciences, 2215 Raggio Parkway, Reno, Nevada, 89512 (United States); Fain, Xavier; Berger, Carsen [Desert Research Institute, Division of Atmospheric Sciences, 2215 Raggio Parkway, Reno, Nevada, 89512 (United States)

    2010-03-01

    Mercury (Hg) levels in terrestrial soils are linked to the presence of organic carbon (C). Carbon pools are highly dynamic and subject to mineralization processes, but little is known about the fate of Hg during decomposition. This study evaluated relationships between gaseous Hg emissions from soils and carbon dioxide (CO{sub 2}) respiration under controlled laboratory conditions to assess potential losses of Hg to the atmosphere during C mineralization. Results showed a linear correlation (r{sup 2} = 0.49) between Hg and CO{sub 2} emissions in 41 soil samples, an effect unlikely to be caused by temperature, radiation, different Hg contents, or soil moisture. Stoichiometric comparisons of Hg/C ratios of emissions and underlying soil substrates suggest that 3% of soil Hg was subject to evasion. Even minute emissions of Hg upon mineralization, however, may be important on a global scale given the large Hg pools sequestered in terrestrial soils and C stocks. We induced changes in CO{sub 2} respiration rates and observed Hg flux responses, including inducement of anaerobic conditions by changing chamber air supply from N{sub 2}/O{sub 2} (80% and 20%, respectively) to pure N{sub 2}. Unexpectedly, Hg emissions almost quadrupled after O{sub 2} deprivation while oxidative mineralization (i.e., CO{sub 2} emissions) was greatly reduced. This Hg flux response to anaerobic conditions was lacking when repeated with sterilized soils, possibly due to involvement of microbial reduction of Hg{sup 2+} by anaerobes or indirect abiotic effects such as alterations in soil redox conditions. This study provides experimental evidence that Hg volatilization, and possibly Hg{sup 2+} reduction, is related to O{sub 2} availability in soils from two Sierra Nevada forests. If this result is confirmed in soils from other areas, the implication is that Hg volatilization from terrestrial soils is partially controlled by soil aeration and that low soil O{sub 2} levels and possibly low soil redox

  16. Management effects on European cropland respiration

    DEFF Research Database (Denmark)

    Eugster, Werner; Moffat, Antje M.; Ceschia, Eric

    2010-01-01

    Increases in respiration rates following management activities in croplands are considered a relevant anthropogenic source of CO2. In this paper, we quantify the impact of management events on cropland respiration fluxes of CO2 as they occur under current climate and management conditions. Our....... This allowed us to address the question of how management activities influence ecosystem respiration. This was done by comparing respiration fluxes during 7, 14, and 28 days after the management with those observed during the matching time period before management. Median increases in respiration ranged from...... than management alone are also important at a given site. Temperature is the climatic factor that showed best correlation with site-specific respiration fluxes. Therefore, the effect of temperature changes between the time periods before and after management were taken into account for a subset of 13...

  17. Cardiac, Skeletal, and smooth muscle mitochondrial respiration

    DEFF Research Database (Denmark)

    Park, Song-Young; Gifford, Jayson R; Andtbacka, Robert H I

    2014-01-01

    , skeletal, and smooth muscle was harvested from a total of 22 subjects (53±6 yrs) and mitochondrial respiration assessed in permeabilized fibers. Complex I+II, state 3 respiration, an index of oxidative phosphorylation capacity, fell progressively from cardiac, skeletal, to smooth muscle (54±1; 39±4; 15......±1 pmol•s(-1)•mg (-1), prespiration rates were normalized by CS (respiration...... per mitochondrial content), oxidative phosphorylation capacity was no longer different between the three muscle types. Interestingly, Complex I state 2 normalized for CS activity, an index of non-phosphorylating respiration per mitochondrial content, increased progressively from cardiac, skeletal...

  18. Respirator field performance factors

    International Nuclear Information System (INIS)

    Skaggs, B.J.; DeField, J.D.; Strandberg, S.W.; Sutcliffe, C.R.

    1985-01-01

    The Industrial Hygiene Group assisted OSHA and the NRC in measurements of respirator performance under field conditions. They reviewed problems associated with sampling aerosols within the respirator in order to determine fit factors (FFs) or field performance factor (FPF). In addition, they designed an environmental chamber study to determine the effects of temperature and humidity on a respirator wearer

  19. Respiration rates in subsurface waters of the northern Indian Ocean: Evidence for low decomposition rates of organic matter within the water column in the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A.; Shailaja, M.S.; DileepKumar, M.; Sengupta, R.

    measured in the Arabian Sea. Lower respiratin rates in the Bay of Bengal are corroborated by the much weaker north-south gradients in oxygen and total carbon dioxide. These are, however, in conflict with the higher sinking fluxes of organic carbon measured...

  20. Pantothenate kinase-associated neurodegeneration: altered mitochondria membrane potential and defective respiration in Pank2 knock-out mouse model.

    Science.gov (United States)

    Brunetti, Dario; Dusi, Sabrina; Morbin, Michela; Uggetti, Andrea; Moda, Fabio; D'Amato, Ilaria; Giordano, Carla; d'Amati, Giulia; Cozzi, Anna; Levi, Sonia; Hayflick, Susan; Tiranti, Valeria

    2012-12-15

    Neurodegeneration with brain iron accumulation (NBIA) comprises a group of neurodegenerative disorders characterized by high brain content of iron and presence of axonal spheroids. Mutations in the PANK2 gene, which encodes pantothenate kinase 2, underlie an autosomal recessive inborn error of coenzyme A metabolism, called pantothenate kinase-associated neurodegeneration (PKAN). PKAN is characterized by dystonia, dysarthria, rigidity and pigmentary retinal degeneration. The pathogenesis of this disorder is poorly understood and, although PANK2 is a mitochondrial protein, perturbations in mitochondrial bioenergetics have not been reported. A knock-out (KO) mouse model of PKAN exhibits retinal degeneration and azoospermia, but lacks any neurological phenotype. The absence of a clinical phenotype has partially been explained by the different cellular localization of the human and murine PANK2 proteins. Here we demonstrate that the mouse Pank2 protein localizes to mitochondria, similar to its human orthologue. Moreover, we show that Pank2-defective neurons derived from KO mice have an altered mitochondrial membrane potential, a defect further corroborated by the observations of swollen mitochondria at the ultra-structural level and by the presence of defective respiration.

  1. Diffusive flux in a model of stochastically gated oxygen transport in insect respiration

    Energy Technology Data Exchange (ETDEWEB)

    Berezhkovskii, Alexander M. [Mathematical and Statistical Computing Laboratory, Division of Computational Bioscience, Center for Information Technology, National Institutes of Health, Bethesda, Maryland 20892 (United States); Shvartsman, Stanislav Y. [Department of Chemical and Biological Engineering and Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544 (United States)

    2016-05-28

    Oxygen delivery to insect tissues is controlled by transport through a branched tubular network that is connected to the atmosphere by valve-like gates, known as spiracles. In certain physiological regimes, the spiracles appear to be randomly switching between open and closed states. Quantitative analysis of this regime leads a reaction-diffusion problem with stochastically switching boundary condition. We derive an expression for the diffusive flux at long times in this problem. Our approach starts with the derivation of the passage probability for a single particle that diffuses between a stochastically gated boundary, which models the opening and closing spiracle, and the perfectly absorbing boundary, which models oxygen absorption by the tissue. This passage probability is then used to derive an expression giving the diffusive flux as a function of the geometric parameters of the tube and characteristic time scales of diffusion and gate dynamics.

  2. A margin model to account for respiration-induced tumour motion and its variability

    International Nuclear Information System (INIS)

    Coolens, Catherine; Webb, Steve; Evans, Phil M; Shirato, H; Nishioka, K

    2008-01-01

    In order to reduce the sensitivity of radiotherapy treatments to organ motion, compensation methods are being investigated such as gating of treatment delivery, tracking of tumour position, 4D scanning and planning of the treatment, etc. An outstanding problem that would occur with all these methods is the assumption that breathing motion is reproducible throughout the planning and delivery process of treatment. This is obviously not a realistic assumption and is one that will introduce errors. A dynamic internal margin model (DIM) is presented that is designed to follow the tumour trajectory and account for the variability in respiratory motion. The model statistically describes the variation of the breathing cycle over time, i.e. the uncertainty in motion amplitude and phase reproducibility, in a polar coordinate system from which margins can be derived. This allows accounting for an additional gating window parameter for gated treatment delivery as well as minimizing the area of normal tissue irradiated. The model was illustrated with abdominal motion for a patient with liver cancer and tested with internal 3D lung tumour trajectories. The results confirm that the respiratory phases around exhale are most reproducible and have the smallest variation in motion amplitude and phase (approximately 2 mm). More importantly, the margin area covering normal tissue is significantly reduced by using trajectory-specific margins (as opposed to conventional margins) as the angular component is by far the largest contributor to the margin area. The statistical approach to margin calculation, in addition, offers the possibility for advanced online verification and updating of breathing variation as more data become available

  3. Acclimation and soil moisture constrain sugar maple root respiration in experimentally warmed soil.

    Science.gov (United States)

    Jarvi, Mickey P; Burton, Andrew J

    2013-09-01

    The response of root respiration to warmer soil can affect ecosystem carbon (C) allocation and the strength of positive feedbacks between climatic warming and soil CO2 efflux. This study sought to determine whether fine-root (maple (Acer saccharum Marsh.)-dominated northern hardwood forest would adjust to experimentally warmed soil, reducing C return to the atmosphere at the ecosystem scale to levels lower than that would be expected using an exponential temperature response function. Infrared heating lamps were used to warm the soil (+4 to +5 °C) in a mature sugar maple forest in a fully factorial design, including water additions used to offset the effects of warming-induced dry soil. Fine-root-specific respiration rates, root biomass, root nitrogen (N) concentration, soil temperature and soil moisture were measured from 2009 to 2011, with experimental treatments conducted from late 2010 to 2011. Partial acclimation of fine-root respiration to soil warming occurred, with soil moisture deficit further constraining specific respiration rates in heated plots. Fine-root biomass and N concentration remained unchanged. Over the 2011 growing season, ecosystem root respiration was not significantly greater in warmed soil. This result would not be predicted by models that allow respiration to increase exponentially with temperature and do not directly reduce root respiration in drier soil.

  4. Nutrients and temperature additively increase stream microbial respiration

    Science.gov (United States)

    David W. P. Manning; Amy D. Rosemond; Vladislav Gulis; Jonathan P. Benstead; John S. Kominoski

    2017-01-01

    Rising temperatures and nutrient enrichment are co‐occurring global‐change drivers that stimulate microbial respiration of detrital carbon, but nutrient effects on the temperature dependence of respiration in aquatic ecosystems remain uncertain. We measured respiration rates associated with leaf litter, wood, and fine benthic organic matter (FBOM) across...

  5. Quantifying soil respiration at landscape scales. Chapter 11

    Science.gov (United States)

    John B. Bradford; Michael G. Ryan

    2008-01-01

    Soil CO2, efflux, or soil respiration, represents a substantial component of carbon cycling in terrestrial ecosystems. Consequently, quantifying soil respiration over large areas and long time periods is an increasingly important goal. However, soil respiration rates vary dramatically in space and time in response to both environmental conditions...

  6. Vegetation types alter soil respiration and its temperature sensitivity at the field scale in an estuary wetland.

    Directory of Open Access Journals (Sweden)

    Guangxuan Han

    Full Text Available Vegetation type plays an important role in regulating the temporal and spatial variation of soil respiration. Therefore, vegetation patchiness may cause high uncertainties in the estimates of soil respiration for scaling field measurements to ecosystem level. Few studies provide insights regarding the influence of vegetation types on soil respiration and its temperature sensitivity in an estuary wetland. In order to enhance the understanding of this issue, we focused on the growing season and investigated how the soil respiration and its temperature sensitivity are affected by the different vegetation (Phragmites australis, Suaeda salsa and bare soil in the Yellow River Estuary. During the growing season, there were significant linear relationships between soil respiration rates and shoot and root biomass, respectively. On the diurnal timescale, daytime soil respiration was more dependent on net photosynthesis. A positive correlation between soil respiration and net photosynthesis at the Phragmites australis site was found. There were exponential correlations between soil respiration and soil temperature, and the fitted Q10 values varied among different vegetation types (1.81, 2.15 and 3.43 for Phragmites australis, Suaeda salsa and bare soil sites, respectively. During the growing season, the mean soil respiration was consistently higher at the Phragmites australis site (1.11 µmol CO2 m(-2 s(-1, followed by the Suaeda salsa site (0.77 µmol CO2 m(-2 s(-1 and the bare soil site (0.41 µmol CO2 m(-2 s(-1. The mean monthly soil respiration was positively correlated with shoot and root biomass, total C, and total N among the three vegetation patches. Our results suggest that vegetation patchiness at a field scale might have a large impact on ecosystem-scale soil respiration. Therefore, it is necessary to consider the differences in vegetation types when using models to evaluate soil respiration in an estuary wetland.

  7. Vegetation Types Alter Soil Respiration and Its Temperature Sensitivity at the Field Scale in an Estuary Wetland

    Science.gov (United States)

    Han, Guangxuan; Xing, Qinghui; Luo, Yiqi; Rafique, Rashad; Yu, Junbao; Mikle, Nate

    2014-01-01

    Vegetation type plays an important role in regulating the temporal and spatial variation of soil respiration. Therefore, vegetation patchiness may cause high uncertainties in the estimates of soil respiration for scaling field measurements to ecosystem level. Few studies provide insights regarding the influence of vegetation types on soil respiration and its temperature sensitivity in an estuary wetland. In order to enhance the understanding of this issue, we focused on the growing season and investigated how the soil respiration and its temperature sensitivity are affected by the different vegetation (Phragmites australis, Suaeda salsa and bare soil) in the Yellow River Estuary. During the growing season, there were significant linear relationships between soil respiration rates and shoot and root biomass, respectively. On the diurnal timescale, daytime soil respiration was more dependent on net photosynthesis. A positive correlation between soil respiration and net photosynthesis at the Phragmites australis site was found. There were exponential correlations between soil respiration and soil temperature, and the fitted Q 10 values varied among different vegetation types (1.81, 2.15 and 3.43 for Phragmites australis, Suaeda salsa and bare soil sites, respectively). During the growing season, the mean soil respiration was consistently higher at the Phragmites australis site (1.11 µmol CO2 m−2 s−1), followed by the Suaeda salsa site (0.77 µmol CO2 m−2 s−1) and the bare soil site (0.41 µmol CO2 m−2 s−1). The mean monthly soil respiration was positively correlated with shoot and root biomass, total C, and total N among the three vegetation patches. Our results suggest that vegetation patchiness at a field scale might have a large impact on ecosystem-scale soil respiration. Therefore, it is necessary to consider the differences in vegetation types when using models to evaluate soil respiration in an estuary wetland. PMID:24608636

  8. Stochastic interest rates model in compounding | Galadima ...

    African Journals Online (AJOL)

    Stochastic interest rates model in compounding. ... in finance, real estate, insurance, accounting and other areas of business administration. The assumption that future rates are fixed and known with certainty at the beginning of an investment, ...

  9. Respiration in spiders (Araneae).

    Science.gov (United States)

    Schmitz, Anke

    2016-05-01

    Spiders (Araneae) are unique regarding their respiratory system: they are the only animal group that breathe simultaneously with lungs and tracheae. Looking at the physiology of respiration the existence of tracheae plays an important role in spiders with a well-developed tracheal system. Other factors as sex, life time, type of prey capture and the high ability to gain energy anaerobically influence the resting and the active metabolic rate intensely. Most spiders have metabolic rates that are much lower than expected from body mass; but especially those with two pairs of lungs. Males normally have higher resting rates than females; spiders that are less evolved and possess a cribellum have lower metabolic rates than higher evolved species. Freely hunting spiders show a higher energy turnover than spiders hunting with a web. Spiders that live longer than 1 year will have lower metabolic rates than those species that die after 1 year in which development and reproduction must be completed. Lower temperatures and starvation, which most spiders can cope with, will decrease the metabolic rate as well.

  10. Kinetic experiments for evaluating the Nernst-Monod model for anode-respiring bacteria (ARB) in a biofilm anode.

    Science.gov (United States)

    Torres, César I; Marcus, Andrew Kato; Parameswaran, Prathap; Rittmann, Bruce E

    2008-09-01

    Anode-respiring bacteria (ARB) are able to transfer electrons from reduced substrates to a solid electrode. Previously, we developed a biofilm model based on the Nernst-Monod equation to describe the anode potential losses of ARB that transfer electrons through a solid conductive matrix. In this work, we develop an experimental setup to demonstrate how well the Nernst-Monod equation is able to represent anode potential losses in an ARB biofilm. We performed low-scan cyclic voltammetry (LSCV) throughout the growth phase of an ARB biofilm on a graphite electrode growing on acetate in continuous mode. The (j)V response of 9 LSCVs corresponded well to the Nernst-Monod equation, and the half-saturation potential (E(KA)) was -0.425 +/- 0.002 V vs Ag/AgCl at 30 degrees C (-0.155 +/- 0.002 V vs SHE). Anode-potential losses from the potential of acetate reached approximately 0.225 V at current density saturation, and this loss was determined by our microbial community's E(KA) value. The LSCVs at high current densities showed no significant deviation from the Nernst-Monod ideal shape, indicating that the conductivity of the biofilm matrix (kappa(bio)) was high enough (> or = 0.5 mS/cm) that potential loss did not affect the performance of the biofilm anode. Our results confirm the applicability of the Nernst-Monod equation for a conductive biofilm anode and give insights of the processes that dominate anode potential losses in microbial fuel cells.

  11. Measurements of soil respiration and simple models dependent on moisture and temperature for an Amazonian southwest tropical forest

    NARCIS (Netherlands)

    Zanchi, F.B.; Rocha, Da H.R.; Freitas, De H.C.; Kruijt, B.; Waterloo, M.J.; Manzi, A.O.

    2009-01-01

    Soil respiration plays a significant role in the carbon cycle of Amazonian tropical forests, although in situ measurements have only been poorly reported and the dependence of soil moisture and soil temperature also weakly understood. This work investigates the temporal variability of soil

  12. Maternal nutrient restriction in baboon programs later-life cellular growth and respiration of cultured skin fibroblasts: a potential model for the study of aging-programming interactions.

    Science.gov (United States)

    Salmon, Adam B; Dorigatti, Jonathan; Huber, Hillary F; Li, Cun; Nathanielsz, Peter W

    2018-05-25

    Compelling data exist for programming of chronic later-life diseases and longevity by perinatal developmental programming challenges. Understanding mechanisms by which life course health trajectory and longevity are set is fundamental to understanding aging. Appropriate approaches are needed to determine programming effects on cellular function. We have developed a baboon model in which control mothers eat ad libitum while a second group eat 70% of the global diet fed controls, leading to male and female offspring intrauterine growth restriction (IUGR). We have shown that IUGR suffer from acceleration of several age-related physiological declines. Here, we report on a skin-derived fibroblast model with potential relevance for mechanistic studies on how IUGR impacts aging. Fibroblasts were cultured from the skin biopsies taken from adult baboons from control and IUGR cohorts. IUGR-derived fibroblasts grew in culture less well than controls and those derived from male, but not female, IUGR baboons had a significant reduction in maximum respiration rate compared to control-derived fibroblasts. We also show that relative levels of several mitochondrial protein subunits, including NDUFB8 and cytochrome c oxidase subunit IV, were reduced in IUGR-derived fibroblasts even after serial passaging in culture. The lower levels of electron transport system components provide potential mechanisms for accelerated life course aging in the setting of programmed IUGR. This observation fits with the greater sensitivity of males compared with females to many, but not all, outcomes in response to programming challenges. These approaches will be powerful in the determination of programming-aging interactions.

  13. Modeling spatial patterns of soil respiration in maize fields from vegetation and soil property factors with the use of remote sensing and geographical information system.

    Directory of Open Access Journals (Sweden)

    Ni Huang

    Full Text Available To examine the method for estimating the spatial patterns of soil respiration (Rs in agricultural ecosystems using remote sensing and geographical information system (GIS, Rs rates were measured at 53 sites during the peak growing season of maize in three counties in North China. Through Pearson's correlation analysis, leaf area index (LAI, canopy chlorophyll content, aboveground biomass, soil organic carbon (SOC content, and soil total nitrogen content were selected as the factors that affected spatial variability in Rs during the peak growing season of maize. The use of a structural equation modeling approach revealed that only LAI and SOC content directly affected Rs. Meanwhile, other factors indirectly affected Rs through LAI and SOC content. When three greenness vegetation indices were extracted from an optical image of an environmental and disaster mitigation satellite in China, enhanced vegetation index (EVI showed the best correlation with LAI and was thus used as a proxy for LAI to estimate Rs at the regional scale. The spatial distribution of SOC content was obtained by extrapolating the SOC content at the plot scale based on the kriging interpolation method in GIS. When data were pooled for 38 plots, a first-order exponential analysis indicated that approximately 73% of the spatial variability in Rs during the peak growing season of maize can be explained by EVI and SOC content. Further test analysis based on independent data from 15 plots showed that the simple exponential model had acceptable accuracy in estimating the spatial patterns of Rs in maize fields on the basis of remotely sensed EVI and GIS-interpolated SOC content, with R2 of 0.69 and root-mean-square error of 0.51 µmol CO2 m(-2 s(-1. The conclusions from this study provide valuable information for estimates of Rs during the peak growing season of maize in three counties in North China.

  14. Modeling Spatial Patterns of Soil Respiration in Maize Fields from Vegetation and Soil Property Factors with the Use of Remote Sensing and Geographical Information System

    Science.gov (United States)

    Huang, Ni; Wang, Li; Guo, Yiqiang; Hao, Pengyu; Niu, Zheng

    2014-01-01

    To examine the method for estimating the spatial patterns of soil respiration (Rs) in agricultural ecosystems using remote sensing and geographical information system (GIS), Rs rates were measured at 53 sites during the peak growing season of maize in three counties in North China. Through Pearson's correlation analysis, leaf area index (LAI), canopy chlorophyll content, aboveground biomass, soil organic carbon (SOC) content, and soil total nitrogen content were selected as the factors that affected spatial variability in Rs during the peak growing season of maize. The use of a structural equation modeling approach revealed that only LAI and SOC content directly affected Rs. Meanwhile, other factors indirectly affected Rs through LAI and SOC content. When three greenness vegetation indices were extracted from an optical image of an environmental and disaster mitigation satellite in China, enhanced vegetation index (EVI) showed the best correlation with LAI and was thus used as a proxy for LAI to estimate Rs at the regional scale. The spatial distribution of SOC content was obtained by extrapolating the SOC content at the plot scale based on the kriging interpolation method in GIS. When data were pooled for 38 plots, a first-order exponential analysis indicated that approximately 73% of the spatial variability in Rs during the peak growing season of maize can be explained by EVI and SOC content. Further test analysis based on independent data from 15 plots showed that the simple exponential model had acceptable accuracy in estimating the spatial patterns of Rs in maize fields on the basis of remotely sensed EVI and GIS-interpolated SOC content, with R2 of 0.69 and root-mean-square error of 0.51 µmol CO2 m−2 s−1. The conclusions from this study provide valuable information for estimates of Rs during the peak growing season of maize in three counties in North China. PMID:25157827

  15. Estimation of fractional contribution of root respiration to a forest-floor CO2 flux using carbon isotopes

    International Nuclear Information System (INIS)

    Hachiya, Masashi; Moriizumi, Jun; Yamazawa, Hiromi

    2010-01-01

    Efflux of soil respired carbon dioxide(CO 2 ) is very important component for the global carbon cycle and dynamics of 14 C in environment, and to predict the global climate changes caused by increasing CO 2 concentrations in the atmosphere. There are two components that generate CO 2 in soil, soil organic matter decomposition and root respiration. Although the former is relatively well understood, the root-derived CO 2 efflux has not been evaluated sufficiently. The objective of our research is to estimate depth profile of the root respiration rate. Thus we developed a box model which calculates the depth profile. In this paper, we discussed about (1) the adequacy of calculated result by comparing it to the to observed soil respired CO 2 flux with trenching method and (2) sensitivity of the box model to uncertainty in the input data. The result showed that the depth profile of root respiration rate decreased with soil depth. This is attributed to the distribution of fine roots which dominate root respiration. The model results reasonable agreed with the measurement results and characteristics of root respiration. The output of the model was robust to the variation of the input data. (author)

  16. Model Uncertainty and Exchange Rate Forecasting

    NARCIS (Netherlands)

    Kouwenberg, R.; Markiewicz, A.; Verhoeks, R.; Zwinkels, R.C.J.

    2017-01-01

    Exchange rate models with uncertain and incomplete information predict that investors focus on a small set of fundamentals that changes frequently over time. We design a model selection rule that captures the current set of fundamentals that best predicts the exchange rate. Out-of-sample tests show

  17. Respiration Gates Sensory Input Responses in the Mitral Cell Layer of the Olfactory Bulb

    Science.gov (United States)

    Short, Shaina M.; Morse, Thomas M.; McTavish, Thomas S.; Shepherd, Gordon M.; Verhagen, Justus V.

    2016-01-01

    Respiration plays an essential role in odor processing. Even in the absence of odors, oscillating excitatory and inhibitory activity in the olfactory bulb synchronizes with respiration, commonly resulting in a burst of action potentials in mammalian mitral/tufted cells (MTCs) during the transition from inhalation to exhalation. This excitation is followed by inhibition that quiets MTC activity in both the glomerular and granule cell layers. Odor processing is hypothesized to be modulated by and may even rely on respiration-mediated activity, yet exactly how respiration influences sensory processing by MTCs is still not well understood. By using optogenetics to stimulate discrete sensory inputs in vivo, it was possible to temporally vary the stimulus to occur at unique phases of each respiration. Single unit recordings obtained from the mitral cell layer were used to map spatiotemporal patterns of glomerular evoked responses that were unique to stimulations occurring during periods of inhalation or exhalation. Sensory evoked activity in MTCs was gated to periods outside phasic respiratory mediated firing, causing net shifts in MTC activity across the cycle. In contrast, odor evoked inhibitory responses appear to be permitted throughout the respiratory cycle. Computational models were used to further explore mechanisms of inhibition that can be activated by respiratory activity and influence MTC responses. In silico results indicate that both periglomerular and granule cell inhibition can be activated by respiration to internally gate sensory responses in the olfactory bulb. Both the respiration rate and strength of lateral connectivity influenced inhibitory mechanisms that gate sensory evoked responses. PMID:28005923

  18. Soil respiration in northern forests exposed to elevated atmospheric carbon dioxide and ozone.

    Science.gov (United States)

    Pregitzer, Kurt; Loya, Wendy; Kubiske, Mark; Zak, Donald

    2006-06-01

    The aspen free-air CO2 and O3 enrichment (FACTS II-FACE) study in Rhinelander, Wisconsin, USA, is designed to understand the mechanisms by which young northern deciduous forest ecosystems respond to elevated atmospheric carbon dioxide (CO2) and elevated tropospheric ozone (O3) in a replicated, factorial, field experiment. Soil respiration is the second largest flux of carbon (C) in these ecosystems, and the objective of this study was to understand how soil respiration responded to the experimental treatments as these fast-growing stands of pure aspen and birch + aspen approached maximum leaf area. Rates of soil respiration were typically lowest in the elevated O3 treatment. Elevated CO2 significantly stimulated soil respiration (8-26%) compared to the control treatment in both community types over all three growing seasons. In years 6-7 of the experiment, the greatest rates of soil respiration occurred in the interaction treatment (CO2 + O3), and rates of soil respiration were 15-25% greater in this treatment than in the elevated CO2 treatment, depending on year and community type. Two of the treatments, elevated CO2 and elevated CO2 + O3, were fumigated with 13C-depleted CO2, and in these two treatments we used standard isotope mixing models to understand the proportions of new and old C in soil respiration. During the peak of the growing season, C fixed since the initiation of the experiment in 1998 (new C) accounted for 60-80% of total soil respiration. The isotope measurements independently confirmed that more new C was respired from the interaction treatment compared to the elevated CO2 treatment. A period of low soil moisture late in the 2003 growing season resulted in soil respiration with an isotopic signature 4-6 per thousand enriched in 13C compared to sample dates when the percentage soil moisture was higher. In 2004, an extended period of low soil moisture during August and early September, punctuated by a significant rainfall event, resulted in soil

  19. Determination of respirable-sized crystalline silica in different ambient environments in the United Kingdom with a mobile high flow rate sampler utilising porous foams to achieve the required particle size selection

    Science.gov (United States)

    Stacey, Peter; Thorpe, Andrew; Roberts, Paul; Butler, Owen

    2018-06-01

    Inhalation of respirable crystalline silica (RCS) can cause diseases including silicosis and cancer. Levels of RCS close to an emission source are measured but little is known about the wider ambient exposure from industry emissions or natural sources. The aim of this work is to report the RCS concentrations obtained from a variety of ambient environments using a new mobile respirable (PM4) sampler. A mobile battery powered high flow rate (52 L min-1) sampler was developed and evaluated for particulate aerosol sampling employing foams to select the respirable particle size fraction. Sampling was conducted in the United Kingdom at site boundaries surrounding seven urban construction and demolition and five sand quarry sites. These are compared with data from twelve urban aerosol samples and from repeat measurements from a base line study at a single rural site. The 50% particle size penetration (d50) through the foam was 4.3 μm. Over 85% of predict bias values were with ±10% of the respirable convention, which is based on a log normal curve. Results for RCS from all construction and quarry activities are generally low with a 95 th percentile of 11 μg m-3. Eighty percent of results were less than the health benchmark value of 3 μg m-3 used in some states in America for ambient concentrations. The power cutting of brick and the largest demolition activities gave the highest construction levels. Measured urban background RCS levels were typically below 0.3 μg m-3 and the median RCS level, at a rural background location, was 0.02 μg m-3. These reported ambient RCS concentrations may provide useful baseline values to assess the wider impact of fugitive, RCS containing, dust emissions into the wider environment.

  20. Modeling inflation rates and exchange rates in Ghana: application of multivariate GARCH models.

    Science.gov (United States)

    Nortey, Ezekiel Nn; Ngoh, Delali D; Doku-Amponsah, Kwabena; Ofori-Boateng, Kenneth

    2015-01-01

    This paper was aimed at investigating the volatility and conditional relationship among inflation rates, exchange rates and interest rates as well as to construct a model using multivariate GARCH DCC and BEKK models using Ghana data from January 1990 to December 2013. The study revealed that the cumulative depreciation of the cedi to the US dollar from 1990 to 2013 is 7,010.2% and the yearly weighted depreciation of the cedi to the US dollar for the period is 20.4%. There was evidence that, the fact that inflation rate was stable, does not mean that exchange rates and interest rates are expected to be stable. Rather, when the cedi performs well on the forex, inflation rates and interest rates react positively and become stable in the long run. The BEKK model is robust to modelling and forecasting volatility of inflation rates, exchange rates and interest rates. The DCC model is robust to model the conditional and unconditional correlation among inflation rates, exchange rates and interest rates. The BEKK model, which forecasted high exchange rate volatility for the year 2014, is very robust for modelling the exchange rates in Ghana. The mean equation of the DCC model is also robust to forecast inflation rates in Ghana.

  1. Choosing the right respirator

    International Nuclear Information System (INIS)

    Bidwell, J.

    1997-01-01

    Selecting respirators to help protect workers from airborne contaminants can be a confusing process. The consequences of selecting the incorrect respirator can be intimidating, and worker safety and health may be dramatically and irreparably affected if an inappropriate respirator is chosen. When used in the workplace, a formal respiratory protection program must be established covering the basic requirements outlined in the OSHA Respiratory Protection Standard (29 CFR 1910.134). Education and training must be properly emphasized and conducted periodically. Maintenance, cleaning, and storage programs must be established and routinely followed for reusable respirators. The process of establishing a respiratory protection program can be broken down into four basic steps: Identify respiratory hazards and concentrations; understand the contaminants effects on workers' health; select appropriate respiratory protection; and train in proper respirator use and maintenance. These four steps are the foundation for establishing a basic respirator protection program. Be sure to consult state and federal OSHA requirements to ensure that the program complies. Leading industrial respirator manufacturers should be able to assist with on-site training and education in this four-step process, in addition to helping employers train their workers and conduct respirator fit testing

  2. [Soil respiration characteristics in winter wheat field in North China Plain].

    Science.gov (United States)

    Chen, Shuyue; Li, Jun; Lu, Peiling; Wang, Yinghong; Yu, Qiang

    2004-09-01

    Experiments were conducted at the Yucheng Comprehensive Experimental Station of the Chinese Academy of Sciences during 2002-2003 to investigate the respiration of a pulverous sandstone soil under cultivation of winter wheat over a growth season. The effluent CO2 was collected and analyzed by the static-chamber/gas chromatography (GC) method at a frequency of once a week in spring and autumn, once two weeks in winter, twice a week for straw manure treatment, once a week for no straw manure treatment and nitrogen fertilization treatment in summer. The results indicated that diurnal variation of soil respiration rate showed a single peak in typical winter wheat farmlands in the North China Plain, and reached the highest at about 13 o'clock, and the lowest at about 4 o'clock in the early morning. In winter wheat growth season, the soil respiration rate was 31.23-606.85 mg x m(-2) x h(-1) under straw manure, 28.99-549.66 x m(-2) x h(-1) under no straw manure, 10.46-590.86 mg x m(-2) x h(-1) in N0, 16.11-349.88 mg x m(-2) x h(-1) in N100, 12.25-415.00 mg x m(-2) x h(-1) in N200, and 23.01-410.58 mg x m(-2) x h(-1) in N300, showing a similar seasonal variation tendency with soil temperature. Among all treatments, the straw manure had the most distinct soil respiration, though the soil respiration also increased slightly with increasing nitrogen fertilization. Soil respiration increased exponentially with increasing soil temperature, and the correlation of soil temperature at the depth of 5 cm was the best. This relationship was usually described with the Q10 model, which represented the sensitivity of soil respiration to temperature. Q10 was not a fixed value, which varied with the depth at which the temperature was measured and the depth of the active soil layer and soil temperature. At same time, the Q10 value decreased with increasing soil temperature. Soil water content was another important factor affecting soil respiration rate, but in this region, the relationship

  3. Significance of cold-season respiration and photosynthesis in a subarctic heath ecosystem in Northern Sweden

    DEFF Research Database (Denmark)

    Larsen, Klaus Steenberg; Ibrom, Andreas; Jonasson, S.

    2007-01-01

    While substantial cold-season respiration has been documented in most arctic and alpine ecosystems in recent years, the significance of cold-season photosynthesis in these biomes is still believed to be small. In a mesic, subartic heath during both the cold and warm season, we measured in situ...... ecosystem respiration and photosynthesis with a chamber technique at ambient conditions and at artificially, increased frequency of freeze-thaw (FT) cycles during fall and spring. We fitted the measured ecosystem exchange rates to respiration and photosynthesis models with R-2-values ranging from 0.81 to 0.......85. As expected, estimated cold-season (October, November, April and May) respiration was significant and accounted for at least 22% of the annual respiratory CO2 flux. More surprisingly, estimated photosynthesis during this period accounted for up to 19% of the annual gross CO2 uptake, suggesting that cold...

  4. Comparison of two lung clearance models based on the dissolution rates of oxidized depleted uranium

    International Nuclear Information System (INIS)

    Crist, K.C.

    1984-10-01

    An in-vitro dissolution study was conducted on two respirable oxidized depleted uranium samples. The dissolution rates generated from this study were then utilized in the International Commission on Radiological Protection Task Group lung clearance model and a lung clearance model proposed by Cuddihy. Predictions from both models based on the dissolution rates of the amount of oxidized depleted uranium that would be cleared to blood from the pulmonary region following an inhalation exposure were compared. It was found that the predictions made by both models differed considerably. The difference between the predictions was attributed to the differences in the way each model perceives the clearance from the pulmonary region. 33 references, 11 figures, 9 tables

  5. Comparison of two lung clearance models based on the dissolution rates of oxidized depleted uranium

    Energy Technology Data Exchange (ETDEWEB)

    Crist, K.C.

    1984-10-01

    An in-vitro dissolution study was conducted on two respirable oxidized depleted uranium samples. The dissolution rates generated from this study were then utilized in the International Commission on Radiological Protection Task Group lung clearance model and a lung clearance model proposed by Cuddihy. Predictions from both models based on the dissolution rates of the amount of oxidized depleted uranium that would be cleared to blood from the pulmonary region following an inhalation exposure were compared. It was found that the predictions made by both models differed considerably. The difference between the predictions was attributed to the differences in the way each model perceives the clearance from the pulmonary region. 33 references, 11 figures, 9 tables.

  6. Multistate cohort models with proportional transfer rates

    DEFF Research Database (Denmark)

    Schoen, Robert; Canudas-Romo, Vladimir

    2006-01-01

    of transfer rates. The two living state case and hierarchical multistate models with any number of living states are analyzed in detail. Applying our approach to 1997 U.S. fertility data, we find that observed rates of parity progression are roughly proportional over age. Our proportional transfer rate...... approach provides trajectories by parity state and facilitates analyses of the implications of changes in parity rate levels and patterns. More women complete childbearing at parity 2 than at any other parity, and parity 2 would be the modal parity in models with total fertility rates (TFRs) of 1.40 to 2......We present a new, broadly applicable approach to summarizing the behavior of a cohort as it moves through a variety of statuses (or states). The approach is based on the assumption that all rates of transfer maintain a constant ratio to one another over age. We present closed-form expressions...

  7. Modeling Real Exchange Rate Persistence in Chile

    Directory of Open Access Journals (Sweden)

    Leonardo Salazar

    2017-07-01

    Full Text Available The long and persistent swings in the real exchange rate have for a long time puzzled economists. Recent models built on imperfect knowledge economics seem to provide a theoretical explanation for this persistence. Empirical results, based on a cointegrated vector autoregressive (CVAR model, provide evidence of error-increasing behavior in prices and interest rates, which is consistent with the persistence observed in the data. The movements in the real exchange rate are compensated by movements in the interest rate spread, which restores the equilibrium in the product market when the real exchange rate moves away from its long-run benchmark value. Fluctuations in the copper price also explain the deviations of the real exchange rate from its long-run equilibrium value.

  8. Respiration in Aquatic Insects.

    Science.gov (United States)

    MacFarland, John

    1985-01-01

    This article: (1) explains the respiratory patterns of several freshwater insects; (2) describes the differences and mechanisms of spiracular cutaneous, and gill respiration; and (3) discusses behavioral aspects of selected aquatic insects. (ML)

  9. Affinity functions for modeling glass dissolution rates

    Energy Technology Data Exchange (ETDEWEB)

    Bourcier, W.L. [Lawrence Livermore National Lab., CA (United States)

    1997-07-01

    Glass dissolution rates decrease dramatically as glass approach ''saturation'' with respect to the leachate solution. Most repository sites are chosen where water fluxes are minimal, and therefore the waste glass is most likely to dissolve under conditions close to ''saturation''. The key term in the rate expression used to predict glass dissolution rates close to ''saturation'' is the affinity term, which accounts for saturation effects on dissolution rates. Interpretations of recent experimental data on the dissolution behaviour of silicate glasses and silicate minerals indicate the following: 1) simple affinity control does not explain the observed dissolution rate for silicate minerals or glasses; 2) dissolution rates can be significantly modified by dissolved cations even under conditions far from saturation where the affinity term is near unity; 3) the effects of dissolved species such as Al and Si on the dissolution rate vary with pH, temperature, and saturation state; and 4) as temperature is increased, the effect of both pH and temperature on glass and mineral dissolution rates decrease, which strongly suggests a switch in rate control from surface reaction-based to diffusion control. Borosilicate glass dissolution models need to be upgraded to account for these recent experimental observations. (A.C.)

  10. Decay rates of quarkonia and potential models

    International Nuclear Information System (INIS)

    Rai, Ajay Kumar; Pandya, J N; Vinodkumar, P C

    2005-01-01

    The decay rates of cc-bar and b-barb mesons have been studied with contributions from different correction terms. The corrections based on hard processes involved in the decays are quantitatively studied in the framework of different phenomenological potential models

  11. Estimate of respiration rate and physicochemical changes of fresh-cut apples stored under different temperatures Estimativa da taxa de respiração e das mudanças físico-químicas de maçãs minimamente processadas e estocadas sob diferentes temperaturas

    Directory of Open Access Journals (Sweden)

    Cristiane Fagundes

    2013-03-01

    Full Text Available In this study, the influence of storage temperature and passive modified packaging (PMP on the respiration rate and physicochemical properties of fresh-cut Gala apples (Malus domestica B. was investigated. The samples were packed in flexible multilayer bags and stored at 2 °C, 5 °C, and 7 °C for eleven days. Respiration rate as a function of CO2 and O2 concentrations was determined using gas chromatography. The inhibition parameters were estimated using a mathematical model based on Michaelis-Menten equation. The following physicochemical properties were evaluated: total soluble solids, pH, titratable acidity, and reducing sugars. At 2 °C, the maximum respiration rate was observed after 150 hours. At 5 °C and 7 °C the maximum respiration rates were observed after 100 and 50 hours of storage, respectively. The inhibition model results obtained showed a clear effect of CO2 on O2 consumption. The soluble solids decreased, although not significantly, during storage at the three temperatures studied. Reducing sugars and titratable acidity decreased during storage and the pH increased. These results indicate that the respiration rate influenced the physicochemical properties.Neste estudo, a influência da temperatura de armazenamento e da embalagem com atmosfera modificada passiva (AMP na taxa respiratória e nas propriedades físico-químicas de maçãs da variedade Gala (Malus domestica, B. minimamente processadas foi investigada. As amostras foram acondicionadas em embalagens flexíveis e armazenados a 2 °C, 5 °C e 7 °C, durante 11 dias. A taxa de respiração foi gerada para diferentes concentrações de O2 e CO2, obtidas por cromatografia gasosa. Os parâmetros de inibição foram estimados por um modelo matemático baseado na equação de Michaelis-Menten. Foram avaliadas as seguintes propriedades físico-químicas: sólidos solúveis totais, pH, acidez titulável e açúcares redutores. A 2 °C, a taxa de respiração máxima foi

  12. Leak rate models and leak detection

    International Nuclear Information System (INIS)

    1992-01-01

    Leak detection may be carried out by a number of detection systems, but selection of the systems must be carefully adapted to the fluid state and the location of the leak in the reactor coolant system. Computer programs for the calculation of leak rates contain different models to take into account the fluid state before its entrance into the crack, and they have to be verified by experiments; agreement between experiments and calculations is generally not satisfactory for very small leak rates resulting from narrow cracks or from a closing bending moment

  13. Cost-effectiveness analysis of N95 respirators and medical masks to protect healthcare workers in China from respiratory infections.

    Science.gov (United States)

    Mukerji, Shohini; MacIntyre, C Raina; Seale, Holly; Wang, Quanyi; Yang, Peng; Wang, Xiaoli; Newall, Anthony T

    2017-07-03

    There are substantial differences between the costs of medical masks and N95 respirators. Cost-effectiveness analysis is required to assist decision-makers evaluating alternative healthcare worker (HCW) mask/respirator strategies. This study aims to compare the cost-effectiveness of N95 respirators and medical masks for protecting HCWs in Beijing, China. We developed a cost-effectiveness analysis model utilising efficacy and resource use data from two cluster randomised clinical trials assessing various mask/respirator strategies conducted in HCWs in Level 2 and 3 Beijing hospitals for the 2008-09 and 2009-10 influenza seasons. The main outcome measure was the incremental cost-effectiveness ratio (ICER) per clinical respiratory illness (CRI) case prevented. We used a societal perspective which included intervention costs, the healthcare costs of CRI in HCWs and absenteeism costs. The incremental cost to prevent a CRI case with continuous use of N95 respirators when compared to medical masks ranged from US $490-$1230 (approx. 3000-7600 RMB). One-way sensitivity analysis indicated that the CRI attack rate and intervention effectiveness had the greatest impact on cost-effectiveness. The determination of cost-effectiveness for mask/respirator strategies will depend on the willingness to pay to prevent a CRI case in a HCW, which will vary between countries. In the case of a highly pathogenic pandemic, respirator use in HCWs would likely be a cost-effective intervention.

  14. Gaussian Mixture Model of Heart Rate Variability

    Science.gov (United States)

    Costa, Tommaso; Boccignone, Giuseppe; Ferraro, Mario

    2012-01-01

    Heart rate variability (HRV) is an important measure of sympathetic and parasympathetic functions of the autonomic nervous system and a key indicator of cardiovascular condition. This paper proposes a novel method to investigate HRV, namely by modelling it as a linear combination of Gaussians. Results show that three Gaussians are enough to describe the stationary statistics of heart variability and to provide a straightforward interpretation of the HRV power spectrum. Comparisons have been made also with synthetic data generated from different physiologically based models showing the plausibility of the Gaussian mixture parameters. PMID:22666386

  15. Predicting extinction rates in stochastic epidemic models

    International Nuclear Information System (INIS)

    Schwartz, Ira B; Billings, Lora; Dykman, Mark; Landsman, Alexandra

    2009-01-01

    We investigate the stochastic extinction processes in a class of epidemic models. Motivated by the process of natural disease extinction in epidemics, we examine the rate of extinction as a function of disease spread. We show that the effective entropic barrier for extinction in a susceptible–infected–susceptible epidemic model displays scaling with the distance to the bifurcation point, with an unusual critical exponent. We make a direct comparison between predictions and numerical simulations. We also consider the effect of non-Gaussian vaccine schedules, and show numerically how the extinction process may be enhanced when the vaccine schedules are Poisson distributed

  16. Modeling the Volatility of Exchange Rates: GARCH Models

    Directory of Open Access Journals (Sweden)

    Fahima Charef

    2017-03-01

    Full Text Available The modeling of the dynamics of the exchange rate at a long time remains a financial and economic research center. In our research we tried to study the relationship between the evolution of exchange rates and macroeconomic fundamentals. Our empirical study is based on a series of exchange rates for the Tunisian dinar against three currencies of major trading partners (dollar, euro, yen and fundamentals (the terms of trade, the inflation rate, the interest rate differential, of monthly data, from jan 2000 to dec-2014, for the case of the Tunisia. We have adopted models of conditional heteroscedasticity (ARCH, GARCH, EGARCH, TGARCH. The results indicate that there is a partial relationship between the evolution of the Tunisian dinar exchange rates and macroeconomic variables.

  17. Partitioning of ecosystem respiration in a beech forest

    DEFF Research Database (Denmark)

    Brændholt, Andreas; Ibrom, Andreas; Larsen, Klaus Steenberg

    2018-01-01

    Terrestrial ecosystem respiration (Reco) represents a major component of the global carbon cycle. It consists of many sub-components, such as aboveground plant respiration and belowground root and microbial respiration, each of which may respond differently to abiotic factors, and thus to global...... of Reco in a temperate beech forest at diel, seasonal and annual time scales. Reco was measured by eddy covariance while respiration rates from soil, tree stems and isolated coarse tree roots were measured bi-hourly by an automated closed-chamber system. Soil respiration (Rsoil) was measured in intact...... plots, and heterotrophic Rsoil was measured in trenched plots. Tree stem (Rstem) and coarse root (Rroot) respiration were measured by custom made closed-chambers. We found that the contribution of Rstem to total Reco varied across the year, by only accounting for 6% of Reco during winter and 16% during...

  18. Accelerating Net Terrestrial Carbon Uptake During the Warming Hiatus Due to Reduced Respiration

    Science.gov (United States)

    Ballantyne, Ashley; Smith, William; Anderegg, William; Kauppi, Pekka; Sarmiento, Jorge; Tans, Pieter; Shevliakova, Elena; Pan, Yude; Poulter, Benjamin; Anav, Alessandro; hide

    2017-01-01

    The recent warming hiatus presents an excellent opportunity to investigate climate sensitivity of carbon cycle processes. Here we combine satellite and atmospheric observations to show that the rate of net biome productivity (NBP) has significantly accelerated from - 0.007 +/- 0.065 PgC yr(exp -2) over the warming period (1982 to 1998) to 0.119 +/- 0.071 PgC yr(exp -2) over the warming hiatus (19982012). This acceleration in NBP is not due to increased primary productivity, but rather reduced respiration that is correlated (r = 0.58; P = 0.0007) and sensitive ( y = 4.05 to 9.40 PgC yr(exp -1) per C) to land temperatures. Global land models do not fully capture this apparent reduced respiration over the warming hiatus; however, an empirical model including soil temperature and moisture observations better captures the reduced respiration.

  19. Modelling of rate effects at multiple scales

    DEFF Research Database (Denmark)

    Pedersen, R.R.; Simone, A.; Sluys, L. J.

    2008-01-01

    , the length scale in the meso-model and the macro-model can be coupled. In this fashion, a bridging of length scales can be established. A computational analysis of  a Split Hopkinson bar test at medium and high impact load is carried out at macro-scale and meso-scale including information from  the micro-scale.......At the macro- and meso-scales a rate dependent constitutive model is used in which visco-elasticity is coupled to visco-plasticity and damage. A viscous length scale effect is introduced to control the size of the fracture process zone. By comparison of the widths of the fracture process zone...

  20. Death Rates in the Calorie Model

    Directory of Open Access Journals (Sweden)

    Martin Machay

    2016-01-01

    Full Text Available The Calorie model unifies the Classical demand and the supply in the food market. Hence, solves the major problem of Classical stationary state. It is, hence, formalization of the Classical theory of population. The model does not reflect the imperfections of reality mentioned by Malthus himself. It is the aim of this brief paper to relax some of the strong assumptions of the Calorie model to make it more realistic. As the results show the political economists were correct. The death resulting from malnutrition can occur way sooner than the stationary state itself. Moreover, progressive and retrograde movements can be easily described by the death rate derived in the paper. JEL Classification: J11, Q11, Q15, Q21, Y90.

  1. [Dynamic changes in soil respiration components and their regulating factors in the Moso bamboo plantation in subtropical China].

    Science.gov (United States)

    Yang, Wen-jia; Li, Yong-fu; Jiang, Pei-kun; Zhou, Guo-mo; Liu, Juan

    2015-10-01

    Dynamic changes (from April 2013 to March 2014) in soil respiration components were investigated by Li-8100 in the Moso bamboo plantation in Lin' an City, Zhejiang Province. Results showed that the average annual values for the soil total respiration rate, heterotrophic respiration rate, and autotrophic respiration rate in the Moso bamboo plantation were 2.93, 1.92 and 1.01 imol CO2 . m-2 . s-1, respectively. The soil respiration rate and its components exhibited strongly a seasonal dynamic pattern. The maximum appeared in July 2013, and the minimum appeared in January 2014. The annual cumulative CO2 emissions through soil respiration, heterotrophic respiration, and autotrophic respiration were 37.25, 24.61 and 12.64 t CO2 . hm-2 . a-1, respectively. The soil respiration and its components showed a close relation with soil temperature of 5 cm depth, and the corresponding Q10, values at 5 cm depth were 2.05, 1.95 and 2.34, respectively. Both the soil respiration and heterotrophic respiration were correlated to soil water soluble organic C (WSOC) content, but no significant relationship between autotrophic respiration and WSOC was observed. There were no significant relationships between soil respiration components and soil moisture content or microbial biomass C. The seasonal changes in soil respiration components in the Moso bamboo plantation were predominantly controlled by the soil temperature, and the soil WSOC content was an important environmental factor controlling total soil respiration and soil heterotrophic respiration.

  2. Plant Respiration and Climate Change Effects

    International Nuclear Information System (INIS)

    Bruhn, D.

    2002-04-01

    Plant respiration is one of the key processes in terms of an understanding of plant growth and functioning in a future climate. Short- and long-term effects of temperature and CO 2 on plant respiration were investigated in a number of plant species. The experiments tested effects of either temperature and/or CO 2 from the level of individual respiratory enzymes, isolated mitochondria, whole-tissue, and up to the whole canopy level. The short-term effects of elevated atmospheric CO 2 on plant respiration appeared to be less than suggested so far in the literature. This was true both at the tissue level and for intact mitochondria. Respiratory enzymes can, however, be affected already at low CO 2 . These effects did not manifest itself at the tissue level, though, due to low degrees of control on the whole respiratory process exerted by the particular enzymes. Plant respiration on the other hand was affected by long-term growth at elevated atmospheric CO 2 . The findings of the reduced plant respiration at the leaf level were consistent with the literature and potential causes are discussed. Short-term effects of temperature on plant respiration were demonstrated to be dependent on the actual measurement temperature. Further, it is shown that mitochondrial leaf respiration in darkness and light differ substantially in the temperature sensitivity with the former being the far most sensitive. This has implications for modelling CO 2 exchange between vegetation and atmosphere as demonstrated here, since this has so far been neglected. Long-term effects of temperature resulted in respiratory acclimation in a number of species. Respiratory acclimation appeared not to occur to any one single type of growth temperature. The implications of this finding in combination with the timing of acclimation are discussed for modelling respiratory CO 2 release. (au)

  3. Plant Respiration and Climate Change Effects

    Energy Technology Data Exchange (ETDEWEB)

    Bruhn, D

    2002-04-01

    Plant respiration is one of the key processes in terms of an understanding of plant growth and functioning in a future climate. Short- and long-term effects of temperature and CO{sub 2} on plant respiration were investigated in a number of plant species. The experiments tested effects of either temperature and/or CO{sub 2} from the level of individual respiratory enzymes, isolated mitochondria, whole-tissue, and up to the whole canopy level. The short-term effects of elevated atmospheric CO{sub 2} on plant respiration appeared to be less than suggested so far in the literature. This was true both at the tissue level and for intact mitochondria. Respiratory enzymes can, however, be affected already at low CO{sub 2}. These effects did not manifest itself at the tissue level, though, due to low degrees of control on the whole respiratory process exerted by the particular enzymes. Plant respiration on the other hand was affected by long-term growth at elevated atmospheric CO{sub 2}. The findings of the reduced plant respiration at the leaf level were consistent with the literature and potential causes are discussed. Short-term effects of temperature on plant respiration were demonstrated to be dependent on the actual measurement temperature. Further, it is shown that mitochondrial leaf respiration in darkness and light differ substantially in the temperature sensitivity with the former being the far most sensitive. This has implications for modelling CO{sub 2} exchange between vegetation and atmosphere as demonstrated here, since this has so far been neglected. Long-term effects of temperature resulted in respiratory acclimation in a number of species. Respiratory acclimation appeared not to occur to any one single type of growth temperature. The implications of this finding in combination with the timing of acclimation are discussed for modelling respiratory CO{sub 2} release. (au)

  4. Geochemical importance of isotopic fractionation during respiration

    International Nuclear Information System (INIS)

    Schleser, G.; Foerstel, H.

    1975-01-01

    In 1935 it was found that atmospheric oxygen contained a relatively greater abundance of the 18 O isotope than did the oxygen bound in water (Dole effect). A major contribution to the fractionation of the stable oxygen isotopes should result from the respiration of microorganisms. In this respect our interest centers on the soil because nearly all organic material produced on land is decomposed within the soil. The oceans are less important because the primary productivity on land is twice the value for the oceans. In a first approach we measured the oxygen isotope fractionation during the respiration of E. coli K12 for different respiration rates. These results, accomplished with a chemostat, indicate that the fractionation factor α of the oxygen isotopes increases with the increasing respiratory activity, measured as Q/sub O 2 /. At low dilution rates or growth rates respectively of about 0.05 h -1 , the fractionation factor amounts to 1.006 increasing to 1.017 at dilution rates of about 1.0 h -1 . The results are interpreted as a kinetic mass fractionation due to the slightly different diffusion coefficients of 16 O 2 and 18 O 16 O. The respiration rates in conjunction with the corresponding fractionation data are compared with the respiration rates of typical soil microorganisms such as Azotobacter, in order to deduce fractionation data for these organisms. This is necessary to calculate a mean global fractionation factor. Understanding the Dole effect with these fractionation processes should finally give us the opportunity to calculate gas-exchange rates between the atmosphere and the oceans, on the basis of the behavior of the stable oxygen isotopes

  5. [Effects of compaction on diurnal variaaton of soil respiration in Larix gmellini plantation in summer].

    Science.gov (United States)

    He, Na; Wang, Li-hai

    2010-12-01

    Taking the Larix gmellinii plantation in the experimental forest farm of Northeast Forestry University as test object, and by using Li-8100 automatic instrument, the daily CO2 emission rate of soil in summer under different degrees of man-made compaction was measured, with the regression models established. There were significant differences in the diurnal variation of soil respiration rate under different degrees of man-made compaction. In CK (no compaction), the maximum value of soil respiration appeared at 15:30-17:30, and the minimum value appeared at 03:30-05:30, which were obviously lagged behind those in compaction treatments. The maximum and minimum values of soil respiration rate in main roads appeared at 09:30-11:30 and 23:30-01:30, and those in branch roads appeared at 11:30 and 01:30-03:30, respectively. In all treatments, soil respiration rate had significant correlations with surface temperature, relative humidity, and the temperature at 10 cm soil depth, but the correlation with the soil moisture at 5 cm depth tended to be not significant when the compaction degree was increasing. Compaction altered surface soil physical structure, decreased surface soil CO2 release rate.

  6. Simplified pressure method for respirator fit testing.

    Science.gov (United States)

    Han, D; Xu, M; Foo, S; Pilacinski, W; Willeke, K

    1991-08-01

    A simplified pressure method has been developed for fit testing air-purifying respirators. In this method, the air-purifying cartridges are replaced by a pressure-sensing attachment and a valve. While wearers hold their breath, a small pump extracts air from the respirator cavity until a steady-state pressure is reached in 1 to 2 sec. The flow rate through the face seal leak is a unique function of this pressure, which is determined once for all respirators, regardless of the respirator's cavity volume or deformation because of pliability. The contaminant concentration inside the respirator depends on the degree of dilution by the flow through the cartridges. The cartridge flow varies among different brands and is measured once for each brand. The ratio of cartridge to leakflow is a measure of fit. This flow ratio has been measured on human subjects and has been compared to fit factors determined on the same subjects by means of photometric and particle count tests. The aerosol tests gave higher values of fit.

  7. Effects of long-term microgravitation exposure on cell respiration of the rat musculus soleus fibers.

    Science.gov (United States)

    Veselova, O M; Ogneva, I V; Larina, I M

    2011-07-01

    Cell respiration of the m. soleus fibers was studied in Wistar rats treated with succinic acid and exposed to microgravitation for 35 days. The results indicated that respiration rates during utilization of endogenous and exogenous substrates and the maximum respiration rate decreased in animals subjected to microgravitation without succinate treatment. The respiration rate during utilization of exogenous substrate did not increase in comparison with that on endogenous substrates. Succinic acid prevented the decrease in respiration rate on endogenous substrates and the maximum respiration rate. On the other hand, the respiration rate on exogenous substrates was reduced in vivarium control rats receiving succinate in comparison with intact control group. That could indicate changed efficiency of complex I of the respiratory chain due to reciprocal regulation of the tricarbonic acid cycle.

  8. Soil Respiration Declines Following Beetle - Induced Forest Mortality in a Lodgepole Pine Forest

    Science.gov (United States)

    Borkhuu, B.; Peckham, S. D.; Norton, U.; Ewers, B. E.; Pendall, E.

    2014-12-01

    Lodgepole pine (Pinus contorta var. latifolia) forests in northern Colorado and southeast Wyoming have been undergoing a major mortality event owing to mountain pine beetle (Dendroctonus ponderosae) infestation since 2007. We studied biotic and abiotic drivers of growing season soil respiration in four mature stands experiencing different levels of mortality between 2008 and 2012 in the Medicine Bow Mountains, southeastern Wyoming, USA. For five years, beetle infestation significantly altered forest structure. Stand mortality was 30% and more than 80% in stands with the lowest and highest mortality, respectively. Understory vegetation cover increased by 50% for five years following beetle infestation. Needlefall was increased by more than 50% during first two years of beetle infestation compared to the pre-disturbance period. We did not observe an immediate increase in soil respiration following beetle infestation as suggested by some researchers. Soil respiration rates in midsummer ranged from 1.4 ± 0.1 μmol m-2 s-1 in stands with highest mortality to 3.1 ± 0.2 μmol m-2s-1 in uninfested stand. Live tree basal area was the dominant factor controlling soil respiration, explaining more than 60% of the interannual and spatial variations in response to the disturbance. In addition, soil respiration was significantly correlated with fine root biomass, which explained 55% of variations, providing strong evidence that autotrophic respiration dominated the forest soil respiration flux. Furthermore, the seasonality of soil respiration was controlled mainly by mean monthly precipitation and mid-day photosynthetically active radiation. Each factor predicted from 30% to 50% of seasonal soil respiration variability with the highest correlation coefficients in stand with the lowest mortality. Our results clearly indicate that the reduction of photosynthesis in trees over the infestation period significantly reduced soil respiration. The remaining activity in dead stands may

  9. Annonaceae substitution rates: a codon model perspective

    Directory of Open Access Journals (Sweden)

    Lars Willem Chatrou

    2014-01-01

    Full Text Available The Annonaceae includes cultivated species of economic interest and represents an important source of information for better understanding the evolution of tropical rainforests. In phylogenetic analyses of DNA sequence data that are used to address evolutionary questions, it is imperative to use appropriate statistical models. Annonaceae are cases in point: Two sister clades, the subfamilies Annonoideae and Malmeoideae, contain the majority of Annonaceae species diversity. The Annonoideae generally show a greater degree of sequence divergence compared to the Malmeoideae, resulting in stark differences in branch lengths in phylogenetic trees. Uncertainty in how to interpret and analyse these differences has led to inconsistent results when estimating the ages of clades in Annonaceae using molecular dating techniques. We ask whether these differences may be attributed to inappropriate modelling assumptions in the phylogenetic analyses. Specifically, we test for (clade-specific differences in rates of non-synonymous and synonymous substitutions. A high ratio of nonsynonymous to synonymous substitutions may lead to similarity of DNA sequences due to convergence instead of common ancestry, and as a result confound phylogenetic analyses. We use a dataset of three chloroplast genes (rbcL, matK, ndhF for 129 species representative of the family. We find that differences in branch lengths between major clades are not attributable to different rates of non-synonymous and synonymous substitutions. The differences in evolutionary rate between the major clades of Annonaceae pose a challenge for current molecular dating techniques that should be seen as a warning for the interpretation of such results in other organisms.

  10. Respirators. Does your face fit

    Energy Technology Data Exchange (ETDEWEB)

    Caro, N M; Else, D

    1981-04-01

    The authors carried out a survey of face sizes of men and women of four different ethnic origins and carried out face-seal leakage trials on four corresponding test panels. No single respirator design is likely to fit all members of the workforce, and it may be necessary to stock respirators from more than one manufacturers.Three or four different respirators or size of respirator may be needed. However, the use of lossely-fitting respirators such as Airsteam helmets could remove the necessity for exhaustive fitting procedures.

  11. Unraveling net carbon exchange into its component processes of photosynthesis and respiration

    Science.gov (United States)

    Ballantyne, A.

    2017-12-01

    The recent `warming hiatus' presents an excellent opportunity to investigate climate sensitivity of carbon cycle processes. Herewe combine satellite and atmospheric observations to show that the rate of net biome productivity (NBP) has significantlyaccelerated from 0.007+/-0.065 PgC yr-2 over the warming period (1982 to 1998) to 0.119+/-0.071 PgC yr-2 over thewarminghiatus (1998-2012). This acceleration in NBP is not due to increased primary productivity, but rather reduced respiration thatis correlated (r2 0.58; P = 0.0007) and sensitive ( gamma= 4.05 to 9.40 PgC yr-1 per deg C) to land temperatures. Global landmodels do not fully capture this apparent reduced respiration over the warming hiatus; however, an empirical model includingsoil temperature and moisture observations seems to better captures the reduced respiration.

  12. Model Arrhenius untuk Pendugaan Laju Respirasi Brokoli Terolah Minimal

    Directory of Open Access Journals (Sweden)

    Nurul Imamah

    2016-04-01

    Full Text Available Minimally processed broccoli are perishable product because it still has some metabolism process during the storage period. One of the metabolism process is respiration. Respiration rate is varied depend on the commodity and storage temperature. The purpose of this research are: to review the respiration pattern of minimally processed broccoli during storage period, to study the effect of storage temperature to respiration rate, and to review the correlation between respiration rate and temperature based on Arrhenius model. Broccoli from farming organization “Agro Segar” was processed minimally and then measure the respiration rate. Closed system method is used to measure O2 and CO2 concentration. Minimally processed broccoli is stored at a temperature of 0oC, 5oC, 10oC and 15oC. The experimental design used was completely randomized design of the factors to analyze the rate of respiration. The result shows that broccoli is a climacteric vegetable. It is indicated by the increasing of O2 consumption and CO2 production during senescence phase. The respiration rate increase as high as the increasing of temperature storage. Models Arrhenius can describe correlation between respiration rate and temperature with R2 = 0.953-0.947. The constant value of activation energy (Eai and pre-exponential factor (Roi from Arrhenius model can be used to predict the respiration rate of minimally processed broccoli in every storage temperature

  13. Abnormal mitochondrial respiration in failed human myocardium.

    Science.gov (United States)

    Sharov, V G; Todor, A V; Silverman, N; Goldstein, S; Sabbah, H N

    2000-12-01

    Chronic heart failure (HF) is associated with morphologic abnormalities of cardiac mitochondria including hyperplasia, reduced organelle size and compromised structural integrity. In this study, we examined whether functional abnormalities of mitochondrial respiration are also present in myocardium of patients with advanced HF. Mitochondrial respiration was examined using a Clark electrode in an oxygraph cell containing saponin-skinned muscle bundles obtained from myocardium of failed explanted human hearts due to ischemic (ICM, n=9) or idiopathic dilated (IDC, n=9) cardiomyopathy. Myocardial specimens from five normal donor hearts served as controls (CON). Basal respiratory rate, respiratory rate after addition of the substrates glutamate and malate (V(SUB)), state 3 respiration (after addition of ADP, V(ADP)) and respiration after the addition of atractyloside (V(AT)) were measured in scar-free muscle bundles obtained from the subendocardial (ENDO) and subepicardial (EPI) thirds of the left ventricular (LV) free wall, interventricular septum and right ventricular (RV) free wall. There were no differences in basal and substrate-supported respiration between CON and HF regardless of etiology. V(ADP)was significantly depressed both in ICM and IDC compared to CON in all the regions studied. The respiratory control ratio, V(ADP)/V(AT), was also significantly decreased in HF compared to CON. In both ICM and IDC, V(ADP)was significantly lower in ENDO compared to EPI. The results indicate that mitochondrial respiration is abnormal in the failing human heart. The findings support the concept of low myocardial energy production in HF via oxidative phosphorylation, an abnormality with a potentially impact on global cardiac performance. Copyright 2000 Academic Press.

  14. [Temperature sensitivity of wheat plant respiration and soil respiration influenced by increased UV-B radiation from elongation to flowering periods].

    Science.gov (United States)

    Chen, Shu-Tao; Hu, Zheng-Hua; Li, Han-Mao; Ji, Yu-Hong; Yang, Yan-Ping

    2009-05-15

    Field experiment was carried out in the spring of 2008 in order to investigate the effects of increased UV-B radiation on the temperature sensitivity of wheat plant respiration and soil respiration from elongation to flowering periods. Static chamber-gas chromatography method was used to measure ecosystem respiration and soil respiration under 20% UV-B radiation increase and control. Environmental factors such as temperature and moisture were also measured. Results indicated that supplemental UV-B radiation inhibited the ecosystem respiration and soil respiration from wheat elongation to flowering periods, and the inhibition effect was more obvious for soil respiration than for ecosystem respiration. Ecosystem respiration rates, on daily average, were 9%, 9%, 3%, 16% and 30% higher for control than for UV-B treatment forthe five measurement days, while soil respiration rates were 99%, 93%, 106%, 38% and 10% higher for control than for UV-B treatment. The Q10s (temperature sensitivity coefficients) for plant respiration under control and UV-B treatments were 1.79 and 1.59, respectively, while the Q10s for soil respiration were 1.38 and 1.76, respectively. The Q10s for ecosystem respiration were 1.65 and 1.63 under CK and UV-B treatments, respectively. Supplemental UV-B radiation caused a lower Q10 for plant respiration and a higher Q10 for soil respiration, although no significant effect of supplemental UV-B radiation on the Q10 for ecosystem respiration was found.

  15. [Analysis of soil respiration and influence factors in wheat farmland under conservation tillage in southwest hilly region].

    Science.gov (United States)

    Zhang, Sai; Zhang, Xiao-Yu; Wang, Long-Chang; Luo, Hai-Xiu; Zhou, Hang-Fei; Ma, Zhong-Lian; Zhang, Cui-Wei

    2013-07-01

    In order to investigate the effect of conservation tillage on soil respiration in dry cropping farmland in southwest purple hilly region, the LI6400-09 respiratory chamber was adopted in the experiment conducted in the experimental field in Southwest University in Beibei, Chongqing. The respiration and the hydrothermal and biotic factors of soil were measured and analyzed during the growth period of wheat in the triple intercropping system of wheat/maize/soybean. There were four treatments including T (traditional tillage), R (ridge tillage), TS (traditional tillage + straw mulching) and RS (ridge tillage + straw mulching), which were all in triplicates. The results indicated that the soil respiration rate changed in the range of 1.100-2.508 micromol x (m2 x s)(-1) during the reproductive growth stage of wheat. There were significant differences in soil respiration rate among different treatments, which could be ranked as RS > R > TS > T. The soil temperature in the 10cm layer was ranked as T > R > TS > RS. The relationship between soil respiration and soil temperature fitted well with an exponential function, in which the Q10 values were 1.25, 1.20, 1.31 and 1.26, respectively. The soil moisture in the 5cm layer was ranked as TS > RS > T > R. The best fitting model between soil moisture and soil respiration was a parabolic curve, indicating the presence of soil moisture with the strongest soil respiration. The response threshold of wheat to soil moisture was 14.80%-17.47% during the reproductive stage. The dominant groups of soil animals were Collembola and Acarina, which were correlated with soil respiration to some extent. The correlation was high in the treatments T and R, ranged from 0.669-0.921, whereas there was no remarkable correlation in the other treatments.

  16. Temperature response of respiration across heterogeneous microtopography in the Arctic tundra, Utqiaġvik, Alaska

    Science.gov (United States)

    Wilkman, E.; Zona, D.; Tang, Y.; Gioli, B.; Lipson, D.; Oechel, W. C.

    2017-12-01

    The response of ecosystem respiration to warming in the Arctic is not well constrained, partly due to the presence of ice-wedge polygons in continuous permafrost areas. These formations lead to substantial variation in vegetation, soil moisture, water table, and active layer depth over the meter scale that can drive respiratory carbon loss. Accurate calculations of in-situ temperature sensitivities (Q10) are vital for the prediction of future Arctic emissions, and while the eddy covariance technique has commonly been used to determine the diurnal and season patterns of net ecosystem exchange (NEE) of CO2, the lack of suitable dark periods in the Arctic summer has limited our ability to estimate and interpret ecosystem respiration. To therefore improve our understanding of and define controls on ecosystem respiration, we directly compared CO2 fluxes measured from automated chambers across the main local polygonised landscape forms (high and low centers, polygon rims, and polygon troughs) to estimates from an adjacent eddy covariance tower. Low-centered polygons and polygon troughs had the greatest cumulative respiration rates, and ecosystem type appeared to be the most important explanatory variable for these rates. Despite the difference in absolute respiration rates, Q10 was surprisingly similar across all microtopographic features, despite contrasting water levels and vegetation types. Conversely, Q10 varied temporally, with higher values during the early and late summer and lower values during the peak growing season. Finally, good agreement was found between chamber and tower based Q10 estimates during the peak growing season. Overall, this study suggests that it is possible to simplify estimates of the temperature sensitivity of respiration across heterogeneous landscapes, but that seasonal changes in Q10 should be incorporated into current and future model simulations.

  17. Root Zone Respiration on Hydroponically Grown Wheat Plant Systems

    Science.gov (United States)

    Soler-Crespo, R. A.; Monje, O. A.

    2010-01-01

    Root respiration is a biological phenomenon that controls plant growth and physiological development during a plant's lifespan. This process is dependent on the availability of oxygen in the system where the plant is located. In hydroponic systems, where plants are submerged in a solution containing vital nutrients but no type of soil, the availability of oxygen arises from the dissolved oxygen concentration in the solution. This oxygen concentration is dependent on the , gas-liquid interface formed on the upper surface of the liquid, as given by Henry's Law, depending on pressure and temperature conditions. Respiration rates of the plants rise as biomass and root zone increase with age. The respiration rate of Apogee wheat plants (Triticum aestivum) was measured as a function of light intensity (catalytic for photosynthesis) and CO2 concentration to determine their effect on respiration rates. To determine their effects on respiration rate and plant growth microbial communities were introduced into the system, by Innoculum. Surfactants were introduced, simulating gray-water usage in space, as another factor to determine their effect on chemical oxygen demand of microbials and on respiration rates of the plants. It is expected to see small effects from changes in CO2 concentration or light levels, and to see root respiration decrease in an exponential manner with plant age and microbial activity.

  18. The protozoan, Paramecium primaurelia, as a non-sentient model to test laser light irradiation: The effects of an 808nm infrared laser diode on cellular respiration.

    Science.gov (United States)

    Amaroli, Andrea; Ravera, Silvia; Parker, Steven; Panfoli, Isabella; Benedicenti, Alberico; Benedicenti, Stefano

    2015-07-01

    Photobiomodulation (PBM) has been used in clinical practice for more than 40 years. Unfortunately, conflicting literature has led to the labelling of PBM as a complementary or alternative medicine approach. However, past and ongoing clinical and research studies by reputable investigators have re-established the merits of PBM as a genuine medical therapy, and the technique has, in the last decade, seen an exponential increase in the numbers of clinical instruments available, and their applications. This resurgence has led to a clear need for appropriate experimental models to test the burgeoning laser technology being developed for medical applications. In this context, an ethical model that employs the protozoan, Paramecium primaurelia, is proposed. We studied the possibility of using the measure of oxygen consumption to test PBM by irradiation with an infrared or near-infrared laser. The results show that an 808nm infrared laser diode (1W; 64J/cm²) affects cellular respiration in P. primaurelia, inducing, in the irradiated cells, a significantly (p Paramecium can be an excellent tool in biological assays involving infrared and near-infrared PBM, as it combines the advantages of in vivo results with the practicality of in vitro testing. This test represents a fast, inexpensive and straightforward assay, which offers an alternative to both traditional in vivo testing and more expensive mammalian cellular cultures. 2015 FRAME.

  19. Respirable dust and respirable silica exposure in Ontario gold mines.

    Science.gov (United States)

    Verma, Dave K; Rajhans, Gyan S; Malik, Om P; des Tombe, Karen

    2014-01-01

    A comprehensive survey of respirable dust and respirable silica in Ontario gold mines was conducted by the Ontario Ministry of Labor during 1978-1979. The aim was to assess the feasibility of introducing gravimetric sampling to replace the assessment method which used konimeters, a device which gave results in terms of number of particles per cubic centimeter (ppcc) of air. The study involved both laboratory and field assessments. The field assessment involved measurement of airborne respirable dust and respirable silica at all eight operating gold mines of the time. This article describes the details of the field assessment. A total of 288 long-term (7-8 hr) personal respirable dust air samples were collected from seven occupational categories in eight gold mines. The respirable silica (α-quartz) was determined by x-ray diffraction method. The results show that during 1978-1979, the industry wide mean respirable dust was about 1 mg/m(3), and the mean respirable silica was 0.08 mg/m(3.)The mean% silica in respirable dust was 7.5%. The data set would be useful in future epidemiological and health studies, as well as in assessment of workers' compensation claims for occupational diseases such as silicosis, chronic obstructive pulmonary disease (COPD), and autoimmune diseases such as renal disease and rheumatoid arthritis.

  20. Oxygen dependence of respiration in rat spinotrapezius muscle in situ

    Science.gov (United States)

    Pittman, Roland N.

    2012-01-01

    The oxygen dependence of respiration in striated muscle in situ was studied by measuring the rate of decrease of interstitial Po2 [oxygen disappearance curve (ODC)] following rapid arrest of blood flow by pneumatic tissue compression, which ejected red blood cells from the muscle vessels and made the ODC independent from oxygen bound to hemoglobin. After the contribution of photo-consumption of oxygen by the method was evaluated and accounted for, the corrected ODCs were converted into the Po2 dependence of oxygen consumption, V̇o2, proportional to the rate of Po2 decrease. Fitting equations obtained from a model of heterogeneous intracellular Po2 were applied to recover the parameters describing respiration in muscle fibers, with a predicted sigmoidal shape for the dependence of V̇o2 on Po2. This curve consists of two regions connected by the point for critical Po2 of the cell (i.e., Po2 at the sarcolemma when the center of the cell becomes anoxic). The critical Po2 was below the Po2 for half-maximal respiratory rate (P50) for the cells. In six muscles at rest, the rate of oxygen consumption was 139 ± 6 nl O2/cm3·s and mitochondrial P50 was k = 10.5 ± 0.8 mmHg. The range of Po2 values inside the muscle fibers was found to be 4–5 mmHg at the critical Po2. The oxygen dependence of respiration can be studied in thin muscles under different experimental conditions. In resting muscle, the critical Po2 was substantially lower than the interstitial Po2 of 53 ± 2 mmHg, a finding that indicates that V̇o2 under this circumstance is independent of oxygen supply and is discordant with the conventional hypothesis of metabolic regulation of the oxygen supply to tissue. PMID:22523254

  1. Combination of On-line pH and Oxygen Transfer Rate Measurement in Shake Flasks by Fiber Optical Technique and Respiration Activity MOnitoring System (RAMOS

    Directory of Open Access Journals (Sweden)

    Jochen Büchs

    2007-12-01

    Full Text Available Shake flasks are commonly used for process development in biotechnologyindustry. For this purpose a lot of information is required from the growth conditions duringthe fermentation experiments. Therefore, Anderlei et al. developed the RAMOS technology[1, 2], which proviedes on-line oxygen and carbondioxide transfer rates in shake flasks.Besides oxygen consumption, the pH in the medium also plays an important role for thesuccessful cultivation of micro-organisms and for process development. For online pHmeasurement fiber optical methods based on fluorophores are available. Here a combinationof the on-line Oxygen Transfer Rate (OTR measurements in the RAMOS device with anon-line, fiber optical pH measurement is presented. To demonstrate the application of thecombined measurement techniques, Escherichia coli cultivations were performed and on-line pH measurements were compared with off-line samples. The combination of on-lineOTR and pH measurements gives a lot of information about the cultivation and, therefore, itis a powerful technique for monitoring shake flask experiments as well as for processdevelopment.

  2. respiration and transpiration characteristics of selected fresh fruits

    African Journals Online (AJOL)

    AISA

    were higher in optimal atmospheres. The Q10 values ... High respiration rates increase tissue aging and decrease the ability of the product to repel ... Two types of containers were used for the ..... availability of oxygen around the product also.

  3. Modeling Equity for Alternative Water Rate Structures

    Science.gov (United States)

    Griffin, R.; Mjelde, J.

    2011-12-01

    The rising popularity of increasing block rates for urban water runs counter to mainstream economic recommendations, yet decision makers in rate design forums are attracted to the notion of higher prices for larger users. Among economists, it is widely appreciated that uniform rates have stronger efficiency properties than increasing block rates, especially when volumetric prices incorporate intrinsic water value. Yet, except for regions where water market purchases have forced urban authorities to include water value in water rates, economic arguments have weakly penetrated policy. In this presentation, recent evidence will be reviewed regarding long term trends in urban rate structures while observing economic principles pertaining to these choices. The main objective is to investigate the equity of increasing block rates as contrasted to uniform rates for a representative city. Using data from four Texas cities, household water demand is established as a function of marginal price, income, weather, number of residents, and property characteristics. Two alternative rate proposals are designed on the basis of recent experiences for both water and wastewater rates. After specifying a reasonable number (~200) of diverse households populating the city and parameterizing each household's characteristics, every household's consumption selections are simulated for twelve months. This procedure is repeated for both rate systems. Monthly water and wastewater bills are also computed for each household. Most importantly, while balancing the budget of the city utility we compute the effect of switching rate structures on the welfares of households of differing types. Some of the empirical findings are as follows. Under conditions of absent water scarcity, households of opposing characters such as low versus high income do not have strong preferences regarding rate structure selection. This changes as water scarcity rises and as water's opportunity costs are allowed to

  4. Changes in photosynthesis and soil moisture drive the seasonal soil respiration-temperature hysteresis relationship

    Science.gov (United States)

    Quan Zhang; Richard P. Phillips; Stefano Manzoni; Russell L. Scott; A. Christopher Oishi; Adrien Finzi; Edoardo Daly; Rodrigo Vargas; Kimberly A. Novick

    2018-01-01

    In nearly all large-scale terrestrial ecosystem models, soil respiration is represented as a function of soil temperature. However, the relationship between soil respiration and soil temperature is highly variable across sites and there is often a pronounced hysteresis in the soil respiration-temperature relationship over the course of the growing season. This...

  5. Model Uncertainty and Exchange Rate Forecasting

    NARCIS (Netherlands)

    R.R.P. Kouwenberg (Roy); A. Markiewicz (Agnieszka); R. Verhoeks (Ralph); R.C.J. Zwinkels (Remco)

    2013-01-01

    textabstractWe propose a theoretical framework of exchange rate behavior where investors focus on a subset of economic fundamentals. We find that any adjustment in the set of predictors used by investors leads to changes in the relation between the exchange rate and fundamentals. We test the

  6. Temperature response of soil respiration largely unaltered with experimental warming

    Science.gov (United States)

    Carey, Joanna C.; Tang, Jianwu; Templer, Pamela H.; Kroeger, Kevin D.; Crowther, Thomas W.; Burton, Andrew J.; Dukes, Jeffrey S.; Emmett, Bridget; Frey, Serita D.; Heskel, Mary A.; Jiang, Lifen; Machmuller, Megan B.; Mohan, Jacqueline; Panetta, Anne Marie; Reich, Peter B.; Reinsch, Sabine; Wang, Xin; Allison, Steven D.; Bamminger, Chris; Bridgham, Scott; Collins, Scott L.; de Dato, Giovanbattista; Eddy, William C.; Enquist, Brian J.; Estiarte, Marc; Harte, John; Henderson, Amanda; Johnson, Bart R.; Steenberg Larsen, Klaus; Luo, Yiqi; Marhan, Sven; Melillo, Jerry M.; Penuelas, Josep; Pfeifer-Meister, Laurel; Poll, Christian; Rastetter, Edward B.; Reinmann, Andrew B.; Reynolds, Lorien L.; Schmidt, Inger K.; Shaver, Gaius R.; Strong, Aaron L.; Suseela, Vidya; Tietema, Albert

    2016-01-01

    The respiratory release of carbon dioxide (CO2) from soil is a major yet poorly understood flux in the global carbon cycle. Climatic warming is hypothesized to increase rates of soil respiration, potentially fueling further increases in global temperatures. However, despite considerable scientific attention in recent decades, the overall response of soil respiration to anticipated climatic warming remains unclear. We synthesize the largest global dataset to date of soil respiration, moisture, and temperature measurements, totaling >3,800 observations representing 27 temperature manipulation studies, spanning nine biomes and over 2 decades of warming. Our analysis reveals no significant differences in the temperature sensitivity of soil respiration between control and warmed plots in all biomes, with the exception of deserts and boreal forests. Thus, our data provide limited evidence of acclimation of soil respiration to experimental warming in several major biome types, contrary to the results from multiple single-site studies. Moreover, across all nondesert biomes, respiration rates with and without experimental warming follow a Gaussian response, increasing with soil temperature up to a threshold of ∼25 °C, above which respiration rates decrease with further increases in temperature. This consistent decrease in temperature sensitivity at higher temperatures demonstrates that rising global temperatures may result in regionally variable responses in soil respiration, with colder climates being considerably more responsive to increased ambient temperatures compared with warmer regions. Our analysis adds a unique cross-biome perspective on the temperature response of soil respiration, information critical to improving our mechanistic understanding of how soil carbon dynamics change with climatic warming.

  7. Soil warming increases metabolic quotients of soil microorganisms without changes in temperature sensitivity of soil respiration

    Science.gov (United States)

    Marañón-Jiménez, Sara; Soong, Jenniffer L.; Leblans, Niki I. W.; Sigurdsson, Bjarni D.; Dauwe, Steven; Fransen, Erik; Janssens, Ivan A.

    2017-04-01

    Increasing temperatures can accelerate soil organic matter (SOM) decomposition and release large amounts of CO2 to the atmosphere, potentially inducing climate change feedbacks. Alterations to the temperature sensitivity and metabolic pathways of soil microorganisms in response to soil warming can play a key role in these soil carbon (C) losses. Here, we present results of an incubation experiment using soils from a geothermal gradient in Iceland that have been subjected to different intensities of soil warming (+0, +1, +3, +5, +10 and +20 °C above ambient) over seven years. We hypothesized that 7 years of soil warming would led to a depletion of labile organic substrates, with a subsequent decrease of the "apparent" temperature sensitivity of soil respiration. Associated to this C limitation and more sub-optimal conditions for microbial growth, we also hypothesized increased microbial metabolic quotients (soil respiration per unit of microbial biomass), which is associated with increases in the relative amount of C invested into catabolic pathways along the warming gradient. Soil respiration and basal respiration rates decreased with soil warming intensity, in parallel with a decline in soil C availability. Contrasting to our first hypothesis, we did not detect changes in the temperature sensitivity of soil respiration with soil warming or on the availability of nutrients and of labile C substrates at the time of incubation. However, in agreement to our second hypothesis, microbial metabolic quotients (soil respiration per unit of microbial biomass) increased at warmer temperatures, while the C retained in biomass decreased as substrate became limiting. Long-term (7 years) temperature increases thus triggered a change in the metabolic functioning of the soil microbial communities towards increasing energy costs for maintenance or resource acquisition, thereby lowering the capacity of C retention and stabilization of warmed soils. These results highlight the need

  8. Soil respiration, microbial biomass and exoenzyme activity in switchgrass stands under nitrogen fertilization management and climate warming.

    Science.gov (United States)

    Jian, S.; Li, J.; de Koff, J.; Celada, S.; Mayes, M. A.; Wang, G.; Guo, C.

    2016-12-01

    Switchgrass (Panicum virgatum L.), as a model bioenergy crop, received nitrogen fertilizers for increasing its biomass yields. Studies rarely investigate the interactive effects of nitrogen fertilization and climate warming on soil microbial activity and carbon cycling in switchgrass cropping systems. Enhanced nitrogen availability under fertilization can alter rates of soil organic matter decomposition and soil carbon emissions to the atmosphere and thus have an effect on climate change. Here, we assess soil CO2 emission, microbial biomass and exoenzyme activities in two switchgrass stands with no fertilizer and 60 lbs N / acre. Soils were incubated at 15 ºC and 20 ºC for 180-day. Dry switchgrass plant materials were added to incubation jars and the 13C stable isotopic probing technique was used to monitor soil CO2 respiration derived from relatively labile litter and indigenous soil. Measurements of respiration, δ13C of respiration, microbial biomass carbon and exoenzyme activity were performed on days 1, 5, 10, 15, 30, 60, 90, 120, 150 and 180. Soil respiration rate was greater in the samples incubated at 20 ºC as compared to those incubated at 15 ºC. Exoenzyme activities were significantly altered by warming, litter addition and nitrogen fertilization. There was a significant interactive effect of nitrogen fertilization and warming on the proportion of CO2 respired from soils such that nitrogen fertilization enhanced warming-induced increase by 12.0% (Pmineralization. Fertilization increased soil microbial biomass carbon at both temperatures (9.0% at 15 ºC and 14.5% at 20 ºC). Our preliminary analysis suggested that warming effects on enhanced soil respiration can be further increased with elevated fertilizer input via greater microbial biomass and exoenzyme activity. In addition to greater biomass yield under N fertilization, this study informs potential soil carbon loss from stimulated soil respiration under nitrogen fertilization and warming in

  9. A MEMS turbine prototype for respiration harvesting

    Science.gov (United States)

    Goreke, U.; Habibiabad, S.; Azgin, K.; Beyaz, M. I.

    2015-12-01

    The design, manufacturing, and performance characterization of a MEMS-scale turbine prototype is reported. The turbine is designed for integration into a respiration harvester that can convert normal human breathing into electrical power through electromagnetic induction. The device measures 10 mm in radius, and employs 12 blades located around the turbine periphery along with ball bearings around the center. Finite element simulations showed that an average torque of 3.07 μNm is induced at 12 lpm airflow rate, which lies in normal breathing levels. The turbine and a test package were manufactured using CNC milling on PMMA. Tests were performed at respiration flow rates between 5-25 lpm. The highest rotational speed was measured to be 9.84 krpm at 25 lpm, resulting in 8.96 mbar pressure drop across the device and 370 mW actuation power.

  10. Herd protection effect of N95 respirators in healthcare workers.

    Science.gov (United States)

    Chen, Xin; Chughtai, Abrar Ahmad; MacIntyre, Chandini Raina

    2017-12-01

    Objective To determine if there was herd protection conferred to unprotected healthcare workers (HCWs) by N95 respirators worn by colleagues. Methods Data were analysed from a prospective cluster randomized clinical trial conducted in Beijing, China between 1 December 2008 and 15 January 2009. A minimum compliance level (MCL) of N95 respirators for prevention of clinical respiratory illness (CRI) was set based on various compliance cut-offs. The CRI rates were compared between compliant (≥MCL) and non-compliant (protection from use of N95 respirators by colleagues within a hospital ward.

  11. Development of conformal respirator monitoring technology

    International Nuclear Information System (INIS)

    Shonka, J.J.; Weismann, J.J.; Logan, R.J.

    1997-04-01

    This report summarizes the results of a Small Business Innovative Research Phase II project to develop a modular, surface conforming respirator monitor to improve upon the manual survey techniques presently used by the nuclear industry. Research was performed with plastic scintillator and gas proportional modules in an effort to find the most conducive geometry for a surface conformal, position sensitive monitor. The respirator monitor prototype developed is a computer controlled, position-sensitive detection system employing 56 modular proportional counters mounted in molds conforming to the inner and outer surfaces of a commonly used respirator (Scott Model 801450-40). The molds are housed in separate enclosures and hinged to create a open-quotes waffle-ironclose quotes effect so that the closed monitor will simultaneously survey both surfaces of the respirator. The proportional counter prototype was also designed to incorporate Shonka Research Associates previously developed charge-division electronics. This research provided valuable experience into pixellated position sensitive detection systems. The technology developed can be adapted to other monitoring applications where there is a need for deployment of many traditional radiation detectors

  12. The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

    Directory of Open Access Journals (Sweden)

    Reinis Rutkis

    Full Text Available Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc., some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in other respiring bacteria and yeast. This effect takes place after air is introduced to glucose-consuming anaerobic cell suspension, and can be simulated using a kinetic model of the Entner-Doudoroff pathway in combination with a simple net reaction of NADH oxidation that does not involve oxidative phosphorylation. Although aeration hampers batch growth of respiring Z. mobilis culture due to accumulation of toxic byproducts, nevertheless under non-growing conditions respiration is shown to confer an adaptive advantage for the wild type over the non-respiring Ndh knock-out mutant. If cells get occasional access to limited amount of glucose for short periods of time, the elevated glucose uptake rate selectively improves survival of the respiring Z. mobilis phenotype.

  13. Further Results on Dynamic Additive Hazard Rate Model

    Directory of Open Access Journals (Sweden)

    Zhengcheng Zhang

    2014-01-01

    Full Text Available In the past, the proportional and additive hazard rate models have been investigated in the works. Nanda and Das (2011 introduced and studied the dynamic proportional (reversed hazard rate model. In this paper we study the dynamic additive hazard rate model, and investigate its aging properties for different aging classes. The closure of the model under some stochastic orders has also been investigated. Some examples are also given to illustrate different aging properties and stochastic comparisons of the model.

  14. On a Corporate Bond Pricing Model with Credit Rating Migration Risksand Stochastic Interest Rate

    Directory of Open Access Journals (Sweden)

    Jin Liang

    2017-10-01

    Full Text Available In this paper we study a corporate bond-pricing model with credit rating migration and astochastic interest rate. The volatility of bond price in the model strongly depends on potential creditrating migration and stochastic change of the interest rate. This new model improves the previousexisting models in which the interest rate is considered to be a constant. The existence, uniquenessand regularity of the solution for the model are established. Moreover, some properties includingthe smoothness of the free boundary are obtained. Furthermore, some numerical computations arepresented to illustrate the theoretical results.

  15. Latency-Rate servers & Dataflow models

    NARCIS (Netherlands)

    Wiggers, M.H.; Bekooij, Marco; Bekooij, Marco Jan Gerrit

    2006-01-01

    In the signal processing domain, dataflow graphs [2] [10] and their associated analysis techniques are a well-accepted modeling paradigm. The vertices of a dataflow graph represent functionality and are called actors, while the edges model which actors communicate with each other. Traditionally,

  16. MONETARY MODELS AND EXCHANGE RATE DETERMINATION ...

    African Journals Online (AJOL)

    Power Party [PPP] based on the law of one price asserts that the change in the exchange rate between .... exchange in international economic transactions has made it vitally evident that the management of ... One lesson from this episode is to ...

  17. A MIXED MODEL ANALYSIS OF SOIL CO2 EFFLUX AND NIGHT-TIME RESPIRATION RESPONSES TO ELEVATED CO2 AND TEMPERATURE

    Science.gov (United States)

    Abstract: We investigated the effects of elevated soil temperature and atmospheric CO2 on soil CO2 efflux and system respiration responses. The study was conducted in sun-lit controlled-environment chambers using two-year-old Douglas-fir seedlings grown in reconstructed litter-so...

  18. Using eddy covariance of CO2, 13CO2 and CH4, continuous soil respiration measurements, and PhenoCams to constrain a process-based biogeochemical model for carbon market-funded wetland restoration

    Science.gov (United States)

    Oikawa, P. Y.; Baldocchi, D. D.; Knox, S. H.; Sturtevant, C. S.; Verfaillie, J. G.; Dronova, I.; Jenerette, D.; Poindexter, C.; Huang, Y. W.

    2015-12-01

    We use multiple data streams in a model-data fusion approach to reduce uncertainty in predicting CO2 and CH4 exchange in drained and flooded peatlands. Drained peatlands in the Sacramento-San Joaquin River Delta, California are a strong source of CO2 to the atmosphere and flooded peatlands or wetlands are a strong CO2 sink. However, wetlands are also large sources of CH4 that can offset the greenhouse gas mitigation potential of wetland restoration. Reducing uncertainty in model predictions of annual CO2 and CH4 budgets is critical for including wetland restoration in Cap-and-Trade programs. We have developed and parameterized the Peatland Ecosystem Photosynthesis, Respiration, and Methane Transport model (PEPRMT) in a drained agricultural peatland and a restored wetland. Both ecosystem respiration (Reco) and CH4 production are a function of 2 soil carbon (C) pools (i.e. recently-fixed C and soil organic C), temperature, and water table height. Photosynthesis is predicted using a light use efficiency model. To estimate parameters we use a Markov Chain Monte Carlo approach with an adaptive Metropolis-Hastings algorithm. Multiple data streams are used to constrain model parameters including eddy covariance of CO2, 13CO2 and CH4, continuous soil respiration measurements and digital photography. Digital photography is used to estimate leaf area index, an important input variable for the photosynthesis model. Soil respiration and 13CO2 fluxes allow partitioning of eddy covariance data between Reco and photosynthesis. Partitioned fluxes of CO2 with associated uncertainty are used to parametrize the Reco and photosynthesis models within PEPRMT. Overall, PEPRMT model performance is high. For example, we observe high data-model agreement between modeled and observed partitioned Reco (r2 = 0.68; slope = 1; RMSE = 0.59 g C-CO2 m-2 d-1). Model validation demonstrated the model's ability to accurately predict annual budgets of CO2 and CH4 in a wetland system (within 14% and 1

  19. Fuzzy Control of Tidal volume, Respiration number and Pressure value

    OpenAIRE

    Hasan Guler; Fikret Ata

    2010-01-01

    In this study, control of tidal volume, respiration number and pressure value which are arrived to patient at mechanical ventilator device which is used in intensive care units were performed with fuzzy logic controller. The aim of this system is to reduce workload of aneshesiologist. By calculating tidal volume, respiration number and pressure value, the error Pe(k) between reference pressure value (Pref) and pressure of gas given ill person (Phasta) and error change rate ;#948;Pe(k) were co...

  20. Respiration in heterotrophic unicellular eukaryotic organisms.

    Science.gov (United States)

    Fenchel, Tom

    2014-08-01

    Surface:volume quotient, mitochondrial volume fraction, and their distribution within cells were investigated and oxygen gradients within and outside cells were modelled. Cell surface increases allometrically with cell size. Mitochondrial volume fraction is invariant with cell size and constitutes about 10% and mitochondria are predominantly found close to the outer membrane. The results predict that for small and medium sized protozoa maximum respiration rates should be proportional to cell volume (scaling exponent ≈1) and access to intracellular O2 is not limiting except at very low ambient O2-tensions. Available data do not contradict this and some evidence supports this interpretation. Cell size is ultimately limited because an increasing fraction of the mitochondria becomes exposed to near anoxic conditions with increasing cell size. The fact that mitochondria cluster close to the cell surface and the allometric change in cell shape with increasing cell size alleviates the limitation of aerobic life at low ambient O2-tension and for large cell size. Copyright © 2014 Elsevier GmbH. All rights reserved.

  1. Effect of body size and temperature on respiration of Galaxias maculatus (Pisces: Galaxiidae)

    Science.gov (United States)

    Milano, D.; Vigliano, P.H.; Beauchamp, David A.

    2017-01-01

    Body mass and temperature are primary determinants of metabolic rate in ectothermic animals. Oxygen consumption of post-larval Galaxias maculatus was measured in respirometry trials under different temperatures (5–21°C) and varying body masses (0.1–>1.5 g) spanning a relevant range of thermal conditions and sizes. Specific respiration rates (R in g O2 g−1 d−1) declined as a power function of body mass and increased exponentially with temperature and was expressed as: R = 0.0007 * W −0.31 * e 0.13 * T. The ability of this model to predict specific respiration rate was evaluated by comparing observed values with those predicted by the model. Our findings suggest that the respiration rate of G. maculatus is the result of multiple interactive processes (intrinsic and extrinsic factors) that modulate each other in ‘meta-mechanistic’ ways; this would help to explain the species’ ability to undergo the complex ontogenetic habitat shifts observed in the lakes of the Andean Patagonic range.

  2. Effects of simulated warming on soil respiration to XiaoPo lake

    Science.gov (United States)

    Zhao, Shuangkai; Chen, Kelong; Wu, Chengyong; Mao, Yahui

    2018-02-01

    The main flux of carbon cycling in terrestrial and atmospheric ecosystems is soil respiration, and soil respiration is one of the main ways of soil carbon output. This is of great significance to explore the dynamic changes of soil respiration rate and its effect on temperature rise, and the correlation between environmental factors and soil respiration. In this study, we used the open soil carbon flux measurement system (LI-8100, LI-COR, NE) in the experimental area of the XiaoPo Lake wetland in the Qinghai Lake Basin, and the Kobresia (Rs) were measured, and the soil respiration was simulated by simulated temperature (OTC) and natural state. The results showed that the temperature of 5 cm soil was 1.37 °C higher than that of the control during the experiment, and the effect of warming was obvious. The respiration rate of soil under warming and natural conditions showed obvious diurnal variation and monthly variation. The effect of warming on soil respiration rate was promoted and the effect of precipitation on soil respiration rate was inhibited. Further studies have shown that the relationship between soil respiration and 5 cm soil temperature under the control and warming treatments can be described by the exponential equation, and the correlation analysis between the two plots shows a very significant exponential relationship (p main influencing factor of soil respiration in this region.

  3. A Range-Based Multivariate Model for Exchange Rate Volatility

    NARCIS (Netherlands)

    B. Tims (Ben); R.J. Mahieu (Ronald)

    2003-01-01

    textabstractIn this paper we present a parsimonious multivariate model for exchange rate volatilities based on logarithmic high-low ranges of daily exchange rates. The multivariate stochastic volatility model divides the log range of each exchange rate into two independent latent factors, which are

  4. Universal Rate Model Selector: A Method to Quickly Find the Best-Fit Kinetic Rate Model for an Experimental Rate Profile

    Science.gov (United States)

    2017-08-01

    k2 – k1) 3.3 Universal Kinetic Rate Platform Development Kinetic rate models range from pure chemical reactions to mass transfer...14 8. The rate model that best fits the experimental data is a first-order or homogeneous catalytic reaction ...Avrami (7), and intraparticle diffusion (6) rate equations to name a few. A single fitting algorithm (kinetic rate model ) for a reaction does not

  5. Effect of single dose, fractionated, and hyperfractionated trunk irradiation on weight gain, respiration frequency, and survival in rats

    International Nuclear Information System (INIS)

    Kimler, B.F.; Giri, P.G.S.; Giri, U.P.; Cox, G.G.

    1986-01-01

    It is concluded that, in this rat trunk irradiation model, fractionation of a single dose into two equal doses separated by 4-6 h produced a sparing effect of approx. 5Gy as measured by delay in weight gain; approx. 4Gy as measured by increased respiration frequency; and approx. 6Gy as measured by survival. Fractionation into daily doses or hyperfractionation into twice-daily doses permitted an approximate doubling of the dose required for the same suppression of weight gain. For the respiration rates and survival endpoints, fractionation or hyperfractionation produced an even greater sparing effect since there was no increase in the respiration frequency at twice the doses that would produce changes if delivered within a few hours; and since essentially no lethality was observed at twice the doses that would kill 70%-100% of animals if delivered in one day. (UK)

  6. The effect of respiration buffer composition on mitochondrial metabolism and function

    OpenAIRE

    Wollenman, Lucas C.; Vander Ploeg, Matthew R.; Miller, Mackinzie L.; Zhang, Yizhu; Bazil, Jason N.

    2017-01-01

    Functional studies on isolated mitochondria critically rely on the right choice of respiration buffer. Differences in buffer composition can lead to dramatically different respiration rates leading to difficulties in comparing prior studies. The ideal buffer facilities high ADP-stimulated respiratory rates and minimizes substrate transport effects so that the ability to distinguish between various treatments and conditions is maximal. In this study, we analyzed a variety of respiration buffer...

  7. Respiratory hazard assessment of combined exposure to complete gasoline exhaust and respirable volcanic ash in a multicellular human lung model at the air-liquid interface

    Science.gov (United States)

    Tomasek, Ines; Horwell, Claire J.; Bisig, Christoph; Damby, David; Comte, Pierre; Czerwinski, Jan; Petri-Fink, Alke; Clift, Martin J D; Drasler, Barbara; Rothen-Rutishauer, Barbara

    2018-01-01

    Communities resident in urban areas located near active volcanoes can experience volcanic ash exposures during, and following, an eruption, in addition to sustained exposures to high concentrations of anthropogenic air pollutants (e.g., vehicle exhaust emissions). Inhalation of anthropogenic pollution is known to cause the onset of, or exacerbate, respiratory and cardiovascular diseases. It is further postulated similar exposure to volcanic ash can also affect such disease states. Understanding of the impact of combined exposure of volcanic ash and anthropogenic pollution to human health, however, remains limited.The aim of this study was to assess the biological impact of combined exposure to respirable volcanic ash (from Soufrière Hills volcano (SHV), Montserrat and Chaitén volcano (ChV), Chile; representing different magmatic compositions and eruption styles) and freshly-generated complete exhaust from a gasoline vehicle. A multicellular human lung model (an epithelial cell-layer composed of A549 alveolar type II-like cells complemented with human blood monocyte-derived macrophages and dendritic cells cultured at the air-liquid interface) was exposed to diluted exhaust (1:10) continuously for 6 h, followed by immediate exposure to the ash as a dry powder (0.54 ± 0.19 μg/cm2 and 0.39 ± 0.09 μg/cm2 for SHV and ChV ash, respectively). After an 18 h incubation, cells were exposed again for 6 h to diluted exhaust, and a final 18 h incubation (at 37 °C and 5% CO2). Cell cultures were then assessed for cytotoxic, oxidative stress and (pro-)inflammatory responses.Results indicate that, at all tested (sub-lethal) concentrations, co-exposures with both ash samples induced no significant expression of genes associated with oxidative stress (HMOX1, NQO1) or production of (pro-)inflammatory markers (IL-1β, IL-8, TNF-α) at the gene and protein levels. In summary, considering the employed experimental conditions, combined exposure of

  8. Respiratory hazard assessment of combined exposure to complete gasoline exhaust and respirable volcanic ash in a multicellular human lung model at the air-liquid interface.

    Science.gov (United States)

    Tomašek, Ines; Horwell, Claire J; Bisig, Christoph; Damby, David E; Comte, Pierre; Czerwinski, Jan; Petri-Fink, Alke; Clift, Martin J D; Drasler, Barbara; Rothen-Rutishauser, Barbara

    2018-07-01

    Communities resident in urban areas located near active volcanoes can experience volcanic ash exposures during, and following, an eruption, in addition to sustained exposures to high concentrations of anthropogenic air pollutants (e.g., vehicle exhaust emissions). Inhalation of anthropogenic pollution is known to cause the onset of, or exacerbate, respiratory and cardiovascular diseases. It is further postulated similar exposure to volcanic ash can also affect such disease states. Understanding of the impact of combined exposure of volcanic ash and anthropogenic pollution to human health, however, remains limited. The aim of this study was to assess the biological impact of combined exposure to respirable volcanic ash (from Soufrière Hills volcano (SHV), Montserrat and Chaitén volcano (ChV), Chile; representing different magmatic compositions and eruption styles) and freshly-generated complete exhaust from a gasoline vehicle. A multicellular human lung model (an epithelial cell-layer composed of A549 alveolar type II-like cells complemented with human blood monocyte-derived macrophages and dendritic cells cultured at the air-liquid interface) was exposed to diluted exhaust (1:10) continuously for 6 h, followed by immediate exposure to the ash as a dry powder (0.54 ± 0.19 μg/cm 2 and 0.39 ± 0.09 μg/cm 2 for SHV and ChV ash, respectively). After an 18 h incubation, cells were exposed again for 6 h to diluted exhaust, and a final 18 h incubation (at 37 °C and 5% CO 2 ). Cell cultures were then assessed for cytotoxic, oxidative stress and (pro-)inflammatory responses. Results indicate that, at all tested (sub-lethal) concentrations, co-exposures with both ash samples induced no significant expression of genes associated with oxidative stress (HMOX1, NQO1) or production of (pro-)inflammatory markers (IL-1β, IL-8, TNF-α) at the gene and protein levels. In summary, considering the employed experimental conditions, combined exposure of

  9. Diffusive fractionation complicates isotopic partitioning of autotrophic and heterotrophic sources of soil respiration.

    Science.gov (United States)

    Moyes, Andrew B; Gaines, Sarah J; Siegwolf, Rolf T W; Bowling, David R

    2010-11-01

    Carbon isotope ratios (δ¹³C) of heterotrophic and rhizospheric sources of soil respiration under deciduous trees were evaluated over two growing seasons. Fluxes and δ¹³C of soil respiratory CO₂ on trenched and untrenched plots were calculated from closed chambers, profiles of soil CO₂ mole fraction and δ¹³C and continuous open chambers. δ¹³C of respired CO₂ and bulk carbon were measured from excised leaves and roots and sieved soil cores. Large diel variations (>5‰) in δ¹³C of soil respiration were observed when diel flux variability was large relative to average daily fluxes, independent of trenching. Soil gas transport modelling supported the conclusion that diel surface flux δ¹³C variation was driven by non-steady state gas transport effects. Active roots were associated with high summertime soil respiration rates and around 1‰ enrichment in the daily average δ¹³C of the soil surface CO₂ flux. Seasonal δ¹³C variability of about 4‰ (most enriched in summer) was observed on all plots and attributed to the heterotrophic CO₂ source. © 2010 Blackwell Publishing Ltd.

  10. Monetary models and exchange rate determination: The Nigerian ...

    African Journals Online (AJOL)

    Monetary models and exchange rate determination: The Nigerian evidence. ... income levels and real interest rate differentials provide better forecasts of the ... partner can expect to suffer depreciation in the external value of her currency.

  11. Disclosure and Fit Capability of the Filtering Facepiece Respirator.

    Science.gov (United States)

    Lofgren, Don J

    2018-05-01

    The filtering facepiece air-purifying respirator is annually purchased in the tens of millions and widely used for worker protection from harmful airborne particulates. The workplace consumers of this safety product, i.e., employers, workers, and safety and health professionals, have assurances of its effectiveness through the respirator certification and disclosure requirements of the National Institute for Occupational Safety and Health. However, the certification of a critical performance requirement has been missing for the approved filtering facepiece respirator since 1995: fit capability. Without this certification, consumers continue to be at risk of purchasing a respirator model that may fit a small percentage of the intended users. This commentary updates and expands an earlier one by this author, addresses the consequences of poorly fitting certified models on the market and lack of disclosure, and calls for further action by National Institute for Occupational Safety and Health to meet the needs and expectations of the consumer.

  12. Temperature response of soil respiration largely unaltered with experimental warming

    DEFF Research Database (Denmark)

    Carey, Joanna C; Tang, Jianwu; Templer, Pamela H

    2016-01-01

    The respiratory release of carbon dioxide (CO2) from soil is a major yet poorly understood flux in the global carbon cycle. Climatic warming is hypothesized to increase rates of soil respiration, potentially fueling further increases in global temperatures. However, despite considerable scientific...... attention in recent decades, the overall response of soil respiration to anticipated climatic warming remains unclear. We synthesize the largest global dataset to date of soil respiration, moisture, and temperature measurements, totaling >3,800 observations representing 27 temperature manipulation studies......, spanning nine biomes and over 2 decades of warming. Our analysis reveals no significant differences in the temperature sensitivity of soil respiration between control and warmed plots in all biomes, with the exception of deserts and boreal forests. Thus, our data provide limited evidence of acclimation...

  13. Mitochondrial Respiration and Oxygen Tension.

    Science.gov (United States)

    Shaw, Daniel S; Meitha, Karlia; Considine, Michael J; Foyer, Christine H

    2017-01-01

    Measurements of respiration and oxygen tension in plant organs allow a precise understanding of mitochondrial capacity and function within the context of cellular oxygen metabolism. Here we describe methods that can be routinely used for the isolation of intact mitochondria, and the determination of respiratory electron transport, together with techniques for in vivo determination of oxygen tension and measurement of respiration by both CO 2 production and O 2 consumption that enables calculation of the respiratory quotient [CO 2 ]/[O 2 ].

  14. Respirable versus inhalable dust sampling

    International Nuclear Information System (INIS)

    Hondros, J.

    1987-01-01

    The ICRP uses a total inhalable dust figure as the basis of calculations on employee lung dose. This paper was written to look at one aspect of the Olympic Dam dust situation, namely, the inhalable versus respirable fraction of the dust cloud. The results of this study will determine whether it is possible to use respirable dust figures, as obtained during routine monitoring to help in the calculations of employee exposure to internal radioactive contaminants

  15. A Range-Based Multivariate Model for Exchange Rate Volatility

    OpenAIRE

    Tims, Ben; Mahieu, Ronald

    2003-01-01

    textabstractIn this paper we present a parsimonious multivariate model for exchange rate volatilities based on logarithmic high-low ranges of daily exchange rates. The multivariate stochastic volatility model divides the log range of each exchange rate into two independent latent factors, which are interpreted as the underlying currency specific components. Due to the normality of logarithmic volatilities the model can be estimated conveniently with standard Kalman filter techniques. Our resu...

  16. Stimulation of respiration in rat thymocytes induced by ionizing radiation

    International Nuclear Information System (INIS)

    Gudz, T.I.; Pandelova, I.G.; Novgorodov, S.A.

    1994-01-01

    The effect of X irradiation on the respiration of rat thymocytes was studied. An increase in the rate of O 2 uptake was observed 1 h after cells were irradiated with doses of 6-10 Gy. The radiation-induced increase in respiration could be blocked by oligomycin, an inhibitor of mitochondrial ATP synthase, suggesting control by increased cytoplasmic ATP turnover. The stimulation of respiration was not associated with changes in the activity of mitochondrial electron transfer enzymes or permeability of the inner membrane. Several inhibitors of processes which used ATP were screened for their effects on the basal respiration rate and on the radiation response. In irradiated thymocytes, an enhancement of inhibition of respiration by ouabain, La 3+ and cycloheximide was observed. These results indicate that the radiation-induced stimulation of respiration is due to changes in ion homeostasis and protein synthesis. The effect of X irradiation was shown to be independent of the redox status of nonprotein thiols and was not associated with detectable changes in some products of lipid peroxidation. The radiation-induced decrease in activity of superoxide dismutase suggests free radical involvement in deleterious effects of radiation. 43 refs., 2 figs., 3 tabs

  17. Controls on Ecosystem and Root Respiration in an Alaskan Peatland

    Science.gov (United States)

    McConnell, N. A.; McGuire, A. D.; Harden, J. W.; Kane, E. S.; Turetsky, M. R.

    2010-12-01

    Boreal ecosystems cover 14% of the vegetated surface on earth and account for 25-30% of the world’s soil carbon (C), mainly due to large carbon stocks in deep peat and frozen soil layers. While peatlands have served as historical sinks of carbon, global climate change may trigger re-release of C to the atmosphere and may turn these ecosystems into net C sources. Rates of C release from a peatland are determined by regional climate and local biotic and abiotic factors such as vegetation cover, thaw depth, and peat thickness. Soil CO2 fluxes are driven by both autotrophic (plant) respiration and heterotrophic (microbial) respiration. Thus, changes in plant and microbial activity in the soil will impact CO2 emissions from peatlands. In this study, we explored environmental and vegetation controls on ecosystem respiration and root respiration in a variety of wetland sites. The study was conducted at the Alaskan Peatland Experiment (APEX; www.uoguelph.ca/APEX) sites in the Bonanza Creek Experimental Forest located 35 km southwest of Fairbanks Alaska. We measured ecosystem respiration, root respiration, and monitored a suite of environmental variables along a vegetation and soil moisture gradient including a black spruce stand with permafrost, a shrubby site with permafrost, a tussock grass site, and a herbaceous open rich fen. Within the rich fen, we have been conducting water table manipulations including a control, lowered, and raised water table treatment. In each of our sites, we measured total ecosystem respiration using static chambers and root respiration by harvesting roots from the uppermost 20 cm and placing them in a root cuvette to obtain a root flux. Ecosystem respiration (ER) on a μmol/m2/sec basis varied across sites. Water table was a significant predictor of ER at the lowered manipulation site and temperature was a strong predictor at the control site in the rich fen. Water table and temperature were both significant predictors of ER at the raised

  18. Physiological Adjustments of Leaf Respiration to Atmospheric Warming in Betula alleghaniensis and Quercus rubra

    Energy Technology Data Exchange (ETDEWEB)

    Vollmar, A.; Gunderson, C.

    2006-01-01

    Global air temperatures are predicted to rise 1° to 4.5° Celsius by the year 2100. This climatic change is expected to have a great effect on the succession and migration of temperate deciduous forest species. Most physiologically based models of forest response to climatic change focus on the ecosystems as a whole instead of on individual tree species, assuming that the effects of warming on respiration are generally the same for each species, and that processes can not adjust to a changing climate. Experimental data suggest that physiological adjustments are possible, but there is a lack of data in deciduous species. In order to correctly model the effects of climate change on temperate species, species-specific respiration acclimation (adjustment) to rising temperatures is being determined in this experiment. Two temperate deciduous tree species Betula alleghaniensis (BA) and Quercus rubra (QR) were grown over a span of four years in open-top chambers and subjected to two different temperature treatments; ambient and ambient plus 4° Celsius (E4). Between 0530 hours and 1100 hours, respiration was measured over a range of leaf temperatures on several comparable, fully expanded leaves in each treatment. Circular punches were taken from the leaves and dried at 60°C to determine leaf mass per area (LMA). Respiration rates at a common temperature decreased by 15-18% in both species, and the entire resperation versus temperature curve shifted by at least 4°C, indicating a large degree of physiological acclimation. Foliar mass per area decreased with increasing growth temperature for both species. It can be concluded that there is a relationship between leaf respiration and foliar mass as it relates to respiratory acclimation, and that these two species had similar patterns of adjustment to warming.

  19. Biophysical controls on soil respiration in the dominant patch types of an old-growth, mixed-conifer forest

    Science.gov (United States)

    Siyan Ma; Jiquan Chen; John R. Butnor; Malcolm North; Eugénie S. Euskirchen; Brian Oakley

    2005-01-01

    Little is known about biophysical controls on soil respiration in California's Sierra Nevada old-growth, mixed-conifer forests. Using portable and automated soil respiration sampling units, we measured soil respiration rate (SRR) in three dominant patch types: closed canopy (CC), ceanothus-dominated patches (CECO), and open canopy (OC). SRR varied significantly...

  20. Secondary metabolites of the grapevine pathogen Eutypa lata inhibit mitochondrial respiration, based on a model bioassay using the yeast Saccharomyces cerevisiae.

    Science.gov (United States)

    Kim, Jong H; Mahoney, Noreen; Chan, Kathleen L; Molyneux, Russell J; Campbell, Bruce C

    2004-10-01

    Acetylenic phenols and a chromene isolated from the grapevine fungal pathogen Eutypa lata were examined for mode of toxicity. The compounds included eutypine (4-hydroxy-3-[3-methyl-3-butene-1-ynyl] benzyl aldehyde), eutypinol (4-hydroxy-3-[3-methyl-3-butene-1-ynyl] benzyl alcohol), eulatachromene, 2- isoprenyl-5-formyl-benzofuran, siccayne, and eulatinol. A bioassay using the yeast Saccharomyces cerevisiae showed that all compounds were either lethal or inhibited growth. A respiratory assay using 2,3,5-triphenyltetrazolium (TTC) indicated that eutypinol and eulatachromene inhibited mitochondrial respiration in wild-type yeast. Bioassays also showed that 2- isoprenyl-5-formyl-benzofuran and siccayne inhibited mitochondrial respiration in the S. cerevisiae deletion mutant vph2Delta, lacking a vacuolar type H (+) ATPase (V-ATPase) assembly protein. Cell growth of tsa1Delta, a deletion mutant of S. cerevisiae lacking a thioredoxin peroxidase (cTPx I), was greatly reduced when grown on media containing eutypinol or eulatachromene and exposed to hydrogen peroxide (H(2)O(2)) as an oxidative stress. This reduction in growth establishes the toxic mode of action of these compounds through inhibition of mitochondrial respiration.

  1. The sensitivity of soil respiration to soil temperature, moisture, and carbon supply at the global scale.

    Science.gov (United States)

    Hursh, Andrew; Ballantyne, Ashley; Cooper, Leila; Maneta, Marco; Kimball, John; Watts, Jennifer

    2017-05-01

    Soil respiration (Rs) is a major pathway by which fixed carbon in the biosphere is returned to the atmosphere, yet there are limits to our ability to predict respiration rates using environmental drivers at the global scale. While temperature, moisture, carbon supply, and other site characteristics are known to regulate soil respiration rates at plot scales within certain biomes, quantitative frameworks for evaluating the relative importance of these factors across different biomes and at the global scale require tests of the relationships between field estimates and global climatic data. This study evaluates the factors driving Rs at the global scale by linking global datasets of soil moisture, soil temperature, primary productivity, and soil carbon estimates with observations of annual Rs from the Global Soil Respiration Database (SRDB). We find that calibrating models with parabolic soil moisture functions can improve predictive power over similar models with asymptotic functions of mean annual precipitation. Soil temperature is comparable with previously reported air temperature observations used in predicting Rs and is the dominant driver of Rs in global models; however, within certain biomes soil moisture and soil carbon emerge as dominant predictors of Rs. We identify regions where typical temperature-driven responses are further mediated by soil moisture, precipitation, and carbon supply and regions in which environmental controls on high Rs values are difficult to ascertain due to limited field data. Because soil moisture integrates temperature and precipitation dynamics, it can more directly constrain the heterotrophic component of Rs, but global-scale models tend to smooth its spatial heterogeneity by aggregating factors that increase moisture variability within and across biomes. We compare statistical and mechanistic models that provide independent estimates of global Rs ranging from 83 to 108 Pg yr -1 , but also highlight regions of uncertainty

  2. Aspect-Aware Latent Factor Model: Rating Prediction with Ratings and Reviews

    OpenAIRE

    Cheng, Zhiyong; Ding, Ying; Zhu, Lei; Kankanhalli, Mohan

    2018-01-01

    Although latent factor models (e.g., matrix factorization) achieve good accuracy in rating prediction, they suffer from several problems including cold-start, non-transparency, and suboptimal recommendation for local users or items. In this paper, we employ textual review information with ratings to tackle these limitations. Firstly, we apply a proposed aspect-aware topic model (ATM) on the review text to model user preferences and item features from different aspects, and estimate the aspect...

  3. Combined exposure of diesel exhaust particles and respirable Soufrière Hills volcanic ash causes a (pro-)inflammatory response in an in vitro multicellular epithelial tissue barrier model

    Science.gov (United States)

    Tomašek, Ines; Horwell, Claire J.; Damby, David; Barošová, Hana; Geers, Christoph; Petri-Fink, Alke; Rothen-Rutishauser, Barbara; Clift, Martin J. D.

    2016-01-01

    BackgroundThere are justifiable health concerns regarding the potential adverse effects associated with human exposure to volcanic ash (VA) particles, especially when considering communities living in urban areas already exposed to heightened air pollution. The aim of this study was, therefore, to gain an imperative, first understanding of the biological impacts of respirable VA when exposed concomitantly with diesel particles.MethodsA sophisticated in vitro 3D triple cell co-culture model of the human alveolar epithelial tissue barrier was exposed to either a single or repeated dose of dry respirable VA (deposited dose of 0.26 ± 0.09 or 0.89 ± 0.29 μg/cm2, respectively) from Soufrière Hills volcano, Montserrat for a period of 24 h at the air-liquid interface (ALI). Subsequently, co-cultures were exposed to co-exposures of single or repeated VA and diesel exhaust particles (DEP; NIST SRM 2975; 0.02 mg/mL), a model urban pollutant, at the pseudo-ALI. The biological impact of each individual particle type was also analysed under these precise scenarios. The cytotoxic (LDH release), oxidative stress (depletion of intracellular GSH) and (pro-)inflammatory (TNF-α, IL-8 and IL-1β) responses were assessed after the particulate exposures. The impact of VA exposure upon cell morphology, as well as its interaction with the multicellular model, was visualised via confocal laser scanning microscopy (LSM) and scanning electron microscopy (SEM), respectively.ResultsThe combination of respirable VA and DEP, in all scenarios, incited an heightened release of TNF-α and IL-8 as well as significant increases in IL-1β, when applied at sub-lethal doses to the co-culture compared to VA exposure alone. Notably, the augmented (pro-)inflammatory responses observed were not mediated by oxidative stress. LSM supported the quantitative assessment of cytotoxicity, with no changes in cell morphology within the barrier model evident. A direct interaction of the VA with all

  4. Studies on photosynthesis and respiration in some marine macroalgae of the Goa coast

    Digital Repository Service at National Institute of Oceanography (India)

    Dhargalkar, V.K.

    Primary production and respiration rates were measured in 14 marine macroalgal species from the Goa coast. The highest production rate was observed in Hypnea musciformis and the lowest in Laurencia papillosa. Net production rates in these 14 species...

  5. A model for C-14 tracer evaporative rate analysis (ERA)

    International Nuclear Information System (INIS)

    Gardner, R.P.; Verghese, K.

    1993-01-01

    A simple model has been derived and tested for the C-14 tracer evaporative rate analysis (ERA) method. It allows the accurate determination of the evaporative rate coefficient of the C-14 tracer detector in the presence of variable evaporation rates of the detector solvent and variable background counting rates. The evaporation rate coefficient should be the most fundamental parameter available in this analysis method and, therefore, its measurements with the proposed model should allow the most direct correlations to be made with the system properties of interest such as surface cleanliness. (author)

  6. A critique of recent models for human error rate assessment

    International Nuclear Information System (INIS)

    Apostolakis, G.E.

    1988-01-01

    This paper critically reviews two groups of models for assessing human error rates under accident conditions. The first group, which includes the US Nuclear Regulatory Commission (NRC) handbook model and the human cognitive reliability (HCR) model, considers as fundamental the time that is available to the operators to act. The second group, which is represented by the success likelihood index methodology multiattribute utility decomposition (SLIM-MAUD) model, relies on ratings of the human actions with respect to certain qualitative factors and the subsequent derivation of error rates. These models are evaluated with respect to two criteria: the treatment of uncertainties and the internal coherence of the models. In other words, this evaluation focuses primarily on normative aspects of these models. The principal findings are as follows: (1) Both of the time-related models provide human error rates as a function of the available time for action and the prevailing conditions. However, the HCR model ignores the important issue of state-of-knowledge uncertainties, dealing exclusively with stochastic uncertainty, whereas the model presented in the NRC handbook handles both types of uncertainty. (2) SLIM-MAUD provides a highly structured approach for the derivation of human error rates under given conditions. However, the treatment of the weights and ratings in this model is internally inconsistent. (author)

  7. Data analysis using the Binomial Failure Rate common cause model

    International Nuclear Information System (INIS)

    Atwood, C.L.

    1983-09-01

    This report explains how to use the Binomial Failure Rate (BFR) method to estimate common cause failure rates. The entire method is described, beginning with the conceptual model, and covering practical issues of data preparation, treatment of variation in the failure rates, Bayesian estimation of the quantities of interest, checking the model assumptions for lack of fit to the data, and the ultimate application of the answers

  8. [Changes in cell respiration of postural muscle fibers under long-term gravitational unloading after dietary succinate supplementation].

    Science.gov (United States)

    Ogneva, I V; Veselova, O M; Larina, I M

    2011-01-01

    The intensity of cell respiration of the rat m. soleus, m. gastrocnemius c.m. and tibialis anterior fibers during 35-day gravitational unloading, with the addition of succinate in the diet at a dosage rate of 50 mg per 1 kg animal weight has been investigated. The gravitational unloading was modeled by antiorthostatic hindlimb suspension. The intensity of cell respiration was estimated by polarography. It was shown that the rate of oxygen consumption by soleus and gastrocnemius fibers on endogenous and exogenous substrates and with the addition of ADP decreases after the discharge. This may be associated with the transition to the glycolytic energy path due to a decrease in the EMG-activity. At the same time, the respiration rate after the addition of exogenous substrates in soleus fibers did not increase, indicating a disturbance in the function of the NCCR-section of the respiratory chain and more pronounced changes in the structure of muscle fibers. In tibialis anterior fibers, no changes in oxygen consumption velocity were observed. The introduction of succinate to the diet of rats makes it possible to prevent the negative effects of hypokinesia, although it reduces the basal level of intensity of cell respiration.

  9. Tai Chi training reduced coupling between respiration and postural control.

    Science.gov (United States)

    Holmes, Matthew L; Manor, Brad; Hsieh, Wan-hsin; Hu, Kun; Lipsitz, Lewis A; Li, Li

    2016-01-01

    In order to maintain stable upright stance, the postural control system must account for the continuous perturbations to the body's center-of-mass including those caused by spontaneous respiration. Both aging and disease increase "posturo-respiratory synchronization;" which reflects the degree to which respiration affects postural sway fluctuations over time. Tai Chi training emphasizes the coordination of respiration and bodily movements and may therefore optimize the functional interaction between these two systems. The purpose of the project was to examine the effect of Tai Chi training on the interaction between respiration and postural control in older adults. We hypothesized that Tai Chi training would improve the ability of the postural control system to compensate for respiratory perturbations and thus, reduce posturo-respiratory synchronization. Participants were recruited from supportive housing facilities and randomized to a 12-week Tai Chi intervention (n=28; 86 ± 5 yrs) or educational-control program (n=34, 85 ± 6 yrs). Standing postural sway and respiration were simultaneously recorded with a force plate and respiratory belt under eyes-open and eyes-closed conditions. Posturo-respiratory synchronization was determined by quantifying the variation of the phase relationship between the dominant oscillatory mode of respiration and corresponding oscillations within postural sway. Groups were similar in age, gender distribution, height, body mass, and intervention compliance. Neither intervention altered average sway speed, sway magnitude or respiratory rate. As compared to the education-control group, however, Tai Chi training reduced posturo-respiratory synchronization when standing with eyes open or closed (ppostural control or respiration, yet reduced the coupling between respiration and postural control. The beneficial effects of Tai Chi training may therefore stem in part from optimization of this multi-system interaction. Copyright © 2015

  10. Prediction of pipeline corrosion rate based on grey Markov models

    International Nuclear Information System (INIS)

    Chen Yonghong; Zhang Dafa; Peng Guichu; Wang Yuemin

    2009-01-01

    Based on the model that combined by grey model and Markov model, the prediction of corrosion rate of nuclear power pipeline was studied. Works were done to improve the grey model, and the optimization unbiased grey model was obtained. This new model was used to predict the tendency of corrosion rate, and the Markov model was used to predict the residual errors. In order to improve the prediction precision, rolling operation method was used in these prediction processes. The results indicate that the improvement to the grey model is effective and the prediction precision of the new model combined by the optimization unbiased grey model and Markov model is better, and the use of rolling operation method may improve the prediction precision further. (authors)

  11. Real Exchange Rate and Productivity in an OLG Model

    OpenAIRE

    Thi Hong Thinh DOAN; Karine GENTE

    2013-01-01

    This article develops an overlapping generations model to show how demography and savings affect the relationship between real exchange rate (RER) and productivity. In high-saving (low-saving) countries and/or low-population-growth-rate countries, a rise in productivity leads to a real depreciation (appreciation) whereas the RER may appreciate or depreciate in highproduction-growth-rate. Using panel data, we conclude that a rise in productivity generally causes a real exchange rate appreciati...

  12. Exchange rate predictability and state-of-the-art models

    OpenAIRE

    Yeșin, Pınar

    2016-01-01

    This paper empirically evaluates the predictive performance of the International Monetary Fund's (IMF) exchange rate assessments with respect to future exchange rate movements. The assessments of real trade-weighted exchange rates were conducted from 2006 to 2011, and were based on three state-of-the-art exchange rate models with a medium-term focus which were developed by the IMF. The empirical analysis using 26 advanced and emerging market economy currencies reveals that the "diagnosis" of ...

  13. Dynamic characteristics of soil respiration in Yellow River Delta wetlands, China

    Science.gov (United States)

    Wang, Xiao; Luo, Xianxiang; Jia, Hongli; Zheng, Hao

    2018-02-01

    The stable soil carbon (C) pool in coastal wetlands, referred to as "blue C", which has been extensively damaged by climate change and soil degradation, is of importance to maintain global C cycle. Therefore, to investigate the dynamic characteristics of soil respiration rate and evaluate C budgets in coastal wetlands are urgently. In this study, the diurnal and seasonal variation of soil respiration rate in the reed wetland land (RL) and the bare wetland land (BL) was measured in situ with the dynamic gas-infrared CO2 method in four seasons, and the factors impacted on the dynamic characteristics of soil respiration were investigated. The results showed that the diurnal variation of soil respiration rate consistently presented a "U" curve pattern in April, July, and September, with the maximum values at 12:00 a.m. and the minimum values at 6:00 a.m. In the same season, the diurnal soil respiration rate in RL was significantly greater than those in BL (P respiration rate was 0.14, 0.42, and 0.39 μmol m-2 s-1 in RL, 0.05, 0.22, 0.13, and 0.01 μmol m-2 s-1 in BL, respectively. Soil surface temperature was the primary factor that influenced soil respiration, which was confirmed by the exponential positive correlation between the soil respiration rate and soil surface temperature in BL and RL (P respiration, confirming by the significantly negative correlation between soil respiration rate and the content of soluble salt. These results will be useful for understanding the mechanisms underlying soil respiration and elevating C sequestration potential in the coastal wetlands.

  14. Maintenance, endogeneous, respiration, lysis, decay and predation

    DEFF Research Database (Denmark)

    loosdrecht, Marc C. M. Van; Henze, Mogens

    1999-01-01

    mechanism is microbiologically correct. The lysis/decay model mechanism is a strongly simplified representation of reality. This paper tries to review the processes grouped under endogenous respiration in activated sludge models. Mechanisms and processes such as maintenance, lysis, internal and external...... decay, predation and death-regeneration are discussed. From recent microbial research it has become evident that cells do not die by themselves. Bacteria are however subject to predation by protozoa. Bacteria store reserve polymers that in absence of external substrate are used for growth...

  15. Martingale Regressions for a Continuous Time Model of Exchange Rates

    OpenAIRE

    Guo, Zi-Yi

    2017-01-01

    One of the daunting problems in international finance is the weak explanatory power of existing theories of the nominal exchange rates, the so-called “foreign exchange rate determination puzzle”. We propose a continuous-time model to study the impact of order flow on foreign exchange rates. The model is estimated by a newly developed econometric tool based on a time-change sampling from calendar to volatility time. The estimation results indicate that the effect of order flow on exchange rate...

  16. Targeting mitochondrial respiration as a therapeutic strategy for cervical cancer.

    Science.gov (United States)

    Tian, Shenglan; Chen, Heng; Tan, Wei

    2018-05-23

    Targeting mitochondrial respiration has been documented as an effective therapeutic strategy in cancer. However, the impact of mitochondrial respiration inhibition on cervical cancer cells are not well elucidated. Using a panel of cervical cancer cell lines, we show that an existing drug atovaquone is active against the cervical cancer cells with high profiling of mitochondrial biogenesis. Atovaquone inhibited proliferation and induced apoptosis with varying efficacy among cervical cancer cell lines regardless of HPV infection, cellular origin and their sensitivity to paclitaxel. We further demonstrated that atovaquone acts on cervical cancer cells via inhibiting mitochondrial respiration. In particular, atovaquone specifically inhibited mitochondrial complex III but not I, II or IV activity, leading to respiration inhibition and energy crisis. Importantly, we found that the different sensitivity of cervical cancer cell lines to atovaquone were due to their differential level of mitochondrial biogenesis and dependency to mitochondrial respiration. In addition, we demonstrated that the in vitro observations were translatable to in vivo cervical cancer xenograft mouse model. Our findings suggest that the mitochondrial biogenesis varies among patients with cervical cancer. Our work also suggests that atovaquone is a useful addition to cervical cancer treatment, particularly to those with high dependency on mitochondrial respiration. Copyright © 2018 Elsevier Inc. All rights reserved.

  17. Facepiece leakage and fitting of respirators

    International Nuclear Information System (INIS)

    White, J.M.

    1978-05-01

    The ways in which airborne contaminants can penetrate respirators and the factors which affect the fit of respirators are discussed. The fit of the respirator to the face is shown to be the most critical factor affecting the protection achieved by the user. Qualitative and quantitative fit testing techniques are described and their application to industrial respirator programs is examined. Quantitative measurement of the leakage of a respirator while worn can be used to numerically indicate the protection achieved. These numbers, often referred to as protection factors, are sometimes used as the basis for selecting suitable respirators and this practice is reviewed. (author)

  18. EXCHANGE-RATES FORECASTING: EXPONENTIAL SMOOTHING TECHNIQUES AND ARIMA MODELS

    Directory of Open Access Journals (Sweden)

    Dezsi Eva

    2011-07-01

    Full Text Available Exchange rates forecasting is, and has been a challenging task in finance. Statistical and econometrical models are widely used in analysis and forecasting of foreign exchange rates. This paper investigates the behavior of daily exchange rates of the Romanian Leu against the Euro, United States Dollar, British Pound, Japanese Yen, Chinese Renminbi and the Russian Ruble. Smoothing techniques are generated and compared with each other. These models include the Simple Exponential Smoothing technique, as the Double Exponential Smoothing technique, the Simple Holt-Winters, the Additive Holt-Winters, namely the Autoregressive Integrated Moving Average model.

  19. Endotoxin-induced basal respiration alterations of renal HK-2 cells: A sign of pathologic metabolism down-regulation

    Energy Technology Data Exchange (ETDEWEB)

    Quoilin, C., E-mail: cquoilin@ulg.ac.be [Laboratory of Biomedical Spectroscopy, Department of Physics, University of Liege, 4000 Liege (Belgium); Mouithys-Mickalad, A. [Center of Oxygen Research and Development, Department of Chemistry, University of Liege, 4000 Liege (Belgium); Duranteau, J. [Department of Anaesthesia and Surgical ICU, CHU Bicetre, University Paris XI Sud, 94275 Le Kremlin Bicetre (France); Gallez, B. [Biomedical Magnetic Resonance Group, Louvain Drug Research Institute, Universite catholique de Louvain, 1200 Brussels (Belgium); Hoebeke, M. [Laboratory of Biomedical Spectroscopy, Department of Physics, University of Liege, 4000 Liege (Belgium)

    2012-06-29

    Highlights: Black-Right-Pointing-Pointer A HK-2 cells model of inflammation-induced acute kidney injury. Black-Right-Pointing-Pointer Two oximetry methods: high resolution respirometry and ESR spectroscopy. Black-Right-Pointing-Pointer Oxygen consumption rates of renal cells decrease when treated with LPS. Black-Right-Pointing-Pointer Cells do not recover normal respiration when the LPS treatment is removed. Black-Right-Pointing-Pointer This basal respiration alteration is a sign of pathologic metabolism down-regulation. -- Abstract: To study the mechanism of oxygen regulation in inflammation-induced acute kidney injury, we investigate the effects of a bacterial endotoxin (lipopolysaccharide, LPS) on the basal respiration of proximal tubular epithelial cells (HK-2) both by high-resolution respirometry and electron spin resonance spectroscopy. These two complementary methods have shown that HK-2 cells exhibit a decreased oxygen consumption rate when treated with LPS. Surprisingly, this cellular respiration alteration persists even after the stress factor was removed. We suggested that this irreversible decrease in renal oxygen consumption after LPS challenge is related to a pathologic metabolic down-regulation such as a lack of oxygen utilization by cells.

  20. Can producer currency pricing models generate volatile real exchange rates?

    OpenAIRE

    Povoledo, L.

    2012-01-01

    If the elasticities of substitution between traded and nontraded and between Home and Foreign traded goods are sufficiently low, then the real exchange rate generated by a model with full producer currency pricing is as volatile as in the data.

  1. Improved air ventilation rate estimation based on a statistical model

    International Nuclear Information System (INIS)

    Brabec, M.; Jilek, K.

    2004-01-01

    A new approach to air ventilation rate estimation from CO measurement data is presented. The approach is based on a state-space dynamic statistical model, allowing for quick and efficient estimation. Underlying computations are based on Kalman filtering, whose practical software implementation is rather easy. The key property is the flexibility of the model, allowing various artificial regimens of CO level manipulation to be treated. The model is semi-parametric in nature and can efficiently handle time-varying ventilation rate. This is a major advantage, compared to some of the methods which are currently in practical use. After a formal introduction of the statistical model, its performance is demonstrated on real data from routine measurements. It is shown how the approach can be utilized in a more complex situation of major practical relevance, when time-varying air ventilation rate and radon entry rate are to be estimated simultaneously from concurrent radon and CO measurements

  2. Modelling Exchange Rate Volatility by Macroeconomic Fundamentals in Pakistan

    OpenAIRE

    Munazza Jabeen; Saud Ahmad Khan

    2014-01-01

    What drives volatility in foreign exchange market in Pakistan? This paper undertakes an analysis of modelling exchange rate volatility in Pakistan by potential macroeconomic fundamentals well-known in the economic literature. For this, monthly data on Pak Rupee exchange rates in the terms of major currencies (US Dollar, British Pound, Canadian Dollar and Japanese Yen) and macroeconomics fundamentals is taken from April, 1982 to November, 2011. The results show thatthe PKR-USD exchange rate vo...

  3. Growth rate in the dynamical dark energy models

    International Nuclear Information System (INIS)

    Avsajanishvili, Olga; Arkhipova, Natalia A.; Samushia, Lado; Kahniashvili, Tina

    2014-01-01

    Dark energy models with a slowly rolling cosmological scalar field provide a popular alternative to the standard, time-independent cosmological constant model. We study the simultaneous evolution of background expansion and growth in the scalar field model with the Ratra-Peebles self-interaction potential. We use recent measurements of the linear growth rate and the baryon acoustic oscillation peak positions to constrain the model parameter α that describes the steepness of the scalar field potential. (orig.)

  4. Growth rate in the dynamical dark energy models.

    Science.gov (United States)

    Avsajanishvili, Olga; Arkhipova, Natalia A; Samushia, Lado; Kahniashvili, Tina

    Dark energy models with a slowly rolling cosmological scalar field provide a popular alternative to the standard, time-independent cosmological constant model. We study the simultaneous evolution of background expansion and growth in the scalar field model with the Ratra-Peebles self-interaction potential. We use recent measurements of the linear growth rate and the baryon acoustic oscillation peak positions to constrain the model parameter [Formula: see text] that describes the steepness of the scalar field potential.

  5. Soil respiration dynamics in the middle taiga of Central Siberia region

    Science.gov (United States)

    Makhnykina, Anastasia; Prokushkin, Anatoly; Polosukhina, Daria

    2017-04-01

    A large amount of carbon in soil is released to the atmosphere through soil respiration, which is the main pathway of transferring carbon from terrestrial ecosystems (Comstedt et al., 2011). Considering that boreal forests is a large terrestrial sink (Tans et al., 1990) and represent approximately 11 % of the Earth's total land area (Gower et al., 2001), even a small change in soil respiration could significantly intensify - or mitigate - current atmospheric increases of CO2, with potential feedbacks to climate change. The objectives of the present study are: (a) to study the dynamic of CO2 emission from the soil surface during summer season (from May to October); (b) to identify the reaction of soil respiration to different amount of precipitation as the main limiting factor in the region. The research was located in the pine forests in Central Siberia (60°N, 90°E), Russia. Sample plots were represented by the lichen pine forest, moss pine forest, mixed forest and anthropogenic destroyed area. We used the automated soil CO2 flux system based on the infrared gas analyzer -LI-8100 for measuring the soil efflux. Soil temperature was measured with Soil Temperature Probe Type E in three depths -5, 10, 15 cm. Volumetric soil moisture was measured with Theta Probe Model ML2. The presence and type of ground cover substantially affects the value of soil respiration fluxes. The carbon dioxide emission from the soil surface averaged 5.4 ±2.3 μmol CO2 m-2 s-1. The destroyed area without plant cover demonstrated the lowest soil respiration (0.1-5.6 μmol CO2 m-2 s-1). The lowest soil respiration among forested areas was observed in the feathermoss pine forest. The lichen pine forest was characterized by the intermediate values of soil respiration. The maximum soil respiration values and seasonal fluctuations were obtained in the mixed forest (2.3-29.3 μmol CO2 m-2 s-1). The analysis of relation between soil CO2 efflux and climatic conditions identified the parameters with

  6. Response of soil respiration to soil temperature and moisture in a 50-year-old oriental arborvitae plantation in China.

    Science.gov (United States)

    Yu, Xinxiao; Zha, Tianshan; Pang, Zhuo; Wu, Bin; Wang, Xiaoping; Chen, Guopeng; Li, Chunping; Cao, Jixin; Jia, Guodong; Li, Xizhi; Wu, Hailong

    2011-01-01

    China possesses large areas of plantation forests which take up great quantities of carbon. However, studies on soil respiration in these plantation forests are rather scarce and their soil carbon flux remains an uncertainty. In this study, we used an automatic chamber system to measure soil surface flux of a 50-year-old mature plantation of Platycladus orientalis at Jiufeng Mountain, Beijing, China. Mean daily soil respiration rates (R(s)) ranged from 0.09 to 4.87 µmol CO(2) m(-2) s(-1), with the highest values observed in August and the lowest in the winter months. A logistic model gave the best fit to the relationship between hourly R(s) and soil temperature (T(s)), explaining 82% of the variation in R(s) over the annual cycle. The annual total of soil respiration estimated from the logistic model was 645±5 g C m(-2) year(-1). The performance of the logistic model was poorest during periods of high soil temperature or low soil volumetric water content (VWC), which limits the model's ability to predict the seasonal dynamics of R(s). The logistic model will potentially overestimate R(s) at high T(s) and low VWC. Seasonally, R(s) increased significantly and linearly with increasing VWC in May and July, in which VWC was low. In the months from August to November, inclusive, in which VWC was not limiting, R(s) showed a positively exponential relationship with T(s). The seasonal sensitivity of soil respiration to T(s) (Q(10)) ranged from 0.76 in May to 4.38 in October. It was suggested that soil temperature was the main determinant of soil respiration when soil water was not limiting.

  7. Analysis of sensory ratings data with cumulative link models

    DEFF Research Database (Denmark)

    Christensen, Rune Haubo Bojesen; Brockhoff, Per B.

    2013-01-01

    Examples of categorical rating scales include discrete preference, liking and hedonic rating scales. Data obtained on these scales are often analyzed with normal linear regression methods or with omnibus Pearson chi2 tests. In this paper we propose to use cumulative link models that allow for reg...

  8. Glycolysis-respiration relationships in a neuroblastoma cell line.

    Science.gov (United States)

    Swerdlow, Russell H; E, Lezi; Aires, Daniel; Lu, Jianghua

    2013-04-01

    Although some reciprocal glycolysis-respiration relationships are well recognized, the relationship between reduced glycolysis flux and mitochondrial respiration has not been critically characterized. We concomitantly measured the extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) of SH-SY5Y neuroblastoma cells under free and restricted glycolysis flux conditions. Under conditions of fixed energy demand ECAR and OCR values showed a reciprocal relationship. In addition to observing an expected Crabtree effect in which increasing glucose availability raised the ECAR and reduced the OCR, a novel reciprocal relationship was documented in which reducing the ECAR via glucose deprivation or glycolysis inhibition increased the OCR. Substituting galactose for glucose, which reduces net glycolysis ATP yield without blocking glycolysis flux, similarly reduced the ECAR and increased the OCR. We further determined how reduced ECAR conditions affect proteins that associate with energy sensing and energy response pathways. ERK phosphorylation, SIRT1, and HIF1a decreased while AKT, p38, and AMPK phosphorylation increased. These data document a novel intracellular glycolysis-respiration effect in which restricting glycolysis flux increases mitochondrial respiration. Since this effect can be used to manipulate cell bioenergetic infrastructures, this particular glycolysis-respiration effect can practically inform the development of new mitochondrial medicine approaches. Copyright © 2012 Elsevier B.V. All rights reserved.

  9. Rate-control algorithms testing by using video source model

    DEFF Research Database (Denmark)

    Belyaev, Evgeny; Turlikov, Andrey; Ukhanova, Anna

    2008-01-01

    In this paper the method of rate control algorithms testing by the use of video source model is suggested. The proposed method allows to significantly improve algorithms testing over the big test set.......In this paper the method of rate control algorithms testing by the use of video source model is suggested. The proposed method allows to significantly improve algorithms testing over the big test set....

  10. A MODEL OF RATING FOR BANKS IN ROMANIA

    Directory of Open Access Journals (Sweden)

    POPA ANAMARIA

    2012-07-01

    Full Text Available Abstract.In the paper the authors present a model of rating for the banking system. Thus we took into account the records of 11 banks in Romania, based on annual financial reports. The model classified the banks in seven categories according with notes used by Standard Poor’s and Moody’s rating Agencies.

  11. Calcium Co-regulates Oxidative Metabolism and ATP Synthase-dependent Respiration in Pancreatic Beta Cells

    Science.gov (United States)

    De Marchi, Umberto; Thevenet, Jonathan; Hermant, Aurelie; Dioum, Elhadji; Wiederkehr, Andreas

    2014-01-01

    Mitochondrial energy metabolism is essential for glucose-induced calcium signaling and, therefore, insulin granule exocytosis in pancreatic beta cells. Calcium signals are sensed by mitochondria acting in concert with mitochondrial substrates for the full activation of the organelle. Here we have studied glucose-induced calcium signaling and energy metabolism in INS-1E insulinoma cells and human islet beta cells. In insulin secreting cells a surprisingly large fraction of total respiration under resting conditions is ATP synthase-independent. We observe that ATP synthase-dependent respiration is markedly increased after glucose stimulation. Glucose also causes a very rapid elevation of oxidative metabolism as was followed by NAD(P)H autofluorescence. However, neither the rate of the glucose-induced increase nor the new steady-state NAD(P)H levels are significantly affected by calcium. Our findings challenge the current view, which has focused mainly on calcium-sensitive dehydrogenases as the target for the activation of mitochondrial energy metabolism. We propose a model of tight calcium-dependent regulation of oxidative metabolism and ATP synthase-dependent respiration in beta cell mitochondria. Coordinated activation of matrix dehydrogenases and respiratory chain activity by calcium allows the respiratory rate to change severalfold with only small or no alterations of the NAD(P)H/NAD(P)+ ratio. PMID:24554722

  12. A nonparametric mixture model for cure rate estimation.

    Science.gov (United States)

    Peng, Y; Dear, K B

    2000-03-01

    Nonparametric methods have attracted less attention than their parametric counterparts for cure rate analysis. In this paper, we study a general nonparametric mixture model. The proportional hazards assumption is employed in modeling the effect of covariates on the failure time of patients who are not cured. The EM algorithm, the marginal likelihood approach, and multiple imputations are employed to estimate parameters of interest in the model. This model extends models and improves estimation methods proposed by other researchers. It also extends Cox's proportional hazards regression model by allowing a proportion of event-free patients and investigating covariate effects on that proportion. The model and its estimation method are investigated by simulations. An application to breast cancer data, including comparisons with previous analyses using a parametric model and an existing nonparametric model by other researchers, confirms the conclusions from the parametric model but not those from the existing nonparametric model.

  13. General Instructions for Disposable Respirators

    Centers for Disease Control (CDC) Podcasts

    2009-04-09

    This podcast, intended for the general public, demonstrates how to put on and take off disposable respirators that are to be used in areas affected by the influenza outbreak.  Created: 4/9/2009 by CDC, National Institute for Occupational Safety and Health (NIOSH).   Date Released: 4/29/2009.

  14. Use of Facemasks and Respirators

    Centers for Disease Control (CDC) Podcasts

    2007-05-15

    This program demonstrates the differences of facemasks and respirators that are to be used in public settings during an influenza pandemic.  Created: 5/15/2007 by CDC, National Institute for Occupational Safety and Health (NIOSH).   Date Released: 5/25/2007.

  15. Control of mitochondrial respiration

    NARCIS (Netherlands)

    Tager, J. M.; Wanders, R. J.; Groen, A. K.; Kunz, W.; Bohnensack, R.; Küster, U.; Letko, G.; Böhme, G.; Duszynski, J.; Wojtczak, L.

    1983-01-01

    The control theory of Kacser and Burns [in: Rate Control of Biological Processes (Davies, D.D. ed) pp. 65-104, Cambridge University Press, London, 1973] and Heinrich and Rapoport [Eur. J. Biochem. (1974) 42, 97-105] has been used to quantify the amount of control exerted by different steps on

  16. Micromechanical modeling of rate-dependent behavior of Connective tissues.

    Science.gov (United States)

    Fallah, A; Ahmadian, M T; Firozbakhsh, K; Aghdam, M M

    2017-03-07

    In this paper, a constitutive and micromechanical model for prediction of rate-dependent behavior of connective tissues (CTs) is presented. Connective tissues are considered as nonlinear viscoelastic material. The rate-dependent behavior of CTs is incorporated into model using the well-known quasi-linear viscoelasticity (QLV) theory. A planar wavy representative volume element (RVE) is considered based on the tissue microstructure histological evidences. The presented model parameters are identified based on the available experiments in the literature. The presented constitutive model introduced to ABAQUS by means of UMAT subroutine. Results show that, monotonic uniaxial test predictions of the presented model at different strain rates for rat tail tendon (RTT) and human patellar tendon (HPT) are in good agreement with experimental data. Results of incremental stress-relaxation test are also presented to investigate both instantaneous and viscoelastic behavior of connective tissues. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. A model of clearance rate regulation in mussels

    Science.gov (United States)

    Fréchette, Marcel

    2012-10-01

    Clearance rate regulation has been modelled as an instantaneous response to food availability, independent of the internal state of the animals. This view is incompatible with latent effects during ontogeny and phenotypic flexibility in clearance rate. Internal-state regulation of clearance rate is required to account for these patterns. Here I develop a model of internal-state based regulation of clearance rate. External factors such as suspended sediments are included in the model. To assess the relative merits of instantaneous regulation and internal-state regulation, I modelled blue mussel clearance rate and growth using a DEB model. In the usual standard feeding module, feeding is governed by a Holling's Type II response to food concentration. In the internal-state feeding module, gill ciliary activity and thus clearance rate are driven by internal reserve level. Factors such as suspended sediments were not included in the simulations. The two feeding modules were compared on the basis of their ability to capture the impact of latent effects, of environmental heterogeneity in food abundance and of physiological flexibility on clearance rate and individual growth. The Holling feeding module was unable to capture the effect of any of these sources of variability. In contrast, the internal-state feeding module did so without any modification or ad hoc calibration. Latent effects, however, appeared transient. With simple annual variability in temperature and food concentration, the relationship between clearance rate and food availability predicted by the internal-state feeding module was quite similar to that observed in Norwegian fjords. I conclude that in contrast with the usual Holling feeding module, internal-state regulation of clearance rate is consistent with well-documented growth and clearance rate patterns.

  18. Equivalence of interest rate models and lattice gases.

    Science.gov (United States)

    Pirjol, Dan

    2012-04-01

    We consider the class of short rate interest rate models for which the short rate is proportional to the exponential of a Gaussian Markov process x(t) in the terminal measure r(t)=a(t)exp[x(t)]. These models include the Black-Derman-Toy and Black-Karasinski models in the terminal measure. We show that such interest rate models are equivalent to lattice gases with attractive two-body interaction, V(t(1),t(2))=-Cov[x(t(1)),x(t(2))]. We consider in some detail the Black-Karasinski model with x(t) as an Ornstein-Uhlenbeck process, and show that it is similar to a lattice gas model considered by Kac and Helfand, with attractive long-range two-body interactions, V(x,y)=-α(e(-γ|x-y|)-e(-γ(x+y))). An explicit solution for the model is given as a sum over the states of the lattice gas, which is used to show that the model has a phase transition similar to that found previously in the Black-Derman-Toy model in the terminal measure.

  19. On rate-state and Coulomb failure models

    Science.gov (United States)

    Gomberg, J.; Beeler, N.; Blanpied, M.

    2000-01-01

    We examine the predictions of Coulomb failure stress and rate-state frictional models. We study the change in failure time (clock advance) Δt due to stress step perturbations (i.e., coseismic static stress increases) added to "background" stressing at a constant rate (i.e., tectonic loading) at time t0. The predictability of Δt implies a predictable change in seismicity rate r(t)/r0, testable using earthquake catalogs, where r0 is the constant rate resulting from tectonic stressing. Models of r(t)/r0, consistent with general properties of aftershock sequences, must predict an Omori law seismicity decay rate, a sequence duration that is less than a few percent of the mainshock cycle time and a return directly to the background rate. A Coulomb model requires that a fault remains locked during loading, that failure occur instantaneously, and that Δt is independent of t0. These characteristics imply an instantaneous infinite seismicity rate increase of zero duration. Numerical calculations of r(t)/r0 for different state evolution laws show that aftershocks occur on faults extremely close to failure at the mainshock origin time, that these faults must be "Coulomb-like," and that the slip evolution law can be precluded. Real aftershock population characteristics also may constrain rate-state constitutive parameters; a may be lower than laboratory values, the stiffness may be high, and/or normal stress may be lower than lithostatic. We also compare Coulomb and rate-state models theoretically. Rate-state model fault behavior becomes more Coulomb-like as constitutive parameter a decreases relative to parameter b. This is because the slip initially decelerates, representing an initial healing of fault contacts. The deceleration is more pronounced for smaller a, more closely simulating a locked fault. Even when the rate-state Δt has Coulomb characteristics, its magnitude may differ by some constant dependent on b. In this case, a rate-state model behaves like a modified

  20. Forest thinning and soil respiration in a ponderosa pine plantation in the Sierra Nevada.

    Science.gov (United States)

    Tang, Jianwu; Qi, Ye; Xu, Ming; Misson, Laurent; Goldstein, Allen H

    2005-01-01

    Soil respiration is controlled by soil temperature, soil water, fine roots, microbial activity, and soil physical and chemical properties. Forest thinning changes soil temperature, soil water content, and root density and activity, and thus changes soil respiration. We measured soil respiration monthly and soil temperature and volumetric soil water continuously in a young ponderosa pine (Pinus ponderosa Dougl. ex P. Laws. & C. Laws.) plantation in the Sierra Nevada Mountains in California from June 1998 to May 2000 (before a thinning that removed 30% of the biomass), and from May to December 2001 (after thinning). Thinning increased the spatial homogeneity of soil temperature and respiration. We conducted a multivariate analysis with two independent variables of soil temperature and water and a categorical variable representing the thinning event to simulate soil respiration and assess the effect of thinning. Thinning did not change the sensitivity of soil respiration to temperature or to water, but decreased total soil respiration by 13% at a given temperature and water content. This decrease in soil respiration was likely associated with the decrease in root density after thinning. With a model driven by continuous soil temperature and water time series, we estimated that total soil respiration was 948, 949 and 831 g C m(-2) year(-1) in the years 1999, 2000 and 2001, respectively. Although thinning reduced soil respiration at a given temperature and water content, because of natural climate variability and the thinning effect on soil temperature and water, actual cumulative soil respiration showed no clear trend following thinning. We conclude that the effect of forest thinning on soil respiration is the combined result of a decrease in root respiration, an increase in soil organic matter, and changes in soil temperature and water due to both thinning and interannual climate variability.

  1. Constraining the Q10 of respiration in water-limited environments

    Science.gov (United States)

    Collins, A.; Ryan, M. G.; Xu, C.; Grossiord, C.; Michaletz, S. T.; McDowell, N. G.

    2016-12-01

    If the current rate of greenhouse emissions remains constant over the next few decades, projections of climate change forecast increased atmospheric temperatures by a least 1.1°C by the end of the century. Warmer temperatures are expected to largely influence the exchange of energy, carbon and water between plants and the atmosphere. Several studies support that terrestrial ecosystems currently act as a major carbon sink, however warmer temperatures may amplify respiration processes and shift terrestrial ecosystems from a sink to a source of carbon in the future. Most Earth System Models incorporate the temperature dependence of plant respiration (Q10) to estimate and predict respiration processes and associated carbon fluxes. Using a temperature and precipitation manipulation experiment in natural conditions, we present evidence that this parameter is poorly constrained especially in water-limited environments. We discuss the utility of the Q10 framework and suggest improvements for this parameter along with trait-based approaches to better resolve models.

  2. Inflation, Exchange Rates and Interest Rates in Ghana: an Autoregressive Distributed Lag Model

    Directory of Open Access Journals (Sweden)

    Dennis Nchor

    2015-01-01

    Full Text Available This paper investigates the impact of exchange rate movement and the nominal interest rate on inflation in Ghana. It also looks at the presence of the Fisher Effect and the International Fisher Effect scenarios. It makes use of an autoregressive distributed lag model and an unrestricted error correction model. Ordinary Least Squares regression methods were also employed to determine the presence of the Fischer Effect and the International Fisher Effect. The results from the study show that in the short run a percentage point increase in the level of depreciation of the Ghana cedi leads to an increase in the rate of inflation by 0.20%. A percentage point increase in the level of nominal interest rates however results in a decrease in inflation by 0.98%. Inflation increases by 1.33% for every percentage point increase in the nominal interest rate in the long run. An increase in inflation on the other hand increases the nominal interest rate by 0.51% which demonstrates the partial Fisher effect. A 1% increase in the interest rate differential leads to a depreciation of the Ghana cedi by approximately 1% which indicates the full International Fisher effect.

  3. A Model of Exchange-Rate-Based Stabilization for Turkey

    OpenAIRE

    Ozlem Aytac

    2008-01-01

    The literature on the exchange-rate-based stabilization has focused almost exclusively in Latin America. Many other countries however, such as Egypt, Lebanon and Turkey; have undertaken this sort of programs in the last 10-15 years. I depart from the existing literature by developing a model specifically for the 2000-2001 heterodox exchange-rate-based stabilization program in Turkey: When the government lowers the rate of crawl, the rate of domestic credit creation is set equal to the lower r...

  4. Fine-root mortality rates in a temperate forest: Estimates using radiocarbon data and numerical modeling

    Energy Technology Data Exchange (ETDEWEB)

    Riley, W.J.; Gaudinski, J.B.; Torn, M.S.; Joslin, J.D.; Hanson, P.J.

    2009-09-01

    We used an inadvertent whole-ecosystem {sup 14}C label at a temperate forest in Oak Ridge, Tennessee, USA to develop a model (Radix1.0) of fine-root dynamics. Radix simulates two live-root pools, two dead-root pools, non-normally distributed root mortality turnover times, a stored carbon (C) pool, and seasonal growth and respiration patterns. We applied Radix to analyze measurements from two root size classes (< 0.5 and 0.5-2.0 mm diameter) and three soil-depth increments (O horizon, 0-15 cm and 30-60 cm). Predicted live-root turnover times were < 1 yr and 10 yr for short- and long-lived pools, respectively. Dead-root pools had decomposition turnover times of 2 yr and 10 yr. Realistic characterization of C flows through fine roots requires a model with two live fine-root populations, two dead fine-root pools, and root respiration. These are the first fine-root turnover time estimates that take into account respiration, storage, seasonal growth patterns, and non-normal turnover time distributions. The presence of a root population with decadal turnover times implies a lower amount of belowground net primary production used to grow fine-root tissue than is currently predicted by models with a single annual turnover pool.

  5. CELL RESPIRATION STUDIES

    Science.gov (United States)

    Daland, Geneva A.; Isaacs, Raphael

    1927-01-01

    1. The oxygen consumption of blood of normal individuals, when the hemoglobin is saturated with oxygen, is practically zero within the limits of experimental error of the microspirometer used. 2. The oxygen consumed in a microspirometer by the blood of patients with chronic myelogenous leucemia with a high white blood cell count, and of one with leucocytosis from sepsis, was proportional to the number of adult polymorphonuclear neutrophils in the blood. 3. No correlation could be made between the rate of oxygen absorption and the total number of white blood cells in the blood, or the total number of immature cells, or the number of red blood cells, or the amount of oxyhemoglobin. 4. The blood of patients with chronic myelogenous leucemia continued to use oxygen in the microspirometer longer than that of normal individuals, and the hemoglobin, in the leucemic bloods, became desaturated even though exposed to air. 5. In blood in which the bulk. of the cells were immature and the mature cells few, the oxygen consumption was lower than in blood in which the mature cells predominated. The rate of oxygen consumption of the immature cells was relatively low as compared to the mature. 6. The slower rate of oxygen absorption by the immature leucocytes in chronic myelogenous leucemia as compared to the mature cells, places them, in accord with Warburg's reports, in the class of the malignant tissues in this respect rather than in the group of young or embryonic cells. PMID:19869329

  6. Modeling baroreflex regulation of heart rate during orthostatic stress

    DEFF Research Database (Denmark)

    Olufsen, Mette; Tran, Hien T.; Ottesen, Johnny T.

    2006-01-01

    . The model uses blood pressure measured in the finger as an input to model heart rate dynamics in response to changes in baroreceptor nerve firing rate, sympathetic and parasympathetic responses, vestibulo-sympathetic reflex, and concentrations of norepinephrine and acetylcholine. We formulate an inverse...... in healthy and hypertensive elderly people the hysteresis loop shifts to higher blood pressure values and its area is diminished. Finally, for hypertensive elderly people the hysteresis loop is generally not closed indicating that during postural change from sitting to standing, the blood pressure resettles......During orthostatic stress, arterial and cardiopulmonary baroreflexes play a key role in maintaining arterial pressure by regulating heart rate. This study, presents a mathematical model that can predict the dynamics of heart rate regulation in response to postural change from sitting to standing...

  7. Video-based respiration monitoring with automatic region of interest detection

    NARCIS (Netherlands)

    Janssen, R.J.M.; Wang, Wenjin; Moço, A.; de Haan, G.

    2016-01-01

    Vital signs monitoring is ubiquitous in clinical environments and emerging in home-based healthcare applications. Still, since current monitoring methods require uncomfortable sensors, respiration rate remains the least measured vital sign. In this paper, we propose a video-based respiration

  8. Soil respiration is not limited by reductions in microbial biomass during long-term soil incubations

    Science.gov (United States)

    Declining rates of soil respiration are reliably observed during long-term laboratory incubations, but the cause is uncertain. We explored different controls on soil respiration during long-term soil incubations. Following a 707 day incubation (30 C) of soils from cultivated and forested plots at Ke...

  9. Soil CO2 concentration does not affect growth or root respiration in bean or citrus

    NARCIS (Netherlands)

    Bouma, T.J.; Nielsen, K.F.; Eissenstat, D.M.; Lynch, J.P.

    1997-01-01

    Contrasting effects of soil CO2 concentration on root respiration rates during short-term CO2 exposure, and on plant growth during long-term CO2 exposure, have been reported, Here we examine the effects of both short-and long-term exposure to soil CO2 on the root respiration of intact plants and on

  10. Penetration of asbestos fibers in respirator filters

    International Nuclear Information System (INIS)

    Cheng, Yung-Sung; Pearson, S.D.; Rohrbacher, K.D.; Yeh, Hsu-Chi.

    1994-01-01

    Currently, the health risks associated with asbestos have restricted its use and created a growing asbestos abatement industry with a need for respirator filters that are effective for worker protection. The main purpose of this project is to determine the influence of fiber size, electrostatic charge, and flow rate on the penetration of asbestos fibers in respirator filter cartridges. The study includes four types of filters each tested at two flow rates: the AO-R57A, a dual cartridge HEPA filter tested at 16 and 42.5 L/min; the MSA-S, a dust and mist filter tested at 16 and 42.5 L/min; the MSA-A power filter tested at 32 and 85 L/min; and the 3M-8710, a low-efficiency disposable face mask filter tested at 32 and 85 L/min. The three types of asbestos fibers used (amosite, crocidolite, and chrysotile) ranged in length from 0.04-0.5 μm and in aspect ratio (ratio of length to diameter) from 3 to 60. The fibers were used in both charged and neutralized forms. The results from amosite fibers are reported here

  11. 78 FR 18535 - Respirator Certification Fees

    Science.gov (United States)

    2013-03-27

    ... facepiece respirators. The North American respiratory protection market generated revenues around $1,830 million in 2007, the most recent data available.\\4\\ A summary of market segmentation, by respirator type... management. Of the U.S. respirator market of products approved by NIOSH, approximately 35 percent of approval...

  12. An Adjusted Discount Rate Model for Fuel Cycle Cost Estimation

    Energy Technology Data Exchange (ETDEWEB)

    Kim, S. K.; Kang, G. B.; Ko, W. I. [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2013-10-15

    Owing to the diverse nuclear fuel cycle options available, including direct disposal, it is necessary to select the optimum nuclear fuel cycles in consideration of the political and social environments as well as the technical stability and economic efficiency of each country. Economic efficiency is therefore one of the significant evaluation standards. In particular, because nuclear fuel cycle cost may vary in each country, and the estimated cost usually prevails over the real cost, when evaluating the economic efficiency, any existing uncertainty needs to be removed when possible to produce reliable cost information. Many countries still do not have reprocessing facilities, and no globally commercialized HLW (High-level waste) repository is available. A nuclear fuel cycle cost estimation model is therefore inevitably subject to uncertainty. This paper analyzes the uncertainty arising out of a nuclear fuel cycle cost evaluation from the viewpoint of a cost estimation model. Compared to the same discount rate model, the nuclear fuel cycle cost of a different discount rate model is reduced because the generation quantity as denominator in Equation has been discounted. Namely, if the discount rate reduces in the back-end process of the nuclear fuel cycle, the nuclear fuel cycle cost is also reduced. Further, it was found that the cost of the same discount rate model is overestimated compared with the different discount rate model as a whole.

  13. An Adjusted Discount Rate Model for Fuel Cycle Cost Estimation

    International Nuclear Information System (INIS)

    Kim, S. K.; Kang, G. B.; Ko, W. I.

    2013-01-01

    Owing to the diverse nuclear fuel cycle options available, including direct disposal, it is necessary to select the optimum nuclear fuel cycles in consideration of the political and social environments as well as the technical stability and economic efficiency of each country. Economic efficiency is therefore one of the significant evaluation standards. In particular, because nuclear fuel cycle cost may vary in each country, and the estimated cost usually prevails over the real cost, when evaluating the economic efficiency, any existing uncertainty needs to be removed when possible to produce reliable cost information. Many countries still do not have reprocessing facilities, and no globally commercialized HLW (High-level waste) repository is available. A nuclear fuel cycle cost estimation model is therefore inevitably subject to uncertainty. This paper analyzes the uncertainty arising out of a nuclear fuel cycle cost evaluation from the viewpoint of a cost estimation model. Compared to the same discount rate model, the nuclear fuel cycle cost of a different discount rate model is reduced because the generation quantity as denominator in Equation has been discounted. Namely, if the discount rate reduces in the back-end process of the nuclear fuel cycle, the nuclear fuel cycle cost is also reduced. Further, it was found that the cost of the same discount rate model is overestimated compared with the different discount rate model as a whole

  14. Dose rate modelled for the outdoors of a gamma irradiation

    International Nuclear Information System (INIS)

    Mangussi, J

    2012-01-01

    A model for the absorbed dose rate calculation on the surroundings of a gamma irradiation plant is developed. In such plants, a part of the radiation emitted upwards reach's the outdoors. The Compton scatterings on the wall of the exhausting pipes through de plant roof and on the outdoors air are modelled. The absorbed dose rate generated by the scattered radiation as far as 200 m is calculated. The results of the models, to be used for the irradiation plant design and for the environmental studies, are showed on graphics (author)

  15. Variable selection for mixture and promotion time cure rate models.

    Science.gov (United States)

    Masud, Abdullah; Tu, Wanzhu; Yu, Zhangsheng

    2016-11-16

    Failure-time data with cured patients are common in clinical studies. Data from these studies are typically analyzed with cure rate models. Variable selection methods have not been well developed for cure rate models. In this research, we propose two least absolute shrinkage and selection operators based methods, for variable selection in mixture and promotion time cure models with parametric or nonparametric baseline hazards. We conduct an extensive simulation study to assess the operating characteristics of the proposed methods. We illustrate the use of the methods using data from a study of childhood wheezing. © The Author(s) 2016.

  16. CONTINUOUS MODELING OF FOREIGN EXCHANGE RATE OF USD VERSUS TRY

    Directory of Open Access Journals (Sweden)

    Yakup Arı

    2011-01-01

    Full Text Available This study aims to construct continuous-time autoregressive (CAR model and continuous-time GARCH (COGARCH model from discrete time data of foreign exchange rate of United States Dollar (USD versus Turkish Lira (TRY. These processes are solutions to stochastic differential equation Lévy-driven processes. We have shown that CAR(1 and COGARCH(1,1 processes are proper models to represent foreign exchange rate of USD and TRY for different periods of time February 2002- June 2010.

  17. A Logistic Regression Based Auto Insurance Rate-Making Model Designed for the Insurance Rate Reform

    Directory of Open Access Journals (Sweden)

    Zhengmin Duan

    2018-02-01

    Full Text Available Using a generalized linear model to determine the claim frequency of auto insurance is a key ingredient in non-life insurance research. Among auto insurance rate-making models, there are very few considering auto types. Therefore, in this paper we are proposing a model that takes auto types into account by making an innovative use of the auto burden index. Based on this model and data from a Chinese insurance company, we built a clustering model that classifies auto insurance rates into three risk levels. The claim frequency and the claim costs are fitted to select a better loss distribution. Then the Logistic Regression model is employed to fit the claim frequency, with the auto burden index considered. Three key findings can be concluded from our study. First, more than 80% of the autos with an auto burden index of 20 or higher belong to the highest risk level. Secondly, the claim frequency is better fitted using the Poisson distribution, however the claim cost is better fitted using the Gamma distribution. Lastly, based on the AIC criterion, the claim frequency is more adequately represented by models that consider the auto burden index than those do not. It is believed that insurance policy recommendations that are based on Generalized linear models (GLM can benefit from our findings.

  18. Prediction of interest rate using CKLS model with stochastic parameters

    International Nuclear Information System (INIS)

    Ying, Khor Chia; Hin, Pooi Ah

    2014-01-01

    The Chan, Karolyi, Longstaff and Sanders (CKLS) model is a popular one-factor model for describing the spot interest rates. In this paper, the four parameters in the CKLS model are regarded as stochastic. The parameter vector φ (j) of four parameters at the (J+n)-th time point is estimated by the j-th window which is defined as the set consisting of the observed interest rates at the j′-th time point where j≤j′≤j+n. To model the variation of φ (j) , we assume that φ (j) depends on φ (j−m) , φ (j−m+1) ,…, φ (j−1) and the interest rate r j+n at the (j+n)-th time point via a four-dimensional conditional distribution which is derived from a [4(m+1)+1]-dimensional power-normal distribution. Treating the (j+n)-th time point as the present time point, we find a prediction interval for the future value r j+n+1 of the interest rate at the next time point when the value r j+n of the interest rate is given. From the above four-dimensional conditional distribution, we also find a prediction interval for the future interest rate r j+n+d at the next d-th (d≥2) time point. The prediction intervals based on the CKLS model with stochastic parameters are found to have better ability of covering the observed future interest rates when compared with those based on the model with fixed parameters

  19. Prediction of interest rate using CKLS model with stochastic parameters

    Energy Technology Data Exchange (ETDEWEB)

    Ying, Khor Chia [Faculty of Computing and Informatics, Multimedia University, Jalan Multimedia, 63100 Cyberjaya, Selangor (Malaysia); Hin, Pooi Ah [Sunway University Business School, No. 5, Jalan Universiti, Bandar Sunway, 47500 Subang Jaya, Selangor (Malaysia)

    2014-06-19

    The Chan, Karolyi, Longstaff and Sanders (CKLS) model is a popular one-factor model for describing the spot interest rates. In this paper, the four parameters in the CKLS model are regarded as stochastic. The parameter vector φ{sup (j)} of four parameters at the (J+n)-th time point is estimated by the j-th window which is defined as the set consisting of the observed interest rates at the j′-th time point where j≤j′≤j+n. To model the variation of φ{sup (j)}, we assume that φ{sup (j)} depends on φ{sup (j−m)}, φ{sup (j−m+1)},…, φ{sup (j−1)} and the interest rate r{sub j+n} at the (j+n)-th time point via a four-dimensional conditional distribution which is derived from a [4(m+1)+1]-dimensional power-normal distribution. Treating the (j+n)-th time point as the present time point, we find a prediction interval for the future value r{sub j+n+1} of the interest rate at the next time point when the value r{sub j+n} of the interest rate is given. From the above four-dimensional conditional distribution, we also find a prediction interval for the future interest rate r{sub j+n+d} at the next d-th (d≥2) time point. The prediction intervals based on the CKLS model with stochastic parameters are found to have better ability of covering the observed future interest rates when compared with those based on the model with fixed parameters.

  20. Contribution of bacterial respiration to plankton respiration from 50°N to 44°S in the Atlantic Ocean

    Science.gov (United States)

    García-Martín, E. E.; Aranguren-Gassis, M.; Hartmann, M.; Zubkov, M. V.; Serret, P.

    2017-11-01

    Marine bacteria play an important role in the global cycling of carbon and therefore in climate regulation. However, the paucity of direct measurements means that our understanding of the magnitude and variability of bacterial respiration in the ocean is poor. Estimations of respiration in the 0.2-0.8 μm size-fraction (considered as bacterial respiration), total plankton community respiration, and the contribution of bacterial respiration to total plankton community respiration were made along two latitudinal transects in the Atlantic Ocean (ca. 50°N-44°S) during 2010 and 2011. Two different methodologies were used: determination of changes in dissolved O2 concentration after standard 24 h dark bottle incubations, and measurements of in vivo reduction of 2-(ρ-iodophenyl)-3-(ρ-nitrophenyl)-5phenyl tetrazolium salt (INT). There was an overall significant correlation (r = 0.44, p community respiration estimated by both methods. Depth-integrated community respiration varied as much as threefold between regions. Maximum rates occurred in waters of the western European shelf and Patagonian shelf, and minimum rates in the North and South oligotrophic gyres. Depth-integrated bacterial respiration followed the same pattern as community respiration. There was a significantly higher cell-specific bacterial respiration in the northern subtropical gyre than in the southern subtropical gyre which suggests that bacterial carbon turnover is faster in the northern gyre. The relationships between plankton respiration and physicochemical and biological variables were different in different years. In general, INTT was correlated to both chlorophyll-a and bacterial abundance, while INT0.2-0.8 was only correlated with bacterial abundance. However, in 2010 INTT and INT0.2-0.8 were also correlated with temperature and primary production while in 2011 they were correlated with nitrate + nitrite concentration. The bacterial contribution to depth integrated community respiration was

  1. Effect of nitrogen on the seasonal course of growth and maintenance respiration in stems of Norway spruce trees.

    Science.gov (United States)

    Stockfors, Jan; Linder, Sune

    1998-03-01

    To determine effects of stem nitrogen concentration ([N]) on the seasonal course of respiration, rates of stem respiration of ten control and ten irrigated-fertilized (IL), 30-year-old Norway spruce trees (Picea abies (L.) Karst.), growing in northern Sweden, were measured on seven occasions from June 1993 to April 1994. To explore sources of seasonal variation and mechanisms of fertilization effects on respiration, we separated total respiration into growth and maintenance respiration for both xylem and phloem bark. Stem respiration increased in response to the IL treatment and was positively correlated with growth rate, volume of living cells and stem nitrogen content. However, no significant effect of IL treatment or [N] in the living cells was found for respiration per unit volume of live cells. Total stem respiration during the growing season (June to September) was estimated to be 16.7 and 29.7 mol CO(2) m(-2) for control and IL-treated trees, respectively. Respiration during the growing season accounted for approximately 64% of total annual respiration. Depending on the method, estimated growth respiration varied between 40 and 60% of total respiration during the growing season. Between 75 and 80% of the live cell volume in the stems was in the phloem, and phloem maintenance accounted for about 70% of maintenance respiration. Because most of the living cells were found in the phloem, and the living xylem cells were concentrated in the outer growth rings, we concluded that the best base for expressing rates of stem growth and maintenance respiration in young Norway spruce trees is stem surface area.

  2. Seasonality of temperate forest photosynthesis and daytime respiration.

    Science.gov (United States)

    Wehr, R; Munger, J W; McManus, J B; Nelson, D D; Zahniser, M S; Davidson, E A; Wofsy, S C; Saleska, S R

    2016-06-30

    Terrestrial ecosystems currently offset one-quarter of anthropogenic carbon dioxide (CO2) emissions because of a slight imbalance between global terrestrial photosynthesis and respiration. Understanding what controls these two biological fluxes is therefore crucial to predicting climate change. Yet there is no way of directly measuring the photosynthesis or daytime respiration of a whole ecosystem of interacting organisms; instead, these fluxes are generally inferred from measurements of net ecosystem-atmosphere CO2 exchange (NEE), in a way that is based on assumed ecosystem-scale responses to the environment. The consequent view of temperate deciduous forests (an important CO2 sink) is that, first, ecosystem respiration is greater during the day than at night; and second, ecosystem photosynthetic light-use efficiency peaks after leaf expansion in spring and then declines, presumably because of leaf ageing or water stress. This view has underlain the development of terrestrial biosphere models used in climate prediction and of remote sensing indices of global biosphere productivity. Here, we use new isotopic instrumentation to determine ecosystem photosynthesis and daytime respiration in a temperate deciduous forest over a three-year period. We find that ecosystem respiration is lower during the day than at night-the first robust evidence of the inhibition of leaf respiration by light at the ecosystem scale. Because they do not capture this effect, standard approaches overestimate ecosystem photosynthesis and daytime respiration in the first half of the growing season at our site, and inaccurately portray ecosystem photosynthetic light-use efficiency. These findings revise our understanding of forest-atmosphere carbon exchange, and provide a basis for investigating how leaf-level physiological dynamics manifest at the canopy scale in other ecosystems.

  3. The effect of facial expressions on respirators contact pressures.

    Science.gov (United States)

    Cai, Mang; Shen, Shengnan; Li, Hui

    2017-08-01

    This study investigated the effect of four typical facial expressions (calmness, happiness, sadness and surprise) on contact characteristics between an N95 filtering facepiece respirator and a headform. The respirator model comprised two layers (an inner layer and an outer layer) and a nose clip. The headform model was comprised of a skin layer, a fatty tissue layer embedded with eight muscles, and a skull layer. Four typical facial expressions were generated by the coordinated contraction of four facial muscles. After that, the distribution of the contact pressure on the headform, as well as the contact area, were calculated. Results demonstrated that the nasal clip could help make the respirator move closer to the nose bridge while causing facial discomfort. Moreover, contact areas varied with different facial expressions, and facial expressions significantly altered contact pressures at different key areas, which may result in leakage.

  4. ECONOMETRIC APPROACH TO DIFFERENCE EQUATIONS MODELING OF EXCHANGE RATES CHANGES

    Directory of Open Access Journals (Sweden)

    Josip Arnerić

    2010-12-01

    Full Text Available Time series models that are commonly used in econometric modeling are autoregressive stochastic linear models (AR and models of moving averages (MA. Mentioned models by their structure are actually stochastic difference equations. Therefore, the objective of this paper is to estimate difference equations containing stochastic (random component. Estimated models of time series will be used to forecast observed data in the future. Namely, solutions of difference equations are closely related to conditions of stationary time series models. Based on the fact that volatility is time varying in high frequency data and that periods of high volatility tend to cluster, the most successful and popular models in modeling time varying volatility are GARCH type models and their variants. However, GARCH models will not be analyzed because the purpose of this research is to predict the value of the exchange rate in the levels within conditional mean equation and to determine whether the observed variable has a stable or explosive time path. Based on the estimated difference equation it will be examined whether Croatia is implementing a stable policy of exchange rates.

  5. Temperature response of soil respiration largely unaltered with experimental warming

    NARCIS (Netherlands)

    Carey, J.C.; Tang, J.; Templer, P.H.; Kroeger, K.D.; Crowther, T.W.; Burton, A.J.; Dukes, J.S.; Emmett, B.; Frey, S.D.; Heskel, M.A.; Jiang, L.; Machmuller, M.B.; Mohan, J.; Panetta, A.M.; Reich, P.B.; Reinsch, S.; Wang, X.; Allison, S.D.; Bamminger, C.; Bridgham, S.; Collins, S.L.; de Dato, G.; Eddy, W.C.; Enquist, B.J.; Estiarte, M.; Harte, J.; Henderson, A.; Johnson, B.R.; Larsen, K.S.; Luo, Y.; Marhan, S.; Melillo, J.M.; Peñuelas, J.; Pfeifer-Meister, L.; Poll, C.; Rastetter, E.; Reinmann, A.B.; Reynolds, L.L.; Schmidt, I.K.; Shaver, G.R.; Strong, A.L.; Suseela, V.; Tietema, A.

    2016-01-01

    The respiratory release of carbon dioxide (CO2) from soil is a major yet poorly understood flux in the global carbon cycle. Climatic warming is hypothesized to increase rates of soil respiration, potentially fueling further increases in global temperatures. However, despite considerable scientific

  6. Hydrological controls on heterotrophic soil respiration across an agricultural landscape

    Science.gov (United States)

    Water availability is an important determinant of variation in soil respiration, but a consistent relationship between soil water and the relative flux rate of carbon dioxide across different soil types remains elusive. Using large undisturbed soil columns (N = 12), we evaluated soil water controls...

  7. A model for reaction rates in turbulent reacting flows

    Science.gov (United States)

    Chinitz, W.; Evans, J. S.

    1984-01-01

    To account for the turbulent temperature and species-concentration fluctuations, a model is presented on the effects of chemical reaction rates in computer analyses of turbulent reacting flows. The model results in two parameters which multiply the terms in the reaction-rate equations. For these two parameters, graphs are presented as functions of the mean values and intensity of the turbulent fluctuations of the temperature and species concentrations. These graphs will facilitate incorporation of the model into existing computer programs which describe turbulent reacting flows. When the model was used in a two-dimensional parabolic-flow computer code to predict the behavior of an experimental, supersonic hydrogen jet burning in air, some improvement in agreement with the experimental data was obtained in the far field in the region near the jet centerline. Recommendations are included for further improvement of the model and for additional comparisons with experimental data.

  8. A method for measuring losses of soil carbon by heterotrophic respiration from peat soils under oil palms

    Science.gov (United States)

    Farmer, Jenny; Manning, Frances; Smith, Jo; Arn Teh, Yit

    2017-04-01

    The effects of drainage and deforestation of South East Asian peat swamp forests for the development of oil palm plantations has received considerable attention in both mainstream media and academia, and is the source of significant discussion and debate. However, data on the long-term carbon losses from these peat soils as a result of this land use change is still limited and the methods with which to collect this data are still developing. Here we present the ongoing evolution and implementation of a method for separating autotrophic and heterotrophic respiration by sampling carbon dioxide emissions at increasing distance from palm trees. We present the limitations of the method, modelling approaches and results from our studies. In 2011 we trialled this method in Sumatra, Indonesia and collected rate measurements over a six day period in three ages of oil palm. In the four year oil palm site there were thirteen collars that had no roots present and from these the peat based carbon losses were recorded to be 0.44 g CO2 m2 hr-1 [0.34; 0.57] (equivalent to 39 t CO2 ha-1 yr-1 [30; 50]) with a mean water table depth of 0.40 m, or 63% of the measured total respiration across the plot. In the two older palm sites of six and seven years, only one collar out of 100 had no roots present, and thus a linear random effects model was developed to calculate heterotrophic emissions for different distances from the palm tree. This model suggested that heterotrophic respiration was between 37 - 59% of total respiration in the six year old plantation and 39 - 56% in the seven year old plantation. We applied this method in 2014 to a seven year old plantation, in Sarawak, Malaysia, modifying the method to include the heterotrophic contribution from beneath frond piles and weed covered areas. These results indicated peat based carbon losses to be 0.42 g CO2 m2 hr-1 [0.27;0.59] (equivalent to 37 t CO2 ha-1 yr-1 [24; 52]) at an average water table depth of 0.35 m, 47% of the measured

  9. Modeling decay rates of dead wood in a neotropical forest.

    Science.gov (United States)

    Hérault, Bruno; Beauchêne, Jacques; Muller, Félix; Wagner, Fabien; Baraloto, Christopher; Blanc, Lilian; Martin, Jean-Michel

    2010-09-01

    Variation of dead wood decay rates among tropical trees remains one source of uncertainty in global models of the carbon cycle. Taking advantage of a broad forest plot network surveyed for tree mortality over a 23-year period, we measured the remaining fraction of boles from 367 dead trees from 26 neotropical species widely varying in wood density (0.23-1.24 g cm(-3)) and tree circumference at death time (31.5-272.0 cm). We modeled decay rates within a Bayesian framework assuming a first order differential equation to model the decomposition process and tested for the effects of forest management (selective logging vs. unexploited), of mode of death (standing vs. downed) and of topographical levels (bottomlands vs. hillsides vs. hilltops) on wood decay rates. The general decay model predicts the observed remaining fraction of dead wood (R2 = 60%) with only two biological predictors: tree circumference at death time and wood specific density. Neither selective logging nor local topography had a differential effect on wood decay rates. Including the mode of death into the model revealed that standing dead trees decomposed faster than downed dead trees, but the gain of model accuracy remains rather marginal. Overall, these results suggest that the release of carbon from tropical dead trees to the atmosphere can be simply estimated using tree circumference at death time and wood density.

  10. Modeling the intracellular pathogen-immune interaction with cure rate

    Science.gov (United States)

    Dubey, Balram; Dubey, Preeti; Dubey, Uma S.

    2016-09-01

    Many common and emergent infectious diseases like Influenza, SARS, Hepatitis, Ebola etc. are caused by viral pathogens. These infections can be controlled or prevented by understanding the dynamics of pathogen-immune interaction in vivo. In this paper, interaction of pathogens with uninfected and infected cells in presence or absence of immune response are considered in four different cases. In the first case, the model considers the saturated nonlinear infection rate and linear cure rate without absorption of pathogens into uninfected cells and without immune response. The next model considers the effect of absorption of pathogens into uninfected cells while all other terms are same as in the first case. The third model incorporates innate immune response, humoral immune response and Cytotoxic T lymphocytes (CTL) mediated immune response with cure rate and without absorption of pathogens into uninfected cells. The last model is an extension of the third model in which the effect of absorption of pathogens into uninfected cells has been considered. Positivity and boundedness of solutions are established to ensure the well-posedness of the problem. It has been found that all the four models have two equilibria, namely, pathogen-free equilibrium point and pathogen-present equilibrium point. In each case, stability analysis of each equilibrium point is investigated. Pathogen-free equilibrium is globally asymptotically stable when basic reproduction number is less or equal to unity. This implies that control or prevention of infection is independent of initial concentration of uninfected cells, infected cells, pathogens and immune responses in the body. The proposed models show that introduction of immune response and cure rate strongly affects the stability behavior of the system. Further, on computing basic reproduction number, it has been found to be minimum for the fourth model vis-a-vis other models. The analytical findings of each model have been exemplified by

  11. Effect of Simvastatin, Coenzyme Q10, Resveratrol, Acetylcysteine and Acetylcarnitine on Mitochondrial Respiration.

    Science.gov (United States)

    Fišar, Z; Hroudová, J; Singh, N; Kopřivová, A; Macečková, D

    2016-01-01

    Some therapeutic and/or adverse effects of drugs may be related to their effects on mitochondrial function. The effects of simvastatin, resveratrol, coenzyme Q10, acetylcysteine, and acetylcarnitine on Complex I-, Complex II-, or Complex IV-linked respiratory rate were determined in isolated brain mitochondria. The protective effects of these biologically active compounds on the calcium-induced decrease of the respiratory rate were also studied. We observed a significant inhibitory effect of simvastatin on mitochondrial respiration (IC50 = 24.0 μM for Complex I-linked respiration, IC50 = 31.3 μM for Complex II-linked respiration, and IC50 = 42.9 μM for Complex IV-linked respiration); the inhibitory effect of resveratrol was found at very high concentrations (IC50 = 162 μM for Complex I-linked respiration, IC50 = 564 μM for Complex II-linked respiration, and IC50 = 1454 μM for Complex IV-linked respiration). Concentrations required for effective simvastatin- or resveratrol-induced inhibition of mitochondrial respiration were found much higher than concentrations achieved under standard dosing of these drugs. Acetylcysteine and acetylcarnitine did not affect the oxygen consumption rate of mitochondria. Coenzyme Q10 induced an increase of Complex I-linked respiration. The increase of free calcium ions induced partial inhibition of the Complex I+II-linked mitochondrial respiration, and all tested drugs counteracted this inhibition. None of the tested drugs showed mitochondrial toxicity (characterized by respiratory rate inhibition) at drug concentrations achieved at therapeutic drug intake. Resveratrol, simvastatin, and acetylcarnitine had the greatest neuroprotective potential (characterized by protective effects against calcium-induced reduction of the respiratory rate).

  12. Modelling of behaviour of metals at high strain rates

    OpenAIRE

    Panov, Vili

    2006-01-01

    The aim of the work presented in this thesis was to produce the improvement of the existing simulation tools used for the analysis of materials and structures, which are dynamically loaded and subjected to the different levels of temperatures and strain rates. The main objective of this work was development of tools for modelling of strain rate and temperature dependant behaviour of aluminium alloys, typical for aerospace structures with pronounced orthotropic properties, and their implementa...

  13. Do expert ratings or economic models explain champagne prices?

    DEFF Research Database (Denmark)

    Bentzen, Jan Børsen; Smith, Valdemar

    2008-01-01

    Champagne is bought with low frequency and many consumers most likely do not have or seek full information on the quality of champagne. Some consumers may rely on the reputation of particular brands, e.g. "Les Grandes Marques", some consumers choose to gain information from sensory ratings...... of champagne. The aim of this paper is to analyse the champagne prices on the Scandinavian markets by applying a hedonic price function in a comparative framework with minimal models using sensory ratings....

  14. SU-E-J-67: Evaluation of Breathing Patterns for Respiratory-Gated Radiation Therapy Using Respiration Regularity Index

    International Nuclear Information System (INIS)

    Cheong, K; Lee, M; Kang, S; Yoon, J; Park, S; Hwang, T; Kim, H; Kim, K; Han, T; Bae, H

    2014-01-01

    Purpose: Despite the importance of accurately estimating the respiration regularity of a patient in motion compensation treatment, an effective and simply applicable method has rarely been reported. The authors propose a simple respiration regularity index based on parameters derived from a correspondingly simplified respiration model. Methods: In order to simplify a patient's breathing pattern while preserving the data's intrinsic properties, we defined a respiration model as a power of cosine form with a baseline drift. According to this respiration formula, breathing-pattern fluctuation could be explained using four factors: sample standard deviation of respiration period, sample standard deviation of amplitude and the results of simple regression of the baseline drift (slope and standard deviation of residuals of a respiration signal. Overall irregularity (δ) was defined as a Euclidean norm of newly derived variable using principal component analysis (PCA) for the four fluctuation parameters. Finally, the proposed respiration regularity index was defined as ρ=ln(1+(1/ δ))/2, a higher ρ indicating a more regular breathing pattern. Subsequently, we applied it to simulated and clinical respiration signals from real-time position management (RPM; Varian Medical Systems, Palo Alto, CA) and investigated respiration regularity. Moreover, correlations between the regularity of the first session and the remaining fractions were investigated using Pearson's correlation coefficient. Results: The respiration regularity was determined based on ρ; patients with ρ 0.7 was suitable for respiratory-gated radiation therapy (RGRT). Fluctuations in breathing cycle and amplitude were especially determinative of ρ. If the respiration regularity of a patient's first session was known, it could be estimated through subsequent sessions. Conclusions: Respiration regularity could be objectively determined using a respiration regularity index, ρ. Such single-index testing of

  15. The diel imprint of leaf metabolism on the δ13 C signal of soil respiration under control and drought conditions.

    Science.gov (United States)

    Barthel, Matthias; Hammerle, Albin; Sturm, Patrick; Baur, Thomas; Gentsch, Lydia; Knohl, Alexander

    2011-12-01

    Recent (13) CO(2) canopy pulse chase labeling studies revealed that photosynthesis influences the carbon isotopic composition of soil respired CO(2) (δ(13) C(SR)) even on a diel timescale. However, the driving mechanisms underlying these short-term responses remain unclear, in particular under drought conditions. The gas exchange of CO(2) isotopes of canopy and soil was monitored in drought/nondrought-stressed beech (Fagus sylvatica) saplings after (13) CO(2) canopy pulse labeling. A combined canopy/soil chamber system with gas-tight separated soil and canopy compartments was coupled to a laser spectrometer measuring mixing ratios and isotopic composition of CO(2) in air at high temporal resolution. The measured δ(13) C(SR) signal was then explained and substantiated by a mechanistic carbon allocation model. Leaf metabolism had a strong imprint on diel cycles in control plants, as a result of an alternating substrate supply switching between sugar and transient starch. By contrast, diel cycles in drought-stressed plants were determined by the relative contributions of autotrophic and heterotrophic respiration throughout the day. Drought reduced the speed of the link between photosynthesis and soil respiration by a factor of c. 2.5, depending on the photosynthetic rate. Drought slows the coupling between photosynthesis and soil respiration and alters the underlying mechanism causing diel variations of δ(13) C(SR). © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

  16. Action of γ-rays on the respiration and growth of perilla

    International Nuclear Information System (INIS)

    Sergeeva, E.A.

    1976-01-01

    The respiration rate of leaves of different stroyes and the growth rate of the main steam of perilla plants have been studied after irradiation with γ-rays (3 and 6 kR). Three periods have been distinguished in the rate of the processes under study. The growth and respiration were inhibited in the initial post-irradiation period, then their rate increased till it exceeded the control values at the end of the restoration period. During the subsequent third period, the rate of growth and respiration processes decreased reaching the values observed in unirradiated plants. Changes in the radiosensitive process of growth of irradiated plants are suggested to be the cause for changes in the respiration rate

  17. An Econometric Diffusion Model of Exchange Rate Movements within a Band - Implications for Interest Rate Differential and Credibility of Exchange Rate Policy

    OpenAIRE

    Rantala, Olavi

    1992-01-01

    The paper presents a model ofexchange rate movements within a specified exchange rate band enforced by central bank interventions. The model is based on the empirical observation that the exchange rate has usually been strictly inside the band, at least in Finland. In this model the distribution of the exchange rate is truncated lognormal from the edges towards the center of the band and hence quite different from the bimodal distribution of the standard target zone model. The model is estima...

  18. Forecast model of safety economy contribution rate of China

    Institute of Scientific and Technical Information of China (English)

    LIU Li-jun; SHI Shi-liang

    2005-01-01

    It is the rational and exact computation of the safety economy contribution rate that has the far-reaching realistic meaning to the improvement of society cognition to safety and the investment to the nation safety and the national macro-safety decision-makings. The accurate function between safety inputs and outputs was obtained through a founded econometric model. Then the forecasted safety economy contribution rate is 3.01% and the forecasted ratio between safety inputs and outputs is 1:1.81 in China in 2005. And the model accords with the practice of China and the results are satisfying.

  19. Pipe fracture evaluations for leak-rate detection: Probabilistic models

    International Nuclear Information System (INIS)

    Rahman, S.; Wilkowski, G.; Ghadiali, N.

    1993-01-01

    This is the second in series of three papers generated from studies on nuclear pipe fracture evaluations for leak-rate detection. This paper focuses on the development of novel probabilistic models for stochastic performance evaluation of degraded nuclear piping systems. It was accomplished here in three distinct stages. First, a statistical analysis was conducted to characterize various input variables for thermo-hydraulic analysis and elastic-plastic fracture mechanics, such as material properties of pipe, crack morphology variables, and location of cracks found in nuclear piping. Second, a new stochastic model was developed to evaluate performance of degraded piping systems. It is based on accurate deterministic models for thermo-hydraulic and fracture mechanics analyses described in the first paper, statistical characterization of various input variables, and state-of-the-art methods of modem structural reliability theory. From this model. the conditional probability of failure as a function of leak-rate detection capability of the piping systems can be predicted. Third, a numerical example was presented to illustrate the proposed model for piping reliability analyses. Results clearly showed that the model provides satisfactory estimates of conditional failure probability with much less computational effort when compared with those obtained from Monte Carlo simulation. The probabilistic model developed in this paper will be applied to various piping in boiling water reactor and pressurized water reactor plants for leak-rate detection applications

  20. Soil fauna communities and microbial respiration in high Arctic tundra soils at Zackenberg, Northeast Greenland

    DEFF Research Database (Denmark)

    Sørensen, Louise I.; Holmstrup, Martin; Maraldo, Kristine

    2006-01-01

    The soil fauna communities were described for three dominant vegetation types in a high arctic site at Zackenberg, Northeast Greenland. Soil samples were extracted to quantify the densities of mites, collembolans, enchytraeids, diptera larvae, nematodes and protozoa. Rates of microbial respiration...... densities (naked amoeba and heterotrophic flagellates) were equal. Respiration rate of unamended soil was similar in soil from the three plots. However, a higher respiration rate increase in carbon + nutrient amended soil and the higher densities of soil fauna (with the exception of mites and protozoa...

  1. Fatty acid nitroalkenes induce resistance to ischemic cardiac injury by modulating mitochondrial respiration at complex II

    Directory of Open Access Journals (Sweden)

    Jeffrey R. Koenitzer

    2016-08-01

    Full Text Available Nitro-fatty acids (NO2-FA are metabolic and inflammatory-derived electrophiles that mediate pleiotropic signaling actions. It was hypothesized that NO2-FA would impact mitochondrial redox reactions to induce tissue-protective metabolic shifts in cells. Nitro-oleic acid (OA-NO2 reversibly inhibited complex II-linked respiration in isolated rat heart mitochondria in a pH-dependent manner and suppressed superoxide formation. Nitroalkylation of Fp subunit was determined by BME capture and the site of modification by OA-NO2 defined by mass spectrometric analysis. These effects translated into reduced basal and maximal respiration and favored glycolytic metabolism in H9C2 cardiomyoblasts as assessed by extracellular H+ and O2 flux analysis. The perfusion of NO2-FA induced acute cardioprotection in an isolated perfused heart ischemia/reperfusion (IR model as evidenced by significantly higher rate-pressure products. Together these findings indicate that NO2-FA can promote cardioprotection by inducing a shift from respiration to glycolysis and suppressing reactive species formation in the post-ischemic interval.

  2. Insulin resistance in HIV-infected youth is associated with decreased mitochondrial respiration.

    Science.gov (United States)

    Takemoto, Jody K; Miller, Tracie L; Wang, Jiajia; Jacobson, Denise L; Geffner, Mitchell E; Van Dyke, Russell B; Gerschenson, Mariana

    2017-01-02

    To identify relationships between insulin resistance (IR) and mitochondrial respiration in perinatally HIV-infected youth. Case-control study. Mitochondrial respiration was assessed in perinatally HIV-infected youth in Tanner stages 2-5, 25 youth with IR (IR+) and 50 without IR (IR-) who were enrolled in the Pediatric HIV/AIDS Cohort Study. IR was defined as a homeostatic model of assessment for IR value at least 4.0. A novel, high-throughput oximetry method was used to evaluate cellular respiration in peripheral blood mononuclear cells. Unadjusted and adjusted differences in mitochondrial respiration markers between IR+ and IR- were evaluated, as were correlations between mitochondrial respiration markers and biochemical measurements. IR+ and IR- youth were similar on age, sex, and race/ethnicity. Mean age was 16.5 and 15.6 years in IR+ and IR-, respectively. The IR+ group had significantly higher mean BMI and metabolic analytes (fasting glucose, insulin, cholesterol, triglycerides, and venous lactate and pyruvate) compared with the IR-. Mitochondrial respiration markers were, on average, lower in the IR+ compared with IR-, including basal respiration (417.5 vs. 597.5 pmol, P = 0.074), ATP production (11 513 vs. 15 202 pmol, P = 0.078), proton leak (584.6 vs. 790.0 pmol, P = 0.033), maximal respiration (1815 vs. 2399 pmol, P = 0.025), and spare respiration capacity (1162 vs. 2017 pmol, P = 0.032). Nonmitochondrial respiration did not differ by IR status. The results did not change when adjusted for age. HIV-infected youth with IR have lower mitochondrial respiration markers when compared to youth without IR. Disordered mitochondrial respiration may be a potential mechanism for IR in this population.

  3. Temperature and substrate controls on intra-annual variation in ecosystem respiration in two subarctic vegetation types

    DEFF Research Database (Denmark)

    Grogan, Paul; Jonasson, Sven Evert

    2005-01-01

    significantly to ecosystem respiration during most phases of winter and summer in the two vegetation types. Ecosystem respiration rates through the year did not differ significantly between vegetation types despite substantial differences in biomass pools, soil depth and temperature regime. Most (76...... contributions of bulk soil organic matter and plant-associated carbon pools to ecosystem respiration is critical to predicting the response of arctic ecosystem net carbon balance to climate change. In this study, we determined the variation in ecosystem respiration rates from birch forest understory and heath......-92%) of the intra-annual variation in ecosystem respiration rates from these two common mesic subarctic ecosystems was explained using a first-order exponential equation relating respiration to substrate chemical quality and soil temperature. Removal of plants and their current year's litter significantly reduced...

  4. Changes in photosynthesis and soil moisture drive the seasonal soil respiration-temperature hysteresis relationship

    Science.gov (United States)

    In nearly all large-scale models, CO2 efflux from soil (i.e., soil respiration) is represented as a function of soil temperature. However, the relationship between soil respiration and soil temperature is highly variable at the local scale, and there is often a pronounced hysteresis in the soil resp...

  5. Cardiac, skeletal, and smooth muscle mitochondrial respiration: are all mitochondria created equal?

    Science.gov (United States)

    Park, Song-Young; Gifford, Jayson R; Andtbacka, Robert H I; Trinity, Joel D; Hyngstrom, John R; Garten, Ryan S; Diakos, Nikolaos A; Ives, Stephen J; Dela, Flemming; Larsen, Steen; Drakos, Stavros; Richardson, Russell S

    2014-08-01

    Unlike cardiac and skeletal muscle, little is known about vascular smooth muscle mitochondrial respiration. Therefore, the present study examined mitochondrial respiratory rates in smooth muscle of healthy human feed arteries and compared with that of healthy cardiac and skeletal muscles. Cardiac, skeletal, and smooth muscles were harvested from a total of 22 subjects (53 ± 6 yr), and mitochondrial respiration was assessed in permeabilized fibers. Complex I + II, state 3 respiration, an index of oxidative phosphorylation capacity, fell progressively from cardiac to skeletal to smooth muscles (54 ± 1, 39 ± 4, and 15 ± 1 pmol·s(-1)·mg(-1), P respiration rates were normalized by CS (respiration per mitochondrial content), oxidative phosphorylation capacity was no longer different between the three muscle types. Interestingly, complex I state 2 normalized for CS activity, an index of nonphosphorylating respiration per mitochondrial content, increased progressively from cardiac to skeletal to smooth muscles, such that the respiratory control ratio, state 3/state 2 respiration, fell progressively from cardiac to skeletal to smooth muscles (5.3 ± 0.7, 3.2 ± 0.4, and 1.6 ± 0.3 pmol·s(-1)·mg(-1), P respiration highlight the existence of intrinsic functional differences between these muscle mitochondria. This likely influences the efficiency of oxidative phosphorylation and could potentially alter ROS production.

  6. Strain Rate Dependant Material Model for Orthotropic Metals

    International Nuclear Information System (INIS)

    Vignjevic, Rade

    2016-01-01

    In manufacturing processes anisotropic metals are often exposed to the loading with high strain rates in the range from 10"2 s"-"1 to 10"6 s"-"1 (e.g. stamping, cold spraying and explosive forming). These types of loading often involve generation and propagation of shock waves within the material. The material behaviour under such a complex loading needs to be accurately modelled, in order to optimise the manufacturing process and achieve appropriate properties of the manufactured component. The presented research is related to development and validation of a thermodynamically consistent physically based constitutive model for metals under high rate loading. The model is capable of modelling damage, failure and formation and propagation of shock waves in anisotropic metals. The model has two main parts: the strength part which defines the material response to shear deformation and an equation of state (EOS) which defines the material response to isotropic volumetric deformation [1]. The constitutive model was implemented into the transient nonlinear finite element code DYNA3D [2] and our in house SPH code. Limited model validation was performed by simulating a number of high velocity material characterisation and validation impact tests. The new damage model was developed in the framework of configurational continuum mechanics and irreversible thermodynamics with internal state variables. The use of the multiplicative decomposition of deformation gradient makes the model applicable to arbitrary plastic and damage deformations. To account for the physical mechanisms of failure, the concept of thermally activated damage initially proposed by Tuller and Bucher [3], Klepaczko [4] was adopted as the basis for the new damage evolution model. This makes the proposed damage/failure model compatible with the Mechanical Threshold Strength (MTS) model Follansbee and Kocks [5], 1988; Chen and Gray [6] which was used to control evolution of flow stress during plastic

  7. Vapor generation rate model for dispersed drop flow

    International Nuclear Information System (INIS)

    Unal, C.; Tuzla, K.; Cokmez-Tuzla, A.F.; Chen, J.C.

    1991-01-01

    A comparison of predictions of existing nonequilibrium post-CHF heat transfer models with the recently obtained rod bundle data has been performed. The models used the experimental conditions and wall temperatures to predict the heat flux and vapor temperatures at the location of interest. No existing model was able to reasonably predict the vapor superheat and the wall heat flux simultaneously. Most of the models, except Chen-Sundaram-Ozkaynak, failed to predict the wall heat flux, while all of the models could not predict the vapor superheat data or trends. A recently developed two-region heat transfer model, the Webb-Chen two-region model, did not give a reasonable prediction of the vapor generation rate in the far field of the CHF point. A new correlation was formulated to predict the vapor generation rate in convective dispersed droplet flow in terms of thermal-hydraulic parameters and thermodynamic properties. A comparison of predictions of the two-region heat transfer model, with the use of a presently developed correlation, with all the existing post-CHF data, including single-tube and rod bundle, showed significant improvements in predicting the vapor superheat and tube wall heat flux trends. (orig.)

  8. Level-ARCH Short Rate Models with Regime Switching

    DEFF Research Database (Denmark)

    Christiansen, Charlotte

    This paper introduces regime switching volatility into level- ARCH models for the short rates of the US, the UK, and Germany. Once regime switching and level effects are included there are no gains from including ARCH effects. It is of secondary importance exactly how the regime switching is spec...

  9. Empirical Model for Predicting Rate of Biogas Production | Adamu ...

    African Journals Online (AJOL)

    Rate of biogas production using cow manure as substrate was monitored in two laboratory scale batch reactors (13 liter and 108 liter capacities). Two empirical models based on the Gompertz and the modified logistic equations were used to fit the experimental data based on non-linear regression analysis using Solver tool ...

  10. Modeling sludge accumulation rates in lined pit latrines in slum ...

    African Journals Online (AJOL)

    Yvonne

    should include geo-physical characterization of soil and drainage of pit latrine sites so as ... Key words: Faecal, sludge accumulation rates, slum areas, lined pit latrines. .... Value and its unit Source .... overall quality of the models had to be assessed by validation on ..... Sanitation partnership series: Bringing pit emptying out.

  11. Light-enhanced oxygen respiration in benthic phototrophic communities

    DEFF Research Database (Denmark)

    Epping, EHG; Jørgensen, BB

    1996-01-01

    Two microelectrode studies demonstrate the effect of Light intensity and photosynthesis on areal oxygen respiration in a hypersaline mat at Guerrero Negro, Mexico, and in an intertidal sediment at Texel, The Netherlands. The hypersaline mat was studied in the laboratory at light intensities of 0...... the day at prevailing light intensities. A 1-dimensional diffusion-reaction model was used to estimate gross photosynthesis and oxygen respiration per volume of sediment, as well as the euphotic depth and the sediment-water interface concentration of oxygen. Areal gross photosynthesis ranged from 9...

  12. The diabetes medication Canagliflozin reduces cancer cell proliferation by inhibiting mitochondrial complex-I supported respiration

    Directory of Open Access Journals (Sweden)

    Linda A. Villani

    2016-10-01

    Full Text Available Objective: The sodium-glucose transporter 2 (SGLT2 inhibitors Canagliflozin and Dapagliflozin are recently approved medications for type 2 diabetes. Recent studies indicate that SGLT2 inhibitors may inhibit the growth of some cancer cells but the mechanism(s remain unclear. Methods: Cellular proliferation and clonogenic survival were used to assess the sensitivity of prostate and lung cancer cell growth to the SGLT2 inhibitors. Oxygen consumption, extracellular acidification rate, cellular ATP, glucose uptake, lipogenesis, and phosphorylation of AMP-activated protein kinase (AMPK, acetyl-CoA carboxylase, and the p70S6 kinase were assessed. Overexpression of a protein that maintains complex-I supported mitochondrial respiration (NDI1 was used to establish the importance of this pathway for mediating the anti-proliferative effects of Canagliflozin. Results: Clinically achievable concentrations of Canagliflozin, but not Dapagliflozin, inhibit cellular proliferation and clonogenic survival of prostate and lung cancer cells alone and in combination with ionizing radiation and the chemotherapy Docetaxel. Canagliflozin reduced glucose uptake, mitochondrial complex-I supported respiration, ATP, and lipogenesis while increasing the activating phosphorylation of AMPK. The overexpression of NDI1 blocked the anti-proliferative effects of Canagliflozin indicating reductions in mitochondrial respiration are critical for anti-proliferative actions. Conclusion: These data indicate that like the biguanide metformin, Canagliflozin not only lowers blood glucose but also inhibits complex-I supported respiration and cellular proliferation in prostate and lung cancer cells. These observations support the initiation of studies evaluating the clinical efficacy of Canagliflozin on limiting tumorigenesis in pre-clinical animal models as well epidemiological studies on cancer incidence relative to other glucose lowering therapies in clinical populations. Keywords: AMP

  13. Lymphocyte respiration in children with Trisomy 21

    Directory of Open Access Journals (Sweden)

    Aburawi Elhadi H

    2012-12-01

    Full Text Available Abstract Background This study measured lymphocyte mitochondrial O2 consumption (cellular respiration in children with trisomy 21. Methods Peripheral blood mononuclear cells were isolated from whole blood of trisomy 21 and control children and these cells were immediately used to measure cellular respiration rate. [O2] was determined as a function of time from the phosphorescence decay rates (1/τ of Pd (II-meso-tetra-(4-sulfonatophenyl-tetrabenzoporphyrin. In sealed vials containing lymphocytes and glucose as a respiratory substrate, [O2] declined linearly with time, confirming the zero-order kinetics of O2 conversion to H2O by cytochrome oxidase. The rate of respiration (k, in μM O2 min-1, thus, was the negative of the slope of [O2] vs. time. Cyanide inhibited O2 consumption, confirming that oxidation occurred in the mitochondrial respiratory chain. Results For control children (age = 8.8 ± 5.6 years, n = 26, the mean (± SD value of kc (in μM O2 per min per 107 cells was 1.36 ± 0.79 (coefficient of variation, Cv = 58%; median = 1.17; range = 0.60 to 3.12; -2SD = 0.61. For children with trisomy 21 (age = 7.2 ± 4.6 years, n = 26, the values of kc were 0.82 ± 0.62 (Cv = 76%; median = 0.60; range = 0.20 to 2.80, pp6.1 mU/L. Fourteen of 26 (54% children with trisomy 21 had kc values of 0.20 to 0.60 (i.e., kc positively correlated with body-mass index (BMI, R >0.302, serum creatinine (R >0.507, blood urea nitrogen (BUN, R >0.535 and albumin (R >0.446. Conclusions Children with trisomy 21 in this study have reduced lymphocyte bioenergetics. The clinical importance of this finding requires further studies.

  14. Characterization of infiltration rates from landfills: supporting groundwater modeling efforts.

    Science.gov (United States)

    Moo-Young, Horace; Johnson, Barnes; Johnson, Ann; Carson, David; Lew, Christine; Liu, Salley; Hancocks, Katherine

    2004-01-01

    The purpose of this paper is to review the literature to characterize infiltration rates from landfill liners to support groundwater modeling efforts. The focus of this investigation was on collecting studies that describe the performance of liners 'as installed' or 'as operated'. This document reviews the state of the science and practice on the infiltration rate through compacted clay liner (CCL) for 149 sites and geosynthetic clay liner (GCL) for 1 site. In addition, it reviews the leakage rate through geomembrane (GM) liners and composite liners for 259 sites. For compacted clay liners (CCL), there was limited information on infiltration rates (i.e., only 9 sites reported infiltration rates.), thus, it was difficult to develop a national distribution. The field hydraulic conductivities for natural clay liners range from 1 x 10(-9) cm s(-1) to 1 x 10(-4) cm s(-1), with an average of 6.5 x 10(-8) cm s(-1). There was limited information on geosynthetic clay liner. For composite lined and geomembrane systems, the leak detection system flow rates were utilized. The average monthly flow rate for composite liners ranged from 0-32 lphd for geomembrane and GCL systems to 0 to 1410 lphd for geomembrane and CCL systems. The increased infiltration for the geomembrane and CCL system may be attributed to consolidation water from the clay.

  15. A quasi-independence model to estimate failure rates

    International Nuclear Information System (INIS)

    Colombo, A.G.

    1988-01-01

    The use of a quasi-independence model to estimate failure rates is investigated. Gate valves of nuclear plants are considered, and two qualitative covariates are taken into account: plant location and reactor system. Independence between the two covariates and an exponential failure model are assumed. The failure rate of the components of a given system and plant is assumed to be a constant, but it may vary from one system to another and from one plant to another. This leads to the analysis of a contingency table. A particular feature of the model is the different operating time of the components in the various cells which can also be equal to zero. The concept of independence of the covariates is then replaced by that of quasi-independence. The latter definition, however, is used in a broader sense than usual. Suitable statistical tests are discussed and a numerical example illustrates the use of the method. (author)

  16. Neural Networks Modelling of Municipal Real Estate Market Rent Rates

    Directory of Open Access Journals (Sweden)

    Muczyński Andrzej

    2016-12-01

    Full Text Available This paper presents the results of research on the application of neural networks modelling of municipal real estate market rent rates. The test procedure was based on selected networks trained on the local real estate market data and transformation of the detected dependencies – through established models – to estimate the potential market rent rates of municipal premises. On this basis, the assessment of the adequacy of the actual market rent rates of municipal properties was made. Empirical research was conducted on the local real estate market of the city of Olsztyn in Poland. In order to describe the phenomenon of market rent rates formation an unidirectional three-layer network and a network of radial base was selected. Analyses showed a relatively low degree of convergence of the actual municipal rent rents with potential market rent rates. This degree was strongly varied depending on the type of business ran on the property and its’ social and economic impact. The applied research methodology and the obtained results can be used in order to rationalize municipal property management, including the activation of rental policy.

  17. Modeling emission rates and exposures from outdoor cooking

    Science.gov (United States)

    Edwards, Rufus; Princevac, Marko; Weltman, Robert; Ghasemian, Masoud; Arora, Narendra K.; Bond, Tami

    2017-09-01

    Approximately 3 billion individuals rely on solid fuels for cooking globally. For a large portion of these - an estimated 533 million - cooking is outdoors, where emissions from cookstoves pose a health risk to both cooks and other household and village members. Models that estimate emissions rates from stoves in indoor environments that would meet WHO air quality guidelines (AQG), explicitly don't account for outdoor cooking. The objectives of this paper are to link health based exposure guidelines with emissions from outdoor cookstoves, using a Monte Carlo simulation of cooking times from Haryana India coupled with inverse Gaussian dispersion models. Mean emission rates for outdoor cooking that would result in incremental increases in personal exposure equivalent to the WHO AQG during a 24-h period were 126 ± 13 mg/min for cooking while squatting and 99 ± 10 mg/min while standing. Emission rates modeled for outdoor cooking are substantially higher than emission rates for indoor cooking to meet AQG, because the models estimate impact of emissions on personal exposure concentrations rather than microenvironment concentrations, and because the smoke disperses more readily outdoors compared to indoor environments. As a result, many more stoves including the best performing solid-fuel biomass stoves would meet AQG when cooking outdoors, but may also result in substantial localized neighborhood pollution depending on housing density. Inclusion of the neighborhood impact of pollution should be addressed more formally both in guidelines on emissions rates from stoves that would be protective of health, and also in wider health impact evaluation efforts and burden of disease estimates. Emissions guidelines should better represent the different contexts in which stoves are being used, especially because in these contexts the best performing solid fuel stoves have the potential to provide significant benefits.

  18. The fusion rate in the transmission resonance model

    International Nuclear Information System (INIS)

    Jaendel, M.

    1992-01-01

    Resonant transmission of deuterons through a chain of target deuterons in a metal matrix has been suggested as an explanation for the cold fusion phenomena. In this paper the fusion rate in such transmission resonance models is estimated, and the basic physical constraints are discussed. The dominating contribution to the fusion yield is found to come from metastable states. The fusion rate is well described by the Wentzel-Kramer-Brillouin approximation and appears to be much too small to explain the experimental anomalies

  19. Copepod swimming behavior, respiration, and expression of stress-related genes in response to high stocking densities

    DEFF Research Database (Denmark)

    Nilsson, Birgitte; Jakobsen, Hans H.; Stief, Peter

    2017-01-01

    ,000 ind. L−1. Three biological/physiological end-points were studied: swimming behavior, respiration rate and expression level of stress-related genes. None of the elevated densities caused any significant change in swimming behavior, respiration rate or gene expression level. This study suggests...

  20. Regression Models and Fuzzy Logic Prediction of TBM Penetration Rate

    Directory of Open Access Journals (Sweden)

    Minh Vu Trieu

    2017-03-01

    Full Text Available This paper presents statistical analyses of rock engineering properties and the measured penetration rate of tunnel boring machine (TBM based on the data of an actual project. The aim of this study is to analyze the influence of rock engineering properties including uniaxial compressive strength (UCS, Brazilian tensile strength (BTS, rock brittleness index (BI, the distance between planes of weakness (DPW, and the alpha angle (Alpha between the tunnel axis and the planes of weakness on the TBM rate of penetration (ROP. Four (4 statistical regression models (two linear and two nonlinear are built to predict the ROP of TBM. Finally a fuzzy logic model is developed as an alternative method and compared to the four statistical regression models. Results show that the fuzzy logic model provides better estimations and can be applied to predict the TBM performance. The R-squared value (R2 of the fuzzy logic model scores the highest value of 0.714 over the second runner-up of 0.667 from the multiple variables nonlinear regression model.

  1. Regression Models and Fuzzy Logic Prediction of TBM Penetration Rate

    Science.gov (United States)

    Minh, Vu Trieu; Katushin, Dmitri; Antonov, Maksim; Veinthal, Renno

    2017-03-01

    This paper presents statistical analyses of rock engineering properties and the measured penetration rate of tunnel boring machine (TBM) based on the data of an actual project. The aim of this study is to analyze the influence of rock engineering properties including uniaxial compressive strength (UCS), Brazilian tensile strength (BTS), rock brittleness index (BI), the distance between planes of weakness (DPW), and the alpha angle (Alpha) between the tunnel axis and the planes of weakness on the TBM rate of penetration (ROP). Four (4) statistical regression models (two linear and two nonlinear) are built to predict the ROP of TBM. Finally a fuzzy logic model is developed as an alternative method and compared to the four statistical regression models. Results show that the fuzzy logic model provides better estimations and can be applied to predict the TBM performance. The R-squared value (R2) of the fuzzy logic model scores the highest value of 0.714 over the second runner-up of 0.667 from the multiple variables nonlinear regression model.

  2. Economic analysis of implementing respirator program or ventilation system in a manufacturing environment

    International Nuclear Information System (INIS)

    Saidi-Mehrabab, M.

    2000-01-01

    The techniques and methods of developing cost models for respirators are discussed. Models are developed and implemented in this study for nineteen types of respirators in two major classes (air-purifying and supplied-air) and one L EV system. One respirator model is selected for detailed discussion from among the twenty models. The technical cost method is used in constructing the cost models for each of the respirators and the L EV system. In this methodology, the costs of purchasing and using a typical respirator or L EV system are divided into two categories, variable costs and fixed costs. Variable costs consists of the cost of replaceable components and probabilistic mortality cost. Fixed cost is the annualized capital requirement plus interest cost. The criteria for estimating some of the cost elements are based on existing equations in the literature, engineering judgement and manufacturer-provided information. A technical cost model results from the integration of this information into a computerized framework. The cost models for discussion are presented in the order of increasing computational complexity. Through the economic analysis, the lowest cost type in each class of respirator is determined. The determination criteria are based on the minimum total annual cost and highest benefit cost ratio. The selected lowest cost respirators are compared with the L EV system from the economic standpoint to reveal the cost optimal alternative

  3. Effects of respirator use on worker performance

    Energy Technology Data Exchange (ETDEWEB)

    Cardarelli, R. [Yankee Atomic Electric Co., Bolton, MA (United States)

    1995-03-01

    In 1993, EPRI funded Yankee Atomic Electric Company to examine the effects of respirator use on worker efficiency. Phase I of Yankee`s effort was to develop a study design to determine respirator effects. Given success in Phase I, a larger population will be tested to determine if a stasitically significant respirator effect on performance can be measured. This paper summarizes the 1993 EPRI/Yankee Respirator Effects of Pilot Study, and describes the study design for the 1994 EPRI/Yankee Respirator Study to be conducted at the Oyster Creek Nuclear Power Plant. Also described is a summary of respirator effect studies that have been conducted during the last ten (10) years.

  4. Respirators: Supervisors Self-Study #43442

    Energy Technology Data Exchange (ETDEWEB)

    Chochoms, Michael [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-04-20

    This course, Respirators: Supervisors Self-Study (#43442), addresses training requirements for supervisors of respirator wearers as specified by the American National Standard Institute (ANSI) Standard for Respiratory Protection, ANSI Z88.2, and as incorporated by reference in the Department of Energy (DOE) Worker Health and Safety Rule, 10 Code of Federal Regulations (CFR) 851. This course also presents the responsibilities of supervisors of respirator wearers at Los Alamos National Laboratory (LANL).

  5. Soil respiration fluxes in a temperate mixed forest: seasonality and temperature sensitivities differ among microbial and root-rhizosphere respiration.

    Science.gov (United States)

    Ruehr, Nadine K; Buchmann, Nina

    2010-02-01

    Although soil respiration, a major CO(2) flux in terrestrial ecosystems, is known to be highly variable with time, the response of its component fluxes to temperature and phenology is less clear. Therefore, we partitioned soil respiration (SR) into microbial (MR) and root-rhizosphere respiration (RR) using small root exclusion treatments in a mixed mountain forest in Switzerland. In addition, fine root respiration (FRR) was determined with measurements of excised roots. RR and FRR were strongly related to each other (R(2) = 0.92, n = 7), with RR contributing about 46% and FRR about 32% to total SR. RR rates increased more strongly with temperature (Q(10) = 3.2) than MR rates (Q(10) = 2.3). Since the contribution of RR to SR was found to be higher during growing (50%) than during dormant periods (40%), we separated the 2-year data set into phenophases. During the growing period of 2007, the temperature sensitivity of RR (Q(10) = 2.5, R(2) = 0.62) was similar to that of MR (Q(10) = 2.2, R(2) = 0.57). However, during the dormant period of 2006/2007, RR was not related to soil temperature (R(2) = 0.44, n.s.), in contrast to MR (Q(10) = 7.2; R(2) = 0.92). To better understand the influence of plant activity on root respiration, we related RR and FRR rates to photosynthetic active radiation (both R(2) = 0.67, n = 7, P = 0.025), suggesting increased root respiration rates during times with high photosynthesis. During foliage green-up in spring 2008, i.e., from bud break to full leaf expansion, RR increased by a factor of 5, while soil temperature increased only by about 5 degrees C, leading to an extraordinary high Q(10) of 10.6; meanwhile, the contribution of RR to SR increased from 29 to 47%. This clearly shows that root respiration and its apparent temperature sensitivity highly depend on plant phenology and thus on canopy assimilation and carbon allocation belowground.

  6. Modeling and predicting historical volatility in exchange rate markets

    Science.gov (United States)

    Lahmiri, Salim

    2017-04-01

    Volatility modeling and forecasting of currency exchange rate is an important task in several business risk management tasks; including treasury risk management, derivatives pricing, and portfolio risk evaluation. The purpose of this study is to present a simple and effective approach for predicting historical volatility of currency exchange rate. The approach is based on a limited set of technical indicators as inputs to the artificial neural networks (ANN). To show the effectiveness of the proposed approach, it was applied to forecast US/Canada and US/Euro exchange rates volatilities. The forecasting results show that our simple approach outperformed the conventional GARCH and EGARCH with different distribution assumptions, and also the hybrid GARCH and EGARCH with ANN in terms of mean absolute error, mean of squared errors, and Theil's inequality coefficient. Because of the simplicity and effectiveness of the approach, it is promising for US currency volatility prediction tasks.

  7. Sensitivity of tropospheric heating rates to aerosols: A modeling study

    International Nuclear Information System (INIS)

    Hanna, A.F.; Shankar, U.; Mathur, R.

    1994-01-01

    The effect of aerosols on the radiation balance is critical to the energetics of the atmosphere. Because of the relatively long residence of specific types of aerosols in the atmosphere and their complex thermal and chemical interactions, understanding their behavior is crucial for understanding global climate change. The authors used the Regional Particulate Model (RPM) to simulate aerosols in the eastern United States in order to identify the aerosol characteristics of specific rural and urban areas these characteristics include size, concentration, and vertical profile. A radiative transfer model based on an improved δ-Eddington approximation with 26 spectral intervals spanning the solar spectrum was then used to analyze the tropospheric heating rates associated with these different aerosol distributions. The authors compared heating rates forced by differences in surface albedo associated with different land-use characteristics, and found that tropospheric heating and surface cooling are sensitive to surface properties such as albedo

  8. Physiological constrains on Sverdrup's Critical-Depth-Hypothesis: the influences of dark respiration and sinking

    DEFF Research Database (Denmark)

    Lindemann, Christian; Backhaus, Jan O.; St. John, Michael

    2015-01-01

    of the spring bloom. However, they neglect the cells ability to modify vital rates in response to changes in the external environment. In this study, we use a non-hydrostatic convection model coupled to an Individual-Based-Model to simulate changes phytoplankton cells during the transition from winter...... conditions as driven by convective mixing, and the onset of thermal stratification resulting in the spring bloom. The comparison between a simulation using a standard fixed rate approach in line with the original Sverdrup hypothesis and a simulation parameterized to include variable respiration and sinking...... replicate field observations when employing unrealistic parameter values. These results highlight the necessity to consider not only the physical and biological external controls determining phytoplankton dynamics but also the cells ability to modify critical physiological rates in response to external...

  9. Organic carbon budget for the eastern boundary of the North Atlantic subtropical gyre: major role of DOC in mesopelagic respiration.

    Science.gov (United States)

    Santana-Falcón, Yeray; Álvarez-Salgado, Xosé Antón; Pérez-Hernández, María Dolores; Hernández-Guerra, Alonso; Mason, Evan; Arístegui, Javier

    2017-08-31

    Transports of suspended particulate (POC susp ) and dissolved (DOC) organic carbon are inferred from a box-model covering the eastern boundary of the North Atlantic subtropical gyre. Corresponding net respiration rates (R) are obtained from a net organic carbon budget that is based on the transport estimates, and includes both vertical and lateral fluxes. The overall R in the mesopelagic layer (100-1500 m) is 1.6 ± 0.4 mmol C m -2 d -1 . DOC accounts for up to 53% of R as a result of drawdown of organic carbon within Eastern North Atlantic Central Water (ENACW) that is entrained into sinking Mediterranean Overflow Water (MOW) that leads to formation of Mediterranean water (MW) at intermediate depths (~900 m). DOC represents 90% of the respired non-sinking organic carbon. When converted into oxygen units, the computed net respiration rate represents less than half the oxygen utilization rates (OUR) reported for the mesopelagic waters of the subtropical North Atlantic. Mesoscale processes in the area, not quantified with our approach, could account in part for the OUR differences observed between our carbon budget and other published studies from the North Atlantic, although seasonal or interannual variability could also be responsible for the difference in the estimates.

  10. Modeling of Bit Error Rate in Cascaded 2R Regenerators

    DEFF Research Database (Denmark)

    Öhman, Filip; Mørk, Jesper

    2006-01-01

    and the regenerating nonlinearity is investigated. It is shown that an increase in nonlinearity can compensate for an increase in noise figure or decrease in signal power. Furthermore, the influence of the improvement in signal extinction ratio along the cascade and the importance of choosing the proper threshold......This paper presents a simple and efficient model for estimating the bit error rate in a cascade of optical 2R-regenerators. The model includes the influences of of amplifier noise, finite extinction ratio and nonlinear reshaping. The interplay between the different signal impairments...

  11. An SIRS model with a nonlinear incidence rate

    International Nuclear Information System (INIS)

    Jin Yu; Wang, Wendi; Xiao Shiwu

    2007-01-01

    The global dynamics of an SIRS model with a nonlinear incidence rate is investigated. We establish a threshold for a disease to be extinct or endemic, analyze the existence and asymptotic stability of equilibria, and verify the existence of bistable states, i.e., a stable disease free equilibrium and a stable endemic equilibrium or a stable limit cycle. In particular, we find that the model admits stability switches as a parameter changes. We also investigate the backward bifurcation, the Hopf bifurcation and Bogdanov-Takens bifurcation and obtain the Hopf bifurcation criteria and Bogdanov-Takens bifurcation curves, which are important for making strategies for controlling a disease

  12. Malaria model with periodic mosquito birth and death rates.

    Science.gov (United States)

    Dembele, Bassidy; Friedman, Avner; Yakubu, Abdul-Aziz

    2009-07-01

    In this paper, we introduce a model of malaria, a disease that involves a complex life cycle of parasites, requiring both human and mosquito hosts. The novelty of the model is the introduction of periodic coefficients into the system of one-dimensional equations, which account for the seasonal variations (wet and dry seasons) in the mosquito birth and death rates. We define a basic reproduction number R(0) that depends on the periodic coefficients and prove that if R(0)1 then the disease is endemic and may even be periodic.

  13. [Soil respiration dynamics and its controlling factors of typical vegetation communities on meadow steppes in the western Songnen Plain].

    Science.gov (United States)

    Wang, Ming; Liu, Xing-Tu; Li, Xiu-Jun; Zhang, Ji-Tao; Wang, Guo-Dong; Lu, Xin-Rui; Li, Xiao-Yu

    2014-01-01

    In order to accurately explore the soil respiration dynamics and its controlling factors of typical vegetation types in the western Songnen Plain, soil respiration rates of Chloris virgata, Puccinellia distans, Phragmites australis and Leymus chinensis communities were measured. The results showed that the diurnal curves of soil respiration rates of the four vegetation communities had simple peak values, which appeared at 11:00-15:00, and the valley values occurred at 21:00-1:00 or 3:00-5:00. The seasonal dynamic patterns of their soil respiration rates were similar, with the maximum (3.21-4.84 micromol CO2 x m(-2) x s(-1)) occurring in July and August and the minimum (0.46-1.51 micromol CO2 x m(-2) x s(-1)) in October. The soil respiration rates of the four vegetation communities had significant exponential correlations with ambient air temperature and soil temperature. Soil moisture, however, only played an important role in affecting the soil respiration rate of C. virgata community while air humidity near the soil surface was significantly correlated with the soil respiration rates of P. australis and L. chinensis communities. The soil salt contents seriously constrained the CO2 dioxide emission, and the soil pH, electrical conductivity (EC), exchangeable sodium percentage (ESP) could explain 87%-91% spatial variations of the soil respiration rate.

  14. Modeling Electric Discharges with Entropy Production Rate Principles

    Directory of Open Access Journals (Sweden)

    Thomas Christen

    2009-12-01

    Full Text Available Under which circumstances are variational principles based on entropy production rate useful tools for modeling steady states of electric (gas discharge systems far from equilibrium? It is first shown how various different approaches, as Steenbeck’s minimum voltage and Prigogine’s minimum entropy production rate principles are related to the maximum entropy production rate principle (MEPP. Secondly, three typical examples are discussed, which provide a certain insight in the structure of the models that are candidates for MEPP application. It is then thirdly argued that MEPP, although not being an exact physical law, may provide reasonable model parameter estimates, provided the constraints contain the relevant (nonlinear physical effects and the parameters to be determined are related to disregarded weak constraints that affect mainly global entropy production. Finally, it is additionally conjectured that a further reason for the success of MEPP in certain far from equilibrium systems might be based on a hidden linearity of the underlying kinetic equation(s.

  15. Radionuclide release rates from spent fuel for performance assessment modeling

    International Nuclear Information System (INIS)

    Curtis, D.B.

    1994-01-01

    In a scenario of aqueous transport from a high-level radioactive waste repository, the concentration of radionuclides in water in contact with the waste constitutes the source term for transport models, and as such represents a fundamental component of all performance assessment models. Many laboratory experiments have been done to characterize release rates and understand processes influencing radionuclide release rates from irradiated nuclear fuel. Natural analogues of these waste forms have been studied to obtain information regarding the long-term stability of potential waste forms in complex natural systems. This information from diverse sources must be brought together to develop and defend methods used to define source terms for performance assessment models. In this manuscript examples of measures of radionuclide release rates from spent nuclear fuel or analogues of nuclear fuel are presented. Each example represents a very different approach to obtaining a numerical measure and each has its limitations. There is no way to obtain an unambiguous measure of this or any parameter used in performance assessment codes for evaluating the effects of processes operative over many millennia. The examples are intended to suggest by example that in the absence of the ability to evaluate accuracy and precision, consistency of a broadly based set of data can be used as circumstantial evidence to defend the choice of parameters used in performance assessments

  16. Effects of environmental factors and soil properties on topographic variations of soil respiration

    OpenAIRE

    Tamai, K.

    2010-01-01

    Soil respiration rates were measured along different parts of a slope in (a) an evergreen forest with common brown forest soil and (b) a deciduous forest with immature soil. The effects of soil temperature, soil moisture and soil properties were estimated individually, and the magnitudes of these effects in the deciduous and evergreen forests were compared. In the evergreen forest with common brown forest soil, soil properties had the greatest effect on soil respiration rates, followed by soi...

  17. Inverse modelling of radionuclide release rates using gamma dose rate observations

    Science.gov (United States)

    Hamburger, Thomas; Evangeliou, Nikolaos; Stohl, Andreas; von Haustein, Christoph; Thummerer, Severin; Wallner, Christian

    2015-04-01

    Severe accidents in nuclear power plants such as the historical accident in Chernobyl 1986 or the more recent disaster in the Fukushima Dai-ichi nuclear power plant in 2011 have drastic impacts on the population and environment. Observations and dispersion modelling of the released radionuclides help to assess the regional impact of such nuclear accidents. Modelling the increase of regional radionuclide activity concentrations, which results from nuclear accidents, underlies a multiplicity of uncertainties. One of the most significant uncertainties is the estimation of the source term. That is, the time dependent quantification of the released spectrum of radionuclides during the course of the nuclear accident. The quantification of the source term may either remain uncertain (e.g. Chernobyl, Devell et al., 1995) or rely on estimates given by the operators of the nuclear power plant. Precise measurements are mostly missing due to practical limitations during the accident. The release rates of radionuclides at the accident site can be estimated using inverse modelling (Davoine and Bocquet, 2007). The accuracy of the method depends amongst others on the availability, reliability and the resolution in time and space of the used observations. Radionuclide activity concentrations are observed on a relatively sparse grid and the temporal resolution of available data may be low within the order of hours or a day. Gamma dose rates, on the other hand, are observed routinely on a much denser grid and higher temporal resolution and provide therefore a wider basis for inverse modelling (Saunier et al., 2013). We present a new inversion approach, which combines an atmospheric dispersion model and observations of radionuclide activity concentrations and gamma dose rates to obtain the source term of radionuclides. We use the Lagrangian particle dispersion model FLEXPART (Stohl et al., 1998; Stohl et al., 2005) to model the atmospheric transport of the released radionuclides. The

  18. Tantalum strength model incorporating temperature, strain rate and pressure

    Science.gov (United States)

    Lim, Hojun; Battaile, Corbett; Brown, Justin; Lane, Matt

    Tantalum is a body-centered-cubic (BCC) refractory metal that is widely used in many applications in high temperature, strain rate and pressure environments. In this work, we propose a physically-based strength model for tantalum that incorporates effects of temperature, strain rate and pressure. A constitutive model for single crystal tantalum is developed based on dislocation kink-pair theory, and calibrated to measurements on single crystal specimens. The model is then used to predict deformations of single- and polycrystalline tantalum. In addition, the proposed strength model is implemented into Sandia's ALEGRA solid dynamics code to predict plastic deformations of tantalum in engineering-scale applications at extreme conditions, e.g. Taylor impact tests and Z machine's high pressure ramp compression tests, and the results are compared with available experimental data. Sandia National Laboratories is a multi program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

  19. Rate-Based Model Predictive Control of Turbofan Engine Clearance

    Science.gov (United States)

    DeCastro, Jonathan A.

    2006-01-01

    An innovative model predictive control strategy is developed for control of nonlinear aircraft propulsion systems and sub-systems. At the heart of the controller is a rate-based linear parameter-varying model that propagates the state derivatives across the prediction horizon, extending prediction fidelity to transient regimes where conventional models begin to lose validity. The new control law is applied to a demanding active clearance control application, where the objectives are to tightly regulate blade tip clearances and also anticipate and avoid detrimental blade-shroud rub occurrences by optimally maintaining a predefined minimum clearance. Simulation results verify that the rate-based controller is capable of satisfying the objectives during realistic flight scenarios where both a conventional Jacobian-based model predictive control law and an unconstrained linear-quadratic optimal controller are incapable of doing so. The controller is evaluated using a variety of different actuators, illustrating the efficacy and versatility of the control approach. It is concluded that the new strategy has promise for this and other nonlinear aerospace applications that place high importance on the attainment of control objectives during transient regimes.

  20. Mechanistic Modeling of Water Replenishment Rate of Zeer Refrigerator

    Directory of Open Access Journals (Sweden)

    B. N. Nwankwojike

    2017-06-01

    Full Text Available A model for predicting the water replenishment rate of zeer pot refrigerator was developed in this study using mechanistic modeling approach and evaluated at Obowo, Imo State, Nigeria using six fruits, tomatoes, guava, okra, banana, orange and avocado pear. The developed model confirmed zeer pot water replenishment rate as a function of ambient temperature, relative humidity, wind speed, thermal conductivity of the pot materials and sand, density of air and water vapor, permeability coefficient of clay and heat transfer coefficient of water into air, circumferential length, height of pot, geometrical profile of the pot, heat load of the food preserved, heat flow into the device and gradient at which the pot is placed above ground level. Compared to the conventional approach of water replenishment, performance analysis results revealed 44% to 58% water economy when the zeer pot’s water was replenished based on the model’s prediction; while there was no significant difference in the shelf-life of the fruits preserved with both replenishment methods. Application of the developed water replenishment model facilitates optimal water usage in this system, thereby reducing operational cost of zeer pot refrigerator.

  1. Rate control management of atrial fibrillation: may a mathematical model suggest an ideal heart rate?

    Directory of Open Access Journals (Sweden)

    Matteo Anselmino

    Full Text Available Despite the routine prescription of rate control therapy for atrial fibrillation (AF, clinical evidence demonstrating a heart rate target is lacking. Aim of the present study was to run a mathematical model simulating AF episodes with a different heart rate (HR to predict hemodynamic parameters for each situation.The lumped model, representing the pumping heart together with systemic and pulmonary circuits, was run to simulate AF with HR of 50, 70, 90, 110 and 130 bpm, respectively.Left ventricular pressure increased by 57%, from 33.92±37.56 mmHg to 53.15±47.56 mmHg, and mean systemic arterial pressure increased by 27%, from 82.66±14.04 mmHg to 105.3±7.6 mmHg, at the 50 and 130 bpm simulations, respectively. Stroke volume (from 77.45±8.50 to 39.09±8.08 mL, ejection fraction (from 61.10±4.40 to 39.32±5.42% and stroke work (SW, from 0.88±0.04 to 0.58±0.09 J decreased by 50, 36 and 34%, at the 50 and 130 bpm simulations, respectively. In addition, oxygen consumption indexes (rate pressure product - RPP, tension time index per minute - TTI/min, and pressure volume area per minute - PVA/min increased from the 50 to the 130 bpm simulation, respectively, by 186% (from 5598±1939 to 15995±3219 mmHg/min, 56% (from 2094±265 to 3257±301 mmHg s/min and 102% (from 57.99±17.90 to 117.4±26.0 J/min. In fact, left ventricular efficiency (SW/PVA decreased from 80.91±2.91% at 50 bpm to 66.43±3.72% at the 130 bpm HR simulation.Awaiting compulsory direct clinical evidences, the present mathematical model suggests that lower HRs during permanent AF relates to improved hemodynamic parameters, cardiac efficiency, and lower oxygen consumption.

  2. Rate control management of atrial fibrillation: may a mathematical model suggest an ideal heart rate?

    Science.gov (United States)

    Anselmino, Matteo; Scarsoglio, Stefania; Camporeale, Carlo; Saglietto, Andrea; Gaita, Fiorenzo; Ridolfi, Luca

    2015-01-01

    Despite the routine prescription of rate control therapy for atrial fibrillation (AF), clinical evidence demonstrating a heart rate target is lacking. Aim of the present study was to run a mathematical model simulating AF episodes with a different heart rate (HR) to predict hemodynamic parameters for each situation. The lumped model, representing the pumping heart together with systemic and pulmonary circuits, was run to simulate AF with HR of 50, 70, 90, 110 and 130 bpm, respectively. Left ventricular pressure increased by 57%, from 33.92±37.56 mmHg to 53.15±47.56 mmHg, and mean systemic arterial pressure increased by 27%, from 82.66±14.04 mmHg to 105.3±7.6 mmHg, at the 50 and 130 bpm simulations, respectively. Stroke volume (from 77.45±8.50 to 39.09±8.08 mL), ejection fraction (from 61.10±4.40 to 39.32±5.42%) and stroke work (SW, from 0.88±0.04 to 0.58±0.09 J) decreased by 50, 36 and 34%, at the 50 and 130 bpm simulations, respectively. In addition, oxygen consumption indexes (rate pressure product - RPP, tension time index per minute - TTI/min, and pressure volume area per minute - PVA/min) increased from the 50 to the 130 bpm simulation, respectively, by 186% (from 5598±1939 to 15995±3219 mmHg/min), 56% (from 2094±265 to 3257±301 mmHg s/min) and 102% (from 57.99±17.90 to 117.4±26.0 J/min). In fact, left ventricular efficiency (SW/PVA) decreased from 80.91±2.91% at 50 bpm to 66.43±3.72% at the 130 bpm HR simulation. Awaiting compulsory direct clinical evidences, the present mathematical model suggests that lower HRs during permanent AF relates to improved hemodynamic parameters, cardiac efficiency, and lower oxygen consumption.

  3. A model for predicting wear rates in tooth enamel.

    Science.gov (United States)

    Borrero-Lopez, Oscar; Pajares, Antonia; Constantino, Paul J; Lawn, Brian R

    2014-09-01

    It is hypothesized that wear of enamel is sensitive to the presence of sharp particulates in oral fluids and masticated foods. To this end, a generic model for predicting wear rates in brittle materials is developed, with specific application to tooth enamel. Wear is assumed to result from an accumulation of elastic-plastic micro-asperity events. Integration over all such events leads to a wear rate relation analogous to Archard׳s law, but with allowance for variation in asperity angle and compliance. The coefficient K in this relation quantifies the wear severity, with an arbitrary distinction between 'mild' wear (low K) and 'severe' wear (high K). Data from the literature and in-house wear-test experiments on enamel specimens in lubricant media (water, oil) with and without sharp third-body particulates (silica, diamond) are used to validate the model. Measured wear rates can vary over several orders of magnitude, depending on contact asperity conditions, accounting for the occurrence of severe enamel removal in some human patients (bruxing). Expressions for the depth removal rate and number of cycles to wear down occlusal enamel in the low-crowned tooth forms of some mammals are derived, with tooth size and enamel thickness as key variables. The role of 'hard' versus 'soft' food diets in determining evolutionary paths in different hominin species is briefly considered. A feature of the model is that it does not require recourse to specific material removal mechanisms, although processes involving microplastic extrusion and microcrack coalescence are indicated. Published by Elsevier Ltd.

  4. [Effects of Warming and Straw Application on Soil Respiration and Enzyme Activity in a Winter Wheat Cropland].

    Science.gov (United States)

    Chen, Shu-tao; Sang, Lin; Zhang, Xu; Hu, Zheng-hua

    2016-02-15

    In order to investigate the effects of warming and straw application on soil respiration and enzyme activity, a field experiment was performed from November 2014 to May 2015. Four treatments, which were control (CK), warming, straw application, and warming and straw application, were arranged in field. Seasonal variability in soil respiration, soil temperature and soil moisture for different treatments were measured. Urease, invertase, and catalase activities for different treatments were measured at the elongation, booting, and anthesis stages. The results showed that soil respiration in different treatments had similar seasonal variation patterns. Seasonal mean soil respiration rates for the CK, warming, straw application, and warming and straw application treatments were 1.46, 1.96, 1.92, and 2.45 micromol x (m2 x s)(-1), respectively. ANOVA indicated that both warming and straw applications significantly (P soil respiration compared to the control treatment. The relationship between soil respiration and soil temperature in different treatments fitted with the exponential regression function. The exponential regression functions explained 34.3%, 28.1%, 24.6%, and 32.0% variations of soil respiration for CK, warming, straw application, and warming and straw application treatments, respectively. Warming and straw applications significantly (P soil respiration and urease activity fitted with a linear regression function, with the P value of 0.061. The relationship between soil respiration and invertase (P = 0.013), and between soil respiration and catalase activity (P = 0.002) fitted well with linear regression functions.

  5. Ecosystem respiration depends strongly on photosynthesis in a temperate heath

    DEFF Research Database (Denmark)

    Larsen, Klaus Steenberg; Ibrom, Andreas; Beier, Claus

    2007-01-01

    We measured net ecosystem CO2 flux (F-n) and ecosystem respiration (R-E), and estimated gross ecosystem photosynthesis (P-g) by difference, for two years in a temperate heath ecosystem using a chamber method. The exchange rates of carbon were high and of similar magnitude as for productive forest...... ecosystems with a net ecosystem carbon gain during the second year of 293 +/- 11 g C m(-2) year(-1) showing that the carbon sink strength of heather-dominated ecosystems may be considerable when C. vulgaris is in the building phase of its life cycle. The estimated gross ecosystem photosynthesis and ecosystem.......65) was improved when the P-g rate was incorporated into the model (second year; R-2 = 0.79), suggesting that daytime R-E increased with increasing photosynthesis. Furthermore, the temperature sensitivity of R-E decreased from apparent Q(10) values of 3.3 to 3.9 by the classic equation to a more realistic Q(10...

  6. Soil Carbon Inputs and Ecosystem Respiration: a Field Priming Experiment in Arctic Coastal Tundra

    Science.gov (United States)

    Vaughn, L. S.; Zhu, B.; Bimueller, C.; Curtis, J. B.; Chafe, O.; Bill, M.; Abramoff, R. Z.; Torn, M. S.

    2016-12-01

    In Arctic ecosystems, climate change is expected to influence soil carbon stocks through changes in both plant carbon inputs and organic matter decomposition. This study addresses the potential for a priming effect, an interaction between these changes in which root-derived carbon inputs alter SOM decomposition rates via microbial biomass increases, co-metabolism of substrates, induced nitrogen limitation, or other possible mechanisms. The priming effect has been observed in numerous laboratory and greenhouse experiments, and is increasingly included in ecosystem models. Few studies, however, have evaluated the priming effect with in situ field manipulations. In a two-year field experiment in Barrow, Alaska, we tested for a priming effect under natural environmental variability. In September 2014 and August 2015, we added 6.1g of 13C-labeled glucose to 25cm diameter mesocosms, 15cm below the soil surface in the mineral soil layer. Over the following month, we quantified effects on the rate and temperature sensitivity of native (non-glucose) ecosystem respiration and GPP. Following the 2014 treatment, soil samples were collected at 1 and 3 weeks for microbial biomass carbon and 13C/12C analysis, and ion exchange membranes were buried for one week to assess nitrate and ammonium availability. In contrast with many laboratory incubation studies using soils from a broad range of ecosystems, we observed no significant priming effect. In spite of a clear signal of 13C-glucose decomposition in respired CO2 and microbial biomass, we detected no treatment effect on background ecosystem respiration or total microbial biomass carbon. Our findings suggest that glucose taken up by microbes was not used for production of additional SOM-decomposing enzymes, possibly due to stoichiometric limitations on enzyme production. To best inform models representing complex and dynamic ecosystems, this study calls for further research relating theory, laboratory findings, and field

  7. Effect of test exercises and mask donning on measured respirator fit.

    Science.gov (United States)

    Crutchfield, C D; Fairbank, E O; Greenstein, S L

    1999-12-01

    Quantitative respirator fit test protocols are typically defined by a series of fit test exercises. A rationale for the protocols that have been developed is generally not available. There also is little information available that describes the effect or effectiveness of the fit test exercises currently specified in respiratory protection standards. This study was designed to assess the relative impact of fit test exercises and mask donning on respirator fit as measured by a controlled negative pressure and an ambient aerosol fit test system. Multiple donnings of two different sizes of identical respirator models by each of 14 test subjects showed that donning affects respirator fit to a greater degree than fit test exercises. Currently specified fit test protocols emphasize test exercises, and the determination of fit is based on a single mask donning. A rationale for a modified fit test protocol based on fewer, more targeted test exercises and multiple mask donnings is presented. The modified protocol identified inadequately fitting respirators as effectively as the currently specified Occupational Safety and Health Administration (OSHA) quantitative fit test protocol. The controlled negative pressure system measured significantly (p < 0.0001) more respirator leakage than the ambient aerosol fit test system. The bend over fit test exercise was found to be predictive of poor respirator fit by both fit test systems. For the better fitting respirators, only the talking exercise generated aerosol fit factors that were significantly lower (p < 0.0001) than corresponding donning fit factors.

  8. Experimental warming does not enhance soil respiration in a semiarid temperate forest-steppe ecosystem

    DEFF Research Database (Denmark)

    Lellei-Kovacs, E.; Kovacs-Lang, E.; Kalapos, T.

    2008-01-01

    are still limited. Soil respiration rate-measured monthly between April and November from 2003 to 2006-remained very low (0.09 - 1.53 mu mol CO2 m(-2) s(-1))in accordance with the moderate biological activity and low humus content of the nutrient poor, coarse sandy soil. Specific soil respiration rate...... ( calculated for unit soil organic matter content), however, was relatively high (0.36 - 7.92 mu mol CO g(-1) C(org)h(-1)) suggesting substrate limitation for soil biological activity. During the day, soil respiration rate was significantly lower at dawn than at midday, while seasonally clear temperature......The influence of simulated climate change on soil respiration was studied in a field experiment on 4 m x 5 m plots in the semiarid temperate Pannonian sand forest-steppe. This ecosystem type has low productivity and soil organic matter content, and covers large areas, yet data on soil carbon fluxes...

  9. Bayes estimation of the general hazard rate model

    International Nuclear Information System (INIS)

    Sarhan, A.

    1999-01-01

    In reliability theory and life testing models, the life time distributions are often specified by choosing a relevant hazard rate function. Here a general hazard rate function h(t)=a+bt c-1 , where c, a, b are constants greater than zero, is considered. The parameter c is assumed to be known. The Bayes estimators of (a,b) based on the data of type II/item-censored testing without replacement are obtained. A large simulation study using Monte Carlo Method is done to compare the performance of Bayes with regression estimators of (a,b). The criterion for comparison is made based on the Bayes risk associated with the respective estimator. Also, the influence of the number of failed items on the accuracy of the estimators (Bayes and regression) is investigated. Estimations for the parameters (a,b) of the linearly increasing hazard rate model h(t)=a+bt, where a, b are greater than zero, can be obtained as the special case, letting c=2

  10. Spallation model for the high strain rates range

    Science.gov (United States)

    Dekel, E.; Eliezer, S.; Henis, Z.; Moshe, E.; Ludmirsky, A.; Goldberg, I. B.

    1998-11-01

    Measurements of the dynamic spall strength in aluminum and copper shocked by a high power laser to pressures of hundreds of kbars show a rapid increase in the spall strength with the strain rate at values of about 107 s-1. We suggest that this behavior is a result of a change in the spall mechanism. At low strain rates the spall is caused by the motion and coalescence of material's initial flaws. At high strain rates there is not enough time for the flaws to move and the spall is produced by the formation and coalescence of additional cavities where the interatomic forces become dominant. Material under tensile stress is in a metastable condition and cavities of a critical radius are formed in it due to thermal fluctuations. These cavities grow due to the tension. The total volume of the voids grow until the material disintegrates at the spall plane. Simplified calculations based on this model, describing the metal as a viscous liquid, give results in fairly good agreement with the experimental data and predict the increase in spall strength at high strain rates.

  11. Modelling the bioconversion of cellulose into microbial products: rate limitations

    Energy Technology Data Exchange (ETDEWEB)

    Asenjo, J A

    1984-12-01

    The direct bioconversion of cellulose into microbial products carried out as a simultaneous saccharification and fermentation has a strong effect on the rates of cellulose degradation because cellobiose and glucose inhibition of the reaction are circumvented. A general mathematical model of the kinetics of this bioconversion has been developed. Its use in representing aerobic systems and in the analysis of the kinetic limitations has been investigated. Simulations have been carried out to find the rate limiting steps in slow fermentations and in rapid ones as determined by the specific rate of product formation. The requirements for solubilising and depolymerising enzyme activities (cellulase and cellobiase) in these systems has been determined. The activity that have been obtained for fungal cellulases are adequate for the kinetic requirements of the fastest fermentative strains. The results also show that for simultaneous bioconversions where strong cellobiose and glucose inhibition is overcome, no additional cellobiase is necessary to increase the rate of product formation. These results are useful for the selection of cellolytic micro-organisms and in the determination of enzymes to be cloned in recombinant strains. 17 references.

  12. Stochastic model of microcredit interest rate in Morocco

    Directory of Open Access Journals (Sweden)

    Ghita Bennouna

    2016-11-01

    Full Text Available Access to microcredit can have a beneficial effect on the well-being of low-income households excluded from the traditional banking system. It allows this population to receive affordable financial services to help them to meet their needs and to improve their living conditions. However to provide access to credit, microfinance institutions should ensure not only their social mission but also commercial and financial mission to enable the institution to perpetuate and become self-sufficient. To this end, MFIs (microfinance institutions must apply an interest rate that covers their costs and risk, while generating profits, Also microentrepreneurs need, to this end, to ensure the profitability of their activities. This paper presents the microfinance sector in Morocco. It focuses then on the interest rate applied by the Moroccan microfinance institutions; it provides also a comparative study between Morocco and other comparable countries in terms of interest rates charged to borrowers. Finally, this article presents a stochastic model of the interest rate in microcredit built in random loan repayment periods and on a real example of the program of loans of microfinance institution in Morocco

  13. Crash rates analysis in China using a spatial panel model

    Directory of Open Access Journals (Sweden)

    Wonmongo Lacina Soro

    2017-10-01

    Full Text Available The consideration of spatial externalities in traffic safety analysis is of paramount importance for the success of road safety policies. Yet, the quasi-totality of spatial dependence studies on crash rates is performed within the framework of single-equation spatial cross-sectional studies. The present study extends the spatial cross-sectional scheme to a spatial fixed-effects panel model estimated using the maximum likelihood method. The spatial units are the 31 administrative regions of mainland China over the period 2004–2013. The presence of neighborhood effects is evidenced through the Moran's I statistic. Consistent with previous studies, the analysis reveals that omitting the spatial effects in traffic safety analysis is likely to bias the estimation results. The spatial and error lags are all positive and statistically significant suggesting similarities of crash rates pattern in neighboring regions. Some other explanatory variables, such as freight traffic, the length of paved roads and the populations of age 65 and above are related to higher rates while the opposite trend is observed for the Gross Regional Product, the urban unemployment rate and passenger traffic.

  14. Soil respiration in the cold desert environment of the Colorado Plateau (USA): Abiotic regulators and thresholds

    Science.gov (United States)

    Fernandez, D.P.; Neff, J.C.; Belnap, J.; Reynolds, R.L.

    2006-01-01

    Decomposition is central to understanding ecosystem carbon exchange and nutrient-release processes. Unlike mesic ecosystems, which have been extensively studied, xeric landscapes have received little attention; as a result, abiotic soil-respiration regulatory processes are poorly understood in xeric environments. To provide a more complete and quantitative understanding about how abiotic factors influence soil respiration in xeric ecosystems, we conducted soil- respiration and decomposition-cloth measurements in the cold desert of southeast Utah. Our study evaluated when and to what extent soil texture, moisture, temperature, organic carbon, and nitrogen influence soil respiration and examined whether the inverse-texture hypothesis applies to decomposition. Within our study site, the effect of texture on moisture, as described by the inverse texture hypothesis, was evident, but its effect on decomposition was not. Our results show temperature and moisture to be the dominant abiotic controls of soil respiration. Specifically, temporal offsets in temperature and moisture conditions appear to have a strong control on soil respiration, with the highest fluxes occurring in spring when temperature and moisture were favorable. These temporal offsets resulted in decomposition rates that were controlled by soil moisture and temperature thresholds. The highest fluxes of CO2 occurred when soil temperature was between 10 and 16??C and volumetric soil moisture was greater than 10%. Decomposition-cloth results, which integrate decomposition processes across several months, support the soil-respiration results and further illustrate the seasonal patterns of high respiration rates during spring and low rates during summer and fall. Results from this study suggest that the parameters used to predict soil respiration in mesic ecosystems likely do not apply in cold-desert environments. ?? Springer 2006.

  15. Forecasting the mortality rates using Lee-Carter model and Heligman-Pollard model

    Science.gov (United States)

    Ibrahim, R. I.; Ngataman, N.; Abrisam, W. N. A. Wan Mohd

    2017-09-01

    Improvement in life expectancies has driven further declines in mortality. The sustained reduction in mortality rates and its systematic underestimation has been attracting the significant interest of researchers in recent years because of its potential impact on population size and structure, social security systems, and (from an actuarial perspective) the life insurance and pensions industry worldwide. Among all forecasting methods, the Lee-Carter model has been widely accepted by the actuarial community and Heligman-Pollard model has been widely used by researchers in modelling and forecasting future mortality. Therefore, this paper only focuses on Lee-Carter model and Heligman-Pollard model. The main objective of this paper is to investigate how accurately these two models will perform using Malaysian data. Since these models involves nonlinear equations that are explicitly difficult to solve, the Matrix Laboratory Version 8.0 (MATLAB 8.0) software will be used to estimate the parameters of the models. Autoregressive Integrated Moving Average (ARIMA) procedure is applied to acquire the forecasted parameters for both models as the forecasted mortality rates are obtained by using all the values of forecasted parameters. To investigate the accuracy of the estimation, the forecasted results will be compared against actual data of mortality rates. The results indicate that both models provide better results for male population. However, for the elderly female population, Heligman-Pollard model seems to underestimate to the mortality rates while Lee-Carter model seems to overestimate to the mortality rates.

  16. Significance of heme-based respiration in meat spoilage caused by Leuconostoc gasicomitatum.

    Science.gov (United States)

    Jääskeläinen, Elina; Johansson, Per; Kostiainen, Olli; Nieminen, Timo; Schmidt, Georg; Somervuo, Panu; Mohsina, Marzia; Vanninen, Paula; Auvinen, Petri; Björkroth, Johanna

    2013-02-01

    Leuconostoc gasicomitatum is a psychrotrophic lactic acid bacterium (LAB) which causes spoilage in cold-stored modified-atmosphere-packaged (MAP) meat products. In addition to the fermentative metabolism, L. gasicomitatum is able to respire when exogenous heme and oxygen are available. In this study, we investigated the respiration effects on growth rate, biomass, gene expression, and volatile organic compound (VOC) production in laboratory media and pork loin. The meat samples were evaluated by a sensory panel every second or third day for 29 days. We observed that functional respiration increased the growth (rate and yield) of L. gasicomitatum in laboratory media with added heme and in situ meat with endogenous heme. Respiration increased enormously (up to 2,600-fold) the accumulation of acetoin and diacetyl, which are buttery off-odor compounds in meat. Our transcriptome analyses showed that the gene expression patterns were quite similar, irrespective of whether respiration was turned off by excluding heme from the medium or mutating the cydB gene, which is essential in the respiratory chain. The respiration-based growth of L. gasicomitatum in meat was obtained in terms of population development and subsequent development of sensory characteristics. Respiration is thus a key factor explaining why L. gasicomitatum is so well adapted in high-oxygen packed meat.

  17. Mitochondrial Respiration Is Reduced in Atherosclerosis, Promoting Necrotic Core Formation and Reducing Relative Fibrous Cap Thickness.

    Science.gov (United States)

    Yu, Emma P K; Reinhold, Johannes; Yu, Haixiang; Starks, Lakshi; Uryga, Anna K; Foote, Kirsty; Finigan, Alison; Figg, Nichola; Pung, Yuh-Fen; Logan, Angela; Murphy, Michael P; Bennett, Martin

    2017-12-01

    Mitochondrial DNA (mtDNA) damage is present in murine and human atherosclerotic plaques. However, whether endogenous levels of mtDNA damage are sufficient to cause mitochondrial dysfunction and whether decreasing mtDNA damage and improving mitochondrial respiration affects plaque burden or composition are unclear. We examined mitochondrial respiration in human atherosclerotic plaques and whether augmenting mitochondrial respiration affects atherogenesis. Human atherosclerotic plaques showed marked mitochondrial dysfunction, manifested as reduced mtDNA copy number and oxygen consumption rate in fibrous cap and core regions. Vascular smooth muscle cells derived from plaques showed impaired mitochondrial respiration, reduced complex I expression, and increased mitophagy, which was induced by oxidized low-density lipoprotein. Apolipoprotein E-deficient (ApoE -/- ) mice showed decreased mtDNA integrity and mitochondrial respiration, associated with increased mitochondrial reactive oxygen species. To determine whether alleviating mtDNA damage and increasing mitochondrial respiration affects atherogenesis, we studied ApoE -/- mice overexpressing the mitochondrial helicase Twinkle (Tw + /ApoE -/- ). Tw + /ApoE -/- mice showed increased mtDNA integrity, copy number, respiratory complex abundance, and respiration. Tw + /ApoE -/- mice had decreased necrotic core and increased fibrous cap areas, and Tw + /ApoE -/- bone marrow transplantation also reduced core areas. Twinkle increased vascular smooth muscle cell mtDNA integrity and respiration. Twinkle also promoted vascular smooth muscle cell proliferation and protected both vascular smooth muscle cells and macrophages from oxidative stress-induced apoptosis. Endogenous mtDNA damage in mouse and human atherosclerosis is associated with significantly reduced mitochondrial respiration. Reducing mtDNA damage and increasing mitochondrial respiration decrease necrotic core and increase fibrous cap areas independently of changes in

  18. Boreal and temperate trees show strong acclimation of respiration to warming.

    Science.gov (United States)

    Reich, Peter B; Sendall, Kerrie M; Stefanski, Artur; Wei, Xiaorong; Rich, Roy L; Montgomery, Rebecca A

    2016-03-31

    Plant respiration results in an annual flux of carbon dioxide (CO2) to the atmosphere that is six times as large as that due to the emissions from fossil fuel burning, so changes in either will impact future climate. As plant respiration responds positively to temperature, a warming world may result in additional respiratory CO2 release, and hence further atmospheric warming. Plant respiration can acclimate to altered temperatures, however, weakening the positive feedback of plant respiration to rising global air temperature, but a lack of evidence on long-term (weeks to years) acclimation to climate warming in field settings currently hinders realistic predictions of respiratory release of CO2 under future climatic conditions. Here we demonstrate strong acclimation of leaf respiration to both experimental warming and seasonal temperature variation for juveniles of ten North American tree species growing for several years in forest conditions. Plants grown and measured at 3.4 °C above ambient temperature increased leaf respiration by an average of 5% compared to plants grown and measured at ambient temperature; without acclimation, these increases would have been 23%. Thus, acclimation eliminated 80% of the expected increase in leaf respiration of non-acclimated plants. Acclimation of leaf respiration per degree temperature change was similar for experimental warming and seasonal temperature variation. Moreover, the observed increase in leaf respiration per degree increase in temperature was less than half as large as the average reported for previous studies, which were conducted largely over shorter time scales in laboratory settings. If such dampening effects of leaf thermal acclimation occur generally, the increase in respiration rates of terrestrial plants in response to climate warming may be less than predicted, and thus may not raise atmospheric CO2 concentrations as much as anticipated.

  19. Shrub encroachment alters sensitivity of soil respiration to temperature and moisture

    Science.gov (United States)

    Cable, Jessica M.; Barron-Gafford, Greg A.; Ogle, Kiona; Pavao-Zuckerman, Mitchell; Scott, Russell L.; Williams, David G.; Huxman, Travis E.

    2012-03-01

    A greater abundance of shrubs in semiarid grasslands affects the spatial patterns of soil temperature, moisture, and litter, resulting in fertile islands with potentially enhanced soil metabolic activity. The goal of this study was to quantify the microsite specificity of soil respiration in a semiarid riparian ecosystem experiencing shrub encroachment. We quantified the response of soil respiration to different microsite conditions created by big mesquite shrubs (near the trunk and the canopy edge), medium-sized mesquite, sacaton bunchgrasses, and open spaces. We hypothesized that soil respiration would be more temperature sensitive and less moisture sensitive and have a greater magnitude in shrub microsites compared with grass and open microsites. Field and incubation soil respiration data were simultaneously analyzed in a Bayesian framework to quantify the microsite-specific temperature and moisture sensitivities and magnitude of respiration. The analysis showed that shrub expansion increases the heterogeneity of respiration. Respiration has greater temperature sensitivity near the shrub canopy edge, and respiration rates are higher overall under big mesquite compared with those of the other microsites. Respiration in the microsites beneath medium-sized mesquites does not behave like a downscaled version of big mesquite microsites. The grass microsites show more similarity to big mesquite microsites than medium-sized shrubs. This study shows there can be a great deal of fine-scale spatial heterogeneity that accompanies shifts in vegetation structure. Such complexity presents a challenge in scaling soil respiration fluxes to the landscape for systems experiencing shrub encroachment, but quantifying this complexity is significantly important in determining overall ecosystem metabolic behavior.

  20. Modelling Counterparty Credit Risk in Czech Interest Rate Swaps

    Directory of Open Access Journals (Sweden)

    Lenka Křivánková

    2017-01-01

    Full Text Available According to the Basel Committee’s estimate, three quarters of counterparty credit risk losses during the financial crisis in 2008 originate from credit valuation adjustment’s losses and not from actual defaults. Therefore, from 2015, the Third Basel Accord (EU, 2013a and (EU, 2013b instructed banks to calculate the capital requirement for the risk of credit valuation adjustment (CVA. Banks are trying to model CVA to hold the prescribed standards and also reach the lowest possible impact on their profit. In this paper, we try to model CVA using methods that are in compliance with the prescribed standards and also achieve the smallest possible impact on the bank’s earnings. To do so, a data set of interest rate swaps from 2015 is used. The interest rate term structure is simulated using the Hull-White one-factor model and Monte Carlo methods. Then, the probability of default for each counterparty is constructed. A safe level of CVA is reached in spite of the calculated the CVA achieving a lower level than CVA previously used by the bank. This allows a reduction of capital requirements for banks.

  1. Mitochondrial respiration is sensitive to cytoarchitectural breakdown.

    Science.gov (United States)

    Kandel, Judith; Angelin, Alessia A; Wallace, Douglas C; Eckmann, David M

    2016-11-07

    An abundance of research suggests that cellular mitochondrial and cytoskeletal disruption are related, but few studies have directly investigated causative connections between the two. We previously demonstrated that inhibiting microtubule and microfilament polymerization affects mitochondrial motility on the whole-cell level in fibroblasts. Since mitochondrial motility can be indicative of mitochondrial function, we now further characterize the effects of these cytoskeletal inhibitors on mitochondrial potential, morphology and respiration. We found that although they did not reduce mitochondrial inner membrane potential, cytoskeletal toxins induced significant decreases in basal mitochondrial respiration. In some cases, basal respiration was only affected after cells were pretreated with the calcium ionophore A23187 in order to stress mitochondrial function. In most cases, mitochondrial morphology remained unaffected, but extreme microfilament depolymerization or combined intermediate doses of microtubule and microfilament toxins resulted in decreased mitochondrial lengths. Interestingly, these two particular exposures did not affect mitochondrial respiration in cells not sensitized with A23187, indicating an interplay between mitochondrial morphology and respiration. In all cases, inducing maximal respiration diminished differences between control and experimental groups, suggesting that reduced basal respiration originates as a largely elective rather than pathological symptom of cytoskeletal impairment. However, viability experiments suggest that even this type of respiration decrease may be associated with cell death.

  2. Elemental Concentration of Inhalable and Respirable Particulate ...

    African Journals Online (AJOL)

    20537 and respirable foam for I.O.M sampler. The elemental composition (Co, Ni, Zn, Cu, Fe, Pb, Cr, Mn and Cd) were analyzed by using Atomic Absorption Spectrophotometric (AAS). The data generated were subjected to descriptive analysis. In inhalable fraction,the enrichment factor ranged from 1-73.3 while in respirable ...

  3. Respirators: APR Issuer Self Study 33461

    Energy Technology Data Exchange (ETDEWEB)

    Chochoms, Michael [Los Alamos National Laboratory

    2016-07-13

    Respirators: APR Issuer Self-Study (course 33461) is designed to introduce and familiarize employees selected as air-purifying respirator (APR) issuers at Los Alamos National Laboratory (LANL) with the responsibilities, limitations, procedures, and resources for issuing APRs at LANL. The goal is to enable these issuers to consistently provide proper, functioning APRs to authorized users

  4. Polynomial Chaos Expansion Approach to Interest Rate Models

    Directory of Open Access Journals (Sweden)

    Luca Di Persio

    2015-01-01

    Full Text Available The Polynomial Chaos Expansion (PCE technique allows us to recover a finite second-order random variable exploiting suitable linear combinations of orthogonal polynomials which are functions of a given stochastic quantity ξ, hence acting as a kind of random basis. The PCE methodology has been developed as a mathematically rigorous Uncertainty Quantification (UQ method which aims at providing reliable numerical estimates for some uncertain physical quantities defining the dynamic of certain engineering models and their related simulations. In the present paper, we use the PCE approach in order to analyze some equity and interest rate models. In particular, we take into consideration those models which are based on, for example, the Geometric Brownian Motion, the Vasicek model, and the CIR model. We present theoretical as well as related concrete numerical approximation results considering, without loss of generality, the one-dimensional case. We also provide both an efficiency study and an accuracy study of our approach by comparing its outputs with the ones obtained adopting the Monte Carlo approach, both in its standard and its enhanced version.

  5. An interval-valued reliability model with bounded failure rates

    DEFF Research Database (Denmark)

    Kozine, Igor; Krymsky, Victor

    2012-01-01

    The approach to deriving interval-valued reliability measures described in this paper is distinctive from other imprecise reliability models in that it overcomes the issue of having to impose an upper bound on time to failure. It rests on the presupposition that a constant interval-valued failure...... rate is known possibly along with other reliability measures, precise or imprecise. The Lagrange method is used to solve the constrained optimization problem to derive new reliability measures of interest. The obtained results call for an exponential-wise approximation of failure probability density...

  6. An Optimal Commitment Model of Exchange Rate Stabilization

    OpenAIRE

    Kyung-Soo Kim

    2006-01-01

    Recently East Asian countries that have amassed large US dollar reserves face a growing threat of big losses from a sudden decline in the dollar. This threat evokes an issue of the optimal commitment of exchange rate stabilization once raised by Isard (1995) who interpreted the cost of breaking the parity as the capital gain awarded to speculators, in the event the domestic currency is devalued. The only difference in this paper is revaluation. This paper models the central bank��s optima...

  7. Building a better methane generation model: Validating models with methane recovery rates from 35 Canadian landfills.

    Science.gov (United States)

    Thompson, Shirley; Sawyer, Jennifer; Bonam, Rathan; Valdivia, J E

    2009-07-01

    The German EPER, TNO, Belgium, LandGEM, and Scholl Canyon models for estimating methane production were compared to methane recovery rates for 35 Canadian landfills, assuming that 20% of emissions were not recovered. Two different fractions of degradable organic carbon (DOC(f)) were applied in all models. Most models performed better when the DOC(f) was 0.5 compared to 0.77. The Belgium, Scholl Canyon, and LandGEM version 2.01 models produced the best results of the existing models with respective mean absolute errors compared to methane generation rates (recovery rates + 20%) of 91%, 71%, and 89% at 0.50 DOC(f) and 171%, 115%, and 81% at 0.77 DOC(f). The Scholl Canyon model typically overestimated methane recovery rates and the LandGEM version 2.01 model, which modifies the Scholl Canyon model by dividing waste by 10, consistently underestimated methane recovery rates; this comparison suggested that modifying the divisor for waste in the Scholl Canyon model between one and ten could improve its accuracy. At 0.50 DOC(f) and 0.77 DOC(f) the modified model had the lowest absolute mean error when divided by 1.5 yielding 63 +/- 45% and 2.3 yielding 57 +/- 47%, respectively. These modified models reduced error and variability substantially and both have a strong correlation of r = 0.92.

  8. Inhibiting prenylation augments chemotherapy efficacy in renal cell carcinoma through dual inhibition on mitochondrial respiration and glycolysis.

    Science.gov (United States)

    Huang, Jiangrong; Yang, Xiaoyu; Peng, Xiaochun; Huang, Wei

    2017-11-18

    Prenylation is a posttranslational lipid modification required for the proper functions of a number of proteins involved in cell regulation. Here, we show that prenylation inhibition is important for renal cell carcinoma (RCC) growth, survival and response to chemotherapy, and its underlying mechanism may be contributed to mitochondrial dysfunction. We first demonstrated that a HMG-CoA reductase inhibitor pitavastatin inhibited mevalonate pathway and thereby prenylation in RCC cells. In addition, pitavastatin is effective in inhibiting growth and inducing apoptosis in a panel of RCC cell lines. Combination of pitavastatin and paclitaxel is significantly more effective than pitavastatin or paclitaxel alone as shown by both in vitro cell culture system and in vivo RCC xenograft model. Importantly, pitavastatin treatment inhibits mitochondrial respiration via suppressing mitochondrial complex I and II enzyme activities. Interestingly, different from mitochondrial inhibitor phenformin that inhibits mitochondrial respiration but activates glycolytic rate in RCC cells, pitavastatin significantly decreases glycolytic rate. The dual inhibitory action of pitavastatin on mitochondrial respiration and glycolysis results in remarkable energy depletion and oxidative stress in RCC cells. In addition, inhibition of prenylation by depleting Isoprenylcysteine carboxylmethyltransferase (Icmt) also mimics the inhibitory effects of pitavastatin in RCC cells. Our work demonstrates the previously unappreciated association between prenylation inhibition and energy metabolism in RCC, which can be therapeutically exploited, likely in tumors that largely rely on energy metabolism. Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Effects of cadmium, zinc, lead, and mercury on respiration and fermentation of Saccharomyces cerevisiae

    Energy Technology Data Exchange (ETDEWEB)

    Grafl, H J; Schwantes, H O

    1983-01-01

    Zinc and lead did not affect the rate of respiration and fermentation. Concentrations of cadmium higher than 10/sup -7/ M and concentrations of mercury higher than 5 x 10/sup -5/ M significantly reduced the O/sub 2/ consumption and the CO/sub 2/ production. 10/sup -2/ M cadmium and 10/sup -3/ M mercury completely inhibited respiration and fermentation. Low concentrations of mercury inhibited respiration irreversibly and fermentation reversibly. High concentrations of zinc reduced the toxicity of low concentrations of cadmium but they enhanced the effects of high concentrations of cadmium and mercury. No interactions between lead and the other tested heavy metals were observed.

  10. Interest rate modeling post-crisis challenges and approaches

    CERN Document Server

    Grbac, Zorana

    2015-01-01

    Filling a gap in the literature caused by the recent financial crisis, this book provides a treatment of the techniques needed to model and evaluate interest rate derivatives according to the new paradigm for fixed income markets. Concerning this new development, there presently exist only research articles and two books, one of them an edited volume, both being written by researchers working mainly in practice. The aim of this book is to concentrate primarily on the methodological side, thereby providing an overview of the state-of-the-art and also clarifying the link between the new models and the classical literature. The book is intended to serve as a guide for graduate students and researchers as well as practitioners interested in the paradigm change for fixed income markets. A basic knowledge of fixed income markets and related stochastic methodology is assumed as a prerequisite.

  11. A microscopic model of rate and state friction evolution

    Science.gov (United States)

    Li, Tianyi; Rubin, Allan M.

    2017-08-01

    Whether rate- and state-dependent friction evolution is primarily slip dependent or time dependent is not well resolved. Although slide-hold-slide experiments are traditionally interpreted as supporting the aging law, implying time-dependent evolution, recent studies show that this evidence is equivocal. In contrast, the slip law yields extremely good fits to velocity step experiments, although a clear physical picture for slip-dependent friction evolution is lacking. We propose a new microscopic model for rate and state friction evolution in which each asperity has a heterogeneous strength, with individual portions recording the velocity at which they became part of the contact. Assuming an exponential distribution of asperity sizes on the surface, the model produces results essentially similar to the slip law, yielding very good fits to velocity step experiments but not improving much the fits to slide-hold-slide experiments. A numerical kernel for the model is developed, and an analytical expression is obtained for perfect velocity steps, which differs from the slip law expression by a slow-decaying factor. By changing the quantity that determines the intrinsic strength, we use the same model structure to investigate aging-law-like time-dependent evolution. Assuming strength to increase logarithmically with contact age, for two different definitions of age we obtain results for velocity step increases significantly different from the aging law. Interestingly, a solution very close to the aging law is obtained if we apply a third definition of age that we consider to be nonphysical. This suggests that under the current aging law, the state variable is not synonymous with contact age.

  12. Contributions of ectomycorrhizal fungal mats to forest soil respiration

    Science.gov (United States)

    C. Phillips; L.A. Kluber; J.P. Martin; B.A. Caldwell; B.J. Bond

    2012-01-01

    Distinct aggregations of fungal hyphae and rhizomorphs, or “mats”, formed by some genera of ectomycorrhizal (EcM) fungi are common features of soils in coniferous forests of the Pacific Northwest. We measured in situ respiration rates of Piloderma mats and neighboring non-mat soils in an old-growth Douglas-fir forest in western Oregon to investigate whether there was...

  13. Oxygen dependence of respiration in rat spinotrapezius muscle in situ

    OpenAIRE

    Golub, Aleksander S.; Pittman, Roland N.

    2012-01-01

    The oxygen dependence of respiration in striated muscle in situ was studied by measuring the rate of decrease of interstitial Po2 [oxygen disappearance curve (ODC)] following rapid arrest of blood flow by pneumatic tissue compression, which ejected red blood cells from the muscle vessels and made the ODC independent from oxygen bound to hemoglobin. After the contribution of photo-consumption of oxygen by the method was evaluated and accounted for, the corrected ODCs were converted into the Po...

  14. Influence of vestibular activation on respiration in humans

    Science.gov (United States)

    Monahan, Kevin D.; Sharpe, Melissa K.; Drury, Daniel; Ertl, Andrew C.; Ray, Chester A.

    2002-01-01

    The purpose of this study was to determine the effects of the semicircular canals and otolith organs on respiration in humans. On the basis of animal studies, we hypothesized that vestibular activation would elicit a vestibulorespiratory reflex. To test this hypothesis, respiratory measures, arterial blood pressure, and heart rate were measured during engagement of semicircular canals and/or otolith organs. Dynamic upright pitch and roll (15 cycles/min), which activate the otolith organs and semicircular canals, increased respiratory rate (Delta2 +/- 1 and Delta3 +/- 1 breaths/min, respectively; P < 0.05). Dynamic yaw and lateral pitch (15 cycles/min), which activate the semicircular canals, increased respiration similarly (Delta3 +/- 1 and Delta2 +/- 1, respectively; P < 0.05). Dynamic chair rotation (15 cycles/min), which mimics dynamic yaw but eliminates neck muscle afferent, increased respiration (Delta3 +/- 1; P < 0.05) comparable to dynamic yaw (15 cycles/min). Increases in respiratory rate were graded as greater responses occurred during upright (Delta5 +/- 2 breaths/min) and lateral pitch (Delta4 +/- 1) and roll (Delta5 +/- 1) performed at 30 cycles/min. Increases in breathing frequency resulted in increases in minute ventilation during most interventions. Static head-down rotation, which activates otolith organs, did not alter respiratory rate (Delta1 +/- 1 breaths/min). Collectively, these data indicate that semicircular canals, but not otolith organs or neck muscle afferents, mediate increased ventilation in humans and support the concept that vestibular activation alters respiration in humans.

  15. Effects of low concentrations of sulfur dioxide on net photosynthesis and dark respiration of Vicia faba

    Energy Technology Data Exchange (ETDEWEB)

    Black, V J; Unsworth, M H

    1979-01-01

    Rates of net photosynthesis, P/sub N/, and dark respiration of Vicia faba plants were measured in the laboratory in clean air and in air containing up to 175 parts 10/sup -9/ (500 ..mu..g m/sup -3/) SO/sub 2/. At all SO/sub 2/ concentrations exceeding 35 parts 10/sup -9/, P/sub N/ was inhibited compared with clean air. At light saturation, the magnitude of inhibition depended on SO/sub 2/ concentration but at low irradiances the inhibition was independent of concentration. Dark respiration rates increased substantially, independent of concentration. When exposures continued for up to 3 days, P/sub N/ returned to clean air values about 1 h after fumigation ceased: dark respiration recovered after one photoperiod. There were no visible injuries. Reviewing possible mechanisms responsible for the inhibition of P/sub N/, it is suggested that SO/sub 2/ competes with CO/sub 2/ for binding sites in RuBP carboxylase. Analysis of resistance analogues demonstrates that SO/sub 2/ altered both stomatal and internal (residual) resistances. A model of crop photosynthesis shows the implications of the observed responses for the growth of field crops in which plants are assumed to respond like laboratory plants. Photosynthesis of the crop would be less sensitive than that of individual plants to SO/sub 2/ concentration. Daily dry matter accumulation of hypothetical polluted crops would be substantially less than clean air values but would vary relatively little with SO/sub 2/ concentration. It is concluded that physiological bases exist to account for observed reductions in growth of plants at very low SO/sub 2/ concentrations, and that thresholds for plant responses to SO/sub 2/ require reassessment. 30 references, 5 figures, 1 table.

  16. Soil Respiration of Three Mangrove Forests on Sanibel Island, Florida

    Science.gov (United States)

    Cartwright, F.; Bovard, B. D.

    2011-12-01

    Carbon cycling studies conducted in mangrove forests have typically focused on aboveground processes. Our understanding of carbon storage in these systems is therefore limited by the lack information on belowground processes such as fine root production and soil respiration. To our knowledge there exist no studies investigating temporal patterns in and environmental controls on soil respiration in multiple types of mangrove ecosystems concurrently. This study is part of a larger study on carbon storage in three mangrove forests on Sanibel Island, Florida. Here we report on eight months of soil respiration data within these forests that will ultimately be incorporated into an annual carbon budget for each habitat type. Soil respiration was monitored in the following three mangrove habitat types: a fringe mangrove forest dominated by Rhizophora mangle, a basin mangrove forest dominated by Avicennia germinans, and a higher elevation forest comprised of a mix of Avicennia germinans and Laguncularia racemosa, and non-woody salt marsh species. Beginning in June of 2010, we measured soil emissions of carbon dioxide at 5 random locations within three-100 m2 plots within each habitat type. Sampling was performed at monthly intervals and conducted over the course of three days. For each day, one plot from each habitat type was measured. In addition to soil respiration, soil temperature, salinity and gravimetric moisture content were also measured. Our data indicate the Black mangrove forest, dominated by Avicennia germinans, experiences the highest rates of soil respiration with a mean rate of 4.61 ± 0.60 μmol CO2 m-2 s-1. The mixed mangrove and salt marsh habitat has the lowest soil carbon emission rates with a mean of 2.78 ± 0.40 μmol CO2 m-2 s-1. Soil carbon effluxes appear to peak in the early part of the wet season around May to June and are lower and relatively constant the remainder of the year. Our data also suggest there are important but brief periods where

  17. Modelling hourly rates of evaporation from small lakes

    Directory of Open Access Journals (Sweden)

    R. J. Granger

    2011-01-01

    Full Text Available The paper presents the results of a field study of open water evaporation carried out on three small lakes in Western and Northern Canada. In this case small lakes are defined as those for which the temperature above the water surface is governed by the upwind land surface conditions; that is, a continuous boundary layer exists over the lake, and large-scale atmospheric effects such as entrainment do not come into play. Lake evaporation was measured directly using eddy covariance equipment; profiles of wind speed, air temperature and humidity were also obtained over the water surfaces. Observations were made as well over the upwind land surface.

    The major factors controlling open water evaporation were examined. The study showed that for time periods shorter than daily, the open water evaporation bears no relationship to the net radiation; the wind speed is the most significant factor governing the evaporation rates, followed by the land-water temperature contrast and the land-water vapour pressure contrast. The effect of the stability on the wind field was demonstrated; relationships were developed relating the land-water wind speed contrast to the land-water temperature contrast. The open water period can be separated into two distinct evaporative regimes: the warming period in the Spring, when the land is warmer than the water, the turbulent fluxes over water are suppressed; and the cooling period, when the water is warmer than the land, the turbulent fluxes over water are enhanced.

    Relationships were developed between the hourly rates of lake evaporation and the following significant variables and parameters (wind speed, land-lake temperature and humidity contrasts, and the downwind distance from shore. The result is a relatively simple versatile model for estimating the hourly lake evaporation rates. The model was tested using two independent data sets. Results show that the modelled evaporation follows the observed values

  18. Estimating respiration of roots in soil: interactions with soil CO2, soil temperature and soil water content

    NARCIS (Netherlands)

    Bouma, T.J.; Nielsen, K.F.; Eissenstat, D.M.; Lynch, J.P.

    1997-01-01

    Little information is available on the variability of the dynamics of the actual and observed root respiration rate in relation to abiotic factors. In this study, we describe I) interactions between soil CO2 concentration, temperature, soil water content and root respiration, and II) the effect of

  19. Respiration of midges (Diptera; Chironomidae) in British Columbian lakes: oxy-regulation, temperature and their role as palaeo-indicators

    DEFF Research Database (Denmark)

    Brodersen, Klaus Peter; Pedersen, Ole; Walker, Ian R.

    2008-01-01

    1. The specific respiration rate of 13 chironomid taxa and Chaoborus were measured to test the hypothesis of the relation between a species' ability to regulate their oxygen uptake and their distributional patterns among nine study lakes in British Columbia, Canada. 2. Respiration patterns of ind...

  20. Impact of the reg1 mutation glycocen accumulation and glucose consumption rates in Saccharomyces cerevisiae cells based on a macrokinetic model

    Directory of Open Access Journals (Sweden)

    Rocha-Leão M.H.M.

    2003-01-01

    Full Text Available In S. cerevisiae, catabolite repression controls glycogen accumulation and glucose consumption. Glycogen is responsible for stress resistance, and its accumulation in derepression conditions results in a yeast with good quality. In yeast cells, catabolite repression also named glucose effect takes place at the transcriptional levels, decreasing enzyme respiration and causing the cells to enter a fermentative metabolism, low cell mass yield and yeast with poor quality. Since glucose is always present in molasses the glucose effect occurs in industrial media. A quantitative characterization of cell growth, substrate consumption and glycogen formation was undertaken based on an unstructured macrokinetic model for a reg1/hex2 mutant, capable of the respiration while growing on glucose, and its isogenic repressible strain (REG1/HEX2. The results show that the estimated value to maximum specific glycogen accumulation rate (muG,MAX is eight times greater in the reg1/hex2 mutant than its isogenic strain, and the glucose affinity constant (K SS is fifth times greater in reg1/hex2 mutant than in its isogenic strain with less glucose uptake by the former channeling glucose into cell mass growth and glycogen accumulation simultaneously. This approach may be one more tool to improve the glucose removal in yeast production. Thus, disruption of the REG1/HEX2 gene may constitute an important strategy for producing commercial yeast.

  1. Glucose, Lactate and Glutamine but not Glutamate Support Depolarization-Induced Increased Respiration in Isolated Nerve Terminals

    DEFF Research Database (Denmark)

    Hohnholt, Michaela C; Andersen, Vibe H; Bak, Lasse K

    2017-01-01

    Synaptosomes prepared from various aged and gene modified experimental animals constitute a valuable model system to study pre-synaptic mechanisms. Synaptosomes were isolated from whole brain and the XFe96 extracellular flux analyzer (Seahorse Bioscience) was used to study mitochondrial respiration...... and antimycin A. The synaptosomes exhibited intense respiratory activity using glucose as substrate. The FCCP-dependent respiration was significantly higher with 10 mM glucose compared to 1 mM glucose. Synaptosomes also readily used pyruvate as substrate, which elevated basal respiration, activity......-dependent respiration induced by veratridine and the respiratory response to uncoupling compared to that obtained with glucose as substrate. Also lactate was used as substrate by synaptosomes but in contrast to pyruvate, mitochondrial lactate mediated respiration was comparable to respiration using glucose as substrate...

  2. Convergence in the temperature response of leaf respiration across biomes and plant functional types.

    Science.gov (United States)

    Heskel, Mary A; O'Sullivan, Odhran S; Reich, Peter B; Tjoelker, Mark G; Weerasinghe, Lasantha K; Penillard, Aurore; Egerton, John J G; Creek, Danielle; Bloomfield, Keith J; Xiang, Jen; Sinca, Felipe; Stangl, Zsofia R; Martinez-de la Torre, Alberto; Griffin, Kevin L; Huntingford, Chris; Hurry, Vaughan; Meir, Patrick; Turnbull, Matthew H; Atkin, Owen K

    2016-04-05

    Plant respiration constitutes a massive carbon flux to the atmosphere, and a major control on the evolution of the global carbon cycle. It therefore has the potential to modulate levels of climate change due to the human burning of fossil fuels. Neither current physiological nor terrestrial biosphere models adequately describe its short-term temperature response, and even minor differences in the shape of the response curve can significantly impact estimates of ecosystem carbon release and/or storage. Given this, it is critical to establish whether there are predictable patterns in the shape of the respiration-temperature response curve, and thus in the intrinsic temperature sensitivity of respiration across the globe. Analyzing measurements in a comprehensive database for 231 species spanning 7 biomes, we demonstrate that temperature-dependent increases in leaf respiration do not follow a commonly used exponential function. Instead, we find a decelerating function as leaves warm, reflecting a declining sensitivity to higher temperatures that is remarkably uniform across all biomes and plant functional types. Such convergence in the temperature sensitivity of leaf respiration suggests that there are universally applicable controls on the temperature response of plant energy metabolism, such that a single new function can predict the temperature dependence of leaf respiration for global vegetation. This simple function enables straightforward description of plant respiration in the land-surface components of coupled earth system models. Our cross-biome analyses shows significant implications for such fluxes in cold climates, generally projecting lower values compared with previous estimates.

  3. Classification of soil respiration in areas of sugarcane renewal using decision tree

    Directory of Open Access Journals (Sweden)

    Camila Viana Vieira Farhate

    Full Text Available ABSTRACT: The use of data mining is a promising alternative to predict soil respiration from correlated variables. Our objective was to build a model using variable selection and decision tree induction to predict different levels of soil respiration, taking into account physical, chemical and microbiological variables of soil as well as precipitation in renewal of sugarcane areas. The original dataset was composed of 19 variables (18 independent variables and one dependent (or response variable. The variable-target refers to soil respiration as the target classification. Due to a large number of variables, a procedure for variable selection was conducted to remove those with low correlation with the variable-target. For that purpose, four approaches of variable selection were evaluated: no variable selection, correlation-based feature selection (CFS, chisquare method (χ2 and Wrapper. To classify soil respiration, we used the decision tree induction technique available in the Weka software package. Our results showed that data mining techniques allow the development of a model for soil respiration classification with accuracy of 81 %, resulting in a knowledge base composed of 27 rules for prediction of soil respiration. In particular, the wrapper method for variable selection identified a subset of only five variables out of 18 available in the original dataset, and they had the following order of influence in determining soil respiration: soil temperature > precipitation > macroporosity > soil moisture > potential acidity.

  4. Soil respiration in different agricultural and natural ecosystems in an arid region.

    Directory of Open Access Journals (Sweden)

    Liming Lai

    Full Text Available The variation of different ecosystems on the terrestrial carbon balance is predicted to be large. We investigated a typical arid region with widespread saline/alkaline soils, and evaluated soil respiration of different agricultural and natural ecosystems. Soil respiration for five ecosystems together with soil temperature, soil moisture, soil pH, soil electric conductivity and soil organic carbon content were investigated in the field. Comparing with the natural ecosystems, the mean seasonal soil respiration rates of the agricultural ecosystems were 96%-386% higher and agricultural ecosystems exhibited lower CO(2 absorption by the saline/alkaline soil. Soil temperature and moisture together explained 48%, 86%, 84%, 54% and 54% of the seasonal variations of soil respiration in the five ecosystems, respectively. There was a significant negative relationship between soil respiration and soil electrical conductivity, but a weak correlation between soil respiration and soil pH or soil organic carbon content. Our results showed that soil CO(2 emissions were significantly different among different agricultural and natural ecosystems, although we caution that this was an observational, not manipulative, study. Temperature at the soil surface and electric conductivity were the main driving factors of soil respiration across the five ecosystems. Care should be taken when converting native vegetation into cropland from the point of view of greenhouse gas emissions.

  5. Soil respiration in different agricultural and natural ecosystems in an arid region.

    Science.gov (United States)

    Lai, Liming; Zhao, Xuechun; Jiang, Lianhe; Wang, Yongji; Luo, Liangguo; Zheng, Yuanrun; Chen, Xi; Rimmington, Glyn M

    2012-01-01

    The variation of different ecosystems on the terrestrial carbon balance is predicted to be large. We investigated a typical arid region with widespread saline/alkaline soils, and evaluated soil respiration of different agricultural and natural ecosystems. Soil respiration for five ecosystems together with soil temperature, soil moisture, soil pH, soil electric conductivity and soil organic carbon content were investigated in the field. Comparing with the natural ecosystems, the mean seasonal soil respiration rates of the agricultural ecosystems were 96%-386% higher and agricultural ecosystems exhibited lower CO(2) absorption by the saline/alkaline soil. Soil temperature and moisture together explained 48%, 86%, 84%, 54% and 54% of the seasonal variations of soil respiration in the five ecosystems, respectively. There was a significant negative relationship between soil respiration and soil electrical conductivity, but a weak correlation between soil respiration and soil pH or soil organic carbon content. Our results showed that soil CO(2) emissions were significantly different among different agricultural and natural ecosystems, although we caution that this was an observational, not manipulative, study. Temperature at the soil surface and electric conductivity were the main driving factors of soil respiration across the five ecosystems. Care should be taken when converting native vegetation into cropland from the point of view of greenhouse gas emissions.

  6. Arbuscular mycorrhizal fungi regulate soil respiration and its response to precipitation change in a semiarid steppe.

    Science.gov (United States)

    Zhang, Bingwei; Li, Shan; Chen, Shiping; Ren, Tingting; Yang, Zhiqiang; Zhao, Hanlin; Liang, Yu; Han, Xingguo

    2016-01-28

    Arbuscular mycorrhizal fungi (AMF) are critical links in plant-soil continuum and play a critical role in soil carbon cycles. Soil respiration, one of the largest carbon fluxes in global carbon cycle, is sensitive to precipitation change in semiarid ecosystems. In this study, a field experiment with fungicide application and water addition was conducted during 2010-2013 in a semiarid steppe in Inner Mongolia, China, and soil respiration was continuously measured to investigate the influences of AMF on soil respiration under different precipitation regimes. Results showed that soil respiration was promoted by water addition treatment especially during drought seasons, which induced a nonlinear response of soil respiration to precipitation change. Fungicide application suppressed AMF root colonization without impacts on soil microbes. AMF suppression treatment accelerated soil respiration with 2.7, 28.5 and 37.6 g C m(-2) across three seasons, which were mainly caused by the enhanced heterotrophic component. A steeper response of soil respiration rate to precipitation was found under fungicide application treatments, suggesting a greater dampening effect of AMF on soil carbon release as water availability increased. Our study highlighted the importance of AMF on soil carbon stabilization and sequestration in semiarid steppe ecosystems especially during wet seasons.

  7. Arbuscular mycorrhizal fungi regulate soil respiration and its response to precipitation change in a semiarid steppe

    Science.gov (United States)

    Zhang, Bingwei; Li, Shan; Chen, Shiping; Ren, Tingting; Yang, Zhiqiang; Zhao, Hanlin; Liang, Yu; Han, Xingguo

    2016-01-01

    Arbuscular mycorrhizal fungi (AMF) are critical links in plant-soil continuum and play a critical role in soil carbon cycles. Soil respiration, one of the largest carbon fluxes in global carbon cycle, is sensitive to precipitation change in semiarid ecosystems. In this study, a field experiment with fungicide application and water addition was conducted during 2010-2013 in a semiarid steppe in Inner Mongolia, China, and soil respiration was continuously measured to investigate the influences of AMF on soil respiration under different precipitation regimes. Results showed that soil respiration was promoted by water addition treatment especially during drought seasons, which induced a nonlinear response of soil respiration to precipitation change. Fungicide application suppressed AMF root colonization without impacts on soil microbes. AMF suppression treatment accelerated soil respiration with 2.7, 28.5 and 37.6 g C m-2 across three seasons, which were mainly caused by the enhanced heterotrophic component. A steeper response of soil respiration rate to precipitation was found under fungicide application treatments, suggesting a greater dampening effect of AMF on soil carbon release as water availability increased. Our study highlighted the importance of AMF on soil carbon stabilization and sequestration in semiarid steppe ecosystems especially during wet seasons.

  8. On the relative roles of hydrology, salinity, temperature, and root productivity in controlling soil respiration from coastal swamps (freshwater)

    Science.gov (United States)

    Krauss, Ken W.; Whitbeck, Julie L.; Howard, Rebecca J.

    2012-01-01

    Background and aims Soil CO2 emissions can dominate gaseous carbon losses from forested wetlands (swamps), especially those positioned in coastal environments. Understanding the varied roles of hydroperiod, salinity, temperature, and root productivity on soil respiration is important in discerning how carbon balances may shift as freshwater swamps retreat inland with sea-level rise and salinity incursion, and convert to mixed communities with marsh plants. Methods We exposed soil mesocosms to combinations of permanent flooding, tide, and salinity, and tracked soil respiration over 2 1/2 growing seasons. We also related these measurements to rates from field sites along the lower Savannah River, Georgia, USA. Soil temperature and root productivity were assessed simultaneously for both experiments. Results Soil respiration from mesocosms (22.7-1678.2 mg CO2 m-2 h-1) differed significantly among treatments during four of the seven sampling intervals, where permanently flooded treatments contributed to low rates of soil respiration and tidally flooded treatments sometimes contributed to higher rates. Permanent flooding reduced the overall capacity for soil respiration as soils warmed. Salinity did reduce soil respiration at times in tidal treatments, indicating that salinity may affect the amount of CO2 respired with tide more strongly than under permanent flooding. However, soil respiration related greatest to root biomass (mesocosm) and standing root length (field); any stress reducing root productivity (incl. salinity and permanent flooding) therefore reduces soil respiration. Conclusions Overall, we hypothesized a stronger, direct role for salinity on soil respiration, and found that salinity effects were being masked by varied capacities for increases in respiration with soil warming as dictated by hydrology, and the indirect influence that salinity can have on plant productivity.

  9. Modeling and Model Predictive Power and Rate Control of Wireless Communication Networks

    Directory of Open Access Journals (Sweden)

    Cunwu Han

    2014-01-01

    Full Text Available A novel power and rate control system model for wireless communication networks is presented, which includes uncertainties, input constraints, and time-varying delays in both state and control input. A robust delay-dependent model predictive power and rate control method is proposed, and the state feedback control law is obtained by solving an optimization problem that is derived by using linear matrix inequality (LMI techniques. Simulation results are given to illustrate the effectiveness of the proposed method.

  10. Incorporating a Time Horizon in Rate-of-Return Estimations: Discounted Cash Flow Model in Electric Transmission Rate Cases

    International Nuclear Information System (INIS)

    Chatterjee, Bishu; Sharp, Peter A.

    2006-01-01

    Electric transmission and other rate cases use a form of the discounted cash flow model with a single long-term growth rate to estimate rates of return on equity. It cannot incorporate information about the appropriate time horizon for which analysts' estimates of earnings growth have predictive powers. Only a non-constant growth model can explicitly recognize the importance of the time horizon in an ROE calculation. (author)

  11. Volatility modeling for IDR exchange rate through APARCH model with student-t distribution

    Science.gov (United States)

    Nugroho, Didit Budi; Susanto, Bambang

    2017-08-01

    The aim of this study is to empirically investigate the performance of APARCH(1,1) volatility model with the Student-t error distribution on five foreign currency selling rates to Indonesian rupiah (IDR), including the Swiss franc (CHF), the Euro (EUR), the British pound (GBP), Japanese yen (JPY), and the US dollar (USD). Six years daily closing rates over the period of January 2010 to December 2016 for a total number of 1722 observations have analysed. The Bayesian inference using the efficient independence chain Metropolis-Hastings and adaptive random walk Metropolis methods in the Markov chain Monte Carlo (MCMC) scheme has been applied to estimate the parameters of model. According to the DIC criterion, this study has found that the APARCH(1,1) model under Student-t distribution is a better fit than the model under normal distribution for any observed rate return series. The 95% highest posterior density interval suggested the APARCH models to model the IDR/JPY and IDR/USD volatilities. In particular, the IDR/JPY and IDR/USD data, respectively, have significant negative and positive leverage effect in the rate returns. Meanwhile, the optimal power coefficient of volatility has been found to be statistically different from 2 in adopting all rate return series, save the IDR/EUR rate return series.

  12. Empirical rate equation model and rate calculations of hydrogen generation for Hanford tank waste

    International Nuclear Information System (INIS)

    HU, T.A.

    1999-01-01

    Empirical rate equations are derived to estimate hydrogen generation based on chemical reactions, radiolysis of water and organic compounds, and corrosion processes. A comparison of the generation rates observed in the field with the rates calculated for twenty eight tanks shows agreement within a factor of two to three

  13. Internal respiration of Amazon tree stems greatly exceeds external CO2 efflux

    Directory of Open Access Journals (Sweden)

    J. Q. Chambers

    2012-12-01

    Full Text Available Respiration in tree stems is an important component of forest carbon balance. The rate of CO2 efflux from the stem has often been assumed to be a measure of stem respiration. However, recent work in temperate forests has demonstrated that stem CO2 efflux can either overestimate or underestimate respiration rate because of emission or removal of CO2 by transport in xylem water. Here, we studied gas exchange from stems of tropical forest trees using a new approach to better understand respiration in an ecosystem that plays a key role in the global carbon cycle. Our main questions were (1 is internal CO2 transport important in tropical trees, and, if so, (2 does this transport result in net release of CO2 respired in the roots at the stem, or does it cause the opposite effect of net removal of stem-respired CO2? To answer these questions, we measured the ratio of stem CO2 efflux to O2 influx. This ratio, defined here as apparent respiratory quotient (ARQ, is expected to equal 1.0 if carbohydrates are the substrate for respiration, and the net transport of CO2 in the xylem water is negligible. Using a stem chamber approach to quantifying ARQ, we found values of 0.66 ± 0.18. These low ARQ values indicate that a large portion of respired CO2 (~ 35% is not emitted locally, and is probably transported upward in the stem. ARQ values of 0.21 ± 0.10 were found for the steady-state gas concentration within the stem, sampled by in-stem equilibration probes. These lower values may result from the proximity to the xylem water stream. In contrast, we found ARQ values of 1.00 ± 0.13 for soil respiration. Our results indicate the existence of a considerable internal flux of CO2 in the stems of tropical trees. If the transported CO2 is used in the canopy as a substrate for photosynthesis, it could account for up to 10% of the C fixed by the tree, and perhaps serve as a mechanism that buffers the response of the tree to changing CO2 levels. Our results also

  14. Coordinate regulation of cytochrome and alternative pathway respiration in tobacco.

    Science.gov (United States)

    Vanlerberghe, G C; McIntosh, L

    1992-12-01

    In suspension cells of NT1 tobacco (Nicotiana tabacum L. cv bright yellow), inhibition of the cytochrome pathway of respiration with antimycin A induced a large increase in the capacity of the alternative pathway over a period of approximately 12 h, as confirmed in both whole cells and isolated mitochondria. The increase in alternative pathway capacity required de novo RNA and protein synthesis and correlated closely with the increase of a 35-kD alternative oxidase protein. When the cytochrome pathway of intact cells was inhibited by antimycin A, respiration proceeded exclusively through the alternative pathway, reached rates significantly higher than before antimycin A addition, and was not stimulated by p-trifluoromethoxycarbonylcyanide (FCCP). When inhibition of the cytochrome pathway was relieved, alternative pathway capacity and the level of the 35-kD alternative oxidase protein declined. Respiration rate also declined and could once again be stimulated by FCCP. These observations show that the capacities of the mitochondrial electron transport pathways can be regulated in a coordinate fashion.

  15. [Effects of antimicrobial drugs on soil microbial respiration].

    Science.gov (United States)

    Liu, Feng; Ying, Guang-Guo; Zhou, Qi-Xing; Tao, Ran; Su, Hao-Chang; Li, Xu

    2009-05-15

    The effects on soil microbial respiration of sulfonamides, tetracyclines, macrolides and so on were studied using the direct absorption method. The results show sulfamethazine, sulfamethoxazole, chlortetracycline, tetracycline, tylosin and trimethoprim inhibit soil respiration 34.33%, 34.43%, 2.71%, 3.08%, 7.13%, 38.08% respectively. Sulfamethoxazole and trimethoprim have the highest inhibition rates among all the antibiotics. In early incubation period (0-2 d), the concentrations above 10 mg x kg(-1) of sulfamethazine, sulfamethoxazole and trimethoprim remarkably decrease soil CO2 emission. The effects of these antibiotics vary with their concentrations too. Sulfamethoxazole and trimethoprim show good dose-response relationships. According to the standard of pesticide safety evaluation protocol, the six antibiotics pose a little risk to soil microbial environment.

  16. Annual ecosystem respiration budget for a Pinus sylvestris stand in central Siberia

    International Nuclear Information System (INIS)

    Shibistova, O.; Zrazhevskaya, G.; Astrakhantceva, N.; Shijneva, I.; Lloyd, J.; Arneth, A.; Kolle, J.; Knohl, A.; Schmerler, J.

    2002-01-01

    Using a ground-based and an above-canopy eddy covariance system in addition to stem respiration measurements, the annual respiratory fluxes attributable to soil, stems and foliage were determined for a Scots pine (Pinus sylvestris L.) forest growing in central Siberia. Night-time foliar respiration was estimated on the basis of the difference between fluxes measured below and above the canopy and the stem respiration measurements. Comparison of the effects of night-time turbulence on measured CO 2 fluxes showed flux loss above the canopy at low wind speeds, but no such effect was observed for the ground-based eddy system. This suggests that problems with flow homogeneity or flux divergence (both of which would be expected to be greater above the canopy than below) were responsible for above-canopy losses under these conditions. After correcting for this, a strong seasonality in foliar respiration was observed. This was not solely attributable to temperature variations, with intrinsic foliar respiratory capacities being much greater in spring and autumn. The opposite pattern was observed for stem respiration, with the intrinsic respiratory capacity being lower from autumn through early spring. Maximum respiratory activity was observed in early summer. This was not simply associated with a response to higher temperatures but seemed closely linked with cambial activity and the development of new xylem elements. Soil respiration rates exhibited an apparent high sensitivity to temperature, with seasonal data implying a Q 10 of about 7. We interpret this as reflecting covarying changes in soil microbial activity and soil temperatures throughout the snow-free season. Averaged over the two study years (1999 and 2000), the annual respiratory flux was estimated at 38.3 mol C/m 2 /a. Of this 0.61 was attributable to soil respiration, with stem respiration accounting for 0.21 and foliar respiration 0.18

  17. A Time-Frequency Respiration Tracking System using Non-Contact Bed Sensors with Harmonic Artifact Rejection

    Science.gov (United States)

    Beattie, Zachary T.; Jacobs, Peter G.; Riley, Thomas C.; Hagen, Chad C.

    2015-01-01

    Sleep apnea is a serious health condition that affects many individuals and has been associated with serious health conditions such as cardiovascular disease. Clinical diagnosis of sleep apnea requires that a patient spend the night in a sleep clinic while being wired up to numerous obtrusive sensors. We are developing a system that utilizes respiration rate and breathing amplitude inferred from non-contact bed sensors (i.e. load cells placed under bed supports) to detect sleep apnea. Multi-harmonic artifacts generated either biologically or as a result of the impulse response of the bed have made it challenging to track respiration rate and amplitude with high resolution in time. In this paper, we present an algorithm that can accurately track respiration on a second-by-second basis while removing noise harmonics. The algorithm is tested using data collected from 5 patients during overnight sleep studies. Respiration rate is compared with polysomnography estimations of respiration rate estimated by a technician following clinical standards. Results indicate that certain subjects exhibit a large harmonic component of their breathing signal that can be removed by our algorithm. When compared with technician transcribed respiration rates using polysomnography signals, we demonstrate improved accuracy of respiration rate tracking using harmonic artifact rejection (mean error: 0.18 breaths/minute) over tracking not using harmonic artifact rejection (mean error: −2.74 breaths/minute). PMID:26738176

  18. Effects of sensitizers on cell respiration. 3. The effects of hypoxic cell radiosensitizers on oxidative metabolism and the radiation response of an in vitro tumour model

    Energy Technology Data Exchange (ETDEWEB)

    Durand, R E [Wisconsin Clinical Cancer Center, Madison (USA). Dept. of Human Oncology; Biaglow, J E; Greenstock, C L

    1978-06-01

    Physiological factors are important when considering the effects of radiosensitizers on the radiation response of complex systems such as multi-cellular spheroids. In this system, under conditions of unlimited nutrient supply, cells are rendered hypoxic by metabolism. Thus, using the spheroid system as an in vitro model of the tumour-cell microenvironment, we have determined the relative contribution of radiosensitization and respiratory effects of a number of electron-affinic sensitizers having potential clinical use. These studies are indicative of physiological responses at the cellular level, and suggest optimal drug administration schemes for obtaining maximal radiation response in vivo with hypoxic cell sensitizers.

  19. Modeling the exchange rate of the euro against the dollar using the ARCH/GARCH models

    Directory of Open Access Journals (Sweden)

    Kovačević Radovan

    2016-01-01

    Full Text Available The analysis of time series with conditional heteroskedasticity (changeable time variability, conditional variance instability, the phenomenon called volatility is the main task of ARCH and GARCH models. The aim of these models is to calculate some of the volatility indicators needed for financial decisions. This paper examines the performance of generalized autoregressive conditional heteroscedasticity (GARCH model in modeling the daily changes of the log exchange rate of the euro against the dollar. Several GARCH models have been applied for modeling the daily log exchange rate returns of the euro, with a different number of parameters. The characteristic of estimated GARCH models is that the obtained coefficients of lagged squared residuals and the conditional variance parameters in the equation of conditional variance have a strong statistical significance. The sum of these two coefficients' estimates is close to a unit, which is typical for GARCH models that are applied on the data of financial assets returns. This means that the shocks in the conditional variance equation will be long lasting. The great value of the sum of these two coefficients shows that the high rates of positive or negative returns leads to a large forecasted value of the variance in the prolonged period. The asymmetrical EGARCH (1,1 model has showed the best results in modeling the euro exchange rate returns. The asymmetry term in the conditional variance equation of this model is negative and statistically significant. A negative value of this term suggests that the positive shock has less impact on the conditional variance than the negative shocks. The asymmetric EGARCH (1,1 model provides evidence of a leverage effect.

  20. Modeling gallic acid production rate by empirical and statistical analysis

    Directory of Open Access Journals (Sweden)

    Bratati Kar

    2000-01-01

    Full Text Available For predicting the rate of enzymatic reaction empirical correlation based on the experimental results obtained under various operating conditions have been developed. Models represent both the activation as well as deactivation conditions of enzymatic hydrolysis and the results have been analyzed by analysis of variance (ANOVA. The tannase activity was found maximum at incubation time 5 min, reaction temperature 40ºC, pH 4.0, initial enzyme concentration 0.12 v/v, initial substrate concentration 0.42 mg/ml, ionic strength 0.2 M and under these optimal conditions, the maximum rate of gallic acid production was 33.49 mumoles/ml/min.Para predizer a taxa das reações enzimaticas uma correlação empírica baseada nos resultados experimentais foi desenvolvida. Os modelos representam a ativação e a desativativação da hydrolise enzimatica. Os resultados foram avaliados pela análise de variança (ANOVA. A atividade máxima da tannase foi obtida após 5 minutos de incubação, temperatura 40ºC, pH 4,0, concentração inicial da enzima de 0,12 v/v, concentração inicial do substrato 0,42 mg/ml, força iônica 0,2 M. Sob essas condições a taxa máxima de produção ácido galico foi de 33,49 µmoles/ml/min.

  1. Separating rhizosphere respiration from total soil respiration in two larch plantations in northeastern China.

    Science.gov (United States)

    Jiang, Lifen; Shi, Fuchen; Li, Bo; Luo, Yiqi; Chen, Jiquan; Chen, Jiakuan

    2005-09-01

    The potential capacity of soil to sequester carbon in response to global warming is strongly regulated by the ratio of rhizosphere respiration to respiration by soil microbial decomposers, because of their different temperature sensitivities. To quantify relative contributions of rhizosphere respiration to total soil respiration as influenced by forest stand development, we conducted a trenching study in two larch (Larix gmelini (Rupr.) Rupr.) plantations, aged 17 and 31 years, in northeastern China. Four plots in each plantation were randomly selected and trenched in early May 2001. Soil surface CO2 effluxes both inside and outside the plots were measured from May 2001 to August 2002. Soil respiration (i.e., the CO2 effluxes outside the trenched plots) varied similarly in the two plantations from 0.8 micromol m(-2) s(-1) in winter to 6.0 micromol m(-2) s(-1) in summer. Rhizosphere respiration (i.e., CO2 efflux outside the trenched plots minus that inside the plots) varied from 0.2 to 2.0 micromol m(-2) s(-1) in the old forest and from 0.3 to 4.0 micromol m(-2) s(-1) in the young forest over the seasons. Rhizosphere respiration, on average, accounted for 25% of soil respiration in the old forest and 65% in the young forest. Rhizosphere and soil respiration were significantly correlated with soil temperature but not with soil water content. We conclude that the role forests play in regulating climate change may depend on their age.

  2. Partitioning autotrophic and heterotrophic respiration at Howland Forest

    Science.gov (United States)

    Carbone, Mariah; Hollinger, Dave; Davidson, Eric; Savage, Kathleen; Hughes, Holly

    2015-04-01

    Terrestrial ecosystem respiration is the combined flux of CO2 to the atmosphere from above- and below-ground, plant (autotrophic) and microbial (heterotrophic) sources. Flux measurements alone (e.g., from eddy covariance towers or soil chambers) cannot distinguish the contributions from these sources, which may change seasonally and respond differently to temperature and moisture. The development of improved process-based models that can predict how plants and microbes respond to changing environmental conditions (on seasonal, interannual, or decadal timescales) requires data from field observations and experiments to distinguish among these respiration sources. We tested the viability of partitioning of soil and ecosystem respiration into autotrophic and heterotrophic components with different approaches at the Howland Forest in central Maine, USA. These include an experimental manipulation using the classic root trenching approach and targeted ∆14CO2 measurements. For the isotopic measurements, we used a two-end member mass balance approach to determine the fraction of soil respiration from autotrophic and heterotrophic sources. When summed over the course of the growing season, the trenched chamber flux (heterotrophic) accounted for 53 ± 2% of the total control chamber flux. Over the four different 14C sampling periods, the heterotrophic component ranged from 35-55% and the autotrophic component ranges 45-65% of the total flux. Next steps will include assessing the value of the flux partitioning for constraining a simple ecosystem model using a model-data fusion approach to reduce uncertainties in estimates of NPP and simulation of future soil C stocks and fluxes.

  3. 42 CFR 84.134 - Respirator containers; minimum requirements.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 1 2010-10-01 2010-10-01 false Respirator containers; minimum requirements. 84.134... Respirators § 84.134 Respirator containers; minimum requirements. Supplied-air respirators shall be equipped with a substantial, durable container bearing markings which show the applicant's name, the type and...

  4. 42 CFR 84.197 - Respirator containers; minimum requirements.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 1 2010-10-01 2010-10-01 false Respirator containers; minimum requirements. 84.197... Cartridge Respirators § 84.197 Respirator containers; minimum requirements. Respirators shall be equipped with a substantial, durable container bearing markings which show the applicant's name, the type and...

  5. 42 CFR 84.174 - Respirator containers; minimum requirements.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 1 2010-10-01 2010-10-01 false Respirator containers; minimum requirements. 84.174... Air-Purifying Particulate Respirators § 84.174 Respirator containers; minimum requirements. (a) Except..., durable container bearing markings which show the applicant's name, the type of respirator it contains...

  6. Forest harvesting effects on soil temperature, moisture, and respiration in a bottomland hardwood forest

    International Nuclear Information System (INIS)

    Londo, A.J.; Messina, M.G.; Schoenholtz, S.H.

    1999-01-01

    The effect of forest disturbance on C cycling has become an issue, given concerns about escalating atmospheric C content. The authors examined the effects of harvest intensity on in situ and laboratory mineral soil respiration in an East Texas bottomland hardwood forest between 6 and 22 mo after harvesting. Treatments included a clearcut, a partial cut wherein approximately 58% of the basal area was removed, and an unharvested control. The soda-lime absorption technique was used for in situ respiration (CO 2 efflux) and the wet alkali method (NaOH) was used for laboratory mineral soil respiration. Soil temperature and moisture content were also measured. Harvesting significantly increased in situ respiration during most sampling periods. This effect was attributed to an increase in live root and microflora activity associated with postharvesting revegetation. In situ respiration increased exponentially (Q 10 relationship) as treatment soil temperatures increased, but followed a parabolic-type pattern through the range of soil moisture measured (mean range 10.4--31.5%). Mean rates of laboratory mineral soil respiration measured during the study were unaffected by cutting treatment for most sampling sessions. Overall, the mean rate of CO 2 efflux in the clearcuts was significantly higher than that in the partial cuts, which in turn was significantly higher than that in the controls. Mass balance estimates indicate that these treatment differences will have little or no long-term effect on C sequestration of these managed forests

  7. The Contribution of Old Carbon to Respiration from Alaskan Tundra Following Permafrost Thaw

    Science.gov (United States)

    Schuur, E. A.; Vogel, J. G.; Crummer, K. G.; Lee, H.; Sickman, J. O.; Dutta, K.

    2007-12-01

    More than 450 Pg of soil carbon (C) has accumulated in high latitude ecosystems after the retreat of the last major ice sheets. Recent studies suggest that, due to climate warming, these ecosystems may no longer be accumulating C, and in some cases may be losing stored C to the atmosphere. We used radiocarbon measurements of carbon dioxide to detect the age of C respired from tussock tundra near Denali National Park, Alaska. At this tundra site, permafrost has been observed to warm and thaw over the past several decades, causing the ground surface to subside as ice volume in the soil decreased. We established three sites within this area that differed in vegetation and surface topography; both characteristics varied in relation to the degree of permafrost thaw. We made radiocarbon measurements of ecosystem respiration, incubations of soil organic matter, and incubations of above and belowground plant biomass to determine the age and isotopic value of C respired from these sites. Over the study period from 2004 to 2006, ecosystem respiration radiocarbon values averaged from +35‰ to +95‰ in different months across sites. For soil incubations, surface soil radiocarbon was elevated relative both to ecosystem respiration and the current atmospheric radiocarbon value, demonstrating the significant contribution from C fixed over the past years to several decades. The deeper soil, in contrast, had respiration isotope values that averaged below zero, reflecting the significant effect of radioactive decay on the isotope content of deeper soil layers. The plant and soil incubations were combined in a multi- source mixing model to determine probable contributions from these different sources to ecosystem respiration. Deep soil respiration generally averaged between 5-15% of total ecosystem respiration, but reached as high as 40% in some months. When aggregated across the growing season, the two sites undergoing more disturbance from permafrost thaw had on average 2-3 times

  8. Soil respiration in typical plant communities in the wetland surrounding the high-salinity Ebinur Lake

    Science.gov (United States)

    Li, Yanhong; Zhao, Mingliang; Li, Fadong

    2018-03-01

    Soil respiration in wetlands surrounding lakes is a vital component of the soil carbon cycle in arid regions. However, information remains limited on the soil respiration around highly saline lakes during the plant growing season. Here, we aimed to evaluate diurnal and seasonal variation in soil respiration to elucidate the controlling factors in the wetland of Ebinur Lake, Xinjiang Uygur Autonomous Region, western China. We used a soil carbon flux automatic analyzer (LI-840A) to measure soil respiration rates during the growing season (April to November) in two fields covered by reeds and tamarisk and one field with no vegetation (bare soil) from 2015 to 2016. The results showed a single peak in the diurnal pattern of soil respiration from 11:00 to 17:00 for plots covered in reeds, tamarisk, and bare soil, with minimum values being detected from 03:00 to 07:00. During the growing season, the soil respiration of reeds and tamarisk peaked during the thriving period (4.16 and 3.75 mmol•m-2•s-1, respectively), while that of bare soil peaked during the intermediate growth period (0.74 mmol•m-2•s-1). The soil respiration in all three plots was lowest during the wintering period (0.08, 0.09, and-0.87 mmol•m-2•s-1, respectively). Air temperature and relative humidity significantly influenced soil respiration. A significant linear relationship was detected between soil respiration and soil temperature for reeds, tamarisk, and bare soil. The average Q10 of reeds and tamarisk were larger than that of bare soil. However, soil moisture content was not the main factor controlling soil respiration. Soil respiration was negatively correlated with soil pH and soil salinity in all three plot types. In contrast, soil respiration was positively correlated with organic carbon. Overall, CO2 emissions and greenhouse gases had a relatively weak effect on the wetlands surrounding the highly saline Ebinur Lake.

  9. [A comparative study on soil respiration between grazing and fenced typical Leymus chinensis steppe, Inner Mongolia].

    Science.gov (United States)

    Jia, Bingrui; Zhou, Guangsheng; Wang, Fengyu; Wang, Yuhui

    2004-09-01

    With enclosed chamber Method, this paper studied the soil respiration in grazing and fenced typical Leymus chinensis steppes, Inner Mongolia, and its relationships with environmental factors. The results showed that the daily pattern of soil respiration could be expressed as a one-humped curve, and the highest values appeared at 13:00-15:00 in the fenced and grazing plots. The diurnal dynamics of soil respiration mainly depended on the surface temperature at the fenced plots and the soil temperature at 5 cm depth at the grazing plots. In June and July, the average soil respiration rate was 2.7 times greater at the fenced plots than that at the grazing plots, while the difference was not distinct in August and September, which was similar with the change of the belowground biomass. The reason was probably that the plant was influenced differently in different phenological phases by grazing and the change of environmental factors. It showed that human activity may not result in the increase of soil respiration rate. The seasonal dynamics of soil respiration was closely correlated with soil water content at the 0-10 cm depth at the fenced and grazing sites, and the maximum R2 was 0.853 and 0.741, respectively. The difference was that the correlation of soil respiration seasonal dynamics with soil water content was larger at the fenced plots than at the grazing plots. The correlations of soil respiration diurnal and seasonal dynamics with temperature and soil water content at lower profiles were larger than those at deeper profiles at the fenced and grazing sites.

  10. Respiration of Nitrate and Nitrite.

    Science.gov (United States)

    Cole, Jeffrey A; Richardson, David J

    2008-09-01

    Nitrate reduction to ammonia via nitrite occurs widely as an anabolic process through which bacteria, archaea, and plants can assimilate nitrate into cellular biomass. Escherichia coli and related enteric bacteria can couple the eight-electron reduction of nitrate to ammonium to growth by coupling the nitrate and nitrite reductases involved to energy-conserving respiratory electron transport systems. In global terms, the respiratory reduction of nitrate to ammonium dominates nitrate and nitrite reduction in many electron-rich environments such as anoxic marine sediments and sulfide-rich thermal vents, the human gastrointestinal tract, and the bodies of warm-blooded animals. This review reviews the regulation and enzymology of this process in E. coli and, where relevant detail is available, also in Salmonella and draws comparisons with and implications for the process in other bacteria where it is pertinent to do so. Fatty acids may be present in high levels in many of the natural environments of E. coli and Salmonella in which oxygen is limited but nitrate is available to support respiration. In E. coli, nitrate reduction in the periplasm involves the products of two seven-gene operons, napFDAGHBC, encoding the periplasmic nitrate reductase, and nrfABCDEFG, encoding the periplasmic nitrite reductase. No bacterium has yet been shown to couple a periplasmic nitrate reductase solely to the cytoplasmic nitrite reductase NirB. The cytoplasmic pathway for nitrate reduction to ammonia is restricted almost exclusively to a few groups of facultative anaerobic bacteria that encounter high concentrations of environmental nitrate.

  11. The economic production lot size model with several production rates

    DEFF Research Database (Denmark)

    Larsen, Christian

    should be chosen in the interval between the demand rate and the production rate, which minimize unit production costs, and should be used in an increasing order. Then, given the production rates, we derive closed form solutions for the optimal runtimes as well as the minimum average cost. Finally we...

  12. MATHEMATICAL MODELING OF HEATING RATE PRODUCT AT HIGH HEAT TREATMENT

    Directory of Open Access Journals (Sweden)

    M. M. Akhmedova

    2014-01-01

    Full Text Available Methods of computing and mathematical modeling are all widely used in the study of various heat exchange processes that provide the ability to study the dynamics of the processes, as well as to conduct a reasonable search for the optimal technological parameters of heat treatment.This work is devoted to the identification of correlations among the factors that have the greatest effect on the rate of heating of the product at hightemperature heat sterilization in a stream of hot air, which are chosen as the temperature difference (between the most and least warming up points and speed cans during heat sterilization.As a result of the experimental data warming of the central and peripheral layers compote of apples in a 3 liter pot at high-temperature heat treatment in a stream of hot air obtained by the regression equation in the form of a seconddegree polynomial, taking into account the effects of pair interaction of these parameters. 

  13. Near-infrared 808 nm light boosts complex IV-dependent respiration and rescues a Parkinson-related pink1 model.

    Directory of Open Access Journals (Sweden)

    Melissa Vos

    Full Text Available Mitochondrial electron transport chain (ETC defects are observed in Parkinson's disease (PD patients and in PD fly- and mouse-models; however it remains to be tested if acute improvement of ETC function alleviates PD-relevant defects. We tested the hypothesis that 808 nm infrared light that effectively penetrates tissues rescues pink1 mutants. We show that irradiating isolated fly or mouse mitochondria with 808 nm light that is absorbed by ETC-Complex IV acutely improves Complex IV-dependent oxygen consumption and ATP production, a feature that is wavelength-specific. Irradiating Drosophila pink1 mutants using a single dose of 808 nm light results in a rescue of major systemic and mitochondrial defects. Time-course experiments indicate mitochondrial membrane potential defects are rescued prior to mitochondrial morphological defects, also in dopaminergic neurons, suggesting mitochondrial functional defects precede mitochondrial swelling. Thus, our data indicate that improvement of mitochondrial function using infrared light stimulation is a viable strategy to alleviate pink1-related defects.

  14. Organic fuels for respiration in tropical river systems

    Science.gov (United States)

    Ward, N.; Keil, R. G.; Richey, J. E.; Krusche, A. V.; Medeiros, P. M.

    2011-12-01

    Watershed-derived organic matter is thought to provide anywhere from 30-90% of the organic matter in rivers (e.g. Hernes et al 2008; Spencer et al 2010). The most abundant biochemicals on land are cellulose, hemicelluloses, and lignin. Combined, they represent as much as 80% of the biomass in a typical forest and as much as 60% of the biomass in a typical field (natural or crop)(Bose et al 2009; Bridgeman et al., 2007; Hu and Zu 2006; Martens et al 2004). They are often assumed to be refractory and hard to degrade, but this assumption is at odds with virtually all observations: soils and marine sediments are not accumulating vast amounts of these compounds (Hedges and Oades, 1997), and degradation experiments suggest that cellulose, hemicelluloses and lignin are reactive and likely to be important fuels for respiration (Benner, 1991; Haddad et al, 1992; Dittmar et al, 2001; Otto and Simpson, 2006). During several trips to the lower Amazon River, incubation experiments were performed in which the biological degradation of lignin phenols was observed in order to assess the contribution of microbial respiration of terrestrially-derived macromolecules to gross respiration and CO2 gas evasion rates. Both particulate and dissolved lignin concentrations decreased by ~40% after being incubated in the dark for 5-7 days, indicating a turnover time of the entire lignin pool of 12-18 days. These results shift the paradigm that lignocellulose derived OM is highly recalcitrant, and indicate that microbial respiration of lignocellulose may play a larger role in total respiration rates/CO2 outgassing than previously thought. A simple mass balance calculation was done to test whether microbial degradation alone could explain the lignin data observed in the field. First, a theoretical particulate lignin concentration for Macapa was calculated based on the observed data at Obidos. The measured rate of particulate lignin degradation was multiplied by the transit time of water from

  15. DETERMINANTS OF SOVEREIGN RATING: FACTOR BASED ORDERED PROBIT MODELS FOR PANEL DATA ANALYSIS MODELING FRAMEWORK

    Directory of Open Access Journals (Sweden)

    Dilek Teker

    2013-01-01

    Full Text Available The aim of this research is to compose a new rating methodology and provide credit notches to 23 countries which of 13 are developed and 10 are emerging. There are various literature that explains the determinants of credit ratings. Following the literature, we select 11 variables for our model which of 5 are eliminated by the factor analysis. We use specific dummies to investigate the structural breaks in time and cross section such as pre crises, post crises, BRIC membership, EU membership, OPEC membership, shipbuilder country and platinum reserved country. Then we run an ordered probit model and give credit notches to the countries. We use FITCH ratings as benchmark. Thus, at the end we compare the notches of FITCH with the ones we derive out of our estimated model.

  16. Financial modeling in medicine: cash flow, basic metrics, the time value of money, discount rates, and internal rate of return.

    Science.gov (United States)

    Lexa, Frank James; Berlin, Jonathan W

    2005-03-01

    In this article, the authors cover tools for financial modeling. Commonly used time lines and cash flow diagrams are discussed. Commonly used but limited terms such as payback and breakeven are introduced. The important topics of the time value of money and discount rates are introduced to lay the foundation for their use in modeling and in more advanced metrics such as the internal rate of return. Finally, the authors broach the more sophisticated topic of net present value.

  17. Betaine is a positive regulator of mitochondrial respiration

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Icksoo, E-mail: icksoolee@dankook.ac.kr

    2015-01-09

    Highlights: • Betaine enhances cytochrome c oxidase activity and mitochondrial respiration. • Betaine increases mitochondrial membrane potential and cellular energy levels. • Betaine’s anti-tumorigenic effect might be due to a reversal of the Warburg effect. - Abstract: Betaine protects cells from environmental stress and serves as a methyl donor in several biochemical pathways. It reduces cardiovascular disease risk and protects liver cells from alcoholic liver damage and nonalcoholic steatohepatitis. Its pretreatment can rescue cells exposed to toxins such as rotenone, chloroform, and LiCl. Furthermore, it has been suggested that betaine can suppress cancer cell growth in vivo and in vitro. Mitochondrial electron transport chain (ETC) complexes generate the mitochondrial membrane potential, which is essential to produce cellular energy, ATP. Reduced mitochondrial respiration and energy status have been found in many human pathological conditions including aging, cancer, and neurodegenerative disease. In this study we investigated whether betaine directly targets mitochondria. We show that betaine treatment leads to an upregulation of mitochondrial respiration and cytochrome c oxidase activity in H2.35 cells, the proposed rate limiting enzyme of ETC in vivo. Following treatment, the mitochondrial membrane potential was increased and cellular energy levels were elevated. We propose that the anti-proliferative effects of betaine on cancer cells might be due to enhanced mitochondrial function contributing to a reversal of the Warburg effect.

  18. Cisplatin cytotoxicity is dependent on mitochondrial respiration in Saccharomyces cerevisiae

    Directory of Open Access Journals (Sweden)

    Santhipriya Inapurapu

    2017-01-01

    Full Text Available Objective(s: To understand the role of mitochondrial respiration in cisplatin sensitivity, we have employed wild-type and mitochondrial DNA depleted Rho0 yeast cells. Materials and Methods: Wild type and Rho0 yeast cultured in fermentable and non-fermentable sugar containing media, were studied for their sensitivity against cisplatin by monitoring growth curves, oxygen consumption, pH changes in cytosol/mitochondrial compartments, reactive oxygen species production and respiratory control ratio. Results: Wild-type yeast grown on glycerol exhibited heightened sensitivity to cisplatin than yeast grown on glucose. Cisplatin (100 μM, although significantly reduced the growth of wild- type cells, only slightly altered the growth rate of Rho0 cells. Cisplatin treatment decreased both pHcyt and pHmit to a similar extent without affecting the pH difference. Cisplatin dose-dependently increased the oxidative stress in wild-type, but not in respiration-deficient Rho0 strain. Cisplatin decreased the respiratory control ratio. Conclusion: These results suggest that cisplatin toxicity is influenced by the respiratory capacity of the cells and the intracellular oxidative burden. Although cisplatin per se slightly decreased the respiration of yeast cells grown in glucose, it did not disturb the mitochondrial chemiosmotic gradient.

  19. A dynamic soil chamber system coupled with a tunable diode laser for online measurements of delta-13C, delta-18O, and efflux rate of soil respired CO2

    Energy Technology Data Exchange (ETDEWEB)

    Powers, Heath H [Los Alamos National Laboratory; Mcdowell, Nate [Los Alamos National Laboratory; Hanson, David [UNM; Hunt, John [LANDCARE RESEARCH

    2009-01-01

    High frequency observations of the stable isotopic composition of CO(2) effluxes from soil have been sparse due in part to measurement challenges. We have developed an open-system method that utilizes a flow-through chamber coupled to a tunable diode laser (TDL) to quantify the rate of soil CO(2) efflux and its delta(13)C and delta(18)O values (delta(13)C(R) and delta(18)O(R), respectively). We tested the method first in the laboratory using an artificial soil test column and then in a semi-arid woodland. We found that the CO(2) efflux rates of 1.2 to 7.3 micromol m(-2) s(-1) measured by the chamber-TDL system were similar to measurements made using the chamber and an infrared gas analyzer (IRGA) (R(2) = 0.99) and compared well with efflux rates generated from the soil test column (R(2) = 0.94). Measured delta(13)C and delta(18)O values of CO(2) efflux using the chamber-TDL system at 2 min intervals were not significantly different from source air values across all efflux rates after accounting for diffusive enrichment. Field measurements during drought demonstrated a strong dependency of CO(2) efflux and isotopic composition on soil water content. Addition of water to the soil beneath the chamber resulted in average changes of +6.9 micromol m(-2) s(-1), -5.0 per thousand, and -55.0 per thousand for soil CO(2) efflux, delta(13)C(R) and delta(18)O(R), respectively. All three variables initiated responses within 2 min of water addition, with peak responses observed within 10 min for isotopes and 20 min for efflux. The observed delta(18)O(R) was more enriched than predicted from temperature-dependent H(2)O-CO(2) equilibration theory, similar to other recent observations of delta(18)O(R) from dry soils (Wingate L, Seibt U, Maseyk K, Ogee J, Almeida P, Yakir D, Pereira JS, Mencuccini M. Global Change Biol. 2008; 14: 2178). The soil chamber coupled with the TDL was found to be an effective method for capturing soil CO(2) efflux and its stable isotope composition at high

  20. Soil Respiration And Respiration Partitioning In An Oak-Savannah With A History Of Fertilization

    Science.gov (United States)

    Morris, K. A.; Nair, R.; Schrumpf, M.; Migliavacca, M.

    2017-12-01

    Soil respiration is a combination of autotrophic and heterotrophic components. These components have different controls and structurally complex ecosystems such as oak-savannahs offer an opportunity to study strongly contrasting conditions (ie., soil from under trees versus open areas) in an environment with similar soil mineralogy and climatic patterns. To measure respiration coming from plant roots, fungal hyphae, and free-living microbes we established stations of soil cores comprised of three selectively permeable meshes under tree canopies and in open grassy areas of a Holm Oak (Quercus ilex) savannah in Extremadura, Spain. Large plots of this ecosystem had previously been fertilized as part of a stoichiometeric imbalance study (in 2015). Stations were installed in Dec. 2016 within four plots; control, N added, P added, and N+P added. Respiration from cores was measured in campaigns at key phenological stages with a portable Li-Cor 8100A unit. Six months after installation > 50% of soil respiration was attributable to free-living microbes. There is a persistent effect of the prior fertilization, resulting in increased soil respiration in open areas regardless of fertilizer type, while respiration from under tree canopies had a varied response. Soil under tree canopies showed distinct sensitivity to stoichiometric imbalance, meaning that addition of N or P alone either did not change respiration or decreased it slightly, while N+P stimulated respiration. We determined that respiration from free-living microbes is a major component of soil respiration even in the most active plant growing season. However, because of the lag between the time of fertilization and the time of measurement, it not possible to say whether treatment responses are due solely to nutrient status of the soil or whether changes in plant biomass and species composition also play a role. Additional work planned at the site will shed light on this uncertainty as well as the contribution of

  1. Molecular Characterization of Bacterial Respiration on Minerals

    Energy Technology Data Exchange (ETDEWEB)

    Blake, Robert C.

    2013-04-26

    anomalous dispersion (MAD) phasing; 4. An acid-stable red cytochrome with a novel absorbance peak at 579 nm was purified from cell-free extracts of L. ferriphilum. Functional studies demonstrated that this cytochrome was an important component of the aerobic iron respiratory chain in this organism; 5. The specific adhesion of At. ferrooxidans to pyrite is mediated by an extracellular protein that was identified as aporusticyanin. The adhesion of At. ferrooxidans to minerals was characterized by high affinity binding that exhibited a high specificity for pyrite over other sulfide minerals. The principal biopolymer involved in this high-affinity adhesion to pyrite was isolated by mineral affinity chromatography and identified as aporusticyanin. The adhesion of purified aporusticyanin to minerals was observed to adhere to different mineral with a pattern of reactivity identical to that observed with the intact bacterium. Further, preincubation of pyrite with excess exogenous aporusticyanin served to inhibit the adherence of intact cells to the surface of the mineral, indicating that the protein and the cells adhered to the pyrite in a mutually exclusive manner. Taken together, these observations support a model where aporusticyanin located on the surface of the bacterial cell acts as a mineral-specific receptor for the initial adherence of At. ferrooxidans to solid pyrite; 6. The specific adhesion of L. ferriphilum to pyrite was mediated by a different acid-stable extracellular protein than aporusticyanin; and 7. A prototype integrating cavity absorption meter (ICAM) was assembled to determine whether this novel spectrophotometer could be used to study cellular respiration in situ.

  2. Classification rates: non‐parametric verses parametric models using ...

    African Journals Online (AJOL)

    This research sought to establish if non parametric modeling achieves a higher correct classification ratio than a parametric model. The local likelihood technique was used to model fit the data sets. The same sets of data were modeled using parametric logit and the abilities of the two models to correctly predict the binary ...

  3. Short Communication: HIV Patient Systemic Mitochondrial Respiration Improves with Exercise.

    Science.gov (United States)

    Kocher, Morgan; McDermott, Mindy; Lindsey, Rachel; Shikuma, Cecilia M; Gerschenson, Mariana; Chow, Dominic C; Kohorn, Lindsay B; Hetzler, Ronald K; Kimura, Iris F

    2017-10-01

    In HIV-infected individuals, impaired mitochondrial function may contribute to cardiometabolic disease as well as to fatigue and frailty. Aerobic exercise improves total body energy reserves; however, its impact at the cellular level is unknown. We assessed alterations in cellular bioenergetics in peripheral blood mononuclear cells (PBMC) before and after a 12-week aerobic exercise study in sedentary HIV-infected subjects on stable antiretroviral therapy who successfully completed a 12-week aerobic exercise program. In this prospective study, participants underwent supervised 20-40 min of light aerobic exercise (walking or jogging) performed three times per week for 12 weeks, gradually increasing to maintain an intensity of 50%-80% of heart rate reserve. Maximal aerobic capacity (VO 2MAX ) was assessed by a graded exercise test on a cycle ergometer before and after completion of the study. PBMC from compliant subjects (attended at least 70% of exercise sessions) were assessed for mitochondrial respiration using the Seahorse XF24 Bio-Analyzer. Seven of 24 enrolled subjects were compliant with the exercise regimen. In these individuals, a significant increase (p = .04) in VO 2MAX over 12 weeks was found with a median increase of 14%. During the same interval, a 2.45-fold increase in PBMC mitochondrial respiratory capacity (p = .04), a 5.65-fold increase in spare respiratory capacity (p = .01), and a 3.15-fold (p = .04) increase in nonmitochondrial respiration was observed. Aerobic exercise improves respiration at the cellular level. The diagnostic and prognostic value of such improved cellular respiration in the setting of chronic HIV warrants further investigation.

  4. Impacts of temperature on primary productivity and respiration in naturally structured macroalgal assemblages.

    Directory of Open Access Journals (Sweden)

    Leigh W Tait

    Full Text Available Rising global temperatures caused by human-mediated change has already triggered significant responses in organismal physiology, distribution and ecosystem functioning. Although the effects of rising temperature on the physiology of individual organisms are well understood, the effect on community-wide processes has remained elusive. The fixation of carbon via primary productivity is an essential ecosystem function and any shifts in the balance of primary productivity and respiration could alter the carbon balance of ecosystems. Here we show through a series of tests that respiration of naturally structured algal assemblages in southern New Zealand greatly increases with rising temperature, with implications for net primary productivity (NPP. The NPP of in situ macroalgal assemblages was minimally affected by natural temperature variation, possibly through photo-acclimation or temperature acclimation responses, but respiration rates and compensating irradiance were negatively affected. However, laboratory experiments testing the impacts of rising temperature on several photosynthetic parameters showed a decline in NPP, increasing respiration rates and increasing compensating irradiance. The respiration Q10 of laboratory assemblages (the difference in metabolic rates over 10°C averaged 2.9 compared to a Q10 of 2 often seen in other autotrophs. However, gross primary productivity (GPP Q10 averaged 2, indicating that respiration was more severely affected by rising temperature. Furthermore, combined high irradiance and high temperature caused photoinhibition in the laboratory, and resulted in 50% lower NPP at high irradiance. Our study shows that communities may be more severely affected by rising global temperatures than would be expected by responses of individual species. In particular, enhanced respiration rates and rising compensation points have the potential to greatly affect the carbon balance of macroalgal assemblages through declines in

  5. Responses of soil respiration and barley growth to modified supply of oxygen in the soil

    Directory of Open Access Journals (Sweden)

    A. SIMOJOKI

    2008-12-01

    Full Text Available Roots of dry-land plants are supplied with oxygen mainly by molecular diffusion from soil air. Roots may suffer from hypoxia if soil aeration is reduced by compaction and wetting. Although the mechanisms involved are well known, more research is needed to relate soil aeration status to plant growth. The effects of reduced oxygen supply on soil respiration and the growth of barley seedlings were studied in pot experiments with fine sand soil, where the soil air composition was varied by flushing the soil with gas streams containing 0%, 2%, 6%, 10% or 20% O2 independently of compactness (bulk density 1.4, 1.6 Mg m-3 and wetness (air space 0-5%, >5%. Plant growth decreased only at 0-2% O2 in the loose moist soil but as early as 20% O2 in the wet soil. Soil compaction impaired plant growth regardless of wetting and aeration. In the loose moist soil cropped with barley, the respiration rate (emission of CO2 did not decrease at 6% O2 but decreased clearly at 0-2% O2. The results compared fairly well with the critical oxygen concentrations calculated by a simple multicylindrical model, in which the water-film thickness around the roots was estimated using soil water retention data.

  6. Nicotinamide supplementation phenocopies SIR2 inactivation by modulating carbon metabolism and respiration during yeast chronological aging.

    Science.gov (United States)

    Orlandi, Ivan; Pellegrino Coppola, Damiano; Strippoli, Maurizio; Ronzulli, Rossella; Vai, Marina

    2017-01-01

    Nicotinamide (NAM), a form of vitamin B 3 , is a byproduct and noncompetitive inhibitor of the deacetylation reaction catalyzed by Sirtuins. These represent a family of evolutionarily conserved NAD + -dependent deacetylases that are well-known critical regulators of metabolism and aging and whose founding member is Sir2 of Saccharomyces cerevisiae. Here, we investigated the effects of NAM supplementation in the context of yeast chronological aging, the established model for studying aging of postmitotic quiescent mammalian cells. Our data show that NAM supplementation at the diauxic shift results in a phenocopy of chronologically aging sir2Δ cells. In fact, NAM-supplemented cells display the same chronological lifespan extension both in expired medium and extreme Calorie Restriction. Furthermore, NAM allows the cells to push their metabolism toward the same outcomes of sir2Δ cells by elevating the level of the acetylated Pck1. Both these cells have the same metabolic changes that concern not only anabolic pathways such as an increased gluconeogenesis but also respiratory activity in terms both of respiratory rate and state of respiration. In particular, they have a higher respiratory reserve capacity and a lower non-phosphorylating respiration that in concert with a low burden of superoxide anions can affect positively chronological aging. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

  7. SU-E-J-67: Evaluation of Breathing Patterns for Respiratory-Gated Radiation Therapy Using Respiration Regularity Index

    Energy Technology Data Exchange (ETDEWEB)

    Cheong, K; Lee, M; Kang, S; Yoon, J; Park, S; Hwang, T; Kim, H; Kim, K; Han, T; Bae, H [Hallym University College of Medicine, Anyang (Korea, Republic of)

    2014-06-01

    Purpose: Despite the importance of accurately estimating the respiration regularity of a patient in motion compensation treatment, an effective and simply applicable method has rarely been reported. The authors propose a simple respiration regularity index based on parameters derived from a correspondingly simplified respiration model. Methods: In order to simplify a patient's breathing pattern while preserving the data's intrinsic properties, we defined a respiration model as a power of cosine form with a baseline drift. According to this respiration formula, breathing-pattern fluctuation could be explained using four factors: sample standard deviation of respiration period, sample standard deviation of amplitude and the results of simple regression of the baseline drift (slope and standard deviation of residuals of a respiration signal. Overall irregularity (δ) was defined as a Euclidean norm of newly derived variable using principal component analysis (PCA) for the four fluctuation parameters. Finally, the proposed respiration regularity index was defined as ρ=ln(1+(1/ δ))/2, a higher ρ indicating a more regular breathing pattern. Subsequently, we applied it to simulated and clinical respiration signals from real-time position management (RPM; Varian Medical Systems, Palo Alto, CA) and investigated respiration regularity. Moreover, correlations between the regularity of the first session and the remaining fractions were investigated using Pearson's correlation coefficient. Results: The respiration regularity was determined based on ρ; patients with ρ<0.3 showed worse regularity than the others, whereas ρ>0.7 was suitable for respiratory-gated radiation therapy (RGRT). Fluctuations in breathing cycle and amplitude were especially determinative of ρ. If the respiration regularity of a patient's first session was known, it could be estimated through subsequent sessions. Conclusions: Respiration regularity could be objectively determined

  8. Plankton community respiration, net ecosystem metabolism, and oxygen dynamics on the Louisiana continental shelf: implications for hypoxia

    Science.gov (United States)

    We conducted a multi-year study of the Louisiana continental shelf (LCS) to better understand the linkages between water column metabolism and the formation of hypoxia (dissolved oxygen respiration rates (WR) were measured on 10 cr...

  9. Interest rate models for pension and insurance regulation

    NARCIS (Netherlands)

    Broeders, Dirk; de Jong, Frank; Schotman, Peter

    2016-01-01

    Liabilities of pension funds and life insurers typically have very long times to maturity. The valuation of such liabilities introduces particular challenges as it relies on long term interest rates. As the market for long term interest rates is less liquid, financial institutions and the regulator

  10. Interest Rate Models for Pension and Insurance Regulation

    NARCIS (Netherlands)

    Broeders, D.W.G.A.; de Jong, Frank; Schotman, Peter

    Liabilities of pension funds and life insurers typically have very long times to maturity. The valuation of such liabilities introduces particular challenges as it relies on long term interest rates. As the market for long term interest rates is less liquid, financial institutions and the regulator

  11. Modelling the filling rate of pit latrines | Brouckaert | Water SA

    African Journals Online (AJOL)

    Excreta (faeces and urine) that are deposited into a pit latrine are subject to biodegradation, which substantially reduces the volume that remains. On the other hand, other matter that is not biodegradable usually finds itsway into pit latrines. The net filling rate is thus dependent on both the rate of addition of material and its ...

  12. Oracle posterior rates in the White Noise Model

    NARCIS (Netherlands)

    Babenko, A.

    2010-01-01

    All the results about posterior rates obtained until now are related to the optimal (minimax) rates for the estimation problem over the corresponding nonparametric smoothness classes, i.e. of a global nature. In the meantime, a new local approach to optimality has been developed within the

  13. Flexible Coupling of Respiration and Vocalizations with Locomotion and Head Movements in the Freely Behaving Rat

    Directory of Open Access Journals (Sweden)

    Joseph Andrews Alves

    2016-01-01

    Full Text Available Quadrupedal mammals typically synchronize their respiration with body movements during rhythmic locomotion. In the rat, fast respiration is coupled to head movements during sniffing behavior, but whether respiration is entrained by stride dynamics is not known. We recorded intranasal pressure, head acceleration, instantaneous speed, and ultrasonic vocalizations from male and female adult rats while freely behaving in a social environment. We used high-speed video recordings of stride to understand how head acceleration signals relate to locomotion and developed techniques to identify episodes of sniffing, walking, trotting, and galloping from the recorded variables. Quantitative analysis of synchrony between respiration and head acceleration rhythms revealed that respiration and locomotion movements were coordinated but with a weaker coupling than expected from previous work in other mammals. We have recently shown that rats behaving in social settings produce high rates of ultrasonic vocalizations during locomotion bouts. Accordingly, rats emitted vocalizations in over half of the respiratory cycles during fast displacements. We present evidence suggesting that emission of these calls disrupts the entrainment of respiration by stride. The coupling between these two variables is thus flexible, such that it can be overridden by other behavioral demands.

  14. Ecosystem warming does not affect photosynthesis or aboveground autotrophic respiration for boreal black spruce

    Energy Technology Data Exchange (ETDEWEB)

    Bronson, D.R. [Wyoming Univ., Laramie, WY (United States). Dept. of Renewable Resources; Gower, S.T. [Wisconsin Univ., Madison, WI (United States). Dept. of Forest Ecology and Management

    2010-04-15

    Substantial increases in climatic temperatures may cause boreal forests to become a carbon source. An improved understanding of the effect of climatic warming on photosynthesis and autotrophic respiration is needed in order to determine the impact of temperature increases on net carbon balances. This study measured the light-saturated photosynthesis foliage respiration and stem respiration of black spruce in heated and control plots during a 3-year period at a site located in Thompson, Manitoba. Greenhouses and soil-heating cables were used to maintain air and soil temperatures at 5 degrees C above ambient air and soil temperatures. Studies were conducted to determine the influence of soil and air warming; soil-only warming; and greenhouses maintained at ambient temperatures. The study showed that treatment differences for photosynthesis, foliage respiration, and stem respiration were not significant over the 3-year period. Results suggested that black spruce may not have significant changes in photosynthesis or respiration rates in warmer climates. 38 refs., 3 tabs., 4 figs.

  15. Cheyne-Stokes respiration in patients with congestive heart failure: causes and consequences.

    Science.gov (United States)

    Lorenzi-Filho, Geraldo; Genta, Pedro R; Figueiredo, Adelaide C; Inoue, Daniel

    2005-08-01

    Cheyne-Stokes respiration is a form of periodic breathing in which central apneas and hypopneas alternate with periods of hyperventilation, producing a waxing and waning pattern of tidal volume. This review focuses on the causes and consequences of Cheyne-Stokes respiration in patients with congestive heart failure, in whom the prevalence is strikingly high and ranges from 30% to 50%. Several factors have been implicated in the genesis of Cheyne-Stokes respiration, including low cardiac output and recurrent hypoxia. The key pathophysiological mechanism triggering Cheyne-Stokes respiration is hyperventilation and low arterial CO2 (PaCO2) that when below the apneic threshold triggers a central apnea. Hyperventilation is associated with pulmonary congestion, and Cheyne-Stokes respiration is more prone to occur during sleep, when the respiratory system is mainly dependent on chemical control. It is associated with recurrent dips in oxygen saturation and arousals from sleep, with oscillations in blood pressure and heart rate, sympathetic activation and increased risk of ventricular tachycardia. Cheyne-Stokes respiration is an independent marker of poor prognosis and may participate in a vicious cycle, further stressing the failing heart.

  16. Olfactory Bulb Field Potentials and Respiration in Sleep-Wake States of Mice.

    Science.gov (United States)

    Jessberger, Jakob; Zhong, Weiwei; Brankačk, Jurij; Draguhn, Andreas

    2016-01-01

    It is well established that local field potentials (LFP) in the rodent olfactory bulb (OB) follow respiration. This respiration-related rhythm (RR) in OB depends on nasal air flow, indicating that it is conveyed by sensory inputs from the nasal epithelium. Recently RR was found outside the olfactory system, suggesting that it plays a role in organizing distributed network activity. It is therefore important to measure RR and to delineate it from endogenous electrical rhythms like theta which cover similar frequency bands in small rodents. In order to validate such measurements in freely behaving mice, we compared rhythmic LFP in the OB with two respiration-related biophysical parameters: whole-body plethysmography (PG) and nasal temperature (thermocouple; TC). During waking, all three signals reflected respiration with similar reliability. Peak power of RR in OB decreased with increasing respiration rate whereas power of PG increased. During NREM sleep, respiration-related TC signals disappeared and large amplitude slow waves frequently concealed RR in OB. In this situation, PG provided a reliable signal while breathing-related rhythms in TC and OB returned only during microarousals. In summary, local field potentials in the olfactory bulb do reliably reflect respiratory rhythm during wakefulness and REM sleep but not during NREM sleep.

  17. Olfactory Bulb Field Potentials and Respiration in Sleep-Wake States of Mice

    Directory of Open Access Journals (Sweden)

    Jakob Jessberger

    2016-01-01

    Full Text Available It is well established that local field potentials (LFP in the rodent olfactory bulb (OB follow respiration. This respiration-related rhythm (RR in OB depends on nasal air flow, indicating that it is conveyed by sensory inputs from the nasal epithelium. Recently RR was found outside the olfactory system, suggesting that it plays a role in organizing distributed network activity. It is therefore important to measure RR and to delineate it from endogenous electrical rhythms like theta which cover similar frequency bands in small rodents. In order to validate such measurements in freely behaving mice, we compared rhythmic LFP in the OB with two respiration-related biophysical parameters: whole-body plethysmography (PG and nasal temperature (thermocouple; TC. During waking, all three signals reflected respiration with similar reliability. Peak power of RR in OB decreased with increasing respiration rate whereas power of PG increased. During NREM sleep, respiration-related TC signals disappeared and large amplitude slow waves frequently concealed RR in OB. In this situation, PG provided a reliable signal while breathing-related rhythms in TC and OB returned only during microarousals. In summary, local field potentials in the olfactory bulb do reliably reflect respiratory rhythm during wakefulness and REM sleep but not during NREM sleep.

  18. Effect of typhoon disturbance on soil respiration dynamic in a tropical broadleaves plantation in southern Taiwan

    Science.gov (United States)

    Chiang, Po-Neng; Yu, Jui-Chu; Lai, Yen-Jen

    2017-04-01

    Global forests contain 69% of total carbon stored in forest soil and litter. But the carbon storage ability and release rate of warming gases of forest soil also affect global climate change. Reforestation is one of the best solutions to mitigate warming gases release and to store in soil. Typhoon is one of the most hazards to disturb forest ecosystem and change carbon cycle. Typhoon disturbance is also affect soil carbon cycle such as soil respiration, carbon storage. Therefore, the objective of this study is to clarify the effect of typhoon disturbance on soil respiration dynamic in a tropical broadleaves plantation in southern Taiwan. Fourteen broadleaved tree species were planted in 2002-2005. Twelves continuous soil respiration chambers was divided two treatments (trench and non-trench) and observed since 2011 to 2014. The soil belongs to Entisol with over 60% of sandstone. The soil pH is 5.5 with low base cations because of high sand percentage. Forest biometric such as tree high, DBH, litterfall was measured in 2011-2014. Data showed that the accumulation amount of litterfall was highest in December to February and lowest in June. Soil respiration was related with season variation in research site. Soil temperature showed significantly exponential related with soil respiration in research site (p<0.001).However, soil respiration showed significantly negative relationship with total amount of litterfall (p<0.001), suggesting that the tree was still young and did not reach crown closure.

  19. Manipulatives-Based Laboratory for Majors Biology – a Hands-On Approach to Understanding Respiration and Photosynthesis

    Directory of Open Access Journals (Sweden)

    Sarah M. Boomer

    2011-09-01

    Full Text Available The first course in our year-long introductory series for Biology majors encompasses four learning units: biological molecules and cells, metabolism, genetics, and evolution. Of these, the metabolism unit, which includes respiration and photosynthesis, has shown the lowest student exam scores, least interest, and lowest laboratory ratings. Consequently, we hypothesized that modeling metabolic processes in the laboratory would improve student content learning during this course unit. Specifically, we developed manipulatives-based laboratory exercises that combined paper cutouts, movable blocks, and large diagrams of the cell. In particular, our novel use of connecting LEGO blocks allowed students to move model electrons and phosphates between molecules and within defined spaces of the cell. We assessed student learning using both formal (content indicators and attitude surveys and informal (the identification of misconceptions or discussions with students approaches. On the metabolism unit content exam, student performance improved by 46% over pretest scores and by the end of the course, the majority of students rated metabolism as their most-improved (43% and favorite (33% subject as compared with other unit topics. The majority of students rated manipulatives-based labs as very helpful, as compared to non-manipulatives-based labs. In this report, we will demonstrate that students made learning gains across all content areas, but most notably in the unit that covered respiration and photosynthesis.

  20. A New Compendium of Soil Respiration Data for Africa

    Directory of Open Access Journals (Sweden)

    Terence Epule Epule

    2015-04-01

    Full Text Available The objective of this paper is to present to the scientific community a new dataset derived from existing literature on soil respiration in Africa. The data has thus been obtained by searching for records in peer review papers and grey literature. The main search engines used are: Scientific Citation Index (SCI database, ISI Science web and Google scholar. This data description paper has greatly advanced the number of data points on soil respiration in Africa from 4 in 2010 to 62 in 2014. The new data points are culled from 47 peer review publications and grey literature reports. The data lends its self to a lot of possible analytical methods such as correlation analysis, multiple linear regressions, artificial neural network analysis and process base modeling. The overall conclusion that can be drawn here is that this paper has greatly advanced the availability of soil respiration data in Africa by presenting all the available records that before now were only reported in different studies.

  1. Effect of chamber enclosure time on soil respiration flux: A comparison of linear and non-linear flux calculation methods

    DEFF Research Database (Denmark)

    Kandel, Tanka P; Lærke, Poul Erik; Elsgaard, Lars

    2016-01-01

    One of the shortcomings of closed chamber methods for soil respiration (SR) measurements is the decreased CO2 diffusion rate from soil to chamber headspace that may occur due to increased chamber CO2 concentrations. This feedback on diffusion rate may lead to underestimation of pre-deployment flu......One of the shortcomings of closed chamber methods for soil respiration (SR) measurements is the decreased CO2 diffusion rate from soil to chamber headspace that may occur due to increased chamber CO2 concentrations. This feedback on diffusion rate may lead to underestimation of pre...... was placed on fixed collars, and CO2 concentration in the chamber headspace were recorded at 1-s intervals for 45 min. Fluxes were measured in different soil types (sandy, sandy loam and organic soils), and for various manipulations (tillage, rain and drought) and soil conditions (temperature and moisture......) to obtain a range of fluxes with different shapes of flux curves. The linear method provided more stable flux results during short enclosure times (few min) but underestimated initial fluxes by 15–300% after 45 min deployment time. Non-linear models reduced the underestimation as average underestimation...

  2. Improving respiration measurements with gas exchange analyzers.