WorldWideScience

Sample records for modeling oceanic primary

  1. Models for ecological models: Ocean primary productivity

    Science.gov (United States)

    Wikle, Christopher K.; Leeds, William B.; Hooten, Mevin B.

    2016-01-01

    The ocean accounts for more than 70% of planet Earth's surface, and it processes are critically important to marine and terrestrial life.  Ocean ecosystems are strongly dependent on the physical state of the ocean (e.g., transports, mixing, upwelling, runoff, and ice dynamics(.  As an example, consider the Coastal Gulf of Alaska (CGOA) region.

  2. Remote sensing of oceanic primary production: Computations using a spectral model

    Digital Repository Service at National Institute of Oceanography (India)

    Sathyendranath, S.; Platt, T.; Caverhill, C.M.; Warnock, R.E.; Lewis, M.R.

    A spectral model of underwater irradiance is coupled with a spectral version of the photosynthesis-light relationship to compute oceanic primary production. The results are shown to be significantly different from those obtained using...

  3. Small diversity effects on ocean primary production under environmental change in a diversity-resolving ocean ecosystem model

    DEFF Research Database (Denmark)

    Prowe, Friederike; Pahlow, M.; Dutkiewicz, S.

    2013-01-01

    Marine ecosystem models used to investigate how global change affects ocean ecosystems and their functioning typically omit pelagic diversity. Diversity, however, can affect functions such as primary production and their sensitivity to environmental changes. Using a global ocean ecosystem model...... that explicitly resolves phytoplankton diversity within four phytoplankton functional types (PFTs) we investigate the model's ability to capture diversity effects on primary production under environmental change. An idealized scenario with a sudden reduction in vertical mixing causes diversity and primary......-production changes that turn out to be largely independent of the number of coexisting phytoplankton types. The model provides a small number of niches with respect to nutrient use in accordance with the PFTs defined in the model, and increasing the number of phytoplankton types increases the resolution within...

  4. Modelling size-fractionated primary production in the Atlantic Ocean from remote sensing

    Science.gov (United States)

    Brewin, Robert J. W.; Tilstone, Gavin H.; Jackson, Thomas; Cain, Terry; Miller, Peter I.; Lange, Priscila K.; Misra, Ankita; Airs, Ruth L.

    2017-11-01

    Marine primary production influences the transfer of carbon dioxide between the ocean and atmosphere, and the availability of energy for the pelagic food web. Both the rate and the fate of organic carbon from primary production are dependent on phytoplankton size. A key aim of the Atlantic Meridional Transect (AMT) programme has been to quantify biological carbon cycling in the Atlantic Ocean and measurements of total primary production have been routinely made on AMT cruises, as well as additional measurements of size-fractionated primary production on some cruises. Measurements of total primary production collected on the AMT have been used to evaluate remote-sensing techniques capable of producing basin-scale estimates of primary production. Though models exist to estimate size-fractionated primary production from satellite data, these have not been well validated in the Atlantic Ocean, and have been parameterised using measurements of phytoplankton pigments rather than direct measurements of phytoplankton size structure. Here, we re-tune a remote-sensing primary production model to estimate production in three size fractions of phytoplankton (10 μm) in the Atlantic Ocean, using measurements of size-fractionated chlorophyll and size-fractionated photosynthesis-irradiance experiments conducted on AMT 22 and 23 using sequential filtration-based methods. The performance of the remote-sensing technique was evaluated using: (i) independent estimates of size-fractionated primary production collected on a number of AMT cruises using 14C on-deck incubation experiments and (ii) Monte Carlo simulations. Considering uncertainty in the satellite inputs and model parameters, we estimate an average model error of between 0.27 and 0.63 for log10-transformed size-fractionated production, with lower errors for the small size class (10 μm), and errors generally higher in oligotrophic waters. Application to satellite data in 2007 suggests the contribution of cells 2 μm to total

  5. Directional and Spectral Irradiance in Ocean Models: Effects on Simulated Global Phytoplankton, Nutrients, and Primary Production

    Science.gov (United States)

    Gregg, Watson W.; Rousseaux, Cecile S.

    2016-01-01

    The importance of including directional and spectral light in simulations of ocean radiative transfer was investigated using a coupled biogeochemical-circulation-radiative model of the global oceans. The effort focused on phytoplankton abundances, nutrient concentrations and vertically-integrated net primary production. The importance was approached by sequentially removing directional (i.e., direct vs. diffuse) and spectral irradiance and comparing results of the above variables to a fully directionally and spectrally-resolved model. In each case the total irradiance was kept constant; it was only the pathways and spectral nature that were changed. Assuming all irradiance was diffuse had negligible effect on global ocean primary production. Global nitrate and total chlorophyll concentrations declined by about 20% each. The largest changes occurred in the tropics and sub-tropics rather than the high latitudes, where most of the irradiance is already diffuse. Disregarding spectral irradiance had effects that depended upon the choice of attenuation wavelength. The wavelength closest to the spectrally-resolved model, 500 nm, produced lower nitrate (19%) and chlorophyll (8%) and higher primary production (2%) than the spectral model. Phytoplankton relative abundances were very sensitive to the choice of non-spectral wavelength transmittance. The combined effects of neglecting both directional and spectral irradiance exacerbated the differences, despite using attenuation at 500 nm. Global nitrate decreased 33% and chlorophyll decreased 24%. Changes in phytoplankton community structure were considerable, representing a change from chlorophytes to cyanobacteria and coccolithophores. This suggested a shift in community function, from light-limitation to nutrient limitation: lower demands for nutrients from cyanobacteria and coccolithophores favored them over the more nutrient-demanding chlorophytes. Although diatoms have the highest nutrient demands in the model, their

  6. Control of primary production in the Arctic by nutrients and light: insights from a high resolution ocean general circulation model

    Directory of Open Access Journals (Sweden)

    E. E. Popova

    2010-11-01

    Full Text Available Until recently, the Arctic Basin was generally considered to be a low productivity area and was afforded little attention in global- or even basin-scale ecosystem modelling studies. Due to anthropogenic climate change however, the sea ice cover of the Arctic Ocean is undergoing an unexpectedly fast retreat, exposing increasingly large areas of the basin to sunlight. As indicated by existing Arctic phenomena such as ice-edge blooms, this decline in sea-ice is liable to encourage pronounced growth of phytoplankton in summer and poses pressing questions concerning the future of Arctic ecosystems. It thus provides a strong impetus to modelling of this region.

    The Arctic Ocean is an area where plankton productivity is heavily influenced by physical factors. As these factors are strongly responding to climate change, we analyse here the results from simulations of the 1/4° resolution global ocean NEMO (Nucleus for European Modelling of the Ocean model coupled with the MEDUSA (Model for Ecosystem Dynamics, carbon Utilisation, Sequestration and Acidification biogeochemical model, with a particular focus on the Arctic basin. Simulated productivity is consistent with the limited observations for the Arctic, with significant production occurring both under the sea-ice and at the thermocline, locations that are difficult to sample in the field.

    Results also indicate that a substantial fraction of the variability in Arctic primary production can be explained by two key physical factors: (i the maximum penetration of winter mixing, which determines the amount of nutrients available for summer primary production, and (ii short-wave radiation at the ocean surface, which controls the magnitude of phytoplankton blooms. A strong empirical correlation was found in the model output between primary production and these two factors, highlighting the importance of physical processes in the Arctic Ocean.

  7. Net primary productivity estimates and environmental variables in the Arctic Ocean: An assessment of coupled physical-biogeochemical models

    Science.gov (United States)

    Lee, Younjoo J.; Matrai, Patricia A.; Friedrichs, Marjorie A. M.; Saba, Vincent S.; Aumont, Olivier; Babin, Marcel; Buitenhuis, Erik T.; Chevallier, Matthieu; de Mora, Lee; Dessert, Morgane; Dunne, John P.; Ellingsen, Ingrid H.; Feldman, Doron; Frouin, Robert; Gehlen, Marion; Gorgues, Thomas; Ilyina, Tatiana; Jin, Meibing; John, Jasmin G.; Lawrence, Jon; Manizza, Manfredi; Menkes, Christophe E.; Perruche, Coralie; Le Fouest, Vincent; Popova, Ekaterina E.; Romanou, Anastasia; Samuelsen, Annette; Schwinger, Jörg; Séférian, Roland; Stock, Charles A.; Tjiputra, Jerry; Tremblay, L. Bruno; Ueyoshi, Kyozo; Vichi, Marcello; Yool, Andrew; Zhang, Jinlun

    2016-12-01

    The relative skill of 21 regional and global biogeochemical models was assessed in terms of how well the models reproduced observed net primary productivity (NPP) and environmental variables such as nitrate concentration (NO3), mixed layer depth (MLD), euphotic layer depth (Zeu), and sea ice concentration, by comparing results against a newly updated, quality-controlled in situ NPP database for the Arctic Ocean (1959-2011). The models broadly captured the spatial features of integrated NPP (iNPP) on a pan-Arctic scale. Most models underestimated iNPP by varying degrees in spite of overestimating surface NO3, MLD, and Zeu throughout the regions. Among the models, iNPP exhibited little difference over sea ice condition (ice-free versus ice-influenced) and bottom depth (shelf versus deep ocean). The models performed relatively well for the most recent decade and toward the end of Arctic summer. In the Barents and Greenland Seas, regional model skill of surface NO3 was best associated with how well MLD was reproduced. Regionally, iNPP was relatively well simulated in the Beaufort Sea and the central Arctic Basin, where in situ NPP is low and nutrients are mostly depleted. Models performed less well at simulating iNPP in the Greenland and Chukchi Seas, despite the higher model skill in MLD and sea ice concentration, respectively. iNPP model skill was constrained by different factors in different Arctic Ocean regions. Our study suggests that better parameterization of biological and ecological microbial rates (phytoplankton growth and zooplankton grazing) are needed for improved Arctic Ocean biogeochemical modeling.

  8. Modeling UV-B Effects on Primary Production Throughout the Southern Ocean Using Multi-Sensor Satellite Data

    Science.gov (United States)

    Lubin, Dan

    2001-01-01

    This study has used a combination of ocean color, backscattered ultraviolet, and passive microwave satellite data to investigate the impact of the springtime Antarctic ozone depletion on the base of the Antarctic marine food web - primary production by phytoplankton. Spectral ultraviolet (UV) radiation fields derived from the satellite data are propagated into the water column where they force physiologically-based numerical models of phytoplankton growth. This large-scale study has been divided into two components: (1) the use of Total Ozone Mapping Spectrometer (TOMS) and Special Sensor Microwave Imager (SSM/I) data in conjunction with radiative transfer theory to derive the surface spectral UV irradiance throughout the Southern Ocean; and (2) the merging of these UV irradiances with the climatology of chlorophyll derived from SeaWiFS data to specify the input data for the physiological models.

  9. Modelling the impact of riverine DON removal by marine bacterioplankton on primary production in the Arctic Ocean

    Science.gov (United States)

    Le Fouest, V.; Manizza, M.; Tremblay, B.; Babin, M.

    2015-06-01

    The planktonic and biogeochemical dynamics of the Arctic shelves exhibit a strong variability in response to Arctic warming. In this study, we employ a biogeochemical model coupled to a pan-Arctic ocean-sea ice model (MITgcm) to elucidate the processes regulating the primary production (PP) of phytoplankton, bacterioplankton (BP), and their interactions. The model explicitly simulates and quantifies the contribution of usable dissolved organic nitrogen (DON) drained by the major circum-Arctic rivers to PP and BP in a scenario of melting sea ice (1998-2011). Model simulations suggest that, on average between 1998 and 2011, the removal of usable riverine dissolved organic nitrogen (RDON) by bacterioplankton is responsible for a ~ 26% increase in the annual BP for the whole Arctic Ocean. With respect to total PP, the model simulates an increase of ~ 8% on an annual basis and of ~ 18% in summer. Recycled ammonium is responsible for the PP increase. The recycling of RDON by bacterioplankton promotes higher BP and PP, but there is no significant temporal trend in the BP : PP ratio within the ice-free shelves over the 1998-2011 period. This suggests no significant evolution in the balance between autotrophy and heterotrophy in the last decade, with a constant annual flux of RDON into the coastal ocean, although changes in RDON supply and further reduction in sea-ice cover could potentially alter this delicate balance.

  10. An assessment of phytoplankton primary productivity in the Arctic Ocean from satellite ocean color/in situ chlorophyll‐a based models

    Science.gov (United States)

    Matrai, Patricia A.; Friedrichs, Marjorie A. M.; Saba, Vincent S.; Antoine, David; Ardyna, Mathieu; Asanuma, Ichio; Babin, Marcel; Bélanger, Simon; Benoît‐Gagné, Maxime; Devred, Emmanuel; Fernández‐Méndez, Mar; Gentili, Bernard; Hirawake, Toru; Kang, Sung‐Ho; Kameda, Takahiko; Katlein, Christian; Lee, Sang H.; Lee, Zhongping; Mélin, Frédéric; Scardi, Michele; Smyth, Tim J.; Tang, Shilin; Turpie, Kevin R.; Waters, Kirk J.; Westberry, Toby K.

    2015-01-01

    Abstract We investigated 32 net primary productivity (NPP) models by assessing skills to reproduce integrated NPP in the Arctic Ocean. The models were provided with two sources each of surface chlorophyll‐a concentration (chlorophyll), photosynthetically available radiation (PAR), sea surface temperature (SST), and mixed‐layer depth (MLD). The models were most sensitive to uncertainties in surface chlorophyll, generally performing better with in situ chlorophyll than with satellite‐derived values. They were much less sensitive to uncertainties in PAR, SST, and MLD, possibly due to relatively narrow ranges of input data and/or relatively little difference between input data sources. Regardless of type or complexity, most of the models were not able to fully reproduce the variability of in situ NPP, whereas some of them exhibited almost no bias (i.e., reproduced the mean of in situ NPP). The models performed relatively well in low‐productivity seasons as well as in sea ice‐covered/deep‐water regions. Depth‐resolved models correlated more with in situ NPP than other model types, but had a greater tendency to overestimate mean NPP whereas absorption‐based models exhibited the lowest bias associated with weaker correlation. The models performed better when a subsurface chlorophyll‐a maximum (SCM) was absent. As a group, the models overestimated mean NPP, however this was partly offset by some models underestimating NPP when a SCM was present. Our study suggests that NPP models need to be carefully tuned for the Arctic Ocean because most of the models performing relatively well were those that used Arctic‐relevant parameters. PMID:27668139

  11. Importance of dissolved organic nitrogen in the north Atlantic Ocean in sustaining primary production: a 3-D modelling approach

    Directory of Open Access Journals (Sweden)

    G. Charria

    2008-10-01

    Full Text Available An eddy-permitting coupled ecosystem-circulation model including dissolved organic matter is used to estimate the dissolved organic nitrogen (DON supply sustaining primary production in the subtropical north Atlantic Ocean.

    After an analysis of the coupled model performances compared to the data, a sensitivity study demonstrates the strong impact of parameter values linked to the hydrolysis of particulate organic nitrogen and remineralisation of dissolved organic nitrogen on surface biogeochemical concentrations.

    The physical transport of dissolved organic nitrogen contributes to maintain the level of primary production in this subtropical gyre. It is dominated by the meridional component. We estimate a meridional net input of 0.039 molN m−2 yr−1 over the domain (13–35° N and 71–40° W in the subtropical gyre. This supply is driven by the Ekman transport in the southern part and by non-Ekman transport (meridional current components, eddies, meanders and fronts in the northern part of the subtropical gyre. At 12° N, our estimate (18 kmolN s−1 confirms the estimation (17.9 kmolN s−1 made by Roussenov et al. (2006 using a simplified biogeochemical model in a large scale model. This DON meridional input is within the range (from 0.05 up to 0.24 molN m−2 yr−1 (McGillicuddy and Robinson, 1997; Oschlies, 2002 of all other possible mechanisms (mesoscale activity, nitrogen fixation, atmospheric deposition fuelling primary production in the subtropical gyre. The present study confirms that the lateral supply of dissolved organic nitrogen might be important in closing the N budget over the north Atlantic Ocean and quantifies the importance of meridional input of dissolved organic nitrogen.

  12. Multiple stressors for oceanic primary production

    KAUST Repository

    Agusti, Susana

    2015-12-15

    Marine ecosystems are increasingly exposed to stress factors of anthropogenic origin that change their function, structure and services they deliver society. Climate change occurs simultaneously with other changes in the environment acting jointly in a context of global environmental change. For oceanic phytoplankton communities, the research conducted so far has identified stress factors associated with global change and their impact individually (warming, acidification, increased UVB radiation, pollutants). But when several stressors act simultaneously interactions and responses are not equal to the sum of individual impacts, but may have synergistic effects (the effects are multiplied) or antagonistic (cancel out the effects) that hinder predictions of the vulnerability of ecosystems to global change. Here we will examine the vulnerability of oceanic primary producers to the accumulation of different stressors associated with global change. The trend for autotrophic picoplankton to increase with temperature in the ocean has led to predictions that autotrophic picoplankton abundance will increase with warming. However, it is documented a trend towards a decline in productivity, due to declined autotroph biomass and production with warming and the associated stratification in the subtropical ocean. Models predicting an increase in abundance are in contradiction with the reported decrease in productivity in several oceanic areas, and associate oligotrophication. Here we perform a global study to analyze the relationships of autotrophic picoplankton with oceanic temperature, nutrients, underwater light and ultraviolet B (UVB) radiation, and productivity. We built a model to project the future changes of autotrophic picoplankton considering multiple environmental changes in future climate scenarios for the subtropical gyres. We considered increased water temperature, and associated changes in productivity and underwater light and UVB. The model show that warming and

  13. Ocean General Circulation Models

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Jin-Ho; Ma, Po-Lun

    2012-09-30

    1. Definition of Subject The purpose of this text is to provide an introduction to aspects of oceanic general circulation models (OGCMs), an important component of Climate System or Earth System Model (ESM). The role of the ocean in ESMs is described in Chapter XX (EDITOR: PLEASE FIND THE COUPLED CLIMATE or EARTH SYSTEM MODELING CHAPTERS). The emerging need for understanding the Earth’s climate system and especially projecting its future evolution has encouraged scientists to explore the dynamical, physical, and biogeochemical processes in the ocean. Understanding the role of these processes in the climate system is an interesting and challenging scientific subject. For example, a research question how much extra heat or CO2 generated by anthropogenic activities can be stored in the deep ocean is not only scientifically interesting but also important in projecting future climate of the earth. Thus, OGCMs have been developed and applied to investigate the various oceanic processes and their role in the climate system.

  14. Modeling the impact of riverine DON removal by marine bacterioplankton on primary production in the Arctic Ocean

    Science.gov (United States)

    Le Fouest, V.; Manizza, M.; Tremblay, B.; Babin, M.

    2014-12-01

    The planktonic and biogeochemical dynamics of the Arctic shelves exhibit a strong variability in response to Arctic warming. In this study, in order to elucidate on the processes regulating the production of phytoplankton (PP) and bacterioplankton (BP) and their interactions, we employ a biogeochemical model coupled to a pan-Arctic ocean-sea ice model (MITgcm) to explicitly simulate and quantify the contribution of usable dissolved organic nitrogen (DON) drained by the major circum-Arctic rivers on PP and BP in a scenario of melting sea ice (1998-2011). Model simulations suggest that on average between 1998 and 2011, the removal of usable RDON by bacterioplankton is responsible of a ~26% increase of the annual BP for the whole Arctic Ocean. With respect to total PP, the model simulates an increase of ~8% on an annual basis and of ~18% in summer. Recycled ammonium is responsible for the PP increase. The recycling of RDON by bacterioplankton promotes higher BP and PP but there is no significant temporal trend in the BP : PP ratio within the ice-free shelves over the 1998-2011 period. This suggests no significant evolution in the balance between autotrophy and heterotrophy in the last decade with a constant annual flux of RDON into the coastal ocean although changes in RDON supply and further reduction in sea ice cover could potentially alter this delicate balance.

  15. Mechanisms controlling primary and new production in a global ecosystem model – Part II: The role of the upper ocean short-term periodic and episodic mixing events

    Directory of Open Access Journals (Sweden)

    E. E. Popova

    2006-01-01

    Full Text Available The use of 6 h, daily, weekly and monthly atmospheric forcing resulted in dramatically different predictions of plankton productivity in a global 3-D coupled physical-biogeochemical model. Resolving the diurnal cycle of atmospheric variability by use of 6 h forcing, and hence also diurnal variability in UML depth, produced the largest difference, reducing predicted global primary and new production by 25% and 10% respectively relative to that predicted with daily and weekly forcing. This decrease varied regionally, being a 30% reduction in equatorial areas primarily because of increased light limitation resulting from deepening of the mixed layer overnight as well as enhanced storm activity, and 25% at moderate and high latitudes primarily due to increased grazing pressure resulting from late winter stratification events. Mini-blooms of phytoplankton and zooplankton occur in the model during these events, leading to zooplankton populations being sufficiently well developed to suppress the progress of phytoplankton blooms. A 10% increase in primary production was predicted in the peripheries of the oligotrophic gyres due to increased storm-induced nutrient supply end enhanced winter production during the short term stratification events that are resolved in the run forced by 6 h meteorological fields. By resolving the diurnal cycle, model performance was significantly improved with respect to several common problems: underestimated primary production in the oligotrophic gyres; overestimated primary production in the Southern Ocean; overestimated magnitude of the spring bloom in the subarctic Pacific Ocean, and overestimated primary production in equatorial areas. The result of using 6 h forcing on predicted ecosystem dynamics was profound, the effects persisting far beyond the hourly timescale, and having major consequences for predicted global and new production on an annual basis.

  16. HYbrid Coordinate Ocean Model (HYCOM): Global

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Global HYbrid Coordinate Ocean Model (HYCOM) and U.S. Navy Coupled Ocean Data Assimilation (NCODA) 3-day, daily forecast at approximately 9-km (1/12-degree)...

  17. An Arctic Ice/Ocean Coupled Model with Wave Interactions

    Science.gov (United States)

    2014-09-30

    Arctic sea ice has experienced since at least the beginning of the satellite era are believed to be caused by ice - albedo temperature feedback...dimensional (2D) ocean surface wave interactions with sea ice in a contemporary 3D Arctic ice /ocean model. To accomplish this primary goal, the objectives...of how ocean waves and sea ice interact, for use in operational models of the Arctic Basin and the adjacent seas ; – improve the forecasting

  18. Sensitivity analysis of an ocean carbon cycle model in the North Atlantic: an investigation of parameters affecting the air-sea CO2 flux, primary production and export of detritus

    Directory of Open Access Journals (Sweden)

    C. J. Merchant

    2011-06-01

    Full Text Available The sensitivity of the biological parameters in a nutrient-phytoplankton-zooplankton-detritus (NPZD model in the calculation of the air-sea CO2 flux, primary production and detrital export is analysed. We explore the effect on these outputs of variation in the values of the twenty parameters that control ocean ecosystem growth in a 1-D formulation of the UK Met Office HadOCC NPZD model used in GCMs. We use and compare the results from one-at-a-time and all-at-a-time perturbations performed at three sites in the EuroSITES European Ocean Observatory Network: the Central Irminger Sea (60° N 40° W, the Porcupine Abyssal Plain (49° N 16° W and the European Station for Time series in the Ocean Canary Islands (29° N 15° W. Reasonable changes to the values of key parameters are shown to have a large effect on the calculation of the air-sea CO2 flux, primary production, and export of biological detritus to the deep ocean. Changes in the values of key parameters have a greater effect in more productive regions than in less productive areas. The most sensitive parameters are generally found to be those controlling well-established ocean ecosystem parameterisations widely used in many NPZD-type models. The air-sea CO2 flux is most influenced by variation in the parameters that control phytoplankton growth, detrital sinking and carbonate production by phytoplankton (the rain ratio. Primary production is most sensitive to the parameters that define the shape of the photosynthesis-irradiance curve. Export production is most sensitive to the parameters that control the rate of detrital sinking and the remineralisation of detritus.

  19. Ocean modeling on unstructured meshes

    Science.gov (United States)

    Danilov, S.

    2013-09-01

    Unstructured meshes are common in coastal modeling, but still rarely used for modeling the large-scale ocean circulation. Existing and new projects aim at changing this situation by proposing models enabling a regional focus (multiresolution) in global setups, without nesting and open boundaries. Among them, finite-volume models using the C-grid discretization on Voronoi-centroidal meshes or cell-vertex quasi-B-grid discretization on triangular meshes work well and offer the multiresolution functionality at a price of being 2 to 4 times slower per degree of freedom than structured-mesh models. This is already sufficient for many practical tasks and will be further improved as the number of vertical layers is increased. Approaches based on the finite-element method, both used or proposed, are as a rule slower at present. Most of staggered discretizations on triangular or Voronoi meshes allow spurious modes which are difficult to filter on unstructured meshes. The ongoing research seeks how to handle them and explores new approaches where such modes are absent. Issues of numerical efficiency and accurate transport schemes are still important, and the question on parameterizations for multiresolution meshes is hardly explored at all. The review summarizes recent developments the main practical result of which is the emergence of multiresolution models for simulating large-scale ocean circulation.

  20. Nitrogenous nutrients and primary production in a tropical oceanic environment

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Wafar, S.; Devassy, V.P.

    Measurements of the concentrations of nitrogenous nutrients and primary production were made at 10 stations along 8 degrees N and 10 degrees N in the tropical oceanic Lakshadweep waters Inorganic nitrogen (NO3, NO2 and NH4) accounted for less than...

  1. Regional Ocean Modeling System (ROMS): Samoa

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Regional Ocean Modeling System (ROMS) 7-day, 3-hourly forecast for the region surrounding the islands of Samoa at approximately 3-km resolution. While considerable...

  2. Regional Ocean Modeling System (ROMS): CNMI

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Regional Ocean Modeling System (ROMS) 7-day, 3-hourly forecast for the region surrounding the Commonwealth of the Northern Mariana Islands (CNMI) at approximately...

  3. Regional Ocean Modeling System (ROMS): Guam

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Regional Ocean Modeling System (ROMS) 6-day, 3-hourly forecast for the region surrounding Guam at approximately 2-km resolution. While considerable effort has been...

  4. Deep ocean model penetrator experiments

    International Nuclear Information System (INIS)

    Freeman, T.J.; Burdett, J.R.F.

    1986-01-01

    Preliminary trials of experimental model penetrators in the deep ocean have been conducted as an international collaborative exercise by participating members (national bodies and the CEC) of the Engineering Studies Task Group of the Nuclear Energy Agency's Seabed Working Group. This report describes and gives the results of these experiments, which were conducted at two deep ocean study areas in the Atlantic: Great Meteor East and the Nares Abyssal Plain. Velocity profiles of penetrators of differing dimensions and weights have been determined as they free-fell through the water column and impacted the sediment. These velocity profiles are used to determine the final embedment depth of the penetrators and the resistance to penetration offered by the sediment. The results are compared with predictions of embedment depth derived from elementary models of a penetrator impacting with a sediment. It is tentatively concluded that once the resistance to penetration offered by a sediment at a particular site has been determined, this quantity can be used to sucessfully predict the embedment that penetrators of differing sizes and weights would achieve at the same site

  5. GOCE Data for Ocean Modelling

    DEFF Research Database (Denmark)

    Herceg, Matija

    MDT and GOCINA project MDT is made. The results presented here are based on only 18 months of GOCE data, and they show that GOCE data provides better estimation of the MDT and ocean’s geostrophic circulation in GOCINA region than any previously obtained using only satellite observations. However...... gravitational potential. The results are Earth geopotential models and the geoid. An important use of GOCE is in oceanography, where an improved understanding of Earth’s gravitational field contributes to an improved description of the ocean circulation. The GOCE gradients, having a spatially dense data...... and order. The method makes use of all available GOCE gradient data in addition to the global models and aims at improving the determination of Earth’s gravitational field in regional areas. Subsequently, the calculated equipotential surface, known as the geoid, is used together with measurements of sea...

  6. Puget Sound ocean acidification model outputs - Modeling the impacts of ocean acidification on ecosystems and populations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NWFSC OA team will model the effects of ocean acidification on regional marine species and ecosystems using food web models, life-cycle models, and bioenvelope...

  7. Boundary Conditions, Data Assimilation, and Predictability in Coastal Ocean Models

    National Research Council Canada - National Science Library

    Samelson, Roger M; Allen, John S; Egbert, Gary D; Kindle, John C; Snyder, Chris

    2007-01-01

    ...: The specific objectives of this research are to determine the impact on coastal ocean circulation models of open ocean boundary conditions from Global Ocean Data Assimilation Experiment (GODAE...

  8. Emergent constraints on projections of declining primary production in the tropical oceans

    Science.gov (United States)

    Kwiatkowski, Lester; Bopp, Laurent; Aumont, Olivier; Ciais, Philippe; Cox, Peter M.; Laufkötter, Charlotte; Li, Yue; Séférian, Roland

    2017-04-01

    Marine primary production is a fundamental component of the Earth system, providing the main source of food and energy to the marine food web, and influencing the concentration of atmospheric CO 2 (refs ,). Earth system model (ESM) projections of global marine primary production are highly uncertain with models projecting both increases and declines of up to 20% by 2100. This uncertainty is predominantly driven by the sensitivity of tropical ocean primary production to climate change, with the latest ESMs suggesting twenty-first-century tropical declines of between 1 and 30% (refs ,). Here we identify an emergent relationship between the long-term sensitivity of tropical ocean primary production to rising equatorial zone sea surface temperature (SST) and the interannual sensitivity of primary production to El Niño/Southern Oscillation (ENSO)-driven SST anomalies. Satellite-based observations of the ENSO sensitivity of tropical primary production are then used to constrain projections of the long-term climate impact on primary production. We estimate that tropical primary production will decline by 3 +/- 1% per kelvin increase in equatorial zone SST. Under a business-as-usual emissions scenario this results in an 11 +/- 6% decline in tropical marine primary production and a 6 +/- 3% decline in global marine primary production by 2100.

  9. Ocean acidification ameliorates harmful effects of warming in primary consumer.

    Science.gov (United States)

    Pedersen, Sindre Andre; Hanssen, Anja Elise

    2018-01-01

    Climate change-induced warming and ocean acidification are considered two imminent threats to marine biodiversity and current ecosystem structures. Here, we have for the first time examined an animal's response to a complete life cycle of exposure to co-occurring warming (+3°C) and ocean acidification (+1,600 μatm CO 2 ), using the key subarctic planktonic copepod, Calanus finmarchicus , as a model species. The animals were generally negatively affected by warming, which significantly reduced the females' energy status and reproductive parameters (respectively, 95% and 69%-87% vs. control). Unexpectedly, simultaneous acidification partially offset the negative effect of warming in an antagonistic manner, significantly improving reproductive parameters and hatching success (233%-340% improvement vs. single warming exposure). The results provide proof of concept that ocean acidification may partially offset negative effects caused by warming in some species. Possible explanations and ecological implications for the observed antagonistic effect are discussed.

  10. Laboratory Models of Ocean Circulation

    National Research Council Canada - National Science Library

    Whitehead, John

    1997-01-01

    ...). The subsequent studies were then split into two separate experiments involving convection in the two types of configurations which are likely to produce the very coldest water in the oceans, one...

  11. Towards petascaling of the NEMO ocean model

    Science.gov (United States)

    Donners, J.; Audiffren, N.; Molines, J.-M.

    2012-04-01

    PRACE, the Partnership for Advanced Computing in Europe, offers acces to the largest high-performance computing systems in Europe. These systems follow the trend of increasing numbers of nodes, each with an increasing number of cores. To utilize these computing systems, it is necessary to use a model that is parallellized and has a good scalability. This poster describes different efforts to improve the scalability of the NEMO ocean model. Most importantly, the problem size needs to be chosen adequately: it should contain enough computations to keep thousands of cores busy, but foremostly it has to be scientifically relevant. The global, 1/12degree, NEMO ocean model configuration, developed by the Mercator team, is used for operational ocean forecasting. Therefore, PRACE selected this model for the PRACE Benchmarking suite. However, an increased problem size alone was not enough to efficiently use these petascale systems. Different optimizations were required to reach the necessary performance. Scientifically, the model should simulate one year within a wallclock day. Technically, the application needs to scale up to a minimum number of cores. For example, to utilize the fastest system in Europe, the new Curie system in France, the lower limit is 2048 cores. Scalability can be increased by minimizing the time needed for communication between cores. This has been done in two ways. Firstly, advanced parameters of the MPI-communication library were optimized. The improvement consists in: 1. using RDMA for eager messages (NEMO messages size are below the eager size limit) conjugated with adequate openib flags. 2. tuning for openMPI for collective communication through the btl_coll_tuned_dynamic_rules flag. Overall, the improvement is 33%. Secondly, NEMO uses a tri-polar and staggered grid, which involves a complicated fold across the northpole. Communication along this fold involves collective gather and scatter operations which create a bottleneck at a single core, so

  12. Primary health care models

    Science.gov (United States)

    Brown, Judith Belle; French, Reta; McCulloch, Amy; Clendinning, Eric

    2012-01-01

    Abstract Objective To explore the knowledge and perceptions of fourth-year medical students regarding the new models of primary health care (PHC) and to ascertain whether that knowledge influenced their decisions to pursue careers in family medicine. Design Qualitative study using semistructured interviews. Setting The Schulich School of Medicine and Dentistry at The University of Western Ontario in London. Participants Fourth-year medical students graduating in 2009 who indicated family medicine as a possible career choice on their Canadian Residency Matching Service applications. Methods Eleven semistructured interviews were conducted between January and April of 2009. Data were analyzed using an iterative and interpretive approach. The analysis strategy of immersion and crystallization assisted in synthesizing the data to provide a comprehensive view of key themes and overarching concepts. Main findings Four key themes were identified: the level of students’ knowledge regarding PHC models varied; the knowledge was generally obtained from practical experiences rather than classroom learning; students could identify both advantages and disadvantages of working within the new PHC models; and although students regarded the new PHC models positively, these models did not influence their decisions to pursue careers in family medicine. Conclusion Knowledge of the new PHC models varies among fourth-year students, indicating a need for improved education strategies in the years before clinical training. Being able to identify advantages and disadvantages of the PHC models was not enough to influence participants’ choice of specialty. Educators and health care policy makers need to determine the best methods to promote and facilitate knowledge transfer about these PHC models. PMID:22518904

  13. Ocean City, Maryland Coastal Digital Elevation Model

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA's National Geophysical Data Center (NGDC) is building high-resolution digital elevation models (DEMs) for select U.S. coastal regions. These integrated...

  14. Modeling water clarity in oceans and coasts

    Science.gov (United States)

    In oceans and coastal waters, phytoplankton is the primary producer of organic compounds which form the base for the food chain. The concentration of phytoplankton is a major factor controlling water clarity and the depth to which light penetrates in the water column. The light i...

  15. An isopycnic ocean carbon cycle model

    Directory of Open Access Journals (Sweden)

    K. M. Assmann

    2010-02-01

    Full Text Available The carbon cycle is a major forcing component in the global climate system. Modelling studies, aiming to explain recent and past climatic changes and to project future ones, increasingly include the interaction between the physical and biogeochemical systems. Their ocean components are generally z-coordinate models that are conceptually easy to use but that employ a vertical coordinate that is alien to the real ocean structure. Here, we present first results from a newly-developed isopycnic carbon cycle model and demonstrate the viability of using an isopycnic physical component for this purpose. As expected, the model represents well the interior ocean transport of biogeochemical tracers and produces realistic tracer distributions. Difficulties in employing a purely isopycnic coordinate lie mainly in the treatment of the surface boundary layer which is often represented by a bulk mixed layer. The most significant adjustments of the ocean biogeochemistry model HAMOCC, for use with an isopycnic coordinate, were in the representation of upper ocean biological production. We present a series of sensitivity studies exploring the effect of changes in biogeochemical and physical processes on export production and nutrient distribution. Apart from giving us pointers for further model development, they highlight the importance of preformed nutrient distributions in the Southern Ocean for global nutrient distributions. The sensitivity studies show that iron limitation for biological particle production, the treatment of light penetration for biological production, and the role of diapycnal mixing result in significant changes of nutrient distributions and liniting factors of biological production.

  16. Climate Modeling: Ocean Cavities below Ice Shelves

    Energy Technology Data Exchange (ETDEWEB)

    Petersen, Mark Roger [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Computer, Computational, and Statistical Sciences Division

    2016-09-12

    The Accelerated Climate Model for Energy (ACME), a new initiative by the U.S. Department of Energy, includes unstructured-mesh ocean, land-ice, and sea-ice components using the Model for Prediction Across Scales (MPAS) framework. The ability to run coupled high-resolution global simulations efficiently on large, high-performance computers is a priority for ACME. Sub-ice shelf ocean cavities are a significant new capability in ACME, and will be used to better understand how changing ocean temperature and currents influence glacial melting and retreat. These simulations take advantage of the horizontal variable-resolution mesh and adaptive vertical coordinate in MPAS-Ocean, in order to place high resolution below ice shelves and near grounding lines.

  17. Moving Towards Dynamic Ocean Management: How Well Do Modeled Ocean Products Predict Species Distributions?

    Directory of Open Access Journals (Sweden)

    Elizabeth A. Becker

    2016-02-01

    Full Text Available Species distribution models are now widely used in conservation and management to predict suitable habitat for protected marine species. The primary sources of dynamic habitat data have been in situ and remotely sensed oceanic variables (both are considered “measured data”, but now ocean models can provide historical estimates and forecast predictions of relevant habitat variables such as temperature, salinity, and mixed layer depth. To assess the performance of modeled ocean data in species distribution models, we present a case study for cetaceans that compares models based on output from a data assimilative implementation of the Regional Ocean Modeling System (ROMS to those based on measured data. Specifically, we used seven years of cetacean line-transect survey data collected between 1991 and 2009 to develop predictive habitat-based models of cetacean density for 11 species in the California Current Ecosystem. Two different generalized additive models were compared: one built with a full suite of ROMS output and another built with a full suite of measured data. Model performance was assessed using the percentage of explained deviance, root mean squared error (RMSE, observed to predicted density ratios, and visual inspection of predicted and observed distributions. Predicted distribution patterns were similar for models using ROMS output and measured data, and showed good concordance between observed sightings and model predictions. Quantitative measures of predictive ability were also similar between model types, and RMSE values were almost identical. The overall demonstrated success of the ROMS-based models opens new opportunities for dynamic species management and biodiversity monitoring because ROMS output is available in near real time and can be forecast.

  18. Forward modelling of oceanic lithospheric magnetization

    Science.gov (United States)

    Masterton, S. M.; Gubbins, D.; Müller, R. D.; Singh, K. H.

    2013-03-01

    We construct a model of remanence for the oceans, combine it with a model of induced magnetization for the whole Earth from a previous study, compute the predicted lithospheric geomagnetic field and compare the result with a model, MF7, that is based on satellite data. Remanence is computed by assigning magnetizations to the oceanic lithosphere acquired at the location and time of formation. The magnetizing field is assumed to be an axial dipole that switches polarity with the reversal time scale. The magnetization evolves with time by decay of thermal remanence and acquisition of chemical remanence. The direction of remanence is calculated by Euler rotation of the original geomagnetic field direction with respect to an absolute reference frame, significantly improving previous results which did not include realistic oceanic magnetization computed this way. Remanence only accounts for 24 per cent of the energy of the oceanic magnetization, the induced magnetization being dominant, increasing slightly to 30 per cent of the part of the magnetization responsible for generating geomagnetic anomalies and 39 per cent of the Lowes energy of the geomagnetic anomalies. This is because our model of oceanic crust and lithosphere is fairly uniform, and a uniform layer magnetized by a magnetic field of internal origin produces no external field. The largest anomalies are produced by oceanic lithosphere magnetized during the Cretaceous Normal Superchron. Away from ridges and magnetic quiet zones the prediction fails to match the MF7 values; these are also generally, but not always, somewhat smaller than the observations. This may indicate that the magnetization estimates are too small, in which case the most likely error is in the poorly-known magnetization deep in the crust or upper mantle, or it may indicate some other source such as locally underplated continental lithosphere or anomalous oceanic crust, or even small-scale core fields.

  19. Surface wind mixing in the Regional Ocean Modeling System (ROMS)

    Science.gov (United States)

    Robertson, Robin; Hartlipp, Paul

    2017-12-01

    Mixing at the ocean surface is key for atmosphere-ocean interactions and the distribution of heat, energy, and gases in the upper ocean. Winds are the primary force for surface mixing. To properly simulate upper ocean dynamics and the flux of these quantities within the upper ocean, models must reproduce mixing in the upper ocean. To evaluate the performance of the Regional Ocean Modeling System (ROMS) in replicating the surface mixing, the results of four different vertical mixing parameterizations were compared against observations, using the surface mixed layer depth, the temperature fields, and observed diffusivities for comparisons. The vertical mixing parameterizations investigated were Mellor- Yamada 2.5 level turbulent closure (MY), Large- McWilliams- Doney Kpp (LMD), Nakanishi- Niino (NN), and the generic length scale (GLS) schemes. This was done for one temperate site in deep water in the Eastern Pacific and three shallow water sites in the Baltic Sea. The model reproduced the surface mixed layer depth reasonably well for all sites; however, the temperature fields were reproduced well for the deep site, but not for the shallow Baltic Sea sites. In the Baltic Sea, the models overmixed the water column after a few days. Vertical temperature diffusivities were higher than those observed and did not show the temporal fluctuations present in the observations. The best performance was by NN and MY; however, MY became unstable in two of the shallow simulations with high winds. The performance of GLS nearly as good as NN and MY. LMD had the poorest performance as it generated temperature diffusivities that were too high and induced too much mixing. Further observational comparisons are needed to evaluate the effects of different stratification and wind conditions and the limitations on the vertical mixing parameterizations.

  20. Potential role of large oceanic diatoms in new primary production

    Science.gov (United States)

    Goldman, Joel C.

    1993-01-01

    Very large phytoplankton species >50 μm in size, particularly diatoms, generally are found in background numbers throughout the euphotic zone of oceanic waters. Yet, when responding to episodic injections of new nutrients across the nutricline at the base of the euphotic zone these phototrophs may make a disproportionately large contribution to new primary production. To test this concept, we isolated a group of large diatoms from the Sargasso Sea and found that the specific growth rate of several of these species in culture was great enough at the ≈2% light level in oligotrophic waters to meet the requirements of several hypothetical scenarios in which annual rates of new production from the sum of one or more episodic blooms were equal to contemporary estimates. Two of the fast-growing species, Stephanopyxis palmeriana (Greville) Grunow and Pseudoguinardia recta von Stosch, formed giant flocculant masses while growing. Such masses could sink rapidly out of the euphotic zone or be a direct food source for invertebrates or fish higher up the food chain. Not only would a short, simple trophic system with low losses result, but the events would virtually be impossible to observe with conventional sampling.

  1. Oceanic primary production 2. Estimation at global scale from satellite (coastal zone color scanner) chlorophyll

    Science.gov (United States)

    Antoine, David; André, Jean-Michel; Morel, André

    A fast method has been proposed [Antoine and Morel, this issue] to compute the oceanic primary production from the upper ocean chlorophyll-like pigment concentration, as it can be routinely detected by a spaceborne ocean color sensor. This method is applied here to the monthly global maps of the photosynthetic pigments that were derived from the coastal zone color scanner (CZCS) data archive [Feldman et al., 1989]. The photosynthetically active radiation (PAR) field is computed from the astronomical constant and by using an atmospheric model, thereafter combined with averaged cloud information, derived from the International Satellite Cloud Climatology Project (ISCCP). The aim is to assess the seasonal evolution, as well as the spatial distribution of the photosynthetic carbon fixation within the world ocean and for a ``climatological year,'' to the extent that both the chlorophyll information and the cloud coverage statistics actually are averages obtained over several years. The computed global annual production actually ranges between 36.5 and 45.6 Gt C yr-1 according to the assumption which is made (0.8 or 1) about the ratio of active-to-total pigments (recall that chlorophyll and pheopigments are not radiometrically resolved by CZCS). The relative contributions to the global productivity of the various oceans and zonal belts are examined. By considering the hypotheses needed in such computations, the nature of the data used as inputs, and the results of the sensitivity studies, the global numbers have to be cautiously considered. Improving the reliability of the primary production estimates implies (1) new global data sets allowing a higher temporal resolution and a better coverage, (2) progress in the knowledge of physiological responses of phytoplankton and therefore refinements of the time and space dependent parameterizations of these responses.

  2. Sediment interactions in a new ocean model

    International Nuclear Information System (INIS)

    Camplin, W.C.; Gurbutt, P.A.

    1986-01-01

    A new ocean model has been developed jointly by the Ministry of Agriculture, Fisheries and Food (MAFF) and the National Radiological Protection Board (NRPB). It has been used in 1985 for the Nuclear Energy Agency (NEA) review of the NE Atlantic site for low-level radioactive waste disposal. The circulation model, which covers the world's oceans, is overlaid with a sediment model, which includes particle interactions in the ocean interior and in the seabed. The ocean interior processes feature movements with water, two particle size ranges, equilibrium distribution coefficients, gravitational settling and dissolution during descent. In the seabed there is a stack of compartments consisting of an interface between bottom waters and the seabed surface, a well mixed or bioturbated layer, a diffusive layer and a sediment sink from which activity does not return. The processes connecting the seabed compartments are burial, bioturbation and pore water diffusion. Model predictions for an arbitrary release from the dump site are presented. Distribution coefficients are shown to be an important factor in determining water concentrations. (author)

  3. Climate engineering and the ocean: effects on biogeochemistry and primary production

    Science.gov (United States)

    Lauvset, Siv K.; Tjiputra, Jerry; Muri, Helene

    2017-12-01

    Here we use an Earth system model with interactive biogeochemistry to project future ocean biogeochemistry impacts from the large-scale deployment of three different radiation management (RM) climate engineering (also known as geoengineering) methods: stratospheric aerosol injection (SAI), marine sky brightening (MSB), and cirrus cloud thinning (CCT). We apply RM such that the change in radiative forcing in the RCP8.5 emission scenario is reduced to the change in radiative forcing in the RCP4.5 scenario. The resulting global mean sea surface temperatures in the RM experiments are comparable to those in RCP4.5, but there are regional differences. The forcing from MSB, for example, is applied over the oceans, so the cooling of the ocean is in some regions stronger for this method of RM than for the others. Changes in ocean net primary production (NPP) are much more variable, but SAI and MSB give a global decrease comparable to RCP4.5 (˜ 6 % in 2100 relative to 1971-2000), while CCT gives a much smaller global decrease of ˜ 3 %. Depending on the RM methods, the spatially inhomogeneous changes in ocean NPP are related to the simulated spatial change in the NPP drivers (incoming radiation, temperature, availability of nutrients, and phytoplankton biomass) but mostly dominated by the circulation changes. In general, the SAI- and MSB-induced changes are largest in the low latitudes, while the CCT-induced changes tend to be the weakest of the three. The results of this work underscore the complexity of climate impacts on NPP and highlight the fact that changes are driven by an integrated effect of multiple environmental drivers, which all change in different ways. These results stress the uncertain changes to ocean productivity in the future and advocate caution at any deliberate attempt at large-scale perturbation of the Earth system.

  4. Prediction of the Export and Fate of Global Ocean Net Primary Production: The EXPORTS Science Plan

    Directory of Open Access Journals (Sweden)

    David A Siegel

    2016-03-01

    Full Text Available Ocean ecosystems play a critical role in the Earth’s carbon cycle and the quantification of their impacts for both present conditions and for predictions into the future remains one of the greatest challenges in oceanography. The goal of the EXport Processes in the Ocean from Remote Sensing (EXPORTS Science Plan is to develop a predictive understanding of the export and fate of global ocean net primary production (NPP and its implications for present and future climates. The achievement of this goal requires a quantification of the mechanisms that control the export of carbon from the euphotic zone as well as its fate in the underlying twilight zone where some fraction of exported carbon will be sequestered in the ocean’s interior on time scales of months to millennia. Here we present a measurement / synthesis / modeling framework aimed at quantifying the fates of upper ocean NPP and its impacts on the global carbon cycle based upon the EXPORTS Science Plan. The proposed approach will diagnose relationships among the ecological, biogeochemical and physical oceanographic processes that control carbon cycling across a range of ecosystem and carbon cycling states leading to advances in satellite diagnostic and numerical prognostic models. To collect these data, a combination of ship and robotic field sampling, satellite remote sensing and numerical modeling is proposed which enables the sampling of the many pathways of NPP export and fates. This coordinated, process-oriented approach has the potential to foster new insights on ocean carbon cycling that maximizes its societal relevance through the achievement of research goals of many international research agencies and will be a key step towards our understanding of the Earth as an integrated system.

  5. Ocean City, Maryland Tsunami Forecast Grids for MOST Model

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Ocean City, Maryland Forecast Model Grids provides bathymetric data strictly for tsunami inundation modeling with the Method of Splitting Tsunami (MOST) model....

  6. Modelling ocean-colour-derived chlorophyll a

    Science.gov (United States)

    Dutkiewicz, Stephanie; Hickman, Anna E.; Jahn, Oliver

    2018-01-01

    This article provides a proof of concept for using a biogeochemical/ecosystem/optical model with a radiative transfer component as a laboratory to explore aspects of ocean colour. We focus here on the satellite ocean colour chlorophyll a (Chl a) product provided by the often-used blue/green reflectance ratio algorithm. The model produces output that can be compared directly to the real-world ocean colour remotely sensed reflectance. This model output can then be used to produce an ocean colour satellite-like Chl a product using an algorithm linking the blue versus green reflectance similar to that used for the real world. Given that the model includes complete knowledge of the (model) water constituents, optics and reflectance, we can explore uncertainties and their causes in this proxy for Chl a (called derived Chl a in this paper). We compare the derived Chl a to the actual model Chl a field. In the model we find that the mean absolute bias due to the algorithm is 22 % between derived and actual Chl a. The real-world algorithm is found using concurrent in situ measurement of Chl a and radiometry. We ask whether increased in situ measurements to train the algorithm would improve the algorithm, and find a mixed result. There is a global overall improvement, but at the expense of some regions, especially in lower latitudes where the biases increase. Not surprisingly, we find that region-specific algorithms provide a significant improvement, at least in the annual mean. However, in the model, we find that no matter how the algorithm coefficients are found there can be a temporal mismatch between the derived Chl a and the actual Chl a. These mismatches stem from temporal decoupling between Chl a and other optically important water constituents (such as coloured dissolved organic matter and detrital matter). The degree of decoupling differs regionally and over time. For example, in many highly seasonal regions, the timing of initiation and peak of the spring bloom in

  7. Modeling the Middle Jurassic ocean circulation

    Directory of Open Access Journals (Sweden)

    Maura Brunetti

    2015-10-01

    Full Text Available We present coupled ocean–sea-ice simulations of the Middle Jurassic (∼165 Ma when Laurasia and Gondwana began drifting apart and gave rise to the formation of the Atlantic Ocean. Since the opening of the Proto-Caribbean is not well constrained by geological records, configurations with and without an open connection between the Proto-Caribbean and Panthalassa are examined. We use a sea-floor bathymetry obtained by a recently developed three-dimensional (3D elevation model which compiles geological, palaeogeographical and geophysical data. Our original approach consists in coupling this elevation model, which is based on detailed reconstructions of oceanic realms, with a dynamical ocean circulation model. We find that the Middle Jurassic bathymetry of the Central Atlantic and Proto-Caribbean seaway only allows for a weak current of the order of 2 Sv in the upper 1000 m even if the system is open to the west. The effect of closing the western boundary of the Proto-Caribbean is to increase the transport related to barotropic gyres in the southern hemisphere and to change water properties, such as salinity, in the Neo-Tethys. Weak upwelling rates are found in the nascent Atlantic Ocean in the presence of this superficial current and we discuss their compatibility with deep-sea sedimentological records in this region.

  8. Respiration of new and old carbon in the surface ocean: Implications for estimates of global oceanic gross primary productivity

    Science.gov (United States)

    Carvalho, Matheus C.; Schulz, Kai G.; Eyre, Bradley D.

    2017-06-01

    New respiration (Rnew, of freshly fixated carbon) and old respiration (Rold, of storage carbon) were estimated for different regions of the global surface ocean using published data on simultaneous measurements of the following: (1) primary productivity using 14C (14PP); (2) gross primary productivity (GPP) based on 18O or O2; and (3) net community productivity (NCP) using O2. The ratio Rnew/GPP in 24 h incubations was typically between 0.1 and 0.3 regardless of depth and geographical area, demonstrating that values were almost constant regardless of large variations in temperature (0 to 27°C), irradiance (surface to 100 m deep), nutrients (nutrient-rich and nutrient-poor waters), and community composition (diatoms, flagellates, etc,). As such, between 10 and 30% of primary production in the surface ocean is respired in less than 24 h, and most respiration (between 55 and 75%) was of older carbon. Rnew was most likely associated with autotrophs, with minor contribution from heterotrophic bacteria. Patterns were less clear for Rold. Short 14C incubations are less affected by respiratory losses. Global oceanic GPP is estimated to be between 70 and 145 Gt C yr-1.Plain Language SummaryHere we present a comprehensive coverage of ocean new and old respiration. Our results show that nearly 20% of oceanic gross primary production is consumed in the first 24 h. However, most (about 60%) respiration is of older carbon fixed at least 24 h before its consumption. Rates of new respiration relative to gross primary production were remarkably constant for the entire ocean, which allowed a preliminary estimation of global primary productivity as between 70 and 145 gt C yr-1.

  9. Modeling Water Clarity and Light Quality in Oceans

    Directory of Open Access Journals (Sweden)

    Mohamed A. Abdelrhman

    2016-11-01

    Full Text Available Phytoplankton is a primary producer of organic compounds, and it forms the base of the food chain in ocean waters. The concentration of phytoplankton in the water column controls water clarity and the amount and quality of light that penetrates through it. The availability of adequate light intensity is a major factor in the health of algae and phytoplankton. There is a strong negative coupling between light intensity and phytoplankton concentration (e.g., through self-shading by the cells, which reduces available light and in return affects the growth rate of the cells. Proper modeling of this coupling is essential to understand primary productivity in the oceans. This paper provides the methodology to model light intensity in the water column, which can be included in relevant water quality models. The methodology implements relationships from bio-optical models, which use phytoplankton chlorophyll a (chl-a concentration as a surrogate for light attenuation, including absorption and scattering by other attenuators. The presented mathematical methodology estimates the reduction in light intensity due to absorption by pure seawater, chl-a pigment, non-algae particles (NAPs and colored dissolved organic matter (CDOM, as well as backscattering by pure seawater, phytoplankton particles and NAPs. The methods presented facilitate the prediction of the effects of various environmental and management scenarios (e.g., global warming, altered precipitation patterns, greenhouse gases on the wellbeing of phytoplankton communities in the oceans as temperature-driven chl-a changes take place.

  10. Partially molten magma ocean model

    International Nuclear Information System (INIS)

    Shirley, D.N.

    1983-01-01

    The properties of the lunar crust and upper mantle can be explained if the outer 300-400 km of the moon was initially only partially molten rather than fully molten. The top of the partially molten region contained about 20% melt and decreased to 0% at 300-400 km depth. Nuclei of anorthositic crust formed over localized bodies of magma segregated from the partial melt, then grew peripherally until they coverd the moon. Throughout most of its growth period the anorthosite crust floated on a layer of magma a few km thick. The thickness of this layer is regulated by the opposing forces of loss of material by fractional crystallization and addition of magma from the partial melt below. Concentrations of Sr, Eu, and Sm in pristine ferroan anorthosites are found to be consistent with this model, as are trends for the ferroan anorthosites and Mg-rich suites on a diagram of An in plagioclase vs. mg in mafics. Clustering of Eu, Sr, and mg values found among pristine ferroan anorthosites are predicted by this model

  11. Molecular biology in studies of oceanic primary production

    International Nuclear Information System (INIS)

    LaRoche, J.; Falkowski, P.G.; Geider, R.

    1992-01-01

    Remote sensing and the use of moored in situ instrumentation has greatly improved our ability to measure phytoplankton chlorophyll and photosynthesis on global scales with high temporal resolution. However, the interpretation of these measurements and their significance with respect to the biogeochemical cycling of carbon relies on their relationship with physiological and biochemical processes in phytoplankton. For example, the use of satellite images of surface chlorophyll to estimate primary production is often based on the functional relationship between photosynthesis and irradiance. A variety of environmental factors such as light, temperature, nutrient availability affect the photosynthesis/irradiance (P vs I) relationship in phytoplankton. We present three examples showing how molecular biology can be used to provide basic insight into the factors controlling primary productivity at three different levels of complexity: 1. Studies of light intensity regulation in unicellular alga show how molecular biology can help understand the processing of environmental cues leading to the regulation of photosynthetic gene expression. 2. Probing of the photosynthetic apparatus using molecular techniques can be used to test existing mechanistic models derived from the interpretation of physiological and biophysical measurements. 3. Exploratory work on the expression of specific proteins during nutrient-limited growth of phytoplankton may lead to the identification and production of molecular probes for field studies

  12. Predicting interactions among fishing, ocean warming, and ocean acidification in a marine system with whole-ecosystem models.

    Science.gov (United States)

    Griffith, Gary P; Fulton, Elizabeth A; Gorton, Rebecca; Richardson, Anthony J

    2012-12-01

    An important challenge for conservation is a quantitative understanding of how multiple human stressors will interact to mitigate or exacerbate global environmental change at a community or ecosystem level. We explored the interaction effects of fishing, ocean warming, and ocean acidification over time on 60 functional groups of species in the southeastern Australian marine ecosystem. We tracked changes in relative biomass within a coupled dynamic whole-ecosystem modeling framework that included the biophysical system, human effects, socioeconomics, and management evaluation. We estimated the individual, additive, and interactive effects on the ecosystem and for five community groups (top predators, fishes, benthic invertebrates, plankton, and primary producers). We calculated the size and direction of interaction effects with an additive null model and interpreted results as synergistic (amplified stress), additive (no additional stress), or antagonistic (reduced stress). Individually, only ocean acidification had a negative effect on total biomass. Fishing and ocean warming and ocean warming with ocean acidification had an additive effect on biomass. Adding fishing to ocean warming and ocean acidification significantly changed the direction and magnitude of the interaction effect to a synergistic response on biomass. The interaction effect depended on the response level examined (ecosystem vs. community). For communities, the size, direction, and type of interaction effect varied depending on the combination of stressors. Top predator and fish biomass had a synergistic response to the interaction of all three stressors, whereas biomass of benthic invertebrates responded antagonistically. With our approach, we were able to identify the regional effects of fishing on the size and direction of the interacting effects of ocean warming and ocean acidification. ©2012 Society for Conservation Biology.

  13. Natural Ocean Carbon Cycle Sensitivity to Parameterizations of the Recycling in a Climate Model

    Science.gov (United States)

    Romanou, A.; Romanski, J.; Gregg, W. W.

    2014-01-01

    Sensitivities of the oceanic biological pump within the GISS (Goddard Institute for Space Studies ) climate modeling system are explored here. Results are presented from twin control simulations of the air-sea CO2 gas exchange using two different ocean models coupled to the same atmosphere. The two ocean models (Russell ocean model and Hybrid Coordinate Ocean Model, HYCOM) use different vertical coordinate systems, and therefore different representations of column physics. Both variants of the GISS climate model are coupled to the same ocean biogeochemistry module (the NASA Ocean Biogeochemistry Model, NOBM), which computes prognostic distributions for biotic and abiotic fields that influence the air-sea flux of CO2 and the deep ocean carbon transport and storage. In particular, the model differences due to remineralization rate changes are compared to differences attributed to physical processes modeled differently in the two ocean models such as ventilation, mixing, eddy stirring and vertical advection. GISSEH(GISSER) is found to underestimate mixed layer depth compared to observations by about 55% (10 %) in the Southern Ocean and overestimate it by about 17% (underestimate by 2%) in the northern high latitudes. Everywhere else in the global ocean, the two models underestimate the surface mixing by about 12-34 %, which prevents deep nutrients from reaching the surface and promoting primary production there. Consequently, carbon export is reduced because of reduced production at the surface. Furthermore, carbon export is particularly sensitive to remineralization rate changes in the frontal regions of the subtropical gyres and at the Equator and this sensitivity in the model is much higher than the sensitivity to physical processes such as vertical mixing, vertical advection and mesoscale eddy transport. At depth, GISSER, which has a significant warm bias, remineralizes nutrients and carbon faster thereby producing more nutrients and carbon at depth, which

  14. Regional Ocean Modeling System (ROMS): Main Hawaiian Islands: Data Assimilating

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Regional Ocean Modeling System (ROMS) 3-day, 3-hourly data assimilating hindcast for the region surrounding the main Hawaiian islands at approximately 4-km...

  15. Regional Ocean Modeling System (ROMS): Oahu South Shore

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Regional Ocean Modeling System (ROMS) 2-day, 3-hourly forecast for the region surrounding the south shore of the island of Oahu at approximately 200-m resolution....

  16. Global ocean modeling on the Connection Machine

    International Nuclear Information System (INIS)

    Smith, R.D.; Dukowicz, J.K.; Malone, R.C.

    1993-01-01

    The authors have developed a version of the Bryan-Cox-Semtner ocean model (Bryan, 1969; Semtner, 1976; Cox, 1984) for massively parallel computers. Such models are three-dimensional, Eulerian models that use latitude and longitude as the horizontal spherical coordinates and fixed depth levels as the vertical coordinate. The incompressible Navier-Stokes equations, with a turbulent eddy viscosity, and mass continuity equation are solved, subject to the hydrostatic and Boussinesq approximations. The traditional model formulation uses a rigid-lid approximation (vertical velocity = 0 at the ocean surface) to eliminate fast surface waves. These waves would otherwise require that a very short time step be used in numerical simulations, which would greatly increase the computational cost. To solve the equations with the rigid-lid assumption, the equations of motion are split into two parts: a set of twodimensional ''barotropic'' equations describing the vertically-averaged flow, and a set of three-dimensional ''baroclinic'' equations describing temperature, salinity and deviations of the horizontal velocities from the vertically-averaged flow

  17. The Hamburg oceanic carbon cycle circulation model. Cycle 1

    International Nuclear Information System (INIS)

    Maier-Reimer, E.; Heinze, C.

    1992-02-01

    The carbon cycle model calculates the prognostic fields of oceanic geochemical carbon cycle tracers making use of a 'frozen' velocity field provided by a run of the LSG oceanic circulation model (see the corresponding manual, LSG=Large Scale Geostrophic). The carbon cycle model includes a crude approximation of interactions between sediment and bottom layer water. A simple (meridionally diffusive) one layer atmosphere model allows to calculate the CO 2 airborne fraction resulting from the oceanic biogeochemical interactions. (orig.)

  18. Numerical modeling of oceanic crustal hydrothermal systems

    Science.gov (United States)

    Latychev, Konstantin

    The oceanic crust is a complex rock-mineral formation which extends up to several kilometers below the sea floor and covers laterally about two thirds of the planet. Hydrothermal circulation within the crust is driven by magmatic sources and carried by the fluid residing in pores and cracks. Hydrothermal advection transfers about one quarter of the Earth's total heat power from the interior. Marine sediments are believed to be the largest repositories of solid ice-like methane clathrate hydrates. The compliance technique is an important tool for assessment of this resource. It makes use of the oceanic surface gravity waves to induce pressure variations on the sea floor and measure the corresponding vertical deformation. This thesis deals with the convective heat and mass transfer within the oceanic crust, as a fractured porous medium, and the elastic, quasi-static response of hydrated marine sediments to gravity wave loading. Both generic and site-specific applications are considered. Most applications are tackled numerically in three spatial dimensions. The major results are as follows. Fractures can trigger and maintain hydrothermal circulation. The permeability-thickness product in the direction of flow is an adequate parameter to represent the fracture if convection is not vigorous. A new temperature homogenization mechanism for the off-axial convection is proposed which is due to quasi-lateral circulation within a permeable zone between sediment cover and basalt. It explains both the observed correlation between surface heat flux and sediment thickness, as well as regular heat flux variations when no buried topography is present. A hydrothermal model for the CoAxial Segment of the Juan de Fuca Ridge predicts ridge-parallel convection with the low-temperature vents spaced 1 km apart. The compliance approach is feasible for a non-layered medium. The average compliance response depends on the bulk hydrate content, but not on a particular connectivity pattern

  19. Ocean circulation modeling by use of radar altimeter data

    Science.gov (United States)

    Olbers, Dirk; Alpers, W.; Hasselmann, K.; Maier-Reimer, E.; Kase, R.; Krauss, W.; Siedler, G.; Willebrand, J.; Zahel, W.

    1991-01-01

    The project will investigate the use of radar altimetry (RA) data in the determination of the ocean circulation models. RA data will be used to verify prognostic experiments of the steady state and seasonal cycle of large-scale circulation models and the statistical steady state of eddy-resolving models. The data will serve as initial and update conditions in data assimilation experiments and as constraints in inverse calculations. The aim of the project is a better understanding of ocean physics, the determination and mapping of ocean currents, and a contribution to the establishment of ocean circulation models for climate studies. The goal of the project is to use satellite radar altimetry data for improving our knowledge of ocean circulation both in a descriptive sense and through the physics that govern the circulation state. The basic tool is a series of ocean circulation models. Depending on the model, different techniques will be applied to incorporate the RA data.

  20. Improvement in Geoid Models for Ocean Circulation Studies

    Science.gov (United States)

    Tapley, Byron D.; Chambers, Don P.; Poole, Steve; Ries, John c.

    2003-01-01

    At wavelengths of 500 km and longer, the GRACE GGM01 Model produces a significantly better marine geoid than any previous model. This conclusion follows from evaluating the geostrophic currents determined by combining the model with a mean sea surface from altimetry. The agreement with currents computed from a traditional hydrographic map is very close, which suggests that one of the primary missions of the TOPEX/POSEIDON mission, to determine the absolute dynamic ocean topography, may soon be met. This solution has been made available to the public at http://www.csr.utexs.edu/grace/gravity. The results reported in this paper have been presented at the 2003 EGS-AGU-EUG Joint Assembly. Two articles are currently being prepared for Geophysical Research Letters to summarize these results.

  1. Micro-phytoplankton photosynthesis, primary production and potential export production in the Atlantic Ocean

    Science.gov (United States)

    Tilstone, Gavin H.; Lange, Priscila K.; Misra, Ankita; Brewin, Robert J. W.; Cain, Terry

    2017-11-01

    Micro-phytoplankton is the >20 μm component of the phytoplankton community and plays a major role in the global ocean carbon pump, through the sequestering of anthropogenic CO2 and export of organic carbon to the deep ocean. To evaluate the global impact of the marine carbon cycle, quantification of micro-phytoplankton primary production is paramount. In this paper we use both in situ data and a satellite model to estimate the contribution of micro-phytoplankton to total primary production (PP) in the Atlantic Ocean. From 1995 to 2013, 940 measurements of primary production were made at 258 sites on 23 Atlantic Meridional Transect Cruises from the United Kingdom to the South African or Patagonian Shelf. Micro-phytoplankton primary production was highest in the South Subtropical Convergence (SSTC ∼ 409 ± 720 mg C m-2 d-1), where it contributed between 38 % of the total PP, and was lowest in the North Atlantic Gyre province (NATL ∼ 37 ± 27 mg C m-2 d-1), where it represented 18 % of the total PP. Size-fractionated photosynthesis-irradiance (PE) parameters measured on AMT22 and 23 showed that micro-phytoplankton had the highest maximum photosynthetic rate (PmB) (∼5 mg C (mg Chl a)-1 h-1) followed by nano- (∼4 mg C (mg Chl a)-1 h-1) and pico- (∼2 mg C (mg Chl a)-1 h-1). The highest PmB was recorded in the NATL and lowest in the North Atlantic Drift Region (NADR) and South Atlantic Gyre (SATL). The PE parameters were used to parameterise a remote sensing model of size-fractionated PP, which explained 84 % of the micro-phytoplankton in situ PP variability with a regression slope close to 1. The model was applied to the SeaWiFS time series from 1998-2010, which illustrated that micro-phytoplankton PP remained constant in the NADR, NATL, Canary Current Coastal upwelling (CNRY), Eastern Tropical Atlantic (ETRA), Western Tropical Atlantic (WTRA) and SATL, but showed a gradual increase in the Benguela Upwelling zone (BENG) and South Subtropical Convergence (SSTC

  2. Ocean sea-ice modelling in the Southern Ocean around Indian ...

    Indian Academy of Sciences (India)

    Anurag Kumar

    2017-07-21

    Jul 21, 2017 ... Several modelling (sensitivity) studies have been performed to understand southern ocean sea ice variability (Zhang 2007; Stossel et al. 2011; Hol- land et al. ... sel et al. 2011) and ice-shelf melt water (Hellmer. 2004). ..... Campin J M, Marshall J and Ferreira D 2008 Sea ice–ocean coupling using a ...

  3. A fully-implicit model of the global ocean circulation

    NARCIS (Netherlands)

    Weijer, Wilbert; Dijkstra, Henk A.; Öksüzoğlu, Hakan; Wubs, Fred W.; Niet, Arie C. de

    2003-01-01

    With the recent developments in the solution methods for large-dimensional nonlinear algebraic systems, fully-implicit ocean circulation models are now becoming feasible. In this paper, the formulation of such a three-dimensional global ocean model is presented. With this implicit model, the

  4. Estimates of Southern Ocean primary production—constraints from predator carbon demand and nutrient drawdown

    Science.gov (United States)

    Priddle, J.; Boyd, I. L.; Whitehouse, M. J.; Murphy, E. J.; Croxall, J. P.

    1998-11-01

    In view of the wide range of estimates for the total primary production for the Southern Ocean south of the Subantarctic Front—current estimates range from 1.2 to 3.5 Gtonne C year -1—we have examined two indirect methods for assessing primary production. First, we have estimated the primary production needed to sustain the carbon requirements of the endotherm top predators in the ecosystem. Estimation of the carbon requirements for crabeater seals of about 7 Mtonne C year -1 is extrapolated to a value for all endotherm predators of 15-30 Mtonne C year -1. Current data indicate that 70-80% of the diet of this suite of predators is zooplankton (predominantly the euphausiid krill), making for highly efficient transfer from primary production to top predators. Our best estimate of Southern Ocean primary production by this method is of the order of 1.7 Gtonne C year -1, or an averaged areal primary production of about 30-40 g C m -2 year -1. Our second approach is to estimate primary production from the drawdown of inorganic nutrients, based on the limited suite of studies from which an annual nutrient deficit can be calculated. Again, this indicates annual primary production of the order of 1.5 Gtonne. Although both methods have inherent uncertainties, taken together they provide a relatively robust constraint on annual primary production. For both methods to underestimate primary production by the 1-1.5 Gtonne C implied by the higher current estimates, carbon export from the Southern Ocean pelagic ecosystem would need to be much higher than is normally found in other oceans.

  5. Modeling the ocean effect of geomagnetic storms

    DEFF Research Database (Denmark)

    Olsen, Nils; Kuvshinov, A.

    2004-01-01

    At coastal sites, geomagnetic variations for periods shorter than a few days are strongly distorted by the conductivity of the nearby sea-water. This phenomena, known as the ocean (or coast) effect, is strongest in the magnetic vertical component. We demonstrate the ability to predict the ocean...... if the oceans are considered. Our analysis also indicates a significant local time asymmetry (i.e., contributions from spherical harmonics other than P-I(0)), especially during the main phase of the storm....

  6. Wintertime Arctic Ocean sea water properties and primary marine aerosol concentrations

    Directory of Open Access Journals (Sweden)

    J. Zábori

    2012-11-01

    Full Text Available Sea spray aerosols are an important part of the climate system through their direct and indirect effects. Due to the diminishing sea ice, the Arctic Ocean is one of the most rapidly changing sea spray aerosol source areas. However, the influence of these changes on primary particle production is not known.

    In laboratory experiments we examined the influence of Arctic Ocean water temperature, salinity, and oxygen saturation on primary particle concentration characteristics. Sea water temperature was identified as the most important of these parameters. A strong decrease in sea spray aerosol production with increasing water temperature was observed for water temperatures between −1°C and 9°C. Aerosol number concentrations decreased from at least 1400 cm−3 to 350 cm−3. In general, the aerosol number size distribution exhibited a robust shape with one mode close to dry diameter Dp 0.2 μm with approximately 45% of particles at smaller sizes. Changes in sea water temperature did not result in pronounced change of the shape of the aerosol size distribution, only in the magnitude of the concentrations. Our experiments indicate that changes in aerosol emissions are most likely linked to changes of the physical properties of sea water at low temperatures. The observed strong dependence of sea spray aerosol concentrations on sea water temperature, with a large fraction of the emitted particles in the typical cloud condensation nuclei size range, provide strong arguments for a more careful consideration of this effect in climate models.

  7. Temperature dependence of CO2-enhanced primary production in the European Arctic Ocean

    KAUST Repository

    Holding, J. M.

    2015-08-31

    The Arctic Ocean is warming at two to three times the global rate1 and is perceived to be a bellwether for ocean acidification2, 3. Increased CO2 concentrations are expected to have a fertilization effect on marine autotrophs4, and higher temperatures should lead to increased rates of planktonic primary production5. Yet, simultaneous assessment of warming and increased CO2 on primary production in the Arctic has not been conducted. Here we test the expectation that CO2-enhanced gross primary production (GPP) may be temperature dependent, using data from several oceanographic cruises and experiments from both spring and summer in the European sector of the Arctic Ocean. Results confirm that CO2 enhances GPP (by a factor of up to ten) over a range of 145–2,099 μatm; however, the greatest effects are observed only at lower temperatures and are constrained by nutrient and light availability to the spring period. The temperature dependence of CO2-enhanced primary production has significant implications for metabolic balance in a warmer, CO2-enriched Arctic Ocean in the future. In particular, it indicates that a twofold increase in primary production during the spring is likely in the Arctic.

  8. Achieving Value in Primary Care: The Primary Care Value Model.

    Science.gov (United States)

    Rollow, William; Cucchiara, Peter

    2016-03-01

    The patient-centered medical home (PCMH) model provides a compelling vision for primary care transformation, but studies of its impact have used insufficiently patient-centered metrics with inconsistent results. We propose a framework for defining patient-centered value and a new model for value-based primary care transformation: the primary care value model (PCVM). We advocate for use of patient-centered value when measuring the impact of primary care transformation, recognition, and performance-based payment; for financial support and research and development to better define primary care value-creating activities and their implementation; and for use of the model to support primary care organizations in transformation. © 2016 Annals of Family Medicine, Inc.

  9. A new parallelization algorithm of ocean model with explicit scheme

    Science.gov (United States)

    Fu, X. D.

    2017-08-01

    This paper will focus on the parallelization of ocean model with explicit scheme which is one of the most commonly used schemes in the discretization of governing equation of ocean model. The characteristic of explicit schema is that calculation is simple, and that the value of the given grid point of ocean model depends on the grid point at the previous time step, which means that one doesn’t need to solve sparse linear equations in the process of solving the governing equation of the ocean model. Aiming at characteristics of the explicit scheme, this paper designs a parallel algorithm named halo cells update with tiny modification of original ocean model and little change of space step and time step of the original ocean model, which can parallelize ocean model by designing transmission module between sub-domains. This paper takes the GRGO for an example to implement the parallelization of GRGO (Global Reduced Gravity Ocean model) with halo update. The result demonstrates that the higher speedup can be achieved at different problem size.

  10. A Coupled Ocean General Circulation, Biogeochemical, and Radiative Model of the Global Oceans: Seasonal Distributions of Ocean Chlorophyll and Nutrients

    Science.gov (United States)

    Gregg, Watson W.; Busalacchi, Antonio (Technical Monitor)

    2000-01-01

    A coupled ocean general circulation, biogeochemical, and radiative model was constructed to evaluate and understand the nature of seasonal variability of chlorophyll and nutrients in the global oceans. Biogeochemical processes in the model are determined from the influences of circulation and turbulence dynamics, irradiance availability. and the interactions among three functional phytoplankton groups (diatoms. chlorophytes, and picoplankton) and three nutrients (nitrate, ammonium, and silicate). Basin scale (greater than 1000 km) model chlorophyll results are in overall agreement with CZCS pigments in many global regions. Seasonal variability observed in the CZCS is also represented in the model. Synoptic scale (100-1000 km) comparisons of imagery are generally in conformance although occasional departures are apparent. Model nitrate distributions agree with in situ data, including seasonal dynamics, except for the equatorial Atlantic. The overall agreement of the model with satellite and in situ data sources indicates that the model dynamics offer a reasonably realistic simulation of phytoplankton and nutrient dynamics on synoptic scales. This is especially true given that initial conditions are homogenous chlorophyll fields. The success of the model in producing a reasonable representation of chlorophyll and nutrient distributions and seasonal variability in the global oceans is attributed to the application of a generalized, processes-driven approach as opposed to regional parameterization and the existence of multiple phytoplankton groups with different physiological and physical properties. These factors enable the model to simultaneously represent many aspects of the great diversity of physical, biological, chemical, and radiative environments encountered in the global oceans.

  11. Ocean sea-ice modelling in the Southern Ocean around Indian ...

    Indian Academy of Sciences (India)

    An eddy-resolving coupled ocean sea-ice modelling is carried out in the Southern Ocean region (9∘–78∘E; 51∘–71∘S) using the MITgcm. The model domain incorporates the Indian Antarctic stations, Maitri (11.7∘E; 70.7∘S) and Bharati (76.1∘E; 69.4∘S). The realistic simulation of the surface variables, namely, sea ...

  12. Global Modeling Study of the Bioavailable Atmospheric Iron Supply to the Global Ocean

    Science.gov (United States)

    Myriokefalitakis, S.; Krol, M. C.; van Noije, T.; Le Sager, P.

    2017-12-01

    Atmospheric deposition of trace constituents acts as a nutrient source to the open ocean and affect marine ecosystem. Dust is known as a major source of nutrients to the global ocean, but only a fraction of these nutrients is released in a bioavailable form that can be assimilated by the marine biota. Iron (Fe) is a key micronutrient that significantly modulates gross primary production in the High-Nutrient-Low-Chlorophyll (HNLC) oceans, where macronutrients like nitrate are abundant, but primary production is limited by Fe scarcity. The global atmospheric Fe cycle is here parameterized in the state-of-the-art global Earth System Model EC-Earth. The model takes into account the primary emissions of both insoluble and soluble Fe forms, associated with mineral dust and combustion aerosols. The impact of atmospheric acidity and organic ligands on mineral dissolution processes, is parameterized based on updated experimental and theoretical findings. Model results are also evaluated against available observations. Overall, the link between the labile Fe atmospheric deposition and atmospheric composition changes is here demonstrated and quantified. This work has been financed by the Marie-Curie H2020-MSCA-IF-2015 grant (ID 705652) ODEON (Online DEposition over OceaNs; modeling the effect of air pollution on ocean bio-geochemistry in an Earth System Model).

  13. The impact of global warming on seasonality of ocean primary production

    Directory of Open Access Journals (Sweden)

    S. Henson

    2013-06-01

    Full Text Available The seasonal cycle (i.e. phenology of oceanic primary production (PP is expected to change in response to climate warming. Here, we use output from 6 global biogeochemical models to examine the response in the seasonal amplitude of PP and timing of peak PP to the IPCC AR5 warming scenario. We also investigate whether trends in PP phenology may be more rapidly detectable than trends in annual mean PP. The seasonal amplitude of PP decreases by an average of 1–2% per year by 2100 in most biomes, with the exception of the Arctic which sees an increase of ~1% per year. This is accompanied by an advance in the timing of peak PP by ~0.5–1 months by 2100 over much of the globe, and particularly pronounced in the Arctic. These changes are driven by an increase in seasonal amplitude of sea surface temperature (where the maxima get hotter faster than the minima and a decrease in the seasonal amplitude of the mixed layer depth and surface nitrate concentration. Our results indicate a transformation of currently strongly seasonal (bloom forming regions, typically found at high latitudes, into weakly seasonal (non-bloom regions, characteristic of contemporary subtropical conditions. On average, 36 yr of data are needed to detect a climate-change-driven trend in the seasonal amplitude of PP, compared to 32 yr for mean annual PP. Monthly resolution model output is found to be inadequate for resolving phenological changes. We conclude that analysis of phytoplankton seasonality is not necessarily a shortcut to detecting climate change impacts on ocean productivity.

  14. Trace metals in the open oceans:speciation modelling

    OpenAIRE

    Stockdale, Anthony; Tipping, Edward; Hamilton-Taylor, John; Lofts, Stephen

    2011-01-01

    The speciation of trace metals in the oceans is typically explained by invoking the concept of metal binding to specific organic ligands, but a lack of detailed knowledge about the ligands has impeded the formulation of comprehensive models to predict speciation chemistry. The aim of our study was to shed further light on the possible role of humic-type ligands in trace metal complexation in the oceans by comparing published seawater (open ocean) speciation measurements with predictions obtai...

  15. Biogeochemical modelling of dissolved oxygen in a changing ocean

    Science.gov (United States)

    Andrews, Oliver; Buitenhuis, Erik; Le Quéré, Corinne; Suntharalingam, Parvadha

    2017-08-01

    Secular decreases in dissolved oxygen concentration have been observed within the tropical oxygen minimum zones (OMZs) and at mid- to high latitudes over the last approximately 50 years. Earth system model projections indicate that a reduction in the oxygen inventory of the global ocean, termed ocean deoxygenation, is a likely consequence of on-going anthropogenic warming. Current models are, however, unable to consistently reproduce the observed trends and variability of recent decades, particularly within the established tropical OMZs. Here, we conduct a series of targeted hindcast model simulations using a state-of-the-art global ocean biogeochemistry model in order to explore and review biases in model distributions of oceanic oxygen. We show that the largest magnitude of uncertainty is entrained into ocean oxygen response patterns due to model parametrization of pCO2-sensitive C : N ratios in carbon fixation and imposed atmospheric forcing data. Inclusion of a pCO2-sensitive C : N ratio drives historical oxygen depletion within the ocean interior due to increased organic carbon export and subsequent remineralization. Atmospheric forcing is shown to influence simulated interannual variability in ocean oxygen, particularly due to differences in imposed variability of wind stress and heat fluxes. This article is part of the themed issue 'Ocean ventilation and deoxygenation in a warming world'.

  16. Biogeochemical modelling of dissolved oxygen in a changing ocean.

    Science.gov (United States)

    Andrews, Oliver; Buitenhuis, Erik; Le Quéré, Corinne; Suntharalingam, Parvadha

    2017-09-13

    Secular decreases in dissolved oxygen concentration have been observed within the tropical oxygen minimum zones (OMZs) and at mid- to high latitudes over the last approximately 50 years. Earth system model projections indicate that a reduction in the oxygen inventory of the global ocean, termed ocean deoxygenation, is a likely consequence of on-going anthropogenic warming. Current models are, however, unable to consistently reproduce the observed trends and variability of recent decades, particularly within the established tropical OMZs. Here, we conduct a series of targeted hindcast model simulations using a state-of-the-art global ocean biogeochemistry model in order to explore and review biases in model distributions of oceanic oxygen. We show that the largest magnitude of uncertainty is entrained into ocean oxygen response patterns due to model parametrization of p CO 2 -sensitive C : N ratios in carbon fixation and imposed atmospheric forcing data. Inclusion of a p CO 2 -sensitive C : N ratio drives historical oxygen depletion within the ocean interior due to increased organic carbon export and subsequent remineralization. Atmospheric forcing is shown to influence simulated interannual variability in ocean oxygen, particularly due to differences in imposed variability of wind stress and heat fluxes.This article is part of the themed issue 'Ocean ventilation and deoxygenation in a warming world'. © 2017 The Author(s).

  17. Ocean wave prediction using numerical and neural network models

    Digital Repository Service at National Institute of Oceanography (India)

    Mandal, S.; Prabaharan, N.

    This paper presents an overview of the development of the numerical wave prediction models and recently used neural networks for ocean wave hindcasting and forecasting. The numerical wave models express the physical concepts of the phenomena...

  18. Sea ice phenology and timing of primary production pulses in the Arctic Ocean.

    Science.gov (United States)

    Ji, Rubao; Jin, Meibing; Varpe, Øystein

    2013-03-01

    Arctic organisms are adapted to the strong seasonality of environmental forcing. A small timing mismatch between biological processes and the environment could potentially have significant consequences for the entire food web. Climate warming causes shrinking ice coverage and earlier ice retreat in the Arctic, which is likely to change the timing of primary production. In this study, we test predictions on the interactions among sea ice phenology and production timing of ice algae and pelagic phytoplankton. We do so using the following (1) a synthesis of available satellite observation data; and (2) the application of a coupled ice-ocean ecosystem model. The data and model results suggest that, over a large portion of the Arctic marginal seas, the timing variability in ice retreat at a specific location has a strong impact on the timing variability in pelagic phytoplankton peaks, but weak or no impact on the timing of ice-algae peaks in those regions. The model predicts latitudinal and regional differences in the timing of ice algae biomass peak (varying from April to May) and the time lags between ice algae and pelagic phytoplankton peaks (varying from 45 to 90 days). The correlation between the time lag and ice retreat is significant in areas where ice retreat has no significant impact on ice-algae peak timing, suggesting that changes in pelagic phytoplankton peak timing control the variability in time lags. Phenological variability in primary production is likely to have consequences for higher trophic levels, particularly for the zooplankton grazers, whose main food source is composed of the dually pulsed algae production of the Arctic. © 2012 Blackwell Publishing Ltd.

  19. Self-organized Criticality Model for Ocean Internal Waves

    International Nuclear Information System (INIS)

    Wang Gang; Hou Yijun; Lin Min; Qiao Fangli

    2009-01-01

    In this paper, we present a simple spring-block model for ocean internal waves based on the self-organized criticality (SOC). The oscillations of the water blocks in the model display power-law behavior with an exponent of -2 in the frequency domain, which is similar to the current and sea water temperature spectra in the actual ocean and the universal Garrett and Munk deep ocean internal wave model [Geophysical Fluid Dynamics 2 (1972) 225; J. Geophys. Res. 80 (1975) 291]. The influence of the ratio of the driving force to the spring coefficient to SOC behaviors in the model is also discussed. (general)

  20. A simple model of the effect of ocean ventilation on ocean heat uptake

    Energy Technology Data Exchange (ETDEWEB)

    Nadiga, Balasubramanya T. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Urban, Nathan Mark [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2018-01-27

    Presentation includes slides on Earth System Models vs. Simple Climate Models; A Popular SCM: Energy Balance Model of Anomalies; On calibrating against one ESM experiment, the SCM correctly captures that ESM's surface warming response with other forcings; Multi-Model Analysis: Multiple ESMs, Single SCM; Posterior Distributions of ECS; However In Excess of 90% of TOA Energy Imbalance is Sequestered in the World Oceans; Heat Storage in the Two Layer Model; Heat Storage in the Two Layer Model; Including TOA Rad. Imbalance and Ocean Heat in Calibration Improves Repr., but Significant Errors Persist; Improved Vertical Resolution Does Not Fix Problem; A Series of Expts. Confirms That Anomaly-Diffusing Models Cannot Properly Represent Ocean Heat Uptake; Physics of the Thermocline; Outcropping Isopycnals and Horizontally-Averaged Layers; Local interactions between outcropping isopycnals leads to non-local interactions between horizontally-averaged layers; Both Surface Warming and Ocean Heat are Well Represented With Just 4 Layers; A Series of Expts. Confirms That When Non-Local Interactions are Allowed, the SCMs Can Represent Both Surface Warming and Ocean Heat Uptake; and Summary and Conclusions.

  1. Advancing coastal ocean modelling, analysis, and prediction for the US Integrated Ocean Observing System

    Science.gov (United States)

    Wilkin, John L.; Rosenfeld, Leslie; Allen, Arthur; Baltes, Rebecca; Baptista, Antonio; He, Ruoying; Hogan, Patrick; Kurapov, Alexander; Mehra, Avichal; Quintrell, Josie; Schwab, David; Signell, Richard; Smith, Jane

    2017-01-01

    This paper outlines strategies that would advance coastal ocean modelling, analysis and prediction as a complement to the observing and data management activities of the coastal components of the US Integrated Ocean Observing System (IOOS®) and the Global Ocean Observing System (GOOS). The views presented are the consensus of a group of US-based researchers with a cross-section of coastal oceanography and ocean modelling expertise and community representation drawn from Regional and US Federal partners in IOOS. Priorities for research and development are suggested that would enhance the value of IOOS observations through model-based synthesis, deliver better model-based information products, and assist the design, evaluation, and operation of the observing system itself. The proposed priorities are: model coupling, data assimilation, nearshore processes, cyberinfrastructure and model skill assessment, modelling for observing system design, evaluation and operation, ensemble prediction, and fast predictors. Approaches are suggested to accomplish substantial progress in a 3–8-year timeframe. In addition, the group proposes steps to promote collaboration between research and operations groups in Regional Associations, US Federal Agencies, and the international ocean research community in general that would foster coordination on scientific and technical issues, and strengthen federal–academic partnerships benefiting IOOS stakeholders and end users.

  2. Solving large linear systems in an implicit thermohaline ocean model

    NARCIS (Netherlands)

    de Niet, Arie Christiaan

    2007-01-01

    The climate on earth is largely determined by the global ocean circulation. Hence it is important to predict how the flow will react to perturbation by for example melting icecaps. To answer questions about the stability of the global ocean flow, a computer model has been developed that is able to

  3. Modelling salt finger formation using the Imperial College Ocean Model

    Science.gov (United States)

    MacTavish, F. P.; Cotter, C. J.; Piggott, M. D.

    2009-04-01

    We present numerical simulations of salt finger formation produced using the Imperial College Ocean Model (ICOM) which is a finite element model using adaptive meshing. Our aim is to validate the model against published data and to develop the capability to simulate salt finger formation using adaptive meshes. Salt fingering is a form of double-diffusion which occurs because heat diffuses more quickly than salt. When an area of warm, salty water overlies an area of colder, fresher water, an initial perturbation can lead to some of the water from the lower layer moving into the top layer. Its temperature then increases more quickly than its salinity, so that the water is less dense than its surroundings and it will rise up more. This process repeats to form salt fingers, with salt fingers also forming in the downward direction. Salt fingers play a role in oceanic mixing, in particular they are responsible for maintaining thermohaline staircases such as the C-SALT staircase which have been observed extensively, particularly in the tropics. The study of salt fingers could therefore improve our understanding of processes in the ocean, and inform the design of subgrid parameterisations in general circulation models. We used the salt finger formation test case of Oezgoekmen et al (1998) in order to validate ICOM. The formation of salt fingers is modelled by solving the Navier-Stokes equations for a two-dimensional rectangular area of Boussinesq fluid, beginning with two layers of water, the top warm and salty and the bottom cold and fresh, with parameters chosen to match the test case of Oezgoekmen et al (1998). The positions of the interfaces between the fingering layer and the mixed layers as well as the finger growth rate and the kinetic energy are plotted against time. The results are compared with those of Oezgoekmen et al (1998). We present results from structured meshes and preliminary results using adaptive meshing.

  4. Simulating radiocarbon in the ocean model of the FAMOUS GCM

    Science.gov (United States)

    Dentith, Jennifer; Ivanovic, Ruza; Gregoire, Lauren; Tindall, Julia; Robinson, Laura F.

    2017-04-01

    Carbon isotopes are often utilised as proxies for palaeoceanographic circulation. However, discrepancies exist in the interpretation of isotopes in geological archives. A powerful approach for improving our understanding of palaeodata is to directly simulate multiple isotopic tracer fields within complex numerical models, thereby enabling model output to be compared directly to observations rather than the more uncertain climatic interpretations. We added the radioactive isotope 14C to the ocean component of the FAMOUS atmosphere-ocean General Circulation Model to examine ocean circulation, the oceanic carbon cycle, and air-sea gas exchange. The abiotic 14C tracer field is calculated based on air-sea gas exchange, advection and radioactive decay. A 10,000 year spin-up simulation was run to allow 14C concentrations in the deep ocean to equilibrate. Here, we compare the modelled 14C distributions in both the pre- and post-bomb era to published 14C compilations. We also discuss methods for overcoming model drifts in the marine hydrological cycle and their impact on deep ocean circulation. The overall aim is to use the isotope-enabled model to investigate the 14C fingerprint of different states of overturning circulation and to reach a better understanding of changes in ocean circulation and the carbon cycle at the Last Glacial Maximum (21,000 years ago) and during the last deglaciation (21,000-11,000 years ago).

  5. NASA Ocean Biogeochemical Model assimilating ESRID data global monthly 2/3x1.25 degrees VR2014

    Data.gov (United States)

    National Aeronautics and Space Administration — NASA Ocean Biogeochemical Model -- Assimilated Monthly Data The NASA Ocean Biogeochemical Model (NOBM) is a comprehensive, interactive ocean biogeochemical model...

  6. Linking source region and ocean wave parameters with the observed primary microseismic noise

    Science.gov (United States)

    Juretzek, C.; Hadziioannou, C.

    2017-12-01

    In previous studies, the contribution of Love waves to the primary microseismic noise field was found to be comparable to those of Rayleigh waves. However, so far only few studies analysed both wave types present in this microseismic noise band, which is known to be generated in shallow water and the theoretical understanding has mainly evolved for Rayleigh waves only. Here, we study the relevance of different source region parameters on the observed primary microseismic noise levels of Love and Rayleigh waves simultaneously. By means of beamforming and correlation of seismic noise amplitudes with ocean wave heights in the period band between 12 and 15 s, we analysed how source areas of both wave types compare with each other around Europe. The generation effectivity in different source regions was compared to ocean wave heights, peak ocean gravity wave propagation direction and bathymetry. Observed Love wave noise amplitudes correlate comparably well with near coastal ocean wave parameters as Rayleigh waves. Some coastal regions serve as especially effective sources for one or the other wave type. These coincide not only with locations of high wave heights but also with complex bathymetry. Further, Rayleigh and Love wave noise amplitudes seem to depend equally on the local ocean wave heights, which is an indication for a coupled variation with swell height during the generation of both wave types. However, the wave-type ratio varies directionally. This observation likely hints towards a spatially varying importance of different source mechanisms or structural influences. Further, the wave-type ratio is modulated depending on peak ocean wave propagation directions which could indicate a variation of different source mechanism strengths but also hints towards an imprint of an effective source radiation pattern. This emphasizes that the inclusion of both wave types may provide more constraints for the understanding of acting generation mechanisms.

  7. A simple model of the effect of ocean ventilation on ocean heat uptake

    Science.gov (United States)

    Nadiga, Balu; Urban, Nathan

    2017-11-01

    Transport of water from the surface mixed layer into the ocean interior is achieved, in large part, by the process of ventilation-a process associated with outcropping isopycnals. Starting from such a configuration of outcropping isopycnals, we derive a simple model of the effect of ventilation on ocean uptake of anomalous radiative forcing. This model can be seen as an improvement of the popular anomaly-diffusing class of energy balance models (AD-EBM) that are routinely employed to analyze and emulate the warming response of both observed and simulated Earth system. We demonstrate that neither multi-layer, nor continuous-diffusion AD-EBM variants can properly represent both surface-warming and the vertical distribution of ocean heat uptake. The new model overcomes this deficiency. The simplicity of the models notwithstanding, the analysis presented and the necessity of the modification is indicative of the role played by processes related to the down-welling branch of global ocean circulation in shaping the vertical distribution of ocean heat uptake.

  8. Data assimilation with implicit ocean models

    NARCIS (Netherlands)

    Terwisscha van Scheltinga, A.D.

    2007-01-01

    The ocean is an important part of the climate system, controlling the climate variability on many time-scales. Climate change, for example, has been linked to changes in the thermohaline circulation. This thesis is motivated by theoretical results on the stability of this circulation, especially the

  9. Upper ocean ecosystem dynamics and iron cycling in a global three-dimensional model

    OpenAIRE

    Moore, J. Keith; Doney, Scott C; Lindsay, Keith

    2004-01-01

    A global three-dimensional marine ecosystem model with several key phytoplankton functional groups, multiple limiting nutrients, explicit iron cycling, and a mineral ballast/organic matter parameterization is run within a global ocean circulation model. The coupled biogeochemistry/ecosystem/circulation (BEC) model reproduces known basin-scale patterns of primary and export production, biogenic silica production, calcification, chlorophyll, macronutrient and dissolved iron concentrations. The ...

  10. Ocean (de)oxygenation from the Last Glacial Maximum to the twenty-first century: insights from Earth System models.

    Science.gov (United States)

    Bopp, L; Resplandy, L; Untersee, A; Le Mezo, P; Kageyama, M

    2017-09-13

    All Earth System models project a consistent decrease in the oxygen content of oceans for the coming decades because of ocean warming, reduced ventilation and increased stratification. But large uncertainties for these future projections of ocean deoxygenation remain for the subsurface tropical oceans where the major oxygen minimum zones are located. Here, we combine global warming projections, model-based estimates of natural short-term variability, as well as data and model estimates of the Last Glacial Maximum (LGM) ocean oxygenation to gain some insights into the major mechanisms of oxygenation changes across these different time scales. We show that the primary uncertainty on future ocean deoxygenation in the subsurface tropical oceans is in fact controlled by a robust compensation between decreasing oxygen saturation (O 2sat ) due to warming and decreasing apparent oxygen utilization (AOU) due to increased ventilation of the corresponding water masses. Modelled short-term natural variability in subsurface oxygen levels also reveals a compensation between O 2sat and AOU, controlled by the latter. Finally, using a model simulation of the LGM, reproducing data-based reconstructions of past ocean (de)oxygenation, we show that the deoxygenation trend of the subsurface ocean during deglaciation was controlled by a combination of warming-induced decreasing O 2sat and increasing AOU driven by a reduced ventilation of tropical subsurface waters.This article is part of the themed issue 'Ocean ventilation and deoxygenation in a warming world'. © 2017 The Author(s).

  11. A Combined Foam-Spray Model for Ocean Microwave Radiometry

    National Research Council Canada - National Science Library

    Raizer, Victor

    2005-01-01

    Passive microwave emissions from oceanic dispersed media are considered. The spray is modeled by the aggregates of spherical water droplets, and the foam is represented by a macroscopic system of hollow spherical water shells...

  12. Improving Representation of the Nitrous Oxide Cycle in Ocean Biogeochemical Models

    Science.gov (United States)

    Suntharalingam, P.; Buitenhuis, E.; Le Quere, C.; O'Meara, S.; Nevison, C. D.; Bange, H. W.; Butler, J. H.; Elkins, J. W.

    2011-12-01

    The processes governing the marine nitrous oxide cycle, oceanic distribution, and flux to the atmosphere display distinct heterogeneity. The primary pathway for N2O production in the oxygenated open ocean is believed to be nitrification during the oxidation of ammonium to nitrate. However, mechanisms of marine N2O production and consumption display significant sensitivity to local oxygen concentration. Oxygen minimum zones such as the Arabian Sea and Eastern Equatorial Pacific are characterized by large gradients in sub-surface N2O, and high rates of N2O turnover that significantly exceed those observed in the open ocean. A range of processes is believed to govern N2O formation in these regions, including enhanced nitrification, and a coupling of nitrification and denitrification pathways. N2O is also depleted via denitrification in anoxic zones. This spatial heterogeneity presents challenges to the development of effective model parameterizations for ocean N2O; i.e., parameterizations that also display reliable predictive capability under conditions of changing ocean circulation, productivity, and oxygen distribution. In this analysis we use the ocean biogeochemistry model NEMO-PlankTOM to evaluate a range of recent empirical parameterizations for marine N2O formation. We contrast these parameterizations with a recently developed process-based model of oceanic N2O. Simulations are evaluated using a global database of oceanic N2O measurements. Evaluation metrics include surface concentrations, depth profiles, and regional averages. We also discuss the challenges of developing a successful representation of the marine N2O cycle, given specific limitations of the present generation of global ocean biogeochemistry models.

  13. Advances in a Distributed Approach for Ocean Model Data Interoperability

    Directory of Open Access Journals (Sweden)

    Richard P. Signell

    2014-03-01

    Full Text Available An infrastructure for earth science data is emerging across the globe based on common data models and web services. As we evolve from custom file formats and web sites to standards-based web services and tools, data is becoming easier to distribute, find and retrieve, leaving more time for science. We describe recent advances that make it easier for ocean model providers to share their data, and for users to search, access, analyze and visualize ocean data using MATLAB® and Python®. These include a technique for modelers to create aggregated, Climate and Forecast (CF metadata convention datasets from collections of non-standard Network Common Data Form (NetCDF output files, the capability to remotely access data from CF-1.6-compliant NetCDF files using the Open Geospatial Consortium (OGC Sensor Observation Service (SOS, a metadata standard for unstructured grid model output (UGRID, and tools that utilize both CF and UGRID standards to allow interoperable data search, browse and access. We use examples from the U.S. Integrated Ocean Observing System (IOOS® Coastal and Ocean Modeling Testbed, a project in which modelers using both structured and unstructured grid model output needed to share their results, to compare their results with other models, and to compare models with observed data. The same techniques used here for ocean modeling output can be applied to atmospheric and climate model output, remote sensing data, digital terrain and bathymetric data.

  14. Advances in a distributed approach for ocean model data interoperability

    Science.gov (United States)

    Signell, Richard P.; Snowden, Derrick P.

    2014-01-01

    An infrastructure for earth science data is emerging across the globe based on common data models and web services. As we evolve from custom file formats and web sites to standards-based web services and tools, data is becoming easier to distribute, find and retrieve, leaving more time for science. We describe recent advances that make it easier for ocean model providers to share their data, and for users to search, access, analyze and visualize ocean data using MATLAB® and Python®. These include a technique for modelers to create aggregated, Climate and Forecast (CF) metadata convention datasets from collections of non-standard Network Common Data Form (NetCDF) output files, the capability to remotely access data from CF-1.6-compliant NetCDF files using the Open Geospatial Consortium (OGC) Sensor Observation Service (SOS), a metadata standard for unstructured grid model output (UGRID), and tools that utilize both CF and UGRID standards to allow interoperable data search, browse and access. We use examples from the U.S. Integrated Ocean Observing System (IOOS®) Coastal and Ocean Modeling Testbed, a project in which modelers using both structured and unstructured grid model output needed to share their results, to compare their results with other models, and to compare models with observed data. The same techniques used here for ocean modeling output can be applied to atmospheric and climate model output, remote sensing data, digital terrain and bathymetric data.

  15. NW European shelf under climate warming: implications for open ocean – shelf exchange, primary production, and carbon absorption

    Directory of Open Access Journals (Sweden)

    M. Gröger

    2013-06-01

    Full Text Available Shelves have been estimated to account for more than one-fifth of the global marine primary production. It has been also conjectured that shelves strongly influence the oceanic absorption of anthropogenic CO2 (carbon shelf pump. Owing to their coarse resolution, currently applied global climate models are inappropriate to investigate the impact of climate change on shelves and regional models do not account for the complex interaction with the adjacent open ocean. In this study, a global ocean general circulation model and biogeochemistry model were set up with a distorted grid providing a maximal resolution for the NW European shelf and the adjacent northeast Atlantic. Using model climate projections we found that already a~moderate warming of about 2.0 K of the sea surface is linked with a reduction by ~ 30% of the biological production on the NW European shelf. If we consider the decline of anthropogenic riverine eutrophication since the 1990s, the reduction of biological production amounts is even larger. The relative decline of NW European shelf productivity is twice as strong as the decline in the open ocean (~ 15%. The underlying mechanism is a spatially well confined stratification feedback along the continental shelf break. This feedback reduces the nutrient supply from the deep Atlantic to about 50%. In turn, the reduced productivity draws down CO2 absorption in the North Sea by ~ 34% at the end of the 21st century compared to the end of the 20th century implying a strong weakening of shelf carbon pumping. Sensitivity experiments with diagnostic tracers indicate that not more than 20% of the carbon absorbed in the North Sea contributes to the long-term carbon uptake of the world ocean. The rest remains within the ocean's mixed layer where it is exposed to the atmosphere. The predicted decline in biological productivity, and decrease of phytoplankton concentration (in the North Sea by averaged 25% due to reduced nutrient imports from

  16. Ocean bottom pressure modeling for detection of seafloor vertical deformation

    Science.gov (United States)

    Inazu, D.; Hino, R.; Fujimoto, H.

    2009-12-01

    Detection of seafloor crustal deformation is a difficult problem in marine geodesy. Horizontal displacement of the ocean bottom has been detected with accuracy of several centimeters per year by the GPS/Acoustic positioning of seafloor reference points (Spiess et al. 1998). Meanwhile, bottom pressure observations can record the vertical deformation of seafloor and there have been many challenges to detect vertical seafloor displacement. However, ocean bottom pressure variations are highly dominated by oceanic signals such as tidal and subinertial motions. The tidal and other oceanic variations in bottom pressure records are mostly equivalent to several tens and several centimeters water height anomalies, respectively. Generally, the ocean tide is efficiently corrected. Non-tidal components are required to be accurately removed from the bottom pressure records so that the vertical displacement of less than ten centimeters, the expected amount of displacement caused by slow slip events often observed in several subduction zones, is detected by continuous bottom pressure monitoring. We examine the bottom pressure estimations derived from the Kalman filter and smoother runs of the ECCO (Estimating the Circulation & Climate of the Ocean) product to compare in-situ bottom pressure records. The assimilated bottom pressure moderately represents the seasonal variation, and hardly represents the variation with periods less than a few months. This high frequency variation is mainly explained by the barotropic phenomena induced by meteorological disturbances. Hirose et al. (2001) and Carrère and Lyard (2003) modeled the barotropic ocean motion with the forcing of atmospheric pressure loading and wind over global oceans for the sake of the correction of satellite observations. This study addresses the accurate bottom pressure modeling, which enables us to detect vertical displacement of several centimeters from the in-situ bottom pressure observations. We develop accurate

  17. Cryosphere-hydrosphere interactions: Numerical modeling using the Regional Ocean Modeling System (ROMS) at different scales

    International Nuclear Information System (INIS)

    Bergamasco, A.; Carniel, S.; Sclavo, M.; Budgell, W.P.

    2005-01-01

    Conveyor belt circulation controls global climate through heat and water fluxes with atmosphere and from tropical to polar regions and vice versa. This circulation, commonly referred to as thermohaline circulation (THC), seems to have millennium time scale and nowadays-a non-glacial period-appears to be as rather stable. However, concern is raised by the buildup of CO 2 and other greenhouse gases in the atmosphere (IPCC, Third assessment report: Climate Change 2001. A contribution 01 working group I, n and In to the Third Assessment Report of the intergovernmental Panel on Climate Change (Cambridge Univ. Press, UK) 2001, http://www.ipcc.ch) as these may affect the THC conveyor paths. Since it is widely recognized that dense water formation sites ad as primary sources in strengthening quasi-stable THC paths (Stommel H., Tellus, 13 (1961) 224), in order to simulate properly the consequences of such scenarios a better understanding of these oceanic processes is needed. To successfully model these processes, air sea-ice-integrated modelling approaches are often required. Here we focus on two polar regions using the Regional Ocean Modeling System (ROMS). In the first region investigated, the North Atlantic-Arctic, where open-ocean Jeep convection and open-sea ire formation and dispersion under the intense air-sea interactions are the major engines, we use a new version of the coupled hydrodynamic-ice ROMS model. The second area belongs to the Antarctica region inside the Southern Ocean, where brine rejections during ice formation inside shelf seas origin dense water that, flowing along the continental slope, overflow becoming eventually abyssal waters. Results show how nowadays integrated-modelling tasks have become more and more feasible and effective; numerical simulations dealing with large computational domains or challenging different climate scenarios can be run on multi-processors platforms and on systems like LINUX clusters, made of the same hardware as PCs, and

  18. Ocean biogeochemistry modeled with emergent trait-based genomics

    Science.gov (United States)

    Coles, V. J.; Stukel, M. R.; Brooks, M. T.; Burd, A.; Crump, B. C.; Moran, M. A.; Paul, J. H.; Satinsky, B. M.; Yager, P. L.; Zielinski, B. L.; Hood, R. R.

    2017-12-01

    Marine ecosystem models have advanced to incorporate metabolic pathways discovered with genomic sequencing, but direct comparisons between models and “omics” data are lacking. We developed a model that directly simulates metagenomes and metatranscriptomes for comparison with observations. Model microbes were randomly assigned genes for specialized functions, and communities of 68 species were simulated in the Atlantic Ocean. Unfit organisms were replaced, and the model self-organized to develop community genomes and transcriptomes. Emergent communities from simulations that were initialized with different cohorts of randomly generated microbes all produced realistic vertical and horizontal ocean nutrient, genome, and transcriptome gradients. Thus, the library of gene functions available to the community, rather than the distribution of functions among specific organisms, drove community assembly and biogeochemical gradients in the model ocean.

  19. Bifurcation analysis of 3D ocean flows using a parallel fully-implicit ocean model

    NARCIS (Netherlands)

    Thies, Jonas; Wubs, Fred; Dijkstra, Henk A.

    2009-01-01

    To understand the physics and dynamics of the ocean circulation, techniques of numerical bifurcation theory such as continuation methods have proved to be useful. Up to now these techniques have been applied to models with relatively few (O(10(5))) degrees of freedom such as multi-layer

  20. Bifurcation analysis of 3D ocean flows using a parallel fully-implicit ocean model

    NARCIS (Netherlands)

    Thies, J.; Wubs, F.W.; Dijkstra, H.A.

    2009-01-01

    To understand the physics and dynamics of the ocean circulation, techniques of numerical bifurcation theory such as continuation methods have proved to be useful. Up to now these techniques have been applied to models with relatively few degrees of freedom such as multi-layer quasi-geostrophic and

  1. An Arctic Ice/Ocean Coupled Model with Wave Interactions

    Science.gov (United States)

    2015-09-30

    The first investigates how the brine volume gradient between the surface and underside of the sea ice affects its rigidity and flexural strength and... Auckland , December 2014. Montiel, F. Transmission of ocean waves through a row of randomly perturbed circular ice floes. Minisymposium on Wave Motions of...2014 AUT Mathematical Sciences Symposium, Auckland , December 2014. Mosig, J. E. M. Rheological models of flexural-gravity waves in an ice covered ocean

  2. A simple metabolic model of glacial-interglacial energy supply to the upper ocean

    Science.gov (United States)

    Pelegrí, J. L.; Olivella, R.; García-Olivares, A.

    2011-03-01

    We use a simple two-state two-box ocean to simulate the CO2 signal during the last four glacial-interglacial transitions in the earth system. The model is inspired by the similarity in spatial organization and temporal transition patterns between the earth and other complex systems, such as mammals. The comparison identifies the earth's metabolic rate with net autotrophic primary production in the upper ocean, sustained through new inorganic carbon and nutrients advected from the deep ocean and organic matter remineralized within the upper ocean. We view the glacial-interglacial transition as a switch of the upper ocean from a basal to an enhanced metabolic state, with energy supply initially relying on the remineralization of the local organic sources and the eventual steady state resulting from the increased advective supply of inorganic deep sources. During the interglacial-glacial transition the opposite occurs, with an initial excess of advective supply and primary production that allows the replenishment of the upper-ocean organic storages. We set the relative change in energy supply from the CO2 signal and use genetic algorithms to explore the sensitivity of the model output to both the basal recirculation rate and the intensity-timing of the maximum recirculation rate. The model is capable of reproducing quite well the long-term oscillations, as shown by correlations with observations typically about 0.8. The dominant time scale for each cycle ranges between about 40 and 45 kyr, close to the 41 kyr average obliquity astronomical period, and the deep-ocean recirculation rate increases between one and two orders of magnitude from glacial to interglacial periods.

  3. Primary productivity, phytoplankton standing crop and physico-chemical characteristics of the Antarctic and adjacent central Indian Ocean waters

    Digital Repository Service at National Institute of Oceanography (India)

    JiyalalRam, M.

    Primary productivity, phytoplankton pigments and physico-chemical properties were studied in Antarctic waters and adjoining Indian Ocean between 11 degrees and 67 degrees E longitudes from polynya region (60 degrees S) to equator during the austral...

  4. The importance of time-stepping errors in ocean models

    Science.gov (United States)

    Williams, P. D.

    2011-12-01

    Many ocean models use leapfrog time stepping. The Robert-Asselin (RA) filter is usually applied after each leapfrog step, to control the computational mode. However, it will be shown in this presentation that the RA filter generates very large amounts of numerical diapycnal mixing. In some ocean models, the numerical diapycnal mixing from the RA filter is as large as the physical diapycnal mixing. This lowers our confidence in the fidelity of the simulations. In addition to the above problem, the RA filter also damps the physical solution and degrades the numerical accuracy. These two concomitant problems occur because the RA filter does not conserve the mean state, averaged over the three time slices on which it operates. The presenter has recently proposed a simple modification to the RA filter, which does conserve the three-time-level mean state. The modified filter has become known as the Robert-Asselin-Williams (RAW) filter. When used in conjunction with the leapfrog scheme, the RAW filter eliminates the numerical damping of the physical solution and increases the amplitude accuracy by two orders, yielding third-order accuracy. The phase accuracy is unaffected and remains second-order. The RAW filter can easily be incorporated into existing models of the ocean, typically via the insertion of just a single line of code. Better simulations are obtained, at almost no additional computational expense. Results will be shown from recent implementations of the RAW filter in various ocean models. For example, in the UK Met Office Hadley Centre ocean model, sea-surface temperature and sea-ice biases in the North Atlantic Ocean are found to be reduced. These improvements are encouraging for the use of the RAW filter in other ocean models.

  5. Variability of the oceanic bottom pressure from sensor observations and ocean models

    Science.gov (United States)

    Androsov, Alexey; Schröter, Jens; Danilov, Sergey; Lück, Christina; Kusche, Jürgen; Rietbroek, Roelof; Ren, Le; Schön, Steffen; Boebel, Olaf; Macrander, Andreas; Ivanciu, Ioana

    2017-04-01

    We discuss time series of ocean bottom pressure (OBP) computed by the Finite Element Sea Ice-Ocean Model (FESOM) driven by realistic forcing. The influence of atmospheric pressure and mesoscale eddies on the OBP and surface height anomalies on time scales up to years was investigated. Also, we estimated space and time scales of mass variability simulated by both climate-type (resolution about 1 degree) and eddy resolving (down to about 10 km) versions of the model. We analyze the African sector of the Southern Ocean. A part of the OBP variance there is associated with eddy activity (especially in the Agulhas region) and explore its respective contribution. Assessment of averaging interval of simulated data for the purpose of minimizing aliasing in variability of OBP is additionally carried out. An important aspect of this study is the comparison of modeled and in situ OBP records. High frequency measurements of OBP with sub-daily resolution available from Pressure Inverted Echo Sounders (PIES) used to infer temporal co-spectra of OBP variability. The PIES are placed along the prime meridian south of Africa can be used to evaluate variations of both barotropic and baroclinic geostrophic transport fluctuations of the Antarctic Circumpolar Current and verify corresponding GRACE estimates. The distance between PIES stations is chosen to resolve the major oceanic fronts for this region, which allows us to compare co-spectra of observed and simulated OBP variability.

  6. Oceanic sill-overflow systems: Investigations and simulation with the Poseidon ocean general circulation model

    Science.gov (United States)

    Anderson, Whit G.

    Marginal seas transport dense water into the oceanic system by deep gravity currents through sill-overflow systems. This dense water is essential in establishing background characteristics and the density driven component of the meridional overturing of the ocean. This thesis investigates the controlling dynamics and several modeling issues related to oceanic deep gravity currents. The objectives and questions of this study center on the development of a climate scale model that adequately simulates sill-overflow deep gravity currents. These questions include the sensitivity of the model to resolution and various turbulence parameterizations when modeling these systems. A hybrid generalized vertical coordinate model is adapted to address these questions. This study uses theoretical model domains based on the Dynamics of Mixing and Entrainment group (DOME). Current, climate scale models typically have horizontal resolutions ranging from 1/2 to 1 degree resolution. The bulk of the vertical resolution in layered models is commonly placed in density or pressure space centered around the equatorial upper ocean, well away from the regions containing the deep gravity currents investigated in this study. Models solutions from this study show large dependence on both horizontal and vertical resolution. When horizontal resolution is decreased from 5 to 20 km, entrainment of ambient water into the gravity current decreases by approximately a factor of 3. The deep gravity currents in the lower (20 km) resolution experiments are deeper, denser and have larger along-slope velocities than the higher resolution experiments (5 km). This difference is explained by the homogenization of the gravity current in lower resolution simulations. The 5 km simulations show higher magnitudes and spatial variability of momentum. This homogenization results in underestimation of the applied bottom stress in the model. With a lower bottom stress, the current does not have sufficient shearing to

  7. Colombian ocean waves and coasts modeled by special functions

    Science.gov (United States)

    Duque Tisnés, Simón

    2013-06-01

    Modeling the ocean bottom and surface of both Atlantic and Pacific Oceans near the Colombian coast is a subject of increasing attention due to the possibility of finding oil deposits that haven't been discovered, and as a way of monitoring the ocean limits of Colombia with other countries not only covering the possibility of naval intrusion but as a chance to detect submarine devices that are used by illegal groups for different unwished purposes. In the development of this topic it would be necessary to use Standard Hydrodynamic Equations to model the mathematical shape of ocean waves that will take differential equations forms. Those differential equations will be solved using computer algebra software and methods. The mentioned solutions will involve the use of Special Functions such as Bessel Functions, Whittaker, Heun, and so on. Using the Special Functions mentioned above, the obtained results will be simulated by numerical methods obtaining the typical patterns around the Colombian coasts (both surface and bottom). Using this simulation as a non-perturbed state, any change in the patter could be taken as an external perturbation caused by a strange body or device in an specific area or region modeled, building this simulation as an ocean radar or an unusual object finder. It's worth mentioning that the use of stronger or more rigorous methods and more advanced Special Functions would generate better theoretical results, building a more accurate simulation model that would lead to a finest detection.

  8. Arctic Ocean freshwater: How robust are model simulations?

    NARCIS (Netherlands)

    Jahn, A.; Aksenov, Y.; de Cuevas, B.A.; de Steur, L.; Häkkinen, S.; Hansen, E.; Herbaut, C.; Houssais, M.N.; Karcher, M.; Kauker, F.; Lique, C.; Nguyen, A.; Pemberton, P.; Worthen, D.; Zhang, J.

    2012-01-01

    The Arctic freshwater (FW) has been the focus of many modeling studies, due to the potential impact of Arctic FW on the deep water formation in the North Atlantic. A comparison of the hindcasts from ten ocean-sea ice models shows that the simulation of the Arctic FW budget is quite different in the

  9. Response of an ocean general circulation model to wind and ...

    Indian Academy of Sciences (India)

    The stretched-coordinate ocean general circulation model has been designed to study the observed variability due to wind and thermodynamic forcings. The model domain extends from 60°N to 60°S and cyclically continuous in the longitudinal direction. The horizontal resolution is 5° × 5° and 9 discrete vertical levels.

  10. Numerical modelling of floating debris in the world's oceans.

    Science.gov (United States)

    Lebreton, L C-M; Greer, S D; Borrero, J C

    2012-03-01

    A global ocean circulation model is coupled to a Lagrangian particle tracking model to simulate 30 years of input, transport and accumulation of floating debris in the world ocean. Using both terrestrial and maritime inputs, the modelling results clearly show the formation of five accumulation zones in the subtropical latitudes of the major ocean basins. The relative size and concentration of each clearly illustrate the dominance of the accumulation zones in the northern hemisphere, while smaller seas surrounded by densely populated areas are also shown to have a high concentration of floating debris. We also determine the relative contribution of different source regions to the total amount of material in a particular accumulation zone. This study provides a framework for describing the transport, distribution and accumulation of floating marine debris and can be continuously updated and adapted to assess scenarios reflecting changes in the production and disposal of plastic worldwide. Copyright © 2012 Elsevier Ltd. All rights reserved.

  11. Climate Ocean Modeling on a Beowulf Class System

    Science.gov (United States)

    Cheng, B. N.; Chao, Y.; Wang, P.; Bondarenko, M.

    2000-01-01

    With the growing power and shrinking cost of personal computers. the availability of fast ethernet interconnections, and public domain software packages, it is now possible to combine them to build desktop parallel computers (named Beowulf or PC clusters) at a fraction of what it would cost to buy systems of comparable power front supercomputer companies. This led as to build and assemble our own sys tem. specifically for climate ocean modeling. In this article, we present our experience with such a system, discuss its network performance, and provide some performance comparison data with both HP SPP2000 and Cray T3E for an ocean Model used in present-day oceanographic research.

  12. The impact of ocean tides on a climate model simulation.

    OpenAIRE

    M. Müller; H. Haak; J. Jungclaus; Maik Thomas;  

    2008-01-01

    We explicitly include the forcing of ocean tides in a global ocean general circulation model (OGCM). The tidal forcing is deduced from lunisolar ephemerides according to the instantaneous positions of moon and sun. In this real-time approach we consider the complete lunisolar tides of second degree. The OGCM is part of a state-of-the-art climate model which was used for the fourth assessment report simulations of the Intergovernmental Panel on Climate Change (IPCC). An ensemble of five IPCC A...

  13. Modelling ice-ocean interaction in ice shelf crevasses

    Science.gov (United States)

    Jordan, J. R.; Holland, P.; Piggott, M. D.; Jenkins, A.; Kimura, S.

    2013-12-01

    Ocean freezing within ice shelf basal crevasses could potentially act as a stabilising influence on ice shelves, however ice-ocean interaction and ocean dynamics within these crevasses are as yet poorly understood. To this end, an idealised two-dimensional model of an ice shelf basal crevasse has been developed using Fluidity-ICOM, a finite element ocean model using an unstructured mesh. A model of frazil ice formation and deposition has been incorporated into Fluidity-ICOM to better represent the freezing process. Model results show that freezing at the top of crevasses leads to the formation of an unstable overturning circulation due to the rejection of dense, salty water. The strength of this circulation, which is increased by the formation of frazil ice, is found to be the dominant factor influencing the total freezing rate. Frazil ice precipitation is found to be responsible for roughly one sixth of ice formation on the top of the basal crevasse, with direct freezing, enhanced by the complex dynamics of the overturning circulation, responsible for the rest. Increasing the frazil crystal radii used in the model has little impact on the amount of frazil ice deposition but does increase the amount of direct freezing. Significant melting and freezing was found to occur on the walls of the crevasse due to the strong overturning circulation. With previous modelling approaches it has not been possible to simulate this strong circulation, with water rising up one side of the crevasse and down the other.

  14. South Atlantic circulation in a world ocean model

    Directory of Open Access Journals (Sweden)

    M. H. England

    1994-08-01

    Full Text Available The circulation in the South Atlantic Ocean has been simulated within a global ocean general circulation model. Preliminary analysis of the modelled ocean circulation in the region indicates a rather close agreement of the simulated upper ocean flows with conventional notions of the large-scale geostrophic currents in the region. The modelled South Atlantic Ocean witnesses the return flow and export of North Atlantic Deep Water (NADW at its northern boundary, the inflow of a rather barotropic Antarctic Circumpolar Current (ACC through the Drake Passage, and the inflow of warm saline Agulhas water around the Cape of Good Hope. The Agulhas leakage amounts to 8.7 Sv, within recent estimates of the mass transport shed westward at the Agulhas retroflection. Topographic steering of the ACC dominates the structure of flow in the circumpolar ocean. The Benguela Current is seen to be fed by a mixture of saline Indian Ocean water (originating from the Agulhas Current and fresher Subantarctic surface water (originating in the ACC. The Benguela Current is seen to modify its flow and fate with depth; near the surface it flows north-westwards bifurcating most of its transport northward into the North Atlantic Ocean (for ultimate replacement of North Atlantic surface waters lost to the NADW conveyor. Deeper in the water column, more of the Benguela Current is destined to return with the Brazil Current, though northward flows are still generated where the Benguela Current extension encounters the coast of South America. At intermediate levels, these northward currents trace the flow of Antarctic Intermediate Water (AAIW equatorward, though even more AAIW is seen to recirculate poleward in the subtropical gyre. In spite of the model's rather coarse resolution, some subtle features of the Brazil-Malvinas Confluence are simulated rather well, including the latitude at which the two currents meet. Conceptual diagrams of the recirculation and interocean exchange of

  15. South Atlantic circulation in a world ocean model

    Directory of Open Access Journals (Sweden)

    Matthew H. England

    Full Text Available The circulation in the South Atlantic Ocean has been simulated within a global ocean general circulation model. Preliminary analysis of the modelled ocean circulation in the region indicates a rather close agreement of the simulated upper ocean flows with conventional notions of the large-scale geostrophic currents in the region. The modelled South Atlantic Ocean witnesses the return flow and export of North Atlantic Deep Water (NADW at its northern boundary, the inflow of a rather barotropic Antarctic Circumpolar Current (ACC through the Drake Passage, and the inflow of warm saline Agulhas water around the Cape of Good Hope. The Agulhas leakage amounts to 8.7 Sv, within recent estimates of the mass transport shed westward at the Agulhas retroflection. Topographic steering of the ACC dominates the structure of flow in the circumpolar ocean. The Benguela Current is seen to be fed by a mixture of saline Indian Ocean water (originating from the Agulhas Current and fresher Subantarctic surface water (originating in the ACC. The Benguela Current is seen to modify its flow and fate with depth; near the surface it flows north-westwards bifurcating most of its transport northward into the North Atlantic Ocean (for ultimate replacement of North Atlantic surface waters lost to the NADW conveyor. Deeper in the water column, more of the Benguela Current is destined to return with the Brazil Current, though northward flows are still generated where the Benguela Current extension encounters the coast of South America. At intermediate levels, these northward currents trace the flow of Antarctic Intermediate Water (AAIW equatorward, though even more AAIW is seen to recirculate poleward in the subtropical gyre. In spite of the model's rather coarse resolution, some subtle features of the Brazil-Malvinas Confluence are simulated rather well, including the latitude at which the two currents meet. Conceptual diagrams of the recirculation and interocean

  16. Sensitivity of ocean model simulation in the coastal ocean to the resolution of the meteorological forcing

    Science.gov (United States)

    Chen, Feng; Shapiro, Georgy; Thain, Richard

    2013-04-01

    The quality of ocean simulations depends on a number of factors such as approximations in governing equations, errors introduced by the numerical scheme, uncertainties in input parameters, and atmospheric forcing. The identification of relations between the uncertainties in input and output data is still a challenge for the development of numerical models. The impacts of ocean variables on ocean models are still not well known (e.g., Kara et al., 2009). Given the considerable importance of the atmospheric forcing to the air-sea interaction, it is essential that researchers in ocean modelling work need a good understanding about how sensitive the atmospheric forcing is to variations of model results, which is beneficial to the development of ocean models. Also, it provides a proper way to choose the atmospheric forcing in ocean modelling applications. Our previous study (Shapiro et al, 2011) has shown that the basin-wide circulation pattern and the temperature structure in the Black Sea produced by the same model is significantly dependent on the source of the meteorological input, giving remarkably different responses. For the purpose of this study we have chosen the Celtic Sea where high resolution meteo data are available from the UK Met office since 2006. The Celtic Sea is tidally dominated water basin, with the tidal stream amplitude varying from 0.25m/s in the southwest to 2 m/s in the Bristol Channel. It is also filled with mesoscale eddies which contribute to the formation of the residual (tidally averaged) circulation pattern (Young et al, 2003). The sea is strongly stratified from April to November, which adds to the formation of density driven currents. In this paper we analyse how sensitive the model output is to variations in the spatial resolution of meteorological using low (1.6°) and high (0.11°) resolution meteo forcing, giving the quantitative relation between variations of met forcing and the resulted differences of model results, as well as

  17. Arctic pathways of Pacific Water: Arctic Ocean Model Intercomparison experiments.

    Science.gov (United States)

    Aksenov, Yevgeny; Karcher, Michael; Proshutinsky, Andrey; Gerdes, Rüdiger; de Cuevas, Beverly; Golubeva, Elena; Kauker, Frank; Nguyen, An T; Platov, Gennady A; Wadley, Martin; Watanabe, Eiji; Coward, Andrew C; Nurser, A J George

    2016-01-01

    Pacific Water (PW) enters the Arctic Ocean through Bering Strait and brings in heat, fresh water, and nutrients from the northern Bering Sea. The circulation of PW in the central Arctic Ocean is only partially understood due to the lack of observations. In this paper, pathways of PW are investigated using simulations with six state-of-the art regional and global Ocean General Circulation Models (OGCMs). In the simulations, PW is tracked by a passive tracer, released in Bering Strait. Simulated PW spreads from the Bering Strait region in three major branches. One of them starts in the Barrow Canyon, bringing PW along the continental slope of Alaska into the Canadian Straits and then into Baffin Bay. The second begins in the vicinity of the Herald Canyon and transports PW along the continental slope of the East Siberian Sea into the Transpolar Drift, and then through Fram Strait and the Greenland Sea. The third branch begins near the Herald Shoal and the central Chukchi shelf and brings PW into the Beaufort Gyre. In the models, the wind, acting via Ekman pumping, drives the seasonal and interannual variability of PW in the Canadian Basin of the Arctic Ocean. The wind affects the simulated PW pathways by changing the vertical shear of the relative vorticity of the ocean flow in the Canada Basin.

  18. Arctic pathways of Pacific Water: Arctic Ocean Model Intercomparison experiments

    Science.gov (United States)

    Karcher, Michael; Proshutinsky, Andrey; Gerdes, Rüdiger; de Cuevas, Beverly; Golubeva, Elena; Kauker, Frank; Nguyen, An T.; Platov, Gennady A.; Wadley, Martin; Watanabe, Eiji; Coward, Andrew C.; Nurser, A. J. George

    2016-01-01

    Abstract Pacific Water (PW) enters the Arctic Ocean through Bering Strait and brings in heat, fresh water, and nutrients from the northern Bering Sea. The circulation of PW in the central Arctic Ocean is only partially understood due to the lack of observations. In this paper, pathways of PW are investigated using simulations with six state‐of‐the art regional and global Ocean General Circulation Models (OGCMs). In the simulations, PW is tracked by a passive tracer, released in Bering Strait. Simulated PW spreads from the Bering Strait region in three major branches. One of them starts in the Barrow Canyon, bringing PW along the continental slope of Alaska into the Canadian Straits and then into Baffin Bay. The second begins in the vicinity of the Herald Canyon and transports PW along the continental slope of the East Siberian Sea into the Transpolar Drift, and then through Fram Strait and the Greenland Sea. The third branch begins near the Herald Shoal and the central Chukchi shelf and brings PW into the Beaufort Gyre. In the models, the wind, acting via Ekman pumping, drives the seasonal and interannual variability of PW in the Canadian Basin of the Arctic Ocean. The wind affects the simulated PW pathways by changing the vertical shear of the relative vorticity of the ocean flow in the Canada Basin. PMID:27818853

  19. Formulation of an ocean model for global climate simulations

    Directory of Open Access Journals (Sweden)

    S. M. Griffies

    2005-01-01

    Full Text Available This paper summarizes the formulation of the ocean component to the Geophysical Fluid Dynamics Laboratory's (GFDL climate model used for the 4th IPCC Assessment (AR4 of global climate change. In particular, it reviews the numerical schemes and physical parameterizations that make up an ocean climate model and how these schemes are pieced together for use in a state-of-the-art climate model. Features of the model described here include the following: (1 tripolar grid to resolve the Arctic Ocean without polar filtering, (2 partial bottom step representation of topography to better represent topographically influenced advective and wave processes, (3 more accurate equation of state, (4 three-dimensional flux limited tracer advection to reduce overshoots and undershoots, (5 incorporation of regional climatological variability in shortwave penetration, (6 neutral physics parameterization for representation of the pathways of tracer transport, (7 staggered time stepping for tracer conservation and numerical efficiency, (8 anisotropic horizontal viscosities for representation of equatorial currents, (9 parameterization of exchange with marginal seas, (10 incorporation of a free surface that accomodates a dynamic ice model and wave propagation, (11 transport of water across the ocean free surface to eliminate unphysical ``virtual tracer flux' methods, (12 parameterization of tidal mixing on continental shelves. We also present preliminary analyses of two particularly important sensitivities isolated during the development process, namely the details of how parameterized subgridscale eddies transport momentum and tracers.

  20. Kawase & McDermott revisited with a proper ocean model.

    Science.gov (United States)

    Jochum, Markus; Poulsen, Mads; Nuterman, Roman

    2017-04-01

    A suite of experiments with global ocean models is used to test the hypothesis that Southern Ocean (SO) winds can modify the strength of the Atlantic Meridional Overturning Circulation (AMOC). It is found that for 3 and 1 degree resolution models the results are consistent with Toggweiler & Samuels (1995): stronger SO winds lead to a slight increase of the AMOC. In the simulations with 1/10 degree resolution, however, stronger SO winds weaken the AMOC. We show that these different outcomes are determined by the models' representation of topographic Rossby and Kelvin waves. Consistent with previous literature based on theory and idealized models, first baroclinic waves are slower in the coarse resolution models, but still manage to establish a pattern of global response that is similar to the one in the eddy-permitting model. Because of its different stratification, however, the Atlantic signal is transmitted by higher baroclinic modes. In the coarse resolution model these higher modes are dissipated before they reach 30N, whereas in the eddy-permitting model they reach the subpolar gyre undiminished. This inability of non-eddy-permitting ocean models to represent planetary waves with higher baroclinic modes casts doubt on the ability of climate models to represent non-local effects of climate change. Ideas on how to overcome these difficulties will be discussed.

  1. Equatorial Indian Ocean subsurface current variability in an Ocean General Circulation Model

    Science.gov (United States)

    Gnanaseelan, C.; Deshpande, Aditi

    2018-03-01

    The variability of subsurface currents in the equatorial Indian Ocean is studied using high resolution Ocean General Circulation Model (OGCM) simulations during 1958-2009. February-March eastward equatorial subsurface current (ESC) shows weak variability whereas strong variability is observed in northern summer and fall ESC. An eastward subsurface current with maximum amplitude in the pycnocline is prominent right from summer to winter during strong Indian Ocean Dipole (IOD) years when air-sea coupling is significant. On the other hand during weak IOD years, both the air-sea coupling and the ESC are weak. This strongly suggests the role of ESC on the strength of IOD. The extension of the ESC to the summer months during the strong IOD years strengthens the oceanic response and supports intensification and maintenance of IODs through modulation of air sea coupling. Although the ESC is triggered by equatorial winds, the coupled air-sea interaction associated with IODs strengthens the ESC to persist for several seasons thereby establishing a positive feedback cycle with the surface. This suggests that the ESC plays a significant role in the coupled processes associated with the evolution and intensification of IOD events by cooling the eastern basin and strengthening thermocline-SST (sea surface temperature) interaction. As the impact of IOD events on Indian summer monsoon is significant only during strong IOD years, understanding and monitoring the evolution of ESC during these years is important for summer monsoon forecasting purposes. There is a westward phase propagation of anomalous subsurface currents which persists for a year during strong IOD years, whereas such persistence or phase propagation is not seen during weak IOD years, supporting the close association between ESC and strength of air sea coupling during strong IOD years. In this study we report the processes which strengthen the IOD events and the air sea coupling associated with IOD. It also unravels

  2. Three-Dimensional Ocean Noise Modeling

    Science.gov (United States)

    2015-03-01

    realistic and complex three-dimensional bathymetry. This is achieved by using a parabolic equation [PE) propagation model and the reciprocity principle...explain the horizontal noise directionality observed in the Tonga Trench [Barclay, 2014], which was found not to be a 3D effect, but rather due to...modeled noise arriving on the axis of the canyon has significantly perturbed zero-crossings when compared to the equivalent Nx2D result. Theoretical

  3. Towards accounting for dissolved iron speciation in global ocean models

    Directory of Open Access Journals (Sweden)

    A. Tagliabue

    2011-10-01

    Full Text Available The trace metal iron (Fe is now routinely included in state-of-the-art ocean general circulation and biogeochemistry models (OGCBMs because of its key role as a limiting nutrient in regions of the world ocean important for carbon cycling and air-sea CO2 exchange. However, the complexities of the seawater Fe cycle, which impact its speciation and bioavailability, are simplified in such OGCBMs due to gaps in understanding and to avoid high computational costs. In a similar fashion to inorganic carbon speciation, we outline a means by which the complex speciation of Fe can be included in global OGCBMs in a reasonably cost-effective manner. We construct an Fe speciation model based on hypothesised relationships between rate constants and environmental variables (temperature, light, oxygen, pH, salinity and assumptions regarding the binding strengths of Fe complexing organic ligands and test hypotheses regarding their distributions. As a result, we find that the global distribution of different Fe species is tightly controlled by spatio-temporal environmental variability and the distribution of Fe binding ligands. Impacts on bioavailable Fe are highly sensitive to assumptions regarding which Fe species are bioavailable and how those species vary in space and time. When forced by representations of future ocean circulation and climate we find large changes to the speciation of Fe governed by pH mediated changes to redox kinetics. We speculate that these changes may exert selective pressure on phytoplankton Fe uptake strategies in the future ocean. In future work, more information on the sources and sinks of ocean Fe ligands, their bioavailability, the cycling of colloidal Fe species and kinetics of Fe-surface coordination reactions would be invaluable. We hope our modeling approach can provide a means by which new observations of Fe speciation can be tested against hypotheses of the processes present in governing the ocean Fe cycle in an

  4. Oceanic dispersion of Fukushima-derived Cs-137 in the coastal, offshore, and open oceans simulated by multiple oceanic general circulation models

    Science.gov (United States)

    Kawamura, H.; Furuno, A.; Kobayashi, T.; In, T.; Nakayama, T.; Ishikawa, Y.; Miyazawa, Y.; Usui, N.

    2017-12-01

    To understand the concentration and amount of Fukushima-derived Cs-137 in the ocean, this study simulates the oceanic dispersion of Cs-137 by an oceanic dispersion model SEA-GEARN-FDM developed at Japan Atomic Energy Agency (JAEA) and multiple oceanic general circulation models. The Cs-137 deposition amounts at the sea surface were used as the source term in oceanic dispersion simulations, which were estimated by atmospheric dispersion simulations with a Worldwide version of System for Prediction of Environmental Emergency Dose Information version II (WSPEEDI-II) developed at JAEA. The direct release from the Fukushima Daiichi Nuclear Power Plant into the ocean based on in situ Cs-137 measurements was used as the other source term in oceanic dispersion simulations. The simulated air Cs-137 concentrations qualitatively replicated those measured around the North Pacific. The accumulated Cs-137 ground deposition amount in the eastern Japanese Islands was consistent with that estimated by aircraft measurements. The oceanic dispersion simulations relatively well reproduced the measured Cs-137 concentrations in the coastal and offshore oceans during the first few months after the Fukushima disaster, and in the open ocean during the first year post-disaster. It was suggested that Cs-137 dispersed along the coast in the north-south direction during the first few months post-disaster, and were subsequently dispersed offshore by the Kuroshio Current and Kuroshio Extension. Mesoscale eddies accompanied by the Kuroshio Current and Kuroshio Extension played an important role in dilution of Cs-137. The Cs-137 amounts were quantified in the coastal, offshore, and open oceans during the first year post-disaster. It was demonstrated that Cs-137 actively dispersed from the coastal and offshore oceans to the open ocean, and from the surface layer to the deeper layer in the North Pacific.

  5. Exploiting Thread Parallelism for Ocean Modeling on Cray XC Supercomputers

    Energy Technology Data Exchange (ETDEWEB)

    Sarje, Abhinav [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Jacobsen, Douglas W. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Williams, Samuel W. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Ringler, Todd [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Oliker, Leonid [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2016-05-01

    The incorporation of increasing core counts in modern processors used to build state-of-the-art supercomputers is driving application development towards exploitation of thread parallelism, in addition to distributed memory parallelism, with the goal of delivering efficient high-performance codes. In this work we describe the exploitation of threading and our experiences with it with respect to a real-world ocean modeling application code, MPAS-Ocean. We present detailed performance analysis and comparisons of various approaches and configurations for threading on the Cray XC series supercomputers.

  6. Multiple stressors of ocean ecosystems in the 21st century: projections with CMIP5 models

    Directory of Open Access Journals (Sweden)

    L. Bopp

    2013-10-01

    Full Text Available Ocean ecosystems are increasingly stressed by human-induced changes of their physical, chemical and biological environment. Among these changes, warming, acidification, deoxygenation and changes in primary productivity by marine phytoplankton can be considered as four of the major stressors of open ocean ecosystems. Due to rising atmospheric CO2 in the coming decades, these changes will be amplified. Here, we use the most recent simulations performed in the framework of the Coupled Model Intercomparison Project 5 to assess how these stressors may evolve over the course of the 21st century. The 10 Earth system models used here project similar trends in ocean warming, acidification, deoxygenation and reduced primary productivity for each of the IPCC's representative concentration pathways (RCPs over the 21st century. For the "business-as-usual" scenario RCP8.5, the model-mean changes in the 2090s (compared to the 1990s for sea surface temperature, sea surface pH, global O2 content and integrated primary productivity amount to +2.73 (±0.72 °C, −0.33 (±0.003 pH unit, −3.45 (±0.44% and −8.6 (±7.9%, respectively. For the high mitigation scenario RCP2.6, corresponding changes are +0.71 (±0.45 °C, −0.07 (±0.001 pH unit, −1.81 (±0.31% and −2.0 (±4.1%, respectively, illustrating the effectiveness of extreme mitigation strategies. Although these stressors operate globally, they display distinct regional patterns and thus do not change coincidentally. Large decreases in O2 and in pH are simulated in global ocean intermediate and mode waters, whereas large reductions in primary production are simulated in the tropics and in the North Atlantic. Although temperature and pH projections are robust across models, the same does not hold for projections of subsurface O2 concentrations in the tropics and global and regional changes in net primary productivity. These high uncertainties in projections of primary productivity and subsurface

  7. The Finite Element Sea Ice-Ocean Model (FESOM v.1.4: formulation of an ocean general circulation model

    Directory of Open Access Journals (Sweden)

    Q. Wang

    2014-04-01

    Full Text Available The Finite Element Sea Ice-Ocean Model (FESOM is the first global ocean general circulation model based on unstructured-mesh methods that has been developed for the purpose of climate research. The advantage of unstructured-mesh models is their flexible multi-resolution modelling functionality. In this study, an overview of the main features of FESOM will be given; based on sensitivity experiments a number of specific parameter choices will be explained; and directions of future developments will be outlined. It is argued that FESOM is sufficiently mature to explore the benefits of multi-resolution climate modelling and that its applications will provide information useful for the advancement of climate modelling on unstructured meshes.

  8. The salinity effect in a mixed layer ocean model

    Science.gov (United States)

    Miller, J. R.

    1976-01-01

    A model of the thermally mixed layer in the upper ocean as developed by Kraus and Turner and extended by Denman is further extended to investigate the effects of salinity. In the tropical and subtropical Atlantic Ocean rapid increases in salinity occur at the bottom of a uniformly mixed surface layer. The most significant effects produced by the inclusion of salinity are the reduction of the deepening rate and the corresponding change in the heating characteristics of the mixed layer. If the net surface heating is positive, but small, salinity effects must be included to determine whether the mixed layer temperature will increase or decrease. Precipitation over tropical oceans leads to the development of a shallow stable layer accompanied by a decrease in the temperature and salinity at the sea surface.

  9. Modelling ocean-colour-derived chlorophyll a

    Directory of Open Access Journals (Sweden)

    S. Dutkiewicz

    2018-01-01

    Full Text Available This article provides a proof of concept for using a biogeochemical/ecosystem/optical model with a radiative transfer component as a laboratory to explore aspects of ocean colour. We focus here on the satellite ocean colour chlorophyll a (Chl a product provided by the often-used blue/green reflectance ratio algorithm. The model produces output that can be compared directly to the real-world ocean colour remotely sensed reflectance. This model output can then be used to produce an ocean colour satellite-like Chl a product using an algorithm linking the blue versus green reflectance similar to that used for the real world. Given that the model includes complete knowledge of the (model water constituents, optics and reflectance, we can explore uncertainties and their causes in this proxy for Chl a (called derived Chl a in this paper. We compare the derived Chl a to the actual model Chl a field. In the model we find that the mean absolute bias due to the algorithm is 22 % between derived and actual Chl a. The real-world algorithm is found using concurrent in situ measurement of Chl a and radiometry. We ask whether increased in situ measurements to train the algorithm would improve the algorithm, and find a mixed result. There is a global overall improvement, but at the expense of some regions, especially in lower latitudes where the biases increase. Not surprisingly, we find that region-specific algorithms provide a significant improvement, at least in the annual mean. However, in the model, we find that no matter how the algorithm coefficients are found there can be a temporal mismatch between the derived Chl a and the actual Chl a. These mismatches stem from temporal decoupling between Chl a and other optically important water constituents (such as coloured dissolved organic matter and detrital matter. The degree of decoupling differs regionally and over time. For example, in many highly seasonal regions, the timing of initiation

  10. 14C-age tracers in global ocean circulation models

    Science.gov (United States)

    Koeve, W.; Wagner, H.; Kähler, P.; Oschlies, A.

    2014-10-01

    The natural abundance of 14C in total CO2 dissolved in seawater is a property applied to evaluate the water age structure and circulation in the ocean and in ocean models. In this study we use three different representations of the global ocean circulation augmented with a suite of idealised tracers to study the potential and limitations of using natural 14C to determine water age, the time elapsed since a body of water had contact with the atmosphere. We find that, globally, bulk 14C-age is dominated by two equally important components, one associated with aging, i.e. the time component of circulation and one associated with a "preformed 14C-age". This latter quantity exists because of the slow and incomplete atmosphere/ocean equilibration of 14C in particular in high latitudes where many water masses form. The relative contribution of the preformed component to bulk 14C-age varies regionally within a given model, but also between models. Regional variability, e.g. in the Atlantic Ocean is associated with the mixing of waters with very different end members of preformed 14C-age. In the Atlantic, variations in the preformed component over space and time mask the circulation component to an extent that its patterns are not detectable from bulk 14C-age alone. Between models the variability of age can also be considerable (factor of 2), related to the combinations of physical model parameters, which influence circulation dynamics, and gas exchange in the models. The preformed component was found to be very sensitive to gas exchange and moderately sensitive to ice cover. In our model evaluation exercise, the choice of the gas exchange constant from within the current range of uncertainty had such a strong influence on preformed and bulk 14C-age that if model evaluation would be based on bulk 14C-age it could easily impair the evaluation and tuning of a models circulation on global and regional scales. Based on the results of this study, we propose that considering

  11. LiveOcean: A Daily Forecast Model of Ocean Acidification for Shellfish Growers

    Science.gov (United States)

    MacCready, P.; Siedlecki, S. A.; McCabe, R. M.

    2016-12-01

    The coastal estuaries of the NE Pacific host a highly productive shellfish industry, but in the past decade they have suffered from many years in which no natural set of oysters occurred. It appears that coastal waters with low Aragonite saturation state may be the cause. This "acidified" water is the result of (i) upwelling of NE Pacific water from near the shelf break that is already low in pH, and (ii) further acidification of that water by productivity and remineralization on the shelf, and (iii) increasing atmospheric CO2. As part of a coordinated research response to this issue, we have developed the LiveOcean modeling system, which creates daily three-day forecasts of circulation and biogeochemical properties in Oregon-Washington-British Columbia coastal and estuarine waters. The system includes realistic tides, atmospheric forcing (from a regional WRF model), ocean boundary conditions (from HYCOM), and rivers (from USGS and Environment Canada). The model is also used for Harmful Algal Bloom prediction. There has been extensive validation of hindcast runs for currents and hydrography, and more limited validation of biogeochemical variables. Model results are pushed daily to the cloud, and made available to the public through the NANOOS Visualization System (NVS). NVS also includes automated model-data comparisons with real-time NDBC and OOI moorings. Future work will focus on optimizing the utility of this system for regional shellfish growers.

  12. An ocean scatter propagation model for aeronautical satellite communication applications

    Science.gov (United States)

    Moreland, K. W.

    1990-01-01

    In this paper an ocean scattering propagation model, developed for aircraft-to-satellite (aeronautical) applications, is described. The purpose of the propagation model is to characterize the behavior of sea reflected multipath as a function of physical propagation path parameters. An accurate validation against the theoretical far field solution for a perfectly conducting sinusoidal surface is provided. Simulation results for typical L band aeronautical applications with low complexity antennas are presented.

  13. Toward An Internal Gravity Wave Spectrum In Global Ocean Models

    Science.gov (United States)

    2015-05-14

    Toward an internal gravity wave spectrum in global ocean models Malte Müller1,2, Brian K. Arbic3, James G. Richman4, Jay F. Shriver4, Eric L. Kunze5...fields and tides are beginning to display realistic internal gravity wave spectra, especially as model resolution increases. This paper examines...able to simulate the internal gravity wave spectrum and the extent to which nonlinear internal wave-wave interactions contribute to the simulated

  14. Accuracy Assessment of Recent Global Ocean Tide Models around Antarctica

    Science.gov (United States)

    Lei, J.; Li, F.; Zhang, S.; Ke, H.; Zhang, Q.; Li, W.

    2017-09-01

    Due to the coverage limitation of T/P-series altimeters, the lack of bathymetric data under large ice shelves, and the inaccurate definitions of coastlines and grounding lines, the accuracy of ocean tide models around Antarctica is poorer than those in deep oceans. Using tidal measurements from tide gauges, gravimetric data and GPS records, the accuracy of seven state-of-the-art global ocean tide models (DTU10, EOT11a, GOT4.8, FES2012, FES2014, HAMTIDE12, TPXO8) is assessed, as well as the most widely-used conventional model FES2004. Four regions (Antarctic Peninsula region, Amery ice shelf region, Filchner-Ronne ice shelf region and Ross ice shelf region) are separately reported. The standard deviations of eight main constituents between the selected models are large in polar regions, especially under the big ice shelves, suggesting that the uncertainty in these regions remain large. Comparisons with in situ tidal measurements show that the most accurate model is TPXO8, and all models show worst performance in Weddell sea and Filchner-Ronne ice shelf regions. The accuracy of tidal predictions around Antarctica is gradually improving.

  15. Understanding and Improving Ocean Mixing Parameterizations for modeling Climate Change

    Science.gov (United States)

    Howard, A. M.; Fells, J.; Clarke, J.; Cheng, Y.; Canuto, V.; Dubovikov, M. S.

    2017-12-01

    Climate is vital. Earth is only habitable due to the atmosphere&oceans' distribution of energy. Our Greenhouse Gas emissions shift overall the balance between absorbed and emitted radiation causing Global Warming. How much of these emissions are stored in the ocean vs. entering the atmosphere to cause warming and how the extra heat is distributed depends on atmosphere&ocean dynamics, which we must understand to know risks of both progressive Climate Change and Climate Variability which affect us all in many ways including extreme weather, floods, droughts, sea-level rise and ecosystem disruption. Citizens must be informed to make decisions such as "business as usual" vs. mitigating emissions to avert catastrophe. Simulations of Climate Change provide needed knowledge but in turn need reliable parameterizations of key physical processes, including ocean mixing, which greatly impacts transport&storage of heat and dissolved CO2. The turbulence group at NASA-GISS seeks to use physical theory to improve parameterizations of ocean mixing, including smallscale convective, shear driven, double diffusive, internal wave and tidal driven vertical mixing, as well as mixing by submesoscale eddies, and lateral mixing along isopycnals by mesoscale eddies. Medgar Evers undergraduates aid NASA research while learning climate science and developing computer&math skills. We write our own programs in MATLAB and FORTRAN to visualize and process output of ocean simulations including producing statistics to help judge impacts of different parameterizations on fidelity in reproducing realistic temperatures&salinities, diffusivities and turbulent power. The results can help upgrade the parameterizations. Students are introduced to complex system modeling and gain deeper appreciation of climate science and programming skills, while furthering climate science. We are incorporating climate projects into the Medgar Evers college curriculum. The PI is both a member of the turbulence group at

  16. Coupled Modeling of Hydrodynamics and Sound in Coastal Ocean for Renewable Ocean Energy Development

    Energy Technology Data Exchange (ETDEWEB)

    Long, Wen; Jung, Ki Won; Yang, Zhaoqing; Copping, Andrea; Deng, Z. Daniel

    2016-03-01

    An underwater sound model was developed to simulate sound propagation from marine and hydrokinetic energy (MHK) devices or offshore wind (OSW) energy platforms. Finite difference methods were developed to solve the 3D Helmholtz equation for sound propagation in the coastal environment. A 3D sparse matrix solver with complex coefficients was formed for solving the resulting acoustic pressure field. The Complex Shifted Laplacian Preconditioner (CSLP) method was applied to solve the matrix system iteratively with MPI parallelization using a high performance cluster. The sound model was then coupled with the Finite Volume Community Ocean Model (FVCOM) for simulating sound propagation generated by human activities, such as construction of OSW turbines or tidal stream turbine operations, in a range-dependent setting. As a proof of concept, initial validation of the solver is presented for two coastal wedge problems. This sound model can be useful for evaluating impacts on marine mammals due to deployment of MHK devices and OSW energy platforms.

  17. Aluminium in an ocean general circulation model compared with the West Atlantic Geotraces cruises

    NARCIS (Netherlands)

    van Hulten, M. M. P.; Sterl, A.; Tagliabue, A.; Dutay, J. -C.; Gehlen, M.; de Baar, H. J. W.; Middag, R.

    2013-01-01

    A model of aluminium has been developed and implemented in an Ocean General Circulation Model (NEMO-PISCES). In the model, aluminium enters the ocean by means of dust deposition. The internal oceanic processes are described by advection, mixing and reversible scavenging. The model has been evaluated

  18. Primary productivity

    Digital Repository Service at National Institute of Oceanography (India)

    Verlecar, X.N.; Parulekar, A.H.

    nutrients and ample solar radiation frequently trigger phytoplankton blooms in coastal polynias during Antarctic summer. Energy transfer model for primary productivity has been used to derive potential exploitable fishery resources in the Indian Ocean....

  19. Skill assessment of the PELAGOS global ocean biogeochemistry model over the period 1980–2000

    Directory of Open Access Journals (Sweden)

    M. Vichi

    2009-11-01

    Full Text Available Global Ocean Biogeochemistry General Circulation Models are useful tools to study biogeochemical processes at global and large scales under current climate and future scenario conditions. The credibility of future estimates is however dependent on the model skill in capturing the observed multi-annual variability of firstly the mean bulk biogeochemical properties, and secondly the rates at which organic matter is processed within the food web. For this double purpose, the results of a multi-annual simulation of the global ocean biogeochemical model PELAGOS have been objectively compared with multi-variate observations from the last 20 years of the 20th century, both considering bulk variables and carbon production/consumption rates. Simulated net primary production (NPP is comparable with satellite-derived estimates at the global scale and when compared with an independent data-set of in situ observations in the equatorial Pacific. The usage of objective skill indicators allowed us to demonstrate the importance of comparing like with like when considering carbon transformation processes. NPP scores improve substantially when in situ data are compared with modeled NPP which takes into account the excretion of freshly-produced dissolved organic carbon (DOC. It is thus recommended that DOC measurements be performed during in situ NPP measurements to quantify the actual production of organic carbon in the surface ocean. The chlorophyll bias in the Southern Ocean that affects this model as well as several others is linked to the inadequate representation of the mixed layer seasonal cycle in the region. A sensitivity experiment confirms that the artificial increase of mixed layer depths towards the observed values substantially reduces the bias. Our assessment results qualify the model for studies of carbon transformation in the surface ocean and metabolic balances. Within the limits of the model assumption and known biases, PELAGOS indicates a net

  20. Ocean-atmosphere coupled climate model development at SAWS: description and diagnosis

    CSIR Research Space (South Africa)

    Beraki, A

    2011-09-01

    Full Text Available This paper introduces the South African Weather Service's coupled ocean-atmosphere model. The paper also demonstrates the advances made in configuring an operational coupled ocean-atmosphere model in South Africa for seasonal forecast production...

  1. Slush Fund: Modeling the Multiphase Physics of Oceanic Ices

    Science.gov (United States)

    Buffo, J.; Schmidt, B. E.

    2016-12-01

    The prevalence of ice interacting with an ocean, both on Earth and throughout the solar system, and its crucial role as the mediator of exchange between the hydrosphere below and atmosphere above, have made quantifying the thermodynamic, chemical, and physical properties of the ice highly desirable. While direct observations of these quantities exist, their scarcity increases with the difficulty of obtainment; the basal surfaces of terrestrial ice shelves remain largely unexplored and the icy interiors of moons like Europa and Enceladus have never been directly observed. Our understanding of these entities thus relies on numerical simulation, and the efficacy of their incorporation into larger systems models is dependent on the accuracy of these initial simulations. One characteristic of seawater, likely shared by the oceans of icy moons, is that it is a solution. As such, when it is frozen a majority of the solute is rejected from the forming ice, concentrating in interstitial pockets and channels, producing a two-component reactive porous media known as a mushy layer. The multiphase nature of this layer affects the evolution and dynamics of the overlying ice mass. Additionally ice can form in the water column and accrete onto the basal surface of these ice masses via buoyancy driven sedimentation as frazil or platelet ice. Numerical models hoping to accurately represent ice-ocean interactions should include the multiphase behavior of these two phenomena. While models of sea ice have begun to incorporate multiphase physics into their capabilities, no models of ice shelves/shells explicitly account for the two-phase behavior of the ice-ocean interface. Here we present a 1D multiphase model of floating oceanic ice that includes parameterizations of both density driven advection within the `mushy layer' and buoyancy driven sedimentation. The model is validated against contemporary sea ice models and observational data. Environmental stresses such as supercooling and

  2. A Pacific Ocean general circulation model for satellite data assimilation

    Science.gov (United States)

    Chao, Y.; Halpern, D.; Mechoso, C. R.

    1991-01-01

    A tropical Pacific Ocean General Circulation Model (OGCM) to be used in satellite data assimilation studies is described. The transfer of the OGCM from a CYBER-205 at NOAA's Geophysical Fluid Dynamics Laboratory to a CRAY-2 at NASA's Ames Research Center is documented. Two 3-year model integrations from identical initial conditions but performed on those two computers are compared. The model simulations are very similar to each other, as expected, but the simulations performed with the higher-precision CRAY-2 is smoother than that with the lower-precision CYBER-205. The CYBER-205 and CRAY-2 use 32 and 64-bit mantissa arithmetic, respectively. The major features of the oceanic circulation in the tropical Pacific, namely the North Equatorial Current, the North Equatorial Countercurrent, the South Equatorial Current, and the Equatorial Undercurrent, are realistically produced and their seasonal cycles are described. The OGCM provides a powerful tool for study of tropical oceans and for the assimilation of satellite altimetry data.

  3. Ocean modelling for aquaculture and fisheries in Irish waters

    Science.gov (United States)

    Dabrowski, T.; Lyons, K.; Cusack, C.; Casal, G.; Berry, A.; Nolan, G. D.

    2016-01-01

    The Marine Institute, Ireland, runs a suite of operational regional and coastal ocean models. Recent developments include several tailored products that focus on the key needs of the Irish aquaculture sector. In this article, an overview of the products and services derived from the models are presented. The authors give an overview of a shellfish model developed in-house and that was designed to predict the growth, the physiological interactions with the ecosystem, and the level of coliform contamination of the blue mussel. As such, this model is applicable in studies on the carrying capacity of embayments, assessment of the impacts of pollution on aquaculture grounds, and the determination of shellfish water classes. Further services include the assimilation of the model-predicted shelf water movement into a new harmful algal bloom alert system used to inform end users of potential toxic shellfish events and high biomass blooms that include fish-killing species. Models are also used to identify potential sites for offshore aquaculture, to inform studies of potential cross-contamination in farms from the dispersal of planktonic sea lice larvae and other pathogens that can infect finfish, and to provide modelled products that underpin the assessment and advisory services on the sustainable exploitation of the resources of marine fisheries. This paper demonstrates that ocean models can provide an invaluable contribution to the sustainable blue growth of aquaculture and fisheries.

  4. A reduction in marine primary productivity driven by rapid warming over the tropical Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Roxy, M.K.; Modi, A.; Murtugudde, R.; Valsala, V.; Panickal, S.; PrasannaKumar, S.; Ravichandran, M.; Vichi, M.; Levy, M.

    Among the tropical oceans, the western Indian Ocean hosts one of the largest concentrations of marine phytoplankton blooms in summer. Interestingly, this is also the region with the largest warming trend in sea surface temperatures in the tropics...

  5. The role of passive ocean spectral fluorescence measurements in satellite determinations of marine primary production

    Science.gov (United States)

    Topliss, B. J.; Platt, Trevor C.

    The detection of spectral fluorescence is a rapidly-growing tool for marine biologists interested in both phytoplankton biomass and species composition. The presence of solar stimulated fluorescence at 685 nm (associated with chlorophyll a) has been detected in data sets collected from areas as diverse as the high Arctic and the Caribbean Sea. Interpretation and modelling of passive fluorescence signals in terms of optical efficiencies is dependent on accurate estimates of specific absorption coefficients. This in turn requires an optical modelling of the associated water mass in a similar manner to that used in interpretation of remote sensing signals (such as from the CZCS - Coastal Zone Colour Scanner, or the planned OCI - Ocean Colour Imager). A potential relationship between passive chlorophyll fluorescence efficiency and photosynthetic efficiency of chlorophyll a is outlined for the field data and the relevance of such a relationship to future remote sensing signals such as from the FLI (Fluorescence Line Imager) is discussed.

  6. Using Stable Isotopes to Assess Connectivity: the Importance of Oceanic and Watershed Nitrogen Sources for Estuarine Primary Producers

    Science.gov (United States)

    Estuaries located at the interface of terrestrial and oceanic ecosystems receive nutrients from both ecosystems. Stable isotopes of primary producers and consumers are often used as an indicator of nutrient sources. We assembled natural abundance nitrogen stable isotope (δ15N) d...

  7. Adapting to life: Ecosystem and ocean modelling using dynamic adaptive remeshing

    Science.gov (United States)

    Hill, J.; Popova, E.; Piggott, M. D.; Ham, D.; Srokosz, M. A.

    2011-12-01

    Primary production in the world ocean is significantly controlled by meso- and sub-mesocale process. Thus existing general circulation models applied at the basin and global scale are limited by two opposing requirements: to have high enough spatial resolution to resolve fully the processes involved (down to order 1km) and the need to realistically simulate the basin scale. No model can currently satisfy both of these constraints. Adaptive unstructured mesh techniques offer a fundamental advantage over standard fixed structured mesh models by automatically generating very high resolution at locations only where and when it is required. Mesh adaptivity automatically resolves fine-scale physical or biological features as they develop, optimising computational cost by reducing resolution where it is not required. Here, we describe Fluidity-ICOM, a non-hydrostatic, finite-element, unstructured mesh ocean model, into which we have embedded a six-component ecosystem model, that has been validated at a number of ocean locations. We demonstrate the benefits of adaptive unstructured mesh techniques for coupled physical and biological modelling by examining a convective example where a chimney of cold water is allowed to restratify. The restratification leads to changes in the mixed layer depth, pumping nutrients from depth, affecting the dynamics and spatial distribution of the ecosystem components. We examine the effects of a number of factors, including wind stress and temperature fluxes, on the ecosystem during the restratification. Comparing results between the fixed and adaptive mesh simulations shows the importance of sub-mesoscale processes in determining the biological response, and stresses the need for high-resolution in coupled biology-physics ocean models.

  8. Adaptive unstructured meshes for finite element ocean modelling

    Science.gov (United States)

    Power, P. W.; Pain, C. C.; Piggott, M. D.; Marshall, D. P.; Fang, F.; Umpleby, A. P.; de Oliveira, C. R. E.; Goddard, A. J. H.

    2003-04-01

    Flow in the world's oceans occurs at a wide range of spatial scales, from micro-metres to mega-metres. In particular, regions of intense flow are often highly localised, for example Western Boundary Currents. Conventional numerical ocean models generally use static meshes. The Imperial College Ocean Model (ICOM) uses advanced finite element methods to evolve the mesh to follow regions of intense flow, where high resolution may be required. Coarser resolution can be used in other areas of the flow domain. Evolution of the unstructured mesh is achieved by the use of a variety of error norms which control a self-adaptive anisotrophic meshing algorithm. The objective of this work is a reduction in computational cost, ensuring areas of fine resolution are used only where and when they are required. In this work we present some examples of an error measure being used to obtain high-quality solutions to a set of benchmark problems, for example flow over a seamount and a wind driven gyre, while using a minimal number of elements. The long term objective of this work is to define a rigorous self-adaptive technique for use in an Oceanographic context, and we present plans for the implimentation of a sensitivity based error measure.

  9. Modeling ocean wave propagation under sea ice covers

    Science.gov (United States)

    Zhao, Xin; Shen, Hayley H.; Cheng, Sukun

    2015-02-01

    Operational ocean wave models need to work globally, yet current ocean wave models can only treat ice-covered regions crudely. The purpose of this paper is to provide a brief overview of ice effects on wave propagation and different research methodology used in studying these effects. Based on its proximity to land or sea, sea ice can be classified as: landfast ice zone, shear zone, and the marginal ice zone. All ice covers attenuate wave energy. Only long swells can penetrate deep into an ice cover. Being closest to open water, wave propagation in the marginal ice zone is the most complex to model. The physical appearance of sea ice in the marginal ice zone varies. Grease ice, pancake ice, brash ice, floe aggregates, and continuous ice sheet may be found in this zone at different times and locations. These types of ice are formed under different thermal-mechanical forcing. There are three classic models that describe wave propagation through an idealized ice cover: mass loading, thin elastic plate, and viscous layer models. From physical arguments we may conjecture that mass loading model is suitable for disjoint aggregates of ice floes much smaller than the wavelength, thin elastic plate model is suitable for a continuous ice sheet, and the viscous layer model is suitable for grease ice. For different sea ice types we may need different wave ice interaction models. A recently proposed viscoelastic model is able to synthesize all three classic models into one. Under suitable limiting conditions it converges to the three previous models. The complete theoretical framework for evaluating wave propagation through various ice covers need to be implemented in the operational ocean wave models. In this review, we introduce the sea ice types, previous wave ice interaction models, wave attenuation mechanisms, the methods to calculate wave reflection and transmission between different ice covers, and the effect of ice floe breaking on shaping the sea ice morphology

  10. Log-Normal Turbulence Dissipation in Global Ocean Models

    Science.gov (United States)

    Pearson, Brodie; Fox-Kemper, Baylor

    2018-03-01

    Data from turbulent numerical simulations of the global ocean demonstrate that the dissipation of kinetic energy obeys a nearly log-normal distribution even at large horizontal scales O (10 km ) . As the horizontal scales of resolved turbulence are larger than the ocean is deep, the Kolmogorov-Yaglom theory for intermittency in 3D homogeneous, isotropic turbulence cannot apply; instead, the down-scale potential enstrophy cascade of quasigeostrophic turbulence should. Yet, energy dissipation obeys approximate log-normality—robustly across depths, seasons, regions, and subgrid schemes. The distribution parameters, skewness and kurtosis, show small systematic departures from log-normality with depth and subgrid friction schemes. Log-normality suggests that a few high-dissipation locations dominate the integrated energy and enstrophy budgets, which should be taken into account when making inferences from simplified models and inferring global energy budgets from sparse observations.

  11. Multi-scale Modelling of the Ocean Beneath Ice Shelves

    Science.gov (United States)

    Candy, A. S.; Kimura, S.; Holland, P.; Kramer, S. C.; Piggott, M. D.; Jenkins, A.; Pain, C. C.

    2011-12-01

    Quantitative prediction of future sea-level is currently limited because we lack an understanding of how the mass balance of the Earth's great ice sheets respond to and influence the climate. Understanding the behaviour of the ocean beneath an ice shelf and its interaction with the sheet above presents a great scientific challenge. A solid ice cover, in many places kilometres thick, bars access to the water column, so that observational data can only be obtained by drilling holes through, or launching autonomous vehicles beneath, the ice. In the absence of a comprehensive observational database, numerical modelling can be a key tool to advancing our understanding of the sub-ice-shelf regime. While we have a reasonable understanding of the overall ocean circulation and basic sensitivities, there remain critical processes that are difficult or impossible to represent in current operational models. Resolving these features adequately within a domain that includes the entire ice shelf and continental shelf to the north can be difficult with a structured horizontal resolution. It is currently impossible to adequately represent the key grounding line region, where the water column thickness reduces to zero, with a structured vertical grid. In addition, fronts and pycnoclines, the ice front geometry, shelf basal irregularities and modelling surface pressure all prove difficult in current approaches. The Fluidity-ICOM model (Piggott et al. 2008, doi:10.1002/fld.1663) simulates non-hydrostatic dynamics on meshes that can be unstructured in all three dimensions and uses anisotropic adaptive resolution which optimises the mesh and calculation in response to evolving solution dynamics. These features give it the flexibility required to tackle the challenges outlined above and the opportunity to develop a model that can improve understanding of the physical processes occurring under ice shelves. The approaches taken to develop a multi-scale model of ice shelf ocean cavity

  12. Challenges and potential solutions for European coastal ocean modelling

    Science.gov (United States)

    She, Jun; Stanev, Emil

    2017-04-01

    Coastal operational oceanography is a science and technological platform to integrate and transform the outcomes in marine monitoring, new knowledge generation and innovative technologies into operational information products and services in the coastal ocean. It has been identified as one of the four research priorities by EuroGOOS (She et al. 2016). Coastal modelling plays a central role in such an integration and transformation. A next generation coastal ocean forecasting system should have following features: i) being able to fully exploit benefits from future observations, ii) generate meaningful products in finer scales e.g., sub-mesoscale and in estuary-coast-sea continuum, iii) efficient parallel computing and model grid structure, iv) provide high quality forecasts as forcing to NWP and coastal climate models, v) resolving correctly inter-basin and inter-sub-basin water exchange, vi) resolving synoptic variability and predictability in marine ecosystems, e.g., for algae bloom, vi) being able to address critical and relevant issues in coastal applications, e.g., marine spatial planning, maritime safety, marine pollution protection, disaster prevention, offshore wind energy, climate change adaptation and mitigation, ICZM (integrated coastal zone management), the WFD (Water Framework Directive), and the MSFD (Marine Strategy Framework Directive), especially on habitat, eutrophication, and hydrographic condition descriptors. This presentation will address above challenges, identify limits of current models and propose correspondent research needed. The proposed roadmap will address an integrated monitoring-modelling approach and developing Unified European Coastal Ocean Models. In the coming years, a few new developments in European Sea observations can expected, e.g., more near real time delivering on profile observations made by research vessels, more shallow water Argo floats and bio-Argo floats deployed, much more high resolution sea level data from SWOT

  13. Contribution of riverine nutrients to the silicon biogeochemistry of the global ocean – a model study

    Directory of Open Access Journals (Sweden)

    C. Y. Bernard

    2011-03-01

    Full Text Available Continental shelf seas are known to support a large fraction of the global primary production. Yet, they are mostly ignored or neglected in global biogeochemical models. A number of processes that control the transfer of dissolved nutrients from rivers to the open ocean remain poorly understood. This applies in particular to dissolved silica which drives the growth of diatoms that form a large part of the phytoplankton biomass and are thus an important contributor to export production of carbon.

    Here, the representation of the biogeochemical cycling along continents is improved by coupling a high resolution database of riverine fluxes of nutrients to the global biogeochemical ocean general circulation model HAMOCC5-OM. Focusing on silicon (Si, but including the whole suite of nutrients – carbon (C, nitrogen (N and phosphorus (P in various forms – inputs are implemented in the model at coastal coupling points using the COSCAT global database of 156 mega-river-ensemble catchments from Meybeck et al. (2006. The catchments connect to the ocean through coastal segments according to three sets of criteria: natural limits, continental shelf topography, and geophysical dynamics.

    According to the model the largest effects on nutrient concentrations occur in hot spots such as the Amazon plume, the Arctic – with high nutrient inputs in relation to its total volume, and areas that encounter the largest increase in human activity, e.g., Southern Asia.

  14. Carbon dioxide, climate and the deep ocean circulation: Carbon chemistry model

    International Nuclear Information System (INIS)

    Menawat, A.S.

    1992-01-01

    The objective of this study was to investigate the role of oceanic carbon chemistry in modulating the atmospheric levels of CO 2 . It is well known that the oceans are the primary sink of the excess carbon pumped into the atmosphere since the beginning of the industrial period. The suspended particulate and the dissolved organic matters in the deep ocean play important roles as carriers of carbon and other elements critical to the fate of CO 2 . In addition, the suspended particulate matter provides sites for oxidation-reduction reactions and microbial activities. The problem is of an intricate system with complex chemical, physical and biological processes. This report describes a methodology to describe the interconversions of different forms of the organic and inorganic nutrients, that may be incorporated in the ocean circulation models. Our approach includes the driving force behind the transfers in addition to balancing the elements. Such thermodynamic considerations of describing the imbalance in the chemical potentials is a new and unique feature of our approach

  15. Failed oceanic transform models: experience of shaking the tree

    Science.gov (United States)

    Gerya, Taras

    2017-04-01

    In geodynamics, numerical modeling is often used as a trial-and-error tool, which does not necessarily requires full understanding or even a correct concept for a modeled phenomenon. Paradoxically, in order to understand an enigmatic process one should simply try to model it based on some initial assumptions, which must not even be correct… The reason is that our intuition is not always well "calibrated" for understanding of geodynamic phenomena, which develop on space- and timescales that are very different from our everyday experience. We often have much better ideas about physical laws governing geodynamic processes than on how these laws should interact on geological space- and timescales. From this prospective, numerical models, in which these physical laws are self-consistently implemented, can gradually calibrate our intuition by exploring what scenarios are physically sensible and what are not. I personally went through this painful learning path many times and one noteworthy example was my 3D numerical modeling of oceanic transform faults. As I understand in retrospective, my initial literature-inspired concept of how and why transform faults form and evolve was thermomechanically inconsistent and based on two main assumptions (btw. both were incorrect!): (1) oceanic transforms are directly inherited from the continental rifting and breakup stages and (2) they represent plate fragmentation structures having peculiar extension-parallel orientation due to the stress rotation caused by thermal contraction of the oceanic lithosphere. During one year (!) of high-resolution thermomechanical numerical experiments exploring various physics (including very computationally demanding thermal contraction) I systematically observed how my initially prescribed extension-parallel weak transform faults connecting ridge segments rotated away from their original orientation and get converted into oblique ridge sections… This was really an epic failure! However, at the

  16. Atmospheric and Oceanic Response to Southern Ocean Deep Convection Oscillations on Decadal to Centennial Time Scales in Climate Models

    Science.gov (United States)

    Martin, T.; Reintges, A.; Park, W.; Latif, M.

    2014-12-01

    Many current coupled global climate models simulate open ocean deep convection in the Southern Ocean as a recurring event with time scales ranging from a few years to centennial (de Lavergne et al., 2014, Nat. Clim. Ch.). The only observation of such event, however, was the occurrence of the Weddell Polynya in the mid-1970s, an open water area of 350 000 km2 within the Antarctic sea ice in three consecutive winters. Both the wide range of modeled frequency of occurrence and the absence of deep convection in the Weddell Sea highlights the lack of understanding concerning the phenomenon. Nevertheless, simulations indicate that atmospheric and oceanic responses to the cessation of deep convection in the Southern Ocean include a strengthening of the low-level atmospheric circulation over the Southern Ocean (increasing SAM index) and a reduction in the export of Antarctic Bottom Water (AABW), potentially masking the regional effects of global warming (Latif et al., 2013, J. Clim.; Martin et al., 2014, Deep Sea Res. II). It is thus of great importance to enhance our understanding of Southern Ocean deep convection and clarify the associated time scales. In two multi-millennial simulations with the Kiel Climate Model (KCM, ECHAM5 T31 atmosphere & NEMO-LIM2 ~2˚ ocean) we showed that the deep convection is driven by strong oceanic warming at mid-depth periodically overriding the stabilizing effects of precipitation and ice melt (Martin et al., 2013, Clim. Dyn.). Sea ice thickness also affects location and duration of the deep convection. A new control simulation, in which, amongst others, the atmosphere grid resolution is changed to T42 (~2.8˚), yields a faster deep convection flip-flop with a period of 80-100 years and a weaker but still significant global climate response similar to CMIP5 simulations. While model physics seem to affect the time scale and intensity of the phenomenon, the driving mechanism is a rather robust feature. Finally, we compare the atmospheric and

  17. The oceanic response to carbon emissions over the next century: investigation using three ocean carbon cycle models

    International Nuclear Information System (INIS)

    Chuck, A.; Tyrrell, T.; Holligan, P.M.; Totterdell, I.J.

    2005-01-01

    A recent study of coupled atmospheric carbon dioxide and the biosphere found alarming sensitivity of next-century atmospheric pCO 2 (and hence planetary temperature) to uncertainties in terrestrial processes. Here we investigate whether there is similar sensitivity associated with uncertainties in the behaviour of the ocean carbon cycle. We investigate this important question using three models of the ocean carbon cycle of varying complexity: (1) a new three-box oceanic carbon cycle model; (2) the HILDA multibox model with high vertical resolution at low latitudes; (3) the Hadley Centre ocean general circulation model (HadOCC). These models were used in combination to assess the quantitative significance (to year 2100 pCO 2 ) of potential changes to the ocean stimulated by global warming and other anthropogenic activities over the period 2000-2100. It was found that an increase in sea surface temperature and a decrease in the mixing rate due to stratification give rise to the greatest relative changes in pCO 2 , both being positive feedbacks. We failed to find any comparable large sensitivity due to the ocean

  18. An efficient and accurate representation of complex oceanic and biospheric models of anthropogenic carbon uptake

    Science.gov (United States)

    Joos, Fortunat; Bruno, Michele; Fink, Roger; Siegenthaler, Ulrich; Stocker, Thomas F.; Le Quéré, Corinne; Sarmiento, Jorge L.

    1996-07-01

    Establishing the link between atmospheric CO2 concentration and anthropogenic carbon emissions requires the development of complex carbon cycle models of the primary sinks, the ocean and terrestrial biosphere. Once such models have been developed, the potential exists to use pulse response functions to characterize their behaviour. However, the application of response functions based on a pulse increase in atmospheric CO2 to characterize oceanic uptake, the conventional technique, does not yield a very accurate result due to nonlinearities in the aquatic carbon chemistry. Here, we propose the use of an ocean mixed-layer pulse response function that characterizes the surface to deep ocean mixing in combination with a separate equation describing air-sea exchange. The use of a mixed-layer pulse response function avoids the problem arising from the nonlinearities of the carbon chemistry and gives therefore more accurate results. The response function is also valid for tracers other than carbon. We found that tracer uptake of the HILDA and Box-Diffusion model can be represented exactly by the new method. For the Princeton 3-D model, we find that the agreement between the complete model and its pulse substitute is better than 4% for the cumulative uptake of anthropogenic carbon for the period 1765 2300 applying the IPCC stabilization scenarios S450 and S750 and better than 2% for the simulated inventory and surface concentration of bomb-produced radiocarbon. By contrast, the use of atmospheric response functions gives deviations up to 73% for the cumulative CO2 uptake as calculated with the Princeton 3-D model. We introduce the use of a decay response function for calculating the potential carbon storage on land as a substitute for terrestrial biosphere models that describe the overturning of assimilated carbon. This, in combination with an equation describing the net primary productivity permits us to exactly characterize simple biosphere models. As the time scales of

  19. Accuracy assessment of global barotropic ocean tide models

    DEFF Research Database (Denmark)

    Stammer, D.; Ray, R. D.; Andersen, Ole Baltazar

    2014-01-01

    The accuracy of state-of-the-art global barotropic tide models is assessed using bottom pressure data, coastal tide gauges, satellite altimetry, various geodetic data on Antarctic ice shelves, and independent tracked satellite orbit perturbations. Tide models under review include empirical, purely......-water regions and also in the deep ocean. The root-sum-square differences between tide observations and the best models for eight major constituents are approximately 0.9, 5.0, and 6.5 cm for pelagic, shelf, and coastal conditions, respectively. Large intermodel discrepancies occur in high latitudes......, but testing in those regions is impeded by the paucity of high-quality in situ tide records. Long-wavelength components of models tested by analyzing satellite laser ranging measurements suggest that several models are comparably accurate for use in precise orbit determination, but analyses of GRACE...

  20. Modelling of bio-optical parameters of open ocean waters

    Directory of Open Access Journals (Sweden)

    Vadim N. Pelevin

    2001-12-01

    Full Text Available An original method for estimating the concentration of chlorophyll pigments, absorption of yellow substance and absorption of suspended matter without pigments and yellow substance in detritus using spectral diffuse attenuation coefficient for downwelling irradiance and irradiance reflectance data has been applied to sea waters of different types in the open ocean (case 1. Using the effective numerical single parameter classification with the water type optical index m as a parameter over the whole range of the open ocean waters, the calculations have been carried out and the light absorption spectra of sea waters tabulated. These spectra are used to optimize the absorption models and thus to estimate the concentrations of the main admixtures in sea water. The value of m can be determined from direct measurements of the downward irradiance attenuation coefficient at 500 nm or calculated from remote sensing data using the regressions given in the article. The sea water composition can then be readily estimated from the tables given for any open ocean area if that one parameter m characterizing the basin is known.

  1. Multi-satellite ocean tide modelling - the K-1 constituent

    DEFF Research Database (Denmark)

    Andersen, Ole Baltazar; Knudsen, Per

    1997-01-01

    All major ocean tide constituents are aliased into signals with periods less than 90 days from TOPEX/POSEIDON altimetry, except the K-1 constituent. The aliased K-1 has a period of 173 days. Consequently, it might be confounded with height variations caused by the semiannual cycle having a period......, where the presence of crossing tracks cannot separate K-1 from the semiannual signal from TOPEX/POSEIDON, the importance of including ERS-1 and GEOSAT observations was demonstrated. A comparison with 29 pelagic and coastal tide gauges in the Southern Ocean south of 50 degrees S gave 5.59 (M-2), 2.27 (S......-2) and 5.04 (K-1) cm RMS agreement for FES95.1 ocean tide model. The same comparison for the best empirical estimated constituents based on TOPEX/POSEIDON + ERS-1 + GEOSAT gave 4.32, 2.21, and 4.29 cm for M-2, S-2 and K-1, respectively....

  2. Changes in the Arctic Ocean CO2 sink (1996-2007): A regional model analysis

    Science.gov (United States)

    Manizza, M.; Follows, M. J.; Dutkiewicz, S.; Menemenlis, D.; Hill, C. N.; Key, R. M.

    2013-12-01

    The rapid recent decline of Arctic Ocean sea ice area increases the flux of solar radiation available for primary production and the area of open water for air-sea gas exchange. We use a regional physical-biogeochemical model of the Arctic Ocean, forced by the National Centers for Environmental Prediction/National Center for Atmospheric Research atmospheric reanalysis, to evaluate the mean present-day CO2 sink and its temporal evolution. During the 1996-2007 period, the model suggests that the Arctic average sea surface temperature warmed by 0.04°C a-1, that sea ice area decreased by ˜0.1 × 106 km2 a-1, and that the biological drawdown of dissolved inorganic carbon increased. The simulated 1996-2007 time-mean Arctic Ocean CO2 sink is 58 ± 6 Tg C a-1. The increase in ice-free ocean area and consequent carbon drawdown during this period enhances the CO2 sink by ˜1.4 Tg C a-1, consistent with estimates based on extrapolations of sparse data. A regional analysis suggests that during the 1996-2007 period, the shelf regions of the Laptev, East Siberian, Chukchi, and Beaufort Seas experienced an increase in the efficiency of their biological pump due to decreased sea ice area, especially during the 2004-2007 period, consistent with independently published estimates of primary production. In contrast, the CO2 sink in the Barents Sea is reduced during the 2004-2007 period due to a dominant control by warming and decreasing solubility. Thus, the effect of decreasing sea ice area and increasing sea surface temperature partially cancel, though the former is dominant.

  3. Operational ocean models in the Adriatic Sea: a skill assessment

    Directory of Open Access Journals (Sweden)

    J. Chiggiato

    2008-02-01

    Full Text Available In the framework of the Mediterranean Forecasting System (MFS project, the performance of regional numerical ocean forecasting systems is assessed by means of model-model and model-data comparison. Three different operational systems considered in this study are: the Adriatic REGional Model (AREG; the Adriatic Regional Ocean Modelling System (AdriaROMS and the Mediterranean Forecasting System General Circulation Model (MFS-GCM. AREG and AdriaROMS are regional implementations (with some dedicated variations of POM and ROMS, respectively, while MFS-GCM is an OPA based system. The assessment is done through standard scores. In situ and remote sensing data are used to evaluate the system performance. In particular, a set of CTD measurements collected in the whole western Adriatic during January 2006 and one year of satellite derived sea surface temperature measurements (SST allow to asses a full three-dimensional picture of the operational forecasting systems quality during January 2006 and to draw some preliminary considerations on the temporal fluctuation of scores estimated on surface quantities between summer 2005 and summer 2006.

    The regional systems share a negative bias in simulated temperature and salinity. Nonetheless, they outperform the MFS-GCM in the shallowest locations. Results on amplitude and phase errors are improved in areas shallower than 50 m, while degraded in deeper locations, where major models deficiencies are related to vertical mixing overestimation. In a basin-wide overview, the two regional models show differences in the local displacement of errors. In addition, in locations where the regional models are mutually correlated, the aggregated mean squared error was found to be smaller, that is a useful outcome of having several operational systems in the same region.

  4. Effect Of Oceanic Lithosphere Age Errors On Model Discrimination

    Science.gov (United States)

    DeLaughter, J. E.

    2016-12-01

    The thermal structure of the oceanic lithosphere is the subject of a long-standing controversy. Because the thermal structure varies with age, it governs properties such as heat flow, density, and bathymetry with important implications for plate tectonics. Though bathymetry, geoid, and heat flow for young (appears to be shallower than expected for older lithosphere indicating a plate model is a better fit. It is therefore useful to jointly fit bathymetry, geoid, and heat flow data to an inverse model to determine lithospheric structure details. Though inverse models usually include the effect of errors in bathymetry, heat flow, and geoid, they rarely examine the effects of errors in age. This may have the effect of introducing subtle biases into inverse models of the oceanic lithosphere. Because the inverse problem for thermal structure is both ill-posed and ill-conditioned, these overlooked errors may have a greater effect than expected. The problem is further complicated by the non-uniform distribution of age and errors in age estimates; for example, only 30% of the oceanic lithosphere is older than 80 MY and less than 3% is older than 150 MY. To determine the potential strength of such biases, I have used the age and error maps of Mueller et al (2008) to forward model the bathymetry for half space and GDH1 plate models. For ages less than 20 MY, both models give similar results. The errors induced by uncertainty in age are relatively large and suggest that when possible young lithosphere should be excluded when examining the lithospheric thermal model. As expected, GDH1 bathymetry converges asymptotically on the theoretical result for error-free data for older data. The resulting uncertainty is nearly as large as that introduced by errors in the other parameters; in the absence of other errors, the models can only be distinguished for ages greater than 80 MY. These results suggest that the problem should be approached with the minimum possible number of

  5. Using the Regional Ocean Modelling System (ROMS to improve the sea surface temperature predictions of the MERCATOR Ocean System

    Directory of Open Access Journals (Sweden)

    Pedro Costa

    2012-09-01

    Full Text Available Global models are generally capable of reproducing the observed trends in the globally averaged sea surface temperature (SST. However, the global models do not perform as well on regional scales. Here, we present an ocean forecast system based on the Regional Ocean Modelling System (ROMS, the boundary conditions come from the MERCATOR ocean system for the North Atlantic (1/6° horizontal resolution. The system covers the region of the northwestern Iberian Peninsula with a horizontal resolution of 1/36°, forced with the Weather Research and Forecasting Model (WRF and the Soil Water Assessment Tool (SWAT. The ocean model results from the regional ocean model are validated using real-time SST and observations from the MeteoGalicia, INTECMAR and Puertos Del Estado real-time observational networks. The validation results reveal that over a one-year period the mean absolute error of the SST is less than 1°C, and several sources of measured data reveal that the errors decrease near the coast. This improvement is related to the inclusion of local forcing not present in the boundary condition model.

  6. Dispersion of tracers by the oceanic eddy field modelling programme

    International Nuclear Information System (INIS)

    Richards, K.J.

    1986-01-01

    A numerical model has been developed to study the dispersion of tracers by the oceanic eddy field. The study is designed to investigate the horizontal and vertical structure of the eddies and how this structure is influenced by the bottom topography. It is found that hills and valleys have a strong effect on the eddies above them. The flow close to the bottom has a tendency to be steered by the height contours. The surface and bottom flows become decorrelated and the vertical variation of the kinetic energy of the eddies is increased with higher topographic features. (author)

  7. The Fidelity of Ocean Models With Explicit Eddies (Chapter 17)

    Energy Technology Data Exchange (ETDEWEB)

    McClean, J; Jayne, S; Maltrud, M; Ivanova, D

    2007-08-01

    Current practices within the oceanographic community have been reviewed with regard to the use of metrics to assess the realism of the upper-ocean circulation, ventilation processes diagnosed by time-evolving mixed layer depth and mode water formation, and eddy heat fluxes in large-scale fine resolution ocean model simulations. We have striven to understand the fidelity of these simulations in the context of their potential use in future fine-resolution coupled climate system studies. A variety of methodologies are used to assess the veracity of the numerical simulations. Sea surface height variability and the location of western boundary current paths from altimetry have been used routinely as basic indicators of fine-resolution model performance. Drifters and floats have also been used to provide pseudo-Eulerian measures of the mean and variability of surface and sub-surface flows, while statistical comparisons of observed and simulated means have been carried out using James tests. Probability density functions have been used to assess the Gaussian nature of the observed and simulated flows. Length and time scales have been calculated in both Eulerian and Lagrangian frameworks from altimetry and drifters, respectively. Concise measures of multiple model performance have been obtained from Taylor diagrams. The time-evolution of the mixed layer depth at monitoring stations has been compared with simulated time series. Finally, eddy heat fluxes are compared to climatological inferences.

  8. A new high resolution tidal model in the arctic ocean

    DEFF Research Database (Denmark)

    Cancet, M.; Andersen, Ole Baltazar; Lyard, F.

    The Arctic Ocean is a challenging region for tidal modeling, because of its complex and not well-documented bathymetry, together combined with the intermittent presence of sea ice and the fact that the in situ tidal observations are rather scarce at such high latitudes. As a consequence......, the accuracy of the global tidal models decreases by several centimeters in the Polar Regions. In particular, it has a large impact on the quality of the satellite altimeter sea surface heights in these regions (ERS1/2, Envisat, CryoSat-2, SARAL/AltiKa and the future Sentinel-3 mission). Better knowledge...... of the tides improves the quality of the high latitudes altimeter sea surface heights and of all derived products, such as the altimetry-derived geostrophic currents, the mean sea surface and the mean dynamic topography. In addition, accurate tidal models are highly strategic information for ever...

  9. Bioavailability of organically bound Fe to model phytoplankton of the Southern Ocean

    Directory of Open Access Journals (Sweden)

    C. S. Hassler

    2009-10-01

    Full Text Available Iron (Fe is known to be mostly bound to organic ligands and to limit primary productivity in the Southern Ocean. It is thus important to investigate the bioavailability of organically bound Fe. In this study, we used four phytoplankton species of the Southern Ocean (Phaeocystis sp., Chaetoceros sp., Fragilariopsis kerguelensis and Thalassiosira antarctica Comber to measure the influence of various organic ligands on Fe solubility and bioavailability. Short-term uptake Fe:C ratios were inversely related to the surface area to volume ratios of the phytoplankton. The ratio of extracellular to intracellular Fe is used to discuss the relative importance of diffusive supply and uptake to control Fe bioavailability. The effect of excess organic ligands on Fe bioavailability cannot be solely explained by their effect on Fe solubility. For most strains studied, the bioavailability of Fe can be enhanced relative to inorganic Fe in the presence of porphyrin, catecholate siderophore and saccharides whereas it was decreased in presence of hydroxamate siderophore and organic amine. For Thalassiosira, iron bioavailability was not affected by the presence of porphyrin, catecholate siderophore and saccharides. The enhancement of Fe bioavailability in presence of saccharides is presented as the result from both the formation of bioavailable (or chemically labile organic form of Fe and the stabilisation of Fe within the dissolved phase. Given the ubiquitous presence of saccharides in the ocean, these compounds might represent an important factor to control the basal level of soluble and bioavailable Fe. Results show that the use of model phytoplankton is promising to improve mechanistic understanding of Fe bioavailability and primary productivity in HNLC regions of the ocean.

  10. Climatology of the HOPE-G global ocean general circulation model - Sea ice general circulation model

    Energy Technology Data Exchange (ETDEWEB)

    Legutke, S. [Deutsches Klimarechenzentrum (DKRZ), Hamburg (Germany); Maier-Reimer, E. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

    1999-12-01

    The HOPE-G global ocean general circulation model (OGCM) climatology, obtained in a long-term forced integration is described. HOPE-G is a primitive-equation z-level ocean model which contains a dynamic-thermodynamic sea-ice model. It is formulated on a 2.8 grid with increased resolution in low latitudes in order to better resolve equatorial dynamics. The vertical resolution is 20 layers. The purpose of the integration was both to investigate the models ability to reproduce the observed general circulation of the world ocean and to obtain an initial state for coupled atmosphere - ocean - sea-ice climate simulations. The model was driven with daily mean data of a 15-year integration of the atmosphere general circulation model ECHAM4, the atmospheric component in later coupled runs. Thereby, a maximum of the flux variability that is expected to appear in coupled simulations is included already in the ocean spin-up experiment described here. The model was run for more than 2000 years until a quasi-steady state was achieved. It reproduces the major current systems and the main features of the so-called conveyor belt circulation. The observed distribution of water masses is reproduced reasonably well, although with a saline bias in the intermediate water masses and a warm bias in the deep and bottom water of the Atlantic and Indian Oceans. The model underestimates the meridional transport of heat in the Atlantic Ocean. The simulated heat transport in the other basins, though, is in good agreement with observations. (orig.)

  11. The Middle Miocene climate as modelled in an atmosphere-ocean-biosphere model

    Science.gov (United States)

    Krapp, M.; Jungclaus, J. H.

    2011-11-01

    We present simulations with a coupled atmosphere-ocean-biosphere model for the Middle Miocene 15 million years ago. The model is insofar more consistent than previous models because it captures the essential interactions between ocean and atmosphere and between atmosphere and vegetation. The Middle Miocene topography, which alters both large-scale ocean and atmospheric circulations, causes a global warming of 0.7 K compared to present day. Higher than present-day CO2 levels of 480 and 720 ppm cause a global warming of 2.8 and 4.9 K. The associated water vapour feedback enhances the greenhouse effect which leads to a polar amplification of the warming. These results suggest that higher than present-day CO2 levels are necessary to drive the warm Middle Miocene climate, also because the dynamic vegetation model simulates a denser vegetation which is in line with fossil records. However, we do not find a flatter than present-day equator-to-pole temperature gradient as has been suggested by marine and terrestrial proxies. Instead, a compensation between atmospheric and ocean heat transport counteracts the flattening of the temperature gradient. The acclaimed role of the large-scale ocean circulation in redistributing heat cannot be supported by our results. Including full ocean dynamics, therefore, does not solve the problem of the flat temperature gradient during the Middle Miocene.

  12. Variability and Long-term Memory on an Aquaplanet with a Coupled Atmosphere-Ocean Model

    Science.gov (United States)

    Dahms, E.; Fraedrich, K.; Lunkeit, F.; Borth, H.

    2010-09-01

    Various aquaplanet experiments are conducted with the Planet Simulator atmospheric general circulation model (AGCM), which is coupled to the Hamburg Large Scale Geostrophic ocean circulation model (LSG-OGCM). The Planet Simulator is a spectral model of intermediate complexity (MIC). The LSG ocean model is designed for climate studies with large spatial and temporal scales. In an aquaplanet environment the entire surface of the earth is covered by one ocean. However, besides the conventional aquaplanet, set-ups with different configurations for the ocean basins are applied by idealized meridional boundaries. These oceanic barriers do not extend into the atmosphere. If meridional boundaries exist in the ocean, western boundary currents are able to form, which do not only alter the oceanic circulation but also have an influence on the atmosphere. Besides the mean state, the atmospheric variability and long-term memory in the climate system are analyzed, as are the potential mechanisms behind these processes.

  13. Ocean forecasting in terrain-following coordinates: Formulation and skill assessment of the Regional Ocean Modeling System

    Science.gov (United States)

    Haidvogel, D.B.; Arango, H.; Budgell, W.P.; Cornuelle, B.D.; Curchitser, E.; Di, Lorenzo E.; Fennel, K.; Geyer, W.R.; Hermann, A.J.; Lanerolle, L.; Levin, J.; McWilliams, J.C.; Miller, A.J.; Moore, A.M.; Powell, T.M.; Shchepetkin, A.F.; Sherwood, C.R.; Signell, R.P.; Warner, J.C.; Wilkin, J.

    2008-01-01

    Systematic improvements in algorithmic design of regional ocean circulation models have led to significant enhancement in simulation ability across a wide range of space/time scales and marine system types. As an example, we briefly review the Regional Ocean Modeling System, a member of a general class of three-dimensional, free-surface, terrain-following numerical models. Noteworthy characteristics of the ROMS computational kernel include: consistent temporal averaging of the barotropic mode to guarantee both exact conservation and constancy preservation properties for tracers; redefined barotropic pressure-gradient terms to account for local variations in the density field; vertical interpolation performed using conservative parabolic splines; and higher-order, quasi-monotone advection algorithms. Examples of quantitative skill assessment are shown for a tidally driven estuary, an ice-covered high-latitude sea, a wind- and buoyancy-forced continental shelf, and a mid-latitude ocean basin. The combination of moderate-order spatial approximations, enhanced conservation properties, and quasi-monotone advection produces both more robust and accurate, and less diffusive, solutions than those produced in earlier terrain-following ocean models. Together with advanced methods of data assimilation and novel observing system technologies, these capabilities constitute the necessary ingredients for multi-purpose regional ocean prediction systems. 

  14. Coupling atmospheric and ocean wave models for storm simulation

    DEFF Research Database (Denmark)

    Du, Jianting

    is found to have similar spatial patterns as the Advanced Synthetic Aperture Radar (ASAR) radar backscatter; both show features of the bathymetry. Analysis of the wind field from the non-coupled and WBLM coupled experiments show that the wind-wave coupling is important in strong wind conditions, varying......This thesis studies the wind-wave interactions through the coupling between the atmospheric model and ocean surface wave models. Special attention is put on storm simulations in the North Sea for wind energy applications in the coastal zones. The two aspects, namely storm conditions and coastal...... areas, are challenging for the wind-wave coupling system because: in storm cases, the wave field is constantly modified by the fast varying wind field; in coastal zones, the wave field is strongly influenced by the bathymetry and currents. Both conditions have complex, unsteady sea state varying...

  15. Oceanic circulation models help to predict global biogeography of pelagic yellow-bellied sea snake

    OpenAIRE

    Brischoux, François; Cotté, Cédric; Lillywhite, Harvey B.; Bailleul, Frédéric; Lalire, Maxime; Gaspar, Philippe

    2016-01-01

    It is well recognized that most marine vertebrates, and especially tetrapods, precisely orient and actively move in apparently homogeneous oceanic environments. Here, we investigate the presumptive role of oceanic currents in biogeographic patterns observed in a secondarily marine tetrapod, the yellow-bellied sea snake (Hydrophis [Pelamis] platurus). State-of-the-art world ocean circulation models show how H. platurus, the only pelagic species of sea snake, can potentially exploit oceanic cur...

  16. Carbon isotopes in the ocean model of the Community Earth System Model (CESM1)

    Science.gov (United States)

    Jahn, A.; Lindsay, K.; Giraud, X.; Gruber, N.; Otto-Bliesner, B. L.; Liu, Z.; Brady, E. C.

    2015-08-01

    Carbon isotopes in the ocean are frequently used as paleoclimate proxies and as present-day geochemical ocean tracers. In order to allow a more direct comparison of climate model results with this large and currently underutilized data set, we added a carbon isotope module to the ocean model of the Community Earth System Model (CESM), containing the cycling of the stable isotope 13C and the radioactive isotope 14C. We implemented the 14C tracer in two ways: in the "abiotic" case, the 14C tracer is only subject to air-sea gas exchange, physical transport, and radioactive decay, while in the "biotic" version, the 14C additionally follows the 13C tracer through all biogeochemical and ecological processes. Thus, the abiotic 14C tracer can be run without the ecosystem module, requiring significantly fewer computational resources. The carbon isotope module calculates the carbon isotopic fractionation during gas exchange, photosynthesis, and calcium carbonate formation, while any subsequent biological process such as remineralization as well as any external inputs are assumed to occur without fractionation. Given the uncertainty associated with the biological fractionation during photosynthesis, we implemented and tested three parameterizations of different complexity. Compared to present-day observations, the model is able to simulate the oceanic 14C bomb uptake and the 13C Suess effect reasonably well compared to observations and other model studies. At the same time, the carbon isotopes reveal biases in the physical model, for example, too sluggish ventilation of the deep Pacific Ocean.

  17. Carbon isotopes in the ocean model of the Community Earth System Model (CESM1

    Directory of Open Access Journals (Sweden)

    A. Jahn

    2015-08-01

    Full Text Available Carbon isotopes in the ocean are frequently used as paleoclimate proxies and as present-day geochemical ocean tracers. In order to allow a more direct comparison of climate model results with this large and currently underutilized data set, we added a carbon isotope module to the ocean model of the Community Earth System Model (CESM, containing the cycling of the stable isotope 13C and the radioactive isotope 14C. We implemented the 14C tracer in two ways: in the "abiotic" case, the 14C tracer is only subject to air–sea gas exchange, physical transport, and radioactive decay, while in the "biotic" version, the 14C additionally follows the 13C tracer through all biogeochemical and ecological processes. Thus, the abiotic 14C tracer can be run without the ecosystem module, requiring significantly fewer computational resources. The carbon isotope module calculates the carbon isotopic fractionation during gas exchange, photosynthesis, and calcium carbonate formation, while any subsequent biological process such as remineralization as well as any external inputs are assumed to occur without fractionation. Given the uncertainty associated with the biological fractionation during photosynthesis, we implemented and tested three parameterizations of different complexity. Compared to present-day observations, the model is able to simulate the oceanic 14C bomb uptake and the 13C Suess effect reasonably well compared to observations and other model studies. At the same time, the carbon isotopes reveal biases in the physical model, for example, too sluggish ventilation of the deep Pacific Ocean.

  18. Evaluation of hydrodynamic ocean models as a first step in larval dispersal modelling

    Science.gov (United States)

    Vasile, Roxana; Hartmann, Klaas; Hobday, Alistair J.; Oliver, Eric; Tracey, Sean

    2018-01-01

    Larval dispersal modelling, a powerful tool in studying population connectivity and species distribution, requires accurate estimates of the ocean state, on a high-resolution grid in both space (e.g. 0.5-1 km horizontal grid) and time (e.g. hourly outputs), particularly of current velocities and water temperature. These estimates are usually provided by hydrodynamic models based on which larval trajectories and survival are computed. In this study we assessed the accuracy of two hydrodynamic models around Australia - Bluelink ReANalysis (BRAN) and Hybrid Coordinate Ocean Model (HYCOM) - through comparison with empirical data from the Australian National Moorings Network (ANMN). We evaluated the models' predictions of seawater parameters most relevant to larval dispersal - temperature, u and v velocities and current speed and direction - on the continental shelf where spawning and nursery areas for major fishery species are located. The performance of each model in estimating ocean parameters was found to depend on the parameter investigated and to vary from one geographical region to another. Both BRAN and HYCOM models systematically overestimated the mean water temperature, particularly in the top 140 m of water column, with over 2 °C bias at some of the mooring stations. HYCOM model was more accurate than BRAN for water temperature predictions in the Great Australian Bight and along the east coast of Australia. Skill scores between each model and the in situ observations showed lower accuracy in the models' predictions of u and v ocean current velocities compared to water temperature predictions. For both models, the lowest accuracy in predicting ocean current velocities, speed and direction was observed at 200 m depth. Low accuracy of both model predictions was also observed in the top 10 m of the water column. BRAN had more accurate predictions of both u and v velocities in the upper 50 m of water column at all mooring station locations. While HYCOM

  19. Multimission empirical ocean tide modeling for shallow waters and polar seas

    Science.gov (United States)

    Cheng, Yongcun; Andersen, Ole Baltazar

    2011-11-01

    A new global ocean tide model named DTU10 (developed at Technical University of Denmark) representing all major diurnal and semidiurnal tidal constituents is proposed based on an empirical correction to the global tide model FES2004 (Finite Element Solutions), with residual tides determined using the response method. The improvements are achieved by introducing 4 years of TOPEX-Jason 1 interleaved mission into existing 18 years (1993-2010) of primary joint TOPEX, Jason 1, and Jason 2 mission time series. Hereby the spatial distribution of observations are doubled and satellite altimetry should be able to recover twice the spatial variations of the tidal signal which is particularly important in shallow waters where the spatial scale of the tidal signal is scaled down. Outside the ±66° parallel combined Envisat, GEOSAT Follow-On, and ERS-2, data sets have been included to solve for the tides up to the ±82° parallel. A new approach to removing the annual sea level variations prior to estimating the residual tides significantly improved tidal determination of diurnal constituents from the Sun-synchronous satellites (e.g., ERS-2 and Envisat) in the polar seas. Extensive evaluations with six tide gauge sets show that the new tide model fits the tide gauge measurements favorably to other state of the art global ocean tide models in both the deep and shallow waters, especially in the Arctic Ocean and the Southern Ocean. One example is a comparison with 207 tide gauge data in the East Asian marginal seas where the root-mean-square agreement improved by 35.12%, 22.61%, 27.07%, and 22.65% (M2, S2, K1, and O1) for the DTU10 tide model compared with the FES2004 tide model. A similar comparison in the Arctic Ocean with 151 gauge data improved by 9.93%, 0.34%, 7.46%, and 9.52% for the M2, S2, K1, and O1 constituents, respectively.

  20. Sea ice thermohaline dynamics and biogeochemistry in the Arctic Ocean: Empirical and model results

    Science.gov (United States)

    Duarte, Pedro; Meyer, Amelie; Olsen, Lasse M.; Kauko, Hanna M.; Assmy, Philipp; Rösel, Anja; Itkin, Polona; Hudson, Stephen R.; Granskog, Mats A.; Gerland, Sebastian; Sundfjord, Arild; Steen, Harald; Hop, Haakon; Cohen, Lana; Peterson, Algot K.; Jeffery, Nicole; Elliott, Scott M.; Hunke, Elizabeth C.; Turner, Adrian K.

    2017-07-01

    Large changes in the sea ice regime of the Arctic Ocean have occurred over the last decades justifying the development of models to forecast sea ice physics and biogeochemistry. The main goal of this study is to evaluate the performance of the Los Alamos Sea Ice Model (CICE) to simulate physical and biogeochemical properties at time scales of a few weeks and to use the model to analyze ice algal bloom dynamics in different types of ice. Ocean and atmospheric forcing data and observations of the evolution of the sea ice properties collected from 18 April to 4 June 2015, during the Norwegian young sea ICE expedition, were used to test the CICE model. Our results show the following: (i) model performance is reasonable for sea ice thickness and bulk salinity; good for vertically resolved temperature, vertically averaged Chl a concentrations, and standing stocks; and poor for vertically resolved Chl a concentrations. (ii) Improving current knowledge about nutrient exchanges, ice algal recruitment, and motion is critical to improve sea ice biogeochemical modeling. (iii) Ice algae may bloom despite some degree of basal melting. (iv) Ice algal motility driven by gradients in limiting factors is a plausible mechanism to explain their vertical distribution. (v) Different ice algal bloom and net primary production (NPP) patterns were identified in the ice types studied, suggesting that ice algal maximal growth rates will increase, while sea ice vertically integrated NPP and biomass will decrease as a result of the predictable increase in the area covered by refrozen leads in the Arctic Ocean.

  1. Tracer-based inferences of new and export primary productivity in the ocean

    Science.gov (United States)

    Jenkins, W. J.

    1995-07-01

    Obtaining regional estimates of seasonal to decadal average new productivity in the ocean is an important goal. Tracer studies have proven useful in making such determinations, although the nature of the estimates made are colored by the character and space/time scales of the tracer systems used. These differences provide important clues as to mechanisms and processes. Knowledge of new, export and particulate export fluxes are powerful constraints for biogeochemical models. We have made significant advances over the past four years, with different tracer systems yielding more or less consistent results in, for example, the subtropical North Atlantic. The general agreement between essentially independent approaches does much to build our confidence in the veracity of their results. Further, exciting new insights are provided by new information regarding the relative magnitude of particulate export flux. Some nagging concerns remain, however, both due to the mismatch between these measurements and other more traditional approaches (e.g., sediment traps), and some unresolved implications of some of the observations. With improved measurement techniques, more sophisticated interpretive tools, and the large field programs in progress, we have high hopes that the future will bring a clearer view.

  2. Uncertainty in Earth System Models: Benchmarks for Ocean Model Performance and Validation

    Science.gov (United States)

    Ogunro, O. O.; Elliott, S.; Collier, N.; Wingenter, O. W.; Deal, C.; Fu, W.; Hoffman, F. M.

    2017-12-01

    The mean ocean CO2 sink is a major component of the global carbon budget, with marine reservoirs holding about fifty times more carbon than the atmosphere. Phytoplankton play a significant role in the net carbon sink through photosynthesis and drawdown, such that about a quarter of anthropogenic CO2 emissions end up in the ocean. Biology greatly increases the efficiency of marine environments in CO2 uptake and ultimately reduces the impact of the persistent rise in atmospheric concentrations. However, a number of challenges remain in appropriate representation of marine biogeochemical processes in Earth System Models (ESM). These threaten to undermine the community effort to quantify seasonal to multidecadal variability in ocean uptake of atmospheric CO2. In a bid to improve analyses of marine contributions to climate-carbon cycle feedbacks, we have developed new analysis methods and biogeochemistry metrics as part of the International Ocean Model Benchmarking (IOMB) effort. Our intent is to meet the growing diagnostic and benchmarking needs of ocean biogeochemistry models. The resulting software package has been employed to validate DOE ocean biogeochemistry results by comparison with observational datasets. Several other international ocean models contributing results to the fifth phase of the Coupled Model Intercomparison Project (CMIP5) were analyzed simultaneously. Our comparisons suggest that the biogeochemical processes determining CO2 entry into the global ocean are not well represented in most ESMs. Polar regions continue to show notable biases in many critical biogeochemical and physical oceanographic variables. Some of these disparities could have first order impacts on the conversion of atmospheric CO2 to organic carbon. In addition, single forcing simulations show that the current ocean state can be partly explained by the uptake of anthropogenic emissions. Combined effects of two or more of these forcings on ocean biogeochemical cycles and ecosystems

  3. Simulating Freak Waves in the Ocean with CFD Modeling

    Science.gov (United States)

    Manolidis, M.; Orzech, M.; Simeonov, J.

    2017-12-01

    Rogue, or freak, waves constitute an active topic of research within the world scientific community, as various maritime authorities around the globe seek to better understand and more accurately assess the risks that the occurrence of such phenomena entail. Several experimental studies have shed some light on the mechanics of rogue wave formation. In our work we numerically simulate the formation of such waves in oceanic conditions by means of Computational Fluid Dynamics (CFD) software. For this purpose we implement the NHWAVE and OpenFOAM software packages. Both are non-hydrostatic, turbulent flow solvers, but NHWAVE implements a shock-capturing scheme at the free surface-interface, while OpenFOAM utilizes the Volume Of Fluid (VOF) method. NHWAVE has been shown to accurately reproduce highly nonlinear surface wave phenomena, such as soliton propagation and wave shoaling. We conducted a range of tests simulating rogue wave formation and horizontally varying currents to evaluate and compare the capabilities of the two software packages. Then we used each model to investigate the effect of ocean currents and current gradients on the formation of rogue waves. We present preliminary results.

  4. Adapting to life: simulating an ecosystem within an unstructured adaptive mesh ocean model

    Science.gov (United States)

    Hill, J.; Piggott, M. D.; Popova, E. E.; Ham, D. A.; Srokosz, M. A.

    2010-12-01

    Ocean oligotrophic gyres are characterised by low rates of primary production. Nevertheless their great area, covering roughly a third of the Earth's surface, and probably constituting the largest ecosystem on the planet means that they play a crucial role in global biogeochemistry. Current models give values of primary production two orders of magnitude lower than those observed, thought to be due to the non-resolution of sub-mesoscale phenomena, which play a significant role in nutrient supply in such areas. However, which aspects of sub-mesoscale processes are responsible for the observed higher productivity is an open question. Existing models are limited by two opposing requirements: to have high enough spatial resolution to resolve fully the processes involved (down to order 1km) and the need to realistically simulate the full gyre. No model can currently satisfy both of these constraints. Here, we detail Fluidity-ICOM, a non-hydrostatic, finite-element, unstructured mesh ocean model. Adaptive mesh techniques allow us to focus resolution where and when we require it. We present the first steps towards performing a full North Atlantic simulation, by showing that adaptive mesh techniques can be used in conjunction with both turbulent parametrisations and ecosystems models in psuedo-1D water columns. We show that the model can successfully reproduce the annual variation of the mixed layer depth at keys locations within the North Atlantic gyre, with adaptive meshing producing more accurate results than the fixed mesh simulations, with fewer degrees of freedom. Moreover, the model is capable of reproducing the key behaviour of the ecosystem in those locations.

  5. Ocean primary production and available light: Further algorithms for remote sensing

    Digital Repository Service at National Institute of Oceanography (India)

    Platt, T.; Sathyendranath, S.; Caverhill, C.M.; Lewis, M.R.

    In the context of remote sensing of the ocean, the general problem of estimating water column production from surface irradiance and column chlorophyll concentration is examined, and some refinements are made to the linear theory presented by PLATr...

  6. The National Ocean Sciences Bowl: An Effective Model for Engaging High School Students in Ocean Science

    Science.gov (United States)

    Holloway, A. E.

    2016-02-01

    The National Ocean Sciences Bowl (NOSB) is an informal high school education program that engages students in ocean and environmental science and exposes them to the breadth of ocean-related careers. The NOSB strives to train the next generation of interdisciplinary capable scientists and build a STEM-literate society that harnesses the power of ocean and climate science to address environmental, economic, and societal issues. Through the NOSB, students not only learn scientific principles, but also apply them to compelling real-world problems. The NOSB provides a richer STEM education and exposes students to ocean science topics they may not otherwise study through classroom curriculum. A longitudinal study that began in 2007 has shown that NOSB participants have an enhanced interest in ocean-related hobbies and environmental stewardship and an increasing number of these students have remained in the STEM pipeline and workforce.While the NOSB is primarily an academic competition, it has evolved since its creation in 1998 to include a variety of practical and professional development components. One of the program enhancements, the Scientific Expert Briefing (SEB), gives students the opportunity to apply what they have studied and think critically about current and ongoing ocean science challenges. The SEB helps students connect their knowledge of ocean science with current and proposed policy initiatives. Students gain significant research, writing, and presentation skills, while enhancing their ability for collaboration and consensus building, all vital workforce skills. Ultimately, the SEB teaches students how to communicate complex scientific research into digestible information for decision-makers and the general public.This poster will examine the impact of the NOSB and its role in strengthening the workforce pipeline through a combination of independent learning, competition, and opportunities for communication skills development.

  7. Modelling shelf-ocean exchange and its biogeochemical consequences in coastal upwelling systems

    DEFF Research Database (Denmark)

    Muchamad, Al Azhar

    margin bathymetry, and 3) what processes determine the observed variability of total organic carbon (TOC) content in shelf sediments underlying the upwelling system, with implications for the formation of petroleum source rocks. Here, a numerical ocean modeling approach is used in this thesis to explore...... processes and the development of anoxia/euxinia under the present day or past geological conditions. Thirdly and last, processes controlling distribution of total organic carbon (TOC) content in sediments across the continental margin is evaluated by application of the model to the Benguela upwelling system....... In the model, biological primary production and shelf bottom-water anoxia result in enhanced sedimentary TOC concentrations on the mid shelf and upper slope. The simulated TOCs implicate that bottom lateral transport only has a significant effect on increasing the deposition of the organic carbon on the mid...

  8. Representing grounding line migration in synchronous coupling between a marine ice sheet model and a z-coordinate ocean model

    Science.gov (United States)

    Goldberg, D. N.; Snow, K.; Holland, P.; Jordan, J. R.; Campin, J.-M.; Heimbach, P.; Arthern, R.; Jenkins, A.

    2018-05-01

    Synchronous coupling is developed between an ice sheet model and a z-coordinate ocean model (the MITgcm). A previously-developed scheme to allow continuous vertical movement of the ice-ocean interface of a floating ice shelf ("vertical coupling") is built upon to allow continuous movement of the grounding line, or point of floatation of the ice sheet ("horizontal coupling"). Horizontal coupling is implemented through the maintenance of a thin layer of ocean ( ∼ 1 m) under grounded ice, which is inflated into the real ocean as the ice ungrounds. This is accomplished through a modification of the ocean model's nonlinear free surface evolution in a manner akin to a hydrological model in the presence of steep bathymetry. The coupled model is applied to a number of idealized geometries and shown to successfully represent ocean-forced marine ice sheet retreat while maintaining a continuous ocean circulation.

  9. A regional ocean circulation model for the mid-Cretaceous North Atlantic Basin: implications for black shale formation

    Directory of Open Access Journals (Sweden)

    R. P. M. Topper

    2011-03-01

    Full Text Available High concentrations of organic matter accumulated in marine sediments during Oceanic Anoxic Events (OAEs in the Cretaceous. Model studies examining these events invariably make use of global ocean circulation models. In this study, a regional model for the North Atlantic Basin during OAE2 at the Cenomanian-Turonian boundary has been developed. A first order check of the results has been performed by comparison with the results of a recent global Cenomanian CCSM3 run, from which boundary and initial conditions were obtained. The regional model is able to maintain tracer patterns and to produce velocity patterns similar to the global model. The sensitivity of the basin tracer and circulation patterns to changes in the geometry of the connections with the global ocean is examined with three experiments with different bathymetries near the sponges. Different geometries turn out to have little effect on tracer distribution, but do affect circulation and upwelling patterns. The regional model is also used to test the hypothesis that ocean circulation may have been behind the deposition of black shales during OAEs. Three scenarios are tested which are thought to represent pre-OAE, OAE and post-OAE situations. Model results confirm that Pacific intermediate inflow together with coastal upwelling could have enhanced primary production during OAE2. A low sea level in the pre-OAE scenario could have inhibited large scale black shale formation, as could have the opening of the Equatorial Atlantic Seaway in the post-OAE scenario.

  10. Climate-induced interannual variability of marine primary and export production in three global coupled climate carbon cycle models

    Science.gov (United States)

    Schneider, B.; Bopp, L.; Gehlen, M.; Segschneider, J.; Frölicher, T. L.; Cadule, P.; Friedlingstein, P.; Doney, S. C.; Behrenfeld, M. J.; Joos, F.

    2008-04-01

    Fully coupled climate carbon cycle models are sophisticated tools that are used to predict future climate change and its impact on the land and ocean carbon cycles. These models should be able to adequately represent natural variability, requiring model validation by observations. The present study focuses on the ocean carbon cycle component, in particular the spatial and temporal variability in net primary productivity (PP) and export production (EP) of particulate organic carbon (POC). Results from three coupled climate carbon cycle models (IPSL, MPIM, NCAR) are compared with observation-based estimates derived from satellite measurements of ocean colour and results from inverse modelling (data assimilation). Satellite observations of ocean colour have shown that temporal variability of PP on the global scale is largely dominated by the permanently stratified, low-latitude ocean (Behrenfeld et al., 2006) with stronger stratification (higher sea surface temperature; SST) being associated with negative PP anomalies. Results from all three coupled models confirm the role of the low-latitude, permanently stratified ocean for anomalies in globally integrated PP, but only one model (IPSL) also reproduces the inverse relationship between stratification (SST) and PP. An adequate representation of iron and macronutrient co-limitation of phytoplankton growth in the tropical ocean has shown to be the crucial mechanism determining the capability of the models to reproduce observed interactions between climate and PP.

  11. Climate-induced interannual variability of marine primary and export production in three global coupled climate carbon cycle models

    Directory of Open Access Journals (Sweden)

    B. Schneider

    2008-04-01

    Full Text Available Fully coupled climate carbon cycle models are sophisticated tools that are used to predict future climate change and its impact on the land and ocean carbon cycles. These models should be able to adequately represent natural variability, requiring model validation by observations. The present study focuses on the ocean carbon cycle component, in particular the spatial and temporal variability in net primary productivity (PP and export production (EP of particulate organic carbon (POC. Results from three coupled climate carbon cycle models (IPSL, MPIM, NCAR are compared with observation-based estimates derived from satellite measurements of ocean colour and results from inverse modelling (data assimilation. Satellite observations of ocean colour have shown that temporal variability of PP on the global scale is largely dominated by the permanently stratified, low-latitude ocean (Behrenfeld et al., 2006 with stronger stratification (higher sea surface temperature; SST being associated with negative PP anomalies. Results from all three coupled models confirm the role of the low-latitude, permanently stratified ocean for anomalies in globally integrated PP, but only one model (IPSL also reproduces the inverse relationship between stratification (SST and PP. An adequate representation of iron and macronutrient co-limitation of phytoplankton growth in the tropical ocean has shown to be the crucial mechanism determining the capability of the models to reproduce observed interactions between climate and PP.

  12. Comparison between summertime and wintertime Arctic Ocean primary marine aerosol properties

    Directory of Open Access Journals (Sweden)

    J. Zábori

    2013-05-01

    Full Text Available Primary marine aerosols (PMAs are an important source of cloud condensation nuclei, and one of the key elements of the remote marine radiative budget. Changes occurring in the rapidly warming Arctic, most importantly the decreasing sea ice extent, will alter PMA production and hence the Arctic climate through a set of feedback processes. In light of this, laboratory experiments with Arctic Ocean water during both Arctic winter and summer were conducted and focused on PMA emissions as a function of season and water properties. Total particle number concentrations and particle number size distributions were used to characterize the PMA population. A comprehensive data set from the Arctic summer and winter showed a decrease in PMA concentrations for the covered water temperature (Tw range between −1°C and 15°C. A sharp decrease in PMA emissions for a Tw increase from −1°C to 4°C was followed by a lower rate of change in PMA emissions for Tw up to about 6°C. Near constant number concentrations for water temperatures between 6°C to 10°C and higher were recorded. Even though the total particle number concentration changes for overlapping Tw ranges were consistent between the summer and winter measurements, the distribution of particle number concentrations among the different sizes varied between the seasons. Median particle number concentrations for a dry diameter (DpDp > 0.125μm, the particle number concentrations during winter were mostly higher than in summer (up to 50%. The normalized particle number size distribution as a function of water temperature was examined for both winter and summer measurements. An increase in Tw from −1°C to 10°C during winter measurements showed a decrease in the peak of relative particle number concentration at about a Dp of 0.180μm, while an increase was observed for particles with Dp > 1μm. Summer measurements exhibited a relative shift to smaller particle sizes for an increase of Tw in the range

  13. Effects of whaling on the structure of the Southern Ocean food web: insights on the "krill surplus" from ecosystem modelling.

    Science.gov (United States)

    Surma, Szymon; Pakhomov, Evgeny A; Pitcher, Tony J

    2014-01-01

    The aim of this study was to examine the ecological plausibility of the "krill surplus" hypothesis and the effects of whaling on the Southern Ocean food web using mass-balance ecosystem modelling. The depletion trajectory and unexploited biomass of each rorqual population in the Antarctic was reconstructed using yearly catch records and a set of species-specific surplus production models. The resulting estimates of the unexploited biomass of Antarctic rorquals were used to construct an Ecopath model of the Southern Ocean food web existing in 1900. The rorqual depletion trajectory was then used in an Ecosim scenario to drive rorqual biomasses and examine the "krill surplus" phenomenon and whaling effects on the food web in the years 1900-2008. An additional suite of Ecosim scenarios reflecting several hypothetical trends in Southern Ocean primary productivity were employed to examine the effect of bottom-up forcing on the documented krill biomass trend. The output of the Ecosim scenarios indicated that while the "krill surplus" hypothesis is a plausible explanation of the biomass trends observed in some penguin and pinniped species in the mid-20th century, the excess krill biomass was most likely eliminated by a rapid decline in primary productivity in the years 1975-1995. Our findings suggest that changes in physical conditions in the Southern Ocean during this time period could have eliminated the ecological effects of rorqual depletion, although the mechanism responsible is currently unknown. Furthermore, a decline in iron bioavailability due to rorqual depletion may have contributed to the rapid decline in overall Southern Ocean productivity during the last quarter of the 20th century. The results of this study underscore the need for further research on historical changes in the roles of top-down and bottom-up forcing in structuring the Southern Ocean food web.

  14. Effects of whaling on the structure of the Southern Ocean food web: insights on the "krill surplus" from ecosystem modelling.

    Directory of Open Access Journals (Sweden)

    Szymon Surma

    Full Text Available The aim of this study was to examine the ecological plausibility of the "krill surplus" hypothesis and the effects of whaling on the Southern Ocean food web using mass-balance ecosystem modelling. The depletion trajectory and unexploited biomass of each rorqual population in the Antarctic was reconstructed using yearly catch records and a set of species-specific surplus production models. The resulting estimates of the unexploited biomass of Antarctic rorquals were used to construct an Ecopath model of the Southern Ocean food web existing in 1900. The rorqual depletion trajectory was then used in an Ecosim scenario to drive rorqual biomasses and examine the "krill surplus" phenomenon and whaling effects on the food web in the years 1900-2008. An additional suite of Ecosim scenarios reflecting several hypothetical trends in Southern Ocean primary productivity were employed to examine the effect of bottom-up forcing on the documented krill biomass trend. The output of the Ecosim scenarios indicated that while the "krill surplus" hypothesis is a plausible explanation of the biomass trends observed in some penguin and pinniped species in the mid-20th century, the excess krill biomass was most likely eliminated by a rapid decline in primary productivity in the years 1975-1995. Our findings suggest that changes in physical conditions in the Southern Ocean during this time period could have eliminated the ecological effects of rorqual depletion, although the mechanism responsible is currently unknown. Furthermore, a decline in iron bioavailability due to rorqual depletion may have contributed to the rapid decline in overall Southern Ocean productivity during the last quarter of the 20th century. The results of this study underscore the need for further research on historical changes in the roles of top-down and bottom-up forcing in structuring the Southern Ocean food web.

  15. A model for the oceanic mass balance of rhenium and implications for the extent of Proterozoic ocean anoxia

    Science.gov (United States)

    Sheen, Alex I.; Kendall, Brian; Reinhard, Christopher T.; Creaser, Robert A.; Lyons, Timothy W.; Bekker, Andrey; Poulton, Simon W.; Anbar, Ariel D.

    2018-04-01

    Emerging geochemical evidence suggests that the atmosphere-ocean system underwent a significant decrease in O2 content following the Great Oxidation Event (GOE), leading to a mid-Proterozoic ocean (ca. 2.0-0.8 Ga) with oxygenated surface waters and predominantly anoxic deep waters. The extent of mid-Proterozoic seafloor anoxia has been recently estimated using mass-balance models based on molybdenum (Mo), uranium (U), and chromium (Cr) enrichments in organic-rich mudrocks (ORM). Here, we use a temporal compilation of concentrations for the redox-sensitive trace metal rhenium (Re) in ORM to provide an independent constraint on the global extent of mid-Proterozoic ocean anoxia and as a tool for more generally exploring how the marine geochemical cycle of Re has changed through time. The compilation reveals that mid-Proterozoic ORM are dominated by low Re concentrations that overall are only mildly higher than those of Archean ORM and significantly lower than many ORM deposited during the ca. 2.22-2.06 Ga Lomagundi Event and during the Phanerozoic Eon. These temporal trends are consistent with a decrease in the oceanic Re inventory in response to an expansion of anoxia after an interval of increased oxygenation during the Lomagundi Event. Mass-balance modeling of the marine Re geochemical cycle indicates that the mid-Proterozoic ORM with low Re enrichments are consistent with extensive seafloor anoxia. Beyond this agreement, these new data bring added value because Re, like the other metals, responds generally to low-oxygen conditions but has its own distinct sensitivity to the varying environmental controls. Thus, we can broaden our capacity to infer nuanced spatiotemporal patterns in ancient redox landscapes. For example, despite the still small number of data, some mid-Proterozoic ORM units have higher Re enrichments that may reflect a larger oceanic Re inventory during transient episodes of ocean oxygenation. An improved understanding of the modern oceanic Re

  16. Pellet culture model for human primary osteoblasts.

    Science.gov (United States)

    Jähn, K; Richards, R G; Archer, C W; Stoddart, M J

    2010-09-06

    In vitro monolayer culture of human primary osteoblasts (hOBs) often shows unsatisfactory results for extracellular matrix deposition, maturation and calcification. Nevertheless, monolayer culture is still the method of choice for in vitro differentiation of primary osteoblasts. We believe that the delay in mature ECM production by the monolayer cultured osteoblasts is determined by their state of cell maturation. A functional relationship between the inhibition of osteoblast proliferation and the induction of genes associated with matrix maturation was suggested within a monolayer culture model for rat calvarial osteoblasts. We hypothesize, that a pellet culture model could be utilized to decrease initial proliferation and increase the transformation of osteoblasts into a more mature phenotype. We performed pellet cultures using hOBs and compared their differentiation potential to 2D monolayer cultures. Using the pellet culture model, we were able to generate a population of cuboidal shaped central osteoblastic cells. Increased proliferation, as seen during low-density monolayer culture, was absent in pellet cultures and monolayers seeded at 40,000 cells/cm2. Moreover, the expression pattern of phenotypic markers Runx2, osterix, osteocalcin, col I and E11 mRNA was significantly different depending on whether the cells were cultured in low density monolayer, high density monolayer or pellet culture. We conclude that the transformation of the osteoblast phenotype in vitro to a more mature stage can be achieved more rapidly in 3D culture. Moreover, that dense monolayer leads to the formation of more mature osteoblasts than low-density seeded monolayer, while hOB cells in pellets seem to have transformed even further along the osteoblast phenotype.

  17. Pellet culture model for human primary osteoblasts

    Directory of Open Access Journals (Sweden)

    K Jähn

    2010-09-01

    Full Text Available In vitro monolayer culture of human primary osteoblasts (hOBs often shows unsatisfactory results for extracellular matrix deposition, maturation and calcification. Nevertheless, monolayer culture is still the method of choice for in vitro differentiation of primary osteoblasts. We believe that the delay in mature ECM production by the monolayer cultured osteoblasts is determined by their state of cell maturation. A functional relationship between the inhibition of osteoblast proliferation and the induction of genes associated with matrix maturation was suggested within a monolayer culture model for rat calvarial osteoblasts. We hypothesize, that a pellet culture model could be utilized to decrease initial proliferation and increase the transformation of osteoblasts into a more mature phenotype. We performed pellet cultures using hOBs and compared their differentiation potential to 2D monolayer cultures. Using the pellet culture model, we were able to generate a population of cuboidal shaped central osteoblastic cells. Increased proliferation, as seen during low-density monolayer culture, was absent in pellet cultures and monolayers seeded at 40,000 cells/cm2. Moreover, the expression pattern of phenotypic markers Runx2, osterix, osteocalcin, col I and E11 mRNA was significantly different depending on whether the cells were cultured in low density monolayer, high density monolayer or pellet culture. We conclude that the transformation of the osteoblast phenotype in vitro to a more mature stage can be achieved more rapidly in 3D culture. Moreover, that dense monolayer leads to the formation of more mature osteoblasts than low-density seeded monolayer, while hOB cells in pellets seem to have transformed even further along the osteoblast phenotype.

  18. Modelling the stochastic behaviour of primary nucleation.

    Science.gov (United States)

    Maggioni, Giovanni Maria; Mazzotti, Marco

    2015-01-01

    We study the stochastic nature of primary nucleation and how it manifests itself in a crystallisation process at different scales and under different operating conditions. Such characteristics of nucleation are evident in many experiments where detection times of crystals are not identical, despite identical experimental conditions, but instead are distributed around an average value. While abundant experimental evidence has been reported in the literature, a clear theoretical understanding and an appropriate modelling of this feature is still missing. In this contribution, we present two models describing a batch cooling crystallisation, where the interplay between stochastic nucleation and deterministic crystal growth is described differently in each. The nucleation and growth rates of the two models are estimated by a comprehensive set of measurements of paracetamol crystallisation from aqueous solution in a 1 mL vessel [Kadam et al., Chemical Engineering Science, 2012, 72, 10-19]. Both models are applied to the cooling crystallisation process above under different operating conditions, i.e. different volumes, initial concentrations, cooling rates. The advantages and disadvantages of the two approaches are illustrated and discussed, with particular reference to their use across scales of nucleation rate measured in very small crystallisers.

  19. [Experience of implementing a primary attention model].

    Science.gov (United States)

    Ruiz-Rodríguez, Myriam; Acosta-Ramírez, Naydú; Rodríguez Villamizar, Laura A; Uribe, Luz M; León-Franco, Martha

    2011-12-01

    Identifying barriers and dynamic factors in setting up a primary health care (PHC) model in the Santander department during the last decade. This was a qualitative study, focusing on pluralism and triangulating sources and actors, with a critical analysis of limits and judgments values (boundary critique). Philosophical/conceptual and operational management problems were found from the emergent categories related to appropriating PHC attributes. The theoretical model design was in fact not developed in practice. The PHC strategy is selective and state-led (at department level), focusing on rural interventions developed by nursing assistants and orientated towards fulfilling public health goals in the first healthcare level. Difficulties at national, state and local level were identified which could be useful in other national and international contexts. Structural healthcare system market barriers were the most important constraints since the model operates through the contractual logic of institutional segmentation and operational fragmentation. Human resource management focusing on skills, suitable local health management and systematic evaluation studies would thus be suggested as essential operational elements for facing the aforementioned problems and encourage an integral PHC model in Colombia.

  20. Carbonate-silicate cycle models of the long-term carbon cycle, carbonate accumulation in the oceans, and climate

    International Nuclear Information System (INIS)

    Caldeira, K.G.

    1991-01-01

    Several models of the long-term carbon cycle, incorporating models of the carbonate-silicate cycle, were developed and utilized to investigate issues relating to global climate and the causes and consequences of changes in calcium carbonate accumulation in the oceans. Model results indicate that the marked mid-Cretaceous (120 Ma) global warming could be explained by increased rates of release of carbon dioxide from subduction-zone metamorphism and mid-ocean-ridges, in conjunction with paleogeographic factors. Since the mid-Cretaceous, the primary setting for calcium carbonate accumulation in the oceans has shifted from shallow-water to deep-water environments. Model results suggest that this shift could have major consequences for the carbonate-silicate cycle and climate, and lead to significant increases in the flux of metamorphic carbon dioxide to the atmosphere. Increases in pelagic carbonate productivity, and decreases in tropical shallow-water area available for neritic carbonate accumulation, have both been proposed as the primary cause of this shift. Two lines of evidence developed here (one involving a statistical analysis of Tertiary carbonate-accumulation and oxygen-isotope data, and another based on modeling the carbonate-silicate cycle and ocean chemistry) suggest that a decrease in tropical shallow-water area was more important than increased pelagic productivity in explaining this shift. Model investigations of changes in ocean chemistry at the Cretaceous/Tertiary (K/T) boundary (66 Ma) indicate that variations in deep-water carbonate productivity may affect shallow-water carbonate accumulation rates through a mechanism involving surface-water carbonate-ion concentration. In the aftermath of the K/T boundary event, deep-water carbonate production and accumulation were significantly reduced as a result of the extinction of calcareous plankton

  1. Integrating Magnetic and Modelling Approaches to Reconstruct Ocean Circulation at the LGM

    Science.gov (United States)

    Watkins, S.; Maher, B.; Bigg, G.

    2008-12-01

    Formation of N. Atlantic Deep Water (NADW) is an important component of the ocean thermohaline circulation but debate exists over the ocean circulation state during glacial stages. Some geological and modelling studies suggest decreased NADW and increased formation of Southern Ocean deep water during the Last Glacial Maximum (LGM); others indicate similar, or higher, rates of NADW advection. Here, we use an innovative, integrated approach combining ocean and general circulation model results with ground- truthing measurements of sediment magnetic properties, in order to test two different potential LGM ocean states. We compare modelled iceberg trajectories produced by each of the stable modeled ocean states with magnetically-mapped patterns and sources of LGM ice-rafted debris (IRD). One LGM state is characterised by vigorous NADW formation; the other by dominant deep water production in the Southern Ocean. Cluster analysis of sediment magnetic properties was used to characterise N. Atlantic IRD patterns and sources, which match most closely iceberg trajectories arising from some combination of the 'southern-sinking' and 'intermediate' ocean circulation states. The magnetic data indicate two major IRD sources, Fennoscandia and Greenland/Iceland, and one minor source, the St Lawrence region. The model and magnetic data suggest that the LGM N. Atlantic circulation was dominated by a cyclonic central N. Atlantic gyre, separated from the N. Atlantic Current which was displaced south of ~ 42 oN. This approach can provide discriminatory evidence and validation of past ocean circulation states, on an ocean-wide and non-sample destructive basis.

  2. Asymmetric response of the Atlantic Meridional Ocean Circulation to freshwater anomalies in a strongly-eddying global ocean model

    NARCIS (Netherlands)

    Brunnabend, Sandra Esther|info:eu-repo/dai/nl/371740878; Dijkstra, Henk A.|info:eu-repo/dai/nl/073504467

    2017-01-01

    The Atlantic Meridional Overturning Circulation (AMOC) responds sensitively to density changes in regions of deepwater formation. In this paper, we investigate the nonlinear response of the AMOC to large amplitude freshwater changes around Greenland using a strongly-eddying global ocean model. Due

  3. Evaluation of Global Ocean Data Assimilation Experiment Products on South Florida Nested Simulations with the Hybrid Coordinate Ocean Model

    Science.gov (United States)

    2009-01-01

    Ongoing simula- tions and prediction with GODAE global and basin-scale models have fulfilled the main GODAE objectives of developing state-of-the- art ...discussions and Viva Benzon (UM/RSMAS Satellite Group) for preparing the composite ocean color image. References Beardsley RC, Butman B (1974

  4. Estimation of oceanic subsurface mixing under a severe cyclonic storm using a coupled atmosphere-ocean-wave model

    Science.gov (United States)

    Prakash, Kumar Ravi; Nigam, Tanuja; Pant, Vimlesh

    2018-04-01

    A coupled atmosphere-ocean-wave model was used to examine mixing in the upper-oceanic layers under the influence of a very severe cyclonic storm Phailin over the Bay of Bengal (BoB) during 10-14 October 2013. The coupled model was found to improve the sea surface temperature over the uncoupled model. Model simulations highlight the prominent role of cyclone-induced near-inertial oscillations in subsurface mixing up to the thermocline depth. The inertial mixing introduced by the cyclone played a central role in the deepening of the thermocline and mixed layer depth by 40 and 15 m, respectively. For the first time over the BoB, a detailed analysis of inertial oscillation kinetic energy generation, propagation, and dissipation was carried out using an atmosphere-ocean-wave coupled model during a cyclone. A quantitative estimate of kinetic energy in the oceanic water column, its propagation, and its dissipation mechanisms were explained using the coupled atmosphere-ocean-wave model. The large shear generated by the inertial oscillations was found to overcome the stratification and initiate mixing at the base of the mixed layer. Greater mixing was found at the depths where the eddy kinetic diffusivity was large. The baroclinic current, holding a larger fraction of kinetic energy than the barotropic current, weakened rapidly after the passage of the cyclone. The shear induced by inertial oscillations was found to decrease rapidly with increasing depth below the thermocline. The dampening of the mixing process below the thermocline was explained through the enhanced dissipation rate of turbulent kinetic energy upon approaching the thermocline layer. The wave-current interaction and nonlinear wave-wave interaction were found to affect the process of downward mixing and cause the dissipation of inertial oscillations.

  5. Evaluation of Ocean Tide Models Used for Jason-2 Altimetry Corrections

    DEFF Research Database (Denmark)

    Fok, H.S.; Baki Iz, H.; Shum, C. K.

    2010-01-01

    It has been more than a decade since the last comprehensive accuracy assessment of global ocean tide models. Here, we conduct an evaluation of the barotropic ocean tide corrections, which were computed using FES2004 and GOT00.2, and other models on the Jason-2 altimetry Geophysical Data Record (GDR......), with a focus on selected coastal regions with energetic ocean dynamics. We compared nine historical and contemporary ocean tide models with pelagic tidal constants and with multiple satellite altimetry mission (T/P, ERS-1/-2, Envisat, GFO, Jason-1/-2) sea level anomalies using variance reduction studies.......All accuracy assessment methods show consistent results.We conclude that all the contemporary ocean tide models evaluated have similar performance in the selected coastal regions. However, their accuracies are region-dependent and overall are significantly worse than those in the deep-ocean, which are at the 2...

  6. Ocean Futures Under Ocean Acidification, Marine Protection, and Changing Fishing Pressures Explored Using a Worldwide Suite of Ecosystem Models

    Directory of Open Access Journals (Sweden)

    Erik Olsen

    2018-03-01

    Full Text Available Ecosystem-based management (EBM of the ocean considers all impacts on and uses of marine and coastal systems. In recent years, there has been a heightened interest in EBM tools that allow testing of alternative management options and help identify tradeoffs among human uses. End-to-end ecosystem modeling frameworks that consider a wide range of management options are a means to provide integrated solutions to the complex ocean management problems encountered in EBM. Here, we leverage the global advances in ecosystem modeling to explore common opportunities and challenges for ecosystem-based management, including changes in ocean acidification, spatial management, and fishing pressure across eight Atlantis (atlantis.cmar.csiro.au end-to-end ecosystem models. These models represent marine ecosystems from the tropics to the arctic, varying in size, ecology, and management regimes, using a three-dimensional, spatially-explicit structure parametrized for each system. Results suggest stronger impacts from ocean acidification and marine protected areas than from altering fishing pressure, both in terms of guild-level (i.e., aggregations of similar species or groups biomass and in terms of indicators of ecological and fishery structure. Effects of ocean acidification were typically negative (reducing biomass, while marine protected areas led to both “winners” and “losers” at the level of particular species (or functional groups. Changing fishing pressure (doubling or halving had smaller effects on the species guilds or ecosystem indicators than either ocean acidification or marine protected areas. Compensatory effects within guilds led to weaker average effects at the guild level than the species or group level. The impacts and tradeoffs implied by these future scenarios are highly relevant as ocean governance shifts focus from single-sector objectives (e.g., sustainable levels of individual fished stocks to taking into account competing

  7. Primary and Secondary Organic Marine Aerosol and Oceanic Biological Activity: Recent Results and New Perspectives for Future Studies

    Directory of Open Access Journals (Sweden)

    Matteo Rinaldi

    2010-01-01

    Full Text Available One of the most important natural aerosol systems at the global level is marine aerosol that comprises both organic and inorganic components of primary and secondary origin. The present paper reviews some new results on primary and secondary organic marine aerosol, achieved during the EU project MAP (Marine Aerosol Production, comparing them with those reported in the recent literature. Marine aerosol samples collected at the coastal site of Mace Head, Ireland, show a chemical composition trend that is influenced by the oceanic biological activity cycle, in agreement with other observations. Laboratory experiments show that sea-spray aerosol from biologically active sea water can be highly enriched in organics, and the authors highlight the need for further studies on the atmospheric fate of such primary organics. With regard to the secondary fraction of organic aerosol, the average chemical composition and molecular tracer (methanesulfonic-acid, amines distribution could be successfully characterized by adopting a multitechnique analytical approach.

  8. Net primary productivity collected from New Horizon in Gulf of California and North Pacific Ocean from 2004-07-14 to 2008-08-06 (NCEI Accession 0130076)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Net primary productivity determined from 13C-labeled in situ incubations. Water collected via Niskin bottle was incubated with labeled bicarbonate for 24 hours at...

  9. South African seasonal rainfall prediction performance by a coupled ocean-atmosphere model

    CSIR Research Space (South Africa)

    Landman, WA

    2010-12-01

    Full Text Available Evidence is presented that coupled ocean-atmosphere models can already outscore computationally less expensive atmospheric models. However, if the atmospheric models are forced with highly skillful SST predictions, they may still be a very strong...

  10. Seasonal Distributions of Global Ocean Chlorophyll and Nutrients: Analysis with a Coupled Ocean General Circulation Biogeochemical, and Radiative Model

    Science.gov (United States)

    Gregg, Watson W.

    1999-01-01

    A coupled general ocean circulation, biogeochemical, and radiative model was constructed to evaluate and understand the nature of seasonal variability of chlorophyll and nutrients in the global oceans. The model is driven by climatological meteorological conditions, cloud cover, and sea surface temperature. Biogeochemical processes in the model are determined from the influences of circulation and turbulence dynamics, irradiance availability, and the interactions among three functional phytoplankton groups (diatoms, chorophytes, and picoplankton) and three nutrient groups (nitrate, ammonium, and silicate). Phytoplankton groups are initialized as homogeneous fields horizontally and vertically, and allowed to distribute themselves according to the prevailing conditions. Basin-scale model chlorophyll results are in very good agreement with CZCS pigments in virtually every global region. Seasonal variability observed in the CZCS is also well represented in the model. Synoptic scale (100-1000 km) comparisons of imagery are also in good conformance, although occasional departures are apparent. Agreement of nitrate distributions with in situ data is even better, including seasonal dynamics, except for the equatorial Atlantic. The good agreement of the model with satellite and in situ data sources indicates that the model dynamics realistically simulate phytoplankton and nutrient dynamics on synoptic scales. This is especially true given that initial conditions are homogenous chlorophyll fields. The success of the model in producing a reasonable representation of chlorophyll and nutrient distributions and seasonal variability in the global oceans is attributed to the application of a generalized, processes-driven approach as opposed to regional parameterization, and the existence of multiple phytoplankton groups with different physiological and physical properties. These factors enable the model to simultaneously represent the great diversity of physical, biological

  11. Reproducibility and Transparency in Ocean-Climate Modeling

    Science.gov (United States)

    Hannah, N.; Adcroft, A.; Hallberg, R.; Griffies, S. M.

    2015-12-01

    Reproducibility is a cornerstone of the scientific method. Within geophysical modeling and simulation achieving reproducibility can be difficult, especially given the complexity of numerical codes, enormous and disparate data sets, and variety of supercomputing technology. We have made progress on this problem in the context of a large project - the development of new ocean and sea ice models, MOM6 and SIS2. Here we present useful techniques and experience.We use version control not only for code but the entire experiment working directory, including configuration (run-time parameters, component versions), input data and checksums on experiment output. This allows us to document when the solutions to experiments change, whether due to code updates or changes in input data. To avoid distributing large input datasets we provide the tools for generating these from the sources, rather than provide raw input data.Bugs can be a source of non-determinism and hence irreproducibility, e.g. reading from or branching on uninitialized memory. To expose these we routinely run system tests, using a memory debugger, multiple compilers and different machines. Additional confidence in the code comes from specialised tests, for example automated dimensional analysis and domain transformations. This has entailed adopting a code style where we deliberately restrict what a compiler can do when re-arranging mathematical expressions.In the spirit of open science, all development is in the public domain. This leads to a positive feedback, where increased transparency and reproducibility makes using the model easier for external collaborators, who in turn provide valuable contributions. To facilitate users installing and running the model we provide (version controlled) digital notebooks that illustrate and record analysis of output. This has the dual role of providing a gross, platform-independent, testing capability and a means to documents model output and analysis.

  12. Effects of ocean acidification on primary production in a coastal North Sea phytoplankton community

    NARCIS (Netherlands)

    Eberlein, Tim; Wohlrab, Sylke; Rost, Björn; John, Uwe; Bach, Lennart T.; Riebesell, U.; Van de Waal, D.B.

    2017-01-01

    We studied the effect of ocean acidification (OA) on a coastal North Sea plankton community in a long-term mesocosm CO2-enrichment experiment (BIOACID II long-term mesocosm study). From March to July 2013, 10 mesocosms of 19 m length with a volume of 47.5 to 55.9 m3 were deployed in the Gullmar

  13. Evaluation of existing ecosystem models with regard to ocean acidification

    NARCIS (Netherlands)

    Van Engeland, T.; Soetaert, K.; Middelburg, J.J.; Schartau, M.; Hohn, S.; Oschlies, A.

    2011-01-01

    Although the carbonate chemistry and physical aspects of ocean acidification are well constrained, its biological effects are not fully understood. Experimental research has shown large variability in responses to increased atmospheric CO2 input into the ocean, ranging from positive to zero and

  14. Dispersion of tracers by the oceanic eddy field modelling programme

    International Nuclear Information System (INIS)

    Richards, K.J.; O'Farrell, S.P.

    1987-01-01

    A numerical model has been developed to study the dispersion of tracers by the oceanic eddy field. The present study is designed to study the dispersion of particles in a mesoscale eddy field produced by the numerical model. Dispersion rates are calculated for flows above three types of topography, a flat bottom, a random collection of hills and a ridge. The presence of topography is found to significantly affect the flow. The effective diffusion coefficient of the flow near the bottom is reduced by 20% for the random topography and 60% for the ridge from that for the flat bottom case. Estimates are given of the number of float years required to obtain a given accuracy for the diffusion coefficient. At the surface a modest number of floats (order 5) are required to obtain a 50% accuracy. However at the bottom, to be within a factor of 2 of the true value for the flows considered requires respectively 26, 42 and 103 float years for the flat, random and ridge cases. (author)

  15. The DTU12MDT global mean dynamic topography and ocean circulation model

    DEFF Research Database (Denmark)

    Knudsen, Per; Andersen, Ole B.

    2013-01-01

    The Gravity and Ocean Circulation Experiment - GOCE satellite mission measure the Earth gravity field with unprecedented accuracy leading to substantial improvements in the modelling of the ocean circulation and transport. In this study of the performance of GOCE, a newer gravity model has been...

  16. A Southern Ocean variability study using the Argo-based Model for Investigation of the Global Ocean (AMIGO)

    Science.gov (United States)

    Lebedev, Konstantin

    2017-04-01

    The era of satellite observations of the ocean surface that started at the end of the 20th century and the development of the Argo project in the first years of the 21st century, designed to collect information of the upper 2000 m of the ocean using satellites, provides unique opportunities for continuous monitoring of the Global Ocean state. Starting from 2005, measurements with the Argo floats have been performed over the majority of the World Ocean. In November 2007, the Argo program reached coverage of 3000 simultaneously operating floats (one float in a three-degree square) planned during the development of the program. Currently, 4000 Argo floats autonomously profile the upper 2000-m water column of the ocean from Antarctica to Spitsbergen increasing World Ocean temperature and salinity databases by 12000 profiles per month. This makes it possible to solve problems on reconstructing and monitoring the ocean state on an almost real-time basis, study the ocean dynamics, obtain reasonable estimates of the climatic state of the ocean in the last decade and estimate existing intraclimatic trends. We present the newly developed Argo-Based Model for Investigation of the Global Ocean (AMIGO), which consists of a block for variational interpolation of the profiles of drifting Argo floats to a regular grid and a block for model hydrodynamic adjustment of variationally interpolated fields. Such a method makes it possible to obtain a full set of oceanographic characteristics - temperature, salinity, density, and current velocity - using irregularly located Argo measurements (the principle of the variational interpolation technique entails minimization of the misfit between the interpolated fields defined on the regular grid and irregularly distributed data; hence the optimal solution passes as close to the data as possible). The simulations were performed for the entire globe limited in the north by 85.5° N using 1° grid spacing in both longitude and latitude. At the

  17. On the primary emission of formic acid from light duty gasoline vehicles and ocean-going vessels

    Science.gov (United States)

    Crisp, Timia A.; Brady, James M.; Cappa, Christopher D.; Collier, Sonya; Forestieri, Sara D.; Kleeman, Michael J.; Kuwayama, Toshihiro; Lerner, Brian M.; Williams, Eric J.; Zhang, Qi; Bertram, Timothy H.

    2014-12-01

    We present determinations of fuel-based emission factors for formic acid (EFHCOOH) from light duty gasoline vehicles (LDGVs) and in-use ocean-going vessels. Emission ratios, from which the emission factors were derived, were determined from LDGVs through measurement of HCOOH and carbon dioxide (CO2) in the exhaust of a fleet of eight LDGVs driven under the California Unified Cycle at the California Air Resources Board's Haagen-Smit Laboratory. Emission ratios from in-use ocean-going vessels were determined through direct measurement of HCOOH and CO2 in ship plumes intercepted by the R/V Atlantis during the 2010 California Research at the Nexus of Air Quality and Climate Change (CalNex) campaign within 24 nautical miles of the California coast. The eight car fleet average EFHCOOH was 0.94 ± 0.32 (1σ) and 0.57 ± 0.18 mg (kg fuel)-1 for the cold start and hot running phases of the drive cycle, respectively. This difference suggests that catalytic converter performance and the air/fuel equivalence ratio are important metrics contributing to EFHCOOH. EFHCOOH was determined to be 1.94 ± 1.06 mg (kg fuel)-1 for a single diesel vehicle driven under highway driving conditions, higher on average than any individual LDGV tested. In comparison, HCOOH primary emissions from in-use ocean-going vessels were substantially larger, averaging 20.89 ± 8.50 mg (kg fuel)-1. On a global scale, HCOOH primary emissions from fossil fuel combustion are likely to be insignificant relative to secondary production mechanisms, however primary emissions may contribute more significantly on a finer, regional scale in urban locations.

  18. Towards Next Generation Ocean Models: Novel Discontinuous Galerkin Schemes for 2D Unsteady Biogeochemical Models

    Science.gov (United States)

    2009-09-01

    FVCOM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33 2.7 ICOM ...coastal re- gions featured with complex irregular geometry and steep bottom topography. ICOM Imperial College Ocean Model FEM (CG and DG) using...the ICOM group. This code is written in C. Finel was also developed by the same group, and it is a three-dimensional non- hydrostatic finite element

  19. A first appraisal of prognostic ocean DMS models and prospects for their use in climate models

    NARCIS (Netherlands)

    Le Clainche, Yvonnick; Vezina, Alain; Levasseur, Maurice; Cropp, Roger A.; Gunson, Jim R.; Vallina, Sergio M.; Vogt, Meike; Lancelot, Christiane; Allen, J. Icarus; Archer, Stephen D.; Bopp, Laurent; Deal, Clara; Elliott, Scott; Jin, Meibing; Malin, Gill; Schoemann, Veronique; Simo, Rafel; Six, Katharina D.; Stefels, Jacqueline

    2010-01-01

    Ocean dimethylsulfide (DMS) produced by marine biota is the largest natural source of atmospheric sulfur, playing a major role in the formation and evolution of aerosols, and consequently affecting climate. Several dynamic process-based DMS models have been developed over the last decade, and work

  20. Response to Filchner-Ronne Ice Shelf cavity warming in a coupled ocean-ice sheet model - Part 1: The ocean perspective

    OpenAIRE

    Timmermann, Ralph; Goeller, Sebastian

    2017-01-01

    The Regional Antarctic ice and Global Ocean (RAnGO) model has been developed to study the interaction between the world ocean and the Antarctic ice sheet. The coupled model is based on a global implementation of the Finite Element Sea-ice Ocean Model (FESOM) with a mesh refinement in the Southern Ocean, particularly in its marginal seas and in the sub-ice-shelf cavities. The cryosphere is represented by a regional setup of the ice flow model RIMBAY comprising the Filchner–Ro...

  1. Bacteria in the greenhouse: Modeling the role of oceanic plankton in the global carbon cycle

    International Nuclear Information System (INIS)

    Ducklow, H.W.; Fasham, M.J.R.

    1992-01-01

    To plan effectively to deal with the greenhouse effect, a fundamental understanding is needed of the biogeochemical and physical machinery that cycles carbon in the global system; in addition, models are needed of the carbon cycle to project the effects of increasing carbon dioxide. In this chapter, a description is given of efforts to simulate the cycling of carbon and nitrogen in the upper ocean, concentrating on the model's treatment of marine phytoplankton, and what it reveals of their role in the biogeochemical cycling of carbon between the ocean and atmosphere. The focus is on the upper ocean because oceanic uptake appears to regulate the level of carbon dioxide in the atmosphere

  2. Trace-element budgets in the Ohio/Sunbury shales of Kentucky: Constraints on ocean circulation and primary productivity in the Devonian-Mississippian Appalachian Basin

    Science.gov (United States)

    Perkins, R.B.; Piper, D.Z.; Mason, C.E.

    2008-01-01

    The hydrography of the Appalachian Basin in late Devonian-early Mississippian time is modeled based on the geochemistry of black shales and constrained by others' paleogeographic reconstructions. The model supports a robust exchange of basin bottom water with the open ocean, with residence times of less than forty years during deposition of the Cleveland Shale Member of the Ohio Shale. This is counter to previous interpretations of these carbon-rich units having accumulated under a stratified and stagnant water column, i.e., with a strongly restricted bottom bottom-water circulation. A robust circulation of bottom waters is further consistent with the palaeoclimatology, whereby eastern trade-winds drove upwelling and arid conditions limited terrestrial inputs of siliciclastic sediment, fresh waters, and riverine nutrients. The model suggests that primary productivity was high (~ 2??g C m- 2 d- 1), although no higher than in select locations in the ocean today. The flux of organic carbon settling through the water column and its deposition on the sea floor was similar to fluxes found in modern marine environments. Calculations based on the average accumulation rate of the marine fraction of Ni suggest the flux of organic carbon settling out of the water column was approximately 9% of primary productivity, versus an accumulation rate (burial) of organic carbon of 0.5% of primary productivity. Trace-element ratios of V:Mo and Cr:Mo in the marine sediment fraction indicate that bottom waters shifted from predominantly anoxic (sulfate reducing) during deposition of the Huron Shale Member of the Ohio Shale to predominantly suboxic (nitrate reducing) during deposition of the Cleveland Shale Member and the Sunbury Shale, but with anoxic conditions occurring intermittently throughout this period. ?? 2008 Elsevier B.V.

  3. Coupled model of INM-IO global ocean model, CICE sea ice model and SCM OIAS framework

    Science.gov (United States)

    Bayburin, Ruslan; Rashit, Ibrayev; Konstantin, Ushakov; Vladimir, Kalmykov; Gleb, Dyakonov

    2015-04-01

    Status of coupled Arctic model of ocean and sea ice is presented. Model consists of INM IO global ocean component of high resolution, Los Alamos National Laboratory CICE sea ice model and a framework SCM OIAS for the ocean-ice-atmosphere-land coupled modeling on massively-parallel architectures. Model is currently under development at the Institute of Numerical Mathematics (INM), Hydrometeorological Center (HMC) and P.P. Shirshov Institute of Oceanology (IO). Model is aimed at modeling of intra-annual variability of hydrodynamics in Arctic and. The computational characteristics of the world ocean-sea ice coupled model governed by SCM OIAS are presented. The model is parallelized using MPI technologies and currently can use efficiently up to 5000 cores. Details of programming implementation, computational configuration and physical phenomena parametrization are analyzed in terms of intercoupling complex. Results of five year computational experiment of sea ice, snow and ocean state evolution in Arctic region on tripole grid with horizontal resolution of 3-5 kilometers, closed by atmospheric forcing field from repeating "normal" annual course taken from CORE1 experiment data base are presented and analyzed in terms of the state of vorticity and warm Atlantic water expansion.

  4. Baroclinic stabilization effect of the Atlantic-Arctic water exchange simulated by the eddy-permitting ocean model and global atmosphere-ocean model

    Science.gov (United States)

    Moshonkin, Sergey; Bagno, Alexey; Gritsun, Andrey; Gusev, Anatoly

    2017-04-01

    Numerical experiments were performed with the global atmosphere-ocean model INMCM5 (for version of the international project CMIP6, resolution for atmosphere is 2°x1.5°, 21 level) and with the three-dimensional, free surface, sigma coordinate eddy-permitting ocean circulation model for Atlantic (from 30°S) - Arctic and Bering sea domain (0.25 degrees resolution, Institute of Numerical Mathematics Ocean Model or INMOM). Spatial resolution of the INMCM5 oceanic component is 0.5°x0.25°. Both models have 40 s-levels in ocean. Previously, the simulations were carried out for INMCM5 to generate climatic system stable state. Then model was run for 180 years. In the experiment with INMOM, CORE-II data for 1948-2009 were used. As the goal for comparing results of two these numerical models, we selected evolution of the density and velocity anomalies in the 0-300m active ocean layer near Fram Strait in the Greenland Sea, where oceanic cyclonic circulation influences Atlantic-Arctic water exchange. Anomalies were count without climatic seasonal cycle for time scales smaller than 30 years. We use Singular Value Decomposition analysis (SVD) for density-velocity anomalies with time lag from minus one to six months. Both models perform identical stable physical result. They reveal that changes of heat and salt transports by West Spitsbergen and East Greenland currents, caused by atmospheric forcing, produce the baroclinic modes of velocity anomalies in 0-300m layer, thereby stabilizing ocean response on the atmospheric forcing, which stimulates keeping water exchange between the North Atlantic and Arctic Ocean at the certain climatological level. The first SVD-mode of density-velocity anomalies is responsible for the cyclonic circulation variability. The second and third SVD-modes stabilize existing ocean circulation by the anticyclonic vorticity generation. The second and third SVD-modes give 35% of the input to the total dispersion of density anomalies and 16-18% of the

  5. Interdecadal variability in a hybrid coupled ocean-atmosphere-sea ice model

    OpenAIRE

    Kravtsov, S; Ghil, M

    2004-01-01

    Interdecadal climate variability in an idealized coupled ocean-atmosphere-sea-ice model is studied. The ocean component is a fully three-dimensional primitive equation model and the atmospheric component is a two-dimensional (2D) energy balance model of Budyko-Sellers-North type, while sea ice is represented by a 2D thermodynamic model. In a wide range of parameters the model climatology resembles certain aspects of observed climate. Two types of interdecadal variability are found. The first ...

  6. Adaptation of an unstructured-mesh, finite-element ocean model to the simulation of ocean circulation beneath ice shelves

    Science.gov (United States)

    Kimura, Satoshi; Candy, Adam S.; Holland, Paul R.; Piggott, Matthew D.; Jenkins, Adrian

    2013-07-01

    Several different classes of ocean model are capable of representing floating glacial ice shelves. We describe the incorporation of ice shelves into Fluidity-ICOM, a nonhydrostatic finite-element ocean model with the capacity to utilize meshes that are unstructured and adaptive in three dimensions. This geometric flexibility offers several advantages over previous approaches. The model represents melting and freezing on all ice-shelf surfaces including vertical faces, treats the ice shelf topography as continuous rather than stepped, and does not require any smoothing of the ice topography or any of the additional parameterisations of the ocean mixed layer used in isopycnal or z-coordinate models. The model can also represent a water column that decreases to zero thickness at the 'grounding line', where the floating ice shelf is joined to its tributary ice streams. The model is applied to idealised ice-shelf geometries in order to demonstrate these capabilities. In these simple experiments, arbitrarily coarsening the mesh outside the ice-shelf cavity has little effect on the ice-shelf melt rate, while the mesh resolution within the cavity is found to be highly influential. Smoothing the vertical ice front results in faster flow along the smoothed ice front, allowing greater exchange with the ocean than in simulations with a realistic ice front. A vanishing water-column thickness at the grounding line has little effect in the simulations studied. We also investigate the response of ice shelf basal melting to variations in deep water temperature in the presence of salt stratification.

  7. Effects of Southern Hemisphere Wind Changes on the Meridional Overturning Circulation in Ocean Models.

    Science.gov (United States)

    Gent, Peter R

    2016-01-01

    Observations show that the Southern Hemisphere zonal wind stress maximum has increased significantly over the past 30 years. Eddy-resolving ocean models show that the resulting increase in the Southern Ocean mean flow meridional overturning circulation (MOC) is partially compensated by an increase in the eddy MOC. This effect can be reproduced in the non-eddy-resolving ocean component of a climate model, providing the eddy parameterization coefficient is variable and not a constant. If the coefficient is a constant, then the Southern Ocean mean MOC change is balanced by an unrealistically large change in the Atlantic Ocean MOC. Southern Ocean eddy compensation means that Southern Hemisphere winds cannot be the dominant mechanism driving midlatitude North Atlantic MOC variability.

  8. Modeling Non-linear Ocean Wave Amplification in Coastal Settings

    Science.gov (United States)

    Harrington, J. P.; Cox, R.; Brennan, J.; Clancy, C.; Herterich, J.; Dias, F.

    2016-12-01

    Coastal boulder deposits occur in many locations worldwide, along high-energy coastlines. They contain clasts with masses >100 t in some cases, deposited many m above high water and many tens of m inland, often at the top of steep cliffs. The clasts are moved by storm waves, despite being at elevations and inshore distances that should be unreachable by recorded sea states. The question is, therefore, how are storm waves amplified to the extent needed to transport megagravel inshore? As climate changes, with the risk of increased storminess, it is important to understand this issue, as it is central to understanding inland transmission of fluid forces during storm events. Numerical modeling is a powerful technique for exploring this complex problem. We used a conformal mapping solution to Euler's equations to explore runup of 2D wave trains against a vertical barrier (simulating a coastal cliff). Previous research showed that modeled wave trains passing over flat bathymetry experience vertical runup up to 6 times the initial wave amplitude for both short- (3 times water depth) and long- (125 times depth) wavelength waves. We increased the model complexity by including a bathymetric step, causing an abrupt depth decrease before the cliff. We found that the uneven bathymetry further amplified both short- and long-wavelength waves. Short-wavelength simulations were hampered by our code's limitations in solving Euler's equations for steep waves, and crashed before reaching maximum runups: ongoing work focuses on solving the computational problems. These problems did not affect the long-wavelength simulations, however, which returned maximum runup values up to 10 times initial amplitude. The key message is that bathymetric effects can drive large wave-height amplifications. This suggests that enhanced runup for long-wavelength waves caused by variable bathymetry could be a key factor in cases where ocean waves overtop steep cliffs and transport boulders well above high

  9. The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model

    Directory of Open Access Journals (Sweden)

    M. Ödalen

    2018-03-01

    Full Text Available During the four most recent glacial cycles, atmospheric CO2 during glacial maxima has been lowered by about 90–100 ppm with respect to interglacials. There is widespread consensus that most of this carbon was partitioned in the ocean. It is, however, still debated which processes were dominant in achieving this increased carbon storage. In this paper, we use an Earth system model of intermediate complexity to explore the sensitivity of ocean carbon storage to ocean circulation state. We carry out a set of simulations in which we run the model to pre-industrial equilibrium, but in which we achieve different states of ocean circulation by changing forcing parameters such as wind stress, ocean diffusivity and atmospheric heat diffusivity. As a consequence, the ensemble members also have different ocean carbon reservoirs, global ocean average temperatures, biological pump efficiencies and conditions for air–sea CO2 disequilibrium. We analyse changes in total ocean carbon storage and separate it into contributions by the solubility pump, the biological pump and the CO2 disequilibrium component. We also relate these contributions to differences in the strength of the ocean overturning circulation. Depending on which ocean forcing parameter is tuned, the origin of the change in carbon storage is different. When wind stress or ocean diapycnal diffusivity is changed, the response of the biological pump gives the most important effect on ocean carbon storage, whereas when atmospheric heat diffusivity or ocean isopycnal diffusivity is changed, the solubility pump and the disequilibrium component are also important and sometimes dominant. Despite this complexity, we obtain a negative linear relationship between total ocean carbon and the combined strength of the northern and southern overturning cells. This relationship is robust to different reservoirs dominating the response to different forcing mechanisms. Finally, we conduct a drawdown experiment

  10. The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model

    Science.gov (United States)

    Ödalen, Malin; Nycander, Jonas; Oliver, Kevin I. C.; Brodeau, Laurent; Ridgwell, Andy

    2018-03-01

    During the four most recent glacial cycles, atmospheric CO2 during glacial maxima has been lowered by about 90-100 ppm with respect to interglacials. There is widespread consensus that most of this carbon was partitioned in the ocean. It is, however, still debated which processes were dominant in achieving this increased carbon storage. In this paper, we use an Earth system model of intermediate complexity to explore the sensitivity of ocean carbon storage to ocean circulation state. We carry out a set of simulations in which we run the model to pre-industrial equilibrium, but in which we achieve different states of ocean circulation by changing forcing parameters such as wind stress, ocean diffusivity and atmospheric heat diffusivity. As a consequence, the ensemble members also have different ocean carbon reservoirs, global ocean average temperatures, biological pump efficiencies and conditions for air-sea CO2 disequilibrium. We analyse changes in total ocean carbon storage and separate it into contributions by the solubility pump, the biological pump and the CO2 disequilibrium component. We also relate these contributions to differences in the strength of the ocean overturning circulation. Depending on which ocean forcing parameter is tuned, the origin of the change in carbon storage is different. When wind stress or ocean diapycnal diffusivity is changed, the response of the biological pump gives the most important effect on ocean carbon storage, whereas when atmospheric heat diffusivity or ocean isopycnal diffusivity is changed, the solubility pump and the disequilibrium component are also important and sometimes dominant. Despite this complexity, we obtain a negative linear relationship between total ocean carbon and the combined strength of the northern and southern overturning cells. This relationship is robust to different reservoirs dominating the response to different forcing mechanisms. Finally, we conduct a drawdown experiment in which we investigate

  11. Feedbacks of CO2 dependent dissolved organic carbon production on atmospheric CO2 in an ocean biogeochemical model

    Science.gov (United States)

    Bordelon-Katrynski, L. A.; Schneider, B.

    2012-07-01

    We use an ocean biogeochemical model to test whether a potential CO2 dependence of dissolved organic carbon (DOC) production may have an influence on marine carbon sequestration via particle aggregation and so may represent a potentially larger ocean sink for anthropogenic CO2. The hypothesis is based on mesocosm experiments that have shown enhanced carbon uptake by phytoplankton when more CO2 is available, and where the extra carbon was probably directly routed into DOC instead of the particulate phase. Sensitivity experiments are carried out where phytoplankton exudation of DOC is systematically increased with and without a parallel rise in atmospheric CO2. We find that under a fourfold increase of the DOC formation rate, there is a slight reduction of global particle export, which results in a shallower turnover of nutrients and carbon. As a consequence, a positive feedback loop develops, such that the ocean becomes a weak source of CO2 to the atmosphere. The effect is amplified under high CO2 conditions due to the decreased CO2 buffer capacity of the ocean, however, it is rather low compared to the total anthropogenic perturbation. The positive feedback is in contrast to a very similar study, where a slight stimulation of particle export was found. Therefore, we conclude that the sign of the feedback depends on the actual pathway the extra carbon is taking and on the overall background conditions of marine primary production and ocean circulation.

  12. The primary care amplification model: taking the best of primary care forward

    Directory of Open Access Journals (Sweden)

    Nicholson Caroline

    2008-12-01

    Full Text Available Abstract Background Primary care internationally is approaching a new paradigm. The change agenda implicit in this threatens to de-stabilise and challenge established general practice and primary care. Discussion The Primary Care Amplification Model offers a means to harness the change agenda by 'amplifying' the strengths of established general practices around a 'beacon' practice. Conclusion Such 'beacon' practices can provide a mustering point for an expanded scope of practice for primary care, integrated primary/secondary service delivery, interprofessional learning, relevant local clinical research, and a focus on local service innovation, enhancing rather than fragmenting the collective capacity of existing primary care.

  13. Research on model of additional forces of ocean conditions in one-dimensional coolant channel

    International Nuclear Information System (INIS)

    Qian Libo; Tian Wenxi; Qiu Suizheng; Su Guanghui; Li Yong; Huang Yanping; Yan Xiao

    2012-01-01

    The effect of different ocean conditions on coolant flow can come down to the differences of additional forces in the momentum equations, thus ocean conditions can be considered by adding the additional forces caused by them to the momentum equations. The model of additional forces of 6 types of typical and relevant coupled ocean conditions is obtained based on the basic momentum equation in the non-inertial reference frame and the one-dimensional coolant channel. (authors)

  14. Idealised modelling of ocean circulation driven by conductive and hydrothermal fluxes at the seabed

    Science.gov (United States)

    Barnes, Jowan M.; Morales Maqueda, Miguel A.; Polton, Jeff A.; Megann, Alex P.

    2018-02-01

    Geothermal heating is increasingly recognised as an important factor affecting ocean circulation, with modelling studies suggesting that this heat source could lead to first-order changes in the formation rate of Antarctic Bottom Water, as well as a significant warming effect in the abyssal ocean. Where it has been represented in numerical models, however, the geothermal heat flux into the ocean is generally treated as an entirely conductive flux, despite an estimated one third of the global geothermal flux being introduced to the ocean via hydrothermal sources. A modelling study is presented which investigates the sensitivity of the geothermally forced circulation to the way heat is supplied to the abyssal ocean. An analytical two-dimensional model of the circulation is described, which demonstrates the effects of a volume flux through the ocean bed. A simulation using the NEMO numerical general circulation model in an idealised domain is then used to partition a heat flux between conductive and hydrothermal sources and explicitly test the sensitivity of the circulation to the formulation of the abyssal heat flux. Our simulations suggest that representing the hydrothermal flux as a mass exchange indeed changes the heat distribution in the abyssal ocean, increasing the advective heat transport from the abyss by up to 35% compared to conductive heat sources. Consequently, we suggest that the inclusion of hydrothermal fluxes can be an important addition to course-resolution ocean models.

  15. Compartmental models for assessing the fishery production in the Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Dalal, S.G.; Parulekar, A.H.

    Compartmental models for assessing the fishery production in the Indian Ocean is discussed. The article examines the theoretical basis on which modern fishery sciences is built. The model shows that, large changes in energy flux from one pathway...

  16. A Practical Point Spread Model for Ocean Waters

    National Research Council Canada - National Science Library

    Hou, Weilin; Gray, Deric; Weidemann, Alan D; Arnone, Robert A

    2008-01-01

    .... These inherent optical properties (IOP), although measured frequently due to their important applications in ocean optics, especially in remote sensing, cannot be applied to underwater imaging issues directly, since they inherently reflect the chance of the single scattering.

  17. A vector radiative transfer model for coupled atmosphere and ocean systems with a rough interface

    International Nuclear Information System (INIS)

    Zhai Pengwang; Hu Yongxiang; Chowdhary, Jacek; Trepte, Charles R.; Lucker, Patricia L.; Josset, Damien B.

    2010-01-01

    We report on an exact vector (polarized) radiative transfer (VRT) model for coupled atmosphere and ocean systems. This VRT model is based on the successive order of scattering (SOS) method, which virtually takes all the multiple scattering processes into account, including atmospheric scattering, oceanic scattering, reflection and transmission through the rough ocean surface. The isotropic Cox-Munk wave model is used to derive the ref and transmission matrices for the rough ocean surface. Shadowing effects are included by the shadowing function. We validated the SOS results by comparing them with those calculated by two independent codes based on the doubling/adding and Monte Carlo methods. Two error analyses related to the ocean color remote sensing are performed in the coupled atmosphere and ocean systems. One is the scalar error caused by ignoring the polarization in the whole system. The other is the error introduced by ignoring the polarization of the light transmitted through the ocean interface. Both errors are significant for the cases studied. This code fits for the next generation of ocean color study because it converges fast for absorbing medium as, for instance, ocean.

  18. Impact of variable seawater conductivity on motional induction simulated with an ocean general circulation model

    Science.gov (United States)

    Irrgang, C.; Saynisch, J.; Thomas, M.

    2016-01-01

    Carrying high concentrations of dissolved salt, ocean water is a good electrical conductor. As seawater flows through the Earth's ambient geomagnetic field, electric fields are generated, which in turn induce secondary magnetic fields. In current models for ocean-induced magnetic fields, a realistic consideration of seawater conductivity is often neglected and the effect on the variability of the ocean-induced magnetic field unknown. To model magnetic fields that are induced by non-tidal global ocean currents, an electromagnetic induction model is implemented into the Ocean Model for Circulation and Tides (OMCT). This provides the opportunity to not only model ocean-induced magnetic signals but also to assess the impact of oceanographic phenomena on the induction process. In this paper, the sensitivity of the induction process due to spatial and temporal variations in seawater conductivity is investigated. It is shown that assuming an ocean-wide uniform conductivity is insufficient to accurately capture the temporal variability of the magnetic signal. Using instead a realistic global seawater conductivity distribution increases the temporal variability of the magnetic field up to 45 %. Especially vertical gradients in seawater conductivity prove to be a key factor for the variability of the ocean-induced magnetic field. However, temporal variations of seawater conductivity only marginally affect the magnetic signal.

  19. Costs of health care across primary care models in Ontario.

    Science.gov (United States)

    Laberge, Maude; Wodchis, Walter P; Barnsley, Jan; Laporte, Audrey

    2017-08-01

    The purpose of this study is to analyze the relationship between newly introduced primary care models in Ontario, Canada, and patients' primary care and total health care costs. A specific focus is on the payment mechanisms for primary care physicians, i.e. fee-for-service (FFS), enhanced-FFS, and blended capitation, and whether providers practiced as part of a multidisciplinary team. Utilization data for a one year period was measured using administrative databases for a 10% sample selected at random from the Ontario adult population. Primary care and total health care costs were calculated at the individual level and included costs from physician services, hospital visits and admissions, long term care, drugs, home care, lab tests, and visits to non-medical health care providers. Generalized linear model regressions were conducted to assess the differences in costs between primary care models. Patients not enrolled with a primary care physicians were younger, more likely to be males and of lower socio-economic status. Patients in blended capitation models were healthier and wealthier than FFS and enhanced-FFS patients. Primary care and total health care costs were significantly different across Ontario primary care models. Using the traditional FFS as the reference, we found that patients in the enhanced-FFS models had the lowest total health care costs, and also the lowest primary care costs. Patients in the blended capitation models had higher primary care costs but lower total health care costs. Patients that were in multidisciplinary teams (FHT), where physicians are also paid on a blended capitation basis, had higher total health care costs than non-FHT patients but still lower than the FFS reference group. Primary care and total health care costs increased with patients' age, morbidity, and lower income quintile across all primary care payment types. The new primary care models were associated with lower total health care costs for patients compared to the

  20. An Integrated Assessment Model for Helping the United States Sea Scallop (Placopecten magellanicus) Fishery Plan Ahead for Ocean Acidification and Warming.

    Science.gov (United States)

    Cooley, Sarah R; Rheuban, Jennie E; Hart, Deborah R; Luu, Victoria; Glover, David M; Hare, Jonathan A; Doney, Scott C

    2015-01-01

    Ocean acidification, the progressive change in ocean chemistry caused by uptake of atmospheric CO2, is likely to affect some marine resources negatively, including shellfish. The Atlantic sea scallop (Placopecten magellanicus) supports one of the most economically important single-species commercial fisheries in the United States. Careful management appears to be the most powerful short-term factor affecting scallop populations, but in the coming decades scallops will be increasingly influenced by global environmental changes such as ocean warming and ocean acidification. In this paper, we describe an integrated assessment model (IAM) that numerically simulates oceanographic, population dynamic, and socioeconomic relationships for the U.S. commercial sea scallop fishery. Our primary goal is to enrich resource management deliberations by offering both short- and long-term insight into the system and generating detailed policy-relevant information about the relative effects of ocean acidification, temperature rise, fishing pressure, and socioeconomic factors on the fishery using a simplified model system. Starting with relationships and data used now for sea scallop fishery management, the model adds socioeconomic decision making based on static economic theory and includes ocean biogeochemical change resulting from CO2 emissions. The model skillfully reproduces scallop population dynamics, market dynamics, and seawater carbonate chemistry since 2000. It indicates sea scallop harvests could decline substantially by 2050 under RCP 8.5 CO2 emissions and current harvest rules, assuming that ocean acidification affects P. magellanicus by decreasing recruitment and slowing growth, and that ocean warming increases growth. Future work will explore different economic and management scenarios and test how potential impacts of ocean acidification on other scallop biological parameters may influence the social-ecological system. Future empirical work on the effect of ocean

  1. US GODAE: Global Ocean Prediction with the Hybrid Coordinate Ocean Model (HYCOM)

    Science.gov (United States)

    2009-06-01

    components: OPeNDAP (see article by Cornillon et al., this issue ) and the Live Access Server forecast day 0.6 0.7 0.8 0.9 1.0 m ed ia n SS H a no m al...al. (2008) and an article scheduled for the september 2009 issue of Oceanography for a more detailed discussion of these results. Oceanography Vol.22...example, detailed surface current information derived from HYCOM is summarized by OCENS (Ocean and Coastal ENviromental Sensing, http

  2. NASA Ocean Biogeochemical Model assimilating satellite chlorophyll data global daily VR2017 (NOBM_DAY) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — This is the assimilated daily data from NASA Ocean Biogeochemical Model (NOBM). The NOBM is a comprehensive, interactive ocean biogeochemical model coupled with a...

  3. Assimilation of TOPEX/POSEIDON Altimeter Data into a Global Ocean Circulation Model: Are the Results Any Good?

    Science.gov (United States)

    Fukumori, I.; Fu, L. L.; Chao, Y.

    1998-01-01

    The feasibility of assimilating satellite altimetry data into a global ocean general ocean general circulation model is studied. Three years of TOPEX/POSEIDON data is analyzed using a global, three-dimensional, nonlinear primitive equation model.

  4. NASA Ocean Biogeochemical Model assimilating satellite chlorophyll data global monthly VR2017 (NOBM_MON) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — This is the assimilated monthly data from NASA Ocean Biogeochemical Model (NOBM). The NOBM is a comprehensive, interactive ocean biogeochemical model coupled with a...

  5. The M-2 ocean tide loading wave in Alaska: vertical and horizontal displacements, modelled and observed

    DEFF Research Database (Denmark)

    Khan, Shfaqat Abbas; Scherneck, H.G.

    2003-01-01

    Crustal deformations caused by surface load due to ocean tides are strongly dependent on the surface load closest to the observing site. In order to correctly model this ocean loading effect near irregular coastal areas, a high-resolution coastline is required. A test is carried out using two GPS...

  6. Detection and Modeling of Non-Tidal Oceanic Effects on the Earth's Rotation Rate

    Science.gov (United States)

    Marcus, S. L.; Chao, Y.; Dickey, J. O.; Gegout, P.

    1998-01-01

    Sub-decadal changes in the Earth's rotation rate, and hence in the length-of-day (LOD), are largely controlled by variations in atmospheric angular momentum. Results from two oceanic general circulation models (OGCMs), forced by observed wind stress and heat flux for the years 1992-1994, show that ocean current and mass distribution changes also induce detectable LOD variations.

  7. A new approach to the spin-up problem in ocean-climate models

    NARCIS (Netherlands)

    Bernsen, E.

    2010-01-01

    The spin-up timescale in large-scale ocean models, i.e., the time it takes to reach an equilibrium state, is determined by the slow processes in the deep ocean and is usually in the order of a few thousand years. As these equilibrium states are taken as initial states for many calculations, much

  8. Pellet culture model for human primary osteoblasts

    OpenAIRE

    K Jähn; RG Richards; CW Archer; MJ Stoddart

    2010-01-01

    In vitro monolayer culture of human primary osteoblasts (hOBs) often shows unsatisfactory results for extracellular matrix deposition, maturation and calcification. Nevertheless, monolayer culture is still the method of choice for in vitro differentiation of primary osteoblasts. We believe that the delay in mature ECM production by the monolayer cultured osteoblasts is determined by their state of cell maturation. A functional relationship between the inhibition of osteoblast proliferation an...

  9. Primary Life Stage Boron Isotope and Trace Elements Incorporation in Aposymbiotic Acropora millepora Coral under Ocean Acidification and Warming

    Directory of Open Access Journals (Sweden)

    Henry C. Wu

    2017-05-01

    Full Text Available Early-life stages of reef-building corals are vital to coral existence and reef maintenance. It is therefore crucial to study juvenile coral response to future climate change pressures. Moreover, corals are known to be reliable recorders of environmental conditions in their skeletal materials. Aposymbiotic Acropora millepora larvae were cultured in different seawater temperature (27 and 29°C and pCO2 (390 and 750 μatm conditions to understand the impacts of “end of century” ocean acidification (OA and ocean warming (OW conditions on skeletal morphology and geochemistry. The experimental conditions impacted primary polyp juvenile coral skeletal morphology and growth resulting in asymmetric translucent appearances with brittle skeleton features. The impact of OA resulted in microstructure differences with decreased precipitation or lengthening of fasciculi and disorganized aragonite crystals that led to more concentrations of centers of calcifications. The coral skeletal δ11B composition measured by laser ablation MC-ICP-MS was significantly affected by pCO2 (p = 0.0024 and water temperature (p = 1.46 × 10−5. Reconstructed pH of the primary polyp skeleton using the δ11B proxy suggests a difference in coral calcification site and seawater pH consistent with previously observed coral pH up-regulation. Similarly, trace element results measured by laser ablation ICP-MS indicate the impact of pCO2. Primary polyp juvenile Sr/Ca ratio indicates a bias in reconstructed sea surface temperature (SST under higher pCO2 conditions. Coral microstructure content changes (center of calcification and fasciculi due to OA possibly contributed to the variability in B/Ca ratios. Our results imply that increasing OA and OW may lead to coral acclimation issues and species-specific inaccuracies of the commonly used Sr/Ca-SST proxy.

  10. A 1000-year simulation with the IPSL ocean-atmosphere coupled model

    Directory of Open Access Journals (Sweden)

    S. Conil

    2003-06-01

    Full Text Available A 1000-year climate simulation is run with the ocean-atmosphere coupled model developed at the Institute Pierre- Simon Laplace (IPSL, Paris. No flux adjustment is used. The drift of the model is analyzed in terms of the seasurface temperature and deep ocean temperature. When the model's own equilibrium is reached, it is found that the Antarctic bottom water production experiences large-amplitude variation, oscillating between strong and weak episodes. This can yield oceanic temperature variation in the Southern Hemisphere and for the global mean.

  11. Verification of a coupled atmosphere-ocean model using satellite observations over the Adriatic Sea

    Directory of Open Access Journals (Sweden)

    V. Djurdjevic

    2008-07-01

    Full Text Available Verification of the EBU-POM regional atmosphere-ocean coupled model (RAOCM was carried out using satellite observations of SST and surface winds over the Adriatic Sea. The atmospheric component has a horizontal resolution of 0.125 degree (approximately 10 km and 32 vertical levels, while the ocean component has a horizontal resolution of approximately 4 km with 21 sigma vertical levels.

    Verification of the forecasted SST was performed for 15 forecasts during 2006, each of them seven days long. These forecasts coincide with the operating cycle of the Adriatic Regional Model (AREG, which provided the initial fields and boundary conditions for the ocean component of EBU-POM. Two sources of data were used for the initial and boundary conditions of the atmosphere: primary data were obtained from the European Center for Medium-Range Weather Forecasting (ECMWF, while data from National Centers for Environmental Prediction (NCEP were used to test the sensitivity to boundary conditions.

    Forecast skill was expressed in terms of BIAS and root mean square error (RMSE. During most the of verification period, the model had a negative BIAS of approximately −0.3°, while RMSE varied between 1.1° and 1.2°. Interestingly, these errors did not increase over time, which means that the forecast skill did not decline during the integrations.

    The 10-m wind verification was conducted for one period of 17 days in February 2007, during a strong bora episode, for which satellite estimates of surface winds were available. During the same period, SST measurements were conducted twice a day, which enabled us to verify diurnal variations of SST simulated by the RAOCM model. Since ECMWF's deterministic forecasts do not cover such a long period, we decided to use the ECMWF analysis, i.e. we ran the model in hindcast mode. The winds simulated in this analysis were weaker than the satellite estimates, with a mean BIAS of −0.8 m/s.

  12. Verification of a coupled atmosphere-ocean model using satellite observations over the Adriatic Sea

    Directory of Open Access Journals (Sweden)

    V. Djurdjevic

    2008-07-01

    Full Text Available Verification of the EBU-POM regional atmosphere-ocean coupled model (RAOCM was carried out using satellite observations of SST and surface winds over the Adriatic Sea. The atmospheric component has a horizontal resolution of 0.125 degree (approximately 10 km and 32 vertical levels, while the ocean component has a horizontal resolution of approximately 4 km with 21 sigma vertical levels. Verification of the forecasted SST was performed for 15 forecasts during 2006, each of them seven days long. These forecasts coincide with the operating cycle of the Adriatic Regional Model (AREG, which provided the initial fields and boundary conditions for the ocean component of EBU-POM. Two sources of data were used for the initial and boundary conditions of the atmosphere: primary data were obtained from the European Center for Medium-Range Weather Forecasting (ECMWF, while data from National Centers for Environmental Prediction (NCEP were used to test the sensitivity to boundary conditions. Forecast skill was expressed in terms of BIAS and root mean square error (RMSE. During most the of verification period, the model had a negative BIAS of approximately −0.3°, while RMSE varied between 1.1° and 1.2°. Interestingly, these errors did not increase over time, which means that the forecast skill did not decline during the integrations. The 10-m wind verification was conducted for one period of 17 days in February 2007, during a strong bora episode, for which satellite estimates of surface winds were available. During the same period, SST measurements were conducted twice a day, which enabled us to verify diurnal variations of SST simulated by the RAOCM model. Since ECMWF's deterministic forecasts do not cover such a long period, we decided to use the ECMWF analysis, i.e. we ran the model in hindcast mode. The winds simulated in this analysis were weaker than the satellite estimates, with a mean BIAS of −0.8 m/s.

  13. Glacial-interglacial variability in ocean oxygen and phosphorus in a global biogeochemical model

    Directory of Open Access Journals (Sweden)

    V Palastanga

    2013-02-01

    Full Text Available Increased transfer of particulate matter from continental shelves to the open ocean during glacials may have had a major impact on the biogeochemistry of the ocean. Here, we assess the response of the coupled oceanic cycles of oxygen, carbon, phosphorus, and iron to the input of particulate organic carbon and reactive phosphorus from shelves. We use a biogeochemical ocean model and specifically focus on the Last Glacial Maximum (LGM. When compared to an interglacial reference run, our glacial scenario with shelf input shows major increases in ocean productivity and phosphorus burial, while mean deep-water oxygen concentrations decline. There is a downward expansion of the oxygen minimum zones (OMZs in the Atlantic and Indian Ocean, while the extension of the OMZ in the Pacific is slightly reduced. Oxygen concentrations below 2000 m also decline but bottom waters do not become anoxic. The model simulations show when shelf input of particulate organic matter and particulate reactive P is considered, low oxygen areas in the glacial ocean expand, but concentrations are not low enough to generate wide scale changes in sediment biogeochemistry and sedimentary phosphorus recycling. Increased reactive phosphorus burial in the open ocean during the LGM in the model is related to dust input, notably over the southwest Atlantic and northwest Pacific, whereas input of material from shelves explains higher burial fluxes in continental slope and rise regions. Our model results are in qualitative agreement with available data and reproduce the strong spatial differences in the response of phosphorus burial to glacial-interglacial change. Our model results also highlight the need for additional sediment core records from all ocean basins to allow further insight into changes in phosphorus, carbon and oxygen dynamics in the ocean on glacial-interglacial timescales.

  14. Interannual Variability of Southern Ocean Diatom Production in a Model With Flexible Si:N:C:Chl Ratios

    Science.gov (United States)

    Voelker, C. D.; Hohn, S.; Losch, M.; Losa, S.; Wolf-Gladrow, D. A.

    2008-12-01

    The requirements of phytoplankton for nutrients strongly couple the fluxes of different biologically important elements, such as carbon, nitrogen, silicon and iron. In the Southern Ocean this coupling manifests itself in iron limitation controlling the primary production, but also influencing the Si:N-ratio of nutrient drawdown and biomass export. We investigate the interaction between nutrient inputs, biomass composition and the biological pump in the Southern Ocean with the help of a global biogeochemical model that allows for physiological variations of the Our model results agree with observations of enhanced Si:N drawdown ratios around Antarctica and show a belt of strong vertical flux of biogenic Si over the location of the 'opal belt' in the sediment. In the model, the export of BSi around Antarctica is increased through high Si:C ratios in phytoplankton caused by iron limitation. Integration of the model forced by meteorological reanalysis fields leads to interannual variability of sea ice extent, nutrient upwelling and sea surface temperature. We investigate the consequences of this variability for the biological pump in different regions of the Southern Ocean, comparing the model with JGOFS data, and analyse the role of stoichiometric variations.

  15. Green sturgeon distribution in the Pacific Ocean estimated from modeled oceanographic features and migration behavior.

    Directory of Open Access Journals (Sweden)

    David D Huff

    Full Text Available The green sturgeon (Acipenser medirostris, which is found in the eastern Pacific Ocean from Baja California to the Bering Sea, tends to be highly migratory, moving long distances among estuaries, spawning rivers, and distant coastal regions. Factors that determine the oceanic distribution of green sturgeon are unclear, but broad-scale physical conditions interacting with migration behavior may play an important role. We estimated the distribution of green sturgeon by modeling species-environment relationships using oceanographic and migration behavior covariates with maximum entropy modeling (MaxEnt of species geographic distributions. The primary concentration of green sturgeon was estimated from approximately 41-51.5° N latitude in the coastal waters of Washington, Oregon, and Vancouver Island and in the vicinity of San Francisco and Monterey Bays from 36-37° N latitude. Unsuitably cold water temperatures in the far north and energetic efficiencies associated with prevailing water currents may provide the best explanation for the range-wide marine distribution of green sturgeon. Independent trawl records, fisheries observer records, and tagging studies corroborated our findings. However, our model also delineated patchily distributed habitat south of Monterey Bay, though there are few records of green sturgeon from this region. Green sturgeon are likely influenced by countervailing pressures governing their dispersal. They are behaviorally directed to revisit natal freshwater spawning rivers and persistent overwintering grounds in coastal marine habitats, yet they are likely physiologically bounded by abiotic and biotic environmental features. Impacts of human activities on green sturgeon or their habitat in coastal waters, such as bottom-disturbing trawl fisheries, may be minimized through marine spatial planning that makes use of high-quality species distribution information.

  16. Geophysical Global Modeling for Extreme Crop Production Using Photosynthesis Models Coupled to Ocean SST Dipoles

    Science.gov (United States)

    Kaneko, D.

    2016-12-01

    Climate change appears to have manifested itself along with abnormal meteorological disasters. Instability caused by drought and flood disasters is producing poor harvests because of poor photosynthesis and pollination. Fluctuations of extreme phenomena are increasing rapidly because amplitudes of change are much greater than average trends. A fundamental cause of these phenomena derives from increased stored energy inside ocean waters. Geophysical and biochemical modeling of crop production can elucidate complex mechanisms under seasonal climate anomalies. The models have progressed through their combination with global climate reanalysis, environmental satellite data, and harvest data on the ground. This study examined adaptation of crop production to advancing abnormal phenomena related to global climate change. Global environmental surface conditions, i.e., vegetation, surface air temperature, and sea surface temperature observed by satellites, enable global modeling of crop production and monitoring. Basic streams of the concepts of modeling rely upon continental energy flow and carbon circulation among crop vegetation, land surface atmosphere combining energy advection from ocean surface anomalies. Global environmental surface conditions, e.g., vegetation, surface air temperature, and sea surface temperature observed by satellites, enable global modeling of crop production and monitoring. The method of validating the modeling relies upon carbon partitioning in biomass and grains through carbon flow by photosynthesis using carbon dioxide unit in photosynthesis. Results of computations done for this study show global distributions of actual evaporation, stomata opening, and photosynthesis, presenting mechanisms related to advection effects from SST anomalies in the Pacific, Atlantic, and Indian oceans on global and continental croplands. For North America, climate effects appear clearly in severe atmospheric phenomena, which have caused drought and forest fires

  17. Application of a Topological Metric for Assessing Numerical Ocean Models with Satellite Observations

    Science.gov (United States)

    Morey, S. L.; Dukhovskoy, D. S.; Hiester, H. R.; Garcia-Pineda, O. G.; MacDonald, I. R.

    2015-12-01

    Satellite-based sensors provide a vast amount of observational data over the world ocean. Active microwave radars measure changes in sea surface height and backscattering from surface waves. Data from passive radiometers sensing emissions in multiple spectral bands can directly measure surface temperature, be combined with other data sources to estimate salinity, or processed to derive estimates of optically significant quantities, such as concentrations of biochemical properties. Estimates of the hydrographic variables can be readily used for assimilation or assessment of hydrodynamic ocean models. Optical data, however, have been underutilized in ocean circulation modeling. Qualitative assessments of oceanic fronts and other features commonly associated with changes in optically significant quantities are often made through visual comparison. This project applies a topological approach, borrowed from the field of computer image recognition, to quantitatively evaluate ocean model simulations of features that are related to quantities inferred from satellite imagery. The Modified Hausdorff Distance (MHD) provides a measure of the similarity of two shapes. Examples of applications of the MHD to assess ocean circulation models are presented. The first application assesses several models' representation of the freshwater plume structure from the Mississippi River, which is associated with a significant expression of color, using a satellite-derived ocean color index. Even though the variables being compared (salinity and ocean color index) differ, the MHD allows contours of the fields to be compared topologically. The second application assesses simulations of surface oil transport driven by winds and ocean model currents using surface oil maps derived from synthetic aperture radar backscatter data. In this case, maps of time composited oil coverage are compared between the simulations and satellite observations.

  18. Development of wavelet-ANN models to predict water quality parameters in Hilo Bay, Pacific Ocean.

    Science.gov (United States)

    Alizadeh, Mohamad Javad; Kavianpour, Mohamad Reza

    2015-09-15

    The main objective of this study is to apply artificial neural network (ANN) and wavelet-neural network (WNN) models for predicting a variety of ocean water quality parameters. In this regard, several water quality parameters in Hilo Bay, Pacific Ocean, are taken under consideration. Different combinations of water quality parameters are applied as input variables to predict daily values of salinity, temperature and DO as well as hourly values of DO. The results demonstrate that the WNN models are superior to the ANN models. Also, the hourly models developed for DO prediction outperform the daily models of DO. For the daily models, the most accurate model has R equal to 0.96, while for the hourly model it reaches up to 0.98. Overall, the results show the ability of the model to monitor the ocean parameters, in condition with missing data, or when regular measurement and monitoring are impossible. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Variability in the mechanisms controlling Southern Ocean phytoplankton bloom phenology in an ocean model and satellite observations

    Science.gov (United States)

    Rohr, Tyler; Long, Matthew C.; Kavanaugh, Maria T.; Lindsay, Keith; Doney, Scott C.

    2017-05-01

    A coupled global numerical simulation (conducted with the Community Earth System Model) is used in conjunction with satellite remote sensing observations to examine the role of top-down (grazing pressure) and bottom-up (light, nutrients) controls on marine phytoplankton bloom dynamics in the Southern Ocean. Phytoplankton seasonal phenology is evaluated in the context of the recently proposed "disturbance-recovery" hypothesis relative to more traditional, exclusively "bottom-up" frameworks. All blooms occur when phytoplankton division rates exceed loss rates to permit sustained net population growth; however, the nature of this decoupling period varies regionally in Community Earth System Model. Regional case studies illustrate how unique pathways allow blooms to emerge despite very poor division rates or very strong grazing rates. In the Subantarctic, southeast Pacific small spring blooms initiate early cooccurring with deep mixing and low division rates, consistent with the disturbance-recovery hypothesis. Similar systematics are present in the Subantarctic, southwest Atlantic during the spring but are eclipsed by a subsequent, larger summer bloom that is coincident with shallow mixing and the annual maximum in division rates, consistent with a bottom-up, light limited framework. In the model simulation, increased iron stress prevents a similar summer bloom in the southeast Pacific. In the simulated Antarctic zone (70°S-65°S) seasonal sea ice acts as a dominant phytoplankton-zooplankton decoupling agent, triggering a delayed but substantial bloom as ice recedes. Satellite ocean color remote sensing and ocean physical reanalysis products do not precisely match model-predicted phenology, but observed patterns do indicate regional variability in mechanism across the Atlantic and Pacific.

  20. A Participatory Model of the Paradox of Primary Care

    Science.gov (United States)

    Homa, Laura; Rose, Johnie; Hovmand, Peter S.; Cherng, Sarah T.; Riolo, Rick L.; Kraus, Alison; Biswas, Anindita; Burgess, Kelly; Aungst, Heide; Stange, Kurt C.; Brown, Kalanthe; Brooks-Terry, Margaret; Dec, Ellen; Jackson, Brigid; Gilliam, Jules; Kikano, George E.; Reichsman, Ann; Schaadt, Debbie; Hilfer, Jamie; Ticknor, Christine; Tyler, Carl V.; Van der Meulen, Anna; Ways, Heather; Weinberger, Richard F.; Williams, Christine

    2015-01-01

    PURPOSE The paradox of primary care is the observation that primary care is associated with apparently low levels of evidence-based care for individual diseases, but systems based on primary care have healthier populations, use fewer resources, and have less health inequality. The purpose of this article is to explore, from a complex systems perspective, mechanisms that might account for the effects of primary care beyond disease-specific care. METHODS In an 8-session, participatory group model-building process, patient, caregiver, and primary care clinician community stakeholders worked with academic investigators to develop and refine an agent-based computer simulation model to test hypotheses about mechanisms by which features of primary care could affect health and health equity. RESULTS In the resulting model, patients are at risk for acute illness, acute life-changing illness, chronic illness, and mental illness. Patients have changeable health behaviors and care-seeking tendencies that relate to their living in advantaged or disadvantaged neighborhoods. There are 2 types of care available to patients: primary and specialty. Primary care in the model is less effective than specialty care in treating single diseases, but it has the ability to treat multiple diseases at once. Primary care also can provide disease prevention visits, help patients improve their health behaviors, refer to specialty care, and develop relationships with patients that cause them to lower their threshold for seeking care. In a model run with primary care features turned off, primary care patients have poorer health. In a model run with all primary care features turned on, their conjoint effect leads to better population health for patients who seek primary care, with the primary care effect being particularly pronounced for patients who are disadvantaged and patients with multiple chronic conditions. Primary care leads to more total health care visits that are due to more disease

  1. Multi-model attribution of upper-ocean temperature changes using an isothermal approach

    Science.gov (United States)

    Weller, Evan; Min, Seung-Ki; Palmer, Matthew D.; Lee, Donghyun; Yim, Bo Young; Yeh, Sang-Wook

    2016-06-01

    Both air-sea heat exchanges and changes in ocean advection have contributed to observed upper-ocean warming most evident in the late-twentieth century. However, it is predominantly via changes in air-sea heat fluxes that human-induced climate forcings, such as increasing greenhouse gases, and other natural factors such as volcanic aerosols, have influenced global ocean heat content. The present study builds on previous work using two different indicators of upper-ocean temperature changes for the detection of both anthropogenic and natural external climate forcings. Using simulations from phase 5 of the Coupled Model Intercomparison Project, we compare mean temperatures above a fixed isotherm with the more widely adopted approach of using a fixed depth. We present the first multi-model ensemble detection and attribution analysis using the fixed isotherm approach to robustly detect both anthropogenic and natural external influences on upper-ocean temperatures. Although contributions from multidecadal natural variability cannot be fully removed, both the large multi-model ensemble size and properties of the isotherm analysis reduce internal variability of the ocean, resulting in better observation-model comparison of temperature changes since the 1950s. We further show that the high temporal resolution afforded by the isotherm analysis is required to detect natural external influences such as volcanic cooling events in the upper-ocean because the radiative effect of volcanic forcings is short-lived.

  2. On usage of CABARET scheme for tracer transport in INM ocean model

    International Nuclear Information System (INIS)

    Diansky, Nikolay; Kostrykin, Sergey; Gusev, Anatoly; Salnikov, Nikolay

    2010-01-01

    The contemporary state of ocean numerical modelling sets some requirements for the numerical advection schemes used in ocean general circulation models (OGCMs). The most important requirements are conservation, monotonicity and numerical efficiency including good parallelization properties. Investigation of some advection schemes shows that one of the best schemes satisfying the criteria is CABARET scheme. 3D-modification of the CABARET scheme was used to develop a new transport module (for temperature and salinity) for the Institute of Numerical Mathematics ocean model (INMOM). Testing of this module on some common benchmarks shows a high accuracy in comparison with the second-order advection scheme used in the INMOM. This new module was incorporated in the INMOM and experiments with the modified model showed a better simulation of oceanic circulation than its previous version.

  3. North Pacific Acoustic Laboratory: Analysis of Shadow Zone Arrivals and Acoustic Propagation in Numerical Ocean Models

    National Research Council Canada - National Science Library

    Dushaw, Brian

    2009-01-01

    ... depth of the receiver lies well below the depths of the predicted cusps. Several models for the temperature and salinity in the North Pacific Ocean were obtained and processed to enable simulations of acoustic propagation for comparison to the observations...

  4. Shore-based Path Planning for Marine Vehicles Using a Model of Ocean Currents

    Data.gov (United States)

    National Aeronautics and Space Administration — Develop path planning methods that incorporate an approximate model of ocean currents in path planning for a range of autonomous marine vehicles such as surface...

  5. A multi-level adaptation model of circulation for the western Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Shaji, C.; Bahulayan, N.; Dube, S.K.; Rao, A.D.

    on the observed circulation in the western tropical Indian Ocean. The model consists of equations of motion and continuity, sea surface topography, equations of state and temperature, and salinity diffusion equations. While the sea surface topography equation...

  6. Formulation, Implementation and Examination of Vertical Coordinate Choices in the Global Navy Coastal Ocean Model (NCOM)

    National Research Council Canada - National Science Library

    Barron, Charlie N; Kara, A. B; Martin, Paul J; Rhodes, Robert C; Smedstad, Lucy F

    2006-01-01

    .... NCOM is a baroclinic, hydrostatic, Boussinesq, free-surface ocean model that allows its vertical coordinate to consist of sigma coordinates for the upper layers and z-levels below a user-specified depth...

  7. Various approaches to the modelling of large scale 3-dimensional circulation in the Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Shaji, C.; Bahulayan, N.; Rao, A.D.; Dube, S.K.

    In this paper, the three different approaches to the modelling of large scale 3-dimensional flow in the ocean such as the diagnostic, semi-diagnostic (adaptation) and the prognostic are discussed in detail. Three-dimensional solutions are obtained...

  8. Assessing GOCE Gravity Models using Altimetry and In-situ Ocean Current Observation

    DEFF Research Database (Denmark)

    Knudsen, Per; Andersen, Ole Baltazar; Honecker, Johanna

    The Gravity and steady state Ocean Circulation Explorer (GOCE) satellite mission measures Earth's gravity field with an unprecedented accuracy at short spatial scales. Previous results have demonstrated a significant advance in our ability to determine the ocean's general circulation. The improved...... gravity models provided by the GOCE mission have enhanced the resolution and sharpened the boundaries of those features and the associated geostrophic surface currents reveal improvements for all of the ocean's current systems. In this study, a series of 23 newer gravity models including observations from...

  9. Decadal variability of the Tropical Atlantic Ocean Surface Temperature in shipboard measurements and in a Global Ocean-Atmosphere model

    Science.gov (United States)

    Mehta, Vikram M.; Delworth, Thomas

    1995-01-01

    Sea surface temperature (SST) variability was investigated in a 200-yr integration of a global model of the coupled oceanic and atmospheric general circulations developed at the Geophysical Fluid Dynamics Laboratory (GFDL). The second 100 yr of SST in the coupled model's tropical Atlantic region were analyzed with a variety of techniques. Analyses of SST time series, averaged over approximately the same subregions as the Global Ocean Surface Temperature Atlas (GOSTA) time series, showed that the GFDL SST anomalies also undergo pronounced quasi-oscillatory decadal and multidecadal variability but at somewhat shorter timescales than the GOSTA SST anomalies. Further analyses of the horizontal structures of the decadal timescale variability in the GFDL coupled model showed the existence of two types of variability in general agreement with results of the GOSTA SST time series analyses. One type, characterized by timescales between 8 and 11 yr, has high spatial coherence within each hemisphere but not between the two hemispheres of the tropical Atlantic. A second type, characterized by timescales between 12 and 20 yr, has high spatial coherence between the two hemispheres. The second type of variability is considerably weaker than the first. As in the GOSTA time series, the multidecadal variability in the GFDL SST time series has approximately opposite phases between the tropical North and South Atlantic Oceans. Empirical orthogonal function analyses of the tropical Atlantic SST anomalies revealed a north-south bipolar pattern as the dominant pattern of decadal variability. It is suggested that the bipolar pattern can be interpreted as decadal variability of the interhemispheric gradient of SST anomalies. The decadal and multidecadal timescale variability of the tropical Atlantic SST, both in the actual and in the GFDL model, stands out significantly above the background 'red noise' and is coherent within each of the time series, suggesting that specific sets of

  10. Compact Ocean Models Enable Onboard AUV Autonomy and Decentralized Adaptive Sampling

    Science.gov (United States)

    2013-09-30

    ocean modeling and assimilation system that can be deployed on-board of an underwater vehicle. The developed system estimates a synoptic picture of...Award Number: N00014-10-1-0424 LONG-TERM GOALS Improve synoptic observations and enhance ocean prediction through development of new...ability of mobile agents to respond adaptively by providing them with a synoptic realization of the environment in the form of compact models of the

  11. Oceanic circulation models help to predict global biogeography of pelagic yellow-bellied sea snake.

    Science.gov (United States)

    Brischoux, François; Cotté, Cédric; Lillywhite, Harvey B; Bailleul, Frédéric; Lalire, Maxime; Gaspar, Philippe

    2016-08-01

    It is well recognized that most marine vertebrates, and especially tetrapods, precisely orient and actively move in apparently homogeneous oceanic environments. Here, we investigate the presumptive role of oceanic currents in biogeographic patterns observed in a secondarily marine tetrapod, the yellow-bellied sea snake (Hydrophis [Pelamis] platurus). State-of-the-art world ocean circulation models show how H. platurus, the only pelagic species of sea snake, can potentially exploit oceanic currents to disperse and maintain population mixing between localities that spread over two-thirds of the Earth's circumference. The very close association of these snakes with surface currents seems to provide a highly efficient dispersal mechanism that allowed this species to range extensively and relatively quickly well beyond the central Indo-Pacific area, the centre of origin, abundance and diversity of sea snakes. Our results further suggest that the pan-oceanic population of this species must be extraordinarily large. © 2016 The Author(s).

  12. NAO-ocean circulation interactions in a coupled general circulation model

    Energy Technology Data Exchange (ETDEWEB)

    Bellucci, A. [Centro Euro-Mediterraneo per i Cambiamenti Climatici, Bologna (Italy); Gualdi, S.; Navarra, A. [Centro Euro-Mediterraneo per i Cambiamenti Climatici, Bologna (Italy); Istituto Nazionale di Geofisica e Vulcanologia, Bologna (Italy); Scoccimarro, E. [Istituto Nazionale di Geofisica e Vulcanologia, Bologna (Italy)

    2008-12-15

    The interplay between the North Atlantic Oscillation (NAO) and the large scale ocean circulation is inspected in a twentieth century simulation conducted with a state-of-the-art coupled general circulation model. Significant lead-lag covariance between oceanic and tropospheric variables suggests that the system supports a damped oscillatory mode involving an active ocean-atmosphere coupling, with a typical NAO-like space structure and a 5 years timescale, qualitatively consistent with a mid-latitude delayed oscillator paradigm. The two essential processes governing the oscillation are (1) a negative feedback between ocean gyre circulation and the high latitude SST meridional gradient and (2) a positive feedback between SST and the NAO. The atmospheric NAO pattern appears to have a weaker projection on the ocean meridional overturning, compared to the gyre circulation, which leads to a secondary role for the thermohaline circulation in driving the meridional heat transport, and thus the oscillatory mode. (orig.)

  13. A survey of models for the prediction of ambient ocean noise: Circa 1995

    Energy Technology Data Exchange (ETDEWEB)

    Doolittle, R.

    1996-01-01

    The state of the art of model development for application to computer studies of undersea search systems utilizing acoustics is surveyed in this document. Due to the demands for surveillance of submarines operating in ocean basins, the development of noise models for application in deep oceans is fairly advanced and somewhat generic. This is due to the deep sound channel, discovered during World War II, which when present allows for long-range sound propagation with little or no interaction with the bottom. Exceptions to this channel, also well understood, are found in both the high latitudes where the sound is upward refracting and in tropical ocean areas with downward refracting sound transmission. The controlling parameter is the sound speed as a function of depth within the ocean, the sound speed profile. When independent of range, this profile may be converted to a noise-versus-depth profile with well-validated consequences for deep-ocean ambient noise. When considering ocean areas of shallow water, the littoral regions, the idea of a genenic ocean channel advisedly is abandoned. The locally unique nature of both the noise production mechanisms and of the channel carrying the sound, obviates the generic treatment. Nevertheless, idealizations of this case exist and promote the understanding if not the exact predictability of the statistics of shallow water ambient noise. Some examples of these models are given in this document.

  14. Trends in Ocean Irradiance using a Radiative Model Forced with Terra Aerosols and Clouds

    Science.gov (United States)

    Gregg, Watson; Casey, Nancy; Romanou, Anastasia

    2010-01-01

    Aerosol and cloud information from MODIS on Terra provide enhanced capability to understand surface irradiance over the oceans and its variability. These relationships can be important for ocean biology and carbon cycles. An established radiative transfer model, the Ocean-Atmosphere Spectral Irradiance Model (OASIM) is used to describe ocean irradiance variability on seasonal to decadal time scales. The model is forced with information on aerosols and clouds from the MODIS sensor on Terra and Aqua. A 7-year record (2000-2006) showed no trends in global ocean surface irradiance or photosynthetic available irradiance (PAR). There were significant (P20 W/sq m. The trends using MODIS data contrast with results from OASIM using liquid water path estimates from the International Satellite Cloud Climatology Project (ISCCP). Here, a global trend of -2 W/sq m was observed, largely dues to a large negative trend in the Antarctic -12 W/sq m. These results suggest the importance of the choice of liquid water path data sets in assessments of medium-length trends in ocean surface irradiance. The choices also impact the evaluation of changes in ocean biogeochemistry.

  15. Ocean-Atmosphere Coupled Model Simulations of Precipitation in the Central Andes

    Science.gov (United States)

    Nicholls, Stephen D.; Mohr, Karen I.

    2015-01-01

    The meridional extent and complex orography of the South American continent contributes to a wide diversity of climate regimes ranging from hyper-arid deserts to tropical rainforests to sub-polar highland regions. In addition, South American meteorology and climate are also made further complicated by ENSO, a powerful coupled ocean-atmosphere phenomenon. Modelling studies in this region have typically resorted to either atmospheric mesoscale or atmosphere-ocean coupled global climate models. The latter offers full physics and high spatial resolution, but it is computationally inefficient typically lack an interactive ocean, whereas the former offers high computational efficiency and ocean-atmosphere coupling, but it lacks adequate spatial and temporal resolution to adequate resolve the complex orography and explicitly simulate precipitation. Explicit simulation of precipitation is vital in the Central Andes where rainfall rates are light (0.5-5 mm hr-1), there is strong seasonality, and most precipitation is associated with weak mesoscale-organized convection. Recent increases in both computational power and model development have led to the advent of coupled ocean-atmosphere mesoscale models for both weather and climate study applications. These modelling systems, while computationally expensive, include two-way ocean-atmosphere coupling, high resolution, and explicit simulation of precipitation. In this study, we use the Coupled Ocean-Atmosphere-Wave-Sediment Transport (COAWST), a fully-coupled mesoscale atmosphere-ocean modeling system. Previous work has shown COAWST to reasonably simulate the entire 2003-2004 wet season (Dec-Feb) as validated against both satellite and model analysis data when ECMWF interim analysis data were used for boundary conditions on a 27-9-km grid configuration (Outer grid extent: 60.4S to 17.7N and 118.6W to 17.4W).

  16. Ocean tide models for satellite geodesy and Earth rotation

    Science.gov (United States)

    Dickman, Steven R.

    1991-01-01

    A theory is presented which predicts tides in turbulent, self-gravitating, and loading oceans possessing linearized bottom friction, realistic bathymetry, and continents (at coastal boundaries no-flow conditions are imposed). The theory is phrased in terms of spherical harmonics, which allows the tide equations to be reduced to linear matrix equations. This approach also allows an ocean-wide mass conservation constraint to be applied. Solutions were obtained for 32 long and short period luni-solar tidal constituents (and the pole tide), including the tidal velocities in addition to the tide height. Calibrating the intensity of bottom friction produces reasonable phase lags for all constituents; however, tidal amplitudes compare well with those from observation and other theories only for long-period constituents. In the most recent stage of grant research, traditional theory (Liouville equations) for determining the effects of angular momentum exchange on Earth's rotation were extended to encompass high-frequency excitations (such as short-period tides).

  17. Validation Test Report for the 1/8 deg Global Navy Coastal Ocean Model Nowcast/Forecast System

    National Research Council Canada - National Science Library

    Barron, Charlie N; Kara, A. B; Rhodes, Robert C; Rowley, Clark; Smedstad, Lucy F

    2007-01-01

    .... Global NCOM supports predictions of ocean currents, temperatures, salinity, sea surface height, and sound speed both directly and by providing initial and boundary conditions for higher-resolution nested ocean models...

  18. A data assimilating model for estimating Southern Ocean biogeochemistry

    Science.gov (United States)

    Verdy, A.; Mazloff, M. R.

    2017-09-01

    A Biogeochemical Southern Ocean State Estimate (B-SOSE) is introduced that includes carbon and oxygen fields as well as nutrient cycles. The state estimate is constrained with observations while maintaining closed budgets and obeying dynamical and thermodynamic balances. Observations from profiling floats, shipboard data, underway measurements, and satellites are used for assimilation. The years 2008-2012 are chosen due to the relative abundance of oxygen observations from Argo floats during this time. The skill of the state estimate at fitting the data is assessed. The agreement is best for fields that are constrained with the most observations, such as surface pCO2 in Drake Passage (44% of the variance captured) and oxygen profiles (over 60% of the variance captured at 200 and 1000 m). The validity of adjoint method optimization for coupled physical-biogeochemical state estimation is demonstrated with a series of gradient check experiments. The method is shown to be mature and ready to synthesize in situ biogeochemical observations as they become more available. Documenting the B-SOSE configuration and diagnosing the strengths and weaknesses of the solution informs usage of this product as both a climate baseline and as a way to test hypotheses. Transport of Intermediate Waters across 32°S supplies significant amounts of nitrate to the Atlantic Ocean (5.57 ± 2.94 Tmol yr-1) and Indian Ocean (5.09 ± 3.06 Tmol yr-1), but much less nitrate reaches the Pacific Ocean (1.78 ± 1.91 Tmol yr-1). Estimates of air-sea carbon dioxide fluxes south of 50°S suggest a mean uptake of 0.18 Pg C/yr for the time period analyzed.

  19. Cloud-radiative effects on implied oceanic energy transport as simulated by atmospheric general circulation models

    Science.gov (United States)

    Gleckler, P. J.; Randall, D. A.; Boer, G.; Colman, R.; Dix, M.; Galin, V.; Helfand, M.; Kiehl, J.; Kitoh, A.; Lau, W.

    1995-01-01

    This paper summarizes the ocean surface net energy flux simulated by fifteen atmospheric general circulation models constrained by realistically-varying sea surface temperatures and sea ice as part of the Atmospheric Model Intercomparison Project. In general, the simulated energy fluxes are within the very large observational uncertainties. However, the annual mean oceanic meridional heat transport that would be required to balance the simulated surface fluxes is shown to be critically sensitive to the radiative effects of clouds, to the extent that even the sign of the Southern Hemisphere ocean heat transport can be affected by the errors in simulated cloud-radiation interactions. It is suggested that improved treatment of cloud radiative effects should help in the development of coupled atmosphere-ocean general circulation models.

  20. Modeling the dynamical sinking of biogenic particles in oceanic flow

    Directory of Open Access Journals (Sweden)

    P. Monroy

    2017-06-01

    Full Text Available We study the problem of sinking particles in a realistic oceanic flow, with major energetic structures in the mesoscale, focussing on the range of particle sizes and densities appropriate for marine biogenic particles. Our aim is to evaluate the relevance of theoretical results of finite size particle dynamics in their applications in the oceanographic context. By using a simplified equation of motion of small particles in a mesoscale simulation of the oceanic velocity field, we estimate the influence of physical processes such as the Coriolis force and the inertia of the particles, and we conclude that they represent negligible corrections to the most important terms, which are passive motion with the velocity of the flow, and a constant added vertical velocity due to gravity. Even if within this approximation three-dimensional clustering of particles can not occur, two-dimensional cuts or projections of the evolving three-dimensional density can display inhomogeneities similar to the ones observed in sinking ocean particles.

  1. The role of biology in planetary evolution: cyanobacterial primary production in low‐oxygen Proterozoic oceans

    Science.gov (United States)

    Bryant, Donald A.; Macalady, Jennifer L.

    2016-01-01

    photosynthesis, including the activity of metabolically versatile cyanobacteria, played an important role in delaying the oxygenation of Earth's surface ocean during the Proterozoic Eon. PMID:26549614

  2. Bioavailable atmospheric phosphorous supply to the global ocean: a 3-D global modeling study

    Science.gov (United States)

    Myriokefalitakis, Stelios; Nenes, Athanasios; Baker, Alex R.; Mihalopoulos, Nikolaos; Kanakidou, Maria

    2016-12-01

    The atmospheric cycle of phosphorus (P) is parameterized here in a state-of-the-art global 3-D chemistry transport model, taking into account primary emissions of total P (TP) and soluble P (DP) associated with mineral dust, combustion particles from natural and anthropogenic sources, bioaerosols, sea spray and volcanic aerosols. For the present day, global TP emissions are calculated to be roughly 1.33 Tg-P yr-1, with the mineral sources contributing more than 80 % to these emissions. The P solubilization from mineral dust under acidic atmospheric conditions is also parameterized in the model and is calculated to contribute about one-third (0.14 Tg-P yr-1) of the global DP atmospheric source. To our knowledge, a unique aspect of our global study is the explicit modeling of the evolution of phosphorus speciation in the atmosphere. The simulated present-day global annual DP deposition flux is 0.45 Tg-P yr-1 (about 40 % over oceans), showing a strong spatial and temporal variability. Present-day simulations of atmospheric P aerosol concentrations and deposition fluxes are satisfactory compared with available observations, indicating however an underestimate of about 70 % on current knowledge of the sources that drive the P atmospheric cycle. Sensitivity simulations using preindustrial (year 1850) anthropogenic and biomass burning emission scenarios showed a present-day increase of 75 % in the P solubilization flux from mineral dust, i.e., the rate at which P is converted into soluble forms, compared to preindustrial times, due to increasing atmospheric acidity over the last 150 years. Future reductions in air pollutants due to the implementation of air-quality regulations are expected to decrease the P solubilization flux from mineral dust by about 30 % in the year 2100 compared to the present day. Considering, however, that all the P contained in bioaerosols is readily available for uptake by marine organisms, and also accounting for all other DP sources, a total

  3. Models for Primary Eye Care Services in India

    Directory of Open Access Journals (Sweden)

    Vasundhra Misra

    2015-01-01

    In the current situation, an integrated health care system with primary eye care promoted by government of India is apparently the best answer. This model is both cost effective and practical for the prevention and control of blindness among the underprivileged population. Other models functioning with the newer technology of tele-ophthalmology or mobile clinics also add to the positive outcome in providing primary eye care services. This review highlights the strengths and weaknesses of various models presently functioning in the country with the idea of providing useful inputs for eye care providers and enabling them to identify and adopt an appropriate model for primary eye care services.

  4. Ocean acidification and rising temperatures may increase biofilm primary productivity but decrease grazer consumption

    Science.gov (United States)

    Russell, Bayden D.; Connell, Sean D.; Findlay, Helen S.; Tait, Karen; Widdicombe, Stephen; Mieszkowska, Nova

    2013-01-01

    Climate change may cause ecosystems to become trophically restructured as a result of primary producers and consumers responding differently to increasing CO2 and temperature. This study used an integrative approach using a controlled microcosm experiment to investigate the combined effects of CO2 and temperature on key components of the intertidal system in the UK, biofilms and their consumers (Littorina littorea). In addition, to identify whether pre-exposure to experimental conditions can alter experimental outcomes we explicitly tested for differential effects on L. littorea pre-exposed to experimental conditions for two weeks and five months. In contrast to predictions based on metabolic theory, the combination of elevated temperature and CO2 over a five-week period caused a decrease in the amount of primary productivity consumed by grazers, while the abundance of biofilms increased. However, long-term pre-exposure to experimental conditions (five months) altered this effect, with grazing rates in these animals being greater than in animals exposed only for two weeks. We suggest that the structure of future ecosystems may not be predictable using short-term laboratory experiments alone owing to potentially confounding effects of exposure time and effects of being held in an artificial environment over prolonged time periods. A combination of laboratory (physiology responses) and large, long-term experiments (ecosystem responses) may therefore be necessary to adequately predict the complex and interactive effects of climate change as organisms may acclimate to conditions over the longer term. PMID:23980241

  5. National Centers for Environmental Prediction (NCEP) Regional Ocean Forecast System (ROFS) model output from 1997-01-01 to 2007-09-05

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Regional Ocean Forecast System (ROFS) was developed jointly by the Ocean Modeling Branch of the National Weather Service's Environmental Modeling Center, the...

  6. Improved Upper Ocean/Sea Ice Modeling in the GISS GCM for Investigating Climate Change

    Science.gov (United States)

    1997-01-01

    This project built on our previous results in which we highlighted the importance of sea ice in overall climate sensitivity by determining that for both warming and cooling climates, when sea ice was not allowed to change, climate sensitivity was reduced by 35-40%. We also modified the Goddard Institute for Space Studies (GISS) 8 deg x lO deg atmospheric General Circulation Model (GCM) to include an upper-ocean/sea-ice model involving the Semtner three-layer ice/snow thermodynamic model, the Price et al. (1986) ocean mixed layer model and a general upper ocean vertical advection/diffusion scheme for maintaining and fluxing properties across the pycnocline. This effort, in addition to improving the sea ice representation in the AGCM, revealed a number of sensitive components of the sea ice/ocean system. For example, the ability to flux heat through the ice/snow properly is critical in order to resolve the surface temperature properly, since small errors in this lead to unrestrained climate drift. The present project, summarized in this report, had as its objectives: (1) introducing a series of sea ice and ocean improvements aimed at overcoming remaining weaknesses in the GCM sea ice/ocean representation, and (2) performing a series of sensitivity experiments designed to evaluate the climate sensitivity of the revised model to both Antarctic and Arctic sea ice, determine the sensitivity of the climate response to initial ice distribution, and investigate the transient response to doubling CO2.

  7. Comparison of three-dimensional ocean general circulation models on a benchmark problem

    International Nuclear Information System (INIS)

    Chartier, M.

    1990-12-01

    A french and an american Ocean General Circulation Models for deep-sea disposal of radioactive wastes are compared on a benchmark test problem. Both models are three-dimensional. They solve the hydrostatic primitive equations of the ocean with two different finite difference techniques. Results show that the dynamics simulated by both models are consistent. Several methods for the running of a model from a known state are tested in the French model: the diagnostic method, the prognostic method, the acceleration of convergence and the robust-diagnostic method

  8. Projections of oceanic N2O emissions in the 21st century using the IPSL Earth system model

    Science.gov (United States)

    Martinez-Rey, J.; Bopp, L.; Gehlen, M.; Tagliabue, A.; Gruber, N.

    2015-07-01

    The ocean is a substantial source of nitrous oxide (N2O) to the atmosphere, but little is known about how this flux might change in the future. Here, we investigate the potential evolution of marine N2O emissions in the 21st century in response to anthropogenic climate change using the global ocean biogeochemical model NEMO-PISCES. Assuming nitrification as the dominant N2O formation pathway, we implemented two different parameterizations of N2O production which differ primarily under low-oxygen (O2) conditions. When forced with output from a climate model simulation run under the business-as-usual high-CO2 concentration scenario (RCP8.5), our simulations suggest a decrease of 4 to 12 % in N2O emissions from 2005 to 2100, i.e., a reduction from 4.03/3.71 to 3.54/3.56 TgN yr-1 depending on the parameterization. The emissions decrease strongly in the western basins of the Pacific and Atlantic oceans, while they tend to increase above the oxygen minimum zones (OMZs), i.e., in the eastern tropical Pacific and in the northern Indian Ocean. The reduction in N2O emissions is caused on the one hand by weakened nitrification as a consequence of reduced primary and export production, and on the other hand by stronger vertical stratification, which reduces the transport of N2O from the ocean interior to the ocean surface. The higher emissions over the OMZ are linked to an expansion of these zones under global warming, which leads to increased N2O production, associated primarily with denitrification. While there are many uncertainties in the relative contribution and changes in the N2O production pathways, the increasing storage seems unequivocal and determines largely the decrease in N2O emissions in the future. From the perspective of a global climate system, the averaged feedback strength associated with the projected decrease in oceanic N2O emissions amounts to around -0.009 W m-2 K-1, which is comparable to the potential increase from terrestrial N2O sources. However

  9. Understanding variability of the Southern Ocean overturning circulation in CORE-II models

    Science.gov (United States)

    Downes, S. M.; Spence, P.; Hogg, A. M.

    2018-03-01

    The current generation of climate models exhibit a large spread in the steady-state and projected Southern Ocean upper and lower overturning circulation, with mechanisms for deep ocean variability remaining less well understood. Here, common Southern Ocean metrics in twelve models from the Coordinated Ocean-ice Reference Experiment Phase II (CORE-II) are assessed over a 60 year period. Specifically, stratification, surface buoyancy fluxes, and eddies are linked to the magnitude of the strengthening trend in the upper overturning circulation, and a decreasing trend in the lower overturning circulation across the CORE-II models. The models evolve similarly in the upper 1 km and the deep ocean, with an almost equivalent poleward intensification trend in the Southern Hemisphere westerly winds. However, the models differ substantially in their eddy parameterisation and surface buoyancy fluxes. In general, models with a larger heat-driven water mass transformation where deep waters upwell at the surface ( ∼ 55°S) transport warmer waters into intermediate depths, thus weakening the stratification in the upper 2 km. Models with a weak eddy induced overturning and a warm bias in the intermediate waters are more likely to exhibit larger increases in the upper overturning circulation, and more significant weakening of the lower overturning circulation. We find the opposite holds for a cool model bias in intermediate depths, combined with a more complex 3D eddy parameterisation that acts to reduce isopycnal slope. In summary, the Southern Ocean overturning circulation decadal trends in the coarse resolution CORE-II models are governed by biases in surface buoyancy fluxes and the ocean density field, and the configuration of the eddy parameterisation.

  10. A model study of the first ventilated regime of the Arctic Ocean during the early Miocene

    Directory of Open Access Journals (Sweden)

    Bijoy Thompson

    2012-07-01

    Full Text Available The tectonic opening of Fram Strait during the Neogene was a significant geological event that transferred the Arctic Ocean from a poorly ventilated enclosed basin, with weak exchange with the North Atlantic, to a fully ventilated “ocean stage”. Previous tectonic and physical oceanographic analyses suggest that the early Miocene Fram Strait was likely several times narrower and less than half as deep as the present-day 400 km wide and 2550 m deep strait. Here we use an ocean general circulation model with a passive age tracer included to further address the effect of the Fram Strait opening on the early Miocene Arctic Ocean circulation. The model tracer age exhibits strong spatial gradient between the two major Arctic Ocean deep basins: the Eurasian and Amerasian basins. There is a two-layer stratification and the exchange flow through Fram Strait shows a bi-layer structure with a low salinity outflow from the Arctic confined to a relatively thin upper layer and a saline inflow from the North Atlantic below. Our study suggests that although Fram Strait was significantly narrower and shallower during early Miocene, and the ventilation mechanism quite different in our model, the estimated ventilation rates are comparable to the chemical tracer estimates in the present-day Arctic Ocean. Since we achieved ventilation of the Arctic Ocean with a prescribed Fram Strait width of 100 km and sill depth of 1000 m, ventilation may have preceded the timing of a full ocean depth connection between the Arctic Ocean and North Atlantic established through seafloor spreading and the development of the Lena Trough.

  11. The role of biology in planetary evolution: cyanobacterial primary production in low-oxygen Proterozoic oceans.

    Science.gov (United States)

    Hamilton, Trinity L; Bryant, Donald A; Macalady, Jennifer L

    2016-02-01

    , including the activity of metabolically versatile cyanobacteria, played an important role in delaying the oxygenation of Earth's surface ocean during the Proterozoic Eon. © 2015 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  12. Global Models of Ridge-Push Force, Geoid, and Lithospheric Strength of Oceanic plates

    Science.gov (United States)

    Mahatsente, Rezene

    2017-12-01

    An understanding of the transmission of ridge-push related stresses in the interior of oceanic plates is important because ridge-push force is one of the principal forces driving plate motion. Here, I assess the transmission of ridge-push related stresses in oceanic plates by comparing the magnitude of the ridge-push force to the integrated strength of oceanic plates. The strength is determined based on plate cooling and rheological models. The strength analysis includes low-temperature plasticity (LTP) in the upper mantle and assumes a range of possible tectonic conditions and rheology in the plates. The ridge-push force has been derived from the thermal state of oceanic lithosphere, seafloor depth and crustal age data. The results of modeling show that the transmission of ridge-push related stresses in oceanic plates mainly depends on rheology and predominant tectonic conditions. If a lithosphere has dry rheology, the estimated strength is higher than the ridge-push force at all ages for compressional tectonics and at old ages (>75 Ma) for extension. Therefore, under such conditions, oceanic plates may not respond to ridge-push force by intraplate deformation. Instead, the plates may transmit the ridge-push related stress in their interior. For a wet rheology, however, the strength of young lithosphere (stress may dissipate in the interior of oceanic plates and diffuses by intraplate deformation. The state of stress within a plate depends on the balance of far-field and intraplate forces.

  13. A revised oceanographic model to calculate the limiting capacity of the ocean to accept radioactive waste

    International Nuclear Information System (INIS)

    Webb, G.A.M.; Grimwood, P.D.

    1976-12-01

    This report describes an oceanographic model which has been developed for the use in calculating the capacity of the oceans to accept radioactive wastes. One component is a relatively short-term diffusion model which is based on that described in an earlier report (Webb et al., NRPB-R14(1973)), but which has been generalised to some extent. Another component is a compartment model which is used to calculate long-term widespread water concentrations. This addition overcomes some of the short comings of the earlier diffusion model. Incorporation of radioactivity into deep ocean sediments is included in this long-term model as a removal mechanism. The combined model is used to provide a conservative (safe) estimate of the maximum concentrations of radioactivity in water as a function of time after the start of a continuous disposal operation. These results can then be used to assess the limiting capacity of an ocean to accept radioactive waste. (author)

  14. An ocean modelling and assimilation guide to using GOCE geoid products

    DEFF Research Database (Denmark)

    Haines, K.; Johannessen, J. A.; Knudsen, Per

    2011-01-01

    We review the procedures and challenges that must be considered when using geoid data derived from the Gravity and steady-state Ocean Circulation Explorer (GOCE) mission in order to constrain the circulation and water mass representation in an ocean general circulation model. It covers...... the compatibility of these different fields in their spatial scale content, their temporal representation, and in their error covariances. These considerations are very important when the resulting data are to be used to estimate ocean circulation and its corresponding errors. We describe the further steps needed...

  15. EFFECTS OF OCEAN TIDE MODELS ON GNSS-ESTIMATED ZTD AND PWV IN TURKEY

    Directory of Open Access Journals (Sweden)

    G. Gurbuz

    2015-12-01

    Full Text Available Global Navigation Satellite System (GNSS observations can precisely estimate the total zenith tropospheric delay (ZTD and precipitable water vapour (PWV for weather prediction and atmospheric research as a continuous and all-weather technique. However, apart from GNSS technique itself, estimations of ZTD and PWV are subject to effects of geophysical models with large uncertainties, particularly imprecise ocean tide models in Turkey. In this paper, GNSS data from Jan. 1st to Dec. 31st of 2014 are processed at 4 co-located GNSS stations (GISM, DIYB, GANM, and ADAN with radiosonde from Turkish Met-Office along with several nearby IGS stations. The GAMIT/GLOBK software has been used to process GNSS data of 30-second sample using the Vienna Mapping Function and 10° elevation cut-off angle. Also tidal and non-tidal atmospheric pressure loadings (ATML at the observation level are also applied in GAMIT/GLOBK. Several widely used ocean tide models are used to evaluate their effects on GNSS-estimated ZTD and PWV estimation, such as IERS recommended FES2004, NAO99b from a barotropic hydrodynamic model, CSR4.0 obtained from TOPEX/Poseidon altimetry with the model FES94.1 as the reference model and GOT00 which is again long wavelength adjustments of FES94.1 using TOPEX/Poseidon data at 0.5 by 0.5 degree grid. The ZTD and PWV computed from radiosonde profile observations are regarded as reference values for the comparison and validation. In the processing phase, five different strategies are taken without ocean tide model and with four aforementioned ocean tide models, respectively, which are used to evaluate ocean tide models effects on GNSS-estimated ZTD and PWV estimation through comparing with co-located Radiosonde. Results showed that ocean tide models have greatly affected the estimation of the ZTD in centimeter level and thus the precipitable water vapour in millimeter level, respectively at stations near coasts. The ocean tide model FES2004 that is

  16. Visible-infrared remote-sensing model and applications for ocean waters. Ph.D. Thesis

    Science.gov (United States)

    Lee, Zhongping

    1994-01-01

    Remote sensing has become important in the ocean sciences, especially for research involving large spatial scales. To estimate the in-water constituents through remote sensing, whether carried out by satellite or airplane, the signal emitted from beneath the sea surface, the so called water-leaving radiance (L(w)), is of prime importance. The magnitude of L(w) depends on two terms: one is the intensity of the solar input, and the other is the reflectance of the in-water constituents. The ratio of the water-leaving radiance to the downwelling irradiance (E(d)) above the sear surface (remote-sensing reflectance, R(sub rs)) is independent of the intensity of the irradiance input, and is largely a function of the optical properties of the in-water constituents. In this work, a model is developed to interpret r(sub rs) for ocean water in the visible-infrared range. In addition to terms for the radiance scattered from molecules and particles, the model includes terms that describe contributions from bottom reflectance, fluorescence of gelbstoff or colored dissolved organic matter (CDOM), and water Raman scattering. By using this model, the measured R(sub rs) of waters from the West Florida Shelf to the Mississippi River plume, which covered a (concentration of chlorophyll a) range of 0.07 - 50 mg/cu m, were well interpreted. The average percentage difference (a.p.d.) between the measured and modeled R(sub rs) is 3.4%, and, for the shallow waters, the model-required water depth is within 10% of the chart depth. Simple mathematical simulations for the phytoplankton pigment absorption coefficient (a(sub theta)) are suggested for using the R(sub rs) model. The inverse problem of R(sub rs), which is to analytically derive the in-water constituents from R(sub rs) data alone, can be solved using the a(sub theta) functions without prior knowledge of the in-water optical properties. More importantly, this method avoids problems associated with a need for knowledge of the shape

  17. The ocean response to volcanic iron fertilisation after the eruption of Kasatochi volcano: a regional-scale biogeochemical ocean model study

    Directory of Open Access Journals (Sweden)

    A. Lindenthal

    2013-06-01

    Full Text Available In high-nutrient–low-chlorophyll regions, phytoplankton growth is limited by the availability of water-soluble iron. The eruption of Kasatochi volcano in August 2008 led to ash deposition into the iron-limited NE Pacific Ocean. Volcanic ash released iron upon contact with seawater and generated a massive phytoplankton bloom. Here we investigate this event with a one-dimensional ocean biogeochemical column model to illuminate the ocean response to iron fertilisation by volcanic ash. The results indicate that the added iron triggered a phytoplankton bloom in the summer of 2008. Associated with this bloom, macronutrient concentrations such as nitrate and silicate decline and zooplankton biomass is enhanced in the ocean mixed layer. The simulated development of the drawdown of carbon dioxide and increase of pH in surface seawater is in good agreement with available observations. Sensitivity studies with different supply dates of iron to the ocean emphasise the favourable oceanic conditions in the NE Pacific to generate massive phytoplankton blooms in particular during July and August in comparison to other months. By varying the amount of volcanic ash and associated bio-available iron supplied to the ocean, model results demonstrate that the NE Pacific Ocean has higher, but limited capabilities to consume CO2 after iron fertilisation than those observed after the volcanic eruption of Kasatochi.

  18. An Updated Geophysical Model for AMSR-E and SSMIS Brightness Temperature Simulations over Oceans

    Directory of Open Access Journals (Sweden)

    Elizaveta Zabolotskikh

    2014-03-01

    Full Text Available In this study, we considered the geophysical model for microwave brightness temperature (BT simulation for the Atmosphere-Ocean System under non-precipitating conditions. The model is presented as a combination of atmospheric absorption and ocean emission models. We validated this model for two satellite instruments—for Advanced Microwave Sounding Radiometer-Earth Observing System (AMSR-E onboard Aqua satellite and for Special Sensor Microwave Imager/Sounder (SSMIS onboard F16 satellite of Defense Meteorological Satellite Program (DMSP series. We compared simulated BT values with satellite BT measurements for different combinations of various water vapor and oxygen absorption models and wind induced ocean emission models. A dataset of clear sky atmospheric and oceanic parameters, collocated in time and space with satellite measurements, was used for the comparison. We found the best model combination, providing the least root mean square error between calculations and measurements. A single combination of models ensured the best results for all considered radiometric channels. We also obtained the adjustments to simulated BT values, as averaged differences between the model simulations and satellite measurements. These adjustments can be used in any research based on modeling data for removing model/calibration inconsistencies. We demonstrated the application of the model by means of the development of the new algorithm for sea surface wind speed retrieval from AMSR-E data.

  19. The NUMA/NUMO Model for Nonhydrostatic Atmosphere and Ocean Dynamics

    Science.gov (United States)

    Giraldo, F.; Abdi, D. S.; Kopera, M. A.; Mueller, A.

    2016-12-01

    This talk will describe our recent work on developing a framework for constructing nonhydrostatic atmospheric and ocean models. The same code base can use NUMA (the Non hydrostatic Unified Model of the Atmosphere) or NUMO (the Nonhydrostatic Unified Model of the Ocean). NUMA/NUMO is unified in the sense that it uses a unified continuous/discontinuous Galerkin formulation for the spatial discretization and is also unified across the scales of the problem (meso-scale and global scale). In this talk, I will describe the capabilities of this model for solving relevant problems in geophysical fluid dynamics.

  20. A model of mercury cycling and isotopic fractionation in the ocean

    OpenAIRE

    Archer, David E.; Blum, Joel D.

    2018-01-01

    Mercury speciation and isotopic fractionation processes have been incorporated into the HAMOCC offline ocean tracer advection code. The model is fast enough to allow a wide exploration of the sensitivity of the Hg cycle in the oceans, and of human exposure to Hg via monomethyl-Hg incorporation into fish. Vertical particle transport of Hg appears to play a discernable role in setting present-day Hg distributions, which we surmise by the fact that in simulations without particle transport, th...

  1. Adaptive subdomain modeling: A multi-analysis technique for ocean circulation models

    Science.gov (United States)

    Altuntas, Alper; Baugh, John

    2017-07-01

    Many coastal and ocean processes of interest operate over large temporal and geographical scales and require a substantial amount of computational resources, particularly when engineering design and failure scenarios are also considered. This study presents an adaptive multi-analysis technique that improves the efficiency of these computations when multiple alternatives are being simulated. The technique, called adaptive subdomain modeling, concurrently analyzes any number of child domains, with each instance corresponding to a unique design or failure scenario, in addition to a full-scale parent domain providing the boundary conditions for its children. To contain the altered hydrodynamics originating from the modifications, the spatial extent of each child domain is adaptively adjusted during runtime depending on the response of the model. The technique is incorporated in ADCIRC++, a re-implementation of the popular ADCIRC ocean circulation model with an updated software architecture designed to facilitate this adaptive behavior and to utilize concurrent executions of multiple domains. The results of our case studies confirm that the method substantially reduces computational effort while maintaining accuracy.

  2. Effects of Model Resolution and Ocean Mixing on Forced Ice-Ocean Physical and Biogeochemical Simulations Using Global and Regional System Models

    Science.gov (United States)

    Jin, Meibing; Deal, Clara; Maslowski, Wieslaw; Matrai, Patricia; Roberts, Andrew; Osinski, Robert; Lee, Younjoo J.; Frants, Marina; Elliott, Scott; Jeffery, Nicole; Hunke, Elizabeth; Wang, Shanlin

    2018-01-01

    The current coarse-resolution global Community Earth System Model (CESM) can reproduce major and large-scale patterns but is still missing some key biogeochemical features in the Arctic Ocean, e.g., low surface nutrients in the Canada Basin. We incorporated the CESM Version 1 ocean biogeochemical code into the Regional Arctic System Model (RASM) and coupled it with a sea-ice algal module to investigate model limitations. Four ice-ocean hindcast cases are compared with various observations: two in a global 1° (40˜60 km in the Arctic) grid: G1deg and G1deg-OLD with/without new sea-ice processes incorporated; two on RASM's 1/12° (˜9 km) grid R9km and R9km-NB with/without a subgrid scale brine rejection parameterization which improves ocean vertical mixing under sea ice. Higher-resolution and new sea-ice processes contributed to lower model errors in sea-ice extent, ice thickness, and ice algae. In the Bering Sea shelf, only higher resolution contributed to lower model errors in salinity, nitrate (NO3), and chlorophyll-a (Chl-a). In the Arctic Basin, model errors in mixed layer depth (MLD) were reduced 36% by brine rejection parameterization, 20% by new sea-ice processes, and 6% by higher resolution. The NO3 concentration biases were caused by both MLD bias and coarse resolution, because of excessive horizontal mixing of high NO3 from the Chukchi Sea into the Canada Basin in coarse resolution models. R9km showed improvements over G1deg on NO3, but not on Chl-a, likely due to light limitation under snow and ice cover in the Arctic Basin.

  3. Manganese in the west Atlantic Ocean in the context of the first global ocean circulation model of manganese

    NARCIS (Netherlands)

    van Hulten, Marco; Middag, Rob; Dutay, Jean-Claude; de Baar, Hein; Roy-Barman, Matthieu; Gehlen, Marion; Tagliabue, Alessandro; Sterl, Andreas

    2017-01-01

    Dissolved manganese (Mn) is a biologically essential element. Moreover, its oxidised form is involved in removing itself and several other trace elements from ocean waters. Here we report the longest thus far (17 500 km length) full-depth ocean section of dissolved Mn in the west Atlantic Ocean,

  4. Global ocean modeling and rendering techniques based on ellipsoid Rectangular grid mapping

    Science.gov (United States)

    Ma, W.; Wan, G.; Wang, L.; Li, W. J.

    2013-10-01

    Summary: In recent years, with the development of the virtual reality technology and data acquisition technology, people increase the demand of GIS visualization. Especially accounting for occupying 70 percent of global area, and as a based environmental visualization, global ocean visualization is particularly important in some applications. This paper studies the global ocean visualization and modeling techniques under the framework of the WGS84 ellipsoid and achieves a method of rapid global ocean photorealistic rendering. The main research works are as follow: 1. In the height field modeling, with the law of statistical and spectral marine and Phillip wave spectrum, we can produce a single height map which considers the wind farm on the ocean wave magnitude of impact; 2. With ellipsoid rectangular grid mapping relationship, the single height map produced above will be mapped to the ellipsoid repeatedly, and achieve a goal of global ocean height field modeling; 3. With the conversion of screen space coordinate system and the rectangular spatial coordinate system, sampling points can be acquired by the view-dependent ellipsoid; 4. With the introduction of global bathymetric data, and came through the GPU for rapid sampling, so that we can get sampling points related to transparency and depth values to achieve a global ocean and land border processing.

  5. Impact of Intrathermocline eddies on seamount and oceanic island off Central Chile: Observation and modeling

    Science.gov (United States)

    Hormazabal, Samuel; Morales, Carmen; Cornejo, Marcela; Bento, Joaquim; Valencia, Luis; Auger, Pierre; Rodriguez, Angel; Correa, Marco; Anabalón, Valeria; Silva, Nelson

    2016-04-01

    In the Southeast Pacific, oceanographic processes that sustain the biological production necessary to maintain the ecosystems associated to seamounts and oceanic islands are still poorly understood. Recent studies suggest that the interaction of mesoscale and submesoescale eddies with oceanic islands and seamounts could be playing an important role in the time-space variability of primary production. In this work, research cruises, satellite data and Regional Ocean Modeling System (ROMS) results have been used to describe the main characteristics of intrathermocline eddies (ITE) and their impact on the Juan Fernández archipelago (JFA), off central Chile. The JFA is located off the coast of central Chile (33°S), and is composed of three main islands: Robinson Crusoe (RC), Alejandro Selkirk (AS) and Santa Clara (SC). Between the RC and AS are located the westernmost seamounts (JF6 and JF5) of the Juan Fernández archipelago. Satellite altimetry data (sea surface height from AVISO) were used to detect and track mesoscale eddies through eddy-tracking algorithm. Physical, chemical and biological parameters as temperature, salinity, dissolved oxygen and fluorescence were measured in the water column at JF5 and JF6, and along the coast off central Chile (30-40°S). Results from the research cruise exhibit the interaction between an ITE and the seamount JF6. Eddy-tracking results showed that the ITE observed at the JF6 was formed at the coast off central-southern Chile, traveled ~900 km seaward and after ~9 months reached the JF5 and JF6 region. Observations along the Chilean coast confirmed that the coast corresponds to the formation area of the observed ITE. In this region, ITEs are represented by subsurface lenses (~100 km diameter; 400 m thickness) of homogeneous salinity, nutrient rich and oxygen-poor equatorial subsurface water mass (ESSW) which is transported poleward by the Peru-Chile undercurrent in the coastal band and seaward by ITEs. The effect of ITEs on the

  6. Adaptation of a fully-unstructured-mesh, finite-element ocean model to the simulation of ocean circulation in the presence of ice shelf

    Science.gov (United States)

    Kimura, Satoshi; Candy, Adam; Holland, Paul; Piggott, Matthew; Jenkins, Adrian

    2013-04-01

    There have been many efforts to explicitly represent ice shelf cavities in ocean models. These ocean models employ isopycnic, terrain-following, or z coordinates. We will explore an alternate method by using the finite-element ocean model, Fluidity-ICOM, to represent an ice shelf. The Fluidity-ICOM model simulates non-hydrostatic dynamics on meshes that can be unstructured in all three dimensions. This geometric flexibility offers several advantages over previous approaches. The model represents melting or freezing on ice-ocean interfaces oriented in any direction, treats the ice shelf topography as continuous rather than stepped, and does not require any smoothing of the ice topography or any additional parameterisations of the ocean mixed layer used in isopycnal or z-coordinate models. We will demonstrate these capabilities by investigating the response of ice shelf basal melting to 1) variations in ocean temperature on an idealized ice shelf and 2) variation in sub-glacial discharge on an idealized Fjord. Melting near the grounding line of the ice shelf produces melt water that is lighter than the surrounding and therefore the meltwater ascends along the base. A band of melting area is concentrated at the Western region due to the Coriolis force in the Southern Hemisphere. As found in previous studies, the melt rate increases non-linearly as the temperature of the water forcing the cavity increases. However, the model is able to represent the dynamics of a meltwater plume that separates from the ice shelf when it reaches neutral buoyancy, unlike previous models with mixed-layer parameterisation. In the warmest case, the meltwater is lighter than the surrounding water, thereby warming the surface of the ocean. As the deep water temperature decreases, the meltwater is not light enough to penetrate to the surface, so it intrudes into the open ocean, cooling the deep water. In the case of the idealized Fjord, the discharged water ascends along the vertical ice base

  7. The Fate and Fortune of the River Mersey Plume: Using Ocean gliders to validate and improve coupled coastal ocean models.

    Science.gov (United States)

    Palmer, M.; O'Neill, C.; Spingys, C.; Mahaffey, C.; Polton, J.

    2012-04-01

    The River Mersey is the major source of freshwater into the Liverpool Bay region of the Irish Sea. The region has been described as a region of freshwater influence (ROFI) since the dominant control on vertical stratification is local gradients in salinity. The River Mersey is fed by tributaries covering a wide variety of land uses, including heavily populated areas, arable and livestock farming, heavy industry and chemical processing plants, finally passing through the city of Liverpool. Understanding the fate of freshwater within this system is therefore vital not only to understand the physical structure of the coastal ocean but also to identify biogeochemical, pathogen and pollutant pathways. In this paper we combine data from the Liverpool Bay Coastal Observatory (cobs.pol.ac.uk) with data from a novel deployment of an ocean glider (Slocum) which was used to track the River Mersey plume over a three week period in February 2011. Glider data was successfully collected in water as shallow as 15m and provided high temporal and spatial resolution physical and biogeochemical data. This allows identification of the development and evolution of the physical structure of the plume and the biological response to nutrient rich Mersey water as it enters the coastal system. Glider and observatory data are used to test and improve the capabilities of coupled POLCOMS (3-D hydrodynamics) and ERSEM (ecosystem) models in reproducing the observed plume behavior.

  8. Intraseasonal variability of upper-ocean currents and photosynthetic primary production along the U.S. west coast associated with the Madden-Julian Oscillation

    Science.gov (United States)

    Barrett, B.; Davies, A. R.; Steppe, C. N.; Hackbarth, C.

    2017-12-01

    In the first part of this study, time-lagged composites of upper-ocean currents from February to May of 1993-2016 were binned by active phase of the leading atmospheric mode of intraseasonal variability, the Madden-Julian Oscillation (MJO). Seven days after the convectively active phase of the MJO enters the tropical Indian Ocean, anomalously strong south-southeastward upper-ocean currents are observed along the majority of U.S. west coast. Seven days after the convectively active phase enters the tropical western Pacific Ocean, upper-ocean current anomalies reverse along the U.S. west coast, with weaker southward flow. A physical pathway to the ocean was found for both of these: (a) tropical MJO convection modulates upper-tropospheric heights and circulation over the Pacific Ocean; (b) those anomalous atmospheric heights adjust the strength and position of the Aleutian Low and Hawaiian High; (c) surface winds change in response to the adjusted atmospheric pressure patterns; and (d) those surface winds project onto upper-ocean currents. In the second part of this study, we investigated if the MJO modulated intraseasonal variability of surface wind forcing and upper-ocean currents projected onto phytoplankton abundance along the U.S. west coast. Following a similar methodology, time-lagged, level 3 chlorophyll-a satellite products (a proxy for photosynthetic primary production) were binned by active MJO phase and analyzed for statistical significance using the Student's t test. Results suggest that intraseasonal variability of biological production along the U.S. west coast may be linked to the MJO, particularly since the time scale of the life cycle of phytoplankton is similar to the time scale of the MJO.

  9. Modeling and Control of Primary Parallel Isolated Boost Converter

    DEFF Research Database (Denmark)

    Mira Albert, Maria del Carmen; Hernandez Botella, Juan Carlos; Sen, Gökhan

    2012-01-01

    In this paper state space modeling and closed loop controlled operation have been presented for primary parallel isolated boost converter (PPIBC) topology as a battery charging unit. Parasitic resistances have been included to have an accurate dynamic model. The accuracy of the model has been...

  10. Modelling the inorganic ocean carbon cycle under past and future climate change

    International Nuclear Information System (INIS)

    Ewan, T.L.

    2004-01-01

    This study used a coupled ocean-atmosphere-sea ice model with an inorganic carbon component to examine the inorganic ocean carbon cycle with particular reference to how climate feedback influences future uptake. In the last 150 years, the increase in atmosphere carbon dioxide (CO 2 ) concentrations have been higher than any time during the Earth's history. Although the oceans are the largest sink for carbon dioxide, it is not know how the ocean carbon cycle will respond to increasing anthropogenic carbon dioxide concentrations in the future. Climate feedbacks could potentially reduce further uptake of carbon by the ocean. In addition to examining past climate transitions, including both abrupt and glacial-interglacial climate transitions, this study also examined the sensitivity of the inorganic carbon cycle to increased atmospheric carbon dioxide. Atmospheric carbon dioxide levels were also projected under a range of global warming scenarios. Most simulations identified a transient weakening of the North Atlantic and increased sea surface temperatures (SST). These positive feedbacks act on the carbon system to reduce uptake. However, the ocean has the capacity to take up 65 to 75 per cent of the anthropogenic carbon dioxide increases. An analysis of climate feedback on future carbon uptake shows that oceans store 7 per cent more carbon when there are no climate feedbacks acting on the system. Sensitivity experiments using the Gent McWilliams parameterization for mixing associated with mesoscale eddies show a further 6 per cent increase in oceanic uptake. Inclusion of sea ice dynamics resulted in a 2 per cent difference in uptake. This study also examined changes in atmospheric carbon dioxide concentration that occur during abrupt climate change events. Changes in ocean circulation and carbon solubility cause significant increases in atmospheric carbon dioxide concentrations when melt water episodes are simulated in both hemispheres. The response of the carbon

  11. Time-dependent greenhouse warming computations with a coupled ocean-atmosphere model

    Science.gov (United States)

    Cubasch, Ulrich; Hasselmann, Klaus; Höck, Heinke; Maier-Reimer, Ernst; Mikolajewicz, Uwe; Santer, Benjamin D.; Sausen, Robert

    1992-12-01

    Climate changes during the next 100 years caused by anthropogenic emissions of greenhouse gases have been simulated for the Intergovernmental Panel on Climate Change Scenarios A (“business as usual”) and D (“accelerated policies”) using a coupled ocean-atmosphere general circulation model. In the global average, the near-surface temperature rises by 2.6 K in Scenario A and by 0.6 K in Scenario D. The global patterns of climate change for both IPCC scenarios and for a third step-function 2 x CO2 experiment were found to be very similar. The warming delay over the oceans is larger than found in simulations with atmospheric general circulation models coupled to mixed-layer models, leading to a more pronounced land-sea contrast and a weaker warming (and in some regions even an initial cooling) in the Southern Ocean. During the first forty years, the global warming and sea level rise due to the thermal expansion of the ocean are significantly slower than estimated previously from box-diffusion-upwelling models, but the major part of this delay can be attributed to the previous warming history prior to the start of present coupled ocean-atmosphere model integration (cold start).

  12. A Statistical Evaluation of Atmosphere-Ocean General Circulation Models: Complexity vs. Simplicity

    OpenAIRE

    Robert K. Kaufmann; David I. Stern

    2004-01-01

    The principal tools used to model future climate change are General Circulation Models which are deterministic high resolution bottom-up models of the global atmosphere-ocean system that require large amounts of supercomputer time to generate results. But are these models a cost-effective way of predicting future climate change at the global level? In this paper we use modern econometric techniques to evaluate the statistical adequacy of three general circulation models (GCMs) by testing thre...

  13. The DTU12MDT global mean dynamic topography and ocean circulation model

    DEFF Research Database (Denmark)

    Knudsen, Per; Andersen, Ole B.

    2013-01-01

    The Gravity and Ocean Circulation Experiment - GOCE satellite mission measure the Earth gravity field with unprecedented accuracy leading to substantial improvements in the modelling of the ocean circulation and transport. In this study of the performance of GOCE, a newer gravity model has been...... to results obtained using pre-GOCE gravity field models. The results of this study show that geostrophic surface currents associated with the mean circulation have been further improved and that currents having speeds down to 5 cm/s have been recovered....

  14. Ocean Chlorophyll as a Precursor of ENSO: An Earth System Modeling Study

    Science.gov (United States)

    Park, Jong-Yeon; Dunne, John P.; Stock, Charles A.

    2018-02-01

    Ocean chlorophyll concentration, a proxy for phytoplankton, is strongly influenced by internal ocean dynamics such as those associated with El Niño-Southern Oscillation (ENSO). Observations show that ocean chlorophyll responses to ENSO generally lead sea surface temperature (SST) responses in the equatorial Pacific. A long-term global Earth system model simulation incorporating marine biogeochemical processes also exhibits a preceding chlorophyll response. In contrast to simulated SST anomalies, which significantly lag the wind-driven subsurface heat response to ENSO, chlorophyll anomalies respond rapidly. Iron was found to be the key factor connecting the simulated surface chlorophyll anomalies to the subsurface ocean response. Westerly wind bursts decrease central Pacific chlorophyll by reducing iron supply through wind-driven thermocline deepening but increase western Pacific chlorophyll by enhancing the influx of coastal iron from the maritime continent. Our results mechanistically support the potential for chlorophyll-based indices to inform seasonal ENSO forecasts beyond previously identified SST-based indices.

  15. Thirty years of progress in applications and modeling of ocean ambient noise

    Science.gov (United States)

    Siderius, Martin; Buckingham, Michael J.

    2012-11-01

    Ambient noise in the ocean is a stochastic process, which traditionally was considered to be a nuisance, since it reduced the detectability of sonar signals of interest. However, over the last thirty years, it has come to be recognized that the ambient noise itself contains useful information about the ocean and ocean processes. To extract the information, various inversion procedures have been developed, based upon which a number of practical applications of the ambient noise have evolved. Since naturally generated ambient noise is always present in the ocean, it has the advantage of being non-invasive and non-damaging to marine life, including marine mammals. In this article, a summary of the commonly encountered ambient noise models is offered, along with the associated inversion procedures, and some of the more recent applications of the ambient noise are highlighted.

  16. The M-2 ocean tide loading wave in Alaska: vertical and horizontal displacements, modelled and observed

    DEFF Research Database (Denmark)

    Khan, Shfaqat Abbas; Scherneck, H.G.

    2003-01-01

    Crustal deformations caused by surface load due to ocean tides are strongly dependent on the surface load closest to the observing site. In order to correctly model this ocean loading effect near irregular coastal areas, a high-resolution coastline is required. A test is carried out using two GPS...... sites located in Alaska, where the ocean tide loading effect is large and consequently observed easily by relative positioning with GPS. The selected sites are Fair (Fairbanks) and Chi3 (located on an island that separates Prince William Sound from the Gulf of Alaska). Processing hourly baseline...... solutions between Fair and Chi3 during a period of 49 days yields a significant ocean tide loading effect. The data is processed using different strategies for the tropospheric delay correction. However, the best results are obtained when we use 1-h ZTD (Zenith Tropospheric Delay) parameters for hourly...

  17. Tropical cyclone sensitivity to ocean coupling in the ECMWF coupled model

    Science.gov (United States)

    Mogensen, Kristian S.; Magnusson, Linus; Bidlot, Jean-Raymond

    2017-05-01

    We present an investigation of the performance of the ECMWF coupled atmosphere-waves-ocean model for different ocean and atmosphere resolutions on a series of tropical cyclones in the Western Pacific with the aim to better understand the coupled feedback mechanisms in these extreme conditions. For some of the test cases, we only find little impact of coupling the atmosphere to the ocean, while in others, we observe a very large impact. To further understand these differences, we have selected two tropical cyclones (TCs) as case studies: TC Haiyan (with small impact of coupling) and TC Neoguri (with large impact of coupling). The comparison between these two cases suggests that the upper ocean stratification is the key in determining the strength of the coupled feedback. A strong coupled feedback is found whenever the ocean heat content of the upper layer is low while a very weak coupled feedback is found whenever the ocean has a thick warm mixed layer. The oceanographic response to tropical cyclones for the two storms has been compared to sea surface temperature and derived surface currents from drifting buoys and to subsurface observations from Argo and ship launched XBT's. These comparisons show that we are able to realistically reproduce the atmospheric and oceanographic interaction during tropical cyclone conditions which gives us confidence that the coupled modeling system is physically sound.

  18. Modelled estimates of spatial variability of iron stress in the Atlantic sector of the Southern Ocean

    Science.gov (United States)

    Ryan-Keogh, Thomas J.; Thomalla, Sandy J.; Mtshali, Thato N.; Little, Hazel

    2017-09-01

    The Atlantic sector of the Southern Ocean is characterized by markedly different frontal zones with specific seasonal and sub-seasonal dynamics. Demonstrated here is the effect of iron on the potential maximum productivity rates of the phytoplankton community. A series of iron addition productivity versus irradiance (PE) experiments utilizing a unique experimental design that allowed for 24 h incubations were performed within the austral summer of 2015/16 to determine the photosynthetic parameters αB, PBmax and Ek. Mean values for each photosynthetic parameter under iron-replete conditions were 1.46 ± 0.55 (µg (µg Chl a)-1 h-1 (µM photons m-2 s-1)-1) for αB, 72.55 ± 27.97 (µg (µg Chl a)-1 h-1) for PBmax and 50.84 ± 11.89 (µM photons m-2 s-1) for Ek, whereas mean values under the control conditions were 1.25 ± 0.92 (µg (µg Chl a)-1 h-1 (µM photons m-2 s-1)-1) for αB, 62.44 ± 36.96 (µg (µg Chl a)-1 h-1) for PBmax and 55.81 ± 19.60 (µM photons m-2 s-1) for Ek. There were no clear spatial patterns in either the absolute values or the absolute differences between the treatments at the experimental locations. When these parameters are integrated into a standard depth-integrated primary production model across a latitudinal transect, the effect of iron addition shows higher levels of primary production south of 50° S, with very little difference observed in the subantarctic and polar frontal zone. These results emphasize the need for better parameterization of photosynthetic parameters in biogeochemical models around sensitivities in their response to iron supply. Future biogeochemical models will need to consider the combined and individual effects of iron and light to better resolve the natural background in primary production and predict its response under a changing climate.

  19. Are Hydrostatic Models Still Capable of Simulating Oceanic Fronts

    Science.gov (United States)

    2016-11-10

    stress components which can be modeled by a turbulence closure model. In the present study, the standard Smagorinsky LES model is used. The conservation...is used to solve the pressure Poisson equation. The model is parallelized with Message Passing Interface (MPI). 2.2 Modification to NHWAVE

  20. Ocean Heat and Carbon Uptake in Transient Climate Change: Identifying Model Uncertainty

    Science.gov (United States)

    Romanou, Anastasia; Marshall, John

    2015-01-01

    Global warming on decadal and centennial timescales is mediated and ameliorated by the oceansequestering heat and carbon into its interior. Transient climate change is a function of the efficiency by whichanthropogenic heat and carbon are transported away from the surface into the ocean interior (Hansen et al. 1985).Gregory and Mitchell (1997) and Raper et al. (2002) were the first to identify the importance of the ocean heat uptakeefficiency in transient climate change. Observational estimates (Schwartz 2012) and inferences from coupledatmosphere-ocean general circulation models (AOGCMs; Gregory and Forster 2008; Marotzke et al. 2015), suggest thatocean heat uptake efficiency on decadal timescales lies in the range 0.5-1.5 W/sq m/K and is thus comparable to theclimate feedback parameter (Murphy et al. 2009). Moreover, the ocean not only plays a key role in setting the timing ofwarming but also its regional patterns (Marshall et al. 2014), which is crucial to our understanding of regional climate,carbon and heat uptake, and sea-level change. This short communication is based on a presentation given by A.Romanou at a recent workshop, Oceans Carbon and Heat Uptake: Uncertainties and Metrics, co-hosted by US CLIVARand OCB. As briefly reviewed below, we have incomplete but growing knowledge of how ocean models used in climatechange projections sequester heat and carbon into the interior. To understand and thence reduce errors and biases inthe ocean component of coupled models, as well as elucidate the key mechanisms at work, in the final section we outlinea proposed model intercomparison project named FAFMIP. In FAFMIP, coupled integrations would be carried out withprescribed overrides of wind stress and freshwater and heat fluxes acting at the sea surface.

  1. Xenobiotic Induced Model of Primary Biliary Cirrhosis

    Directory of Open Access Journals (Sweden)

    Arsenijevic Aleksandar

    2014-10-01

    Full Text Available Primarna bilijarna ciroza (PBC je autoimunska bolest jetre koju karakteriše destrukcija intrahepatičnih žučnih kanalića i prisistvo antimitohondrijalnih antitela (AMAs. Poslednjih godina je razvijeno nekoliko mišjih modela PBC koji imaju slične serološke, biohemijske i histološke karakteristike kao i humana PBC. Ovi animalni modeli su omogućili ispitivanje etiologije i mehanizama uključenih u patogenezu PBC. U PBC imunski odgovor je usmeren na E2 komponentu 2-okso-kiseline dehidrogenaza familije enzima koji su locirani u mitohondrijama, a imunodominantni epitop je peptidna sekvenca sa lipidima koja je zajednička za ove enzime. Imunizacija miševa 2-oktinoičnom kisleinom vezanom za goveđi serumski albumin (2-OA-BSA, antigenom koji je strukturno sličan E2 subjedinici kompleksa piruvat dehidrogenaze (PDC-E2, omogućava razvoj histoloških promena koje karakterišu PBC kod ljudi. Ovaj model PBC indukovan ksenobiotikom je pogodan za ispitivanje početnih događaja u patogenezi PBC i za razvoj novih lekova za PBC.

  2. Towards Ocean Grazer's Modular Power Take-Off System Modeling : A Port-Hamiltonian Approach

    NARCIS (Netherlands)

    Barradas-Berglind, J. J.; Muñoz Arias, M.; Wei, Y.; Prins, W.A.; Vakis, A.I.; Jayawardhana, B.; Dochain, Denis; Henrion, Didier; Peaucelle, Dimitri

    This paper presents a modular modeling framework for the Ocean Grazer's Power Take-Off (PTO) system, which operates as an array of point-absorber type devices connected to a hydraulic system. The modeling is based on the port-Hamiltonian (PH) framework that enables energy-based analysis and control

  3. Long-term controls on ocean phosphorus and oxygen in a global biogeochemical model

    NARCIS (Netherlands)

    Palastanga, V.; Slomp, C.P.; Heinze, C.

    2011-01-01

    In this study, we use a biogeochemical ocean general circulation model (HAMOCC), originally developed for the carbon and silicon cycles, and expand it with a description of the sedimentary phosphorus (P) cycle. The model simulates the release of reactive P by aerobic and anaerobic degradation of

  4. A Fully Implicit Model of the Three-Dimensional Thermohaline Ocean Circulation

    NARCIS (Netherlands)

    Dijkstra, Henk A.; Oksuzoglu, Hakan; Wubs, Fred. W.; Botta, Eugen F.F.

    2001-01-01

    In this paper, a fully implicit numerical model of the three-dimensional thermohaline ocean circulation is presented. With this numerical model it is possible to follow branches of steady states in parameter space and monitor their linear stability. Also, transient flows can be computed allowing

  5. Multi-mission mean sea surface and geoid models for ocean monitoring within the GOCINA project

    Science.gov (United States)

    Andersen, O. B.; Knudsen, P.; Anne, V. L.

    2004-05-01

    A major goal of the EU project GOCINA (Geoid and Ocean Circulation In the North Atlantic) is to develop tools for ocean monitoring using satellite altimetry combined with satellite gravimetry. Furthermore, the project will determine an accurate geoid in the region between Greenland and the UK and, hereby, create a platform for validation of future GOCE Level 2 data and higher order scientific products. The central quantity bridging the geoid and the ocean circulation is the mean dynamic topography, which is the difference between the mean sea surface and the geoid. The mean dynamic topography provides the absolute reference surface for the ocean circulation. The improved determination of the mean circulation will advance the understanding of the role of the ocean mass and heat transport in climate change. To calculate the best possible synthetic mean dynamic topographies a new mean sea surface (KMS03) has been derived from nine years of altimetric data (1993-2001). The regional geoid has furthermore being updated using GRACE and gravimetric data from a recent airborne survey. New synthetic mean dynamic topography models have been computed from the best available geoid models (EGM96, GRACE, GOCINA) and the present mean sea surface models (i.e. CLS01, GSFC00, KMS03). These models will be compared with state of the art hydrodynamic mean dynamic topography models in the North Atlantic GOCINA area. An extended comparison in the Artic Ocean will also be presented to demonstrate the impact of improved geoid and mean sea surface modeling. Particularly using the GRACE derived geoid models, and the KMS03 mean sea surface.

  6. A Multi-Process Test Case to Perform Comparative Analysis of Coastal Oceanic Models

    Science.gov (United States)

    Lemarié, F.; Burchard, H.; Knut, K.; Debreu, L.

    2016-12-01

    Due to the wide variety of choices that need to be made during the development of dynamical kernels of oceanic models, there is a strong need for an effective and objective assessment of the various methods and approaches that predominate in the community. We present here an idealized multi-scale scenario for coastal ocean models combining estuarine, coastal and shelf sea scales at midlatitude. The bathymetry, initial conditions and external forcings are defined analytically so that any model developer or user could reproduce the test case with its own numerical code. Thermally stratified conditions are prescribed and a tidal forcing is imposed as a propagating coastal Kelvin wave. The following physical processes can be assessed from the model results: estuarine process driven by tides and buoyancy gradients, the river plume dynamics, tidal fronts, and the interaction between tides and inertial oscillations. We show results obtained using the GETM (General Estuarine Transport Model) and the CROCO (Coastal and Regional Ocean Community model) models. Those two models are representative of the diversity of numerical methods in use in coastal models: GETM is based on a quasi-lagrangian vertical coordinate, a coupled space-time approach for advective terms, a TVD (Total Variation Diminishing) tracer advection scheme while CROCO is discretized with a quasi-eulerian vertical coordinate, a method of lines is used for advective terms, and tracer advection satisfies the TVB (Total Variation Bounded) property. The multiple scales are properly resolved thanks to nesting strategies, 1-way nesting for GETM and 2-way nesting for CROCO. Such test case can be an interesting experiment to continue research in numerical approaches as well as an efficient tool to allow intercomparison between structured-grid and unstructured-grid approaches. Reference : Burchard, H., Debreu, L., Klingbeil, K., Lemarié, F. : The numerics of hydrostatic structured-grid coastal ocean models: state of

  7. The Hamburg large scale geostrophic ocean general circulation model. Cycle 1

    International Nuclear Information System (INIS)

    Maier-Reimer, E.; Mikolajewicz, U.

    1992-02-01

    The rationale for the Large Scale Geostrophic ocean circulation model (LSG-OGCM) is based on the observations that for a large scale ocean circulation model designed for climate studies, the relevant characteristic spatial scales are large compared with the internal Rossby radius throughout most of the ocean, while the characteristic time scales are large compared with the periods of gravity modes and barotropic Rossby wave modes. In the present version of the model, the fast modes have been filtered out by a conventional technique of integrating the full primitive equations, including all terms except the nonlinear advection of momentum, by an implicit time integration method. The free surface is also treated prognostically, without invoking a rigid lid approximation. The numerical scheme is unconditionally stable and has the additional advantage that it can be applied uniformly to the entire globe, including the equatorial and coastal current regions. (orig.)

  8. Simulation of the global ocean thermohaline circulation with an eddy-resolving INMIO model configuration

    Science.gov (United States)

    Ushakov, K. V.; Ibrayev, R. A.

    2017-11-01

    In this paper, the first results of a simulation of the mean World Ocean thermohaline characteristics obtained by the INMIO ocean general circulation model configured with 0.1 degree resolution in a 5-year long numerical experiment following the CORE-II protocol are presented. The horizontal and zonal mean distributions of the solution bias against the WOA09 data are analyzed. The seasonal cycle of heat content at a specified site of the North Atlantic is also discussed. The simulation results demonstrate a clear improvement in the quality of representation of the upper ocean compared to the results of experiments with 0.5 and 0.25 degree model configurations. Some remaining biases of the model solution and possible ways of their overcoming are highlighted.

  9. Effects of Precipitation on Ocean Mixed-Layer Temperature and Salinity as Simulated in a 2-D Coupled Ocean-Cloud Resolving Atmosphere Model

    Science.gov (United States)

    Li, Xiaofan; Sui, C.-H.; Lau, K-M.; Adamec, D.

    1999-01-01

    A two-dimensional coupled ocean-cloud resolving atmosphere model is used to investigate possible roles of convective scale ocean disturbances induced by atmospheric precipitation on ocean mixed-layer heat and salt budgets. The model couples a cloud resolving model with an embedded mixed layer-ocean circulation model. Five experiment are performed under imposed large-scale atmospheric forcing in terms of vertical velocity derived from the TOGA COARE observations during a selected seven-day period. The dominant variability of mixed-layer temperature and salinity are simulated by the coupled model with imposed large-scale forcing. The mixed-layer temperatures in the coupled experiments with 1-D and 2-D ocean models show similar variations when salinity effects are not included. When salinity effects are included, however, differences in the domain-mean mixed-layer salinity and temperature between coupled experiments with 1-D and 2-D ocean models could be as large as 0.3 PSU and 0.4 C respectively. Without fresh water effects, the nocturnal heat loss over ocean surface causes deep mixed layers and weak cooling rates so that the nocturnal mixed-layer temperatures tend to be horizontally-uniform. The fresh water flux, however, causes shallow mixed layers over convective areas while the nocturnal heat loss causes deep mixed layer over convection-free areas so that the mixed-layer temperatures have large horizontal fluctuations. Furthermore, fresh water flux exhibits larger spatial fluctuations than surface heat flux because heavy rainfall occurs over convective areas embedded in broad non-convective or clear areas, whereas diurnal signals over whole model areas yield high spatial correlation of surface heat flux. As a result, mixed-layer salinities contribute more to the density differences than do mixed-layer temperatures.

  10. Application of sediment core modelling to interpreting the glacial-interglacial record of Southern Ocean silica cycling

    Directory of Open Access Journals (Sweden)

    A. Ridgwell

    2007-07-01

    Full Text Available Sediments from the Southern Ocean reveal a meridional divide in biogeochemical cycling response to the glacial-interglacial cycles of the late Neogene. South of the present-day position of the Antarctic Polar Front in the Atlantic sector of the Southern Ocean, biogenic opal is generally much more abundant in sediments during interglacials compared to glacials. To the north, an anti-phased relationship is observed, with maximum opal abundance instead occurring during glacials. This antagonistic response of sedimentary properties provides an important model validation target for testing hypotheses of glacial-interglacial change against, particularly for understanding the causes of the concurrent variability in atmospheric CO2. Here, I illustrate a time-dependent modelling approach to helping understand climates of the past by means of the mechanistic simulation of marine sediment core records. I find that a close match between model-predicted and observed down-core changes in sedimentary opal content can be achieved when changes in seasonal sea-ice extent are imposed, whereas the predicted sedimentary response to iron fertilization on its own is not consistent with sedimentary observations. The results of this sediment record model-data comparison supports previous inferences that the changing cryosphere is the primary driver of the striking features exhibited by the paleoceanographic record of this region.

  11. Modeling Reef Fish Biomass, Recovery Potential, and Management Priorities in the Western Indian Ocean

    Science.gov (United States)

    McClanahan, Timothy R.; Maina, Joseph M.; Graham, Nicholas A. J.; Jones, Kendall R.

    2016-01-01

    Fish biomass is a primary driver of coral reef ecosystem services and has high sensitivity to human disturbances, particularly fishing. Estimates of fish biomass, their spatial distribution, and recovery potential are important for evaluating reef status and crucial for setting management targets. Here we modeled fish biomass estimates across all reefs of the western Indian Ocean using key variables that predicted the empirical data collected from 337 sites. These variables were used to create biomass and recovery time maps to prioritize spatially explicit conservation actions. The resultant fish biomass map showed high variability ranging from ~15 to 2900 kg/ha, primarily driven by human populations, distance to markets, and fisheries management restrictions. Lastly, we assembled data based on the age of fisheries closures and showed that biomass takes ~ 25 years to recover to typical equilibrium values of ~1200 kg/ha. The recovery times to biomass levels for sustainable fishing yields, maximum diversity, and ecosystem stability or conservation targets once fishing is suspended was modeled to estimate temporal costs of restrictions. The mean time to recovery for the whole region to the conservation target was 8.1(± 3SD) years, while recovery to sustainable fishing thresholds was between 0.5 and 4 years, but with high spatial variation. Recovery prioritization scenario models included one where local governance prioritized recovery of degraded reefs and two that prioritized minimizing recovery time, where countries either operated independently or collaborated. The regional collaboration scenario selected remote areas for conservation with uneven national responsibilities and spatial coverage, which could undermine collaboration. There is the potential to achieve sustainable fisheries within a decade by promoting these pathways according to their social-ecological suitability. PMID:27149673

  12. Modeling Reef Fish Biomass, Recovery Potential, and Management Priorities in the Western Indian Ocean.

    Science.gov (United States)

    McClanahan, Timothy R; Maina, Joseph M; Graham, Nicholas A J; Jones, Kendall R

    2016-01-01

    Fish biomass is a primary driver of coral reef ecosystem services and has high sensitivity to human disturbances, particularly fishing. Estimates of fish biomass, their spatial distribution, and recovery potential are important for evaluating reef status and crucial for setting management targets. Here we modeled fish biomass estimates across all reefs of the western Indian Ocean using key variables that predicted the empirical data collected from 337 sites. These variables were used to create biomass and recovery time maps to prioritize spatially explicit conservation actions. The resultant fish biomass map showed high variability ranging from ~15 to 2900 kg/ha, primarily driven by human populations, distance to markets, and fisheries management restrictions. Lastly, we assembled data based on the age of fisheries closures and showed that biomass takes ~ 25 years to recover to typical equilibrium values of ~1200 kg/ha. The recovery times to biomass levels for sustainable fishing yields, maximum diversity, and ecosystem stability or conservation targets once fishing is suspended was modeled to estimate temporal costs of restrictions. The mean time to recovery for the whole region to the conservation target was 8.1(± 3SD) years, while recovery to sustainable fishing thresholds was between 0.5 and 4 years, but with high spatial variation. Recovery prioritization scenario models included one where local governance prioritized recovery of degraded reefs and two that prioritized minimizing recovery time, where countries either operated independently or collaborated. The regional collaboration scenario selected remote areas for conservation with uneven national responsibilities and spatial coverage, which could undermine collaboration. There is the potential to achieve sustainable fisheries within a decade by promoting these pathways according to their social-ecological suitability.

  13. Biogeochemical protocols and diagnostics for the CMIP6 Ocean Model Intercomparison Project (OMIP

    Directory of Open Access Journals (Sweden)

    J. C. Orr

    2017-06-01

    Full Text Available The Ocean Model Intercomparison Project (OMIP focuses on the physics and biogeochemistry of the ocean component of Earth system models participating in the sixth phase of the Coupled Model Intercomparison Project (CMIP6. OMIP aims to provide standard protocols and diagnostics for ocean models, while offering a forum to promote their common assessment and improvement. It also offers to compare solutions of the same ocean models when forced with reanalysis data (OMIP simulations vs. when integrated within fully coupled Earth system models (CMIP6. Here we detail simulation protocols and diagnostics for OMIP's biogeochemical and inert chemical tracers. These passive-tracer simulations will be coupled to ocean circulation models, initialized with observational data or output from a model spin-up, and forced by repeating the 1948–2009 surface fluxes of heat, fresh water, and momentum. These so-called OMIP-BGC simulations include three inert chemical tracers (CFC-11, CFC-12, SF6 and biogeochemical tracers (e.g., dissolved inorganic carbon, carbon isotopes, alkalinity, nutrients, and oxygen. Modelers will use their preferred prognostic BGC model but should follow common guidelines for gas exchange and carbonate chemistry. Simulations include both natural and total carbon tracers. The required forced simulation (omip1 will be initialized with gridded observational climatologies. An optional forced simulation (omip1-spunup will be initialized instead with BGC fields from a long model spin-up, preferably for 2000 years or more, and forced by repeating the same 62-year meteorological forcing. That optional run will also include abiotic tracers of total dissolved inorganic carbon and radiocarbon, CTabio and 14CTabio, to assess deep-ocean ventilation and distinguish the role of physics vs. biology. These simulations will be forced by observed atmospheric histories of the three inert gases and CO2 as well as carbon isotope ratios of CO2. OMIP-BGC simulation

  14. Biogeochemical protocols and diagnostics for the CMIP6 Ocean Model Intercomparison Project (OMIP)

    Science.gov (United States)

    Orr, James C.; Najjar, Raymond G.; Aumont, Olivier; Bopp, Laurent; Bullister, John L.; Danabasoglu, Gokhan; Doney, Scott C.; Dunne, John P.; Dutay, Jean-Claude; Graven, Heather; Griffies, Stephen M.; John, Jasmin G.; Joos, Fortunat; Levin, Ingeborg; Lindsay, Keith; Matear, Richard J.; McKinley, Galen A.; Mouchet, Anne; Oschlies, Andreas; Romanou, Anastasia; Schlitzer, Reiner; Tagliabue, Alessandro; Tanhua, Toste; Yool, Andrew

    2017-06-01

    The Ocean Model Intercomparison Project (OMIP) focuses on the physics and biogeochemistry of the ocean component of Earth system models participating in the sixth phase of the Coupled Model Intercomparison Project (CMIP6). OMIP aims to provide standard protocols and diagnostics for ocean models, while offering a forum to promote their common assessment and improvement. It also offers to compare solutions of the same ocean models when forced with reanalysis data (OMIP simulations) vs. when integrated within fully coupled Earth system models (CMIP6). Here we detail simulation protocols and diagnostics for OMIP's biogeochemical and inert chemical tracers. These passive-tracer simulations will be coupled to ocean circulation models, initialized with observational data or output from a model spin-up, and forced by repeating the 1948-2009 surface fluxes of heat, fresh water, and momentum. These so-called OMIP-BGC simulations include three inert chemical tracers (CFC-11, CFC-12, SF6) and biogeochemical tracers (e.g., dissolved inorganic carbon, carbon isotopes, alkalinity, nutrients, and oxygen). Modelers will use their preferred prognostic BGC model but should follow common guidelines for gas exchange and carbonate chemistry. Simulations include both natural and total carbon tracers. The required forced simulation (omip1) will be initialized with gridded observational climatologies. An optional forced simulation (omip1-spunup) will be initialized instead with BGC fields from a long model spin-up, preferably for 2000 years or more, and forced by repeating the same 62-year meteorological forcing. That optional run will also include abiotic tracers of total dissolved inorganic carbon and radiocarbon, CTabio and 14CTabio, to assess deep-ocean ventilation and distinguish the role of physics vs. biology. These simulations will be forced by observed atmospheric histories of the three inert gases and CO2 as well as carbon isotope ratios of CO2. OMIP-BGC simulation protocols are

  15. A Unified Model for Methylmercury Formation and Bioaccumulation in the Global Ocean

    Science.gov (United States)

    Zhang, Y.; Schartup, A. T.; Soerensen, A.; Dutkiewicz, S.; Sunderland, E. M.

    2017-12-01

    Marine fish consumption is the main exposure pathway for methylmercury (MeHg), a neurotoxin, in many countries. The Hg in the ocean is mainly from atmospheric deposition in inorganic forms. How the deposited Hg is methylated and accumulated in biota remain an open question. We develop a 3D model (MITgcm) for MeHg formation and bioaccumulation in the global ocean and evaluate the driving factors. The model is based on a previous published inorganic Hg model and is coupled with the bioaccumulation model for marine methylmercury (BAM3) with ocean biogeochemistry from DARWIN model. We develop a unified scheme that scales methylation by microbe activity and assumes demethylation a function of short wave radiation and temperature. The model result agrees well with currently available observations at the 0-100 m (mod.: 43±52 fM vs obs.: 69±67 fM, 1 fM = 10-15 mol/L), 500 m (360±280 fM vs 340±260 fM), and 1000 m depth (260±170 fM vs 290±210 fM). In the surface ocean, we find the MeHg concentrations are a function of latitude, resulting from photodemethylation. The model reproduces the high concentrations observed over the sub-thermocline of Pacific Subarctic Gyre, which is associated with active microbe activity. On the other hand, both the model and observations suggest low concentrations over oligotrophic regions such as Indian Ocean Gyre. In the tropical oceans, the model predicts the highest MeHg concentrations, consistent with observation, and it is caused by the overlapping high atmospheric deposition and active microbe activities. The model captures the high concentrations in the subsurface of the Arctic and Southern Ocean where low temperature slows down abiotic demethylation. The modeled global average MeHg concentration in phytoplankton is 2.0 ng/g (by wet weight), within the same range of observations. High concentrations are modeled over tropical and high-latitude regions due to the dominance of small sized prochlorococcus and high seawater concentrations

  16. Assessment of Primary 5 Students' Mathematical Modelling Competencies

    Science.gov (United States)

    Chan, Chun Ming Eric; Ng, Kit Ee Dawn; Widjaja, Wanty; Seto, Cynthia

    2012-01-01

    Mathematical modelling is increasingly becoming part of an instructional approach deemed to develop students with competencies to function as 21st century learners and problem solvers. As mathematical modelling is a relatively new domain in the Singapore primary school mathematics curriculum, many teachers may not be aware of the learning outcomes…

  17. LOSCAR: Long-term Ocean-atmosphere-Sediment CArbon cycle Reservoir Model

    Science.gov (United States)

    Zeebe, R. E.

    2011-06-01

    The LOSCAR model is designed to efficiently compute the partitioning of carbon between ocean, atmosphere, and sediments on time scales ranging from centuries to millions of years. While a variety of computationally inexpensive carbon cycle models are already available, many are missing a critical sediment component, which is indispensable for long-term integrations. One of LOSCAR's strengths is the coupling of ocean-atmosphere routines to a computationally efficient sediment module. This allows, for instance, adequate computation of CaCO3 dissolution, calcite compensation, and long-term carbon cycle fluxes, including weathering of carbonate and silicate rocks. The ocean component includes various biogeochemical tracers such as total carbon, alkalinity, phosphate, oxygen, and stable carbon isotopes. We have previously published applications of the model tackling future projections of ocean chemistry and weathering, pCO2 sensitivity to carbon cycle perturbations throughout the Cenozoic, and carbon/calcium cycling during the Paleocene-Eocene Thermal Maximum. The focus of the present contribution is the detailed description of the model including numerical architecture, processes and parameterizations, tuning, and examples of input and output. Typical CPU integration times of LOSCAR are of order seconds for several thousand model years on current standard desktop machines. The LOSCAR source code in C can be obtained from the author by sending a request to loscar.model@gmail.com.

  18. Ocean response to volcanic eruptions in Coupled Model Intercomparison Project 5 simulations

    KAUST Repository

    Ding, Yanni

    2014-09-01

    We examine the oceanic impact of large tropical volcanic eruptions as they appear in ensembles of historical simulations from eight Coupled Model Intercomparison Project Phase 5 models. These models show a response that includes lowering of global average sea surface temperature by 0.1–0.3 K, comparable to the observations. They show enhancement of Arctic ice cover in the years following major volcanic eruptions, with long-lived temperature anomalies extending to the middepth and deep ocean on decadal to centennial timescales. Regional ocean responses vary, although there is some consistent hemispheric asymmetry associated with the hemisphere in which the eruption occurs. Temperature decreases and salinity increases contribute to an increase in the density of surface water and an enhancement in the overturning circulation of the North Atlantic Ocean following these eruptions. The strength of this overturning increase varies considerably from model to model and is correlated with the background variability of overturning in each model. Any cause/effect relationship between eruptions and the phase of El Niño is weak.

  19. Modelling the effect of boundary scavenging on Thorium and Protactinium profiles in the ocean

    Directory of Open Access Journals (Sweden)

    M. Roy-Barman

    2009-12-01

    Full Text Available The "boundary scavenging" box model is a cornerstone of our understanding of the particle-reactive radionuclide fluxes between the open ocean and the ocean margins. However, it does not describe the radionuclide profiles in the water column. Here, I present the transport-reaction equations for radionuclides transported vertically by reversible scavenging on settling particles and laterally by horizontal currents between the margin and the open ocean. Analytical solutions of these equations are compared with existing data. In the Pacific Ocean, the model produces "almost" linear 230Th profiles (as observed in the data despite lateral transport. However, omitting lateral transport biaises the 230Th based particle flux estimates by as much as 50%. 231Pa profiles are well reproduced in the whole water column of the Pacific Margin and from the surface down to 3000 m in the Pacific subtropical gyre. Enhanced bottom scavenging or inflow of 231Pa-poor equatorial water may account for the model-data discrepancy below 3000 m. The lithogenic 232Th is modelled using the same transport parameters as 230Th but a different source function. The main source of the 232Th scavenged in the open Pacific is advection from the ocean margin, whereas a net flux of 230Th produced in the open Pacific is advected and scavenged at the margin, illustrating boundary exchange. In the Arctic Ocean, the model reproduces 230Th measured profiles that the uni-dimensional scavenging model or the scavenging-ventilation model failed to explain. Moreover, if lateral transport is ignored, the 230Th based particle settling speed may by underestimated by a factor 4 at the Arctic Ocean margin. The very low scavenging rate in the open Arctic Ocean combined with the enhanced scavenging at the margin accounts for the lack of high 231Pa/230Th ratio in arctic

  20. Relaxation oscillations in an idealized ocean circulation model

    Science.gov (United States)

    Roberts, Andrew; Saha, Raj

    2017-04-01

    This work is motivated by a desire to understand transitions between stable equilibria observed in Stommel's 1961 thermohaline circulation model. We adapt the model, including a forcing parameter as a dynamic slow variable. The resulting model is a piecewise-smooth, three time-scale system. The model is analyzed using geometric singular perturbation theory to demonstrate the existence of attracting periodic orbits. The system is capable of producing classical relaxation oscillations as expected, but there is also a parameter regime in which the model exhibits small amplitude oscillations known as canard cycles. Forcing the model with obliquity variations from the last 100,000 years produces oscillations that are modulated in amplitude and frequency. The output shows similarities with important features of the climate proxy data of the same period.

  1. Arctide2017, a high-resolution regional tidal model in the Arctic Ocean

    DEFF Research Database (Denmark)

    Cancet, M.; Andersen, O. B.; Lyard, F.

    2018-01-01

    The Arctic Ocean is a challenging region for tidal modelling. The accuracy of the global tidal models decreases by several centimeters in the Polar Regions, which has a large impact on the quality of the satellite altimeter sea surface heights and the altimetry-derived products. NOVELTIS, DTU Space...... and LEGOS have developed Arctide2017, a regional, high-resolution tidal atlas in the Arctic Ocean, in the framework of an extension of the CryoSat Plus for Ocean (CP4O) ESA STSE (Support to Science Element) project. In particular, this atlas benefits from the assimilation of the most complete satellite...... altimetry dataset ever used in this region, including Envisat data up to 82°N and CryoSat-2 data between 82°N and 88°N. The combination of these satellite altimetry missions gives the best possible coverage of altimetry-derived tidal constituents. The available tide gauge data were also used for data...

  2. Microwave Remote Sensing Modeling of Ocean Surface Salinity and Winds Using an Empirical Sea Surface Spectrum

    Science.gov (United States)

    Yueh, Simon H.

    2004-01-01

    Active and passive microwave remote sensing techniques have been investigated for the remote sensing of ocean surface wind and salinity. We revised an ocean surface spectrum using the CMOD-5 geophysical model function (GMF) for the European Remote Sensing (ERS) C-band scatterometer and the Ku-band GMF for the NASA SeaWinds scatterometer. The predictions of microwave brightness temperatures from this model agree well with satellite, aircraft and tower-based microwave radiometer data. This suggests that the impact of surface roughness on microwave brightness temperatures and radar scattering coefficients of sea surfaces can be consistently characterized by a roughness spectrum, providing physical basis for using combined active and passive remote sensing techniques for ocean surface wind and salinity remote sensing.

  3. Implementing Numerical Experiments Based on the Coupled Model of Atmospheric General Circulation and Thermohaline Ocean One

    Directory of Open Access Journals (Sweden)

    V. P. Parhomenko

    2015-01-01

    Full Text Available The paper presents a realized hydrodynamic three-dimensional global climatic model, which comprises the model blocks of atmospheric general circulation, thermohaline large-scale circulation of the ocean, and sea ice evolution. Before rather strongly aggregated heat-moisturebalance model of the atmosphere for temperature and humidity of a surface layer was used as a model of the atmosphere. The atmospheric general circulation model is significantly more complicated and allows us to describe processes in the atmosphere more adequately. Functioning of a coupled climatic model is considered in conditions of the seasonal cycle of solar radiation.The paper considers a procedure for coupled calculation of the ocean model and atmospheric general circulation model. Synchronization of a number of parameters in both models is necessary for their joint action. In this regard a procedure of two-dimensional interpolation of data defined on the grids of the ocean model and atmosphere model and back is developed. A feature of this task is discrepancy of grid nodes and continental configurations in models. Coupled model-based long-term calculations for more than 400 years have shown its stable work. Calculation results and comparison with observation data are under discussion.The paper shows distribution of mean global atmosphere temperature versus time in stable conditions to demonstrate that there is inter-annual variability of atmosphere temperature at the steady state of a climate system. It presents distribution of temperature difference of the ocean surface from the observations and from the model of the ocean thermohaline circulation for January. Noticeable deviations of temperature are observed near Antarctica. Apparently, it is because of inaccurate calculation of the sea ice distribution in model. The geographical distribution of the ocean surface temperature for January with coupled calculation shows, in general, a zonal uniform structure of isolines

  4. Estimating the numerical diapycnal mixing in an eddy-permitting ocean model

    Science.gov (United States)

    Megann, Alex

    2018-01-01

    Constant-depth (or "z-coordinate") ocean models such as MOM4 and NEMO have become the de facto workhorse in climate applications, having attained a mature stage in their development and are well understood. A generic shortcoming of this model type, however, is a tendency for the advection scheme to produce unphysical numerical diapycnal mixing, which in some cases may exceed the explicitly parameterised mixing based on observed physical processes, and this is likely to have effects on the long-timescale evolution of the simulated climate system. Despite this, few quantitative estimates have been made of the typical magnitude of the effective diapycnal diffusivity due to numerical mixing in these models. GO5.0 is a recent ocean model configuration developed jointly by the UK Met Office and the National Oceanography Centre. It forms the ocean component of the GC2 climate model, and is closely related to the ocean component of the UKESM1 Earth System Model, the UK's contribution to the CMIP6 model intercomparison. GO5.0 uses version 3.4 of the NEMO model, on the ORCA025 global tripolar grid. An approach to quantifying the numerical diapycnal mixing in this model, based on the isopycnal watermass analysis of Lee et al. (2002), is described, and the estimates thereby obtained of the effective diapycnal diffusivity in GO5.0 are compared with the values of the explicit diffusivity used by the model. It is shown that the effective mixing in this model configuration is up to an order of magnitude higher than the explicit mixing in much of the ocean interior, implying that mixing in the model below the mixed layer is largely dominated by numerical mixing. This is likely to have adverse consequences for the representation of heat uptake in climate models intended for decadal climate projections, and in particular is highly relevant to the interpretation of the CMIP6 class of climate models, many of which use constant-depth ocean models at ¼° resolution

  5. A global mean ocean circulation estimation using goce gravity models - the DTU12MDT mean dynamic topography model

    DEFF Research Database (Denmark)

    Knudsen, Per; Andersen, Ole Baltazar

    2012-01-01

    The Gravity and Ocean Circulation Experiment - GOCE satellite mission measure the Earth gravity field with unprecedented accuracy leading to substantial improvements in the modelling of the ocean circulation and transport. In this study of the performance of GOCE, a newer gravity model have been...... have been improved significantly compared to results obtained using pre-GOCE gravity field models. The results of this study show that geostrophic surface currents associated with the mean circulation have been further improved and that currents having speeds down to 5 cm/s have been recovered....

  6. Sensitivity of Ocean Reflectance Inversion Models for Identifying and Discriminating Between Phytoplankton Functional Groups

    Science.gov (United States)

    Werdell, P. Jeremy; Ooesler, Collin S.

    2012-01-01

    The daily, synoptic images provided by satellite ocean color instruments provide viable data streams for observing changes in the biogeochemistrY of marine ecosystems. Ocean reflectance inversion models (ORMs) provide a common mechanism for inverting the "color" of the water observed a satellite into marine inherent optical properties (lOPs) through a combination of empiricism and radiative transfer theory. lOPs, namely the spectral absorption and scattering characteristics of ocean water and its dissolved and particulate constituents, describe the contents of the upper ocean, information critical for furthering scientific understanding of biogeochemical oceanic processes. Many recent studies inferred marine particle sizes and discriminated between phytoplankton functional groups using remotely-sensed lOPs. While all demonstrated the viability of their approaches, few described the vertical distributions of the water column constituents under consideration and, thus, failed to report the biophysical conditions under which their model performed (e.g., the depth and thickness of the phytoplankton bloom(s)). We developed an ORM to remotely identifY Noctiluca miliaris and other phytoplankton functional types using satellite ocean color data records collected in the northern Arabian Sea. Here, we present results from analyses designed to evaluate the applicability and sensitivity of the ORM to varied biophysical conditions. Specifically, we: (1) synthesized a series of vertical profiles of spectral inherent optical properties that represent a wide variety of bio-optical conditions for the northern Arabian Sea under aN Miliaris bloom; (2) generated spectral remote-sensing reflectances from these profiles using Hydrolight; and, (3) applied the ORM to the synthesized reflectances to estimate the relative concentrations of diatoms and N Miliaris for each example. By comparing the estimates from the inversion model to those from synthesized vertical profiles, we were able to

  7. The Ocean-Land-Atmosphere Model (OLAM): A new Generation of Earth System Model

    Science.gov (United States)

    Walko, R. L.; Avissar, R.

    2006-12-01

    The Ocean-Land-Atmosphere Model (OLAM) has been developed to extend the capabilities of the Regional Atmospheric Modeling System (RAMS) to a global modeling framework. OLAM is a new model with regard to its dynamic core, grid configuration, memory structure, and numerical solution technique. Instead of the Boussinesq approximation used in RAMS, OLAM solves the full compressible Navier-Stokes equations in conservation form using finite-volume numerical operators that conserve mass, momentum, and energy to machine precision. In place of RAMS' structured multiple nested grids and hexahedral grid cells on a polar stereographic projection, OLAM uses a single unstructured grid and pentahedral (prism) grid cells (with a triangular footprint) which conform to the sphere without a coordinate transformation. OLAM's grid topology enables local mesh refinement to any degree without the need for special grid nesting algorithms; all communication between regions of different resolution is accomplished seamlessly by flux-conservative advective and diffusive transport. OLAM represents topography using a form of the volume-fraction or shaved grid cell method in which model levels are strictly horizontal, rather than terrain- following, and therefore intersect topography. Grid cell face areas, which explicitly appear in the finite volume equations and are pre-computed and stored, are reduced in proportion to any blockage by topography, thereby correctly regulating inter-cell transport and preventing advective flux normal to the ground surface. Apart from its dynamic core and grid configuration, OLAM bears a strong resemblance to RAMS. Both models share the same physical parameterizations for microphysics, land and vegetation water and energy balances, radiative transfer, and sub-grid cumulus convection. Model coding structure, I/O file formats, and methods of compiling, initializing, and executing the models are very similar or identical. Results of a variety of OLAM simulations

  8. Preliminary assessment of the performance of a global coupled atmosphere-ocean model

    International Nuclear Information System (INIS)

    Cubasch, U.

    1990-01-01

    A low-resolution version of the ECMWF global atmosphere model has been coupled to a global ocean model developed at the Max Planck Institute in Hamburg. The atmosphere model is driven by the sea surface temperature and the ice thickness calculated by the ocean model, which, in return, is driven by the wind stress, the heat flux and the freshwater flux diagnosed by the atmosphere model. Even though each model reaches stationarity when integrated on its own, the coupling of both creates problems, since the fields calculated by each model are not consistent with the ones the other model has to have in order to stay stationary, because some of the fluxes are not balanced. In the coupled experiment the combined ocean-atmosphere system drifts toward a colder state. To counteract this problem, a flux correction has been applied which balances the mean biases of each model. This method almost eliminates the climate drift of the coupled model. Problems still arise over ice covered regions

  9. Role of Southern Ocean stratification in glacial atmospheric CO2 reduction evaluated by a three-dimensional ocean general circulation model

    Science.gov (United States)

    Kobayashi, Hidetaka; Abe-Ouchi, Ayako; Oka, Akira

    2015-09-01

    Atmospheric carbon dioxide (CO2) concentration during glacial periods is known to be considerably lower than during interglacial periods. However, previous studies using an ocean general circulation model (OGCM) fail to reproduce this. Paleoclimate proxy data of the Last Glacial Maximum indicate high salinity (>37.0 practical salinity unit) and long water mass residence time (>3000 years) in the Southern Ocean, suggesting that salinity stratification was enhanced and more carbon was stored there. Reproducibility of salinity and water mass age is considered insufficient in previous OGCMs, which might affect the reproducibility of atmospheric CO2 concentration. This study investigated the role of increased stratification of the Southern Ocean in the glacial CO2 variation using an OGCM. We found that deep water formation in East Antarctica is required to explain high salinity in South Atlantic. Saltier deep Southern Ocean resulted in increased atmospheric CO2 concentration against previous estimates. This is partly due to increased volume transport of Antarctic Bottom Water and associated decrease in the water mass age of the deep Pacific Ocean. On the other hand, weakening of vertical mixing contributed to increase of the vertical gradient of dissolved inorganic carbon and decrease of atmospheric CO2 concentration. However, we show that it is unable to explain all of the glacial CO2 variations by the contribution of the Southern Ocean. Our findings indicate that detailed understanding of the impact of enhanced stratification in the Southern Ocean on the Pacific Ocean might be crucial to understanding the mechanisms behind the glacial-interglacial ocean carbon cycle variations.

  10. Atmospheric Nitrogen Deposition to the Oceans: Observation- and Model-Based Estimates

    Science.gov (United States)

    Baker, Alex

    2016-04-01

    The reactive nitrogen (Nr) burden of the atmosphere has been increased by a factor of 3-4 by anthropogenic activity since the Industrial Revolution. This has led to large increases in the deposition of nitrate and ammonium to the surface waters of the open ocean, particularly downwind of major human population centres, such as those in North America, Europe and Southeast Asia. In oligotrophic waters, this deposition has the potential to significantly impact marine productivity and the global carbon cycle. Global-scale understanding of N deposition to the oceans is reliant on our ability to produce effective models of reactive nitrogen emission, atmospheric chemistry, transport and deposition (including deposition to the land surface). Over land, N deposition models can be assessed using comparisons to regional monitoring networks of precipitation chemistry (notably those located in North America, Europe and Southeast Asia). No similar datasets exist which would allow observation - model comparisons of wet deposition for the open oceans, because long-term wet deposition records are available for only a handful of remote island sites and rain collection over the open ocean itself is logistically very difficult. In this work we attempt instead to use ~2800 observations of aerosol nitrate and ammonium concentrations, acquired from sampling aboard ships in the period 1995 - 2012, to assess the performance of modelled N deposition fields over the remote ocean. This database is non-uniformly distributed in time and space. We selected three ocean regions (the eastern tropical North Atlantic, the northern Indian Ocean and northwest Pacific) where we considered the density and distribution of observational data is sufficient to provide effective comparison to the model ensemble. Our presentation will focus on the eastern tropical North Atlantic region, which has the best data coverage of the three. We will compare dry deposition fluxes calculated from the observed nitrate

  11. An implementation of a barotropic quasigeostrophic model of ocean circulation on the MPP

    Science.gov (United States)

    Grosch, C. E.; Fatoohi, R.

    1987-01-01

    The implementation on the Massively Parallel Processor (MPP) of a barotropic quasigeostrophic model of ocean circulation is discussed. The mathematical model, including scalings and boundary conditions is discussed. The numerical scheme, which uses compact differencing is also discussed. The implementation of this model on the MPP is then presented. Finally, some performance results are given and compared to results obtained using the VPS-32 and one processor of a CRAY-2.

  12. The new version of the Institute of Numerical Mathematics Sigma Ocean Model (INMSOM) for simulation of Global Ocean circulation and its variability

    Science.gov (United States)

    Gusev, Anatoly; Fomin, Vladimir; Diansky, Nikolay; Korshenko, Evgeniya

    2017-04-01

    In this paper, we present the improved version of the ocean general circulation sigma-model developed in the Institute of Numerical Mathematics of the Russian Academy of Sciences (INM RAS). The previous version referred to as INMOM (Institute of Numerical Mathematics Ocean Model) is used as the oceanic component of the IPCC climate system model INMCM (Institute of Numerical Mathematics Climate Model (Volodin et al 2010,2013). Besides, INMOM as the only sigma-model was used for simulations according to CORE-II scenario (Danabasoglu et al. 2014,2016; Downes et al. 2015; Farneti et al. 2015). In general, INMOM results are comparable to ones of other OGCMs and were used for investigation of climatic variations in the North Atlantic (Gusev and Diansky 2014). However, detailed analysis of some CORE-II INMOM results revealed some disadvantages of the INMOM leading to considerable errors in reproducing some ocean characteristics. So, the mass transport in the Antarctic Circumpolar Current (ACC) was overestimated. As well, there were noticeable errors in reproducing thermohaline structure of the ocean. After analysing the previous results, the new version of the OGCM was developed. It was decided to entitle is INMSOM (Institute of Numerical Mathematics Sigma Ocean Model). The new title allows one to distingwish the new model, first, from its older version, and second, from another z-model developed in the INM RAS and referred to as INMIO (Institute of Numerical Mathematics and Institute of Oceanology ocean model) (Ushakov et al. 2016). There were numerous modifications in the model, some of them are as follows. 1) Formulation of the ocean circulation problem in terms of full free surface with taking into account water amount variation. 2) Using tensor form of lateral viscosity operator invariant to rotation. 3) Using isopycnal diffusion including Gent-McWilliams mixing. 4) Using atmospheric forcing computation according to NCAR methodology (Large and Yeager 2009). 5

  13. Seasonal cycle of plankton production in the Iberian margin based on a high resolution ocean model

    Science.gov (United States)

    Reboreda, Rosa; Nolasco, Rita; Castro, Carmen G.; Álvarez-Salgado, Xosé A.; Cordeiro, Nuno G. F.; Queiroga, Henrique; Dubert, Jesus

    2014-11-01

    The seasonal variability of plankton in the entire Iberian margin and the adjacent oceanic region was simulated by applying a NPZD-type biogeochemical model coupled to a physical high resolution configuration of the 3D Regional Ocean Modeling System (ROMS). The NPZD model simulated the time and space evolution of nitrate, phytoplankton/chlorophyll, zooplankton and detritus. Model results were compared to remotely sensed sea surface temperature from AVHRR, mixed layer depth from ARGO floats, and sea surface chlorophyll-a from a monthly SeaWiFS climatology. The model was able to reasonably reproduce the seasonal cycle of phytoplankton biomass in the Iberian Atlantic margin and the adjacent oceanic region. It allowed us to make a general characterization of the spatio-temporal patterns of phytoplankton and zooplankton biomass, as well as detritus and nitrate distribution. However, some limitations in the model were revealed by the Taylor Diagrams analysis. The model seemed to overestimate the offshore spring phytoplankton bloom and the upwelling-related coastal maxima of chlorophyll-a in the shelf. On the other hand, winter chlorophyll-a decrease simulated by the model over the shelf agreed with in situ samplings reported in the literature, contrasting with the high chlorophyll-a estimations of satellite data. This evidenced that care should be taken when validating model results in the Iberian coastal region using satellite chlorophyll-a products, particularly in winter.

  14. Future ocean acidification in the Canada Basin and surrounding Arctic Ocean from CMIP5 earth system models

    Science.gov (United States)

    Steiner, N. S.; Christian, J. R.; Six, K. D.; Yamamoto, A.; Yamamoto-Kawai, M.

    2014-01-01

    Six Earth system models that include an interactive carbon cycle and have contributed results to the 5th Coupled Model Intercomparison Project (CMIP5) are evaluated with respect to Arctic Ocean acidification. Projections under Representative Concentration Pathways (RCPs) 8.5 and 4.5 consistently show reductions in the bidecadal mean surface pH from about 8.1 in 1986-2005 to 7.7/7.9 by 2066-2085 in the Canada Basin, closely linked to reductions in the calcium carbonate saturation state ΩA,C from about 1.4 (2.0) to 0.7 (1.0) for aragonite (calcite) for RCP8.5. The large but opposite effects of dilution and biological drawdown of DIC and dilution of alkalinity lead to a small seasonal amplitude change in Ω, as well as intermodel differences in the timing and sign of the summer minimum. The Canada Basin shows a characteristic layering in Ω: affected by ice melt and inflowing Pacific water, shallow undersaturated layers form at the surface and subsurface, creating a shallow saturation horizon which expands from the surface downward. This is in addition to the globally observed deep saturation horizon which is continuously expanding upward with increasing CO2 uptake. The Eurasian Basin becomes undersaturated much later than the rest of the Arctic. These CMIP5 model results strengthen earlier findings, although large intermodel differences remain: Below 200 m ΩA varies by up to 1.0 in the Canada Basin and the deep saturation horizon varies from 2000 to 4000 m among the models. Differences of projected acidification changes are primarily related to sea ice retreat and responses of wind mixing and stratification.

  15. Ocean surface waves in Hurricane Ike (2008) and Superstorm Sandy (2012): Coupled model predictions and observations

    Science.gov (United States)

    Chen, Shuyi S.; Curcic, Milan

    2016-07-01

    Forecasting hurricane impacts of extreme winds and flooding requires accurate prediction of hurricane structure and storm-induced ocean surface waves days in advance. The waves are complex, especially near landfall when the hurricane winds and water depth varies significantly and the surface waves refract, shoal and dissipate. In this study, we examine the spatial structure, magnitude, and directional spectrum of hurricane-induced ocean waves using a high resolution, fully coupled atmosphere-wave-ocean model and observations. The coupled model predictions of ocean surface waves in Hurricane Ike (2008) over the Gulf of Mexico and Superstorm Sandy (2012) in the northeastern Atlantic and coastal region are evaluated with the NDBC buoy and satellite altimeter observations. Although there are characteristics that are general to ocean waves in both hurricanes as documented in previous studies, wave fields in Ike and Sandy possess unique properties due mostly to the distinct wind fields and coastal bathymetry in the two storms. Several processes are found to significantly modulate hurricane surface waves near landfall. First, the phase speed and group velocities decrease as the waves become shorter and steeper in shallow water, effectively increasing surface roughness and wind stress. Second, the bottom-induced refraction acts to turn the waves toward the coast, increasing the misalignment between the wind and waves. Third, as the hurricane translates over land, the left side of the storm center is characterized by offshore winds over very short fetch, which opposes incoming swell. Landfalling hurricanes produce broader wave spectra overall than that of the open ocean. The front-left quadrant is most complex, where the combination of windsea, swell propagating against the wind, increasing wind-wave stress, and interaction with the coastal topography requires a fully coupled model to meet these challenges in hurricane wave and surge prediction.

  16. Modelling of oceanic gas hydrate instability and methane release in response to climate change

    International Nuclear Information System (INIS)

    Reagan, M.T.; Moridis, G.J.

    2008-01-01

    Methane releases from oceanic hydrates are thought to have played a significant role in climatic changes that have occurred in the past. In this study, gas hydrate accumulations subjected to temperature changes were modelled in order to assess their potential for future methane releases into the ocean. Recent ocean and atmospheric chemistry studies were used to model 2 climate scenarios. Two types of hydrate accumulations were used to represent dispersed, low-saturation deposits. The 1-D multiphase thermodynamic-hydrological model considered the properties of benthic sediments; ocean depth; sea floor temperature; the saturation and distribution of the hydrates; and the effect of benthic biogeochemical activity. Results of the simulations showed that shallow deposits undergo rapid dissociation and are capable of producing methane fluxes of 2 to 13 mol m 3 per year over a period of decades. The fluxes exceed the ability of the anaerobic sea floor environment to sequester or consume the methane. A large proportion of the methane released in the scenarios emerged in the gas phase. Arctic hydrates may pose a threat to regional and global ecological systems. It was concluded that results of the study will be coupled with global climate models in order to assess the impact of the methane releases in relation to global climatic change. 39 refs., 5 figs

  17. Do Assimilated Drifter Velocities Improve Lagrangian Predictability in an Operational Ocean Model?

    Science.gov (United States)

    2015-05-01

    Lagrangian information into ocean models. Toner et al. (2001) used a normal mode analysis method with constrained optimization to mini- mize changes...drifter trajectories on the inner Scotian Shelf. J. Geophys. Res., 108, 3287, doi:10.1029/ 2001JC001119. Toner , M., A. D. Kirwan Jr., L. H. Kantha, and

  18. Modelling shelf-ocean exchange and its biogeochemical consequences in coastal upwelling systems

    DEFF Research Database (Denmark)

    Muchamad, Al Azhar

    margin bathymetry, and 3) what processes determine the observed variability of total organic carbon (TOC) content in shelf sediments underlying the upwelling system, with implications for the formation of petroleum source rocks. Here, a numerical ocean modeling approach is used in this thesis to explore...

  19. Low-frequency oscillations of the Atlantic Ocean meridional overturning circulation in a coupled climate model

    Directory of Open Access Journals (Sweden)

    M. Schulz

    2007-01-01

    Full Text Available Using a 3-dimensional climate model of intermediate complexity we show that the overturning circulation of the Atlantic Ocean can vary at multicentennial-to-millennial timescales for modern boundary conditions. A continuous freshwater perturbation in the Labrador Sea pushes the overturning circulation of the Atlantic Ocean into a bi-stable regime, characterized by phases of active and inactive deep-water formation in the Labrador Sea. In contrast, deep-water formation in the Nordic Seas is active during all phases of the oscillations. The actual timing of the transitions between the two circulation states occurs randomly. The oscillations constitute a 3-dimensional phenomenon and have to be distinguished from low-frequency oscillations seen previously in 2-dimensional models of the ocean. A conceptual model provides further insight into the essential dynamics underlying the oscillations of the large-scale ocean circulation. The model experiments indicate that the coupled climate system can exhibit unforced climate variability at multicentennial-to-millennial timescales that may be of relevance for Holocene climate variations.

  20. Towards coupled physical-biogeochemical models of the ocean carbon cycle

    Science.gov (United States)

    Rintoul, Stephen R.

    1992-01-01

    The purpose of this review is to discuss the critical gaps in our knowledge of ocean dynamics and biogeochemical cycles. It is assumed that the ultimate goal is the design of a model of the earth system that can predict the response to changes in the external forces driving climate.

  1. Oregon Washington Coastal Ocean Forecast System: Real-time Modeling and Data Assimilation

    Science.gov (United States)

    Erofeeva, S.; Kurapov, A. L.; Pasmans, I.

    2016-02-01

    Three-day forecasts of ocean currents, temperature and salinity along the Oregon and Washington coasts are produced daily by a numerical ROMS-based ocean circulation model. NAM is used to derive atmospheric forcing for the model. Fresh water discharge from Columbia River, Fraser River, and small rivers in Puget Sound are included. The forecast is constrained by open boundary conditions derived from the global Navy HYCOM model and once in 3 days assimilation of recent data, including HF radar surface currents, sea surface temperature from the GOES satellite, and SSH from several satellite altimetry missions. 4-dimensional variational data assimilation is implemented in 3-day time windows using the tangent linear and adjoint codes developed at OSU. The system is semi-autonomous - all the data, including NAM and HYCOM fields are automatically updated, and daily operational forecast is automatically initiated. The pre-assimilation data quality control and post-assimilation forecast quality control require the operator's involvement. The daily forecast and 60 days of hindcast fields are available for public on opendap. As part of the system model validation plots to various satellites and SEAGLIDER are also automatically updated and available on the web (http://ingria.coas.oregonstate.edu/rtdavow/). Lessons learned in this pilot real-time coastal ocean forecasting project help develop and test metrics for forecast skill assessment for the West Coast Operational Forecast System (WCOFS), currently at testing and development phase at the National Oceanic and Atmospheric Administration (NOAA).

  2. International Energy Agency Ocean Energy Systems Task 10 Wave Energy Converter Modeling Verification and Validation

    DEFF Research Database (Denmark)

    Wendt, Fabian F.; Yu, Yi-Hsiang; Nielsen, Kim

    2017-01-01

    This is the first joint reference paper for the Ocean Energy Systems (OES) Task 10 Wave Energy Converter modeling verification and validation group. The group is established under the OES Energy Technology Network program under the International Energy Agency. OES was founded in 2001 and Task 10 ...

  3. Physics, Nonlinear Time Series Analysis, Data Assimilation and Hyperfast Modeling of Nonlinear Ocean Waves

    Science.gov (United States)

    2010-09-30

    Hyperfast Modeling of Nonlinear Ocean Waves A. R. Osborne Dipartimento di Fisica Generale, Università di Torino Via Pietro Giuria 1, 10125...PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Universit?i Torino,Dipartimento di Fisica Generale,Via Pietro Giuria 1,10125 Torino, Italy, 8. PERFORMING

  4. Forecasting ocean wave energy: A Comparison of the ECMWF wave model with time series methods

    DEFF Research Database (Denmark)

    Reikard, Gordon; Pinson, Pierre; Bidlot, Jean

    2011-01-01

    (ECMWF) Wave Model, and two statistical techniques, time-varying parameter regressions and neural networks. Thirteen data sets at locations in the Atlantic and Pacific Oceans and the Gulf of Mexico are tested. The quantities to be predicted are the significant wave height, the wave period, and the wave...

  5. Preliminary evaluation of a new developed regional coupled atmosphere-ocean model system for Irish Waters

    Science.gov (United States)

    Wang, Shiyu; Lynch, Peter; McGrath, Ray

    2010-05-01

    In recent years, uncertainties in climate model projections have become of great interest because a wide range of future projection have become available from a combination of various emission scenarios and different climate models. The quality of the future projections of climate change depend critically on the ability of the Global and Regional Climate Models to reproduce the present-day climate. Due to the coarse resolution of global models, high-resolution regional studies are essential for impact studies and adaptation strategies in Ireland. Particularly, the representation of extreme events requires us to use high-resolution Regional Climate Models (RCMs). Moreover, the interaction between the atmosphere and ocean has to be included in RCMs in a more sophisticated way; this is especially important for accurately reproducing the climate over Ireland, which is surrounded by the Atlantic Ocean and Irish Sea. The RCA_NEMO model, an interactive flux coupled regional atmosphere-ocean model was developed in this study. This model, which combines two well-known components, the Rossby Center regional climate model (RCA) and the ocean model NEMO, together with the OASIS3 coupler, is fully parallel and can introduce the interaction between the atmosphere and ocean into climate simulations in a sophisticated manner. The model has been demonstrated to run long simulations (1960-1990) without flux correction. The monthly mean value between 1961 and 1990 is fully evaluated against analysis/observations. Mean sea level pressure, which is strongly associated with cyclone activity, has been reproduced well by both models, except in April. The atmosphere-only run has a weaker pressure gradient over Ireland. Comparing the output with the UKCIP observational data, the coupled model more accurately represents the climate of Ireland. Not only are the basic characteristics reproduced by the coupled run; the wet bias in the midlands and the dry bias in the southwest of Ireland are

  6. Using Students' Explanatory Models as Sources of Feedback: Conceptualizing Ocean Acidification and Its Impacts

    Science.gov (United States)

    Sezen-Barrie, A.; Stapleton, M.; Wolfson, J.

    2017-12-01

    This qualitative study focuses on students evidence-based explanatory models on how ocean acidification impacts oysters. Explanatory models are the crucial components of scientific endeavors as it helps scientists explain how the natural world functions and the reasons for the ways it functions. Moreover, these models assemble individual practices to understand how they work together to reach clear conclusions through scientific investigations. Due to their critical roles in making sense of authentic science, recent studies in science education suggest that these models should be part of the curriculum aligned with new science standards, i.e. Next Generation Science Standards, which stress the importance of engaging students in scientific practices. By collecting data from 400 secondary school students in Maryland, we aim to respond to the question: How can we use secondary school students' explanatory models to provide students with constructive feedback for more comprehensive learning of ocean acidification (the related evidence, causes and impact)? The data were analyzed through discourse analysis method. We highlighted and coded students' inscriptions (e.g., drawings, writings, and representations) that are signs of students' understanding (or lack thereof) of ocean acidification. These signs included explanations of pH levels, drawings of oyster growth, and inclusions of relevant data. The findings showed that the explanatory models can be critical forms of feedback as they reveal a) students' alternative conceptions on how ocean acidification impacts oysters or how acidification works in general; b) students' interpretations of oceans' (non)connectedness to Earth system; c) the choice of scientific representations and their sources; and d) the way students' integrate evidence or data from the investigations. Our work tackles an understanding of one of the most vital signs of modern climatic changes. Recent scientific evidence shows that if the change in ocean

  7. Surrogate based approaches to parameter inference in ocean models

    KAUST Repository

    Knio, Omar

    2016-01-06

    This talk discusses the inference of physical parameters using model surrogates. Attention is focused on the use of sampling schemes to build suitable representations of the dependence of the model response on uncertain input data. Non-intrusive spectral projections and regularized regressions are used for this purpose. A Bayesian inference formalism is then applied to update the uncertain inputs based on available measurements or observations. To perform the update, we consider two alternative approaches, based on the application of Markov Chain Monte Carlo methods or of adjoint-based optimization techniques. We outline the implementation of these techniques to infer dependence of wind drag, bottom drag, and internal mixing coefficients.

  8. Simulating the evolution of the Amundsen Sea Sector with a coupled ice-ocean model

    Science.gov (United States)

    Seroussi, H. L.; Nakayama, Y.; Menemenlis, D.; Larour, E. Y.; Morlighem, M.; Rignot, E. J.

    2017-12-01

    Ice shelves and floating glacier termini play an important role in the stability of ice sheets and interact strongly with the ocean. They account for much of the buttressing against the flow of inland glaciers that drain the Antarctic ice sheet. Changes in their geometry due to ice-front retreat, thinning or even collapse profoundly affect the flow of their tributary glaciers, which in turn affects the volume of grounded ice carried by these tributary glaciers into the ocean, and the extent of resulting sea level rise. Recent simulations of glaciers in Antarctica show that the largest climatic impact on ice dynamics is the rate of ice shelf melting, which rapidly affects glaciers' speed over several hundreds of kilometers upstream of the grounding line. These melting rates, however, as well as their spatial and temporal evolution remain largely unknown. In the absence of direct long-term observations, coupled ice-ocean models are the best available approach to address this question. In a previous study, we simulated the coupled ice-ocean system near Thwaites Glacier using a new two-way coupled system between the Massachusetts Institute of Technology general circulation model (MITgcm) and the Ice Sheet System Model (ISSM). Our results highlighted the impact of ocean conditions on glacier evolution and demonstrated the importance of simulating the coupled ice-ocean system to produce accurate melting rates under the ice shelf and at the grounding line. In this study, we focus on the entire Amundsen Sea sector, a region that experienced glacier acceleration, thinning and grounding line retreat over the past three decades. We investigate the feedbacks between changes in the ice and ocean, and the dynamic response of the glacier to changes in the ocean circulation. The simulations suggest that this region is likely to undergo substantial changes in the coming decades. This work was performed at the Jet Propulsion Laboratory, California Institute of Technology, under a

  9. Predicting Coupled Ocean-Atmosphere Modes with a Climate Modeling Hierarchy -- Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Michael Ghil, UCLA; Andrew W. Robertson, IRI, Columbia Univ.; Sergey Kravtsov, U. of Wisconsin, Milwaukee; Padhraic Smyth, UC Irvine

    2006-08-04

    The goal of the project was to determine midlatitude climate predictability associated with tropical-extratropical interactions on interannual-to-interdecadal time scales. Our strategy was to develop and test a hierarchy of climate models, bringing together large GCM-based climate models with simple fluid-dynamical coupled ocean-ice-atmosphere models, through the use of advanced probabilistic network (PN) models. PN models were used to develop a new diagnostic methodology for analyzing coupled ocean-atmosphere interactions in large climate simulations made with the NCAR Parallel Climate Model (PCM), and to make these tools user-friendly and available to other researchers. We focused on interactions between the tropics and extratropics through atmospheric teleconnections (the Hadley cell, Rossby waves and nonlinear circulation regimes) over both the North Atlantic and North Pacific, and the ocean’s thermohaline circulation (THC) in the Atlantic. We tested the hypothesis that variations in the strength of the THC alter sea surface temperatures in the tropical Atlantic, and that the latter influence the atmosphere in high latitudes through an atmospheric teleconnection, feeding back onto the THC. The PN model framework was used to mediate between the understanding gained with simplified primitive equations models and multi-century simulations made with the PCM. The project team is interdisciplinary and built on an existing synergy between atmospheric and ocean scientists at UCLA, computer scientists at UCI, and climate researchers at the IRI.

  10. Unstructured Orthogonal Meshes for Modeling Coastal and Ocean Flows

    NARCIS (Netherlands)

    Kleptsova, O.

    2013-01-01

    In this thesis a z?layer unstructured C-grid finite volume hydrostatic model is presented. An efficient and highly scalable implicit technique for the solution of the free surface equation is combined with an Eulerian approach for the advection of momentum. A consistent velocity reconstruc- tion

  11. Oceanic island biogeography through the lens of the general dynamic model

    DEFF Research Database (Denmark)

    Borregaard, Michael Krabbe; Amorim, Isabel R.; Borges, Paulo A. V.

    2017-01-01

    The general dynamic model of oceanic island biogeography (GDM) has added a new dimension to theoretical island biogeography in recognizing that geological processes are key drivers of the evolutionary processes of diversification and extinction within remote islands. It provides a dynamic...... and essentially non-equilibrium framework generating novel predictions for emergent diversity properties of oceanic islands and archipelagos. Its publication in 2008 coincided with, and spurred on, renewed attention to the dynamics of remote islands. We review progress, both in testing the GDM's predictions...... and in developing and enhancing ecological-evolutionary understanding of oceanic island systems through the lens of the GDM. In particular, we focus on four main themes: (i) macroecological tests using a space-for-time rationale; (ii) extensions of theory to islands following different patterns of ontogeny; (iii...

  12. The sensitivity of latent heat flux to the air humidity approximations used in ocean circulation models

    Science.gov (United States)

    Liu, W. Timothy; Niiler, Pearn P.

    1990-01-01

    In deriving the surface latent heat flux with the bulk formula for the thermal forcing of some ocean circulation models, two approximations are commonly made to bypass the use of atmospheric humidity in the formula. The first assumes a constant relative humidity, and the second supposes that the sea-air humidity difference varies linearly with the saturation humidity at sea surface temperature. Using climatological fields derived from the Marine Deck and long time series from ocean weather stations, the errors introduced by these two assumptions are examined. It is shown that the errors reach above 100 W/sq m over western boundary currents and 50 W/sq m over the tropical ocean. The two approximations also introduce erroneous seasonal and spatial variabilities with magnitudes over 50 percent of the observed variabilities.

  13. Reproduction of World Ocean Circulation by the CORE-II Scenario with the Models INMOM and INMIO

    Science.gov (United States)

    Volodin, E. M.; Gusev, A. V.; Diansky, N. A.; Ibrayev, R. A.; Ushakov, K. V.

    2018-01-01

    The results of simulations performed by the CORE-II scenario using the two Russian OGCMs, INMOM and INMIO, are presented. The models use different coordinate systems in the basic set of primitive equations and different numerical techniques. Both models are used as oceanic components of the INM RAS coupled models. Simulations have shown that reproducing ocean circulation using both models agrees with observations and simulations by other models. In general, the INMOM slightly underestimates the meridional heat transport in the ocean when compared to the INMIO model and climatic estimations. However, the INMIO yields a higher bias in temperature than the INMOM.

  14. Upper-Ocean Heat Balance Processes and the Walker Circulation in CMIP5 Model Projections

    Science.gov (United States)

    Robertson, F. R.; Roberts, J. B.; Funk, C.; Lyon, B.; Ricciardulli, L.

    2012-01-01

    Considerable uncertainty remains as to the importance of mechanisms governing decadal and longer variability of the Walker Circulation, its connection to the tropical climate system, and prospects for tropical climate change in the face of anthropogenic forcing. Most contemporary climate models suggest that in response to elevated CO2 and a warmer but more stratified atmosphere, the required upward mass flux in tropical convection will diminish along with the Walker component of the tropical mean circulation as well. Alternatively, there is also evidence to suggest that the shoaling and increased vertical stratification of the thermocline in the eastern Pacific will enable a muted SST increase there-- preserving or even enhancing some of the dynamical forcing for the Walker cell flow. Over the past decade there have been observational indications of an acceleration in near-surface easterlies, a strengthened Pacific zonal SST gradient, and globally-teleconnected dislocations in precipitation. But is this evidence in support of an ocean dynamical thermostat process posited to accompany anthropogenic forcing, or just residual decadal fluctuations associated with variations in warm and cold ENSO events and other stochastic forcing? From a modeling perspective we try to make headway on this question by examining zonal variations in surface energy fluxes and dynamics governing tropical upper ocean heat content evolution in the WCRP CMIP5 model projections. There is some diversity among model simulations; for example, the CCSM4 indicates net ocean warming over the IndoPacific region while the CSIRO model concentrates separate warming responses over the central Pacific and Indian Ocean regions. The models, as with observations, demonstrate strong local coupling between variations in column water vapor, downward surface longwave radiation and SST; but the spatial patterns of changes in the sign of this relationship differ among models and, for models as a whole, with

  15. Modeling of Oceanic Gas Hydrate Instability and Methane Release in Response to Climate Change

    Energy Technology Data Exchange (ETDEWEB)

    Reagan, Matthew; Reagan, Matthew T.; Moridis, George J.

    2008-04-15

    Paleooceanographic evidence has been used to postulate that methane from oceanic hydrates may have had a significant role in regulating global climate, implicating global oceanic deposits of methane gas hydrate as the main culprit in instances of rapid climate change that have occurred in the past. However, the behavior of contemporary oceanic methane hydrate deposits subjected to rapid temperature changes, like those predicted under future climate change scenarios, is poorly understood. To determine the fate of the carbon stored in these hydrates, we performed simulations of oceanic gas hydrate accumulations subjected to temperature changes at the seafloor and assessed the potential for methane release into the ocean. Our modeling analysis considered the properties of benthic sediments, the saturation and distribution of the hydrates, the ocean depth, the initial seafloor temperature, and for the first time, estimated the effect of benthic biogeochemical activity. The results show that shallow deposits--such as those found in arctic regions or in the Gulf of Mexico--can undergo rapid dissociation and produce significant methane fluxes of 2 to 13 mol/yr/m{sup 2} over a period of decades, and release up to 1,100 mol of methane per m{sup 2} of seafloor in a century. These fluxes may exceed the ability of the seafloor environment (via anaerobic oxidation of methane) to consume the released methane or sequester the carbon. These results will provide a source term to regional or global climate models in order to assess the coupling of gas hydrate deposits to changes in the global climate.

  16. Enabling Persistent Autonomy for Underwater Gliders with Ocean Model Predictions and Terrain Based Navigation

    Directory of Open Access Journals (Sweden)

    Andrew eStuntz

    2016-04-01

    Full Text Available Effective study of ocean processes requires sampling over the duration of long (weeks to months oscillation patterns. Such sampling requires persistent, autonomous underwater vehicles, that have a similarly long deployment duration. The spatiotemporal dynamics of the ocean environment, coupled with limited communication capabilities, make navigation and localization difficult, especially in coastal regions where the majority of interesting phenomena occur. In this paper, we consider the combination of two methods for reducing navigation and localization error; a predictive approach based on ocean model predictions and a prior information approach derived from terrain-based navigation. The motivation for this work is not only for real-time state estimation, but also for accurately reconstructing the actual path that the vehicle traversed to contextualize the gathered data, with respect to the science question at hand. We present an application for the practical use of priors and predictions for large-scale ocean sampling. This combined approach builds upon previous works by the authors, and accurately localizes the traversed path of an underwater glider over long-duration, ocean deployments. The proposed method takes advantage of the reliable, short-term predictions of an ocean model, and the utility of priors used in terrain-based navigation over areas of significant bathymetric relief to bound uncertainty error in dead-reckoning navigation. This method improves upon our previously published works by 1 demonstrating the utility of our terrain-based navigation method with multiple field trials, and 2 presenting a hybrid algorithm that combines both approaches to bound navigational error and uncertainty for long-term deployments of underwater vehicles. We demonstrate the approach by examining data from actual field trials with autonomous underwater gliders, and demonstrate an ability to estimate geographical location of an underwater glider to 2

  17. Integrating Environmental Optics into Multidisciplinary, Predictive Models of Ocean Dynamics

    Science.gov (United States)

    2011-09-30

    Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 2 New modeling system – The photosynthetic pigment chlorophyll a plays a pivotal role in...directly supported. This research program was an extension of a long collaboration with Marlon Lewis coordinated through the NSERC/Satlantic Industrial ...the C-MORE summer course in Microbial Oceanography at the University of Hawaii (Cullen 2011). RESULTS Analysis of an extensive set of optical

  18. Risks to coral reefs from ocean carbonate chemistry changes in recent earth system model projections

    International Nuclear Information System (INIS)

    Ricke, K L; Caldeira, K; Orr, J C; Schneider, K

    2013-01-01

    Coral reefs are among the most biodiverse ecosystems in the world. Today they are threatened by numerous stressors, including warming ocean waters and coastal pollution. Here we focus on the implications of ocean acidification for the open ocean chemistry surrounding coral reefs, as estimated from earth system models participating in the Coupled Model Intercomparison Project, Phase 5 (CMIP5). We project risks to reefs in the context of three potential aragonite saturation (Ωa) thresholds. We find that in preindustrial times, 99.9% of reefs adjacent to open ocean in the CMIP5 ensemble were located in regions with Ωa > 3.5. Under a business-as-usual scenario (RCP 8.5), every coral reef considered will be surrounded by water with Ωa 2 emissions abatement, the Ωa threshold for reefs is critical to projecting their fate. Our results indicate that to maintain a majority of reefs surrounded by waters with Ωa > 3.5 to the end of the century, very aggressive reductions in emissions are required. The spread of Ωa projections across models in the CMIP5 ensemble is narrow, justifying a high level of confidence in these results. (letter)

  19. Impact of Langmuir Turbulence on Upper Ocean Response to Hurricane Edouard: Model and Observations

    Science.gov (United States)

    Blair, A.; Ginis, I.; Hara, T.; Ulhorn, E.

    2017-12-01

    Tropical cyclone intensity is strongly affected by the air-sea heat flux beneath the storm. When strong storm winds enhance upper ocean turbulent mixing and entrainment of colder water from below the thermocline, the resulting sea surface temperature cooling may reduce the heat flux to the storm and weaken the storm. Recent studies suggest that this upper ocean turbulence is strongly affected by different sea states (Langmuir turbulence), which are highly complex and variable in tropical cyclone conditions. In this study, the upper ocean response under Hurricane Edouard (2014) is investigated using a coupled ocean-wave model with and without an explicit sea state dependent Langmuir turbulence parameterization. The results are compared with in situ observations of sea surface temperature and mixed layer depth from AXBTs, as well as satellite sea surface temperature observations. Overall, the model results of mixed layer deepening and sea surface temperature cooling under and behind the storm are consistent with observations. The model results show that the effects of sea state dependent Langmuir turbulence can be significant, particularly on the mixed layer depth evolution. Although available observations are not sufficient to confirm such effects, some observed trends suggest that the sea state dependent parameterization might be more accurate than the traditional (sea state independent) parameterization.

  20. Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS: fieldwork, synthesis and modelling efforts

    Directory of Open Access Journals (Sweden)

    Richard John Sanders

    2016-08-01

    Full Text Available The ocean’s biological carbon pump plays a central role in regulating atmospheric CO2 levels. In particular, the depth at which sinking organic carbon is broken down and respired in the mesopelagic zone is critical, with deeper remineralisation resulting in greater carbon storage. Until recently, however, a balanced budget of the supply and consumption of organic carbon in the mesopelagic had not been constructed in any region of the ocean, and the processes controlling organic carbon turnover are still poorly understood. Large-scale data syntheses suggest that a wide range of factors can influence remineralisation depth including upper-ocean ecological interactions, and interior dissolved oxygen concentration and temperature. However these analyses do not provide a mechanistic understanding of remineralisation, which increases the challenge of appropriately modelling the mesopelagic carbon dynamics. In light of this, the UK Natural Environment Research Council has funded a programme with this mechanistic understanding as its aim, drawing targeted fieldwork right through to implementation of a new parameterisation for mesopelagic remineralisation within an IPCC class global biogeochemical model. The Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS programme will deliver new insights into the processes of carbon cycling in the mesopelagic zone and how these influence ocean carbon storage. Here we outline the programme’s rationale, its goals, planned fieldwork and modelling activities, with the aim of stimulating international collaboration.

  1. Propagation modeling of ocean-scattered low-elevation GPS signals for maritime tropospheric duct inversion

    International Nuclear Information System (INIS)

    Zhang Jin-Peng; Wu Zhen-Sen; Zhao Zhen-Wei; Zhang Yu-Sheng; Wang Bo

    2012-01-01

    The maritime tropospheric duct is a low-altitude anomalous refractivity structure over the ocean surface, and it can significantly affect the performance of many shore-based/shipboard radar and communication systems. We propose the idea that maritime tropospheric ducts can be retrieved from ocean forward-scattered low-elevation global positioning system (GPS) signals. Retrieval is accomplished by matching the measured power patterns of the signals to those predicted by the forward propagation model as a function of the modified refractivity profile. On the basis of a parabolic equation method and bistatic radar equation, we develop such a forward model for computing the trapped propagation characteristics of an ocean forward-scattered GPS signal within a tropospheric duct. A new GPS scattering initial field is defined for this model to start the propagation modeling. A preliminary test on the performance of this model is conducted using measured data obtained from a 2009-experiment in the South China Sea. Results demonstrate that this model can predict GPS propagation characteristics within maritime tropospheric ducts and serve as a forward model for duct inversion

  2. Stability Analysis of Numerical Methods for a 1.5-Layer Shallow-Water Ocean Model

    Directory of Open Access Journals (Sweden)

    Guang-an Zou

    2013-01-01

    Full Text Available A 1.5-layer reduced-gravity shallow-water ocean model in spherical coordinates is described and discretized in a staggered grid (standard Arakawa C-grid with the forward-time central-space (FTCS method and the Leap-frog finite difference scheme. The discrete Fourier analysis method combined with the Gershgorin circle theorem is used to study the stability of these two finite difference numerical models. A series of necessary conditions of selection criteria for the time-space step sizes and model parameters are obtained. It is showed that these stability conditions are more accurate than the Courant-Friedrichs-Lewy (CFL condition and other two criterions (Blumberg and Mellor, 1987; Casulli, 1990, 1992. Numerical experiments are proposed to test our stability results, and numerical model that is designed is also used to simulate the ocean current.

  3. Modeling Ocean-Forced Changes in Smith Glacier

    Science.gov (United States)

    Lilien, D.; Joughin, I. R.; Smith, B. E.

    2014-12-01

    Glaciers along the Amundsen Coast are changing rapidly, which has drawn substantial scientific and public attention. Modeling and observation suggest warm-water intrusion and consequent melting as the cause of observed changes, and that unstoppable retreat may have already been triggered in some drainages. While Pine Island and Thwaites Glaciers are losing the most mass and have been the predominant objects study, other systems, particularly Smith, Pope and Kohler Glaciers and the corresponding Dotson and Crosson Shelves, are changing more rapidly relative to their size. Though smaller, these glaciers still have potentially large implications for overall regional dynamics as their beds connect below sea level to surrounding basins. In particular, the long, deep trough of Smith Glacier nearly links to the large eastern tributary of Thwaites, potentially causing rapid changes of Smith to have significant impact on the continuing retreat of Thwaites.We implemented a numerical model in Elmer/Ice, an open-source, full-Stokes, finite-element software package, to investigate the response of the Smith/Pope/Kohler system to different initial conditions. We use various parameterizations of sub-shelf melting with constant magnitude to examine the sensitivity of overall dynamics to melt distribution. Because melt distribution affects lateral buttressing and upstream grounded areas, it is potentially an important control on ice shelf and outlet glacier dynamics. Through comparison to the most recent velocity data, we evaluate the ability of differing melt parameterizations to reproduce the behavior currently seen in Smith/Pope/Kohler glaciers. In addition, we investigate the effect of using different years of velocity data with constant elevation input when initiating model runs. By comparing results over the satellite record to initiation with synchronous observations, we assess the accuracy of the often necessary practice of using differently timestamped datasets.

  4. Closing the Seasonal Ocean Surface Temperature Balance in the Eastern Tropical Oceans from Remote Sensing and Model Reanalyses

    Science.gov (United States)

    Roberts, J. Brent; Clayson, C. A.

    2012-01-01

    Residual forcing necessary to close the MLTB on seasonal time scales are largest in regions of strongest surface heat flux forcing. Identifying the dominant source of error - surface heat flux error, mixed layer depth estimation, ocean dynamical forcing - remains a challenge in the eastern tropical oceans where ocean processes are very active. Improved sub-surface observations are necessary to better constrain errors. 1. Mixed layer depth evolution is critical to the seasonal evolution of mixed layer temperatures. It determines the inertia of the mixed layer, and scales the sensitivity of the MLTB to errors in surface heat flux and ocean dynamical forcing. This role produces timing impacts for errors in SST prediction. 2. Errors in the MLTB are larger than the historical 10Wm-2 target accuracy. In some regions, a larger accuracy can be tolerated if the goal is to resolve the seasonal SST cycle.

  5. Oceanic sources of predictability for MJO propagation across the Maritime Continent in a subset of S2S forecast models

    Science.gov (United States)

    DeMott, C. A.; Klingaman, N. P.

    2017-12-01

    Skillful prediction of the Madden-Julian oscillation (MJO) passage across the Maritime Continent (MC) has important implications for global forecasts of high-impact weather events, such as atmospheric rivers and heat waves. The North American teleconnection response to the MJO is strongest when MJO convection is located in the western Pacific Ocean, but many climate and forecast models are deficient in their simulation of MC-crossing MJO events. Compared to atmosphere-only general circulation models (AGCMs), MJO simulation skill generally improves with the addition of ocean feedbacks in coupled GCMs (CGCMs). Using observations, previous studies have noted that the degree of ocean coupling may vary considerably from one MJO event to the next. The coupling mechanisms may be linked to the presence of ocean Equatorial Rossby waves, the sign and amplitude of Equatorial surface currents, and the upper ocean temperature and salinity profiles. In this study, we assess the role of ocean feedbacks to MJO prediction skill using a subset of CGCMs participating in the Subseasonal-to-Seasonal (S2S) Project database. Oceanic observational and reanalysis datasets are used to characterize the upper ocean background state for observed MJO events that do and do not propagate beyond the MC. The ability of forecast models to capture the oceanic influence on the MJO is first assessed by quantifying SST forecast skill. Next, a set of previously developed air-sea interaction diagnostics is applied to model output to measure the role of SST perturbations on the forecast MJO. The "SST effect" in forecast MJO events is compared to that obtained from reanalysis data. Leveraging all ensemble members of a given forecast helps disentangle oceanic model biases from atmospheric model biases, both of which can influence the expression of ocean feedbacks in coupled forecast systems. Results of this study will help identify areas of needed model improvement for improved MJO forecasts.

  6. Assessing data assimilation and model boundary error strategies for high resolution ocean model downscaling in the Northern North Sea

    Science.gov (United States)

    Sandvig Mariegaard, Jesper; Huiban, Méven Robin; Tornfeldt Sørensen, Jacob; Andersson, Henrik

    2017-04-01

    Determining the optimal domain size and associated position of open boundaries in local high-resolution downscaling ocean models is often difficult. As an important input data set for downscaling ocean modelling, the European Copernicus Marine Environment Monitoring Service (CMEMS) provides baroclinic initial and boundary conditions for local ocean models. Tidal dynamics is often neglected in CMEMS services at large scale but tides are generally crucial for coastal ocean dynamics. To address this need, tides can be superposed via Flather (1976) boundary conditions and the combined flow downscaled using unstructured mesh. The surge component is also only partially represented in selected CMEMS products and must be modelled inside the domain and modelled independently and superposed if the domain becomes too small to model the effect in the downscaling model. The tide and surge components can generally be improved by assimilating water level from tide gauge and altimetry data. An intrinsic part of the problem is to find the limitations of local scale data assimilation and the requirement for consistency between the larger scale ocean models and the local scale assimilation methodologies. This contribution investigates the impact of domain size and associated positions of open boundaries with and without data assimilation of water level. We have used the baroclinic ocean model, MIKE 3 FM, and its newly re-factored built-in data assimilation package. We consider boundary conditions of salinity, temperature, water level and depth varying currents from the Global CMEMS 1/4 degree resolution model from 2011, where in situ ADCP velocity data is available for validation. We apply data assimilation of in-situ tide gauge water levels and along track altimetry surface elevation data from selected satellites. The MIKE 3 FM data assimilation model which use the Ensemble Kalman filter have recently been parallelized with MPI allowing for much larger applications running on HPC

  7. Roles of wind stress and thermodynamic forcing in recent trends in Antarctic sea ice and Southern Ocean SST: An ocean-sea ice model study

    Science.gov (United States)

    Kusahara, Kazuya; Williams, Guy D.; Massom, Robert; Reid, Phillip; Hasumi, Hiroyasu

    2017-11-01

    In contrast to a strong decrease in Arctic sea ice extent, overall Antarctic sea ice extent has modestly increased since 1979. Several hypotheses have been proposed for the net Antarctic sea ice expansion, including atmosphere/ocean circulation and temperature changes, sea ice-atmospheric-ocean feedback, increased precipitation, and enhanced basal meltwater from ice shelves. Concomitant with this positive trend in Antarctic sea ice, sea surface temperatures (SSTs) over the Southern Ocean south of approximately 45°S have cooled over this period. However, the mechanisms responsible for the Antarctic sea ice expansion and the SST cooling trend remain poorly defined. Here, we conduct comprehensive sensitivity experiments using a coupled ocean-sea ice model with a steady-state ice shelf component in order to investigate the main drivers of recent trends in Antarctic sea ice and SST over the Southern Ocean. The results suggest that Antarctic sea ice expansion is mostly explained by trends in the thermodynamic surface forcing, notably cooling and drying and a reduction in longwave radiation. Similarly, thermodynamic forcing is found to be the main driver of the zonal SST cooling trend. While apparently less influential on sea ice extent and SST, wind stress plays a key role in sea ice motion, thickening coastal sea ice, and thinning and decreasing the concentration of ice in mid-pack regions of the Amundsen-eastern Ross seas and 65-95°E in winter-spring. Furthermore, the model suggests that ocean-ice shelf interaction does not significantly influence the observed trends in Antarctic sea ice coverage and Southern Ocean SST in recent decades.

  8. A POD reduced order unstructured mesh ocean modelling method for moderate Reynolds number flows

    Science.gov (United States)

    Fang, F.; Pain, C. C.; Navon, I. M.; Gorman, G. J.; Piggott, M. D.; Allison, P. A.; Farrell, P. E.; Goddard, A. J. H.

    Herein a new approach to enhance the accuracy of a novel Proper Orthogonal Decomposition (POD) model applied to moderate Reynolds number flows (of the type typically encountered in ocean models) is presented. This approach develops the POD model of Fang et al. [Fang, F., Pain, C.C., Navon, I.M., Piggott, M.D., Gorman, G.J., Allison, P., Goddard, A.J.H., 2008. Reduced-order modelling of an adaptive mesh ocean model. International Journal for Numerical Methods in Fluids. doi:10.1002/fld.1841] used in conjunction with the Imperial College Ocean Model (ICOM), an adaptive, non-hydrostatic finite element model. Both the velocity and vorticity results of the POD reduced order model (ROM) exhibit an overall good agreement with those obtained from the full model. The accuracy of the POD-Galerkin model with the use of adaptive meshes is first evaluated using the Munk gyre flow test case with Reynolds numbers ranging between 400 and 2000. POD models using the L2 norm become oscillatory when the Reynolds number exceeds Re=400. This is because the low-order truncation of the POD basis inhibits generally all the transfers between the large and the small (unresolved) scales of the fluid flow. Accuracy is improved by using the H1 POD projector in preference to the L2 POD projector. The POD bases are constructed by incorporating gradients as well as function values in the H1 Sobolev norm. The accuracy of numerical results is further enhanced by increasing the number of snapshots and POD bases. Error estimation was used to assess the effect of truncation (involved in the POD-Galerkin approach) when adaptive meshes are used in conjunction with POD/ROM. The RMSE of velocity results between the full model and POD-Galerkin model is reduced by as much as 50% by using the H1 norm and increasing the number of snapshots and POD bases.

  9. Thermal Models of the Ocean Floor: from Wegener to Cerro Prieto

    Science.gov (United States)

    Sclater, J. G.; Negrete-Aranda, R.

    2017-12-01

    Wegener (1925) argued that hot rock could explain the shallower depths of ridges in the center of the Atlantic Ocean. Hess (1963) proposed that the intrusion of molten rock occurred at a world encircling mid-ocean ridge system. However, he accounted for the elevation of the ridges by the formation of serpentinite and thermal convection. Langseth et al. (1966) provided the major advance by using a 100 km thick plate to argue such a concept could not explain the depth, heat flow versus distance relations. They had the correct model but misinterpreted the data. Reformulating theoretically, McKenzie (1967) created the generally accepted thermal model for the ocean floor. Unfortunately, in attempting to match erroneously low heat flow data, he used a 50 km thick plate. Addition of the effect of water and the realization of the importance of advective flow, enabled various groups to create thermal plate models that accounted for the heat flow and depth age relations. From this came the understanding of hydrothermal circulation in the oceanic crust, the thermal boundary layer concept of the oceanic plate and the realization that all thermal models differed only in the way the different groups had chosen to analyze the data. During the past 40 years many have applied similar concepts to continental margins: (1) Measurement of subsidence of the Atlantic margin, continental stretching and a Time Temperature, Depth and Maturation analysis of continental basins have created the field of Basin Analysis; (2) Changes in heat flow at ocean continent boundaries have determined the position of the transition and (3) In attempting to examine the ocean continent transition process in the northernmost basin of the Gulf of California, Neumann et al (in press) observed conductive heat flow values greater than 0.75 Watts, at a depth of < 150 m, along a 10 km section of a profile across the southern extension of the Cerro Prieto fault. The magnitude of these values overwhelms local

  10. Association between mean and interannual equatorial Indian Ocean subsurface temperature bias in a coupled model

    Science.gov (United States)

    Srinivas, G.; Chowdary, Jasti S.; Gnanaseelan, C.; Prasad, K. V. S. R.; Karmakar, Ananya; Parekh, Anant

    2018-03-01

    In the present study the association between mean and interannual subsurface temperature bias over the equatorial Indian Ocean (EIO) is investigated during boreal summer (June through September; JJAS) in the National Centers for Environmental Prediction (NCEP) Climate Forecast System (CFSv2) hindcast. Anomalously high subsurface warm bias (greater than 3 °C) over the eastern EIO (EEIO) region is noted in CFSv2 during summer, which is higher compared to other parts of the tropical Indian Ocean. Prominent eastward current bias in the upper 100 m over the EIO region induced by anomalous westerly winds is primarily responsible for subsurface temperature bias. The eastward currents transport warm water to the EEIO and is pushed down to subsurface due to downwelling. Thus biases in both horizontal and vertical currents over the EIO region support subsurface warm bias. The evolution of systematic subsurface warm bias in the model shows strong interannual variability. These maximum subsurface warming episodes over the EEIO are mainly associated with La Niña like forcing. Strong convergence of low level winds over the EEIO and Maritime continent enhanced the westerly wind bias over the EIO during maximum warming years. This low level convergence of wind is induced by the bias in the gradient in the mean sea level pressure with positive bias over western EIO and negative bias over EEIO and parts of western Pacific. Consequently, changes in the atmospheric circulation associated with La Niña like conditions affected the ocean dynamics by modulating the current bias thereby enhancing the subsurface warm bias over the EEIO. It is identified that EEIO subsurface warming is stronger when La Niña co-occurred with negative Indian Ocean Dipole events as compared to La Niña only years in the model. Ocean general circulation model (OGCM) experiments forced with CFSv2 winds clearly support our hypothesis that ocean dynamics influenced by westerly winds bias is primarily

  11. Influence of coupling on atmosphere, sea ice and ocean regional models in the Ross Sea sector, Antarctica

    Energy Technology Data Exchange (ETDEWEB)

    Jourdain, Nicolas C. [LGGE, UMR 5183, CNRS-UJF, Grenoble (France); LEGI, UMR 5519, CNRS-UJF-INPG, Grenoble (France); Mathiot, Pierre; Barnier, Bernard [LEGI, UMR 5519, CNRS-UJF-INPG, Grenoble (France); Gallee, Hubert [LGGE, UMR 5183, CNRS-UJF, Grenoble (France)

    2011-04-15

    Air-sea ice-ocean interactions in the Ross Sea sector form dense waters that feed the global thermohaline circulation. In this paper, we develop the new limited-area ocean-sea ice-atmosphere coupled model TANGO to simulate the Ross Sea sector. TANGO is built up by coupling the atmospheric limited-area model MAR to a regional configuration of the ocean-sea ice model NEMO. A method is then developed to identify the mechanisms by which local coupling affects the simulations. TANGO is shown to simulate realistic sea ice properties and atmospheric surface temperatures. These skills are mostly related to the skills of the stand alone atmospheric and oceanic models used to build TANGO. Nonetheless, air temperatures over ocean and winter sea ice thickness are found to be slightly improved in coupled simulations as compared to standard stand alone ones. Local atmosphere ocean feedbacks over the open ocean are found to significantly influence ocean temperature and salinity. In a stand alone ocean configuration, the dry and cold air produces an ocean cooling through sensible and latent heat loss. In a coupled configuration, the atmosphere is in turn moistened and warmed by the ocean; sensible and latent heat loss is therefore reduced as compared to the stand alone simulations. The atmosphere is found to be less sensitive to local feedbacks than the ocean. Effects of local feedbacks are increased in the coastal area because of the presence of sea ice. It is suggested that slow heat conduction within sea ice could amplify the feedbacks. These local feedbacks result in less sea ice production in polynyas in coupled mode, with a subsequent reduction in deep water formation. (orig.)

  12. Gravity crustal models and heat flow measurements for the Eurasia Basin, Arctic Ocean

    Science.gov (United States)

    Urlaub, Morelia; Schmidt-Aursch, Mechita C.; Jokat, Wilfried; Kaul, Norbert

    2009-12-01

    The Gakkel Ridge in the Arctic Ocean with its adjacent Nansen and Amundsen Basins is a key region for the study of mantle melting and crustal generation at ultraslow spreading rates. We use free-air gravity anomalies in combination with seismic reflection and wide-angle data to compute 2-D crustal models for the Nansen and Amundsen Basins in the Arctic Ocean. Despite the permanent pack-ice cover two geophysical transects cross both entire basins. This means that the complete basin geometry of the world’s slowest spreading system can be analysed in detail for the first time. Applying standard densities for the sediments and oceanic crystalline crust, the gravity models reveal an unexpected heterogeneous mantle with densities of 3.30 × 103, 3.20 × 103 and 3.10 × 103 kg/m3 near the Gakkel Ridge. We interpret that the upper mantle heterogeneity mainly results from serpentinisation and thermal effects. The thickness of the oceanic crust is highly variable throughout both transects. Crustal thickness of less than 1 km dominates in the oldest parts of both basins, increasing to a maximum value of 6 km near the Gakkel Ridge. Along-axis heat flow is highly variable and heat flow amplitudes resemble those observed at fast or intermediate spreading ridges. Unexpectedly, high heat flow along the Amundsen transect exceeds predicted values from global cooling curves by more than 100%.

  13. Radiative transfer modeling through terrestrial atmosphere and ocean accounting for inelastic processes: Software package SCIATRAN

    Science.gov (United States)

    Rozanov, V. V.; Dinter, T.; Rozanov, A. V.; Wolanin, A.; Bracher, A.; Burrows, J. P.

    2017-06-01

    SCIATRAN is a comprehensive software package which is designed to model radiative transfer processes in the terrestrial atmosphere and ocean in the spectral range from the ultraviolet to the thermal infrared (0.18-40 μm). It accounts for multiple scattering processes, polarization, thermal emission and ocean-atmosphere coupling. The main goal of this paper is to present a recently developed version of SCIATRAN which takes into account accurately inelastic radiative processes in both the atmosphere and the ocean. In the scalar version of the coupled ocean-atmosphere radiative transfer solver presented by Rozanov et al. [61] we have implemented the simulation of the rotational Raman scattering, vibrational Raman scattering, chlorophyll and colored dissolved organic matter fluorescence. In this paper we discuss and explain the numerical methods used in SCIATRAN to solve the scalar radiative transfer equation including trans-spectral processes, and demonstrate how some selected radiative transfer problems are solved using the SCIATRAN package. In addition we present selected comparisons of SCIATRAN simulations with those published benchmark results, independent radiative transfer models, and various measurements from satellite, ground-based, and ship-borne instruments. The extended SCIATRAN software package along with a detailed User's Guide is made available for scientists and students, who are undertaking their own research typically at universities, via the web page of the Institute of Environmental Physics (IUP), University of Bremen: http://www.iup.physik.uni-bremen.de.

  14. Underwater glider observations and modeling of an abrupt mixing event in the upper ocean

    Science.gov (United States)

    Ruiz, S.; Renault, L.; Garau, B.; Tintoré, J.

    2012-04-01

    An abrupt mixing event in the upper ocean is investigated in the Northwestern Mediterranean Sea using gliders, a new ocean monitoring technology, combined with regional atmospheric model outputs and mooring data. Intense winds (up to 20 m s-1) and buoyancy forcing during December 2009 induced strong vertical mixing of the upper ocean layer in the Balearic Sea. High-resolution data from a coastal glider reveal a surface cooling of near 2 ° C and the deepening of the Mixed Layer Depth (MLD) by more than 40 meters in the center of the basin. Comparisons between glider and ship-emulated sections of hydrographic profiles show that the glider data make visible the small-scale spatial variability of the MLD. The heat content released to the atmosphere by the upper ocean during this mixing event exceeds 1000 W m-2. A simulation from the Weather Research and Forecasting model reports values consistent with these observations. Additionally the atmospheric numerical simulation shows the development and evolution of a cyclone located south of the Balearic Islands. This cyclone is likely to be responsible for the wind intensification and the consequent air-sea energy exchanges that occurred in the study area during this period.

  15. Operational use of high-resolution sst in a coupled sea ice-ocean model

    Science.gov (United States)

    Albretsen, A.

    2003-04-01

    A high-latitude, near real time, sea surface temperature (SST) product with 10 km resolution is developed at the Norwegian Meteorological Institute (met.no) through the EUMETSAT project OSI-SAF (Ocean and Sea Ice Satellite Application Facility). The product covers the Atlantic Ocean from 50N to 90N and is produced twice daily. A digitized SST and sea ice map is produced manually once a week at the Ice Mapping Service at met.no using all available information from the previous week. This map is the basis for a daily SST analysis, in which the most recent OSI-SAF SST products are successively overlaid. The resulting SST analysis field is then used in a simple data assimilation scheme in a coupled ice-ocean model to perform daily 10 days forecasts of ocean and sea ice variables. Also, the associated OSI-SAF sea ice concentration product, built from different polar orbiting satellites, is assimilated into the sea ice model. Preliminary estimates of impact on forecast skill and error statistics will be presented.

  16. Iron-light colimitation in a global ocean biogeochemical model and the sensitivity of oceanic CO2 uptake to dust deposition

    Science.gov (United States)

    Nickelsen, L.; Oschlies, A.

    2012-12-01

    The iron hypothesis of glacial-interglacial cycles states that glacial increases in the deposition of dust enhanced the concentrations of the micronutrient iron in the ocean where it triggered phytoplankton growth and thus CO2 uptake. Indeed, iron fertilization experiments find that phytoplankton needs iron in particular for nitrate uptake, light harvesting, synthesis of chlorophyll and in the electron transport chain of photosynthesis. Previous global biogeochemical models used to extrapolate results from local culture and field experiments have suggested that the sensitivity of ocean biogeochemistry to changes in dust deposition is too low to account for the observed glacial-interglacial changes of atmospheric CO2 concentrations. Here we show that this sensitivity is increased significantly when iron-light colimitation, i.e. the impact of iron on light harvesting capabilities and chlorophyll synthesis, is explicitly considered in a global biogeochemical ocean model. Iron-light colimitation increases the shift of export production to higher latitudes at high dust deposition and amplifies iron limitation at low dust deposition. Our results suggest that iron fertilization by increased dust deposition may explain a substantially larger portion of the observed past CO2 variability than thought previously. Our results emphasize the role of iron as a key limiting nutrient for phytoplankton in the ocean, with a high potential for changes in oceanic iron supply affecting the global carbon cycle and climate.

  17. Modeling the response of Northwest Greenland to enhanced ocean thermal forcing and subglacial discharge

    Science.gov (United States)

    Morlighem, M.; Wood, M.; Seroussi, H. L.; Bondzio, J. H.; Rignot, E. J.

    2017-12-01

    Glacier-front dynamics is an important control on Greenland's ice mass balance. Warm and salty Atlantic water, which is typically found at a depth below 200-300 m, has the potential to trigger ice-front retreats of marine-terminating glaciers, and the corresponding loss in resistive stress leads to glacier acceleration and thinning. It remains unclear, however, which glaciers are currently stable but may retreat in the future, and how far inland and how fast they will retreat. Here, we quantify the sensitivity and vulnerability of marine-terminating glaciers along the Northwest coast of Greenland (from 72.5° to 76°N) to ocean forcing using the Ice Sheet System Model (ISSM), and its new ice front migration capability. We rely on the ice melt parameterization from Rignot et al. 2016, and use ocean temperature and salinity from high-resolution ECCO2 simulations on the continental shelf to constrain the thermal forcing. The ice flow model includes a calving law based on a Von Mises criterion. We investigate the sensitivity of Northwest Greenland to enhanced ocean thermal forcing and subglacial discharge. We find that some glaciers, such as Dietrichson Gletscher or Alison Gletscher, are sensitive to small increases in ocean thermal forcing, while others, such as Illullip Sermia or Qeqertarsuup Sermia, are very difficult to destabilize, even with a quadrupling of the melt. Under the most intense melt experiment, we find that Hayes Gletscher retreats by more than 50 km inland into a deep trough and its velocity increases by a factor of 10 over only 15 years. The model confirms that ice-ocean interactions are the triggering mechanism of glacier retreat, but the bed controls its magnitude. This work was performed at the University of California Irvine under a contract with the National Aeronautics and Space Administration, Cryospheric Sciences Program (#NNX15AD55G), and the National Science Foundation's ARCSS program (#1504230).

  18. A simple mathematical model to predict sea surface temperature over the northwest Indian Ocean

    Science.gov (United States)

    Noori, Roohollah; Abbasi, Mahmud Reza; Adamowski, Jan Franklin; Dehghani, Majid

    2017-10-01

    A novel and simple mathematical model was developed in this study to enhance the capacity of a reduced-order model based on eigenvectors (RMEV) to predict sea surface temperature (SST) in the northwest portion of the Indian Ocean, including the Persian and Oman Gulfs and Arabian Sea. Developed using only the first two of 12,416 possible modes, the enhanced RMEV closely matched observed daily optimum interpolation SST (DOISST) values. Spatial distribution of the first mode indicated the greatest variations in DOISST occurred in the Persian Gulf. Also, the slightly increasing trend in the temporal component of the first mode observed in the study area over the last 34 years properly reflected the impact of climate change and rising DOISST. Given its simplicity and high level of accuracy, the enhanced RMEV can be applied to forecast DOISST in oceans, which the poor forecasting performance and large computational-time of other numerical models may not allow.

  19. Coupled Atmosphere-Wave-Ocean Modeling of Tropical Cyclones: Progress, Challenges, and Ways Forward

    Science.gov (United States)

    Chen, Shuyi

    2015-04-01

    It has long been recognized that air-sea interaction plays an important role in tropical cyclones (TC) intensity change. However, most current numerical weather prediction (NWP) models are deficient in predicting TC intensity. The extreme high winds, intense rainfall, large ocean waves, and copious sea spray in TCs push the surface-exchange parameters for temperature, water vapor, and momentum into untested regimes. Parameterizations of air-sea fluxes in NWP models are often crude and create "manmade" energy source/sink that does not exist, especially in the absence of a fully interactive ocean in the model. The erroneous surface heat, moisture, and momentum fluxes can cause compounding errors in the model (e.g., precipitation, water vapor, boundary layer properties). The energy source (heat and moisture fluxes from the ocean) and sink (surface friction and wind-induced upper ocean cooling) are critical to TC intensity. However, observations of air-sea fluxes in TCs are very limited, especially in extreme high wind conditions underneath of the eyewall region. The Coupled Boundary Layer Air-Sea Transfer (CBLAST) program was designed to better understand the air-sea interaction, especially in high wind conditions, which included laboratory and coupled model experiments and field campaign in 2003-04 hurricane seasons. Significant progress has been made in better understanding of air-sea exchange coefficients up to 30 m/s, i.e., a leveling off in drag coefficient and relatively invariant exchange coefficient of enthalpy with wind speed. More recently, the Impact of Typhoon on the Ocean in the Pacific (ITOP) field campaign in 2010 has provided an unprecedented data set to study the air-sea fluxes in TCs and their impact on TC structure and intensity. More than 800 GPS dropsondes and 900 AXBTs/AXCTs as well as drifters, floats, and moorings were deployed in TCs, including Typhoons Fanapi and Malakas, and Supertyphoon Megi with a record peak wind speed of more than 80 m

  20. Ocean-atmosphere dynamics during Hurricane Ida and Nor'Ida: An application of the coupled ocean-atmosphere-wave-sediment transport (COAWST) modeling system

    Science.gov (United States)

    Olabarrieta, Maitane; Warner, John C.; Armstrong, Brandy N.; Zambon, Joseph B.; He, Ruoying

    2012-01-01

    The coupled ocean–atmosphere–wave–sediment transport (COAWST) modeling system was used to investigate atmosphere–ocean–wave interactions in November 2009 during Hurricane Ida and its subsequent evolution to Nor’Ida, which was one of the most costly storm systems of the past two decades. One interesting aspect of this event is that it included two unique atmospheric extreme conditions, a hurricane and a nor’easter storm, which developed in regions with different oceanographic characteristics. Our modeled results were compared with several data sources, including GOES satellite infrared data, JASON-1 and JASON-2 altimeter data, CODAR measurements, and wave and tidal information from the National Data Buoy Center (NDBC) and the National Tidal Database. By performing a series of numerical runs, we were able to isolate the effect of the interaction terms between the atmosphere (modeled with Weather Research and Forecasting, the WRF model), the ocean (modeled with Regional Ocean Modeling System (ROMS)), and the wave propagation and generation model (modeled with Simulating Waves Nearshore (SWAN)). Special attention was given to the role of the ocean surface roughness. Three different ocean roughness closure models were analyzed: DGHQ (which is based on wave age), TY2001 (which is based on wave steepness), and OOST (which considers both the effects of wave age and steepness). Including the ocean roughness in the atmospheric module improved the wind intensity estimation and therefore also the wind waves, surface currents, and storm surge amplitude. For example, during the passage of Hurricane Ida through the Gulf of Mexico, the wind speeds were reduced due to wave-induced ocean roughness, resulting in better agreement with the measured winds. During Nor’Ida, including the wave-induced surface roughness changed the form and dimension of the main low pressure cell, affecting the intensity and direction of the winds. The combined wave age- and wave steepness

  1. Ocean-atmosphere dynamics during Hurricane Ida and Nor'Ida: An application of the coupled ocean-;atmosphere–wave–sediment transport (COAWST) modeling system

    Science.gov (United States)

    Olabarrieta, Maitane; Warner, John C.; Armstrong, Brandy N.; Zambon, Joseph B.; He, Ruoying

    2012-01-01

    The coupled ocean–atmosphere–wave–sediment transport (COAWST) modeling system was used to investigate atmosphere–ocean–wave interactions in November 2009 during Hurricane Ida and its subsequent evolution to Nor'Ida, which was one of the most costly storm systems of the past two decades. One interesting aspect of this event is that it included two unique atmospheric extreme conditions, a hurricane and a nor'easter storm, which developed in regions with different oceanographic characteristics. Our modeled results were compared with several data sources, including GOES satellite infrared data, JASON-1 and JASON-2 altimeter data, CODAR measurements, and wave and tidal information from the National Data Buoy Center (NDBC) and the National Tidal Database. By performing a series of numerical runs, we were able to isolate the effect of the interaction terms between the atmosphere (modeled with Weather Research and Forecasting, the WRF model), the ocean (modeled with Regional Ocean Modeling System (ROMS)), and the wave propagation and generation model (modeled with Simulating Waves Nearshore (SWAN)). Special attention was given to the role of the ocean surface roughness. Three different ocean roughness closure models were analyzed: DGHQ (which is based on wave age), TY2001 (which is based on wave steepness), and OOST (which considers both the effects of wave age and steepness). Including the ocean roughness in the atmospheric module improved the wind intensity estimation and therefore also the wind waves, surface currents, and storm surge amplitude. For example, during the passage of Hurricane Ida through the Gulf of Mexico, the wind speeds were reduced due to wave-induced ocean roughness, resulting in better agreement with the measured winds. During Nor'Ida, including the wave-induced surface roughness changed the form and dimension of the main low pressure cell, affecting the intensity and direction of the winds. The combined wave age- and wave steepness

  2. High-resolution ocean and atmospheric modeling of the Florida Big Bend region

    Science.gov (United States)

    Morey, S. L.; Dukhovskoy, D. S.; van Dyke, D.; Todd, A. C.; Chassignet, E. P.

    2008-12-01

    An ocean and atmospheric modeling system is developed for the Florida Big Bend Region (BBR) in the northeastern Gulf of Mexico for interdisciplinary studies and support of a coastal observing system. The ocean modeling component consists of ROMS configured at 30 arcsec resolution nested within a 1/25° HYCOM Gulf of Mexico - Western Atlantic nowcast/forecast system. This methodology is employed to accurately simulate the impacts of offshore mesoscale circulation features and propagating signals along the shelf on the fine scale processes in the BBR. The atmospheric modeling component is a 1.33km WRF triply nested within a 4 km Gulf of Mexico -Western Atlantic domain and the 12 km WRF North American Mesoscale atmospheric prediction system run at NCEP. Real-time oceanic and atmospheric measurements from an array of instruments within the domain are used for validation of the modeling system. The observations and modeling system are applied to studies of air-sea interaction associated with cold air outbreak events over the shelf and sea breeze circulation over the coastal region. The system also supports marine ecosystem and fisheries research programs in the northeastern Gulf.

  3. User’s Manual for the Navy Coastal Ocean Model (NCOM) Version 4.0

    Science.gov (United States)

    2009-02-06

    number of aspects of the ocean model run, including the model physics and numerics, the forcing, and the output. modelo - name of model (NCOM1) being...Examples of global tidal data bases are the Grenoble Tidal Data Base (e.g., FES-99 and FES-2004) and the Oregon State University (OSU) tidal data...Atmos. Sci., 31: 1791-1806. Oregon State Tidal Model web page, http://www.oce.orst.edu/po/research/tide/index.html. 57 NRL/MR/7320--08-9151 NCOM

  4. Navy Coastal Ocean Model (NCOM) Version 4.0 (User’s Manual)

    Science.gov (United States)

    2009-02-06

    number of aspects of the ocean model run, including the model physics and numerics, the forcing, and the output. modelo - name of model (NCOM1...Examples of global tidal data bases are the Grenoble Tidal Data Base (e.g., FES-99 and FES-2004) and the Oregon State University (OSU) tidal...Atmos. Sci., 31: 1791-1806. Oregon State Tidal Model web page, http://www.oce.orst.edu/po/research/tide/index.html. 57 NRL/MR/7320--08-9151

  5. Phytoplankton processes. Part 2: Rates of primary production and factors controlling algal growth during the Southern Ocean Iron RElease Experiment (SOIREE)

    Science.gov (United States)

    Gall, M. P.; Strzepek, R.; Maldonado, M.; Boyd, P. W.

    The Southern Ocean Iron RElease Experiment (SOIREE) fertilised 200 km 2 of polar waters (mixed-layer depth, 65 m) south of Australia in February 1999. During the 13-d SOIREE, iron enrichment stimulated primary production, algal growth and biogenic silica production rates. A floristic shift from small to large cells resulted in a greater contribution to community production by diatoms, which contributed >60% to community production towards the end of SOIREE. Column-integrated rates of primary production increased by more than 10-fold, and community production rates (normalised to chlorophyll) had doubled by day 4, but then declined after day 6 to initial rates. Iron enrichment increased the growth rates of the algal community from 0.02 to 0.15 d -1 (based on changes in in-situ chlorophyll concentrations), from 0.02 to 0.2 d -1 (based on algal carbon), and more than doubled initial rates (based on 14C) to 0.2 d -1 during SOIREE. However, these iron-elevated rates were less than the maximum rates (0.69 d -1) predicted for waters at 2.5°C. Community biogenic silica production rates increased by 6-fold, i.e. to a lesser extent than primary production rates, resulting in a 2-fold reduction in the silicic-acid : carbon uptake ratio. Shipboard perturbation experiments indicated that iron, rather than both iron and light, limited algal growth in these waters. However, a significant increase in light attenuation in situ due to algal self-shading, suggested that light limitation of algal growth might become significant after day 13 at this locale. Limitation of algal growth by both iron (and silicic acid and/or zinc) within iron-fertilised waters after day 8 of SOIREE was not evident from the results of a shipboard experiment. A simple mathematical model of particulate organic carbon (POC) potential export during SOIREE predicted large increases in export, due to both elevated production rates and a floristic shift to large cells. However, no significant increase in POC

  6. A model of oceanic development by ridge jumping: Opening of the Scotia Sea

    Science.gov (United States)

    Maldonado, Andrés; Bohoyo, Fernando; Galindo-Zaldívar, Jesús; Hernández-Molina, Fº. Javier; Lobo, Francisco J.; Lodolo, Emanuele; Martos, Yasmina M.; Pérez, Lara F.; Schreider, Anatoly A.; Somoza, Luis

    2014-12-01

    , where an accretionary prism is identified. Such tectonics, locally affecting up to the most recent deposits, imply that a portion of the primitive oceanic crust is absent. Based on the stratigraphy of the deposits and the magnetic anomalies, an age of 44 Ma is postulated for the initiation of oceanic spreading in the eastern Ona basin, while spreading in the western Ona Basin would have occurred during the early Oligocene. The tectonics, depositional units and the age of the oceanic crust provide additional evidence regarding the Eocene opening of Drake Passage. The initial tectonic fragmentation of the South America-Antarctic Bridge, followed by oceanic spreading, was characterized by jumping of the spreading centers. An Eocene spreading center in the eastern Ona Basin was the precursor of the Scotia Sea. A model comprising four tectonic evolutionary phases is proposed: Phase I, Pacific subduction - Paleocene to middle Eocene; Phase II, eastern Ona back-arc spreading - middle to late Eocene; Phase III, ridge jumping and western Ona back-arc spreading - early Oligocene; and Phase IV, ridge jumping and West Scotia Ridge spreading - early Oligocene to late Miocene. The development of shallow gateways allowed for an initial connection between the Pacific and Atlantic oceans and, hence, initiated the thermal isolation of Antarctica during the middle and late Eocene. Deep gateways that enhanced the full isolation of Antarctica developed in Drake Passage from the Eocene/Oligocene transition onward. A significant correlation is observed between the tectonics, stratigraphic units and major climate events, thereby indicating the influence of the local tectonic and paleoceanographic events of the Southern Ocean on global evolution.

  7. Development of new techniques for assimilating satellite altimetry data into ocean models

    Science.gov (United States)

    Yu, Peng

    State of the art fully three-dimensional ocean models are very computationally expensive and their adjoints are even more resource intensive. However, many features of interest are approximated by the first baroclinic mode over much of the ocean, especially in the lower and mid latitude regions. Based on this dynamical feature, a new type of data assimilation scheme to assimilate sea surface height (SSH) data, a reduced-space adjoint technique, is developed and implemented with a three-dimensional model using vertical normal mode decomposition. The technique is tested with the Navy Coastal Ocean Model (NCOM) configured to simulate the Gulf of Mexico. The assimilation procedure works by minimizing the cost function, which generalizes the misfit between the observations and their counterpart model variables. The "forward" model is integrated for the period during which the data are assimilated. Vertical normal mode decomposition retrieves the first baroclinic mode, and the data misfit between the model outputs and observations is calculated. Adjoint equations based on a one-active-layer reduced gravity model, which approximates the first baroclinic mode, are integrated backward in time to get the gradient of the cost function with respect to the control variables (velocity and SSH of the first baroclinic mode). The gradient is input to an optimization algorithm (the limited memory Broyden-Fletcher-Goldfarb-Shanno (BFGS) method is used for the cases presented here) to determine the new first baroclinic mode velocity and SSH fields, which are used to update the forward model variables at the initial time. Two main issues in the area of ocean data assimilation are addressed: (1) How can information provided only at the sea surface be transferred dynamically into deep layers? (2) How can information provided only locally, in limited oceanic regions, be horizontally transferred to ocean areas far away from the data-dense regions, but dynamically connected to it? The first

  8. Ocean regional circulation model sensitizes to resolution of the lateral boundary conditions

    Science.gov (United States)

    Pham, Van Sy; Hwang, Jin Hwan

    2017-04-01

    Dynamical downscaling with nested regional oceanographic models is an effective approach for forecasting operationally coastal weather and projecting long term climate on the ocean. Nesting procedures deliver the unwanted in dynamic downscaling due to the differences of numerical grid sizes and updating steps. Therefore, such unavoidable errors restrict the application of the Ocean Regional Circulation Model (ORCMs) in both short-term forecasts and long-term projections. The current work identifies the effects of errors induced by computational limitations during nesting procedures on the downscaled results of the ORCMs. The errors are quantitatively evaluated for each error source and its characteristics by the Big-Brother Experiments (BBE). The BBE separates identified errors from each other and quantitatively assess the amount of uncertainties employing the same model to simulate for both nesting and nested model. Here, we focus on discussing errors resulting from two main matters associated with nesting procedures. They should be the spatial grids' differences and the temporal updating steps. After the diverse cases from separately running of the BBE, a Taylor diagram was adopted to analyze the results and suggest an optimization intern of grid size and updating period and domain sizes. Key words: lateral boundary condition, error, ocean regional circulation model, Big-Brother Experiment. Acknowledgement: This research was supported by grants from the Korean Ministry of Oceans and Fisheries entitled "Development of integrated estuarine management system" and a National Research Foundation of Korea (NRF) Grant (No. 2015R1A5A 7037372) funded by MSIP of Korea. The authors thank the Integrated Research Institute of Construction and Environmental Engineering of Seoul National University for administrative support.

  9. Application of an Unstructured Grid-Based Water Quality Model to Chesapeake Bay and Its Adjacent Coastal Ocean

    Directory of Open Access Journals (Sweden)

    Meng Xia

    2016-09-01

    Full Text Available To provide insightful information on water quality management, it is crucial to improve the understanding of the complex biogeochemical cycles of Chesapeake Bay (CB, so a three-dimensional unstructured grid-based water quality model (ICM based on the finite-volume coastal ocean model (FVCOM was configured for CB. To fully accommodate the CB study, the water quality simulations were evaluated by using different horizontal and vertical model resolutions, various wind sources and other hydrodynamic and boundary settings. It was found that sufficient horizontal and vertical resolution favored simulating material transport efficiently and that winds from North American Regional Reanalysis (NARR generated stronger mixing and higher model skill for dissolved oxygen simulation relative to observed winds. Additionally, simulated turbulent mixing was more influential on water quality dynamics than that of bottom friction: the former considerably influenced the summer oxygen ventilation and new primary production, while the latter was found to have little effect on the vertical oxygen exchange. Finally, uncertainties in riverine loading led to larger deviation in nutrient and phytoplankton simulation than that of benthic flux, open boundary loading and predation. Considering these factors, the model showed reasonable skill in simulating water quality dynamics in a 10-year (2003–2012 period and captured the seasonal chlorophyll-a distribution patterns. Overall, this coupled modeling system could be utilized to analyze the spatiotemporal variation of water quality dynamics and to predict their key biophysical drivers in the future.

  10. Covariant Lyapunov Vectors in a Coupled Atmosphere-Ocean Model - Multiscale Effects and Geometric Degeneracy

    Science.gov (United States)

    Lucarini, Valerio; Vannitsem, Stephane

    2016-04-01

    We study a simplified coupled atmosphere-ocean model using the formalism of covariant Lyapunov vectors (CLVs), which link physically-based directions of perturbations to growth/decay rates. The model is obtained via a severe truncation of quasi-geostrophic equations for the two fluids, and includes a simple yet physically meaningful representation of their dynamical/thermodynamical coupling. The model has 36 degrees of freedom, and the parameters are chosen so that a chaotic behaviour is observed. One finds two positive Lyapunov exponents (LEs), sixteen negative LEs, and eighteen near-zero LEs. The presence of many near-zero LEs results from the vast time-scale separation between the characteristic time scales of the two fluids, and leads to nontrivial error growth properties in the tangent space spanned by the corresponding CLVs, which are geometrically very degenerate. Such CLVs correspond to two different classes of ocean/atmosphere coupled modes. The tangent space spanned by the CLVs corresponding to the positive and negative LEs has, instead, a non-pathological behaviour, and one can construct robust large deviations laws for the finite time LEs, thus providing a universal model for assessing predictability on long to ultra-long scales along such directions. Finally, it is somewhat surprising to find that the tangent space of the unstable manifold has strong projection on both atmospheric and oceanic components, thus giving evidence that coupled modes are responsible for the instability of the flow.

  11. Using Green's Functions to initialize and adjust a global, eddying ocean biogeochemistry general circulation model

    Science.gov (United States)

    Brix, H.; Menemenlis, D.; Hill, C.; Dutkiewicz, S.; Jahn, O.; Wang, D.; Bowman, K.; Zhang, H.

    2015-11-01

    The NASA Carbon Monitoring System (CMS) Flux Project aims to attribute changes in the atmospheric accumulation of carbon dioxide to spatially resolved fluxes by utilizing the full suite of NASA data, models, and assimilation capabilities. For the oceanic part of this project, we introduce ECCO2-Darwin, a new ocean biogeochemistry general circulation model based on combining the following pre-existing components: (i) a full-depth, eddying, global-ocean configuration of the Massachusetts Institute of Technology general circulation model (MITgcm), (ii) an adjoint-method-based estimate of ocean circulation from the Estimating the Circulation and Climate of the Ocean, Phase II (ECCO2) project, (iii) the MIT ecosystem model "Darwin", and (iv) a marine carbon chemistry model. Air-sea gas exchange coefficients and initial conditions of dissolved inorganic carbon, alkalinity, and oxygen are adjusted using a Green's Functions approach in order to optimize modeled air-sea CO2 fluxes. Data constraints include observations of carbon dioxide partial pressure (pCO2) for 2009-2010, global air-sea CO2 flux estimates, and the seasonal cycle of the Takahashi et al. (2009) Atlas. The model sensitivity experiments (or Green's Functions) include simulations that start from different initial conditions as well as experiments that perturb air-sea gas exchange parameters and the ratio of particulate inorganic to organic carbon. The Green's Functions approach yields a linear combination of these sensitivity experiments that minimizes model-data differences. The resulting initial conditions and gas exchange coefficients are then used to integrate the ECCO2-Darwin model forward. Despite the small number (six) of control parameters, the adjusted simulation is significantly closer to the data constraints (37% cost function reduction, i.e., reduction in the model-data difference, relative to the baseline simulation) and to independent observations (e.g., alkalinity). The adjusted air-sea gas

  12. The global marine phosphorus cycle: sensitivity to oceanic circulation

    Directory of Open Access Journals (Sweden)

    C. P. Slomp

    2007-01-01

    Full Text Available A new mass balance model for the coupled marine cycles of phosphorus (P and carbon (C is used to examine the relationships between oceanic circulation, primary productivity, and sedimentary burial of reactive P and particulate organic C (POC, on geological time scales. The model explicitly represents the exchanges of water and particulate matter between the continental shelves and the open ocean, and it accounts for the redox-dependent burial of POC and the various forms of reactive P (iron(III-bound P, particulate organic P (POP, authigenic calcium phosphate, and fish debris. Steady state and transient simulations indicate that a slowing down of global ocean circulation decreases primary production in the open ocean, but increases that in the coastal ocean. The latter is due to increased transfer of soluble P from deep ocean water to the shelves, where it fuels primary production and causes increased reactive P burial. While authigenic calcium phosphate accounts for most reactive P burial ocean-wide, enhanced preservation of fish debris may become an important reactive P sink in deep-sea sediments during periods of ocean anoxia. Slower ocean circulation globally increases POC burial, because of enhanced POC preservation under anoxia in deep-sea depositional environments and higher primary productivity along the continental margins. In accordance with geological evidence, the model predicts increased accumulation of reactive P on the continental shelves during and following periods of ocean anoxia.

  13. Model-Based Assessment of the CO2 Sequestration Potential of Coastal Ocean Alkalinization

    Science.gov (United States)

    Feng, E. Y.; Koeve, W.; Keller, D. P.; Oschlies, A.

    2017-12-01

    The potential of coastal ocean alkalinization (COA), a carbon dioxide removal (CDR) climate engineering strategy that chemically increases ocean carbon uptake and storage, is investigated with an Earth system model of intermediate complexity. The CDR potential and possible environmental side effects are estimated for various COA deployment scenarios, assuming olivine as the alkalinity source in ice-free coastal waters (about 8.6% of the global ocean's surface area), with dissolution rates being a function of grain size, ambient seawater temperature, and pH. Our results indicate that for a large-enough olivine deployment of small-enough grain sizes (10 µm), atmospheric CO2 could be reduced by more than 800 GtC by the year 2100. However, COA with coarse olivine grains (1000 µm) has little CO2 sequestration potential on this time scale. Ambitious CDR with fine olivine grains would increase coastal aragonite saturation Ω to levels well beyond those that are currently observed. When imposing upper limits for aragonite saturation levels (Ωlim) in the grid boxes subject to COA (Ωlim = 3.4 and 9 chosen as examples), COA still has the potential to reduce atmospheric CO2 by 265 GtC (Ωlim = 3.4) to 790 GtC (Ωlim = 9) and increase ocean carbon storage by 290 Gt (Ωlim = 3.4) to 913 Gt (Ωlim = 9) by year 2100.

  14. A bio-optical model suitable for use in forward and inverse coupled atmosphere-ocean radiative transfer models

    International Nuclear Information System (INIS)

    Zhang Kexin; Li Wei; Eide, Hans; Stamnes, Knut

    2007-01-01

    A simple, yet complete bio-optical model for the inherent optical properties (IOPs) of oceanic waters is developed. This bio-optical model is specifically designed for use in comprehensive, multiple scattering radiative transfer models for the coupled atmosphere-ocean system. Such models can be used to construct next-generation algorithms for simultaneous retrieval of aerosol and marine parameters. The computed remote sensing reflectance R rs (λ) is validated against field measurements of R rs (λ) compiled in the SeaBASS data base together with simultaneous chlorophyll concentrations (C) ranging from 0.03 to 100mgm -3 . This connection between R rs and C is used to construct a chlorophyll concentration retrieval algorithm that yields reliable results for a large range of chlorophyll concentrations. The overall performance of a MODIS/VIIRS chlorophyll concentration retrieval algorithm is found to be less satisfactory

  15. An Evaluation of the Large-Scale Implementation of Ocean Thermal Energy Conversion (OTEC Using an Ocean General Circulation Model with Low-Complexity Atmospheric Feedback Effects

    Directory of Open Access Journals (Sweden)

    Yanli Jia

    2018-01-01

    Full Text Available Previous investigations of the large-scale deployment of Ocean Thermal Energy Conversions (OTEC systems are extended by allowing some atmospheric feedback in an ocean general circulation model. A modified ocean-atmosphere thermal boundary condition is used where relaxation corresponds to atmospheric longwave radiation to space, and an additional term expresses horizontal atmospheric transport. This produces lower steady-state OTEC power maxima (8 to 10.2 TW instead of 14.1 TW for global OTEC scenarios, and 7.2 to 9.3 TW instead of 11.9 TW for OTEC implementation within 100 km of coastlines. When power production peaks, power intensity remains practically unchanged, at 0.2 TW per Sverdrup of OTEC deep cold seawater, suggesting a similar degradation of the OTEC thermal resource. Large-scale environmental effects include surface cooling in low latitudes and warming elsewhere, with a net heat intake within the water column. These changes develop rapidly from the propagation of Kelvin and Rossby waves, and ocean current advection. Two deep circulation cells are generated in the Atlantic and Indo-Pacific basins. The Atlantic Meridional Overturning Circulation (AMOC is reinforced while an AMOC-like feature appears in the North Pacific, with deep convective winter events at high latitudes. Transport between the Indo-Pacific and the Southern Ocean is strengthened, with impacts on the Atlantic via the Antarctic Circumpolar Current (ACC.

  16. A forward model for calculating the AMSR brightness temperatures of sea-ice and ocean as seen through the atmosphere

    DEFF Research Database (Denmark)

    Pedersen, Leif Toudal; Hofmann-Bang, Dorthe

    with SSM/I retrievals, with ocean and atmosphere retrievals by Remote Sensing Systems, with SST data from the Ocean and Sea Ice SAF and with sea ice concentrations and MY-fractions of the NASA Team and Comiso Bootstrap sea ice algorithms. The forward model is the level 0 emissivity and radiative transfer...

  17. Towards a model for integrative medicine in Swedish primary care

    Directory of Open Access Journals (Sweden)

    Falkenberg Torkel

    2007-07-01

    Full Text Available Abstract Background Collaboration between providers of conventional care and complementary therapies (CTs has gained in popularity but there is a lack of conceptualised models for delivering such care, i.e. integrative medicine (IM. The aim of this paper is to describe some key findings relevant to the development and implementation of a proposed model for IM adapted to Swedish primary care. Methods Investigative procedures involved research group and key informant meetings with multiple stakeholders including general practitioners, CT providers, medical specialists, primary care administrators and county council representatives. Data collection included meeting notes which were fed back within the research group and used as ongoing working documents. Data analysis was made by immersion/crystallisation and research group consensus. Results were categorised within a public health systems framework of structures, processes and outcomes. Results The outcome was an IM model that aimed for a patient-centered, interdisciplinary, non-hierarchical mix of conventional and complementary medical solutions to individual case management of patients with pain in the lower back and/or neck. The IM model case management adhered to standard clinical practice including active partnership between a gate-keeping general practitioner, collaborating with a team of CT providers in a consensus case conference model of care. CTs with an emerging evidence base included Swedish massage therapy, manual therapy/naprapathy, shiatsu, acupuncture and qigong. Conclusion Despite identified barriers such as no formal recognition of CT professions in Sweden, it was possible to develop a model for IM adapted to Swedish primary care. The IM model calls for testing and refinement in a pragmatic randomised controlled trial to explore its clinical effectiveness.

  18. Orographic effects on tropical climate in a coupled ocean-atmosphere general circulation model

    Science.gov (United States)

    Okajima, Hideki

    Large-scale mountain modifies the atmospheric circulation directly through dynamic and thermodynamic process, and also indirectly through the interaction with the ocean. To investigate orographic impacts on tropical climate, a fully coupled general circulation model (CGCM) is developed by coupling a state-of-the-art atmospheric general circulation model and an ocean general circulation model. With realistic boundary conditions, the CGCM produces a reasonable climatology of sea surface temperature (SST), surface winds, and precipitation. When global mountains are removed, the model climatology displays substantial changes in both the mean-state and the seasonal cycle. The equatorial eastern Pacific SST acquires a semi-annual component as inter-tropical convergence zone (ITCZ) flips and flops across the equator following the seasonal migration of the sun. Without the Andes, wet air flows into the southeastern tropical Pacific from the humid Amazon, which weakens the meridional asymmetry during the Peruvian warm season (February-April). In addition, the northeasterly trade winds are enhanced north of the equator without the orographic blocking of Central American mountains and cools SST. Triggered by the SST cooling north and moistening south of the equator, the wind-evaporation-SST (WES) feedback further weakens the meridional asymmetry and prolongs the southern ITCZ. In the Atlantic Ocean, the equatorial cold tongue is substantially strengthened and develops a pronounced annual cycle in the absence of mountains. The easterly winds are overall enhanced over the equatorial Atlantic without orographic heating over the African highlands, developing a zonal asymmetry strengthened by the Bjerknes feedback. In the Indian Ocean, the thermocline shoals eastward and an equatorial cold tongue appears twice a year. During boreal summer, the Findlater jet is greatly weakened off Somalia and SST warms in the western Indian Ocean, forcing the equatorial easterly winds amplified

  19. Ocean and Atmospheric Profiling Lidar Observations and Its Link to Ocean Carbon Cycle

    Science.gov (United States)

    Hu, Yongxiang

    2010-01-01

    This study introduces space-based ocean and atmospheric profiling lidar for improving modeling and understanding of ocean carbon cycle. Unique measurements from space-based profiling lidars include (1) the global ocean surface mean square slope measurements for improving air-sea turbulence exchange estimates; (2) the backscatter and beam attenuation measurements for improving the global estimate of partial pressure of CO2 of the ocean with the reduction of uncertainties in primary productivity estimates. Global statistics of CALIOP integrated ocean subsurface backscatter measurements of coastal waters will be presented. The study will also assess the impact of CALIOP on the uncertainty reduction of primary productivity and the improvement of CO2 partial pressure estimates. Ocean surface roughness statistics, its applications in air-sea interaction and its comparisons with other measurements will also be presented

  20. Comparing Intrinsic Connectivity Models for the Primary Auditory Cortices

    Science.gov (United States)

    Hamid, Khairiah Abdul; Yusoff, Ahmad Nazlim; Mohamad, Mazlyfarina; Hamid, Aini Ismafairus Abd; Manan, Hanani Abd

    2010-07-01

    This fMRI study is about modeling the intrinsic connectivity between Heschl' gyrus (HG) and superior temporal gyrus (STG) in human primary auditory cortices. Ten healthy male subjects participated and required to listen to white noise stimulus during the fMRI scans. Two intrinsic connectivity models comprising bilateral HG and STG were constructed using statistical parametric mapping (SPM) and dynamic causal modeling (DCM). Group Bayes factor (GBF), positive evidence ratio (PER) and Bayesian model selection (BMS) for group studies were used in model comparison. Group results indicated significant bilateral asymmetrical activation (puncorr < 0.001) in HG and STG. Comparison results showed strong evidence of Model 2 as the preferred model (STG as the input center) with GBF value of 5.77 × 1073 The model is preferred by 6 out of 10 subjects. The results were supported by BMS results for group studies. One-sample t-test on connection values obtained from Model 2 indicates unidirectional parallel connections from STG to bilateral HG (p<0.05). Model 2 was determined to be the most probable intrinsic connectivity model between bilateral HG and STG when listening to white noise.

  1. 231Pa and 230Th in the ocean model of the Community Earth System Model (CESM1.3)

    Science.gov (United States)

    Gu, Sifan; Liu, Zhengyu

    2017-12-01

    The sediment 231Pa / 230Th activity ratio is emerging as an important proxy for deep ocean circulation in the past. In order to allow for a direct model-data comparison and to improve our understanding of the sediment 231Pa / 230Th activity ratio, we implement 231Pa and 230Th in the ocean component of the Community Earth System Model (CESM). In addition to the fully coupled implementation of the scavenging behavior of 231Pa and 230Th with the active marine ecosystem module (particle-coupled: hereafter p-coupled), another form of 231Pa and 230Th have also been implemented with prescribed particle flux fields of the present climate (particle-fixed: hereafter p-fixed). The comparison of the two forms of 231Pa and 230Th helps to isolate the influence of the particle fluxes from that of ocean circulation. Under present-day climate forcing, our model is able to simulate water column 231Pa and 230Th activity and the sediment 231Pa / 230Th activity ratio in good agreement with available observations. In addition, in response to freshwater forcing, the p-coupled and p-fixed sediment 231Pa / 230Th activity ratios behave similarly over large areas of low productivity on long timescales, but can differ substantially in some regions of high productivity and on short timescales, indicating the importance of biological productivity in addition to ocean transport. Therefore, our model provides a potentially powerful tool to help the interpretation of sediment 231Pa / 230Th reconstructions and to improve our understanding of past ocean circulation and climate changes.

  2. Modeling of Food and Nutrition Surveillance in Primary Health Care

    Directory of Open Access Journals (Sweden)

    Santuzza Arreguy Silva VITORINO

    Full Text Available ABSTRACT Objective: To describe the modeling stages of food and nutrition surveillance in the Primary Health Care of the Unified Health Care System, considering its activities, objectives, and goals Methods: Document analysis and semi-structured interviews were used for identifying the components, describe the intervention, and identify potential assessment users. Results: The results include identification of the objectives and goals of the intervention, the required inputs, activities, and expected effects. The intervention was then modeled based on these data. The use of the theoretical logic model optimizes times, resources, definition of the indicators that require monitoring, and the aspects that require assessment, identifying more clearly the contribution of the intervention to the results Conclusion: Modeling enabled the description of food and nutrition surveillance based on its components and may guide the development of viable plans to monitor food and nutrition surveillance actions so that modeling can be established as a local intersectoral planning instrument.

  3. High-frequency and meso-scale winter sea-ice variability in the Southern Ocean in a high-resolution global ocean model

    Science.gov (United States)

    Stössel, Achim; von Storch, Jin-Song; Notz, Dirk; Haak, Helmuth; Gerdes, Rüdiger

    2018-03-01

    This study is on high-frequency temporal variability (HFV) and meso-scale spatial variability (MSV) of winter sea-ice drift in the Southern Ocean simulated with a global high-resolution (0.1°) sea ice-ocean model. Hourly model output is used to distinguish MSV characteristics via patterns of mean kinetic energy (MKE) and turbulent kinetic energy (TKE) of ice drift, surface currents, and wind stress, and HFV characteristics via time series of raw variables and correlations. We find that (1) along the ice edge, the MSV of ice drift coincides with that of surface currents, in particular such due to ocean eddies; (2) along the coast, the MKE of ice drift is substantially larger than its TKE and coincides with the MKE of wind stress; (3) in the interior of the ice pack, the TKE of ice drift is larger than its MKE, mostly following the TKE pattern of wind stress; (4) the HFV of ice drift is dominated by weather events, and, in the absence of tidal currents, locally and to a much smaller degree by inertial oscillations; (5) along the ice edge, the curl of the ice drift is highly correlated with that of surface currents, mostly reflecting the impact of ocean eddies. Where ocean eddies occur and the ice is relatively thin, ice velocity is characterized by enhanced relative vorticity, largely matching that of surface currents. Along the ice edge, ocean eddies produce distinct ice filaments, the realism of which is largely confirmed by high-resolution satellite passive-microwave data.

  4. Calculation of water-bearing primary basalt and estimation of source mantle conditions beneath arcs: PRIMACALC2 model for WINDOWS

    Science.gov (United States)

    Kimura, Jun-Ichi; Ariskin, Alexey A.

    2014-04-01

    We present a new method for estimating the composition of water-bearing primary arc basalt and its source mantle conditions. The PRIMACALC2 model uses a thermodynamic fractional crystallization model COMAGMAT3.72 and runs with an Excel macro to examine the mantle equilibrium and trace element calculations of a primary basalt. COMAGMAT3.72 calculates magma fractionation in 0-10 kb at various compositions, pressure, oxygen fugacity, and water content, but is only applicable for forward calculations. PRIMACALC2 first calculates the provisional composition of a primary basalt from an observed magma. The basalt composition is then calculated by COMAGMAT3.72 for crystallization. Differences in elemental concentrations between observed and the closest-match calculated magmas are then adjusted in the primary basalt. Further iteration continues until the calculated magma composition converges with the observed magma, resulting in the primary basalt composition. Once the fitting is satisfied, back calculations of trace elements are made using stepwise addition of fractionated minerals. Mantle equilibrium of the primary basalt is tested using the Fo-NiO relationship of olivine in equilibrium with the primary basalt, and thus with the source mantle. Source mantle pressure, temperature, and degree of melting are estimated using petrogenetic grids based on experimental data obtained in anhydrous systems. Mantle melting temperature in a hydrous system is computed by adjusting T with a parameterization for a water-bearing system. PRIMACALC2 can be used either in dry or water-bearing arc magmas and is also applicable to mid-ocean ridge basalts and nonalkalic ocean island basalts.

  5. A New Coupled Ocean-Waves-Atmosphere Model Designed for Tropical Storm Studies: Example of Tropical Cyclone Bejisa (2013-2014) in the South-West Indian Ocean

    Science.gov (United States)

    Pianezze, J.; Barthe, C.; Bielli, S.; Tulet, P.; Jullien, S.; Cambon, G.; Bousquet, O.; Claeys, M.; Cordier, E.

    2018-03-01

    Ocean-Waves-Atmosphere (OWA) exchanges are not well represented in current Numerical Weather Prediction (NWP) systems, which can lead to large uncertainties in tropical cyclone track and intensity forecasts. In order to explore and better understand the impact of OWA interactions on tropical cyclone modeling, a fully coupled OWA system based on the atmospheric model Meso-NH, the oceanic model CROCO, and the wave model WW3 and called MSWC was designed and applied to the case of tropical cyclone Bejisa (2013-2014). The fully coupled OWA simulation shows good agreement with the literature and available observations. In particular, simulated significant wave height is within 30 cm of measurements made with buoys and altimeters. Short-term (wind speed are necessary to produce sea salt aerosol emissions in the right place (in the eyewall of the tropical cyclone) and with the right size distribution, which is critical for cloud microphysics.

  6. On the performance of a generic length scale turbulence model within an adaptive finite element ocean model

    Science.gov (United States)

    Hill, Jon; Piggott, M. D.; Ham, David A.; Popova, E. E.; Srokosz, M. A.

    2012-10-01

    Research into the use of unstructured mesh methods for ocean modelling has been growing steadily in the last few years. One advantage of using unstructured meshes is that one can concentrate resolution where it is needed. In addition, dynamic adaptive mesh optimisation (DAMO) strategies allow resolution to be concentrated when this is required. Despite the advantage that DAMO gives in terms of improving the spatial resolution where and when required, small-scale turbulence in the oceans still requires parameterisation. A two-equation, generic length scale (GLS) turbulence model (one equation for turbulent kinetic energy and another for a generic turbulence length-scale quantity) adds this parameterisation and can be used in conjunction with adaptive mesh techniques. In this paper, an implementation of the GLS turbulence parameterisation is detailed in a non-hydrostatic, finite-element, unstructured mesh ocean model, Fluidity-ICOM. The implementation is validated by comparing to both a laboratory-scale experiment and real-world observations, on both fixed and adaptive meshes. The model performs well, matching laboratory and observed data, with resolution being adjusted as necessary by DAMO. Flexibility in the prognostic fields used to construct the error metric used in DAMO is required to ensure best performance. Moreover, the adaptive mesh models perform as well as fixed mesh models in terms of root mean square error to observation or theoretical mixed layer depths, but uses fewer elements and hence has a reduced computational cost.

  7. Sensitivity of a global ice-ocean model to the Bering Strait throughflow

    Energy Technology Data Exchange (ETDEWEB)

    Goosse, H. [Universite Catholique de Louvain (UCL), Louvain-la-Neuve (Belgium). Inst. d`Astronomie et de Geophysique G. Lemaitre; Campin, J.M. [Universite Catholique de Louvain (UCL), Louvain-la-Neuve (Belgium). Inst. d`Astronomie et de Geophysique G. Lemaitre; Fichefet, T. [Universite Catholique de Louvain (UCL), Louvain-la-Neuve (Belgium). Inst. d`Astronomie et de Geophysique G. Lemaitre; Deleersnijder, E. [Universite Catholique de Louvain (UCL), Louvain-la-Neuve (Belgium). Inst. d`Astronomie et de Geophysique G. Lemaitre

    1997-06-01

    To understand the influence of the Bering Strait on the World Ocean`s circulation, a model sensitivity analysis is conducted. The numerical experiments are carried out with a global, coupled ice-ocean model. The water transport through the Bering Strait is parametrized according to the geostrophic control theory. The model is driven by surface fluxes derived from bulk formulae assuming a prescribed atmospheric seasonal cycle. In addition, a weak restoring to observed surface salinities is applied to compensate for the global imbalance of the imposed surface freshwater fluxes. The freshwater flux from the North Pacific to the North Atlantic associated with the Bering Strait throughflow seems to be an important element in the freshwater budget of the Greenland and Norwegian seas and of the Atlantic. This flux induces a freshening of the North Atlantic surface waters, which reduces the convective activity and leads to a noticeable (6%) weakening of the thermohaline conveyor belt. It is argued that the contrasting results obtained by Reason and Power are due to the type of surface boundary conditions they used. (orig.). With 8 figs.

  8. Sequential assimilation of multi-mission dynamical topography into a global finite-element ocean model

    Directory of Open Access Journals (Sweden)

    S. Skachko

    2008-12-01

    Full Text Available This study focuses on an accurate estimation of ocean circulation via assimilation of satellite measurements of ocean dynamical topography into the global finite-element ocean model (FEOM. The dynamical topography data are derived from a complex analysis of multi-mission altimetry data combined with a referenced earth geoid. The assimilation is split into two parts. First, the mean dynamic topography is adjusted. To this end an adiabatic pressure correction method is used which reduces model divergence from the real evolution. Second, a sequential assimilation technique is applied to improve the representation of thermodynamical processes by assimilating the time varying dynamic topography. A method is used according to which the temperature and salinity are updated following the vertical structure of the first baroclinic mode. It is shown that the method leads to a partially successful assimilation approach reducing the rms difference between the model and data from 16 cm to 2 cm. This improvement of the mean state is accompanied by significant improvement of temporal variability in our analysis. However, it remains suboptimal, showing a tendency in the forecast phase of returning toward a free run without data assimilation. Both the mean difference and standard deviation of the difference between the forecast and observation data are reduced as the result of assimilation.

  9. A Magma Accretion Model for the Formation of Oceanic Lithosphere: Implications for Global Heat Loss

    Directory of Open Access Journals (Sweden)

    Valiya M. Hamza

    2010-01-01

    Full Text Available A magma accretion model of oceanic lithosphere is proposed and its implications for understanding its thermal field examined. The new model (designated Variable Basal Accretion—VBA assumes existence of lateral variations in magma accretion rates and temperatures at the boundary zone between the lithosphere and the asthenosphere. However, unlike the previous thermal models of the lithosphere, the ratio of advection to conduction heat transfer is considered a space dependent variable. The results of VBA model simulations reveal that the thickness of the young lithosphere increases with distance from the ridge axis, at rates faster than those predicted by Half-Space Cooling models. Another noteworthy feature of the new model is its ability to account for the main features in the thermal behavior of oceanic lithosphere. The improved fits to bathymetry have been achieved for the entire age range and without the need to invoke the ad-hoc hypothesis of large-scale hydrothermal circulation. Also, use of VBA model does not lead to artificial discontinuities in the temperature field of the lithosphere, as is the case with GDH (Global Depth Heat Flow reference models. The results suggest that estimates of global heat loss need to be downsized by at least 25%.

  10. Investigation into the impact of storms on sustaining summer primary productivity in the Sub-Antarctic Ocean

    CSIR Research Space (South Africa)

    Nicholson, Sarah-Anne

    2016-09-01

    Full Text Available layer. This effect is significant when a mixing transition layer of strong diffusivities (kz > 10−4 m2 s−1) is present beneath the surface-mixing layer. Such subsurface mixing has been shown to arise from interactions between turbulent ocean dynamics...

  11. Flexible global ocean-atmosphere-land system model. A modeling tool for the climate change research community

    International Nuclear Information System (INIS)

    Zhou, Tianjun; Yu, Yongqiang; Liu, Yimin; Wang, Bin

    2014-01-01

    First book available on systematic evaluations of the performance of the global climate model FGOALS. Covers the whole field, ranging from the development to the applications of this climate system model. Provide an outlook for the future development of the FGOALS model system. Offers brief introduction about how to run FGOALS. Coupled climate system models are of central importance for climate studies. A new model known as FGOALS (the Flexible Global Ocean-Atmosphere-Land System model), has been developed by the State Key Laboratory of Numerical Modeling for Atmospheric Sciences and Geophysical Fluid Dynamics, Institute of Atmospheric Physics, Chinese Academy of Sciences (LASG/IAP, CAS), a first-tier national geophysical laboratory. It serves as a powerful tool, both for deepening our understanding of fundamental mechanisms of the climate system and for making decadal prediction and scenario projections of future climate change. ''Flexible Global Ocean-Atmosphere-Land System Model: A Modeling Tool for the Climate Change Research Community'' is the first book to offer systematic evaluations of this model's performance. It is comprehensive in scope, covering both developmental and application-oriented aspects of this climate system model. It also provides an outlook of future development of FGOALS and offers an overview of how to employ the model. It represents a valuable reference work for researchers and professionals working within the related areas of climate variability and change.

  12. Observation- and model-based estimates of particulate dry nitrogen deposition to the oceans

    Directory of Open Access Journals (Sweden)

    A. R. Baker

    2017-07-01

    Full Text Available Anthropogenic nitrogen (N emissions to the atmosphere have increased significantly the deposition of nitrate (NO3− and ammonium (NH4+ to the surface waters of the open ocean, with potential impacts on marine productivity and the global carbon cycle. Global-scale understanding of the impacts of N deposition to the oceans is reliant on our ability to produce and validate models of nitrogen emission, atmospheric chemistry, transport and deposition. In this work,  ∼  2900 observations of aerosol NO3− and NH4+ concentrations, acquired from sampling aboard ships in the period 1995–2012, are used to assess the performance of modelled N concentration and deposition fields over the remote ocean. Three ocean regions (the eastern tropical North Atlantic, the northern Indian Ocean and northwest Pacific were selected, in which the density and distribution of observational data were considered sufficient to provide effective comparison to model products. All of these study regions are affected by transport and deposition of mineral dust, which alters the deposition of N, due to uptake of nitrogen oxides (NOx on mineral surfaces. Assessment of the impacts of atmospheric N deposition on the ocean requires atmospheric chemical transport models to report deposition fluxes; however, these fluxes cannot be measured over the ocean. Modelling studies such as the Atmospheric Chemistry and Climate Model Intercomparison Project (ACCMIP, which only report deposition flux, are therefore very difficult to validate for dry deposition. Here, the available observational data were averaged over a 5° × 5° grid and compared to ACCMIP dry deposition fluxes (ModDep of oxidised N (NOy and reduced N (NHx and to the following parameters from the Tracer Model 4 of the Environmental Chemical Processes Laboratory (TM4: ModDep for NOy, NHx and particulate NO3− and NH4+, and surface-level particulate NO3− and NH4+ concentrations. As a model ensemble, ACCMIP can be

  13. The internal gravity wave spectrum in two high-resolution global ocean models

    Science.gov (United States)

    Arbic, B. K.; Ansong, J. K.; Buijsman, M. C.; Kunze, E. L.; Menemenlis, D.; Müller, M.; Richman, J. G.; Savage, A.; Shriver, J. F.; Wallcraft, A. J.; Zamudio, L.

    2016-02-01

    We examine the internal gravity wave (IGW) spectrum in two sets of high-resolution global ocean simulations that are forced concurrently by atmospheric fields and the astronomical tidal potential. We analyze global 1/12th and 1/25th degree HYCOM simulations, and global 1/12th, 1/24th, and 1/48th degree simulations of the MITgcm. We are motivated by the central role that IGWs play in ocean mixing, by operational considerations of the US Navy, which runs HYCOM as an ocean forecast model, and by the impact of the IGW continuum on the sea surface height (SSH) measurements that will be taken by the planned NASA/CNES SWOT wide-swath altimeter mission. We (1) compute the IGW horizontal wavenumber-frequency spectrum of kinetic energy, and interpret the results with linear dispersion relations computed from the IGW Sturm-Liouville problem, (2) compute and similarly interpret nonlinear spectral kinetic energy transfers in the IGW band, (3) compute and similarly interpret IGW contributions to SSH variance, (4) perform comparisons of modeled IGW kinetic energy frequency spectra with moored current meter observations, and (5) perform comparisons of modeled IGW kinetic energy vertical wavenumber-frequency spectra with moored observations. This presentation builds upon our work in Muller et al. (2015, GRL), who performed tasks (1), (2), and (4) in 1/12th and 1/25th degree HYCOM simulations, for one region of the North Pacific. New for this presentation are tasks (3) and (5), the inclusion of MITgcm solutions, and the analysis of additional ocean regions.

  14. Projected Impact of Climate Change on the Water and Salt Budgets of the Arctic Ocean by a Global Climate Model

    Science.gov (United States)

    Miller, James R.; Russell, Gary L.

    1996-01-01

    The annual flux of freshwater into the Arctic Ocean by the atmosphere and rivers is balanced by the export of sea ice and oceanic freshwater. Two 150-year simulations of a global climate model are used to examine how this balance might change if atmospheric greenhouse gases (GHGs) increase. Relative to the control, the last 50-year period of the GHG experiment indicates that the total inflow of water from the atmosphere and rivers increases by 10% primarily due to an increase in river discharge, the annual sea-ice export decreases by about half, the oceanic liquid water export increases, salinity decreases, sea-ice cover decreases, and the total mass and sea-surface height of the Arctic Ocean increase. The closed, compact, and multi-phased nature of the hydrologic cycle in the Arctic Ocean makes it an ideal test of water budgets that could be included in model intercomparisons.

  15. Risks of ocean acidification in the California Current food web and fisheries: ecosystem model projections.

    Science.gov (United States)

    Marshall, Kristin N; Kaplan, Isaac C; Hodgson, Emma E; Hermann, Albert; Busch, D Shallin; McElhany, Paul; Essington, Timothy E; Harvey, Chris J; Fulton, Elizabeth A

    2017-04-01

    The benefits and ecosystem services that humans derive from the oceans are threatened by numerous global change stressors, one of which is ocean acidification. Here, we describe the effects of ocean acidification on an upwelling system that already experiences inherently low pH conditions, the California Current. We used an end-to-end ecosystem model (Atlantis), forced by downscaled global climate models and informed by a meta-analysis of the pH sensitivities of local taxa, to investigate the direct and indirect effects of future pH on biomass and fisheries revenues. Our model projects a 0.2-unit drop in pH during the summer upwelling season from 2013 to 2063, which results in wide-ranging magnitudes of effects across guilds and functional groups. The most dramatic direct effects of future pH may be expected on epibenthic invertebrates (crabs, shrimps, benthic grazers, benthic detritivores, bivalves), and strong indirect effects expected on some demersal fish, sharks, and epibenthic invertebrates (Dungeness crab) because they consume species known to be sensitive to changing pH. The model's pelagic community, including marine mammals and seabirds, was much less influenced by future pH. Some functional groups were less affected to changing pH in the model than might be expected from experimental studies in the empirical literature due to high population productivity (e.g., copepods, pteropods). Model results suggest strong effects of reduced pH on nearshore state-managed invertebrate fisheries, but modest effects on the groundfish fishery because individual groundfish species exhibited diverse responses to changing pH. Our results provide a set of projections that generally support and build upon previous findings and set the stage for hypotheses to guide future modeling and experimental analysis on the effects of OA on marine ecosystems and fisheries. © 2017 John Wiley & Sons Ltd.

  16. Development of a Coupled Ocean-Hydrologic Model to Simulate Pollutant Transport in Singapore Coastal Waters

    Science.gov (United States)

    Chua, V. P.

    2015-12-01

    Intensive agricultural, economic and industrial activities in Singapore and Malaysia have made our coastal areas under high risk of water pollution. A coupled ocean-hydrologic model is employed to perform three-dimensional simulations of flow and pollutant transport in Singapore coastal waters. The hydrologic SWAT model is coupled with the coastal ocean SUNTANS model by outputting streamflow and pollutant concentrations from the SWAT model and using them as inputs for the SUNTANS model at common boundary points. The coupled model is calibrated with observed sea surface elevations and velocities, and high correlation coefficients that exceed 0.97 and 0.91 are found for sea surface elevations and velocities, respectively. The pollutants are modeled as Gaussian passive tracers, and are released at five upstream locations in Singapore coastal waters. During the Northeast monsoon, pollutants released in Source 1 (Johor River), Source 2 (Tiram River), Source 3 (Layang River) and Source 4 (Layau River) enter the Singapore Strait after 4 days of release and reach Sentosa Island within 9 days. Meanwhile, pollutants released in Source 5 (Kallang River) reach Sentosa Island after 4 days. During the Southwest monsoon, the dispersion time is roughly doubled, with pollutants from Sources 1 - 4 entering the Singapore Strait only after 12 days of release due to weak currents.

  17. Numerical model of crustal accretion and cooling rates of fast-spreading mid-ocean ridges

    Directory of Open Access Journals (Sweden)

    P. Machetel

    2013-10-01

    Full Text Available We designed a thermo-mechanical numerical model for fast-spreading mid-ocean ridge with variable viscosity, hydrothermal cooling, latent heat release, sheeted dyke layer, and variable melt intrusion possibilities. The model allows for modulating several accretion possibilities such as the "gabbro glacier" (G, the "sheeted sills" (S or the "mixed shallow and MTZ lenses" (M. These three crustal accretion modes have been explored assuming viscosity contrasts of 2 to 3 orders of magnitude between strong and weak phases and various hydrothermal cooling conditions depending on the cracking temperatures value. Mass conservation (stream-function, momentum (vorticity and temperature equations are solved in 2-D cartesian geometry using 2-D, alternate direction, implicit and semi-implicit finite-difference scheme. In a first step, an Eulerian approach is used solving iteratively the motion and temperature equations until reaching steady states. With this procedure, the temperature patterns and motions that are obtained for the various crustal intrusion modes and hydrothermal cooling hypotheses display significant differences near the mid-ocean ridge axis. In a second step, a Lagrangian approach is used, recording the thermal histories and cooling rates of tracers travelling from the ridge axis to their final emplacements in the crust far from the mid-ocean ridge axis. The results show that the tracer's thermal histories are depending on the temperature patterns and the crustal accretion modes near the mid-ocean ridge axis. The instantaneous cooling rates obtained from these thermal histories betray these discrepancies and might therefore be used to characterize the crustal accretion mode at the ridge axis. These deciphering effects are even more pronounced if we consider the average cooling rates occurring over a prescribed temperature range. Two situations were tested at 1275–1125 °C and 1050–850 °C. The first temperature range covers mainly the

  18. Analyzing Ocean Tracks: A model for student engagement in authentic scientific practices using data

    Science.gov (United States)

    Krumhansl, K.; Krumhansl, R.; Brown, C.; DeLisi, J.; Kochevar, R.; Sickler, J.; Busey, A.; Mueller-Northcott, J.; Block, B.

    2013-12-01

    The collection of large quantities of scientific data has not only transformed science, but holds the potential to transform teaching and learning by engaging students in authentic scientific work. Furthermore, it has become imperative in a data-rich world that students gain competency in working with and interpreting data. The Next Generation Science Standards reflect both the opportunity and need for greater integration of data in science education, and emphasize that both scientific knowledge and practice are essential elements of science learning. The process of enabling access by novice learners to data collected and used by experts poses significant challenges, however, recent research has demonstrated that barriers to student learning with data can be overcome by the careful design of data access and analysis tools that are specifically tailored to students. A group of educators at Education Development Center, Inc. (EDC) and scientists at Stanford University's Hopkins Marine Station are collaborating to develop and test a model for student engagement with scientific data using a web-based platform. This model, called Ocean Tracks: Investigating Marine Migrations in a Changing Ocean, provides students with the ability to plot and analyze tracks of migrating marine animals collected through the Tagging of Pacific Predators program. The interface and associated curriculum support students in identifying relationships between animal behavior and physical oceanographic variables (e.g. SST, chlorophyll, currents), making linkages between the living world and climate. Students are also supported in investigating possible sources of human impact to important biodiversity hotspots in the Pacific Ocean. The first round of classroom testing revealed that students were able to easily access and display data on the interface, and collect measurements from the animal tracks and oceanographic data layers. They were able to link multiple types of data to draw powerful

  19. Finding the 'lost years' in green turtles: insights from ocean circulation models and genetic analysis.

    Science.gov (United States)

    Putman, Nathan F; Naro-Maciel, Eugenia

    2013-10-07

    Organismal movement is an essential component of ecological processes and connectivity among ecosystems. However, estimating connectivity and identifying corridors of movement are challenging in oceanic organisms such as young turtles that disperse into the open sea and remain largely unobserved during a period known as 'the lost years'. Using predictions of transport within an ocean circulation model and data from published genetic analysis, we present to our knowledge, the first basin-scale hypothesis of distribution and connectivity among major rookeries and foraging grounds (FGs) of green turtles (Chelonia mydas) during their 'lost years'. Simulations indicate that transatlantic dispersal is likely to be common and that recurrent connectivity between the southwestern Indian Ocean and the South Atlantic is possible. The predicted distribution of pelagic juvenile turtles suggests that many 'lost years hotspots' are presently unstudied and located outside protected areas. These models, therefore, provide new information on possible dispersal pathways that link nesting beaches with FGs. These pathways may be of exceptional conservation concern owing to their importance for sea turtles during a critical developmental period.

  20. Theoretical model of laminar flow in a channel or tube under ocean conditions

    International Nuclear Information System (INIS)

    Yan, B.H.; Yu, L.; Yang, Y.H.

    2011-01-01

    Research highlights: → The theoretical model of laminar flow in channels under ocean conditions is established. → The frictional resistance coefficient and Nusselt number are also obtained. → The theoretical results are in agreement with experimental data. → The oscillation of parameters is induced by the tangential force. -- Abstract: The theoretical model of laminar flow in a channel or tube under ocean conditions is established. The velocity and temperature correlations are derived, and the frictional resistance coefficient and Nusselt number are also obtained. The theoretical results are in agreement with experimental data. The oscillation of parameters is induced by the tangential force due to ocean conditions. The effect of centrifugal and Coriolis forces on the flow is negligible. The effects of several parameters on the frictional resistance coefficient and Nusselt number are investigated. The oscillating amplitude of Nusselt number increases with the increasing of Prandtl number. Both the oscillating amplitudes of frictional resistance coefficient and Nusselt number increase with the increasing of rolling frequency.

  1. A reduced-dynamics variational approach for the assimilation of altimeter data into eddy-resolving ocean models

    Science.gov (United States)

    Yu, Peng; Morey, Steven L.; O'Brien, James J.

    A new method of assimilating sea surface height (SSH) data into ocean models is introduced and tested. Many features observable by satellite altimetry are approximated by the first baroclinic mode over much of the ocean, especially in the lower (but non-equatorial) and mid latitude regions. Based on this dynamical trait, a reduced-dynamics adjoint technique is developed and implemented with a three-dimensional model using vertical normal mode decomposition. To reduce the complexity of the variational data assimilation problem, the adjoint equations are based on a one-active-layer reduced-gravity model, which approximates the first baroclinic mode, as opposed to the full three-dimensional model equations. The reduced dimensionality of the adjoint model leads to lower computational cost than a traditional variational data assimilation algorithm. The technique is applicable to regions of the ocean where the SSH variability is dominated by the first baroclinic mode. The adjustment of the first baroclinic mode model fields dynamically transfers the SSH information to the deep ocean layers. The technique is developed in a modular fashion that can be readily implemented with many three-dimensional ocean models. For this study, the method is tested with the Navy Coastal Ocean Model (NCOM) configured to simulate the Gulf of Mexico.

  2. Mechanisms controlling primary and new production in a global ecosystem model – Part I: Validation of the biological simulation

    Directory of Open Access Journals (Sweden)

    E. E. Popova

    2006-01-01

    Full Text Available A global general circulation model coupled to a simple six-compartment ecosystem model is used to study the extent to which global variability in primary and export production can be realistically predicted on the basis of advanced parameterizations of upper mixed layer physics, without recourse to introducing extra complexity in model biology. The "K profile parameterization" (KPP scheme employed, combined with 6-hourly external forcing, is able to capture short-term periodic and episodic events such as diurnal cycling and storm-induced deepening. The model realistically reproduces various features of global ecosystem dynamics that have been problematic in previous global modelling studies, using a single generic parameter set. The realistic simulation of deep convection in the North Atlantic, and lack of it in the North Pacific and Southern Oceans, leads to good predictions of chlorophyll and primary production in these contrasting areas. Realistic levels of primary production are predicted in the oligotrophic gyres due to high frequency external forcing of the upper mixed layer (accompanying paper Popova et al., 2006 and novel parameterizations of zooplankton excretion. Good agreement is shown between model and observations at various JGOFS time series sites: BATS, KERFIX, Papa and HOT. One exception is the northern North Atlantic where lower grazing rates are needed, perhaps related to the dominance of mesozooplankton there. The model is therefore not globally robust in the sense that additional parameterizations are needed to realistically simulate ecosystem dynamics in the North Atlantic. Nevertheless, the work emphasises the need to pay particular attention to the parameterization of mixed layer physics in global ocean ecosystem modelling as a prerequisite to increasing the complexity of ecosystem models.

  3. Magnetization modeling in the north and equatorial Atlantic Ocean using MAGSAT data

    Science.gov (United States)

    Hayling, K. L.; Harrison, C. G. A.

    1986-01-01

    Magsat 2 x 2-deg scalar anomalous-magnetic-field data (Langel et al., 1982) for the northern and equatorial Atlantic are inverted and combined with physiographic data and laboratory results on the magnetization of oceanic rocks and the oceanic crust to construct models explaining the shorter-wavelength component of the anomalies. An annihilator is applied to the inversion results to eliminate reverse-magnetized sources and facilitate comparisons of areas inverted separately, and a latitude effect on source spacing is tentatively attributed to greater noise contamination at lower latitudes. It is found that remanent magnetization combined with considerable crustal thickening can best explain the high intensity levels observed, although viscous magnetization or contamination of the data by noncrustal sources must also be considered.

  4. Modeling the influence from ocean transport, mixing and grazing on phytoplankton diversity

    DEFF Research Database (Denmark)

    Adjou, Mohamed; Bendtsen, Jørgen; Richardson, Katherine

    2012-01-01

    Phytoplankton diversity, whether defined on the basis of functional groups or on the basis of numbers of individual species, is known to be heterogeneous throughout the global ocean. The factors regulating this diversity are generally poorly understood, although access to limiting nutrients...... in generating and maintaining diversity, we apply the model to quantify the potential role of zooplankton grazing and ocean transport for the coexistence of competing species and phytoplankton diversity. We analyze the sensitivity of phytoplankton biomass distributions to different types of grazing functional...... responses and show that preferential grazing on abundant species, for example as formulated by the Holling type III grazing function, is a key factor for maintaining species’ coexistence. Mixing and large-scale advection are shown to potentially have a significant impact on the distribution of phytoplankton...

  5. 3-D modelling the electric field due to ocean tidal flow and comparison with observations

    DEFF Research Database (Denmark)

    Kuvshinov, A.; Junge, A.; Utada, H.

    2006-01-01

    of the global distribution of the electric signal due to tidal ocean flow. We simulate the electric signals for two tidal constituents - lunar semidiurnal (M2) and diurnal (O1) tides. We assume a realistic Earth's conductivity model with a surface thin shell and 1-D mantle underneath. Simulations demonstrate...... that in some coastal regions the amplitudes of the electric field can reach 100 mV/km and 10 mV/km for M2 and O1 tides respectively. The changes of lithosphere resistance produce detectable changes in the tidal electric signals. We show that our predictions are in a good agreement with observations.......The tidal motion of the ocean water through the ambient magnetic field, generates secondary electric field. This motionally induced electric field can be detected in the sea or inland and has a potential for electrical soundings of the Earth. A first goal of the paper is to gain an understanding...

  6. Coupled climate model simulation of Holocene cooling events: oceanic feedback amplifies solar forcing

    Directory of Open Access Journals (Sweden)

    H. Renssen

    2006-01-01

    Full Text Available The coupled global atmosphere-ocean-vegetation model ECBilt-CLIO-VECODE is used to perform transient simulations of the last 9000 years, forced by variations in orbital parameters, atmospheric greenhouse gas concentrations and total solar irradiance (TSI. The objective is to study the impact of decadal-to-centennial scale TSI variations on Holocene climate variability. The simulations show that negative TSI anomalies increase the probability of temporary relocations of the site with deepwater formation in the Nordic Seas, causing an expansion of sea ice that produces additional cooling. The consequence is a characteristic climatic anomaly pattern with cooling over most of the North Atlantic region that is consistent with proxy evidence for Holocene cold phases. Our results thus suggest that the ocean is able to play an important role in amplifying centennial-scale climate variability.

  7. Ocean acidification over the next three centuries using a simple global climate carbon-cycle model: projections and sensitivities

    Energy Technology Data Exchange (ETDEWEB)

    Hartin, Corinne A.; Bond-Lamberty, Benjamin; Patel, Pralit; Mundra, Anupriya

    2016-08-01

    Continued oceanic uptake of anthropogenic CO2 is projected to significantly alter the chemistry of the upper oceans over the next three centuries, with potentially serious consequences for marine ecosystems. Relatively few models have the capability to make projections of ocean acidification, limiting our ability to assess the impacts and probabilities of ocean changes. In this study we examine the ability of Hector v1.1, a reduced-form global model, to project changes in the upper ocean carbonate system over the next three centuries, and quantify the model's sensitivity to parametric inputs. Hector is run under prescribed emission pathways from the Representative Concentration Pathways (RCPs) and compared to both observations and a suite of Coupled Model Intercomparison (CMIP5) model outputs. Current observations confirm that ocean acidification is already taking place, and CMIP5 models project significant changes occurring to 2300. Hector is consistent with the observational record within both the high- (> 55°) and low-latitude oceans (< 55°). The model projects low-latitude surface ocean pH to decrease from preindustrial levels of 8.17 to 7.77 in 2100, and to 7.50 in 2300; aragonite saturation levels (ΩAr) decrease from 4.1 units to 2.2 in 2100 and 1.4 in 2300 under RCP 8.5. These magnitudes and trends of ocean acidification within Hector are largely consistent with the CMIP5 model outputs, although we identify some small biases within Hector's carbonate system. Of the parameters tested, changes in [H+] are most sensitive to parameters that directly affect atmospheric CO2 concentrations – Q10 (terrestrial respiration temperature response) as well as changes in ocean circulation, while changes in ΩAr saturation levels are sensitive to changes in ocean salinity and Q10. We conclude that Hector is a robust tool well suited for rapid ocean acidification

  8. A 4.5 km resolution Arctic Ocean simulation with the global multi-resolution model FESOM 1.4

    Science.gov (United States)

    Wang, Qiang; Wekerle, Claudia; Danilov, Sergey; Wang, Xuezhu; Jung, Thomas

    2018-04-01

    In the framework of developing a global modeling system which can facilitate modeling studies on Arctic Ocean and high- to midlatitude linkage, we evaluate the Arctic Ocean simulated by the multi-resolution Finite Element Sea ice-Ocean Model (FESOM). To explore the value of using high horizontal resolution for Arctic Ocean modeling, we use two global meshes differing in the horizontal resolution only in the Arctic Ocean (24 km vs. 4.5 km). The high resolution significantly improves the model's representation of the Arctic Ocean. The most pronounced improvement is in the Arctic intermediate layer, in terms of both Atlantic Water (AW) mean state and variability. The deepening and thickening bias of the AW layer, a common issue found in coarse-resolution simulations, is significantly alleviated by using higher resolution. The topographic steering of the AW is stronger and the seasonal and interannual temperature variability along the ocean bottom topography is enhanced in the high-resolution simulation. The high resolution also improves the ocean surface circulation, mainly through a better representation of the narrow straits in the Canadian Arctic Archipelago (CAA). The representation of CAA throughflow not only influences the release of water masses through the other gateways but also the circulation pathways inside the Arctic Ocean. However, the mean state and variability of Arctic freshwater content and the variability of freshwater transport through the Arctic gateways appear not to be very sensitive to the increase in resolution employed here. By highlighting the issues that are independent of model resolution, we address that other efforts including the improvement of parameterizations are still required.

  9. Mixed layer depth calculation in deep convection regions in ocean numerical models

    Science.gov (United States)

    Courtois, Peggy; Hu, Xianmin; Pennelly, Clark; Spence, Paul; Myers, Paul G.

    2017-12-01

    Mixed Layer Depths (MLDs) diagnosed by conventional numerical models are generally based on a density difference with the surface (e.g., 0.01 kg.m-3). However, the temperature-salinity compensation and the lack of vertical resolution contribute to over-estimated MLD, especially in regions of deep convection. In the present work, we examined the diagnostic MLD, associated with the deep convection of the Labrador Sea Water (LSW), calculated with a simple density difference criterion. The over-estimated MLD led us to develop a new tool, based on an observational approach, to recalculate MLD from model output. We used an eddy-permitting, 1/12° regional configuration of the Nucleus for European Modelling of the Ocean (NEMO) to test and discuss our newly defined MLD. We compared our new MLD with that from observations, and we showed a major improvement with our new algorithm. To show the new MLD is not dependent on a single model and its horizontal resolution, we extended our analysis to include 1/4° eddy-permitting simulations, and simulations using the Modular Ocean Model (MOM) model.

  10. Modelling the light absorption coefficients of oceanic waters: Implications for underwater optical applications

    Science.gov (United States)

    Prabhakaran, Sai Shri; Sahu, Sanjay Kumar; Dev, Pravin Jeba; Shanmugam, Palanisamy

    2018-05-01

    Spectral absorption coefficients of particulate (algal and non-algal components) and dissolved substances are modelled and combined with the pure seawater component to determine the total light absorption coefficients of seawater in the Bay of Bengal. Two parameters namely chlorophyll-a (Chl) concentration and turbidity were measured using commercially available instruments with high sampling rates. For modelling the light absorption coefficients of oceanic waters, the measured data are classified into two broad groups - algal dominant and non-algal particle (NAP) dominant. With these criteria the individual absorption coefficients of phytoplankton and NAP were established based on their concentrations using an iterative method. To account for the spectral dependence of absorption by phytoplankton, the wavelength-dependent coefficients were introduced into the model. The CDOM absorption was determined by subtracting the individual absorption coefficients of phytoplankton and NAP from the measured total absorption data and then related to the Chl concentration. Validity of the model is assessed based on independent in-situ data from certain discrete locations in the Bay of Bengal. The total absorption coefficients estimated using the new model by considering the contributions of algal, non-algal and CDOM have good agreement with the measured total absorption data with the error range of 6.9 to 28.3%. Results obtained by the present model are important for predicting the propagation of the radiant energy within the ocean and interpreting remote sensing observation data.

  11. From laboratory manipulations to Earth system models: scaling calcification impacts of ocean acidification

    Directory of Open Access Journals (Sweden)

    J. R. Young

    2009-11-01

    Full Text Available The observed variation in the calcification responses of coccolithophores to changes in carbonate chemistry paints a highly incoherent picture, particularly for the most commonly cultured "species", Emiliania huxleyi. The disparity between magnitude and potentially even sign of the calcification change under simulated end-of-century ocean surface chemical changes (higher pCO2, lower pH and carbonate saturation, raises challenges to quantifying future carbon cycle impacts and feedbacks because it introduces significant uncertainty in parameterizations used for global models. Here we compile the results of coccolithophore carbonate chemistry manipulation experiments and review how ocean carbon cycle models have attempted to bridge the gap from experiments to global impacts. Although we can rule out methodological differences in how carbonate chemistry is altered as introducing an experimental bias, the absence of a consistent calcification response implies that model parameterizations based on small and differing subsets of experimental observations will lead to varying estimates for the global carbon cycle impacts of ocean acidification. We highlight two pertinent observations that might help: (1 the degree of coccolith calcification varies substantially, both between species and within species across different genotypes, and (2 the calcification response across mesocosm and shipboard incubations has so-far been found to be relatively consistent. By analogy to descriptions of plankton growth rate vs. temperature, such as the "Eppley curve", which seek to encapsulate the net community response via progressive assemblage change rather than the response of any single species, we posit that progressive future ocean acidification may drive a transition in dominance from more to less heavily calcified coccolithophores. Assemblage shift may be more important to integrated community calcification response than species

  12. Evidence of the return of past organic pollution in the ocean - a model study

    Science.gov (United States)

    Lammel, Gerhard; Stemmler, Irene

    2013-04-01

    Persistent organic pollutants are of great concern because of their long residence time and long-range transport potential in the environment and because they are readily bioaccumulated along food chains and toxic for wildlife and humans. Recovery of the environment from exposure to widespread and persistent chemical pollution is determined by the spatiotemporal emission pattern and storage capacity and transports in environmental compartments. We studied the 3D exposure of the global ocean changing over time in response to historic emissions of polychlorinated biphenyls (PCB) and dichlorodimephenyltrichloromethane (DDT), 1950-2010 using the multicompartment chemistry-transport model MPI-MCTM, which encompasses atmosphere (ECHAM5) and ocean general circulation models (MPIOM), dynamic sub-models for atmospheric aerosols and the marine biogeochemistry, two-dimensional surface compartments (topsoil, vegetation surfaces, ice, and temporal snow cover) and intercompartmental mass exchange process parameterisations [1-3]. The pollution wave received by the surface waters through atmospheric deposition is propagating downward. Besides considerable time lags with respect to the year of peak emission, temporal bimodal exposure to the pollutants is found in mid level and deep waters (200-1500 m) in some areas, e.g. in the western and eastern North Atlantic. This is a consequence of the combination of downward pollution transport by advection, diffusion, and particle settling. It is suggested that the combination of the same processes will lead to re-rise of pollutant concentrations in seawater in other regions in the future. References [1] Guglielmo F, Lammel G, Maier-Reimer E: Global environmental cycling of DDT and gamma-HCH in the 1980s - a study using a coupled atmosphere and ocean general circulation model. Chemosphere 76 (2009) 1509-1517 [2] Stemmler I, Lammel G: Cycling of DDT in the global oceans 1950-2002: World ocean returns the pollutant. Geophys. Res. Lett. 36

  13. The size distribution of marine atmospheric aerosol with regard to primary biological aerosol particles over the South Atlantic Ocean

    Science.gov (United States)

    Matthias-Maser, Sabine; Brinkmann, Jutta; Schneider, Wilhelm

    The marine atmosphere is characterized by particles which originate from the ocean and by those which reached the air by advection from the continent. The bubble-burst mechanism produces both sea salt as well as biological particles. The following article describes the determination of the size distribution of marine aerosol particles with special emphasis on the biological particles. Th data were obtained on three cruises with the German Research Vessel "METEOR" crossing the South Atlantic Ocean. The measurements showed that biological particles amount to 17% in number and 10% in volume concentration. Another type of particle became obvious in the marine atmosphere, the biologically contaminated particle, i.e. particles which consist partly (approximately up to one-third) of biological matter. Their concentration in the evaluated size class ( r>2 μm) is higher than the concentration of the pure biological particles. The concentrations vary over about one to two orders of magnitude during all cruises.

  14. Interaction between surface wind and ocean circulation in the Carolina Capes in a coupled low-order model

    Energy Technology Data Exchange (ETDEWEB)

    Xie, L.; Pietrafesa, L.J.; Raman, S.

    1997-03-18

    Interactions between surface winds and ocean currents over an east-coast continental shelf are studied using a simple mathematical model. The model physics include cross-shelf advection of sea surface temperature (SST) by Ekman drift, upwelling due to Ekman transport divergence, differential heating of the low-level atmosphere by a cross-shelf SST gradient, and the Coriolis effect. Additionally, the effects of diabatic cooling of surface waters due to air-sea heat exchange and of the vertical density stratification on the thickness of the upper ocean Ekman layer are considered. The model results are qualitatively consistent with observed wind-driven coastal ocean circulation and surface wind signatures induced by SST. This simple model also demonstrates that two-way air-sea interaction plays a significant role in the subtidal frequency variability of coastal ocean circulation and mesoscale variability of surface wind fields over coastal waters.

  15. Monthly and Fortnightly Tidal Variations of the Earth's Rotation Rate Predicted by a TOPEX/POSEIDON Empirical Ocean Tide Model

    Science.gov (United States)

    Desai, S.; Wahr, J.

    1998-01-01

    Empirical models of the two largest constituents of the long-period ocean tides, the monthly and the fortnightly constituents, are estimated from repeat cycles 10 to 210 of the TOPEX/POSEIDON (T/P) mission.

  16. Dynamics and thermodynamics of the Indian Ocean warm pool in a high-resolution global general circulation model

    Digital Repository Service at National Institute of Oceanography (India)

    PrasannaKumar, S.; Ishida, A.; Yoneyama, K.; RameshKumar, M.R.; Kashino, Y.; Mitsudera, H.

    The time evolution of the Indian Ocean warm pool, studied using a global high-resolution general circulation model, shows strong seasonality. The warm pool has the largest spatial extent during April-May, and least in December. The spatio...

  17. The Development of a Degree 360 Expansion of the Dynamic Ocean Topography of the POCM_4B Global Circulation Model

    Science.gov (United States)

    Rapp, Richard H.

    1998-01-01

    This paper documents the development of a degree 360 expansion of the dynamic ocean topography (DOT) of the POCM_4B ocean circulation model. The principles and software used that led to the final model are described. A key principle was the development of interpolated DOT values into land areas to avoid discontinuities at or near the land/ocean interface. The power spectrum of the POCM_4B is also presented with comparisons made between orthonormal (ON) and spherical harmonic magnitudes to degree 24. A merged file of ON and SH computed degree variances is proposed for applications where the DOT power spectrum from low to high (360) degrees is needed.

  18. Reconstructing the Nd oceanic cycle using a coupled dynamical – biogeochemical model

    Directory of Open Access Journals (Sweden)

    T. Arsouze

    2009-12-01

    Full Text Available The decoupled behaviour observed between Nd isotopic composition (Nd IC, also referred as εNd and Nd concentration cycles has led to the notion of a "Nd paradox". While εNd behaves in a quasi-conservative way in the open ocean, leading to its broad use as a water-mass tracer, Nd concentration displays vertical profiles that increase with depth, together with a deep-water enrichment along the global thermohaline circulation. This non-conservative behaviour is typical of nutrients affected by scavenging in surface waters and remineralisation at depth. In addition, recent studies suggest the only way to reconcile both concentration and Nd IC oceanic budgets, is to invoke a "Boundary Exchange" process (BE, defined as the co-occurrence of transfer of elements from the margin to the sea with removal of elements from the sea by Boundary Scavenging as a source-sink term. However, these studies do not simulate the input/output fluxes of Nd to the ocean, and therefore prevents from crucial information that limits our understanding of Nd decoupling. To investigate this paradox on a global scale, this study uses for the first time a fully prognostic coupled dynamical/biogeochemical model with an explicit representation of Nd sources and sinks to simulate the Nd oceanic cycle. Sources considered include dissolved river fluxes, atmospheric dusts and margin sediment re-dissolution. Sinks are scavenging by settling particles. This model simulates the global features of the Nd oceanic cycle well, and produces a realistic distribution of Nd concentration (correct order of magnitude, increase with depth and along the conveyor belt, 65% of the simulated values fit in the ±10 pmol/kg envelop when compared to the data and isotopic composition (inter-basin gradient, characterization of the main water-masses, more than 70% of the simulated values fit in the ±3 εNd envelop when compared to the data, though a slight overestimation of

  19. Experimental assessment and modelling of nitrate utilisation for primary sludge.

    Science.gov (United States)

    Avcioğlu, E; Sözen, S; Orhon, D; van Loosdrecht, M C M

    2002-01-01

    Electron acceptor utilisation potential of filtered primary sludge under anoxic conditions was experimentally investigated. Major kinetic and stoichiometric parameters were assessed by means of model evaluation of nitrate profile obtained in batch reactors. ASM1, modified for endogenous decay, and ASM3 were used for model simulation. Both models provided consistent interpretation of experimental data. ASM1 yielded mu(H) and Y(HD) values of 6.1 d(-1) and 0.64 g cell COD(g COD)(-1) respectively for heterotrophic anoxic growth. The corresponding storage mechanism associated with ASM3 could be characterised by a k(STO) of 13 g COD (g COD d)(-1) and a Y(STO) of 0.78 g COD(g COD)(-1). The high k(STO) value suggests re-evaluation of the concept of readily biodegradable substrate as defined in ASM3 and tested in the study.

  20. Mantle properties and the MOR process: a new and versatile model for mid-ocean ridges

    Science.gov (United States)

    Osmaston, Miles

    2014-05-01

    Introduction. First I summarize the reasons why a radical departure from the current MOR model is now essential. I then outline the new model and its apparent versatility, not only in providing the observed contrasting spreading-rate-dependent characteristics but also some of the other common features of the MOR system which warrant clearer explanation. Ophiolites have been thought to provide on-land guidance but turn out to be a non-mid-ocean variant, outside the scope of this presentation. Seismic anisotropy and mantle mobility. Ever since the 1969 discovery [1] of seismic anisotropy in the uppermost oceanic mantle, this has been attributed to the shearing of olivine in a convectively driven MOR-divergent flow beneath the flanks. This would imply a high degree of rheological mobility of this mantle, but new constraints on its rheological properties and dynamical behaviour have come from two directions and need to be taken into account in forming a model. 1. Contrary to the seismologists' rule-book, the oceanic seismological Low Velocity Zone (LVZ) is no longer to be thought of as mobile, because the presence of interstitial melt strips out the water-weakening of the mineral structure [2, 3]. So we require a substitute for the divergent-flow model for MORs which, we find, also has other, apparently unrecognized, dynamical inconsistencies. One of these [4] is that there are in the record many rapid changes of spreading rate and direction, and ridge jumps. This cannot happen with a process driven by slow-to-change body forces, such as thermal convection. 2. My work on the global dynamic pattern for the past 150Ma (I will show examples) has shown [4 - 7] that the tectospheres of cratons must extend to very close to the bottom of the upper mantle (660km). The metasomatism of kimberlite xenoliths from >180km depth suggests that the reason for this downwards extent of 'keels' is the same as [3]. Phase changes. Another geodynamically important property apparently