A High-Rate, Single-Crystal Model including Phase Transformations, Plastic Slip, and Twinning
Energy Technology Data Exchange (ETDEWEB)
Addessio, Francis L. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bronkhorst, Curt Allan [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bolme, Cynthia Anne [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Explosive Science and Shock Physics Division; Brown, Donald William [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Cerreta, Ellen Kathleen [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lebensohn, Ricardo A. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lookman, Turab [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Luscher, Darby Jon [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Mayeur, Jason Rhea [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Morrow, Benjamin M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Rigg, Paulo A. [Washington State Univ., Pullman, WA (United States). Dept. of Physics. Inst. for Shock Physics
2016-08-09
An anisotropic, rate-dependent, single-crystal approach for modeling materials under the conditions of high strain rates and pressures is provided. The model includes the effects of large deformations, nonlinear elasticity, phase transformations, and plastic slip and twinning. It is envisioned that the model may be used to examine these coupled effects on the local deformation of materials that are subjected to ballistic impact or explosive loading. The model is formulated using a multiplicative decomposition of the deformation gradient. A plate impact experiment on a multi-crystal sample of titanium was conducted. The particle velocities at the back surface of three crystal orientations relative to the direction of impact were measured. Molecular dynamics simulations were conducted to investigate the details of the high-rate deformation and pursue issues related to the phase transformation for titanium. Simulations using the single crystal model were conducted and compared to the high-rate experimental data for the impact loaded single crystals. The model was found to capture the features of the experiments.
Qiuyang, He; Yue, Xu; Feifei, Zhao
2013-10-01
An accurate and complete circuit simulation model for single-photon avalanche diodes (SPADs) is presented. The derived model is not only able to simulate the static DC and dynamic AC behaviors of an SPAD operating in Geiger-mode, but also can emulate the second breakdown and the forward bias behaviors. In particular, it considers important statistical effects, such as dark-counting and after-pulsing phenomena. The developed model is implemented using the Verilog-A description language and can be directly performed in commercial simulators such as Cadence Spectre. The Spectre simulation results give a very good agreement with the experimental results reported in the open literature. This model shows a high simulation accuracy and very fast simulation rate.
Numerical models of single- and double-negative metamaterials including viscous and thermal losses
DEFF Research Database (Denmark)
Cutanda Henriquez, Vicente; Sánchez-Dehesa, José
2017-01-01
Negative index acoustic metamaterials are artificial structures made of subwavelength units arranged in a lattice, whose effective acoustic parameters, bulk modulus and mass density, can be negative. In these materials, sound waves propagate inside the periodic structure, assumed rigid, showing...... extraordinary properties. We are interested in two particular cases: a double-negative metamaterial, where both parameters are negative at some frequencies, and a single-negative metamaterial with negative bulk modulus within a broader frequency band. In previous research involving the double......-negative metamaterial, numerical models with viscous and thermal losses were used to explain that the extraordinary behavior, predicted by analytical models and numerical simulations with no losses, disappeared when the metamaterial was measured in physical setups. The improvement of the models is allowing now a more...
Modeling of single char combustion, including CO oxidation in its boundary layer
Energy Technology Data Exchange (ETDEWEB)
Lee, C.H.; Longwell, J.P.; Sarofim, A.F.
1994-10-25
The combustion of a char particle can be divided into a transient phase where its temperature increases as it is heated by oxidation, and heat transfer from the surrounding gas to an approximately constant temperature stage where gas phase reaction is important and which consumes most of the carbon and an extinction stage caused by carbon burnout. In this work, separate models were developed for the transient heating where gas phase reactions were unimportant and for the steady temperature stage where gas phase reactions were treated in detail. The transient char combustion model incorporates intrinsic char surface production of CO and CO{sub 2}, internal pore diffusion and external mass and heat transfer. The model provides useful information for particle ignition, burning temperature profile, combustion time, and carbon consumption rate. A gas phase reaction model incorporating the full set of 28 elementary C/H/O reactions was developed. This model calculated the gas phase CO oxidation reaction in the boundary layer at particle temperatures of 1250 K and 2500 K by using the carbon consumption rate and the burning temperature at the pseudo-steady state calculated from the temperature profile model but the transient heating was not included. This gas phase model can predict the gas species, and the temperature distributions in the boundary layer, the CO{sub 2}/CO ratio, and the location of CO oxidation. A mechanistic heat and mass transfer model was added to the temperature profile model to predict combustion behavior in a fluidized bed. These models were applied to data from the fluidized combustion of Newlands coal char particles. 52 refs., 60 figs.
Menke, William
2017-02-01
We prove that the problem of inverting Rayleigh wave phase velocity functions c( k ) , where k is wavenumber, for density ρ ( z ) , rigidity μ ( z ) and Lamé parameter λ ( z ) , where z is depth, is fully non-unique, at least in the highly-idealized case where the base Earth model is an isotropic half space. The model functions completely trade off. This is one special case of a common inversion scenario in which one seeks to determine several model functions from a single data function. We explore the circumstances under which this broad class of problems is unique, starting with very simple scenarios, building up to the somewhat more complicated (and common) case where data and model functions are related by convolutions, and then finally, to scale-independent problems (which include the Rayleigh wave problem). The idealized cases that we examine analytically provide insight into the kinds of nonuniqueness that are inherent in the much more complicated problems encountered in modern geophysical imaging (though they do not necessarily provide methods for solving those problems). We also define what is meant by a Backus and Gilbert resolution kernel in this kind of inversion and show under what circumstances a unique localized average of a single model function can be constructed.
Menke, William
2017-04-01
We prove that the problem of inverting Rayleigh wave phase velocity functions c( k ), where k is wavenumber, for density ρ ( z ), rigidity μ ( z ) and Lamé parameter λ ( z ), where z is depth, is fully non-unique, at least in the highly-idealized case where the base Earth model is an isotropic half space. The model functions completely trade off. This is one special case of a common inversion scenario in which one seeks to determine several model functions from a single data function. We explore the circumstances under which this broad class of problems is unique, starting with very simple scenarios, building up to the somewhat more complicated (and common) case where data and model functions are related by convolutions, and then finally, to scale-independent problems (which include the Rayleigh wave problem). The idealized cases that we examine analytically provide insight into the kinds of nonuniqueness that are inherent in the much more complicated problems encountered in modern geophysical imaging (though they do not necessarily provide methods for solving those problems). We also define what is meant by a Backus and Gilbert resolution kernel in this kind of inversion and show under what circumstances a unique localized average of a single model function can be constructed.
De Gaetano, Andrea; Panunzi, Simona; Matone, Alice; Samson, Adeline; Vrbikova, Jana; Bendlova, Bela; Pacini, Giovanni
2013-01-01
In order to provide a method for precise identification of insulin sensitivity from clinical Oral Glucose Tolerance Test (OGTT) observations, a relatively simple mathematical model (Simple Interdependent glucose/insulin MOdel SIMO) for the OGTT, which coherently incorporates commonly accepted physiological assumptions (incretin effect and saturating glucose-driven insulin secretion) has been developed. OGTT data from 78 patients in five different glucose tolerance groups were analyzed: normal glucose tolerance (NGT), impaired glucose tolerance (IGT), impaired fasting glucose (IFG), IFG+IGT, and Type 2 Diabetes Mellitus (T2DM). A comparison with the 2011 Salinari (COntinuos GI tract MOdel, COMO) and the 2002 Dalla Man (Dalla Man MOdel, DMMO) models was made with particular attention to insulin sensitivity indices ISCOMO, ISDMMO and kxgi (the insulin sensitivity index for SIMO). ANOVA on kxgi values across groups resulted significant overall (P<0.001), and post-hoc comparisons highlighted the presence of three different groups: NGT (8.62×10(-5)±9.36×10(-5) min(-1)pM(-1)), IFG (5.30×10(-5)±5.18×10(-5)) and combined IGT, IFG+IGT and T2DM (2.09×10(-5)±1.95×10(-5), 2.38×10(-5)±2.28×10(-5) and 2.38×10(-5)±2.09×10(-5) respectively). No significance was obtained when comparing ISCOMO or ISDMMO across groups. Moreover, kxgi presented the lowest sample average coefficient of variation over the five groups (25.43%), with average CVs for ISCOMO and ISDMMO of 70.32% and 57.75% respectively; kxgi also presented the strongest correlations with all considered empirical measures of insulin sensitivity. While COMO and DMMO appear over-parameterized for fitting single-subject clinical OGTT data, SIMO provides a robust, precise, physiologically plausible estimate of insulin sensitivity, with which habitual empirical insulin sensitivity indices correlate well. The kxgi index, reflecting insulin secretion dependency on glycemia, also significantly differentiates clinically
Directory of Open Access Journals (Sweden)
Andrea De Gaetano
Full Text Available In order to provide a method for precise identification of insulin sensitivity from clinical Oral Glucose Tolerance Test (OGTT observations, a relatively simple mathematical model (Simple Interdependent glucose/insulin MOdel SIMO for the OGTT, which coherently incorporates commonly accepted physiological assumptions (incretin effect and saturating glucose-driven insulin secretion has been developed. OGTT data from 78 patients in five different glucose tolerance groups were analyzed: normal glucose tolerance (NGT, impaired glucose tolerance (IGT, impaired fasting glucose (IFG, IFG+IGT, and Type 2 Diabetes Mellitus (T2DM. A comparison with the 2011 Salinari (COntinuos GI tract MOdel, COMO and the 2002 Dalla Man (Dalla Man MOdel, DMMO models was made with particular attention to insulin sensitivity indices ISCOMO, ISDMMO and kxgi (the insulin sensitivity index for SIMO. ANOVA on kxgi values across groups resulted significant overall (P<0.001, and post-hoc comparisons highlighted the presence of three different groups: NGT (8.62×10(-5±9.36×10(-5 min(-1pM(-1, IFG (5.30×10(-5±5.18×10(-5 and combined IGT, IFG+IGT and T2DM (2.09×10(-5±1.95×10(-5, 2.38×10(-5±2.28×10(-5 and 2.38×10(-5±2.09×10(-5 respectively. No significance was obtained when comparing ISCOMO or ISDMMO across groups. Moreover, kxgi presented the lowest sample average coefficient of variation over the five groups (25.43%, with average CVs for ISCOMO and ISDMMO of 70.32% and 57.75% respectively; kxgi also presented the strongest correlations with all considered empirical measures of insulin sensitivity. While COMO and DMMO appear over-parameterized for fitting single-subject clinical OGTT data, SIMO provides a robust, precise, physiologically plausible estimate of insulin sensitivity, with which habitual empirical insulin sensitivity indices correlate well. The kxgi index, reflecting insulin secretion dependency on glycemia, also significantly differentiates clinically
Including Magnetostriction in Micromagnetic Models
Conbhuí, Pádraig Ó.; Williams, Wyn; Fabian, Karl; Nagy, Lesleis
2016-04-01
The magnetic anomalies that identify crustal spreading are predominantly recorded by basalts formed at the mid-ocean ridges, whose magnetic signals are dominated by iron-titanium-oxides (Fe3-xTixO4), so called "titanomagnetites", of which the Fe2.4Ti0.6O4 (TM60) phase is the most common. With sufficient quantities of titanium present, these minerals exhibit strong magnetostriction. To date, models of these grains in the pseudo-single domain (PSD) range have failed to accurately account for this effect. In particular, a popular analytic treatment provided by Kittel (1949) for describing the magnetostrictive energy as an effective increase of the anisotropy constant can produce unphysical strains for non-uniform magnetizations. I will present a rigorous approach based on work by Brown (1966) and by Kroner (1958) for including magnetostriction in micromagnetic codes which is suitable for modelling hysteresis loops and finding remanent states in the PSD regime. Preliminary results suggest the more rigorously defined micromagnetic models exhibit higher coercivities and extended single domain ranges when compared to more simplistic approaches.
Cummings, E. Mark; Schermerhorn, Alice C.; Merrilees, Christine E.; Goeke-Morey, Marcie C.; Shirlow, Peter; Cairns, Ed
2013-01-01
Moving beyond simply documenting that political violence negatively impacts children, a social ecological hypothesis for relations between political violence and child outcomes was tested. Participants were 700 mother-child (M=12.1years, SD=1.8) dyads from 18 working class, socially deprived areas in Belfast, Northern Ireland, including single- and two-parent families. Sectarian community violence was associated with elevated family conflict and children’s reduced security about multiple aspects of their social environment (i.e., family, parent-child relations, and community), with links to child adjustment problems and reductions in prosocial behavior. By comparison, and consistent with expectations, links with negative family processes, child regulatory problems and child outcomes were less consistent for nonsectarian community violence. Support was found for a social ecological model for relations between political violence and child outcomes among both single and two parent families, with evidence that emotional security and adjustment problems were more negatively affected in single-parent families. The implications for understanding social ecologies of political violence and children’s functioning are discussed. PMID:20604605
Cummings, E. Mark; Schermerhorn, Alice C.; Merrilees, Christine E.; Goeke-Morey, Marcie C.; Shirlow, Peter; Cairns, Ed
2010-01-01
Moving beyond simply documenting that political violence negatively impacts children, a social ecological hypothesis for relations between political violence and child outcomes was tested. Participants were 700 mother-child (M=12.1years, SD=1.8) dyads from 18 working class, socially deprived areas in Belfast, Northern Ireland, including single- and two-parent families. Sectarian community violence was associated with elevated family conflict and children’s reduced security about multiple aspe...
Actuator assembly including a single axis of rotation locking member
Quitmeyer, James N.; Benson, Dwayne M.; Geck, Kellan P.
2009-12-08
An actuator assembly including an actuator housing assembly and a single axis of rotation locking member fixedly attached to a portion of the actuator housing assembly and an external mounting structure. The single axis of rotation locking member restricting rotational movement of the actuator housing assembly about at least one axis. The single axis of rotation locking member is coupled at a first end to the actuator housing assembly about a Y axis and at a 90.degree. angle to an X and Z axis providing rotation of the actuator housing assembly about the Y axis. The single axis of rotation locking member is coupled at a second end to a mounting structure, and more particularly a mounting pin, about an X axis and at a 90.degree. angle to a Y and Z axis providing rotation of the actuator housing assembly about the X axis. The actuator assembly is thereby restricted from rotation about the Z axis.
DEVELOPMENT OF WATER CIRCULATION MODEL INCLUDING IRRIGATION
Kotsuki, Shunji; Tanaka, Kenji; Kojiri, Toshiharu; Hamaguchi, Toshio
It is well known that since agricultural water withdrawal has much affect on water circulation system, accurate analysis of river discharge or water balance are difficult with less regard for it. In this study, water circulation model composed of land surface model and distributed runoff model is proposed at 10km 10km resolution. In this model, irrigation water, which is estimated with land surface model, is introduced to river discharge analysis. The model is applied to the Chao Phraya River in Thailand, and reproduced seasonal water balance. Additionally, the discharge on dry season simulated with the model is improved as a result of including irrigation. Since the model, which is basically developed from global data sets, simulated seasonal change of river discharge, it can be suggested that our model has university to other river basins.
An Integrated Biochemistry Laboratory, Including Molecular Modeling
Hall, Adele J. Wolfson Mona L.; Branham, Thomas R.
1996-11-01
) experience with methods of protein purification; (iii) incorporation of appropriate controls into experiments; (iv) use of basic statistics in data analysis; (v) writing papers and grant proposals in accepted scientific style; (vi) peer review; (vii) oral presentation of results and proposals; and (viii) introduction to molecular modeling. Figure 1 illustrates the modular nature of the lab curriculum. Elements from each of the exercises can be separated and treated as stand-alone exercises, or combined into short or long projects. We have been able to offer the opportunity to use sophisticated molecular modeling in the final module through funding from an NSF-ILI grant. However, many of the benefits of the research proposal can be achieved with other computer programs, or even by literature survey alone. Figure 1.Design of project-based biochemistry laboratory. Modules (projects, or portions of projects) are indicated as boxes. Each of these can be treated independently, or used as part of a larger project. Solid lines indicate some suggested paths from one module to the next. The skills and knowledge required for protein purification and design are developed in three units: (i) an introduction to critical assays needed to monitor degree of purification, including an evaluation of assay parameters; (ii) partial purification by ion-exchange techniques; and (iii) preparation of a grant proposal on protein design by mutagenesis. Brief descriptions of each of these units follow, with experimental details of each project at the end of this paper. Assays for Lysozyme Activity and Protein Concentration (4 weeks) The assays mastered during the first unit are a necessary tool for determining the purity of the enzyme during the second unit on purification by ion exchange. These assays allow an introduction to the concept of specific activity (units of enzyme activity per milligram of total protein) as a measure of purity. In this first sequence, students learn a turbidimetric assay
Models of bovine babesiosis including juvenile cattle.
Saad-Roy, C M; Shuai, Zhisheng; van den Driessche, P
2015-03-01
Bovine Babesiosis in cattle is caused by the transmission of protozoa of Babesia spp. by ticks as vectors. Juvenile cattle (Babesiosis, rarely show symptoms, and acquire immunity upon recovery. Susceptibility to the disease varies between breeds of cattle. Models of the dynamics of Bovine Babesiosis transmitted by the cattle tick that include these factors are formulated as systems of ordinary differential equations. Basic reproduction numbers are calculated, and it is proved that if these numbers are below the threshold value of one, then Bovine Babesiosis dies out. However, above the threshold number of one, the disease may approach an endemic state. In this case, control measures are suggested by determining target reproduction numbers. The percentage of a particular population (for example, the adult bovine population) needed to be controlled to eradicate the disease is evaluated numerically using Columbia data from the literature.
Seepage Model for PA Including Dift Collapse
Energy Technology Data Exchange (ETDEWEB)
G. Li; C. Tsang
2000-12-20
The purpose of this Analysis/Model Report (AMR) is to document the predictions and analysis performed using the Seepage Model for Performance Assessment (PA) and the Disturbed Drift Seepage Submodel for both the Topopah Spring middle nonlithophysal and lower lithophysal lithostratigraphic units at Yucca Mountain. These results will be used by PA to develop the probability distribution of water seepage into waste-emplacement drifts at Yucca Mountain, Nevada, as part of the evaluation of the long term performance of the potential repository. This AMR is in accordance with the ''Technical Work Plan for Unsaturated Zone (UZ) Flow and Transport Process Model Report'' (CRWMS M&O 2000 [153447]). This purpose is accomplished by performing numerical simulations with stochastic representations of hydrological properties, using the Seepage Model for PA, and evaluating the effects of an alternative drift geometry representing a partially collapsed drift using the Disturbed Drift Seepage Submodel. Seepage of water into waste-emplacement drifts is considered one of the principal factors having the greatest impact of long-term safety of the repository system (CRWMS M&O 2000 [153225], Table 4-1). This AMR supports the analysis and simulation that are used by PA to develop the probability distribution of water seepage into drift, and is therefore a model of primary (Level 1) importance (AP-3.15Q, ''Managing Technical Product Inputs''). The intended purpose of the Seepage Model for PA is to support: (1) PA; (2) Abstraction of Drift-Scale Seepage; and (3) Unsaturated Zone (UZ) Flow and Transport Process Model Report (PMR). Seepage into drifts is evaluated by applying numerical models with stochastic representations of hydrological properties and performing flow simulations with multiple realizations of the permeability field around the drift. The Seepage Model for PA uses the distribution of permeabilities derived from air injection testing in
Enhanced battery model including temperature effects
Rosca, B.; Wilkins, S.
2013-01-01
Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a dy
Enhanced battery model including temperature effects
Rosca, B.; Wilkins, S.
2013-01-01
Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a dy
Enhanced battery model including temperature effects
Rosca, B.; Wilkins, S.
2013-01-01
Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a
Metzler, Adam M; Siegmann, William L; Collins, Michael D
2012-02-01
The parabolic equation method with a single-scattering correction allows for accurate modeling of range-dependent environments in elastic layered media. For problems with large contrasts, accuracy and efficiency are gained by subdividing vertical interfaces into a series of two or more single-scattering problems. This approach generates several computational parameters, such as the number of interface slices, an iteration convergence parameter τ, and the number of iterations n for convergence. Using a narrow-angle approximation, the choices of n=1 and τ=2 give accurate solutions. Analogous results from the narrow-angle approximation extend to environments with larger variations when slices are used as needed at vertical interfaces. The approach is applied to a generic ocean waveguide that includes the generation of a Rayleigh interface wave. Results are presented in both frequency and time domains.
Bierkens, M.F.P.; Bron, W.A.
2000-01-01
The VIDENTE program contains a decision support system (DSS) to choose between different models for stochastic modelling of water-table depths, and a graphical user interface to facilitate operating and running four implemented models: KALMAX, KALTFN,SSDS and EMERALD. In self-contained parts each of
Institute of Scientific and Technical Information of China (English)
SONG Ruo-Long; WANG Ke-Xie; ZHANG Hong-Bing; HAN Wei
2007-01-01
A new method based on generalized reflection and transmission (R/T) coefficients method is proposed to calculate the single seismic phase (SSP) of cylindrically multilayered media including liquid interlayer. The use of normalization factors and normalized Lame coefficients makes the algorithm stable numerically. Using the modified R/T matrices, we derive the iterative expressions of generalized R/T matrices, and by using the iterative relation we determine the SSP of each interface and the full waveforms. To show the superiority of this new approach for investigating of reflection and transmission properties of cylindrically multilayered media, we simulate the full waveforms and SSPs of cased hole model with annulus Ⅰ (casing-cement interface) channelling (or,cross-flow). The generalized reflection coefficient spectra and SSPs of interfaces obtained show the propagation mechanism of each component of full waveform clearly.
Dynamic hysteresis modeling including skin effect using diffusion equation model
Hamada, Souad; Louai, Fatima Zohra; Nait-Said, Nasreddine; Benabou, Abdelkader
2016-07-01
An improved dynamic hysteresis model is proposed for the prediction of hysteresis loop of electrical steel up to mean frequencies, taking into account the skin effect. In previous works, the analytical solution of the diffusion equation for low frequency (DELF) was coupled with the inverse static Jiles-Atherton (JA) model in order to represent the hysteresis behavior for a lamination. In the present paper, this approach is improved to ensure the reproducibility of measured hysteresis loops at mean frequency. The results of simulation are compared with the experimental ones. The selected results for frequencies 50 Hz, 100 Hz, 200 Hz and 400 Hz are presented and discussed.
Dynamic hysteresis modeling including skin effect using diffusion equation model
Energy Technology Data Exchange (ETDEWEB)
Hamada, Souad, E-mail: souadhamada@yahoo.fr [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Louai, Fatima Zohra, E-mail: fz_louai@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Nait-Said, Nasreddine, E-mail: n_naitsaid@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Benabou, Abdelkader, E-mail: Abdelkader.Benabou@univ-lille1.fr [L2EP, Université de Lille1, 59655 Villeneuve d’Ascq (France)
2016-07-15
An improved dynamic hysteresis model is proposed for the prediction of hysteresis loop of electrical steel up to mean frequencies, taking into account the skin effect. In previous works, the analytical solution of the diffusion equation for low frequency (DELF) was coupled with the inverse static Jiles-Atherton (JA) model in order to represent the hysteresis behavior for a lamination. In the present paper, this approach is improved to ensure the reproducibility of measured hysteresis loops at mean frequency. The results of simulation are compared with the experimental ones. The selected results for frequencies 50 Hz, 100 Hz, 200 Hz and 400 Hz are presented and discussed.
Unsteady panel method for complex configurations including wake modeling
CSIR Research Space (South Africa)
Van Zyl, Lourens H
2008-01-01
Full Text Available implementations of the DLM are however not very versatile in terms of geometries that can be modeled. The ZONA6 code offers a versatile surface panel body model including a separated wake model, but uses a pressure panel method for lifting surfaces. This paper...
Modeling Electric Double-Layers Including Chemical Reaction Effects
DEFF Research Database (Denmark)
Paz-Garcia, Juan Manuel; Johannesson, Björn; Ottosen, Lisbeth M.
2014-01-01
A physicochemical and numerical model for the transient formation of an electric double-layer between an electrolyte and a chemically-active flat surface is presented, based on a finite elements integration of the nonlinear Nernst-Planck-Poisson model including chemical reactions. The model works...
Circuit Modeling of a MEMS Varactor Including Dielectric Charging Dynamics
Giounanlis, P.; Andrade-Miceli, D.; Gorreta, S.; Pons-Nin, J.; Dominguez-Pumar, M.; Blokhina, E.
2016-10-01
Electrical models for MEMS varactors including the effect of dielectric charging dynamics are not available in commercial circuit simulators. In this paper a circuit model using lumped ideal elements available in the Cadence libraries and a basic Verilog-A model, has been implemented. The model has been used to simulate the dielectric charging in function of time and its effects over the MEMS capacitance value.
Including investment risk in large-scale power market models
DEFF Research Database (Denmark)
Lemming, Jørgen Kjærgaard; Meibom, P.
2003-01-01
can be included in large-scale partial equilibrium models of the power market. The analyses are divided into a part about risk measures appropriate for power market investors and a more technical part about the combination of a risk-adjustment model and a partial-equilibrium model. To illustrate......Long-term energy market models can be used to examine investments in production technologies, however, with market liberalisation it is crucial that such models include investment risks and investor behaviour. This paper analyses how the effect of investment risk on production technology selection...... the analyses quantitatively, a framework based on an iterative interaction between the equilibrium model and a separate risk-adjustment module was constructed. To illustrate the features of the proposed modelling approach we examined how uncertainty in demand and variable costs affects the optimal choice...
Progressive IRP Models for Power Resources Including EPP
Directory of Open Access Journals (Sweden)
Yiping Zhu
2017-01-01
Full Text Available In the view of optimizing regional power supply and demand, the paper makes effective planning scheduling of supply and demand side resources including energy efficiency power plant (EPP, to achieve the target of benefit, cost, and environmental constraints. In order to highlight the characteristics of different supply and demand resources in economic, environmental, and carbon constraints, three planning models with progressive constraints are constructed. Results of three models by the same example show that the best solutions to different models are different. The planning model including EPP has obvious advantages considering pollutant and carbon emission constraints, which confirms the advantages of low cost and emissions of EPP. The construction of progressive IRP models for power resources considering EPP has a certain reference value for guiding the planning and layout of EPP within other power resources and achieving cost and environmental objectives.
Modeling heart rate variability including the effect of sleep stages
Soliński, Mateusz; Gierałtowski, Jan; Żebrowski, Jan
2016-02-01
We propose a model for heart rate variability (HRV) of a healthy individual during sleep with the assumption that the heart rate variability is predominantly a random process. Autonomic nervous system activity has different properties during different sleep stages, and this affects many physiological systems including the cardiovascular system. Different properties of HRV can be observed during each particular sleep stage. We believe that taking into account the sleep architecture is crucial for modeling the human nighttime HRV. The stochastic model of HRV introduced by Kantelhardt et al. was used as the initial starting point. We studied the statistical properties of sleep in healthy adults, analyzing 30 polysomnographic recordings, which provided realistic information about sleep architecture. Next, we generated synthetic hypnograms and included them in the modeling of nighttime RR interval series. The results of standard HRV linear analysis and of nonlinear analysis (Shannon entropy, Poincaré plots, and multiscale multifractal analysis) show that—in comparison with real data—the HRV signals obtained from our model have very similar properties, in particular including the multifractal characteristics at different time scales. The model described in this paper is discussed in the context of normal sleep. However, its construction is such that it should allow to model heart rate variability in sleep disorders. This possibility is briefly discussed.
A hydrodynamic model for granular material flows including segregation effects
Gilberg, Dominik; Klar, Axel; Steiner, Konrad
2017-06-01
The simulation of granular flows including segregation effects in large industrial processes using particle methods is accurate, but very time-consuming. To overcome the long computation times a macroscopic model is a natural choice. Therefore, we couple a mixture theory based segregation model to a hydrodynamic model of Navier-Stokes-type, describing the flow behavior of the granular material. The granular flow model is a hybrid model derived from kinetic theory and a soil mechanical approach to cover the regime of fast dilute flow, as well as slow dense flow, where the density of the granular material is close to the maximum packing density. Originally, the segregation model has been formulated by Thornton and Gray for idealized avalanches. It is modified and adapted to be in the preferred form for the coupling. In the final coupled model the segregation process depends on the local state of the granular system. On the other hand, the granular system changes as differently mixed regions of the granular material differ i.e. in the packing density. For the modeling process the focus lies on dry granular material flows of two particle types differing only in size but can be easily extended to arbitrary granular mixtures of different particle size and density. To solve the coupled system a finite volume approach is used. To test the model the rotational mixing of small and large particles in a tumbler is simulated.
Synaptic channel model including effects of spike width variation
2015-01-01
Synaptic Channel Model Including Effects of Spike Width Variation Hamideh Ramezani Next-generation and Wireless Communications Laboratory (NWCL) Department of Electrical and Electronics Engineering Koc University, Istanbul, Turkey Ozgur B. Akan Next-generation and Wireless Communications Laboratory (NWCL) Department of Electrical and Electronics Engineering Koc University, Istanbul, Turkey ABSTRACT An accu...
A sonic boom propagation model including mean flow atmospheric effects
Salamone, Joe; Sparrow, Victor W.
2012-09-01
This paper presents a time domain formulation of nonlinear lossy propagation in onedimension that also includes the effects of non-collinear mean flow in the acoustic medium. The model equation utilized is an augmented Burgers equation that includes the effects of nonlinearity, geometric spreading, atmospheric stratification, and also absorption and dispersion due to thermoviscous and molecular relaxation effects. All elements of the propagation are implemented in the time domain and the effects of non-collinear mean flow are accounted for in each term of the model equation. Previous authors have presented methods limited to showing the effects of wind on ray tracing and/or using an effective speed of sound in their model equation. The present work includes the effects of mean flow for all terms included in the augmented Burgers equation with all of the calculations performed in the time-domain. The capability to include the effects of mean flow in the acoustic medium allows one to make predictions more representative of real-world atmospheric conditions. Examples are presented for nonlinear propagation of N-waves and shaped sonic booms. [Work supported by Gulfstream Aerospace Corporation.
Global model including multistep ionizations in helium plasmas
Oh, Seung-Ju; Lee, Hyo-Chang; Chung, Chin-Wook
2016-12-01
Particle and power balance equations including stepwise ionizations are derived and solved in helium plasmas. In the balance equations, two metastable states (21S1 in singlet and 23S1 triplet) are considered and the followings are obtained. The plasma density linearly increases and the electron temperature is relatively in a constant value against the absorbed power. It is also found that the contribution to multi-step ionization with respect to the single-step ionization is in the range of 8%-23%, as the gas pressure increases from 10 mTorr to 100 mTorr. Compared to the results in the argon plasma, there is little variation in the collisional energy loss per electron-ion pair created (ɛc) with absorbed power and gas pressure due to the small collision cross section and higher inelastic collision threshold energy.
Human sperm chromatin stabilization: a proposed model including zinc bridges.
Björndahl, Lars; Kvist, Ulrik
2010-01-01
The primary focus of this review is to challenge the current concepts on sperm chromatin stability. The observations (i) that zinc depletion at ejaculation allows a rapid and total sperm chromatin decondensation without the addition of exogenous disulfide cleaving agents and (ii) that the human sperm chromatin contains one zinc for every protamine for every turn of the DNA helix suggest an alternative model for sperm chromatin structure may be plausible. An alternative model is therefore proposed, that the human spermatozoon could at ejaculation have a rapidly reversible zinc dependent chromatin stability: Zn(2+) stabilizes the structure and prevents the formation of excess disulfide bridges by a single mechanism, the formation of zinc bridges with protamine thiols of cysteine and potentially imidazole groups of histidine. Extraction of zinc enables two biologically totally different outcomes: immediate decondensation if chromatin fibers are concomitantly induced to repel (e.g. by phosphorylation in the ooplasm); otherwise freed thiols become committed into disulfide bridges creating a superstabilized chromatin. Spermatozoa in the zinc rich prostatic fluid (normally the first expelled ejaculate fraction) represent the physiological situation. Extraction of chromatin zinc can be accomplished by the seminal vesicular fluid. Collection of the ejaculate in one single container causes abnormal contact between spermatozoa and seminal vesicular fluid affecting the sperm chromatin stability. There are men in infertile couples with low content of sperm chromatin zinc due to loss of zinc during ejaculation and liquefaction. Tests for sperm DNA integrity may give false negative results due to decreased access for the assay to the DNA in superstabilized chromatin.
A model of Barchan dunes including lateral shear stress.
Schwämmle, V; Herrmann, H J
2005-01-01
Barchan dunes are found where sand availability is low and wind direction quite constant. The two dimensional shear stress of the wind field and the sand movement by saltation and avalanches over a barchan dune are simulated. The model with one dimensional shear stress is extended including surface diffusion and lateral shear stress. The resulting final shape is compared to the results of the model with a one dimensional shear stress and confirmed by comparison to measurements. We found agreement and improvements with respect to the model with one dimensional shear stress. Additionally, a characteristic edge at the center of the windward side is discovered which is also observed for big barchans. Diffusion effects reduce this effect for small dunes.
Goldilocks Models of Higher-Dimensional Inflation (including modulus stabilization)
Burgess, C P; Hayman, Peter; Patil, Subodh P
2016-01-01
We explore the mechanics of inflation in simplified extra-dimensional models involving an inflaton interacting with the Einstein-Maxwell system in two extra dimensions. The models are Goldilocks-like in that they are just complicated enough to include a mechanism to stabilize the extra-dimensional size, yet simple enough to solve the full 6D field equations using basic tools. The solutions are not limited to the effective 4D regime with H m_KK, but when they do standard 4D fluctuation calculations need not apply. When in a 4D regime the solutions predict eta ~ 0 hence n_s ~ 0.96 and r ~ 0.096 and so are ruled out if tensor modes remain unseen. Analysis of general parameters is difficult without a full 6D fluctuation calculation.
Modelization of a water tank including a PCM module
Energy Technology Data Exchange (ETDEWEB)
Ibanez, Manuel [Dept. de Medi Ambient i Ciencies del Sol, Universitat de Lleida, Rovira Roure 191, 25198 Lleida (Spain); Cabeza, Luisa F.; Sole, Cristian; Roca, Joan; Nogues, Miquel [Dept. d' Informatica i Eng. Industrial, Universitat de Lleida, Jaume II 69, 25001 Lleida (Spain)
2006-08-15
The reduction of CO{sub 2} emissions is a key component for today's governments. Therefore, implementation of more and more systems with renewable energies is necessary. Solar systems for single family houses or residential buildings need a big water tank that many times is not easy to locate. This paper studies the modelization of a new technology where PCM modules are implemented in domestic hot water tanks to reduce their size without reducing the energy stored. A new TRNSYS component, based in the already existing TYPE 60, was developed, called TYPE 60PCM. After tuning the new component with experimental results, two more experiences were developed to validate the simulation of a water tank with two cylindrical PCM modules using type 60PCM, the cooldown and reheating experiments. Concordance between experimental and simulated data was very good. Since the new TRNSYS component was developed to simulate full solar systems, comparison of experimental results from a pilot plant solar system with simulations were performed, and they confirmed that the type 60PCM is a powerful tool to evaluate the performance of PCM modules in water tanks. (author)
Kinetic models of gene expression including non-coding RNAs
Zhdanov, Vladimir P.
2011-03-01
In cells, genes are transcribed into mRNAs, and the latter are translated into proteins. Due to the feedbacks between these processes, the kinetics of gene expression may be complex even in the simplest genetic networks. The corresponding models have already been reviewed in the literature. A new avenue in this field is related to the recognition that the conventional scenario of gene expression is fully applicable only to prokaryotes whose genomes consist of tightly packed protein-coding sequences. In eukaryotic cells, in contrast, such sequences are relatively rare, and the rest of the genome includes numerous transcript units representing non-coding RNAs (ncRNAs). During the past decade, it has become clear that such RNAs play a crucial role in gene expression and accordingly influence a multitude of cellular processes both in the normal state and during diseases. The numerous biological functions of ncRNAs are based primarily on their abilities to silence genes via pairing with a target mRNA and subsequently preventing its translation or facilitating degradation of the mRNA-ncRNA complex. Many other abilities of ncRNAs have been discovered as well. Our review is focused on the available kinetic models describing the mRNA, ncRNA and protein interplay. In particular, we systematically present the simplest models without kinetic feedbacks, models containing feedbacks and predicting bistability and oscillations in simple genetic networks, and models describing the effect of ncRNAs on complex genetic networks. Mathematically, the presentation is based primarily on temporal mean-field kinetic equations. The stochastic and spatio-temporal effects are also briefly discussed.
Progress Towards an LES Wall Model Including Unresolved Roughness
Craft, Kyle; Redman, Andrew; Aikens, Kurt
2015-11-01
Wall models used in large eddy simulations (LES) are often based on theories for hydraulically smooth walls. While this is reasonable for many applications, there are also many where the impact of surface roughness is important. A previously developed wall model has been used primarily for jet engine aeroacoustics. However, jet simulations have not accurately captured thick initial shear layers found in some experimental data. This may partly be due to nozzle wall roughness used in the experiments to promote turbulent boundary layers. As a result, the wall model is extended to include the effects of unresolved wall roughness through appropriate alterations to the log-law. The methodology is tested for incompressible flat plate boundary layers with different surface roughness. Correct trends are noted for the impact of surface roughness on the velocity profile. However, velocity deficit profiles and the Reynolds stresses do not collapse as well as expected. Possible reasons for the discrepancies as well as future work will be presented. This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number ACI-1053575. Computational resources on TACC Stampede were provided under XSEDE allocation ENG150001.
Numerical Modeling of Electroacoustic Logging Including Joule Heating
Plyushchenkov, Boris D.; Nikitin, Anatoly A.; Turchaninov, Victor I.
It is well known that electromagnetic field excites acoustic wave in a porous elastic medium saturated with fluid electrolyte due to electrokinetic conversion effect. Pride's equations describing this process are written in isothermal approximation. Update of these equations, which allows to take influence of Joule heating on acoustic waves propagation into account, is proposed here. This update includes terms describing the initiation of additional acoustic waves excited by thermoelastic stresses and the heat conduction equation with right side defined by Joule heating. Results of numerical modeling of several problems of propagation of acoustic waves excited by an electric field source with and without consideration of Joule heating effect in their statements are presented. From these results, it follows that influence of Joule heating should be taken into account at the numerical simulation of electroacoustic logging and at the interpretation of its log data.
Goldilocks models of higher-dimensional inflation (including modulus stabilization)
Burgess, C. P.; Enns, Jared J. H.; Hayman, Peter; Patil, Subodh P.
2016-08-01
We explore the mechanics of inflation within simplified extra-dimensional models involving an inflaton interacting with the Einstein-Maxwell system in two extra dimensions. The models are Goldilocks-like inasmuch as they are just complicated enough to include a mechanism to stabilize the extra-dimensional size (or modulus), yet simple enough to solve explicitly the full extra-dimensional field equations using only simple tools. The solutions are not restricted to the effective 4D regime with H ll mKK (the latter referring to the characteristic mass splitting of the Kaluza-Klein excitations) because the full extra-dimensional Einstein equations are solved. This allows an exploration of inflationary physics in a controlled calculational regime away from the usual four-dimensional lamp-post. The inclusion of modulus stabilization is important because experience with string models teaches that this is usually what makes models fail: stabilization energies easily dominate the shallow potentials required by slow roll and so open up directions to evolve that are steeper than those of the putative inflationary direction. We explore (numerically and analytically) three representative kinds of inflationary scenarios within this simple setup. In one the radion is trapped in an inflaton-dependent local minimum whose non-zero energy drives inflation. Inflation ends as this energy relaxes to zero when the inflaton finds its own minimum. The other two involve power-law scaling solutions during inflation. One of these is a dynamical attractor whose features are relatively insensitive to initial conditions but whose slow-roll parameters cannot be arbitrarily small; the other is not an attractor but can roll much more slowly, until eventually transitioning to the attractor. The scaling solutions can satisfy H > mKK, but when they do standard 4D fluctuation calculations need not apply. When in a 4D regime the solutions predict η simeq 0 and so r simeq 0.11 when ns simeq 0.96 and so
Directory of Open Access Journals (Sweden)
M. D. Petters
2008-10-01
Full Text Available The ability of a particle to serve as a cloud condensation nucleus in the atmosphere is determined by its size, hygroscopicity and its solubility in water. Usually size and hygroscopicity alone are sufficient to predict CCN activity. Single parameter representations for hygroscopicity have been shown to successfully model complex, multicomponent particles types. Under the assumption of either complete solubility, or complete insolubility of a component, it is not necessary to explicitly include that component's solubility into the single parameter framework. This is not the case if sparingly soluble materials are present. In this work we explicitly account for solubility by modifying the single parameter equations. We demonstrate that sensitivity to the actual value of solubility emerges only in the regime of 2×10^{−1}–5×10^{−4}, where the solubility values are expressed as volume of solute per unit volume of water present in a saturated solution. Compounds that do not fall inside this sparingly soluble envelope can be adequately modeled assuming they are either infinitely soluble in water or completely insoluble.
Including spatial data in nutrient balance modelling on dairy farms
van Leeuwen, Maricke; van Middelaar, Corina; Stoof, Cathelijne; Oenema, Jouke; Stoorvogel, Jetse; de Boer, Imke
2017-04-01
The Annual Nutrient Cycle Assessment (ANCA) calculates the nitrogen (N) and phosphorus (P) balance at a dairy farm, while taking into account the subsequent nutrient cycles of the herd, manure, soil and crop components. Since January 2016, Dutch dairy farmers are required to use ANCA in order to increase understanding of nutrient flows and to minimize nutrient losses to the environment. A nutrient balance calculates the difference between nutrient inputs and outputs. Nutrients enter the farm via purchased feed, fertilizers, deposition and fixation by legumes (nitrogen), and leave the farm via milk, livestock, manure, and roughages. A positive balance indicates to which extent N and/or P are lost to the environment via gaseous emissions (N), leaching, run-off and accumulation in soil. A negative balance indicates that N and/or P are depleted from soil. ANCA was designed to calculate average nutrient flows on farm level (for the herd, manure, soil and crop components). ANCA was not designed to perform calculations of nutrient flows at the field level, as it uses averaged nutrient inputs and outputs across all fields, and it does not include field specific soil characteristics. Land management decisions, however, such as the level of N and P application, are typically taken at the field level given the specific crop and soil characteristics. Therefore the information that ANCA provides is likely not sufficient to support farmers' decisions on land management to minimize nutrient losses to the environment. This is particularly a problem when land management and soils vary between fields. For an accurate estimate of nutrient flows in a given farming system that can be used to optimize land management, the spatial scale of nutrient inputs and outputs (and thus the effect of land management and soil variation) could be essential. Our aim was to determine the effect of the spatial scale of nutrient inputs and outputs on modelled nutrient flows and nutrient use efficiencies
A Discrete Velocity Traffic Kinetic Model Including Desired Speed
Directory of Open Access Journals (Sweden)
Shoufeng Lu
2013-05-01
Full Text Available We introduce the desired speed variable into the table of games and formulate a new table of games and the corresponding discrete traffic kinetic model. We use the hybrid programming technique of VB and MATLAB to develop the program. Lastly, we compared the proposed model result and the detector data. The results show that the proposed model can describe the traffic flow evolution.
Semi-holographic model including the radiation component
del Campo, Sergio; Magaña, Juan; Villanueva, J R
2014-01-01
In this letter we study the semi holographic model which corresponds to the radiative version of the model proposed by Zhang et al. (Phys. Lett. B 694 (2010), 177) and revisited by C\\'ardenas et al. (Mon. Not. Roy. Astron. Soc. 438 (2014), 3603). This inclusion makes the model more realistic, so allows us to test it with current observational data and then answer if the inconsistency reported by C\\'ardenas et al. is relaxed.
A Fault Evolution Model Including the Rupture Dynamic Simulation
Wu, Y.; Chen, X.
2011-12-01
We perform a preliminary numerical simulation of seismicity and stress evolution along a strike-slip fault in a 3D elastic half space. Following work of Ben-Zion (1996), the fault geometry is devised as a vertical plane which is about 70 km long and 17 km wide, comparable to the size of San Andreas Fault around Parkfield. The loading mechanism is described by "backslip" method. The fault failure is governed by a static/kinetic friction law, and induced stress transfer is calculated with Okada's static solution. In order to track the rupture propagation in detail, we allow induced stress to propagate through the medium at the shear wave velocity by introducing a distance-dependent time delay to responses to stress changes. Current simulation indicates small to moderate earthquakes following the Gutenberg-Richter law and quasi-periodical characteristic large earthquakes, which are consistent with previous work by others. Next we will consider introducing a more realistic friction law, namely, the laboratory-derived rate- and state- dependent law, which can simulate more realistic and complicated sliding behavior such as the stable and unstable slip, the aseismic sliding and the slip nucleation process. In addition, the long duration of aftershocks is expected to be reproduced due to this time-dependent friction law, which is not available in current seismicity simulation. The other difference from previous work is that we are trying to include the dynamic ruptures in this study. Most previous study on seismicity simulation is based on the static solution when dealing with failure induced stress changes. However, studies of numerical simulation of rupture dynamics have revealed lots of important details which are missing in the quasi-static/quasi- dynamic simulation. For example, dynamic simulations indicate that the slip on the ground surface becomes larger if the dynamic rupture process reaches the free surface. The concentration of stress on the propagating crack
Single toxin dose-response models revisited
Glaholt, SP; Kyker-Snowman, E; Shaw, JR; Chen, CY
2016-01-01
The goal of this paper is to offer a rigorous analysis of the sigmoid shape single toxin dose-response relationship. The toxin efficacy function is introduced and four special points, including maximum toxin efficacy and inflection points, on the dose-response curve are defined. The special points define three phases of the toxin effect on mortality: (1) toxin concentrations smaller than the first inflection point or (2) larger then the second inflection point imply low mortality rate, and (3) concentrations between the first and the second inflection points imply high mortality rate. Probabilistic interpretation and mathematical analysis for each of four models, Hill, logit, probit, and Weibull is provided. Two general model extensions are introduced: (1) the multi-target hit model that accounts for the existence of several vital receptors affected by the toxin, and (2) model with a nonzero mortality at zero concentration to account for natural mortality. Special attention is given to statistical estimation in the framework of the generalized linear model with the binomial dependent variable as the mortality count in each experiment, contrary to the widespread nonlinear regression treating the mortality rate as continuous variable. The models are illustrated using standard EPA Daphnia acute (48 hours) toxicity tests with mortality as a function of NiCl or CuSO4 toxin. PMID:27847315
Evacuation modeling including traveler information and compliance behavior
Pel, A.J.; Hoogendoorn, S.P.; Bliemer, M.C.J.
2010-01-01
Traffic simulation models are often used to support decisions when planning an evacuation. Scenario analyses based on these models then typically focus on traffic dynamics and the effect of traffic control measures in order to locate possible bottlenecks and predict evacuation times. A clear approac
Global atmospheric model for mercury including oxidation by bromine atoms
Directory of Open Access Journals (Sweden)
C. D. Holmes
2010-12-01
Full Text Available Global models of atmospheric mercury generally assume that gas-phase OH and ozone are the main oxidants converting Hg^{0} to Hg^{II} and thus driving mercury deposition to ecosystems. However, thermodynamic considerations argue against the importance of these reactions. We demonstrate here the viability of atomic bromine (Br as an alternative Hg^{0} oxidant. We conduct a global 3-D simulation with the GEOS-Chem model assuming gas-phase Br to be the sole Hg^{0} oxidant (Hg + Br model and compare to the previous version of the model with OH and ozone as the sole oxidants (Hg + OH/O_{3} model. We specify global 3-D Br concentration fields based on our best understanding of tropospheric and stratospheric Br chemistry. In both the Hg + Br and Hg + OH/O_{3} models, we add an aqueous photochemical reduction of Hg^{II} in cloud to impose a tropospheric lifetime for mercury of 6.5 months against deposition, as needed to reconcile observed total gaseous mercury (TGM concentrations with current estimates of anthropogenic emissions. This added reduction would not be necessary in the Hg + Br model if we adjusted the Br oxidation kinetics downward within their range of uncertainty. We find that the Hg + Br and Hg + OH/O_{3} models are equally capable of reproducing the spatial distribution of TGM and its seasonal cycle at northern mid-latitudes. The Hg + Br model shows a steeper decline of TGM concentrations from the tropics to southern mid-latitudes. Only the Hg + Br model can reproduce the springtime depletion and summer rebound of TGM observed at polar sites; the snowpack component of GEOS-Chem suggests that 40% of Hg^{II} deposited to snow in the Arctic is transferred to the ocean and land reservoirs, amounting to a net deposition flux to the Arctic of 60 Mg a^{−1}. Summertime events of depleted Hg^{0} at Antarctic sites due to subsidence are much better simulated by
Pilot Wave model that includes creation and annihilation of particles
Sverdlov, Roman
2010-01-01
The purpose of this paper is to come up with a Pilot Wave model of quantum field theory that incorporates particle creation and annihilation without sacrificing determinism. This has been previously attempted in an article by the same author titled "Incorporating particle creation and annihilation in Pilot Wave model", in a much less satisfactory way. In this paper I would like to "clean up" some of the things. In particular, I would like to get rid of a very unnatural concept of "visibility" of particles, which makes the model much simpler. On the other hand, I would like to add a mechanism for decoherence, which was absent in the previous version.
Global atmospheric model for mercury including oxidation by bromine atoms
Directory of Open Access Journals (Sweden)
C. D. Holmes
2010-08-01
Full Text Available Global models of atmospheric mercury generally assume that OH and ozone are the main oxidants converting Hg^{0} to Hg^{II} and thus driving mercury deposition to ecosystems. However, thermodynamic considerations argue against the importance of these reactions. We demonstrate here the viability of atomic bromine (Br as an alternative Hg^{0} oxidant. We conduct a global 3-D simulation with the GEOS-Chem model assuming Br to be the sole Hg^{0} oxidant (Hg + Br model and compare to the previous version of the model with OH and ozone as the sole oxidants (Hg + OH/O_{3} model. We specify global 3-D Br concentration fields based on our best understanding of tropospheric and stratospheric Br chemistry. In both the Hg + Br and Hg + OH/O_{3} models, we add an aqueous photochemical reduction of Hg^{II} in cloud to impose a tropospheric lifetime for mercury of 6.5 months against deposition, as needed to reconcile observed total gaseous mercury (TGM concentrations with current estimates of anthropogenic emissions. This added reduction would not be necessary in the Hg + Br model if we adjusted the Br oxidation kinetics downward within their range of uncertainty. We find that the Hg + Br and Hg + OH/O_{3} models are equally capable of reproducing the spatial distribution of TGM and its seasonal cycle at northern mid-latitudes. The Hg + Br model shows a steeper decline of TGM concentrations from the tropics to southern mid-latitudes. Only the Hg + Br model can reproduce the springtime depletion and summer rebound of TGM observed at polar sites; the snowpack component of GEOS-Chem suggests that 40% of Hg^{II} deposited to snow in the Arctic is transferred to the ocean and land reservoirs, amounting to a net deposition flux of 60 Mg a^{−1}. Summertime events of depleted Hg^{0} at Antarctic sites due to subsidence are much better simulated by the Hg + Br model. Model
An Intracellular Calcium Oscillations Model Including Mitochondrial Calcium Cycling
Institute of Scientific and Technical Information of China (English)
SHI Xiao-Min; LIU Zeng-Rong
2005-01-01
@@ Calcium is a ubiquitous second messenger. Mitochondria contributes significantly to intracellular Ca2+ dynamics.The experiment of Kaftan et al. [J. Biol. Chem. 275(2000) 25465] demonstrated that inhibiting mitochondrial Ca2+ uptake can reduce the frequency of cytosolic Ca2+ concentration oscillations of gonadotropes. By considering the mitochondrial Ca2+ cycling we develop a three-variable model of intracellular Ca2+ oscillations based on the models of Atri et al. [Biophys. J. 65 (1993) 1727] and Falcke et al. [Biophys. J. 77 (1999) 37]. The model reproduces the fact that mitochondrial Ca2+ cycling increases the frequency of cytosolic Ca2+ oscillations, which accords with Kaftan's results. Moreover the model predicts that when the mitochondria overload with Ca2+, the cytosolic Ca2+ oscillations vanish, which may trigger apoptosis.
Cement-aggregate compatibility and structure property relationships including modelling
Energy Technology Data Exchange (ETDEWEB)
Jennings, H.M.; Xi, Y.
1993-07-15
The role of aggregate, and its interface with cement paste, is discussed with a view toward establishing models that relate structure to properties. Both short (nm) and long (mm) range structure must be considered. The short range structure of the interface depends not only on the physical distribution of the various phases, but also on moisture content and reactivity of aggregate. Changes that occur on drying, i.e. shrinkage, may alter the structure which, in turn, feeds back to alter further drying and shrinkage. The interaction is dynamic, even without further hydration of cement paste, and the dynamic characteristic must be considered in order to fully understand and model its contribution to properties. Microstructure and properties are two subjects which have been pursued somewhat separately. This review discusses both disciplines with a view toward finding common research goals in the future. Finally, comment is made on possible chemical reactions which may occur between aggregate and cement paste.
Including lateral interactions into microkinetic models of catalytic reactions
DEFF Research Database (Denmark)
Hellman, Anders; Honkala, Johanna Karoliina
2007-01-01
In many catalytic reactions lateral interactions between adsorbates are believed to have a strong influence on the reaction rates. We apply a microkinetic model to explore the effect of lateral interactions and how to efficiently take them into account in a simple catalytic reaction. Three differ...... different approximations are investigated: site, mean-field, and quasichemical approximations. The obtained results are compared to accurate Monte Carlo numbers. In the end, we apply the approximations to a real catalytic reaction, namely, ammonia synthesis....
Comparison of Joint Modeling Approaches Including Eulerian Sliding Interfaces
Energy Technology Data Exchange (ETDEWEB)
Lomov, I; Antoun, T; Vorobiev, O
2009-12-16
Accurate representation of discontinuities such as joints and faults is a key ingredient for high fidelity modeling of shock propagation in geologic media. The following study was done to improve treatment of discontinuities (joints) in the Eulerian hydrocode GEODYN (Lomov and Liu 2005). Lagrangian methods with conforming meshes and explicit inclusion of joints in the geologic model are well suited for such an analysis. Unfortunately, current meshing tools are unable to automatically generate adequate hexahedral meshes for large numbers of irregular polyhedra. Another concern is that joint stiffness in such explicit computations requires significantly reduced time steps, with negative implications for both the efficiency and quality of the numerical solution. An alternative approach is to use non-conforming meshes and embed joint information into regular computational elements. However, once slip displacement on the joints become comparable to the zone size, Lagrangian (even non-conforming) meshes could suffer from tangling and decreased time step problems. The use of non-conforming meshes in an Eulerian solver may alleviate these difficulties and provide a viable numerical approach for modeling the effects of faults on the dynamic response of geologic materials. We studied shock propagation in jointed/faulted media using a Lagrangian and two Eulerian approaches. To investigate the accuracy of this joint treatment the GEODYN calculations have been compared with results from the Lagrangian code GEODYN-L which uses an explicit treatment of joints via common plane contact. We explore two approaches to joint treatment in the code, one for joints with finite thickness and the other for tight joints. In all cases the sliding interfaces are tracked explicitly without homogenization or blending the joint and block response into an average response. In general, rock joints will introduce an increase in normal compliance in addition to a reduction in shear strength. In the
Neighboring extremal optimal control design including model mismatch errors
Energy Technology Data Exchange (ETDEWEB)
Kim, T.J. [Sandia National Labs., Albuquerque, NM (United States); Hull, D.G. [Texas Univ., Austin, TX (United States). Dept. of Aerospace Engineering and Engineering Mechanics
1994-11-01
The mismatch control technique that is used to simplify model equations of motion in order to determine analytic optimal control laws is extended using neighboring extremal theory. The first variation optimal control equations are linearized about the extremal path to account for perturbations in the initial state and the final constraint manifold. A numerical example demonstrates that the tuning procedure inherent in the mismatch control method increases the performance of the controls to the level of a numerically-determined piecewise-linear controller.
Double pendulum model for tennis stroke including a collision process
Youn, Sun-Hyun
2015-01-01
By means of adding a collision process between the ball and racket in double pendulum model, we analyzed the tennis stroke. It is possible that the speed of the rebound ball does not simply depend on the angular velocity of the racket, and higher angular velocity sometimes gives lower ball speed. We numerically showed that the proper time lagged racket rotation increases the speed of the rebound ball by 20%. We also showed that the elbow should move in order to add the angular velocity of the racket.
Modeling an elastic beam with piezoelectric patches by including magnetic effects
Ozer, A O
2014-01-01
Models for piezoelectric beams using Euler-Bernoulli small displacement theory predict the dynamics of slender beams at the low frequency accurately but are insufficient for beams vibrating at high frequencies or beams with low length-to-width aspect ratios. A more thorough model that includes the effects of rotational inertia and shear strain, Mindlin-Timoshenko small displacement theory, is needed to predict the dynamics more accurately for these cases. Moreover, existing models ignore the magnetic effects since the magnetic effects are relatively small. However, it was shown recently \\cite{O-M1} that these effects can substantially change the controllability and stabilizability properties of even a single piezoelectric beam. In this paper, we use a variational approach to derive models that include magnetic effects for an elastic beam with two piezoelectric patches actuated by different voltage sources. Both Euler-Bernoulli and Mindlin-Timoshenko small displacement theories are considered. Due to the magne...
Modelling of Dual-Junction Solar Cells including Tunnel Junction
Directory of Open Access Journals (Sweden)
Abdelaziz Amine
2013-01-01
Full Text Available Monolithically stacked multijunction solar cells based on III–V semiconductors materials are the state-of-art of approach for high efficiency photovoltaic energy conversion, in particular for space applications. The individual subcells of the multi-junction structure are interconnected via tunnel diodes which must be optically transparent and connect the component cells with a minimum electrical resistance. The quality of these diodes determines the output performance of the solar cell. The purpose of this work is to contribute to the investigation of the tunnel electrical resistance of such a multi-junction cell through the analysis of the current-voltage (J-V characteristics under illumination. Our approach is based on an equivalent circuit model of a diode for each subcell. We examine the effect of tunnel resistance on the performance of a multi-junction cell using minimization of the least squares technique.
Stochastic models of transcription: from single molecules to single cells.
Sanchez, Alvaro; Choubey, Sandeep; Kondev, Jane
2013-07-15
Genes in prokaryotic and eukaryotic cells are typically regulated by complex promoters containing multiple binding sites for a variety of transcription factors leading to a specific functional dependence between regulatory inputs and transcriptional outputs. With increasing regularity, the transcriptional outputs from different promoters are being measured in quantitative detail in single-cell experiments thus providing the impetus for the development of quantitative models of transcription. We describe recent progress in developing models of transcriptional regulation that incorporate, to different degrees, the complexity of multi-state promoter dynamics, and its effect on the transcriptional outputs of single cells. The goal of these models is to predict the statistical properties of transcriptional outputs and characterize their variability in time and across a population of cells, as a function of the input concentrations of transcription factors. The interplay between mathematical models of different regulatory mechanisms and quantitative biophysical experiments holds the promise of elucidating the molecular-scale mechanisms of transcriptional regulation in cells, from bacteria to higher eukaryotes. Copyright © 2013 Elsevier Inc. All rights reserved.
Phase memory across two single-photon interferometers including wavelength conversion
Heuer, A.; Raabe, S.; Menzel, R.
2014-10-01
Spontaneous parametric down-conversion (SPDC) in a nonlinear crystal generates two single photons (signal and idler) with random phases. Thus, no first-order interference between them occurs. However, coherence can be induced in a cascaded setup of two crystals if, e.g., the idler modes of both crystals are aligned to be indistinguishable. Due to the effect of phase memory it is found that the first-order interference of the signal beams can be controlled by the phase delay between the pump beams. Even for pump photon delays much larger than the coherence length of the SPDC photons, the visibility is above 90%. The high visibilities reported here prove an almost perfect phase memory effect across the two interferometers for the pump and the signal photon modes.
Modeling of the dynamics of wind to power conversion including high wind speed behavior
DEFF Research Database (Denmark)
Litong-Palima, Marisciel; Bjerge, Martin Huus; Cutululis, Nicolaos Antonio
2016-01-01
of power system studies, but the idea of the proposed wind turbine model is to include the main dynamic effects in order to have a better representation of the fluctuations in the output power and of the fast power ramping especially because of high wind speed shutdowns of the wind turbine. The high wind......This paper proposes and validates an efficient, generic and computationally simple dynamic model for the conversion of the wind speed at hub height into the electrical power by a wind turbine. This proposed wind turbine model was developed as a first step to simulate wind power time series...... for power system studies. This paper focuses on describing and validating the single wind turbine model, and is therefore neither describing wind speed modeling nor aggregation of contributions from a whole wind farm or a power system area. The state-of-the-art is to use static power curves for the purpose...
Bisimulation for Single-Agent Plausibility Models
DEFF Research Database (Denmark)
Andersen, Mikkel Birkegaard; Bolander, Thomas; van Ditmarsch, H.;
2013-01-01
Epistemic plausibility models are Kripke models agents use to reason about the knowledge and beliefs of themselves and each other. Restricting ourselves to the single-agent case, we determine when such models are indistinguishable in the logical language containing conditional belief, i.e., we...... define a proper notion of bisimulation, and prove that bisimulation corresponds to logical equivalence on image-finite models. We relate our results to other epistemic notions, such as safe belief and degrees of belief. Our results imply that there are only finitely many non-bisimilar single......-agent epistemic plausibility models on a finite set of propositions. This gives decidability for single-agent epistemic plausibility planning....
A Single Species Model with Impulsive Diffusion
Institute of Scientific and Technical Information of China (English)
Jing Hui; Lan-sun Chen
2005-01-01
In most models of population dynamics, diffusion between patches is assumed to be continuous or discrete, but in practice many species diffuse only during a single period. In this paper we propose a single species model with impulsive diffusion between two patches, which provides a more natural description of population dynamics. By using the discrete dynamical system generated by a monotone, concave map for the population,we prove that the map alwayshas a globally stable positive fixed point. This means that a single species system with impulsive diffusion always has a globally stable positive periodic solution. This result is further substantiated by numerical simulation. Under impulsive diffusion the single species survives in the two patches.
Rivas, Elena; Lang, Raymond; Eddy, Sean R
2012-02-01
The standard approach for single-sequence RNA secondary structure prediction uses a nearest-neighbor thermodynamic model with several thousand experimentally determined energy parameters. An attractive alternative is to use statistical approaches with parameters estimated from growing databases of structural RNAs. Good results have been reported for discriminative statistical methods using complex nearest-neighbor models, including CONTRAfold, Simfold, and ContextFold. Little work has been reported on generative probabilistic models (stochastic context-free grammars [SCFGs]) of comparable complexity, although probabilistic models are generally easier to train and to use. To explore a range of probabilistic models of increasing complexity, and to directly compare probabilistic, thermodynamic, and discriminative approaches, we created TORNADO, a computational tool that can parse a wide spectrum of RNA grammar architectures (including the standard nearest-neighbor model and more) using a generalized super-grammar that can be parameterized with probabilities, energies, or arbitrary scores. By using TORNADO, we find that probabilistic nearest-neighbor models perform comparably to (but not significantly better than) discriminative methods. We find that complex statistical models are prone to overfitting RNA structure and that evaluations should use structurally nonhomologous training and test data sets. Overfitting has affected at least one published method (ContextFold). The most important barrier to improving statistical approaches for RNA secondary structure prediction is the lack of diversity of well-curated single-sequence RNA secondary structures in current RNA databases.
Key Characteristics of Combined Accident including TLOFW accident for PSA Modeling
Energy Technology Data Exchange (ETDEWEB)
Kim, Bo Gyung; Kang, Hyun Gook [KAIST, Daejeon (Korea, Republic of); Yoon, Ho Joon [Khalifa University of Science, Technology and Research, Abu Dhabi (United Arab Emirates)
2015-05-15
The conventional PSA techniques cannot adequately evaluate all events. The conventional PSA models usually focus on single internal events such as DBAs, the external hazards such as fire, seismic. However, the Fukushima accident of Japan in 2011 reveals that very rare event is necessary to be considered in the PSA model to prevent the radioactive release to environment caused by poor treatment based on lack of the information, and to improve the emergency operation procedure. Especially, the results from PSA can be used to decision making for regulators. Moreover, designers can consider the weakness of plant safety based on the quantified results and understand accident sequence based on human actions and system availability. This study is for PSA modeling of combined accidents including total loss of feedwater (TLOFW) accident. The TLOFW accident is a representative accident involving the failure of cooling through secondary side. If the amount of heat transfer is not enough due to the failure of secondary side, the heat will be accumulated to the primary side by continuous core decay heat. Transients with loss of feedwater include total loss of feedwater accident, loss of condenser vacuum accident, and closure of all MSIVs. When residual heat removal by the secondary side is terminated, the safety injection into the RCS with direct primary depressurization would provide alternative heat removal. This operation is called feed and bleed (F and B) operation. Combined accidents including TLOFW accident are very rare event and partially considered in conventional PSA model. Since the necessity of F and B operation is related to plant conditions, the PSA modeling for combined accidents including TLOFW accident is necessary to identify the design and operational vulnerabilities.The PSA is significant to assess the risk of NPPs, and to identify the design and operational vulnerabilities. Even though the combined accident is very rare event, the consequence of combined
Mechanical model of a single tendon finger
Rossi, Cesare; Savino, Sergio
2013-10-01
The mechanical model of a single tendon three phalanxes finger is presented. By means of the model both kinematic and dynamical behavior of the finger itself can be studied. This finger is a part of a more complex mechanical system that consists in a four finger grasping device for robots or in a five finger human hand prosthesis. A first prototype has been realized in our department in order to verify the real behavior of the model. Some results of both kinematic and dynamical behavior are presented.
THE BERTRAND MODEL OF THE SINGLE MARKET
Directory of Open Access Journals (Sweden)
Vadasan Ioana
2010-12-01
Full Text Available Starting with the signification of the rationality hypothesis when the agent’s contentment is directly affected by the other agents’ decisions, the theory of games defines solutions for solving different situations of conflict. The economic actors have different behaviours of the Single Market. Oligopoly strategic behaviours were analysed by the Bertrand model. The two types revealed in the work show that strategic interactions are sensitive to the companies’ features, products and markets. Regarding the situation when we have an oligopoly competition, the companies make interdependent decisions in the environment affected by risk and uncertainty of the Single Market. For this reason it is an opportunity to study the structure of oligopoly type of of the Single Market with the aid of non – cooperative games.
Integrating the augmented SCOR model and the ISO 15288 life cycle model into a single logistic model
CSIR Research Space (South Africa)
Schmitz, Peter MU
2010-07-01
Full Text Available using the Supply Chain Operations Reference (SCOR) model. The SANDF indicated that the augmented SCOR model (Bean, Schmitz and Engelbrecht, 2009) should be extended into a single logistics process which should include a life-cycle perspective...
Directory of Open Access Journals (Sweden)
Jelena Jovanović
2010-03-01
Full Text Available The research is oriented on improvement of environmental management system (EMS using BSC (Balanced Scorecard model that presents strategic model of measurem ents and improvement of organisational performance. The research will present approach of objectives and environmental management me trics involvement (proposed by literature review in conventional BSC in "Ad Barska plovi dba" organisation. Further we will test creation of ECO-BSC model based on business activities of non-profit organisations in order to improve envir onmental management system in parallel with other systems of management. Using this approach we may obtain 4 models of BSC that includ es elements of environmen tal management system for AD "Barska plovidba". Taking into acc ount that implementation and evaluation need long period of time in AD "Barska plovidba", the final choice will be based on 14598 (Information technology - Software product evaluation and ISO 9126 (Software engineering - Product quality using AHP method. Those standards are usually used for evaluation of quality software product and computer programs that serve in organisation as support and factors for development. So, AHP model will be bas ed on evolution criteria based on suggestion of ISO 9126 standards and types of evaluation from two evaluation teams. Members of team & will be experts in BSC and environmental management system that are not em ployed in AD "Barska Plovidba" organisation. The members of team 2 will be managers of AD "Barska Plovidba" organisation (including manage rs from environmental department. Merging results based on previously cr eated two AHP models, one can obtain the most appropriate BSC that includes elements of environmental management system. The chosen model will present at the same time suggestion for approach choice including ecological metrics in conventional BSC model for firm that has at least one ECO strategic orientation.
Modeling Tropical Precipitation in a Single Column.
Sobel, Adam H.; Bretherton, Christopher S.
2000-12-01
A modified formulation of the traditional single column model for representing a limited area near the equator is proposed. This formulation can also be considered a two-column model in the limit as the area represented by one of the columns becomes very large compared to the other. Only a single column is explicitly modeled, but its free tropospheric temperature, rather than its mean vertical velocity, is prescribed. This allows the precipitation and vertical velocity to be true prognostic variables, as in prior analytical theories of tropical precipitation. Two models developed by other authors are modified according to the proposed formulation. The first is the intermediate atmospheric model of J. D. Neelin and N. Zeng, but with the horizontal connections between columns broken, rendering it a set of disconnected column models. The second is the column model of N. O. Rennó, K. A. Emanuel, and P. H. Stone. In the first model, the set of disconnected column models is run with a fixed temperature that is uniform in the Tropics, and insolation, SST, and surface wind speed taken from a control run of the original model. The column models produce a climatological precipitation field that is grossly similar to that of the control run, despite that the circulation implied by the column models is not required to conserve mass. The addition of horizontal moisture advection by the wind from the control run substantially improves the simulation in dry regions. In the second model the sensitivity of the modeled steady-state precipitation and relative humidity to varying SST and wind speed is examined. The transition from shallow to deep convection is simulated in a `Lagrangian' calculation in which the column model is subjected to an SST that increases in time. In this simulation, the onset of deep convection is delayed to a higher SST than in the steady-state case, due to the effect of horizontal moisture advection (viewed in a Lagrangian reference frame). In both of the
Single crystal plasticity by modeling dislocation density rate behavior
Energy Technology Data Exchange (ETDEWEB)
Hansen, Benjamin L [Los Alamos National Laboratory; Bronkhorst, Curt [Los Alamos National Laboratory; Beyerlein, Irene [Los Alamos National Laboratory; Cerreta, E. K. [Los Alamos National Laboratory; Dennis-Koller, Darcie [Los Alamos National Laboratory
2010-12-23
The goal of this work is to formulate a constitutive model for the deformation of metals over a wide range of strain rates. Damage and failure of materials frequently occurs at a variety of deformation rates within the same sample. The present state of the art in single crystal constitutive models relies on thermally-activated models which are believed to become less reliable for problems exceeding strain rates of 10{sup 4} s{sup -1}. This talk presents work in which we extend the applicability of the single crystal model to the strain rate region where dislocation drag is believed to dominate. The elastic model includes effects from volumetric change and pressure sensitive moduli. The plastic model transitions from the low-rate thermally-activated regime to the high-rate drag dominated regime. The direct use of dislocation density as a state parameter gives a measurable physical mechanism to strain hardening. Dislocation densities are separated according to type and given a systematic set of interactions rates adaptable by type. The form of the constitutive model is motivated by previously published dislocation dynamics work which articulated important behaviors unique to high-rate response in fcc systems. The proposed material model incorporates thermal coupling. The hardening model tracks the varying dislocation population with respect to each slip plane and computes the slip resistance based on those values. Comparisons can be made between the responses of single crystals and polycrystals at a variety of strain rates. The material model is fit to copper.
An analytical model for porous single crystals with ellipsoidal voids
Mbiakop, A.; Constantinescu, A.; Danas, K.
2015-11-01
A rate-(in)dependent constitutive model for porous single crystals with arbitrary crystal anisotropy (e.g., FCC, BCC, HCP, etc.) containing general ellipsoidal voids is developed. The proposed model, denoted as modified variational model (MVAR), is based on the nonlinear variational homogenization method, which makes use of a linear comparison porous material to estimate the response of the nonlinear porous single crystal. Periodic multi-void finite element simulations are used in order to validate the MVAR for a large number of parameters including cubic (FCC, BCC) and hexagonal (HCP) crystal anisotropy, various creep exponents (i.e., nonlinearity), several stress triaxiality ratios, general void shapes and orientations and various porosity levels. The MVAR model, which involves a priori no calibration parameters, is found to be in good agreement with the finite element results for all cases considered in the rate-dependent context. The model is then used in a predictive manner to investigate the complex response of porous single crystals in several cases with strong coupling between the anisotropy of the crystal and the (morphological) anisotropy induced by the shape and orientation of the voids. Finally, a simple way of calibrating the MVAR with just two adjustable parameters is depicted in the rate-independent context so that an excellent agreement with the FE simulation results is obtained. In this last case, this proposed model can be thought as a generalization of the Gurson model in the context of porous single crystals and general ellipsoidal void shapes and orientations.
2012-09-01
ATMOSPHERIC MODELS INCLUDING ENSEMBLE METHODS Scott E. Miller Lieutenant Commander, United States Navy B.S., University of South Carolina, 2000 B.S...Typical gas turbine fuel consumption curve and relationship to sea state .......51 Figure 16. DDG 58 speed reduction curves for bow seas...Day Time Group ECDIS-N Electronic Chart Display and Information System – Navy ECMWF European Center for Medium Range Weather Forecasts EFAS
Poisson-Fermi Model of Single Ion Activities
Liu, Jinn-Liang
2015-01-01
A Poisson-Fermi model is proposed for calculating activity coefficients of single ions in strong electrolyte solutions based on the experimental Born radii and hydration shells of ions in aqueous solutions. The steric effect of water molecules and interstitial voids in the first and second hydration shells play an important role in our model. The screening and polarization effects of water are also included in the model that can thus describe spatial variations of dielectric permittivity, water density, void volume, and ionic concentration. The activity coefficients obtained by the Poisson-Fermi model with only one adjustable parameter are shown to agree with experimental data, which vary nonmonotonically with salt concentrations.
Sillanpää, Mikko J; Hoti, Fabian
2007-12-01
A new effective Bayesian quantitative trait locus (QTL) mapping approach for the analysis of single-tail selected samples of the phenotype distribution is presented. The approach extends the affected-only tests to single-tail sampling with quantitative traits such as the log-normal survival time or censored/selected traits. A great benefit of the approach is that it enables the utilization of multiple-QTL models, is easy to incorporate into different data designs (experimental and outbred populations), and can potentially be extended to epistatic models. In inbred lines, the method exploits the fact that the parental mating type and the linkage phases (haplotypes) are known by definition. In outbred populations, two-generation data are needed, for example, selected offspring and one of the parents (the sires) in breeding material. The idea is to statistically (computationally) generate a fully complementary, maximally dissimilar, observation for each offspring in the sample. Bayesian data augmentation is then used to sample the space of possible trait values for the pseudoobservations. The benefits of the approach are illustrated using simulated data sets and a real data set on the survival of F(2) mice following infection with Listeria monocytogenes.
Ho, Wen-Tsung; Hsiao, Yu-Cheng
2012-04-01
This study investigated the integrated stochastic inventory problem for a two-stage supply chain consisting of a single retailer and a single supplier. By using batch shipment policy, the expected total cost can be significantly reduced. An equally sized batch shipment model, controlled by both the reorder and shipping points, with sharing information by enterprise resource planning and radio frequency identification is constructed. The problem is solved optimally by the proposed algorithm that determines the economic lot size, the optimal batch sizes and number of batches. A numerical example is included to illustrate the algorithmic procedures and to prove that the model controlled both by the reorder and shipping points is superior to the classic model controlled only by the reorder point.
Benjamin, Stan; Sun, Shan; Grell, Georg; Green, Benjamin; Bleck, Rainer; Li, Haiqin
2017-04-01
Extreme events for subseasonal duration have been linked to multi-week processes related to onset, duration, and cessation of blocking events or, more generally, quasi-stationary waves. Results will be shown from different sets of 32-day prediction experiments (3200 runs each) over a 16-year period for earth system processes key for subseasonal prediction for different resolution, numerics, and physics using the FIM-HYCOM coupled model. The coupled atmosphere (FIM) and ocean (HYCOM) modeling system is a relatively new coupled atmosphere-ocean model developed for subseasonal to seasonal prediction (Green et al. 2017 Mon.Wea.Rev. accepted, Bleck et al 2015 Mon. Wea. Rev.). Both component models operate on a common icosahedral horizontal grid and use an adaptive hybrid vertical coordinate (sigma-isentropic in FIM and sigma-isopycnic in HYCOM). FIM-HYCOM has been used to conduct 16 years of subseasonal retrospective forecasts following the NOAA Subseasonal (SubX) NMME protocol (32-day forward integrations), run with 4 ensemble members per week. Results from this multi-year FIM-HYCOM hindcast include successful forecasts out to 14-20 days for stratospheric warming events (from archived 10 hPa fields), improved MJO predictability (Green et al. 2017) using the Grell-Freitas (2014, ACP) scale-aware cumulus scheme instead of the Simplified Arakawa-Schubert scheme, and little sensitivity to resolution for blocking frequency. Forecast skill of metrics from FIM-HYCOM including 500 hPa heights and MJO index is at least comparable to that of the operational Climate Forecast System (CFSv2) used by the National Centers for Environmental Prediction. Subseasonal skill is improved with a limited multi-model (FIM-HYCOM and CFSv2), consistent with previous seasonal multi-model ensemble results. Ongoing work will also be reported on for adding inline aerosol/chemistry treatment to the coupled FIM-HYCOM model and for advanced approaches to subgrid-scale clouds to address regional biases
Modeling the Activity of Single Genes
Mjolsness, Eric; Gibson, Michael
1999-01-01
the key questions in gene regulation are: What genes are expressed in a certain cell at a certain time? How does gene expression differ from cell to cell in a multicellular organism? Which proteins act as transcription factors, i.e., are important in regulating gene expression? From questions like these, we hope to understand which genes are important for various macroscopic processes. Nearly all of the cells of a multicellular organism contain the same DNA. Yet this same genetic information yields a large number of different cell types. The fundamental difference between a neuron and a liver cell, for example, is which genes are expressed. Thus understanding gene regulation is an important step in understanding development. Furthermore, understanding the usual genes that are expressed in cells may give important clues about various diseases. Some diseases, such as sickle cell anemia and cystic fibrosis, are caused by defects in single, non-regulatory genes; others, such as certain cancers, are caused when the cellular control circuitry malfunctions - an understanding of these diseases will involve pathways of multiple interacting gene products. There are numerous challenges in the area of understanding and modeling gene regulation. First and foremost, biologists would like to develop a deeper understanding of the processes involved, including which genes and families of genes are important, how they interact, etc. From a computation point of view, there has been embarrassingly little work done. In this chapter there are many areas in which we can phrase meaningful, non-trivial computational questions, but questions that have not been addressed. Some of these are purely computational (what is a good algorithm for dealing with a model of type X) and others are more mathematical (given a system with certain characteristics, what sort of model can one use? How does one find biochemical parameters from system-level behavior using as few experiments as possible?). In
Mohammad, S. Noor
2010-09-01
Semiconductor nanotubes, including carbon nanotubes, have vast potential for new technology development. The fundamental physics and growth kinetics of these nanotubes are still obscured. Various models developed to elucidate the growth suffer from limited applicability. An in-depth investigation of the fundamentals of nanotube growth has, therefore, been carried out. For this investigation, various features of nanotube growth, and the role of the foreign element catalytic agent (FECA) in this growth, have been considered. Observed growth anomalies have been analyzed. Based on this analysis, a new shell model and a general hypothesis have been proposed for the growth. The essential element of the shell model is the seed generated from segregation during growth. The seed structure has been defined, and the formation of droplet from this seed has been described. A modified definition of the droplet exhibiting adhesive properties has also been presented. Various characteristics of the droplet, required for alignment and organization of atoms into tubular forms, have been discussed. Employing the shell model, plausible scenarios for the formation of carbon nanotubes, and the variation in the characteristics of these carbon nanotubes have been articulated. The experimental evidences, for example, for the formation of shell around a core, dipole characteristics of the seed, and the existence of nanopores in the seed, have been presented. They appear to justify the validity of the proposed model. The diversities of nanotube characteristics, fundamentals underlying the creation of bamboo-shaped carbon nanotubes, and the impurity generation on the surface of carbon nanotubes have been elucidated. The catalytic action of FECA on growth has been quantified. The applicability of the proposed model to the nanotube growth by a variety of mechanisms has been elaborated. These mechanisms include the vapor-liquid-solid mechanism, the oxide-assisted growth mechanism, the self
Assessment of Solution Uncertainties in Single-Column Modeling Frameworks.
Hack, James J.; Pedretti, John A.
2000-01-01
Single-column models (SCMs) have been extensively promoted in recent years as an effective means to develop and test physical parameterizations targeted for more complex three-dimensional climate models. Although there are some clear advantages associated with single-column modeling, there are also some significant disadvantages, including the absence of large-scale feedbacks. Basic limitations of an SCM framework can make it difficult to interpret solutions, and at times contribute to rather striking failures to identify even first-order sensitivities as they would be observed in a global climate simulation. This manuscript will focus on one of the basic experimental approaches currently exploited by the single-column modeling community, with an emphasis on establishing the inherent uncertainties in the numerical solutions. The analysis will employ the standard physics package from the NCAR CCM3 and will illustrate the nature of solution uncertainties that arise from nonlinearities in parameterized physics. The results of this study suggest the need to make use of an ensemble methodology when conducting single-column modeling investigations.
A Model for One-Dimensional Coherent Synchrotron Radiation including Short-Range Effects
Ryne, Robert D; Qiang, Ji; Yampolsky, Nikolai
2012-01-01
A new model is presented for simulating coherent synchrotron radiation (CSR) in one dimension. The method is based on convolving an integrated Green function (IGF) with the longitudinal charge density. Since it is based on an IGF, the accuracy of this approach is determined by how well one resolves the charge density and not by resolving the single particle wake function. Since short-range wakefield effects are included analytically, the approach can be much more efficient than ordinary (non-IGF) approaches in situations where the wake function and charge density have disparate spatial scales. Two cases are presented: one derived from the full wake including short-range effects, and one derived from the asymptotic wake. In the latter case the algorithm contains the same physics as others based on the asymptotic approximation, but requires only the line charge density and not its derivative. Examples are presented that illustrate the limitations of the asymptotic-wake approximation, and that illustrate how mic...
Directory of Open Access Journals (Sweden)
M. Grujicic
2013-01-01
Full Text Available The mechanical response of p-phenylene terephthalamide (PPTA single fibers when subjected to uniaxial compression is investigated computationally using coarse-grained molecular statics/dynamics methods. In order to construct the coarse-grained PPTA model (specifically, in order to define the nature of the coarse-grained particles/beads and to parameterize various components of the bead/bead force-field functions, the results of an all-atom molecular-level computational investigation are used. In addition, the microstructure/topology of the fiber core, consisting of a number of coaxial crystalline fibrils, is taken into account. Also, following our prior work, various PPTA crystallographic/topological defects are introduced into the model (at concentrations consistent with the prototypical PPTA synthesis/processing conditions. The analysis carried out clearly revealed (a formation of the kink bands during axial compression; (b the role of defects in promoting the formation of kink bands; (c the stimulating effects of some defects on the fiber-fibrillation process; and (d the detrimental effect of the prior compression, associated with fiber fibrillation, on the residual longitudinal-tensile strength of the PPTA fibers.
Behrens, Angelika; Stolte, Manfred; Pech, Oliver; May, Andrea; Ell, Christian
2014-01-01
Background Verrucous carcinomas (VC) of the oesophagus are a rarity. Due to their histological resemblance to squamous cell carcinoma, the diagnostic and treatment standards applicable to the latter have so far also been applied to VC as a disease entity. Quite limited data are available including two case series of 5 or 11 patients. The present study reports on a single case treated by local endoscopic therapy and a series of 15 patients, 9 of whom received local endoscopic therapy. Methods The data for patients diagnosed with VC of the oesophagus who had been treated from January 1999 to May 2011 were analysed retrospectively. Results 15 patients with the diagnosis of oesophageal VC were included. The male-female ratio was 3:1. 9 of 11 pT1-VC patients presented with the cardinal symptom dysphagia or odynophagia. For the majority of the patients, the growth pattern is one of extensive superficial expansion showing a median length of 9 cm (range: 2-22 cm). Surprisingly, none of the VC patients showed lymph node or distant metastasis. 9 of 15 VC patients received local endoscopic therapy; 4 were treated with curative intent and 5 were treated palliatively. 3 patients underwent oesophageal resection, and definitive chemoradiotherapy was administered in a further 3 patients. One severe complication, consisting of a postoperative anastomotic insufficiency with a fatal outcome, occurred in this group of patients. Conclusion This is the largest published study describing patients diagnosed with VC of the oesophagus so far. The option of local endoscopic therapy and its results in 9 patients are reported for the first time. The superficial growth pattern of the tumour and the frequent absence of lymph node or distant metastasis suggest that endoscopic resection can be carried out as a diagnostic and/or therapeutic approach. Due to the rarity of this entity, the case numbers are unfortunately so limited that evidence-based recommendations are unlikely to become available
An analytical model for pyrolysis of a single biomass particle
Institute of Scientific and Technical Information of China (English)
Mehdi Bidabadi; Mohammad Rastegar Moghaddam; Seyed Alireza Mostafavi; Farzad Faraji Dizaji; Hossein Beidaghy Dizaji
2015-01-01
Decreasing in emissions of greenhouse gases to confront the global warming needs to replace fossil fuels as the main doer of the world climate changes by renewable and clean fuels produced from biomass like wood waste which is neutral on the amount of CO2. An analytical and engineering model for pyrolysis process of a single biomass particle has been presented. Using a two-stage semi global kinetic model which includes both primary and secondary reactions, the effects of parameters like shape and size of particle as well as porosity on the particle temperature profile and product yields have been investigated. Comparison of the obtained results with experimental data shows that our results are in a reasonable agreement with previous researchers’ works. Finally, a sensitivity analysis is done to determine the importance of each parameter on pyrolysis of a single biomass particle which is affected by many constant parameters.
Energy Technology Data Exchange (ETDEWEB)
Bergami, L.; Gaunaa, M.
2012-02-15
The report presents the ATEFlap aerodynamic model, which computes the unsteady lift, drag and moment on a 2D airfoil section equipped with Adaptive Trailing Edge Flap. The model captures the unsteady response related to the effects of the vorticity shed into the wake, and the dynamics of flow separation a thin-airfoil potential flow model is merged with a dynamic stall model of the Beddoes-Leishmann type. The inputs required by the model are steady data for lift, drag, and moment coefficients as function of angle of attack and flap deflection. Further steady data used by the Beddoes- Leishmann dynamic stall model are computed in an external preprocessor application, which gives the user the possibility to verify, and eventually correct, the steady data passed to the aerodynamic model. The ATEFlap aerodynamic model is integrated in the aeroelastic simulation tool HAWC2, thus al- lowing to simulate the response of a wind turbine with trailing edge flaps on the rotor. The algorithms used by the preprocessor, and by aerodynamic model are presented, and modifications to previous implementations of the aerodynamic model are briefly discussed. The performance and the validity of the model are verified by comparing the dynamic response computed by the ATEFlap with solutions from CFD simulations. (Author)
Regional Ionospheric Modelling for Single-Frequency Users
Boisits, Janina; Joldzic, Nina; Weber, Robert
2016-04-01
Ionospheric signal delays are a main error source in GNSS-based positioning. Thus, single-frequency receivers, which are frequently used nowadays, require additional ionospheric information to mitigate these effects. Within the Austrian Research Promotion Agency (FFG) project Regiomontan (Regional Ionospheric Modelling for Single-Frequency Users) a new and as realistic as possible model is used to obtain precise GNSS ionospheric signal delays. These delays will be provided to single-frequency users to significantly increase positioning accuracy. The computational basis is the Thin-Shell Model. For regional modelling a thin electron layer of the underlying model is approximated by a Taylor series up to degree two. The network used includes 22 GNSS Reference Stations in Austria and nearby. First results were calculated from smoothed code observations by forming the geometry-free linear combination. Satellite and station DCBs were applied. In a least squares adjustment the model parameters, consisting of the VTEC0 at the origin of the investigated area, as well as the first and the second derivatives of the electron content in longitude and latitude, were obtained with a temporal resolution of 1 hour. The height of the layer was kept fixed. The formal errors of the model parameters suggest an accuracy of the VTEC slightly better than 1TECU for a user location within Austria. In a further step, the model parameters were derived from sole phase observations by using a levelling approach to mitigate common range biases. The formal errors of this model approach suggest an accuracy of about a few tenths of a TECU. For validation, the Regiomontan VTEC was compared to IGS TEC maps depicting a very good agreement. Further, a comparison of pseudoranges has been performed to calculate the 'true' error by forming the ionosphere-free linear combination on the one hand, and by applying the Regiomontan model to L1 pseudoranges on the other hand. The resulting differences are mostly
Importance of global aerosol modeling including secondary organic aerosol formed from monoterpene
Goto, Daisuke; Takemura, Toshihiko; Nakajima, Teruyuki
2008-01-01
A global three-dimensional aerosol transport-radiation model, coupled to an atmospheric general circulation model (AGCM), has been extended to improve the model process for organic aerosols, particularly secondary organic aerosols (SOA), and to estimate SOA contributions to direct and indirect radiative effects. Because the SOA formation process is complicated and unknown, the results in different model simulations include large differences. In this work, we simulate SOA production assuming v...
MODEL ANALYSIS AND PARAMETER EXTRACTION FOR MOS CAPACITOR INCLUDING QUANTUM MECHANICAL EFFECTS
Institute of Scientific and Technical Information of China (English)
Hai-yan Jiang; Ping-wen Zhang
2006-01-01
The high frequency CV curves of MOS capacitor have been studied. It is shown that semiclassical model is a good approximation to quantum model and approaches to classical model when the oxide layer is thick. This conclusion provides us an efficient (semiclassical) model including quantum mechanical effects to do parameter extraction for ultrathi noxide device. Here the effective extracting strategy is designed and numerical experiments demonstrate the validity of the strategy.
A finite element model of the face including an orthotropic skin model under in vivo tension.
Flynn, Cormac; Stavness, Ian; Lloyd, John; Fels, Sidney
2015-01-01
Computer models of the human face have the potential to be used as powerful tools in surgery simulation and animation development applications. While existing models accurately represent various anatomical features of the face, the representation of the skin and soft tissues is very simplified. A computer model of the face is proposed in which the skin is represented by an orthotropic hyperelastic constitutive model. The in vivo tension inherent in skin is also represented in the model. The model was tested by simulating several facial expressions by activating appropriate orofacial and jaw muscles. Previous experiments calculated the change in orientation of the long axis of elliptical wounds on patients' faces for wide opening of the mouth and an open-mouth smile (both 30(o)). These results were compared with the average change of maximum principal stress direction in the skin calculated in the face model for wide opening of the mouth (18(o)) and an open-mouth smile (25(o)). The displacements of landmarks on the face for four facial expressions were compared with experimental measurements in the literature. The corner of the mouth in the model experienced the largest displacement for each facial expression (∼11-14 mm). The simulated landmark displacements were within a standard deviation of the measured displacements. Increasing the skin stiffness and skin tension generally resulted in a reduction in landmark displacements upon facial expression.
Climate change impact modelling needs to include cross-sectoral interactions
Harrison, Paula A.; Dunford, Robert W.; Holman, Ian P.; Rounsevell, Mark D. A.
2016-09-01
Climate change impact assessments often apply models of individual sectors such as agriculture, forestry and water use without considering interactions between these sectors. This is likely to lead to misrepresentation of impacts, and consequently to poor decisions about climate adaptation. However, no published research assesses the differences between impacts simulated by single-sector and integrated models. Here we compare 14 indicators derived from a set of impact models run within single-sector and integrated frameworks across a range of climate and socio-economic scenarios in Europe. We show that single-sector studies misrepresent the spatial pattern, direction and magnitude of most impacts because they omit the complex interdependencies within human and environmental systems. The discrepancies are particularly pronounced for indicators such as food production and water exploitation, which are highly influenced by other sectors through changes in demand, land suitability and resource competition. Furthermore, the discrepancies are greater under different socio-economic scenarios than different climate scenarios, and at the sub-regional rather than Europe-wide scale.
Hot DA white dwarf model atmosphere calculations: Including improved Ni PI cross sections
Preval, S P; Badnell, N R; Hubeny, I; Holberg, J B
2016-01-01
To calculate realistic models of objects with Ni in their atmospheres, accurate atomic data for the relevant ionization stages needs to be included in model atmosphere calculations. In the context of white dwarf stars, we investigate the effect of changing the Ni {\\sc iv}-{\\sc vi} bound-bound and bound-free atomic data has on model atmosphere calculations. Models including PICS calculated with {\\sc autostructure} show significant flux attenuation of up to $\\sim 80$\\% shortward of 180\\AA\\, in the EUV region compared to a model using hydrogenic PICS. Comparatively, models including a larger set of Ni transitions left the EUV, UV, and optical continua unaffected. We use models calculated with permutations of this atomic data to test for potential changes to measured metal abundances of the hot DA white dwarf G191-B2B. Models including {\\sc autostructure} PICS were found to change the abundances of N and O by as much as $\\sim 22$\\% compared to models using hydrogenic PICS, but heavier species were relatively unaf...
Mathematical Model of Thyristor Inverter Including a Series-parallel Resonant Circuit
Directory of Open Access Journals (Sweden)
Miroslaw Luft
2008-01-01
Full Text Available The article presents a mathematical model of thyristor inverter including a series-parallel resonant circuit with theaid of state variable method. Maple procedures are used to compute current and voltage waveforms in the inverter.
Non-line-of-sight polarized single-scatter propagation model for noncoplanar geometries
Yin, Hongwei; Jia, Honghui; Luo, Jianfeng; Chang, Shengli; Yang, Juncai
2012-01-01
The classical model of non-line-of-sight (NLOS) single-scatter propagation for coplanar geometries was recently extended to include noncoplanar geometries; the calculation processes in the extended model are partly based on the Cartesian coordinate system and are somewhat complicated. A new NLOS single-scatter propagation model for noncoplanar geometries is presented based only on the prolate spheroidal coordinate system, which can be considered as the simplified version of the extended model mentioned above. Similar to the polarization-extension of the Monte-Carlo-based multiple-scatter model, the new single-scatter model for noncoplanar geometries is also extended to take polarization into account; the polarized single-scatter model is validated by the Monte-Carlo-based polarized model, results show perfect match. The theoretical feasibility of a 2-polarization UV communication link is validated based on the polarized single-scatter model.
A Verilog-A large signal model for InP DHBT including thermal effects
Yuxia, Shi; Zhi, Jin; Zhijian, Pan; Yongbo, Su; Yuxiong, Cao; Yan, Wang
2013-06-01
A large signal model for InP/InGaAs double heterojunction bipolar transistors including thermal effects has been reported, which demonstrated good agreements of simulations with measurements. On the basis of the previous model in which the double heterojunction effect, current blocking effect and high current effect in current expression are considered, the effect of bandgap narrowing with temperature has been considered in transport current while a formula for model parameters as a function of temperature has been developed. This model is implemented by Verilog-A and embedded in ADS. The proposed model is verified with DC and large signal measurements.
Directory of Open Access Journals (Sweden)
Yong Zhao
1997-01-01
Full Text Available A nonlinear three dimensional (3D single rack model and a nonlinear 3D whole pool multi-rack model are developed for the spent fuel storage racks of a nuclear power plant (NPP to determine impacts and frictional motion responses when subjected to 3D excitations from the supporting building floor. The submerged free standing rack system and surrounding water are coupled due to hydrodynamic fluid-structure interaction (FSI using potential theory. The models developed have features that allow consideration of geometric and material nonlinearities including (1 the impacts of fuel assemblies to rack cells, a rack to adjacent racks or pool walls, and rack support legs to the pool floor; (2 the hydrodynamic coupling of fuel assemblies with their storing racks, and of a rack with adjacent racks, pool walls, and the pool floor; and (3 the dynamic motion behavior of rocking, twisting, and frictional sliding of rack modules. Using these models 3D nonlinear time history dynamic analyses are performed per the U.S. Nuclear Regulatory Commission (USNRC criteria. Since few such modeling, analyses, and results using both the 3D single and whole pool multiple rack models are available in the literature, this paper emphasizes description of modeling and analysis techniques using the SOLVIA general purpose nonlinear finite element code. Typical response results with different Coulomb friction coefficients are presented and discussed.
Modelling Mediterranean agro-ecosystems by including agricultural trees in the LPJmL model
Fader, M.; von Bloh, W.; Shi, S.; Bondeau, A.; Cramer, W.
2015-11-01
In the Mediterranean region, climate and land use change are expected to impact on natural and agricultural ecosystems by warming, reduced rainfall, direct degradation of ecosystems and biodiversity loss. Human population growth and socioeconomic changes, notably on the eastern and southern shores, will require increases in food production and put additional pressure on agro-ecosystems and water resources. Coping with these challenges requires informed decisions that, in turn, require assessments by means of a comprehensive agro-ecosystem and hydrological model. This study presents the inclusion of 10 Mediterranean agricultural plants, mainly perennial crops, in an agro-ecosystem model (Lund-Potsdam-Jena managed Land - LPJmL): nut trees, date palms, citrus trees, orchards, olive trees, grapes, cotton, potatoes, vegetables and fodder grasses. The model was successfully tested in three model outputs: agricultural yields, irrigation requirements and soil carbon density. With the development presented in this study, LPJmL is now able to simulate in good detail and mechanistically the functioning of Mediterranean agriculture with a comprehensive representation of ecophysiological processes for all vegetation types (natural and agricultural) and in a consistent framework that produces estimates of carbon, agricultural and hydrological variables for the entire Mediterranean basin. This development paves the way for further model extensions aiming at the representation of alternative agro-ecosystems (e.g. agroforestry), and opens the door for a large number of applications in the Mediterranean region, for example assessments of the consequences of land use transitions, the influence of management practices and climate change impacts.
Modelling Mediterranean agro-ecosystems by including agricultural trees in the LPJmL model
Directory of Open Access Journals (Sweden)
M. Fader
2015-06-01
Full Text Available Climate and land use change in the Mediterranean region is expected to affect natural and agricultural ecosystems by decreases in precipitation, increases in temperature as well as biodiversity loss and anthropogenic degradation of natural resources. Demographic growth in the Eastern and Southern shores will require increases in food production and put additional pressure on agro-ecosystems and water resources. Coping with these challenges requires informed decisions that, in turn, require assessments by means of a comprehensive agro-ecosystem and hydrological model. This study presents the inclusion of 10 Mediterranean agricultural plants, mainly perennial crops, in an agro-ecosystem model (LPJmL: nut trees, date palms, citrus trees, orchards, olive trees, grapes, cotton, potatoes, vegetables and fodder grasses. The model was successfully tested in three model outputs: agricultural yields, irrigation requirements and soil carbon density. With the development presented in this study, LPJmL is now able to simulate in good detail and mechanistically the functioning of Mediterranean agriculture with a comprehensive representation of ecophysiological processes for all vegetation types (natural and agricultural and in a consistent framework that produces estimates of carbon, agricultural and hydrological variables for the entire Mediterranean basin. This development pave the way for further model extensions aiming at the representation of alternative agro-ecosystems (e.g. agroforestry, and opens the door for a large number of applications in the Mediterranean region, for example assessments on the consequences of land use transitions, the influence of management practices and climate change impacts.
Replica Analysis for Portfolio Optimization with Single-Factor Model
Shinzato, Takashi
2017-06-01
In this paper, we use replica analysis to investigate the influence of correlation among the return rates of assets on the solution of the portfolio optimization problem. We consider the behavior of an optimal solution for the case where the return rate is described with a single-factor model and compare the findings obtained from our proposed methods with correlated return rates with those obtained with independent return rates. We then analytically assess the increase in the investment risk when correlation is included. Furthermore, we also compare our approach with analytical procedures for minimizing the investment risk from operations research.
Numerical Acoustic Models Including Viscous and Thermal losses: Review of Existing and New Methods
DEFF Research Database (Denmark)
Andersen, Peter Risby; Cutanda Henriquez, Vicente; Aage, Niels
2017-01-01
This work presents an updated overview of numerical methods including acoustic viscous and thermal losses. Numerical modelling of viscothermal losses has gradually become more important due to the general trend of making acoustic devices smaller. Not including viscothermal acoustic losses in such...
Zhang, Huiyan; Wang, Yun; Shao, Shanshan; Xiao, Rui
2016-11-01
Lignin is the most difficult to be converted and most easy coking component in biomass catalytic pyrolysis to high-value liquid fuels and chemicals. Catalytic conversion of guaiacol as a lignin model compound was conducted in a fixed-bed reactor over ZSM-5 to investigate its conversion and coking behaviors. The effects of temperature, weight hourly space velocity (WHSV) and partial pressure on product distribution were studied. The results show the maximum aromatic carbon yield of 28.55% was obtained at temperature of 650 °C, WHSV of 8 h‑1 and partial pressure of 2.38 kPa, while the coke carbon yield was 19.55%. The reaction pathway was speculated to be removing methoxy group to form phenols with further aromatization to form aromatics. The amount of coke increased with increasing reaction time. The surface area and acidity of catalysts declined as coke formed on the acid sites and blocked the pore channels, which led to the decrease of aromatic yields. Finally, a kinetic model of guaiacol catalytic conversion considering coke deposition was built based on the above reaction pathway to properly predict product distribution. The experimental and model predicting data agreed well. The correlation coefficient of all equations were all higher than 0.90.
Including operational data in QMRA model: development and impact of model inputs.
Jaidi, Kenza; Barbeau, Benoit; Carrière, Annie; Desjardins, Raymond; Prévost, Michèle
2009-03-01
A Monte Carlo model, based on the Quantitative Microbial Risk Analysis approach (QMRA), has been developed to assess the relative risks of infection associated with the presence of Cryptosporidium and Giardia in drinking water. The impact of various approaches for modelling the initial parameters of the model on the final risk assessments is evaluated. The Monte Carlo simulations that we performed showed that the occurrence of parasites in raw water was best described by a mixed distribution: log-Normal for concentrations > detection limit (DL), and a uniform distribution for concentrations risks significantly. The mean annual risks for conventional treatment are: 1.97E-03 (removal credit adjusted by log parasite = log spores), 1.58E-05 (log parasite = 1.7 x log spores) or 9.33E-03 (regulatory credits based on the turbidity measurement in filtered water). Using full scale validated SCADA data, the simplified calculation of CT performed at the plant was shown to largely underestimate the risk relative to a more detailed CT calculation, which takes into consideration the downtime and system failure events identified at the plant (1.46E-03 vs. 3.93E-02 for the mean risk).
Higgs-Boson Decay to Four Fermions Including a Single Top Quark Below $t \\bar t$ Threshold
Pois, H; Yuan, T C; Pois, Heath; Weiler, Thomas J.; Yuan, Tzu Chiang
1993-01-01
The rare decay modes Higgs $\\rightarrow$ four light fermions, and Higgs $\\rightarrow$ single top-quark + three light fermions for $m_t100\\GeV$ makes the second amplitude competitive or dominant for most $M_H,m_t$ values. Thus the Higgs decay rate to single top directly probes the SM universal mechanism generating both gauge boson and fermion masses, and offers a means to infer the Higgs-$t \\bar t$ Yukawa coupling when $H\\rightarrow t \\bar t$ is kinematically disallowed. We find that the modes $pp\\rightarrow Xt\\bar t(H\\rightarrow t\\bar b W^{(*)})$ at the SSC, and $e^+ e^-\\rightarrow Z\\,or\\,\
The Single-Vendor-Single-Buyer Integrated Production-Shipment Model with Stock Dependent Demand Rate
Institute of Scientific and Technical Information of China (English)
无
2002-01-01
In the integrated production-shipment models for the single-vendor-single-buyer system presented hitherto, thedemand rate of items is treated as a constant. However, many researchers have observed that the presence of morequantities of the same product tends to attract more customers. This suggests that the demand rate should depend on thestock level. This paper presents a single-vendor-single-buyer production-shipment model with the stock dependentdemand rate, based on the demand rate linearly depending upon the stock level at any instant of time.
Institute of Scientific and Technical Information of China (English)
何雪松; 王旭永; 冯正进; 章志新; 杨钦廉
2003-01-01
A nonlinear mathematical model of the injection molding process for electrohydraulic servo injection molding machine (IMM) is developed.It was found necessary to consider the characteristics of asymmetric cylinder for electrohydraulic servo IMM.The model is based on the dynamics of the machine including servo valve,asymmetric cylinder and screw,and the non-Newtonian flow behavior of polymer melt in injection molding is also considered.The performance of the model was evaluated based on novel approach of molding - injection and compress molding,and the results of simulation and experimental data demonstrate the effectiveness of the model.
a Better Description of Liquid Jet Breakup Using a Spatial Model Including Viscous Effects.
Hammerschlag, William Brian
Theoretical models describing the operation and disintegration of a liquid jet are often based on an approximate solution of an inviscid jet in the temporal frame of reference. These models provide only a fair first order prediction of growth rate and breakoff length, and are based solely on a surface tension induced instability. A spatial model yielding jet growth rate and including both jet and surrounding atmosphere viscosity and density is now developed. This model is seen to reproduce all the features and limitations of the Weber viscous jet theory. When tested against experiments of water, water and glycerol mixes and binary eutectic tin/lead solder, only fair agreement is observed.
Strong earthquakes included «by chance» in Italian catalogues: single cases or a hint of more?
Directory of Open Access Journals (Sweden)
V. Castelli
2003-06-01
Full Text Available In principle, a few of the strong earthquakes (I0 >= 8/9, M >= 5.8 that affected Italy in the past may still be missing from parametric catalogues or be listed there as lesser events, their actual strength unrealized. This seems a reasonable enough inference, given that some strong earthquakes were listed by catalogues quite by chance, from information drawn, mainly or even solely, from a single source. Had this source been destroyed before catalogue compilers were able to consider it, or had they for any reason overlooked it, the earthquake it recorded could also have been missed or underestimated. This paper examines the two most peculiar Italian cases of «single- source earthquakes» (1561 «Vallo di Diano?»; 1639 «Amatrice?». Is all relevant information on each event really tied up in a single source? And if so, why? Finally, are these cases unique or do they share any common features that could, by occurring elsewhere, act as markers for situations where forgotten earthquakes could still lurk undetected?
Energy Technology Data Exchange (ETDEWEB)
Yun, Seungman [Imaging Research Laboratories, Robarts Research Institute, The University of Western Ontario, 100 Perth Drive, London, Ontario N6A 5K8 (Canada); School of Mechanical Engineering, Pusan National University, Jangjeon-dong, Geumjeong-gu, Busan 609-735 (Korea, Republic of); Tanguay, Jesse; Cunningham, Ian A. [Imaging Research Laboratories, Robarts Research Institute, The University of Western Ontario, 100 Perth Drive, London, Ontario N6A 5K8 (Canada); Kim, Ho Kyung [School of Mechanical Engineering, Pusan National University, Jangjeon-dong, Geumjeong-gu, Busan 609-735 (Korea, Republic of)
2013-04-15
Purpose: Theoretical models of the detective quantum efficiency (DQE) of x-ray detectors are an important step in new detector development by providing an understanding of performance limitations and benchmarks. Previous cascaded-systems analysis (CSA) models accounted for photoelectric interactions only. This paper describes an extension of the CSA approach to incorporate coherent and incoherent interactions, important for low-Z detectors such as silicon and selenium. Methods: A parallel-cascade approach is used to describe the three types of x-ray interactions. The description of incoherent scatter required developing expressions for signal and noise transfer through an 'energy-labeled reabsorption' process where the parameters describing reabsorption are random functions of the scatter photon energy. The description of coherent scatter requires the use of scatter form factors that may not be accurate for some crystalline detector materials. The model includes the effects of scatter reabsorption and escape, charge collection, secondary quantum sinks, noise aliasing, and additive noise. Model results are validated by Monte Carlo calculations for Si and Se detectors assuming free-atom atomic form factors. Results: The new signal and noise transfer expressions were validated by showing agreement with Monte Carlo results. Coherent and incoherent scatter can degrade the DQE of Si and sometimes Se detectors depending on detector thickness and incident-photon energy. Incoherent scatter can produce a substantial low-frequency drop in the modulation transfer function and DQE. Conclusions: A generally useful CSA model of the DQE is described that is believed valid for any single-Z material up to 10 cycles/mm at both mammographic and radiographic energies within the limitations of Fourier-based linear-systems models and the use of coherent-scatter form factors. The model describes a substantial low-frequency drop in the DQE of Si systems due to incoherent scatter
Yun, Seungman; Tanguay, Jesse; Kim, Ho Kyung; Cunningham, Ian A
2013-04-01
Theoretical models of the detective quantum efficiency (DQE) of x-ray detectors are an important step in new detector development by providing an understanding of performance limitations and benchmarks. Previous cascaded-systems analysis (CSA) models accounted for photoelectric interactions only. This paper describes an extension of the CSA approach to incorporate coherent and incoherent interactions, important for low-Z detectors such as silicon and selenium. A parallel-cascade approach is used to describe the three types of x-ray interactions. The description of incoherent scatter required developing expressions for signal and noise transfer through an "energy-labeled reabsorption" process where the parameters describing reabsorption are random functions of the scatter photon energy. The description of coherent scatter requires the use of scatter form factors that may not be accurate for some crystalline detector materials. The model includes the effects of scatter reabsorption and escape, charge collection, secondary quantum sinks, noise aliasing, and additive noise. Model results are validated by Monte Carlo calculations for Si and Se detectors assuming free-atom atomic form factors. The new signal and noise transfer expressions were validated by showing agreement with Monte Carlo results. Coherent and incoherent scatter can degrade the DQE of Si and sometimes Se detectors depending on detector thickness and incident-photon energy. Incoherent scatter can produce a substantial low-frequency drop in the modulation transfer function and DQE. A generally useful CSA model of the DQE is described that is believed valid for any single-Z material up to 10 cycles/mm at both mammographic and radiographic energies within the limitations of Fourier-based linear-systems models and the use of coherent-scatter form factors. The model describes a substantial low-frequency drop in the DQE of Si systems due to incoherent scatter above 20-40 keV.
Energy Technology Data Exchange (ETDEWEB)
Avancini, S.S.; Marinelli, J.R. [Universidade Federal de Santa Catarina Florianopolis, Depto de Fisica - CFM, Florianopolis (Brazil); Carlson, B.V. [Instituto Tecnologico de Aeronautica, Sao Jose dos Campos (Brazil)
2013-06-15
Relativistic models for finite nuclei contain spurious center-of-mass motion in most applications for the nuclear many-body problem, where the nuclear wave function is taken as a single Slater determinant within a space-fixed frame description. We use the Peierls-Yoccoz projection method, previously developed for relativistic approaches together with a reparametrization of the coupling constants that fits binding energies and charge radius and apply our results to calculate elastic electron scattering monopole charge form factors for light nuclei. (orig.)
Nijp, Jelmer J; Metselaar, Klaas; Limpens, Juul; Teutschbein, Claudia; Peichl, Matthias; Nilsson, Mats B; Berendse, Frank; van der Zee, Sjoerd E A T M
2017-02-15
The water content of the topsoil is one of the key factors controlling biogeochemical processes, greenhouse gas emissions and biosphere - atmosphere interactions in many ecosystems, particularly in northern peatlands. In these wetland ecosystems, the water content of the photosynthetic active peatmoss layer is crucial for ecosystem functioning and carbon sequestration, and is sensitive to future shifts in rainfall and drought characteristics. Current peatland models differ in the degree in which hydrological feedbacks are included, but how this affects peatmoss drought projections is unknown. The aim of this paper was to systematically test whether the level of hydrological detail in models could bias projections of water content and drought stress for peatmoss in northern peatlands using downscaled projections for rainfall and potential evapotranspiration in the current (1991-2020) and future climate (2061-2090). We considered four model variants that either include or exclude moss (rain)water storage and peat volume change, as these are two central processes in the hydrological self-regulation of peatmoss carpets. Model performance was validated using field data of a peatland in northern Sweden. Including moss water storage as well as peat volume change resulted in a significant improvement of model performance, despite the extra parameters added. The best performance was achieved if both processes were included. Including moss water storage and peat volume change consistently reduced projected peatmoss drought frequency with >50%, relative to the model excluding both processes. Projected peatmoss drought frequency in the growing season was 17% smaller under future climate than current climate, but was unaffected by including the hydrological self-regulating processes. Our results suggest that ignoring these two fine-scale processes important in hydrological self-regulation of northern peatlands will have large consequences for projected climate change impact on
Single-cluster dynamics for the random-cluster model
Deng, Y.; Qian, X.; Blöte, H.W.J.
2009-01-01
We formulate a single-cluster Monte Carlo algorithm for the simulation of the random-cluster model. This algorithm is a generalization of the Wolff single-cluster method for the q-state Potts model to noninteger values q>1. Its results for static quantities are in a satisfactory agreement with those
Single-cluster dynamics for the random-cluster model
Deng, Y.; Qian, X.; Blöte, H.W.J.
2009-01-01
We formulate a single-cluster Monte Carlo algorithm for the simulation of the random-cluster model. This algorithm is a generalization of the Wolff single-cluster method for the q-state Potts model to noninteger values q>1. Its results for static quantities are in a satisfactory agreement with those
Block Entanglement in the Single-Hole Hubbard Model
Institute of Scientific and Technical Information of China (English)
YAO Kai-Lun; SUN Xiao-Zhong; LIU Zu-Li; LI Yan-Chao; YU Li; GAO Guo-Ying
2006-01-01
@@ We investigate the distribution of the entanglement of the one-dimensional single-hole Hubbard model (HM)and study the relationship between the entanglement and quantum phase transition in the model. The von Neumann entropy of a block with neighbouring spins L for a single-hole HM is calculated using the densitymatrix renormalization group.
Stability analysis of the extended ADI-FDTD technique including lumped models
Institute of Scientific and Technical Information of China (English)
CHEN ZhiHui; CHU QingXin
2008-01-01
The numerical stability of the extended alternating-direction-implicit-finite-difference-time-domain (ADI-FDTD) method including lumped models is analyzed.Three common lumped models are investigated:resistor,capacitor,and inductor,and three different formulations for each model are analyzed:the explicit,semi-implicit and implicit schemes.Analysis results show that the extended ADI-FDTD algorithm is not unconditionally stable in the explicit scheme case,and the stability criterion depends on the value of lumped models,but in the semi-implicit and implicit cases,the algorithm is stable.Finally,two simple microstrip circuits including lumped elements are simulated to demonstrate validity of the theoretical results.
Directory of Open Access Journals (Sweden)
Shengxiang Jia
2003-01-01
Full Text Available This article presents a dynamic model of three shafts and two pair of gears in mesh, with 26 degrees of freedom, including the effects of variable tooth stiffness, pitch and profile errors, friction, and a localized tooth crack on one of the gears. The article also details howgeometrical errors in teeth can be included in a model. The model incorporates the effects of variations in torsional mesh stiffness in gear teeth by using a common formula to describe stiffness that occurs as the gears mesh together. The comparison between the presence and absence of geometrical errors in teeth was made by using Matlab and Simulink models, which were developed from the equations of motion. The effects of pitch and profile errors on the resultant input pinion angular velocity coherent-signal of the input pinion's average are discussed by investigating some of the common diagnostic functions and changes to the frequency spectra results.
SAMI2-PE: A model of the ionosphere including multistream interhemispheric photoelectron transport
Varney, R. H.; Swartz, W. E.; Hysell, D. L.; Huba, J. D.
2012-06-01
In order to improve model comparisons with recently improved incoherent scatter radar measurements at the Jicamarca Radio Observatory we have added photoelectron transport and energy redistribution to the two dimensional SAMI2 ionospheric model. The photoelectron model uses multiple pitch angle bins, includes effects associated with curved magnetic field lines, and uses an energy degradation procedure which conserves energy on coarse, non-uniformly spaced energy grids. The photoelectron model generates secondary electron production rates and thermal electron heating rates which are then passed to the fluid equations in SAMI2. We then compare electron and ion temperatures and electron densities of this modified SAMI2 model with measurements of these parameters over a range of altitudes from 90 km to 1650 km (L = 1.26) over a 24 hour period. The new electron heating model is a significant improvement over the semi-empirical model used in SAMI2. The electron temperatures above the F-peak from the modified model qualitatively reproduce the shape of the measurements as functions of time and altitude and quantitatively agree with the measurements to within ˜30% or better during the entire day, including during the rapid temperature increase at dawn.
Cappellari, Michele
2015-01-01
Cappellari (2008) presented a flexible and efficient method to model the stellar kinematics of anisotropic axisymmetric and spherical stellar systems. The spherical formalism could be used to model the line-of-sight velocity second moments allowing for essentially arbitrary radial variation in the anisotropy and general luminous and total density profiles. Here we generalize the spherical formalism by providing the expressions for all three components of the projected second moments, including the two proper motion components. A reference implementation is now included in the public JAM package available at http://purl.org/cappellari/software
Modeling Within-Host Dynamics of Influenza Virus Infection Including Immune Responses
Pawelek, Kasia A.; Huynh, Giao T; Michelle Quinlivan; Ann Cullinane; Libin Rong; Perelson, Alan S.
2012-01-01
Influenza virus infection remains a public health problem worldwide. The mechanisms underlying viral control during an uncomplicated influenza virus infection are not fully understood. Here, we developed a mathematical model including both innate and adaptive immune responses to study the within-host dynamics of equine influenza virus infection in horses. By comparing modeling predictions with both interferon and viral kinetic data, we examined the relative roles of target cell availability, ...
A lumped element transformer model including core losses and winding impedances
Ribbenfjärd, David
2007-01-01
In order to design a power transformer it is important to understand its internal electromagnetic behaviour. That can be obtained by measurements on physical transformers, analytical expressions and computer simulations. One benefit with simulations is that the transformer can be studied before it is built physically and that the consequences of changing dimensions and parameters easily can be tested. In this thesis a time-domain transformer model is presented. The model includes core losses ...
Target echo strength modelling at FOI, including results from the BeTSSi II workshop
Östberg, Martin
2016-01-01
An overview of the target echo strength (TS) modelling capacity at the Swedish Defense Research Agency (FOI) is presented. The modelling methods described range from approximate ones, such as raytracing and Kirchhoff approximation codes, to high accuracy full field codes including boundary integral equation methods and finite elements methods. Illustrations of the applicability of the codes are given for a few simple cases tackled during the BeTTSi II (Benchmark Target Echo Strength Simulation) workshop held in Kiel 2014.
Including leakage in network models: an application to calibrate leak valves in EPANET
Cobacho Jordán, Ricardo; Arregui de la Cruz, Francisco; Soriano Olivares, Javier; Cabrera Rochera, Enrique
2015-01-01
EPANET is one of the most widely used software packages for water network hydraulic modelling, and is especially interesting for educational and research purposes because it is in the public domain. However, EPANET simulations are demand-driven, and the program does not include a specific functionality to model water leakage, which is pressure-driven. Consequently, users are required to deal with this drawback by themselves. As a general solution for this problem, this paper presents a method...
Hincapié, Doracelly; Ospina, Juan
2014-06-01
Recently, a mathematical model of pandemic influenza was proposed including typical control strategies such as antivirals, vaccination and school closure; and considering explicitly the effects of immunity acquired from the early outbreaks on the ulterior outbreaks of the disease. In such model the algebraic expression for the basic reproduction number (without control strategies) and the effective reproduction number (with control strategies) were derived and numerically estimated. A drawback of this model of pandemic influenza is that it ignores the effects of the differential susceptibility due to immunosuppression and the effects of the complexity of the actual contact networks between individuals. We have developed a generalized model which includes such effects of heterogeneity. Specifically we consider the influence of the air network connectivity in the spread of pandemic influenza and the influence of the immunosuppresion when the population is divided in two immune classes. We use an algebraic expression, namely the Tutte polynomial, to characterize the complexity of the contact network. Until now, The influence of the air network connectivity in the spread of pandemic influenza has been studied numerically, but not algebraic expressions have been used to summarize the level of network complexity. The generalized model proposed here includes the typical control strategies previously mentioned (antivirals, vaccination and school closure) combined with restrictions on travel. For the generalized model the corresponding reproduction numbers will be algebraically computed and the effect of the contact network will be established in terms of the Tutte polynomial of the network.
Vijayashree, M.; Uthayakumar, R.
2017-03-01
Lead time is one of the major limits that affect planning at every stage of the supply chain system. In this paper, we study a continuous review inventory model. This paper investigates the ordering cost reductions are dependent on lead time. This study addressed two-echelon supply chain problem consisting of a single vendor and a single buyer. The main contribution of this study is that the integrated total cost of the single vendor and the single buyer integrated system is analyzed by adopting two different (linear and logarithmic) types ordering cost reductions act dependent on lead time. In both cases, we develop effective solution procedures for finding the optimal solution and then illustrative numerical examples are given to illustrate the results. The solution procedure is to determine the optimal solutions of order quantity, ordering cost, lead time and the number of deliveries from the single vendor and the single buyer in one production run, so that the integrated total cost incurred has the minimum value. Ordering cost reduction is the main aspect of the proposed model. A numerical example is given to validate the model. Numerical example solved by using Matlab software. The mathematical model is solved analytically by minimizing the integrated total cost. Furthermore, the sensitivity analysis is included and the numerical examples are given to illustrate the results. The results obtained in this paper are illustrated with the help of numerical examples. The sensitivity of the proposed model has been checked with respect to the various major parameters of the system. Results reveal that the proposed integrated inventory model is more applicable for the supply chain manufacturing system. For each case, an algorithm procedure of finding the optimal solution is developed. Finally, the graphical representation is presented to illustrate the proposed model and also include the computer flowchart in each model.
The No-Core Gamow Shell Model: Including the continuum in the NCSM
Barrett, B R; Michel, N; Płoszajczak, M
2015-01-01
We are witnessing an era of intense experimental efforts that will provide information about the properties of nuclei far from the line of stability, regarding resonant and scattering states as well as (weakly) bound states. This talk describes our formalism for including these necessary ingredients into the No-Core Shell Model by using the Gamow Shell Model approach. Applications of this new approach, known as the No-Core Gamow Shell Model, both to benchmark cases as well as to unstable nuclei will be given.
Energy Technology Data Exchange (ETDEWEB)
Chen, Y W [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China); Zhang, L F [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China); Huang, J P [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China)
2007-07-20
By using theoretical analysis and computer simulations, we develop the Watts-Strogatz network model by including degree distribution, in an attempt to improve the comparison between characteristic path lengths and clustering coefficients predicted by the original Watts-Strogatz network model and those of the real networks with the small-world property. Good agreement between the predictions of the theoretical analysis and those of the computer simulations has been shown. It is found that the developed Watts-Strogatz network model can fit the real small-world networks more satisfactorily. Some other interesting results are also reported by adjusting the parameters in a model degree-distribution function. The developed Watts-Strogatz network model is expected to help in the future analysis of various social problems as well as financial markets with the small-world property.
Dynamics Analysis of an HIV Infection Model including Infected Cells in an Eclipse Stage
Directory of Open Access Journals (Sweden)
Shengyu Zhou
2013-01-01
Full Text Available In this paper, an HIV infection model including an eclipse stage of infected cells is considered. Some quicker cells in this stage become productively infected cells, a portion of these cells are reverted to the uninfected class, and others will be latent down in the body. We consider CTL-response delay in this model and analyze the effect of time delay on stability of equilibrium. It is shown that the uninfected equilibrium and CTL-absent infection equilibrium are globally asymptotically stable for both ODE and DDE model. And we get the global stability of the CTL-present equilibrium for ODE model. For DDE model, we have proved that the CTL-present equilibrium is locally asymptotically stable in a range of delays and also have studied the existence of Hopf bifurcations at the CTL-present equilibrium. Numerical simulations are carried out to support our main results.
Lee, Yunjeong; Lim, Yeongjin; Shin, Heungjoo
2016-06-01
Reproducible research results for nanofluidics and their applications require viable fabrication technologies to produce nanochannels integrated with microchannels that can guide fluid flow and analytes into/out of the nanochannels. We present the simple fabrication of mixed-scale polydimethylsiloxane (PDMS) channel networks consisting of nanochannels and microchannels via a single molding process using a monolithic mixed-scale carbon mold. The monolithic carbon mold is fabricated by pyrolyzing a polymer mold patterned by photolithography. During pyrolysis, the polymer mold shrinks by ~90%, which enables nanosized carbon molds to be produced without a complex nanofabrication process. Because of the good adhesion between the polymer mold and the Si substrate, non-uniform volume reduction occurs during pyrolysis resulting in the formation of curved carbon mold side walls. These curved side walls and the relatively low surface energy of the mold provide efficient demolding of the PDMS channel networks. In addition, the trigonal prismatic shape of the polymer is converted into to a Kingfisher-beak-shaped carbon structure due to the non-uniform volume reduction. The transformation of this mold architecture produces a PDMS Kingfisher-beak-shaped 3D microfunnel that connects the microchannel and the nanochannel smoothly. The smooth reduction in the cross-sectional area of the 3D microfunnels enables efficient single microparticle trapping at the nanochannel entrance; this is beneficial for studies of cell transfection.Reproducible research results for nanofluidics and their applications require viable fabrication technologies to produce nanochannels integrated with microchannels that can guide fluid flow and analytes into/out of the nanochannels. We present the simple fabrication of mixed-scale polydimethylsiloxane (PDMS) channel networks consisting of nanochannels and microchannels via a single molding process using a monolithic mixed-scale carbon mold. The monolithic
A statistical model including age to predict passenger postures in the rear seats of automobiles.
Park, Jangwoon; Ebert, Sheila M; Reed, Matthew P; Hallman, Jason J
2016-06-01
Few statistical models of rear seat passenger posture have been published, and none has taken into account the effects of occupant age. This study developed new statistical models for predicting passenger postures in the rear seats of automobiles. Postures of 89 adults with a wide range of age and body size were measured in a laboratory mock-up in seven seat configurations. Posture-prediction models for female and male passengers were separately developed by stepwise regression using age, body dimensions, seat configurations and two-way interactions as potential predictors. Passenger posture was significantly associated with age and the effects of other two-way interaction variables depended on age. A set of posture-prediction models are presented for women and men, and the prediction results are compared with previously published models. This study is the first study of passenger posture to include a large cohort of older passengers and the first to report a significant effect of age for adults. The presented models can be used to position computational and physical human models for vehicle design and assessment. Practitioner Summary: The significant effects of age, body dimensions and seat configuration on rear seat passenger posture were identified. The models can be used to accurately position computational human models or crash test dummies for older passengers in known rear seat configurations.
Kelly, Jeff; Betts, Juan Fernando; Fuller, Chris
2000-01-01
The study of normal impedance of perforated plate acoustic liners including the effect of bias flow was studied. Two impedance models were developed by modeling the internal flows of perforate orifices as infinite tubes with the inclusion of end corrections to handle finite length effects. These models assumed incompressible and compressible flows, respectively, between the far field and the perforate orifice. The incompressible model was used to predict impedance results for perforated plates with percent open areas ranging from 5% to 15%. The predicted resistance results showed better agreement with experiments for the higher percent open area samples. The agreement also tended to deteriorate as bias flow was increased. For perforated plates with percent open areas ranging from 1% to 5%, the compressible model was used to predict impedance results. The model predictions were closer to the experimental resistance results for the 2% to 3% open area samples. The predictions tended to deteriorate as bias flow was increased. The reactance results were well predicted by the models for the higher percent open area, but deteriorated as the percent open area was lowered (5%) and bias flow was increased. A fit was done on the incompressible model to the experimental database. The fit was performed using an optimization routine that found the optimal set of multiplication coefficients to the non-dimensional groups that minimized the least squares slope error between predictions and experiments. The result of the fit indicated that terms not associated with bias flow required a greater degree of correction than the terms associated with the bias flow. This model improved agreement with experiments by nearly 15% for the low percent open area (5%) samples when compared to the unfitted model. The fitted model and the unfitted model performed equally well for the higher percent open area (10% and 15%).
Fusion rules for the logarithmic $N=1$ superconformal minimal models II: including the Ramond sector
Canagasabey, Michael
2015-01-01
The Virasoro logarithmic minimal models were intensively studied by several groups over the last ten years with much attention paid to the fusion rules and the structures of the indecomposable representations that fusion generates. The analogous study of the fusion rules of the $N=1$ superconformal logarithmic minimal models was initiated in arXiv:1504.03155 as a continuum counterpart to the lattice explorations of arXiv:1312.6763. These works restricted fusion considerations to Neveu-Schwarz representations. Here, this is extended to include the Ramond sector. Technical advances that make this possible include a fermionic Verlinde formula applicable to logarithmic conformal field theories and a twisted version of the fusion algorithm of Nahm and Gaberdiel-Kausch. The results include the first construction and detailed analysis of logarithmic structures in the Ramond sector.
MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering
Directory of Open Access Journals (Sweden)
M. Proksch
2015-08-01
Full Text Available The Microwave Emission Model of Layered Snowpacks (MEMLS was originally developed for microwave emissions of snowpacks in the frequency range 5–100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like- and cross-polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS is set up in a way that snow input parameters can be derived by objective measurement methods which avoid fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx (Nordic Snow Radar Experiment campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in Matlab and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.
MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering
Directory of Open Access Journals (Sweden)
M. Proksch
2015-03-01
Full Text Available The Microwave Emission Model of Layered Snowpacks (MEMLS was originally developed for microwave emissions of snowpacks in the frequency range 5–100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like and cross polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS is set up in a way that snow input parameters can be derived by objective measurement methods which avoids fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in MATLAB and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.
MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering
Proksch, M.; Mätzler, C.; Wiesmann, A.; Lemmetyinen, J.; Schwank, M.; Löwe, H.; Schneebeli, M.
2015-08-01
The Microwave Emission Model of Layered Snowpacks (MEMLS) was originally developed for microwave emissions of snowpacks in the frequency range 5-100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like- and cross-polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS) is set up in a way that snow input parameters can be derived by objective measurement methods which avoid fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx (Nordic Snow Radar Experiment) campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in Matlab and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.
Diagnosing Lee Wave Rotor Onset Using a Linear Model Including a Boundary Layer
Directory of Open Access Journals (Sweden)
Miguel A. C. Teixeira
2017-01-01
Full Text Available A linear model is used to diagnose the onset of rotors in flow over 2D hills, for atmospheres that are neutrally stratified near the surface and stably stratified aloft, with a sharp temperature inversion in between, where trapped lee waves may propagate. This is achieved by coupling an inviscid two-layer mountain-wave model and a bulk boundary-layer model. The full model shows some ability to diagnose flow stagnation associated with rotors as a function of key input parameters, such as the Froude number and the height of the inversion, in numerical simulations and laboratory experiments carried out by previous authors. While calculations including only the effects of mean flow attenuation and velocity perturbation amplification within the surface layer represent flow stagnation fairly well in the more non-hydrostatic cases, only the full model, taking into account the feedback of the surface layer on the inviscid flow, satisfactorily predicts flow stagnation in the most hydrostatic case, although the corresponding condition is unable to discriminate between rotors and hydraulic jumps. Versions of the model not including this feedback severely underestimate the amplitude of trapped lee waves in that case, where the Fourier transform of the hill has zeros, showing that those waves are not forced directly by the orography.
Diehl, S; Zambrano, J; Carlsson, B
2016-01-01
A reduced model of a completely stirred-tank bioreactor coupled to a settling tank with recycle is analyzed in its steady states. In the reactor, the concentrations of one dominant particulate biomass and one soluble substrate component are modelled. While the biomass decay rate is assumed to be constant, growth kinetics can depend on both substrate and biomass concentrations, and optionally model substrate inhibition. Compressive and hindered settling phenomena are included using the Bürger-Diehl settler model, which consists of a partial differential equation. Steady-state solutions of this partial differential equation are obtained from an ordinary differential equation, making steady-state analysis of the entire plant difficult. A key result showing that the ordinary differential equation can be replaced with an approximate algebraic equation simplifies model analysis. This algebraic equation takes the location of the sludge-blanket during normal operation into account, allowing for the limiting flux capacity caused by compressive settling to easily be included in the steady-state mass balance equations for the entire plant system. This novel approach grants the possibility of more realistic solutions than other previously published reduced models, comprised of yet simpler settler assumptions. The steady-state concentrations, solids residence time, and the wastage flow ratio are functions of the recycle ratio. Solutions are shown for various growth kinetics; with different values of biomass decay rate, influent volumetric flow, and substrate concentration.
Institute of Scientific and Technical Information of China (English)
Nan Liang; Pu-Xun Wua; Zong-Hong Zhu
2011-01-01
We constrain the Cardassian expansion models from the latest observations,including the updated Gamma-ray bursts (GRBs),which are calibrated using a cosmology independent method from the Union2 compilation of type Ia supernovae (SNe Ia).By combining the GRB data with the joint observations from the Union2SNe Ia set,along with the results from the Cosmic Microwave Background radiation observation from the seven-year Wilkinson Microwave Anisotropy Probe and the baryonic acoustic oscillation observation galaxy sample from the spectroscopic Sloan Digital Sky Survey Data Release,we find significant constraints on the model parameters of the original Cardassian model ΩM0=n 282+0.015-0.014,n=0.03+0.05-0.05;and n = -0.16+0.25-3.26,β=-0.76+0.34-0.58 of the modified polytropic Cardassian model,which are consistent with the ACDM model in a l-σ confidence region.From the reconstruction of the deceleration parameter q(z) in Cardassian models,we obtain the transition redshift ZT = 0.73 ± 0.04 for the original Cardassian model and ZT = 0.68 ± 0.04 for the modified polytropic Cardassian model.
Safe distance car-following model including backward-looking and its stability analysis
Yang, Da; Jin, Peter Jing; Pu, Yun; Ran, Bin
2013-03-01
The focus of this paper is the car-following behavior including backward-looking, simply called the bi-directional looking car-following behavior. This study is motivated by the potential changes of the physical properties of traffic flow caused by the fast developing intelligent transportation system (ITS), especially the new connected vehicle technology. Existing studies on this topic focused on general motors (GM) models and optimal velocity (OV) models. The safe distance car-following model, Gipps' model, which is more widely used in practice have not drawn too much attention in the bi-directional looking context. This paper explores the property of the bi-directional looking extension of Gipps' safe distance model. The stability condition of the proposed model is derived using the linear stability theory and is verified using numerical simulations. The impacts of the driver and vehicle characteristics appeared in the proposed model on the traffic flow stability are also investigated. It is found that taking into account the backward-looking effect in car-following has three types of effect on traffic flow: stabilizing, destabilizing and producing non-physical phenomenon. This conclusion is more sophisticated than the study results based on the OV bi-directional looking car-following models. Moreover, the drivers who have the smaller reaction time or the larger additional delay and think the other vehicles have larger maximum decelerations can stabilize traffic flow.
Finite element modeling of plasmon based single-photon sources
DEFF Research Database (Denmark)
Chen, Yuntian; Gregersen, Niels; Nielsen, Torben Roland;
2011-01-01
A finite element method (FEM) approach of calculating a single emitter coupled to plasmonic waveguides has been developed. The method consists of a 2D model and a 3D model: (I) In the 2D model, we have calculated the spontaneous emission decay rate of a single emitter into guided plasmonic modes...... waveguides with different geometries, as long as only one guided plasmonic mode is predominantly excited....
DEFF Research Database (Denmark)
Bahman, Amir Sajjad; Ma, Ke; Blaabjerg, Frede
2017-01-01
Detailed thermal dynamics of high power IGBT modules are important information for the reliability analysis and thermal design of power electronic systems. However, the existing thermal models have their limits to correctly predict these complicated thermal behavior in the IGBTs: The typically used...... thermal distribution under long-term studies. Meanwhile the boundary conditions for the thermal analysis are modeled and included, which can be adapted to different real field applications of power electronic converters. Finally, the accuracy of the proposed thermal model is verified by FEM simulations...... thermal model based on one-dimensional RC lumps have limits to provide temperature distributions inside the device, moreover some variable factors in the real-field applications like the cooling and heating conditions of the converter cannot be adapted. On the other hand, the more advanced three...
DEFF Research Database (Denmark)
Bahman, Amir Sajjad; Ma, Ke; Blaabjerg, Frede
2017-01-01
Detailed thermal dynamics of high power IGBT modules are important information for the reliability analysis and thermal design of power electronic systems. However, the existing thermal models have their limits to correctly predict these complicated thermal behavior in the IGBTs: The typically used...... thermal distribution under long-term studies. Meanwhile the boundary conditions for the thermal analysis are modeled and included, which can be adapted to different real-field applications of power electronic converters. Finally, the accuracy of the proposed thermal model is verified by FEM simulations...... thermal model based on one-dimensional RC lumps have limits to provide temperature distributions inside the device, moreover some variable factors in the real-field applications like the cooling and heating conditions of the converter cannot be adapted. On the other hand, the more advanced three...
Modeling the anisotropic shock response of single-crystal RDX
Luscher, Darby
Explosives initiate under impacts whose energy, if distributed homogeneously throughout the material, translates to temperature increases that are insufficient to drive the rapid chemistry observed. Heterogeneous thermomechanical interactions at the meso-scale (i.e. between single-crystal and macroscale) leads to the formation of localized hot spots. Direct numerical simulations of mesoscale response can contribute to our understanding of hot spots if they include the relevant deformation mechanisms that are essential to the nonlinear thermomechanical response of explosive molecular crystals. We have developed a single-crystal model for the finite deformation thermomechanical response of cyclotrimethylene trinitramine (RDX). Because of the low symmetry of RDX, a complete description of nonlinear thermoelasticity requires a careful decomposition of free energy into components that represent the pressure-volume-temperature (PVT) response and the coupling between isochoric deformation and both deviatoric and hydrostatic stresses. An equation-of-state (EOS) based on Debye theory that defines the PVT response was constructed using experimental data and density functional theory calculations. This EOS replicates the equilibrium states of phase transformation from alpha to gamma polymorphs observed in static high-pressure experiments. Lattice thermoelastic parameters defining the coupled isochoric free energy were obtained from molecular dynamics calculations and previous experimental data. Anisotropic crystal plasticity is modeled using Orowan's expression relating slip rate to dislocation density and velocity. Details of the theory will be presented followed by discussion of simulations of flyer plate impact experiments, including recent experiments diagnosed with in situ X-ray diffraction at the Advanced Photon Source. Impact conditions explored within the experimental effort have spanned shock pressures ranging from 1-10 GPa for several crystallographic orientations
WINKLER'S SINGLE-PARAMETER SUBGRADE MODEL FROM ...
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[3, 9]. However, mainly due to the simplicity of Winkler's model in practical applications and .... this case, the coefficient B takes the dimension of a ... In plane-strain problems, the assumption of ... loaded circular region; s is the radial coordinate.
Morin, José A.; Ibarra, Borja; Cao, Francisco J.
2016-05-01
Single-molecule manipulation experiments of molecular motors provide essential information about the rate and conformational changes of the steps of the reaction located along the manipulation coordinate. This information is not always sufficient to define a particular kinetic cycle. Recent single-molecule experiments with optical tweezers showed that the DNA unwinding activity of a Phi29 DNA polymerase mutant presents a complex pause behavior, which includes short and long pauses. Here we show that different kinetic models, considering different connections between the active and the pause states, can explain the experimental pause behavior. Both the two independent pause model and the two connected pause model are able to describe the pause behavior of a mutated Phi29 DNA polymerase observed in an optical tweezers single-molecule experiment. For the two independent pause model all parameters are fixed by the observed data, while for the more general two connected pause model there is a range of values of the parameters compatible with the observed data (which can be expressed in terms of two of the rates and their force dependencies). This general model includes models with indirect entry and exit to the long-pause state, and also models with cycling in both directions. Additionally, assuming that detailed balance is verified, which forbids cycling, this reduces the ranges of the values of the parameters (which can then be expressed in terms of one rate and its force dependency). The resulting model interpolates between the independent pause model and the indirect entry and exit to the long-pause state model
Xia, Mingjun; Ghafouri-Shiraz, H
2016-03-01
This paper reports a new model for strained quantum well lasers, which are based on the quantum well transmission line modeling method where effects of both carrier transport and carrier heating have been included. We have applied this new model and studied the effect of carrier transport on the output waveform of a strained quantum well laser both in time and frequency domains. It has been found that the carrier transport increases the turn-on, turn-off delay times and damping of the quantum well laser transient response. Also, analysis in the frequency domain indicates that the carrier transport causes the output spectrum of the quantum well laser in steady state to exhibit a redshift which has a narrower bandwidth and lower magnitude. The simulation results of turning-on transients obtained by the proposed model are compared with those obtained by the rate equation laser model. The new model has also been used to study the effects of pump current spikes on the laser output waveforms properties, and it was found that the presence of current spikes causes (i) wavelength blueshift, (ii) larger bandwidth, and (iii) reduces the magnitude and decreases the side-lobe suppression ratio of the laser output spectrum. Analysis in both frequency and time domains confirms that the new proposed model can accurately predict the temporal and spectral behaviors of strained quantum well lasers.
A numerical model including PID control of a multizone crystal growth furnace
Panzarella, Charles H.; Kassemi, Mohammad
This paper presents a 2D axisymmetric combined conduction and radiation model of a multizone crystal growth furnace. The model is based on a programmable multizone furnace (PMZF) designed and built at NASA Lewis Research Center for growing high quality semiconductor crystals. A novel feature of this model is a control algorithm which automatically adjusts the power in any number of independently controlled heaters to establish the desired crystal temperatures in the furnace model. The control algorithm eliminates the need for numerous trial and error runs previously required to obtain the same results. The finite element code, FIDAP, used to develop the furnace model, was modified to directly incorporate the control algorithm. This algorithm, which presently uses PID control, and the associated heat transfer model are briefly discussed. Together, they have been used to predict the heater power distributions for a variety of furnace configurations and desired temperature profiles. Examples are included to demonstrate the effectiveness of the PID controlled model in establishing isothermal, Bridgman, and other complicated temperature profies in the sample. Finally, an example is given to show how the algorithm can be used to change the desired profile with time according to a prescribed temperature-time evolution.
Duignan, Timothy T; Parsons, Drew F; Ninham, Barry W
2013-08-15
Physically accurate continuum solvent models that can calculate solvation energies are crucial to explain and predict the behavior of solute particles in water. Here, we present such a model applied to small spherical ions and neutral atoms. It improves upon a basic Born electrostatic model by including a standard cavity energy and adding a dispersion component, consistent with the Born electrostatic energy and using the same cavity size parameter. We show that the well-known, puzzling differences between the solvation energies of ions of the same size is attributable to the neglected dispersion contribution. This depends on dynamic polarizability as well as size. Generally, a large cancellation exists between the cavity and dispersion contributions. This explains the surprising success of the Born model. The model accurately reproduces the solvation energies of the alkali halide ions, as well as the silver(I) and copper(I) ions with an error of 12 kJ mol(-1) (±3%). The solvation energy of the noble gases is also reproduced with an error of 2.6 kJ mol(-1) (±30%). No arbitrary fitting parameters are needed to achieve this. This model significantly improves our understanding of ionic solvation and forms a solid basis for the investigation of other ion-specific effects using a continuum solvent model.
Model for resistance evolution in shape memory alloys including R-phase
Brammajyosula, Ravindra; Buravalla, Vidyashankar; Khandelwal, Ashish
2011-03-01
The electrical resistance behavior of a shape memory alloy (SMA) wire can be used for sensing the state of an SMA device. Hence, this study investigates the resistance evolution in SMAs. A lumped parameter model with cosine kinetics to capture the resistance variation during the phase transformation is developed. Several SMA materials show the presence of trigonal or rhombohedral (R) phase as an intermediate phase, apart from the commonly recognized austenite and martensite phases. Most of the SMA models ignore the R-phase effect in their prediction of thermomechanical response. This may be acceptable since the changes in thermomechanical response associated with the R-phase are relatively less. However, the resistivity related effects are pronounced in the presence of the R-phase and its appearance introduces non-monotonicity in the resistivity evolution. This leads to additional complexities in the use of resistance signal for sensing and control. Hence, a lumped model is developed here for resistance evolution including the R-phase effects. A phase-diagram-based model is proposed for predicting electro-thermomechanical response. Both steady state hysteretic response and transient response are modeled. The model predictions are compared with the available test data. Numerical studies have shown that the model is able to capture all the essential features of the resistance evolution in SMAs in the presence of the R-phase.
Directory of Open Access Journals (Sweden)
Hyein Lim
2013-01-01
Full Text Available Spin-torque oscillator (STO is a promising new technology for the future RF oscillators, which is based on the spin-transfer torque (STT effect in magnetic multilayered nanostructure. It is expected to provide a larger tunability, smaller size, lower power consumption, and higher level of integration than the semiconductor-based oscillators. In our previous work, a circuit-level model of the giant magnetoresistance (GMR STO was proposed. In this paper, we present a physics-based circuit-level model of the magnetic tunnel junction (MTJ-based STO. MTJ-STO model includes the effect of perpendicular torque that has been ignored in the GMR-STO model. The variations of three major characteristics, generation frequency, mean oscillation power, and generation linewidth of an MTJ-STO with respect to the amount of perpendicular torque, are investigated, and the results are applied to our model. The operation of the model was verified by HSPICE simulation, and the results show an excellent agreement with the experimental data. The results also prove that a full circuit-level simulation with MJT-STO devices can be made with our proposed model.
Buckley, Lauren B; Waaser, Stephanie A; MacLean, Heidi J; Fox, Richard
2011-12-01
Thermal constraints on development are often invoked to predict insect distributions. These constraints tend to be characterized in species distribution models (SDMs) by calculating development time based on a constant lower development temperature (LDT). Here, we assessed whether species-specific estimates of LDT based on laboratory experiments can improve the ability of SDMs to predict the distribution shifts of six U.K. butterflies in response to recent climate warming. We find that species-specific and constant (5 degrees C) LDT degree-day models perform similarly at predicting distributions during the period of 1970-1982. However, when the models for the 1970-1982 period are projected to predict distributions in 1995-1999 and 2000-2004, species-specific LDT degree-day models modestly outperform constant LDT degree-day models. Our results suggest that, while including species-specific physiology in correlative models may enhance predictions of species' distribution responses to climate change, more detailed models may be needed to adequately account for interspecific physiological differences.
Including source uncertainty and prior information in the analysis of stable isotope mixing models.
Ward, Eric J; Semmens, Brice X; Schindler, Daniel E
2010-06-15
Stable isotope mixing models offer a statistical framework for estimating the contribution of multiple sources (such as prey) to a mixture distribution. Recent advances in these models have estimated the source proportions using Bayesian methods, but have not explicitly accounted for uncertainty in the mean and variance of sources. We demonstrate that treating these quantities as unknown parameters can reduce bias in the estimated source contributions, although model complexity is increased (thereby increasing the variance of estimates). The advantages of this fully Bayesian approach are particularly apparent when the source geometry is poor or sample sizes are small. A second benefit to treating source quantities as parameters is that prior source information can be included. We present findings from 9 lake food-webs, where the consumer of interest (fish) has a diet composed of 5 sources: aquatic insects, snails, zooplankton, amphipods, and terrestrial insects. We compared the traditional Bayesian stable isotope mixing model with fixed source parameters to our fully Bayesian model-with and without an informative prior. The informative prior has much less impact than the choice of model-the traditional mixing model with fixed source parameters estimates the diet to be dominated by aquatic insects, while the fully Bayesian model estimates the diet to be more balanced but with greater importance of zooplankton. The findings from this example demonstrate that there can be stark differences in inference between the two model approaches, particularly when the source geometry of the mixing model is poor. These analyses also emphasize the importance of investing substantial effort toward characterizing the variation in the isotopic characteristics of source pools to appropriately quantify uncertainties in their contributions to consumers in food webs.
Henkel, Marius; Schmidberger, Anke; Vogelbacher, Markus; Kühnert, Christian; Beuker, Janina; Bernard, Thomas; Schwartz, Thomas; Syldatk, Christoph; Hausmann, Rudolf
2014-08-01
The production of rhamnolipid biosurfactants by Pseudomonas aeruginosa is under complex control of a quorum sensing-dependent regulatory network. Due to a lack of understanding of the kinetics applicable to the process and relevant interrelations of variables, current processes for rhamnolipid production are based on heuristic approaches. To systematically establish a knowledge-based process for rhamnolipid production, a deeper understanding of the time-course and coupling of process variables is required. By combining reaction kinetics, stoichiometry, and experimental data, a process model for rhamnolipid production with P. aeruginosa PAO1 on sunflower oil was developed as a system of coupled ordinary differential equations (ODEs). In addition, cell density-based quorum sensing dynamics were included in the model. The model comprises a total of 36 parameters, 14 of which are yield coefficients and 7 of which are substrate affinity and inhibition constants. Of all 36 parameters, 30 were derived from dedicated experimental results, literature, and databases and 6 of them were used as fitting parameters. The model is able to describe data on biomass growth, substrates, and products obtained from a reference batch process and other validation scenarios. The model presented describes the time-course and interrelation of biomass, relevant substrates, and products on a process level while including a kinetic representation of cell density-dependent regulatory mechanisms.
Codigestion of solid wastes: a review of its uses and perspectives including modeling.
Mata-Alvarez, Joan; Dosta, Joan; Macé, Sandra; Astals, Sergi
2011-06-01
The last two years have witnessed a dramatic increase in the number of papers published on the subject of codigestion, highlighting the relevance of this topic within anaerobic digestion research. Consequently, it seems appropriate to undertake a review of codigestion practices starting from the late 1970s, when the first papers related to this concept were published, and continuing to the present day, demonstrating the exponential growth in the interest shown in this approach in recent years. Following a general analysis of the situation, state-of-the-art codigestion is described, focusing on the two most important areas as regards publication: codigestion involving sewage sludge and the organic fraction of municipal solid waste (including a review of the secondary advantages for wastewater treatment plant related to biological nutrient removal), and codigestion in the agricultural sector, that is, including agricultural - farm wastes, and energy crops. Within these areas, a large number of oversized digesters appear which can be used to codigest other substrates, resulting in economic and environmental advantages. Although the situation may be changing, there is still a need for good examples on an industrial scale, particularly with regard to wastewater treatment plants, in order to extend this beneficial practice. In the last section, a detailed analysis of papers addressing the important aspect of modelisation is included. This analysis includes the first codigestion models to be developed as well as recent applications of the standardised anaerobic digestion model ADM1 to codigestion. (This review includes studies ranging from laboratory to industrial scale.).
Enhanced UWB Radio Channel Model for Short-Range Communication Scenarios Including User Dynamics
DEFF Research Database (Denmark)
Kovacs, Istvan Zsolt; Nguyen, Tuan Hung; Eggers, Patrick Claus F.
2005-01-01
In this paper we propose a SISO UWB radio channel model for short-range radio link scenarios between a fixed device and a dynamic user hand-held device. The channel model is derived based on novel experimental UWB radio propagation investigations carried out in typical indoor PAN scenarios...... including realistic device and user terminal antenna configurations. The radio channel measurements have been performed in the lower UWB frequency band of 3GHz to 5GHz with a 2x4 MIMO antenna configuration. Several environments, user scenarios and two types of user terminals have been used. The developed...
Directory of Open Access Journals (Sweden)
Hossein Sadegh Lafmejani
2015-09-01
Full Text Available Fuzzy logic controller (FLC is a heuristic method by If-Then Rules which resembles human intelligence and it is a good method for designing Non-linear control systems. In this paper, an arbitrary helicopter model includes articulated manipulators has been simulated with Matlab SimMechanics toolbox. Due to the difficulties of modeling this complex system, a fuzzy controller with simple fuzzy rules has been designed for its yaw and roll angles in order to stabilize the helicopter while it is in the presence of disturbances or its manipulators are moving for a task. Results reveal that a simple FLC can appropriately control this system.
Including Finite Surface Span Effects in Empirical Jet-Surface Interaction Noise Models
Brown, Clifford A.
2016-01-01
The effect of finite span on the jet-surface interaction noise source and the jet mixing noise shielding and reflection effects is considered using recently acquired experimental data. First, the experimental setup and resulting data are presented with particular attention to the role of surface span on far-field noise. These effects are then included in existing empirical models that have previously assumed that all surfaces are semi-infinite. This extended abstract briefly describes the experimental setup and data leaving the empirical modeling aspects for the final paper.
Fuller, C. R.
1986-01-01
A simplified analytical model of transmission of noise into the interior of propeller-driven aircraft has been developed. The analysis includes directivity and relative phase effects of the propeller noise sources, and leads to a closed form solution for the coupled motion between the interior and exterior fields via the shell (fuselage) vibrational response. Various situations commonly encountered in considering sound transmission into aircraft fuselages are investigated analytically and the results obtained are compared to measurements in real aircraft. In general the model has proved successful in identifying basic mechanisms behind noise transmission phenomena.
Modeling of a Single Multimode Fiber Imaging System
Liu, Chen; Liu, Deming; Su, Lei
2016-01-01
We present a detailed theoretical analysis on image transmission via a single multimode fiber (MMF). A single MMF imaging model is developed to study the light wave propagation from the light source to the camera, by using free-space Fourier optics theory and mode-coupling theory. A mathematical expression is obtained for the complete single MMF imaging system, which is further validated by image-transmission simulations. Our model is believed to be the first theoretical model to describe the complete MMF imaging system based on the transmission of individual modes. Therefore, this model is robust and capable of analyzing MMF image transmission under specific mode-coupling conditions. We use our model to study bending-induced image blur in single-MMF image transmission, and the result has found a good agreement with that of existing experimental studies. These should provide important insights into future MMF imaging system developments.
Memory of the Vernalized State in Plants including the Model Grass Brachypodium distachyon
Directory of Open Access Journals (Sweden)
Daniel P Woods
2014-03-01
Full Text Available Plant species that have a vernalization requirement exhibit variation in the ability to remember winter—i.e., variation in the stability of the vernalized state. Studies in Arabidopsis have demonstrated that molecular memory involves changes in the chromatin state and expression of the flowering repressor FLOWERING LOCUS C, and have revealed that single-gene differences can have large effects on the stability of the vernalized state. In the perennial Arabidopsis relative Arabis alpina, the lack of memory of winter is critical for its perennial life history. Our studies of flowering behavior in the model grass Brachypodium distachyon reveal extensive variation in the vernalization requirement, and studies of a particular Brachypodium accession that has a qualitative requirement for both cold exposure and inductive daylength reveals that Brachypodium can exhibit a highly stable vernalized state.
An air/sea flux model including the effects of capillary waves
Bourassa, Mark A.
1993-01-01
An improved model of the air/sea interface is developed. The improvements consist in including the effect of capillary (surface tension) waves on the tropical surface fluxes and the consideration of the sea state, both of which increase the magnitude of tropical surface fluxes. Changes in surface stress are most significant in the low wind-speed regions, which include the areas where westerly bursts occur. It is shown that the changes, from the regular wind conditions to those of a westerly burst or El-Nino, can double when the effects of capillary waves are considered. This implies a much stronger coupling between the ocean and the atmosphere than is predicted by other boundary layer models.
A complete model of CH+ rotational excitation including radiative and chemical pumping processes
Godard, Benjamin
2012-01-01
Aims. Excitation of far-infrared and submillimetric molecular lines may originate from nonreactive collisions, chemical formation, or far infrared, near-infrared, and optical fluorescences. As a template, we investigate the impact of each of these processes on the excitation of the methylidyne cation CH+ and on the intensities of its rotational transitions recently detected in emission in dense photodissociation regions (PDRs) and in planetary nebulae. Methods. We have developed a nonlocal thermodynamic equilibrium (non-LTE) excitation model that includes the entire energy structure of CH+, i.e. taking into account the pumping of its vibrational and bound and unbound electronic states by near-infrared and optical photons. The model includes the theoretical cross-sections of nonreactive collisions with H, H2, He, and e-, and a Boltzmann distribution is used to describe the probability of populating the excited levels of CH+ during its chemical formation by hydrogenation of C+. To confirm our results we also pe...
Including Flocculation in a Numerical Sediment Transport Model for a Partially-Mixed Estuary
Tarpley, D.; Harris, C. K.; Friedrichs, C. T.
2016-12-01
Particle settling velocity impacts the transport of suspended sediment to the first order but fine-grained material like muds tend to form loosely bound aggregates (flocs) whose settling velocity can vary widely. Properties of flocculated sediment such as settling velocity and particle density are difficult to predict because they change in response to several factors including salinity, suspended sediment concentration, turbulent mixing, and organic content. Knowledge of the mechanisms governing flocculation of cohesive sediment is rapidly expanding; especially in response to recent technical advances. As the understanding of particle dynamics progresses, numerical models describing flocculation and break-up are being developed with varying degrees of complexity. While complex models capture the dynamics of the system, their computational costs may prohibit their incorporation into larger model domains. It is important to determine if the computational costs of intricate floc models are justifiable compared to simpler formulations. For this study, we implement an idealized two-dimensional model designed to represent a longitudinal section of a partially mixed estuary that neglects across-channel variation but exhibits salinity driven estuarine circulation. The idealized domain is designed to mimic the primary features of the York River, VA. Suspended load, erosion and deposition are calculated within the sediment transport routines of the COAWST modeling system. We compare different methods for prescribing settling velocity of fine-grained material. The simplest, standard model neglects flocculation dynamics while the complex treatment is a size-class-based flocculation model (FLOCMOD). Differences in tidal and daily averages of suspended load, bulk settling velocity and bed deposition are compared between the standard and FLOCMOD runs, to examine the relative impact of flocculation on sediment transport patterns. We expect FLOCMOD to have greater variability and
Bongers, Mathilda L; de Ruysscher, Dirk; Oberije, Cary; Lambin, Philippe; Uyl-de Groot, Carin A; Coupé, V M H
2016-01-01
With the shift toward individualized treatment, cost-effectiveness models need to incorporate patient and tumor characteristics that may be relevant to treatment planning. In this study, we used multistate statistical modeling to inform a microsimulation model for cost-effectiveness analysis of individualized radiotherapy in lung cancer. The model tracks clinical events over time and takes patient and tumor features into account. Four clinical states were included in the model: alive without progression, local recurrence, metastasis, and death. Individual patients were simulated by repeatedly sampling a patient profile, consisting of patient and tumor characteristics. The transitioning of patients between the health states is governed by personalized time-dependent hazard rates, which were obtained from multistate statistical modeling (MSSM). The model simulations for both the individualized and conventional radiotherapy strategies demonstrated internal and external validity. Therefore, MSSM is a useful technique for obtaining the correlated individualized transition rates that are required for the quantification of a microsimulation model. Moreover, we have used the hazard ratios, their 95% confidence intervals, and their covariance to quantify the parameter uncertainty of the model in a correlated way. The obtained model will be used to evaluate the cost-effectiveness of individualized radiotherapy treatment planning, including the uncertainty of input parameters. We discuss the model-building process and the strengths and weaknesses of using MSSM in a microsimulation model for individualized radiotherapy in lung cancer.
Energy Technology Data Exchange (ETDEWEB)
NONE
1995-12-01
Several safety reports will be produced in the process of planning and constructing the system for disposal of high-level radioactive waste in Sweden. The present report gives a model, with detailed examples, of how these reports should be organized and what steps they should include. In the near future safety reports will deal with the encapsulation plant and the repository. Later reports will treat operation of the handling systems and the repository.
CSIR Research Space (South Africa)
Cooper, Antony K
2011-07-01
Full Text Available an aggregator of VGI, such as Ushahidi, and the provider of the infrastructure for collecting VGI, such as OpenStreetMap. 3) Broker: A stakeholder who brings End Users and Providers together and assists in the negotiation of contracts between them... model of a spatial data infrastructure to include volunteered geographical information Antony K Cooper*, Petr Rapant?, Jan Hjelmager?, Dominique Laurent?, Adam Iwaniak#, Serena Coetzee$, Harold Moellering? and Ulrich D?ren? *Logistics...
Directory of Open Access Journals (Sweden)
Giuseppina Massini
2009-11-01
Full Text Available
Chemotherapy including high-dose methotrexate (HD-MTX, with or without radiotherapy, is standard treatment for primary cerebral nervous system lymphoma (PCNSL. It remains controversial whether addition of other drugs will add to therapeutic efficacy. We report here on 41 patients with PCNSL treated using a combined treatment modality, including HD-MTX (3.5 g/m^{2} for 2 cycles prior to whole brain radiotherapy (WBRT. In 22 patients, the chemotherapy was intensified by adding high-dose cytosine arabinoside (HD-AraC (2g/m^{2} for 4 doses for 2 cycles. Complete remission was obtained in 23 of 34 assessable patients (67%, and overall and disease-free survival rates were 24% and 46%, respectively, without differences between treatment groups. The addition of HD-AraC was complicated by severe infections in 17/22 (77% patients, resulting in 3 toxic deaths. Our study indicates that addition of HD-AraC may not improve clinical outcome in PCNSL, while it increases toxicity. More targeted and less toxic therapies are warranted.
QCD Equation of State From a Chiral Hadronic Model Including Quark Degrees of Freedom
Rau, Philip; Schramm, Stefan; Stöcker, Horst
2013-01-01
This work presents an effective model for strongly interacting matter and the QCD equation of state (EoS). The model includes both hadron and quark degrees of freedom and takes into account the transition of chiral symmetry restoration as well as the deconfinement phase transition. At low temperatures $T$ and baryonic densities $\\rho_B$ a hadron resonance gas is described using a SU(3)-flavor sigma-omega model and a quark phase is introduced in analogy to PNJL models for higher $T$ and $\\rho_B$. In this way, the correct asymptotic degrees of freedom are used in a wide range of $T$ and $\\rho_B$. Here, results of this model concerning the chiral and deconfinement phase transitions and thermodynamic model properties are presented. Large hadron resonance multiplicities in the transition region emphasize the importance of heavy-mass resonance states in this region and their impact on the chiral transition behavior. The resulting phase diagram of QCD matter at small chemical potentials is in line with latest lattic...
A full model for simulation of electrochemical cells including complex behavior
Esperilla, J. J.; Félez, J.; Romero, G.; Carretero, A.
This communication presents a model of electrochemical cells developed in order to simulate their electrical, chemical and thermal behavior showing the differences when thermal effects are or not considered in the charge-discharge process. The work presented here has been applied to the particular case of the Pb,PbSO 4|H 2SO 4 (aq)|PbO 2,Pb cell, which forms the basis of the lead-acid batteries so widely used in the automotive industry and as traction batteries in electric or hybrid vehicles. Each half-cell is considered independently in the model. For each half-cell, in addition to the main electrode reaction, a secondary reaction is considered: the hydrogen evolution reaction in the negative electrode and the oxygen evolution reaction in the positive. The equilibrium potential is calculated with the Nernst equation, in which the activity coefficients are fitted to an exponential function using experimental data. On the other hand, the two main mechanisms that produce the overpotential are considered, that is the activation or charge transfer and the diffusion mechanisms. First, an isothermal model has been studied in order to show the behavior of the main phenomena. A more complex model has also been studied including thermal behavior. This model is very useful in the case of traction batteries in electric and hybrid vehicles where high current intensities appear. Some simulation results are also presented in order to show the accuracy of the proposed models.
Validation of noise models for single-cell transcriptomics
Grün, Dominic; Kester, Lennart; van Oudenaarden, Alexander
2014-01-01
Single-cell transcriptomics has recently emerged as a powerful technology to explore gene expression heterogeneity among single cells. Here we identify two major sources of technical variability: sampling noise and global cell-to-cell variation in sequencing efficiency. We propose noise models to co
Modelling a singly resonant, intracavity ring optical parametric oscillator
DEFF Research Database (Denmark)
Buchhave, Preben; Tidemand-Lichtenberg, Peter; Wei, Hou;
2003-01-01
We study theoretically and experimentally the dynamics of a single-frequency, unidirectional ring laser with an intracavity nonlinear singly resonant OPO-crystal in a coupled resonator. We find for a range of operating conditions good agreement between model results and measurements of the laser ...
Single top production in a non-minimal supersymmetric model
Herquet, M.; Knegjens, R.; Laenen, E.L.M.P.
2010-01-01
We study single top production at the LHC in a SUSY-QCD model with a heavy Dirac gluino. The presence of a heavy Dirac gluino allows for notable top-up flavour changing neutral currents. In this scenario, we find that the process ug->tg gives the largest contribution to single top production via FCN
Single top production in a non-minimal supersymmetric model
Herquet, M.; Knegjens, R.; Laenen, E.
2010-01-01
We study single top production at the LHC in a SUSY-QCD model with a heavy Dirac gluino. The presence of a heavy Dirac gluino allows for notable top-up flavour changing neutral currents. In this scenario, we find that the process ug→tg gives the largest contribution to single top production via FCNC
A 3D model of the oculomotor plant including the pulley system
Energy Technology Data Exchange (ETDEWEB)
Viegener, A; Armentano, R L [Fundacion Universitaria Dr. Rene G. Favaloro, SolIs 453 (1078) Buenos Aires (Argentina)
2007-11-15
Early models of the oculomotor plant only considered the eye globes and the muscles that move them. Recently, connective tissue structures have been found enveloping the extraocular muscles (EOMs) and firmly anchored to the orbital wall. These structures act as pulleys; they determine the functional origin of the EOMs and, in consequence, their effective pulling direction. A three dimensional model of the oculomotor plant, including pulleys, has been developed and simulations in Simulink were performed during saccadic eye movements. Listing's law was implemented based on the supposition that there exists an eye orientation related signal. The inclusion of the pulleys in the model makes this assumption plausible and simplifies the problem of the plant noncommutativity.
A flexible and qualitatively stable model for cell cycle dynamics including DNA damage effects.
Jeffries, Clark D; Johnson, Charles R; Zhou, Tong; Simpson, Dennis A; Kaufmann, William K
2012-01-01
This paper includes a conceptual framework for cell cycle modeling into which the experimenter can map observed data and evaluate mechanisms of cell cycle control. The basic model exhibits qualitative stability, meaning that regardless of magnitudes of system parameters its instances are guaranteed to be stable in the sense that all feasible trajectories converge to a certain trajectory. Qualitative stability can also be described by the signs of real parts of eigenvalues of the system matrix. On the biological side, the resulting model can be tuned to approximate experimental data pertaining to human fibroblast cell lines treated with ionizing radiation, with or without disabled DNA damage checkpoints. Together these properties validate a fundamental, first order systems view of cell dynamics. Classification Codes: 15A68.
RELAP5-3D Code Includes Athena Features and Models
Energy Technology Data Exchange (ETDEWEB)
Richard A. Riemke; Cliff B. Davis; Richard R. Schultz
2006-07-01
Version 2.3 of the RELAP5-3D computer program includes all features and models previously available only in the ATHENA version of the code. These include the addition of new working fluids (i.e., ammonia, blood, carbon dioxide, glycerol, helium, hydrogen, lead-bismuth, lithium, lithium-lead, nitrogen, potassium, sodium, and sodium-potassium) and a magnetohydrodynamic model that expands the capability of the code to model many more thermal-hydraulic systems. In addition to the new working fluids along with the standard working fluid water, one or more noncondensable gases (e.g., air, argon, carbon dioxide, carbon monoxide, helium, hydrogen, krypton, nitrogen, oxygen, sf6, xenon) can be specified as part of the vapor/gas phase of the working fluid. These noncondensable gases were in previous versions of RELAP5- 3D. Recently four molten salts have been added as working fluids to RELAP5-3D Version 2.4, which has had limited release. These molten salts will be in RELAP5-3D Version 2.5, which will have a general release like RELAP5-3D Version 2.3. Applications that use these new features and models are discussed in this paper.
Ionospheric correction for spaceborne single-frequency GPS based on single layer model
Indian Academy of Sciences (India)
Xia Yang; Jiancheng Li; Shoujian Zhang
2014-06-01
A modified ionospheric correction method and the corresponding approximate algorithm for spaceborne single-frequency Global Positioning System (GPS) users are proposed in this study. Single Layer Model (SLM) mapping function for spaceborne GPS was analyzed. SLM mapping functions at different altitudes were calculated. Ionospheric Pierce Point (IPP) trajectories of the dlft station (an IGS station located at the longitude of 4° 23′ 15.22′′E and the latitude of 51° 59′ 9.63′′N, in the TU Delft University, The Netherlands) and the GRACE satellite were computed with the corresponding single layer height of 350 and 500 km, respectively. The Klobuchar model was used to compute ionospheric delays for the dlft station, and modified Klobuchar model, together with scale factors, was used to compute the fractional ionospheric corrections above the GRACE altitudes. Calculation results were validated using dual-frequency observations. The study shows that the single layer height needs to be changed from 350 to 500 km according to the altitude of GRACE. Approximate forms of Earth angle and slant factor developed for modified Klobuchar model are applicable to GRACE, with accuracy adequate to preserve the essential elements required to compute ionospheric delays. Results show that the Klobuchar model is effective for ground GPS, and the modified Klobuchar model corrects more than 80% on average of the ionospheric delays for spaceborne single-frequency GPS.
Including policy and management in socio-hydrology models: initial conceptualizations
Hermans, Leon; Korbee, Dorien
2017-04-01
Socio-hydrology studies the interactions in coupled human-water systems. So far, the use of dynamic models that capture the direct feedback between societal and hydrological systems has been dominant. What has not yet been included with any particular emphasis, is the policy or management layer, which is a central element in for instance integrated water resources management (IWRM) or adaptive delta management (ADM). Studying the direct interactions between human-water systems generates knowledges that eventually helps influence these interactions in ways that may ensure better outcomes - for society and for the health and sustainability of water systems. This influence sometimes occurs through spontaneous emergence, uncoordinated by societal agents - private sector, citizens, consumers, water users. However, the term 'management' in IWRM and ADM also implies an additional coordinated attempt through various public actors. This contribution is a call to include the policy and management dimension more prominently into the research focus of the socio-hydrology field, and offers first conceptual variables that should be considered in attempts to include this policy or management layer in socio-hydrology models. This is done by drawing on existing frameworks to study policy processes throughout both planning and implementation phases. These include frameworks such as the advocacy coalition framework, collective learning and policy arrangements, which all emphasis longer-term dynamics and feedbacks between actor coalitions in strategic planning and implementation processes. A case about longter-term dynamics in the management of the Haringvliet in the Netherlands is used to illustrate the paper.
EXACT SOLUTIONS FOR NONLINEAR TRANSIENT FLOW MODEL INCLUDING A QUADRATIC GRADIENT TERM
Institute of Scientific and Technical Information of China (English)
曹绪龙; 同登科; 王瑞和
2004-01-01
The models of the nonlinear radial flow for the infinite and finite reservoirs including a quadratic gradient term were presented. The exact solution was given in real space for flow equation including quadratic gradiet term for both constant-rate and constant pressure production cases in an infinite system by using generalized Weber transform. Analytical solutions for flow equation including quadratic gradient term were also obtained by using the Hankel transform for a finite circular reservoir case. Both closed and constant pressure outer boundary conditions are considered. Moreover, both constant rate and constant pressure inner boundary conditions are considered. The difference between the nonlinear pressure solution and linear pressure solution is analyzed. The difference may be reached about 8% in the long time. The effect of the quadratic gradient term in the large time well test is considered.
Modeling of calcination of single kaolinitic clay particle
DEFF Research Database (Denmark)
Gebremariam, Abraham Teklay; Yin, Chungen; Rosendahl, Lasse
The present work aims at modeling of the calcination (dehydroxylation) process of clay particles, specifically kaolinite, and its thermal transformation. For such purpose, 1D single particle calcination model was developed based on the concept of shrinking core model to assess the dehydroxylation...
Modeling of calcination of single kaolinitic clay particle
DEFF Research Database (Denmark)
Gebremariam, Abraham Teklay; Yin, Chungen; Rosendahl, Lasse
The present work aims at modeling of the calcination (dehydroxylation) process of clay particles, specifically kaolinite, and its thermal transformation. For such purpose, 1D single particle calcination model was developed based on the concept of shrinking core model to assess the dehydroxylation...
Brouwers, Jos; Augustijn, Dionysius C.M.
2001-01-01
In this paper a simple analytical model is presented for the one-dimensional transport equation describing the removal of a uniformly distributed, single-component NAPL under nonequilibrium conditions. Both advective and dispersive transport are included in the model. The model describes two
A single product perishing inventory model with demand interaction ...
African Journals Online (AJOL)
A single product perishing inventory model with demand interaction. ... satisfied may be satisfied by an item in Phase II, based on a probability measure. ... the probability distribution of the inventory level at any arbitrary point in time is obtained.
GLOBAL ATTRACTIVITY IN A PERIODIC DELAY SINGLE SPECIES MODEL
Institute of Scientific and Technical Information of China (English)
无
2000-01-01
In this paper, we establish the existence of a positive periodic solution for a periodic delay single species population growth model, and obtain sufficient conditions for the periodic solution to be globally attractive.
The evolution of massive stars including mass loss - Presupernova models and explosion
Woosley, S. E.; Langer, Norbert; Weaver, Thomas A.
1993-01-01
The evolution of massive stars of 35, 40, 60, and 85 solar masses is followed through all stages of nuclear burning to the point of Fe core collapse. Critical nuclear reaction and mass-loss rates are varied. Efficient mass loss during the Wolf-Rayet (WR) stage is likely to lead to final masses as small as 4 solar masses. For a reasonable parameterization of the mass loss, there may be convergence of all WR stars, both single and in binaries, to a narrow band of small final masses. Our representative model, a 4.25 solar-mass WR presupernova derived from a 60 solar mass star, is followed through a simulated explosion, and its explosive nucleosynthesis and light curve are determined. Its properties are similar to those observed in Type Ib supernovae. The effects of the initial mass and mass loss on the presupernova structure of small mass WR models is also explored. Important properties of the presupernova star and its explosion can only be obtained by following the complete evolution starting on the main sequence.
On the modelling of semi-insulating GaAs including surface tension and bulk stresses
Energy Technology Data Exchange (ETDEWEB)
Dreyer, W.; Duderstadt, F.
2004-07-01
Necessary heat treatment of single crystal semi-insulating Gallium Arsenide (GaAs), which is deployed in micro- and opto- electronic devices, generate undesirable liquid precipitates in the solid phase. The appearance of precipitates is influenced by surface tension at the liquid/solid interface and deviatoric stresses in the solid. The central quantity for the description of the various aspects of phase transitions is the chemical potential, which can be additively decomposed into a chemical and a mechanical part. In particular the calculation of the mechanical part of the chemical potential is of crucial importance. We determine the chemical potential in the framework of the St. Venant-Kirchhoff law which gives an appropriate stress/strain relation for many solids in the small strain regime. We establish criteria, which allow the correct replacement of the St. Venant-Kirchhoff law by the simpler Hooke law. The main objectives of this study are: (i) We develop a thermo-mechanical model that describes diffusion and interface motion, which both are strongly influenced by surface tension effects and deviatoric stresses. (ii) We give an overview and outlook on problems that can be posed and solved within the framework of the model. (iii) We calculate non-standard phase diagrams, i.e. those that take into account surface tension and non-deviatoric stresses, for GaAs above 786 C, and we compare the results with classical phase diagrams without these phenomena. (orig.)
Energy Technology Data Exchange (ETDEWEB)
Mansoori, Zohreh; Saffar-Avval, Majid; Basirat-Tabrizi, Hassan; Ahmadi, Goodarz; Lain, Santiago
2002-12-01
A thermo-mechanical turbulence model is developed and used for predicting heat transfer in a gas-solid flow through a vertical pipe with constant wall heat flux. The new four-way interaction model makes use of the thermal k{sub {theta}}-{tau}{sub {theta}} equations, in addition to the hydrodynamic k-{tau} transport, and accounts for the particle-particle and particle-wall collisions through a Eulerian/Lagrangian formulation. The simulation results indicate that the level of thermal turbulence intensity and the heat transfer are strongly affected by the particle collisions. Inter-particle collisions attenuate the thermal turbulence intensity near the wall but somewhat amplify the temperature fluctuations in the pipe core region. The hydrodynamic-to-thermal times-scale ratio and the turbulent Prandtl number in the region near the wall increase due to the inter-particle collisions. The results also show that the use of a constant or the single-phase gas turbulent Prandtl number produces error in the thermal eddy diffusivity and thermal turbulent intensity fields. Simulation results also indicate that the inter-particle contact heat conduction during collision has no significant effect in the range of Reynolds number and particle diameter studied.
The evolution of massive stars including mass loss - Presupernova models and explosion
Woosley, S. E.; Langer, Norbert; Weaver, Thomas A.
1993-01-01
The evolution of massive stars of 35, 40, 60, and 85 solar masses is followed through all stages of nuclear burning to the point of Fe core collapse. Critical nuclear reaction and mass-loss rates are varied. Efficient mass loss during the Wolf-Rayet (WR) stage is likely to lead to final masses as small as 4 solar masses. For a reasonable parameterization of the mass loss, there may be convergence of all WR stars, both single and in binaries, to a narrow band of small final masses. Our representative model, a 4.25 solar-mass WR presupernova derived from a 60 solar mass star, is followed through a simulated explosion, and its explosive nucleosynthesis and light curve are determined. Its properties are similar to those observed in Type Ib supernovae. The effects of the initial mass and mass loss on the presupernova structure of small mass WR models is also explored. Important properties of the presupernova star and its explosion can only be obtained by following the complete evolution starting on the main sequence.
Usmanov, Arcadi V.; Goldstein, Melvyn L.; Matthaeus, William H.
2012-01-01
To study the effects of interstellar pickup protons and turbulence on the structure and dynamics of the solar wind, we have developed a fully three-dimensional magnetohydrodynamic solar wind model that treats interstellar pickup protons as a separate fluid and incorporates the transport of turbulence and turbulent heating. The governing system of equations combines the mean-field equations for the solar wind plasma, magnetic field, and pickup protons and the turbulence transport equations for the turbulent energy, normalized cross-helicity, and correlation length. The model equations account for photoionization of interstellar hydrogen atoms and their charge exchange with solar wind protons, energy transfer from pickup protons to solar wind protons, and plasma heating by turbulent dissipation. Separate mass and energy equations are used for the solar wind and pickup protons, though a single momentum equation is employed under the assumption that the pickup protons are comoving with the solar wind protons.We compute the global structure of the solar wind plasma, magnetic field, and turbulence in the region from 0.3 to 100 AU for a source magnetic dipole on the Sun tilted by 0 deg - .90 deg and compare our results with Voyager 2 observations. The results computed with and without pickup protons are superposed to evaluate quantitatively the deceleration and heating effects of pickup protons, the overall compression of the magnetic field in the outer heliosphere caused by deceleration, and the weakening of corotating interaction regions by the thermal pressure of pickup protons.
Perceptual-center modeling is affected by including acoustic rate-of-change modulations.
Harsin, C A
1997-02-01
This study investigated the acoustic correlates of perceptual centers (p-centers) in CV and VC syllables and developed an acoustic p-center model. In Part 1, listeners located syllables' p-centers by a method-of-adjustment procedure. The CV syllables contained the consonants /s/,/r/,/n/,/t/,/d/,/k/, and /g/; the VCs, the consonants /s/,/r/, and /n/. The vowel in all syllables was /a/. The results of this experiment replicated and extended previous findings regarding the effects of phonetic variation on p-centers. In Part 2, a digital signal processing procedure was used to acoustically model p-center perception. Each stimulus was passed through a six-band digital filter, and the outputs were processed to derive low-frequency modulation components. These components were weighted according to a perceived modulation magnitude function and recombined to create six psychoacoustic envelopes containing modulation energies from 3 to 47 Hz. In this analysis, p-centers were found to be highly correlated with the time-weighted function of the rate-of-change in the psychoacoustic envelopes, multiplied by the psychoacoustic envelope magnitude increment. The results were interpreted as suggesting (1) the probable role of low-frequency energy modulations in p-center perception, and (2) the presence of perceptual processes that integrate multiple articulatory events into a single syllabic event.
SPheno 3.1: extensions including flavour, CP-phases and models beyond the MSSM
Porod, W.; Staub, F.
2012-11-01
We describe recent extensions of the program SPhenoincluding flavour aspects, CP-phases, R-parity violation and low energy observables. In case of flavour mixing all masses of supersymmetric particles are calculated including the complete flavour structure and all possible CP-phases at the 1-loop level. We give details on implemented seesaw models, low energy observables and the corresponding extension of the SUSY Les Houches Accord. Moreover, we comment on the possibilities to include MSSM extensions in SPheno. Catalogue identifier: ADRV_v2_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/ADRV_v2_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 154062 No. of bytes in distributed program, including test data, etc.: 1336037 Distribution format: tar.gz Programming language: Fortran95. Computer: PC running under Linux, should run in every Unix environment. Operating system: Linux, Unix. Classification: 11.6. Catalogue identifier of previous version: ADRV_v1_0 Journal reference of previous version: Comput. Phys. Comm. 153(2003)275 Does the new version supersede the previous version?: Yes Nature of problem: The first issue is the determination of the masses and couplings of supersymmetric particles in various supersymmetric models, the R-parity conserved MSSM with generation mixing and including CP-violating phases, various seesaw extensions of the MSSM and the MSSM with bilinear R-parity breaking. Low energy data on Standard Model fermion masses, gauge couplings and electroweak gauge boson masses serve as constraints. Radiative corrections from supersymmetric particles to these inputs must be calculated. Theoretical constraints on the soft SUSY breaking parameters from a high scale theory are imposed and the parameters at the electroweak scale are obtained from the
Venetsanos, A G; Bartzis, J G; Würtz, J; Papailiou, D D
2003-04-25
A two-dimensional shallow layer model has been developed to predict dense gas dispersion, under realistic conditions, including complex features such as two-phase releases, obstacles and inclined ground. The model attempts to predict the time and space evolution of the cloud formed after a release of a two-phase pollutant into the atmosphere. The air-pollutant mixture is assumed ideal. The cloud evolution is described mathematically through the Cartesian, two-dimensional, shallow layer conservation equations for mixture mass, mixture momentum in two horizontal directions, total pollutant mass fraction (vapor and liquid) and mixture internal energy. Liquid mass fraction is obtained assuming phase equilibrium. Account is taken in the conservation equations for liquid slip and eventual liquid rainout through the ground. Entrainment of ambient air is modeled via an entrainment velocity model, which takes into account the effects of ground friction, ground heat transfer and relative motion between cloud and surrounding atmosphere. The model additionally accounts for thin obstacles effects in three ways. First a stepwise description of the obstacle is generated, following the grid cell faces, taking into account the corresponding area blockage. Then obstacle drag on the passing cloud is modeled by adding flow resistance terms in the momentum equations. Finally the effect of extra vorticity generation and entrainment enhancement behind obstacles is modeled by adding locally into the entrainment formula without obstacles, a characteristic velocity scale defined from the obstacle pressure drop and the local cloud height.The present model predictions have been compared against theoretical results for constant volume and constant flux gravity currents. It was found that deviations of the predicted cloud footprint area change with time from the theoretical were acceptably small, if one models the frictional forces between cloud and ambient air, neglecting the Richardson
Stolarski, R. S.; Douglass, A. R.
1986-01-01
Models of stratospheric photochemistry are generally tested by comparing their predictions for the composition of the present atmosphere with measurements of species concentrations. These models are then used to make predictions of the atmospheric sensitivity to perturbations. Here the problem of the sensitivity of such a model to chlorine perturbations ranging from the present influx of chlorine-containing compounds to several times that influx is addressed. The effects of uncertainties in input parameters, including reaction rate coefficients, cross sections, solar fluxes, and boundary conditions, are evaluated using a Monte Carlo method in which the values of the input parameters are randomly selected. The results are probability distributions for present atmosheric concentrations and for calculated perturbations due to chlorine from fluorocarbons. For more than 300 Monte Carlo runs the calculated ozone perturbation for continued emission of fluorocarbons at today's rates had a mean value of -6.2 percent, with a 1-sigma width of 5.5 percent. Using the same runs but only allowing the cases in which the calculated present atmosphere values of NO, NO2, and ClO at 25 km altitude fell within the range of measurements yielded a mean ozone depletion of -3 percent, with a 1-sigma deviation of 2.2 percent. The model showed a nonlinear behavior as a function of added fluorocarbons. The mean of the Monte Carlo runs was less nonlinear than the model run using mean value of the input parameters.
Kim, Sun Jung; Yoo, Il Young
2016-03-01
The purpose of this study was to explain the health promotion behavior of Chinese international students in Korea using a structural equation model including acculturation factors. A survey using self-administered questionnaires was employed. Data were collected from 272 Chinese students who have resided in Korea for longer than 6 months. The data were analyzed using structural equation modeling. The p value of final model is .31. The fitness parameters of the final model such as goodness of fit index, adjusted goodness of fit index, normed fit index, non-normed fit index, and comparative fit index were more than .95. Root mean square of residual and root mean square error of approximation also met the criteria. Self-esteem, perceived health status, acculturative stress and acculturation level had direct effects on health promotion behavior of the participants and the model explained 30.0% of variance. The Chinese students in Korea with higher self-esteem, perceived health status, acculturation level, and lower acculturative stress reported higher health promotion behavior. The findings can be applied to develop health promotion strategies for this population. Copyright © 2016. Published by Elsevier B.V.
S5-4: Formal Modeling of Affordance in Human-Included Systems
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Namhun Kim
2012-10-01
Full Text Available In spite of it being necessary for humans to consider modeling, analysis, and control of human-included systems, it has been considered a challenging problem because of the critical role of humans in complex systems and of humans' capability of executing unanticipated actions–both beneficial and detrimental ones. Thus, to provide systematic approaches to modeling human actions as a part of system behaviors, a formal modeling framework for human-involved systems in which humans play a controlling role based on their perceptual information is presented. The theory of affordance provides definitions of human actions and their associated properties; Finite State Automata (FSA based modeling is capable of mapping nondeterministic humans into computable components in the system representation. In this talk, we investigate the role of perception in human actions in the system operation and examine the representation of perceptual elements in affordance-based modeling formalism. The proposed framework is expected to capture the natural ways in which humans participate in the system as part of its operation. A human-machine cooperative manufacturing system control example and a human agent simulation example will be introduced for the illustrative purposes at the end of the presentation.
An extended gene protein/products Boolean network model including post-transcriptional regulation.
Benso, Alfredo; Di Carlo, Stefano; Politano, Gianfranco; Savino, Alessandro; Vasciaveo, Alessandro
2014-05-07
Networks Biology allows the study of complex interactions between biological systems using formal, well structured, and computationally friendly models. Several different network models can be created, depending on the type of interactions that need to be investigated. Gene Regulatory Networks (GRN) are an effective model commonly used to study the complex regulatory mechanisms of a cell. Unfortunately, given their intrinsic complexity and non discrete nature, the computational study of realistic-sized complex GRNs requires some abstractions. Boolean Networks (BNs), for example, are a reliable model that can be used to represent networks where the possible state of a node is a boolean value (0 or 1). Despite this strong simplification, BNs have been used to study both structural and dynamic properties of real as well as randomly generated GRNs. In this paper we show how it is possible to include the post-transcriptional regulation mechanism (a key process mediated by small non-coding RNA molecules like the miRNAs) into the BN model of a GRN. The enhanced BN model is implemented in a software toolkit (EBNT) that allows to analyze boolean GRNs from both a structural and a dynamic point of view. The open-source toolkit is compatible with available visualization tools like Cytoscape and allows to run detailed analysis of the network topology as well as of its attractors, trajectories, and state-space. In the paper, a small GRN built around the mTOR gene is used to demonstrate the main capabilities of the toolkit. The extended model proposed in this paper opens new opportunities in the study of gene regulation. Several of the successful researches done with the support of BN to understand high-level characteristics of regulatory networks, can now be improved to better understand the role of post-transcriptional regulation for example as a network-wide noise-reduction or stabilization mechanisms.
An extended gene protein/products boolean network model including post-transcriptional regulation
2014-01-01
Background Networks Biology allows the study of complex interactions between biological systems using formal, well structured, and computationally friendly models. Several different network models can be created, depending on the type of interactions that need to be investigated. Gene Regulatory Networks (GRN) are an effective model commonly used to study the complex regulatory mechanisms of a cell. Unfortunately, given their intrinsic complexity and non discrete nature, the computational study of realistic-sized complex GRNs requires some abstractions. Boolean Networks (BNs), for example, are a reliable model that can be used to represent networks where the possible state of a node is a boolean value (0 or 1). Despite this strong simplification, BNs have been used to study both structural and dynamic properties of real as well as randomly generated GRNs. Results In this paper we show how it is possible to include the post-transcriptional regulation mechanism (a key process mediated by small non-coding RNA molecules like the miRNAs) into the BN model of a GRN. The enhanced BN model is implemented in a software toolkit (EBNT) that allows to analyze boolean GRNs from both a structural and a dynamic point of view. The open-source toolkit is compatible with available visualization tools like Cytoscape and allows to run detailed analysis of the network topology as well as of its attractors, trajectories, and state-space. In the paper, a small GRN built around the mTOR gene is used to demonstrate the main capabilities of the toolkit. Conclusions The extended model proposed in this paper opens new opportunities in the study of gene regulation. Several of the successful researches done with the support of BN to understand high-level characteristics of regulatory networks, can now be improved to better understand the role of post-transcriptional regulation for example as a network-wide noise-reduction or stabilization mechanisms. PMID:25080304
A single-step genomic model with direct estimation of marker effects.
Liu, Z; Goddard, M E; Reinhardt, F; Reents, R
2014-09-01
Compared with the currently widely used multi-step genomic models for genomic evaluation, single-step genomic models can provide more accurate genomic evaluation by jointly analyzing phenotypes and genotypes of all animals and can properly correct for the effect of genomic preselection on genetic evaluations. The objectives of this study were to introduce a single-step genomic model, allowing a direct estimation of single nucleotide polymorphism (SNP) effects, and to develop efficient computing algorithms for solving equations of the single-step SNP model. We proposed an alternative to the current single-step genomic model based on the genomic relationship matrix by including an additional step for estimating the effects of SNP markers. Our single-step SNP model allowed flexible modeling of SNP effects in terms of the number and variance of SNP markers. Moreover, our single-step SNP model included a residual polygenic effect with trait-specific variance for reducing inflation in genomic prediction. A kernel calculation of the SNP model involved repeated multiplications of the inverse of the pedigree relationship matrix of genotyped animals with a vector, for which numerical methods such as preconditioned conjugate gradients can be used. For estimating SNP effects, a special updating algorithm was proposed to separate residual polygenic effects from the SNP effects. We extended our single-step SNP model to general multiple-trait cases. By taking advantage of a block-diagonal (co)variance matrix of SNP effects, we showed how to estimate multivariate SNP effects in an efficient way. A general prediction formula was derived for candidates without phenotypes, which can be used for frequent, interim genomic evaluations without running the whole genomic evaluation process. We discussed various issues related to implementation of the single-step SNP model in Holstein populations with an across-country genomic reference population.
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Huiyu eWang
2014-05-01
Full Text Available The purpose of this study was to compare results obtained from various methodologies for genome-wide association studies, when applied to real data, in terms of number and commonality of regions identified and their genetic variance explained, computational speed, and possible pitfalls in interpretations of results. Methodologies include: two iteratively reweighted single-step genomic BLUP procedures (ssGWAS1 and ssGWAS2, a single-marker model (CGWAS, and BayesB. The ssGWAS methods utilize genomic breeding values (GEBVs based on combined pedigree, genomic and phenotypic information, while CGWAS and BayesB only utilize phenotypes from genotyped animals or pseudo-phenotypes. In this study, ssGWAS was performed by converting GEBVs to SNP marker effects. Unequal variances for markers were incorporated for calculating weights into a new genomic relationship matrix. SNP weights were refined iteratively. The data was body weight at 6 weeks on 274,776 broiler chickens, of which 4553 were genotyped using a 60k SNP chip. Comparison of genomic regions was based on genetic variances explained by local SNP regions (20 SNPs. After 3 iterations, the noise was greatly reduced of ssGWAS1 and results are similar to that of CGWAS, with 4 out of the top 10 regions in common. In contrast, for BayesB, the plot was dominated by a single region explaining 23.1% of the genetic variance. This same region was found by ssGWAS1 with the same rank, but the amount of genetic variation attributed to the region was only 3%. These finding emphasize the need for caution when comparing and interpreting results from various methods, and highlight that detected associations, and strength of association, strongly depends on methodologies and details of implementations. BayesB appears to overly shrink regions to zero, while overestimating the amount of genetic variation attributed to the remaining SNP effects. The real world is most likely a compromise between methods and remains to
Analysis of electronic models for solar cells including energy resolved defect densities
Energy Technology Data Exchange (ETDEWEB)
Glitzky, Annegret
2010-07-01
We introduce an electronic model for solar cells including energy resolved defect densities. The resulting drift-diffusion model corresponds to a generalized van Roosbroeck system with additional source terms coupled with ODEs containing space and energy as parameters for all defect densities. The system has to be considered in heterostructures and with mixed boundary conditions from device simulation. We give a weak formulation of the problem. If the boundary data and the sources are compatible with thermodynamic equilibrium the free energy along solutions decays monotonously. In other cases it may be increasing, but we estimate its growth. We establish boundedness and uniqueness results and prove the existence of a weak solution. This is done by considering a regularized problem, showing its solvability and the boundedness of its solutions independent of the regularization level. (orig.)
Nonlinear Acoustics FDTD method including Frequency Power Law Attenuation for Soft Tissue Modeling
Jiménez, Noé; Sánchez-Morcillo, Víctor; Camarena, Francisco; Hou, Yi; Konofagou, Elisa E
2014-01-01
This paper describes a model for nonlinear acoustic wave propagation through absorbing and weakly dispersive media, and its numerical solution by means of finite differences in time domain method (FDTD). The attenuation is based on multiple relaxation processes, and provides frequency dependent absorption and dispersion without using computational expensive convolutional operators. In this way, by using an optimization algorithm the coefficients for the relaxation processes can be obtained in order to fit a frequency power law that agrees the experimentally measured attenuation data for heterogeneous media over the typical frequency range for ultrasound medical applications. Our results show that two relaxation processes are enough to fit attenuation data for most soft tissues in this frequency range including the fundamental and the first ten harmonics. Furthermore, this model can fit experimental attenuation data that do not follow exactly a frequency power law over the frequency range of interest. The main...
Particle-based modeling of heterogeneous chemical kinetics including mass transfer
Sengar, A.; Kuipers, J. A. M.; van Santen, Rutger A.; Padding, J. T.
2017-08-01
Connecting the macroscopic world of continuous fields to the microscopic world of discrete molecular events is important for understanding several phenomena occurring at physical boundaries of systems. An important example is heterogeneous catalysis, where reactions take place at active surfaces, but the effective reaction rates are determined by transport limitations in the bulk fluid and reaction limitations on the catalyst surface. In this work we study the macro-micro connection in a model heterogeneous catalytic reactor by means of stochastic rotation dynamics. The model is able to resolve the convective and diffusive interplay between participating species, while including adsorption, desorption, and reaction processes on the catalytic surface. Here we apply the simulation methodology to a simple straight microchannel with a catalytic strip. Dimensionless Damkohler numbers are used to comment on the spatial concentration profiles of reactants and products near the catalyst strip and in the bulk. We end the discussion with an outlook on more complicated geometries and increasingly complex reactions.
Corpuscular model of two-beam interference and double-slit experiments with single photons
Jin, Fengping; De Raedt, Hans; Michielsen, Kristel; Miyashita, Seiji
2010-01-01
We introduce an event-based corpuscular simulation model that reproduces the wave mechanical results of single-photon double slit and two-beam interference experiments and (of a one-to-one copy of an experimental realization) of a single-photon interference experiment with a Fresnel biprism. The simulation comprises models that capture the essential features of the apparatuses used in the experiment, including the single-photon detectors recording individual detector clicks. We demonstrate that incorporating in the detector model, simple and minimalistic processes mimicking the memory and threshold behavior of single-photon detectors is sufficient to produce multipath interference patterns. These multipath interference patterns are built up by individual particles taking one single path to the detector where they arrive one-by-one. The particles in our model are not corpuscular in the standard, classical physics sense in that they are information carriers that exchange information with the apparatuses of the ...
Models of epidemics: when contact repetition and clustering should be included
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Scholz Roland W
2009-06-01
Full Text Available Abstract Background The spread of infectious disease is determined by biological factors, e.g. the duration of the infectious period, and social factors, e.g. the arrangement of potentially contagious contacts. Repetitiveness and clustering of contacts are known to be relevant factors influencing the transmission of droplet or contact transmitted diseases. However, we do not yet completely know under what conditions repetitiveness and clustering should be included for realistically modelling disease spread. Methods We compare two different types of individual-based models: One assumes random mixing without repetition of contacts, whereas the other assumes that the same contacts repeat day-by-day. The latter exists in two variants, with and without clustering. We systematically test and compare how the total size of an outbreak differs between these model types depending on the key parameters transmission probability, number of contacts per day, duration of the infectious period, different levels of clustering and varying proportions of repetitive contacts. Results The simulation runs under different parameter constellations provide the following results: The difference between both model types is highest for low numbers of contacts per day and low transmission probabilities. The number of contacts and the transmission probability have a higher influence on this difference than the duration of the infectious period. Even when only minor parts of the daily contacts are repetitive and clustered can there be relevant differences compared to a purely random mixing model. Conclusion We show that random mixing models provide acceptable estimates of the total outbreak size if the number of contacts per day is high or if the per-contact transmission probability is high, as seen in typical childhood diseases such as measles. In the case of very short infectious periods, for instance, as in Norovirus, models assuming repeating contacts will also behave
Boullata, Joseph I; Holcombe, Beverly; Sacks, Gordon; Gervasio, Jane; Adams, Stephen C; Christensen, Michael; Durfee, Sharon; Ayers, Phil; Marshall, Neil; Guenter, Peggi
2016-08-01
Parenteral nutrition (PN) is a high-alert medication with a complex drug use process. Key steps in the process include the review of each PN prescription followed by the preparation of the formulation. The preparation step includes compounding the PN or activating a standardized commercially available PN product. The verification and review, as well as preparation of this complex therapy, require competency that may be determined by using a standardized process for pharmacists and for pharmacy technicians involved with PN. An American Society for Parenteral and Enteral Nutrition (ASPEN) standardized model for PN order review and PN preparation competencies is proposed based on a competency framework, the ASPEN-published interdisciplinary core competencies, safe practice recommendations, and clinical guidelines, and is intended for institutions and agencies to use with their staff.
A generalized model for optimal transport of images including dissipation and density modulation
Maas, Jan
2015-11-01
© EDP Sciences, SMAI 2015. In this paper the optimal transport and the metamorphosis perspectives are combined. For a pair of given input images geodesic paths in the space of images are defined as minimizers of a resulting path energy. To this end, the underlying Riemannian metric measures the rate of transport cost and the rate of viscous dissipation. Furthermore, the model is capable to deal with strongly varying image contrast and explicitly allows for sources and sinks in the transport equations which are incorporated in the metric related to the metamorphosis approach by Trouvé and Younes. In the non-viscous case with source term existence of geodesic paths is proven in the space of measures. The proposed model is explored on the range from merely optimal transport to strongly dissipative dynamics. For this model a robust and effective variational time discretization of geodesic paths is proposed. This requires to minimize a discrete path energy consisting of a sum of consecutive image matching functionals. These functionals are defined on corresponding pairs of intensity functions and on associated pairwise matching deformations. Existence of time discrete geodesics is demonstrated. Furthermore, a finite element implementation is proposed and applied to instructive test cases and to real images. In the non-viscous case this is compared to the algorithm proposed by Benamou and Brenier including a discretization of the source term. Finally, the model is generalized to define discrete weighted barycentres with applications to textures and objects.
Yoshihara, Lena; Roth, Christian J; Wall, Wolfgang A
2017-04-01
In this article, a novel approach is presented for combining standard fluid-structure interaction with additional volumetric constraints to model fluid flow into and from homogenised solid domains. The proposed algorithm is particularly interesting for investigations in the field of respiratory mechanics as it enables the mutual coupling of airflow in the conducting part and local tissue deformation in the respiratory part of the lung by means of a volume constraint. In combination with a classical monolithic fluid-structure interaction approach, a comprehensive model of the human lung can be established that will be useful to gain new insights into respiratory mechanics in health and disease. To illustrate the validity and versatility of the novel approach, three numerical examples including a patient-specific lung model are presented. The proposed algorithm proves its capability of computing clinically relevant airflow distribution and tissue strain data at a level of detail that is not yet achievable, neither with current imaging techniques nor with existing computational models. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.
Empirical Validation of a Thermal Model of a Complex Roof Including Phase Change Materials
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Stéphane Guichard
2015-12-01
Full Text Available This paper deals with the empirical validation of a building thermal model of a complex roof including a phase change material (PCM. A mathematical model dedicated to PCMs based on the heat apparent capacity method was implemented in a multi-zone building simulation code, the aim being to increase the understanding of the thermal behavior of the whole building with PCM technologies. In order to empirically validate the model, the methodology is based both on numerical and experimental studies. A parametric sensitivity analysis was performed and a set of parameters of the thermal model has been identified for optimization. The use of the generic optimization program called GenOpt® coupled to the building simulation code enabled to determine the set of adequate parameters. We first present the empirical validation methodology and main results of previous work. We then give an overview of GenOpt® and its coupling with the building simulation code. Finally, once the optimization results are obtained, comparisons of the thermal predictions with measurements are found to be acceptable and are presented.
Habitability of super-Earth planets around other suns: models including Red Giant Branch evolution.
von Bloh, W; Cuntz, M; Schröder, K-P; Bounama, C; Franck, S
2009-01-01
The unexpected diversity of exoplanets includes a growing number of super-Earth planets, i.e., exoplanets with masses of up to several Earth masses and a similar chemical and mineralogical composition as Earth. We present a thermal evolution model for a 10 Earth-mass planet orbiting a star like the Sun. Our model is based on the integrated system approach, which describes the photosynthetic biomass production and takes into account a variety of climatological, biogeochemical, and geodynamical processes. This allows us to identify a so-called photosynthesis-sustaining habitable zone (pHZ), as determined by the limits of biological productivity on the planetary surface. Our model considers solar evolution during the main-sequence stage and along the Red Giant Branch as described by the most recent solar model. We obtain a large set of solutions consistent with the principal possibility of life. The highest likelihood of habitability is found for "water worlds." Only mass-rich water worlds are able to realize pHZ-type habitability beyond the stellar main sequence on the Red Giant Branch.
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Zachary L Newman
2010-05-01
Full Text Available Anthrax lethal toxin (LT is a bipartite protease-containing toxin and a key virulence determinant of Bacillus anthracis. In mice, LT causes the rapid lysis of macrophages isolated from certain inbred strains, but the correlation between murine macrophage sensitivity and mouse strain susceptibility to toxin challenge is poor. In rats, LT induces a rapid death in as little as 37 minutes through unknown mechanisms. We used a recombinant inbred (RI rat panel of 19 strains generated from LT-sensitive and LT-resistant progenitors to map LT sensitivity in rats to a locus on chromosome 10 that includes the inflammasome NOD-like receptor (NLR sensor, Nlrp1. This gene is the closest rat homolog of mouse Nlrp1b, which was previously shown to control murine macrophage sensitivity to LT. An absolute correlation between in vitro macrophage sensitivity to LT-induced lysis and animal susceptibility to the toxin was found for the 19 RI strains and 12 additional rat strains. Sequencing Nlrp1 from these strains identified five polymorphic alleles. Polymorphisms within the N-terminal 100 amino acids of the Nlrp1 protein were perfectly correlated with LT sensitivity. These data suggest that toxin-mediated lethality in rats as well as macrophage sensitivity in this animal model are controlled by a single locus on chromosome 10 that is likely to be the inflammasome NLR sensor, Nlrp1.
A transient energy function for power systems including the induction motor model
Institute of Scientific and Technical Information of China (English)
无
2007-01-01
A construction method for power system transient energy function is studied in the paper, which is simple and universal, and can unify the forms of some current energy functions. A transient energy function including the induction motor model is derived using the method. The unintegrable term is dealt with to get an approximate energy function. Simulations in a 3-bus system and in the WSCC 4-generator system verify the validity of the proposed energy function. The function can be applied to direct transient stability analysis of multi-machine large power systems and provides a tool for analysis of the interaction between the generator angle stability and the load voltage stability.
A laboratory model of the aortic root flow including the coronary arteries
Querzoli, Giorgio; Fortini, Stefania; Espa, Stefania; Melchionna, Simone
2016-08-01
Cardiovascular flows have been extensively investigated by means of in vitro models to assess the prosthetic valve performances and to provide insight into the fluid dynamics of the heart and proximal aorta. In particular, the models for the study of the flow past the aortic valve have been continuously improved by including, among other things, the compliance of the vessel and more realistic geometries. The flow within the sinuses of Valsalva is known to play a fundamental role in the dynamics of the aortic valve since they host a recirculation region that interacts with the leaflets. The coronary arteries originate from the ostia located within two of the three sinuses, and their presence may significantly affect the fluid dynamics of the aortic root. In spite of their importance, to the extent of the authors' knowledge, coronary arteries were not included so far when modeling in vitro the transvalvular aortic flow. We present a pulse duplicator consisting of a passively pulsing ventricle, a compliant proximal aorta, and coronary arteries connected to the sinuses of Valsalva. The coronary flow is modulated by a self-regulating device mimicking the physiological mechanism, which is based on the contraction and relaxation of the heart muscle during the cardiac cycle. Results show that the model reproduces satisfyingly the coronary flow. The analysis of the time evolution of the velocity and vorticity fields within the aortic root reveals the main characteristics of the backflow generated through the aorta in order to feed the coronaries during the diastole. Experiments without coronary flow have been run for comparison. Interestingly, the lifetime of the vortex forming in the sinus of Valsalva during the systole is reduced by the presence of the coronaries. As a matter of fact, at the end of the systole, that vortex is washed out because of the suction generated by the coronary flow. Correspondingly, the valve closure is delayed and faster compared to the case with
A Bespoke Single-Band Hubbard Model Material
Griffin, S M; Staar, P.; Schulthess, T. C.; Troyer, M.; Spaldin, N. A.
2015-01-01
The Hubbard model, which augments independent-electron band theory with a single parameter to describe electron-electron correlations, is widely regarded to be the `standard model' of condensed matter physics. The model has been remarkably successful at addressing a range of correlation effects in solids, but beyond one dimension its solution is intractable. Much current research aims, therefore, at finding appropriate approximations to the Hubbard model phase diagram. Here we take the new ap...
Including sugar cane in the agro-ecosystem model ORCHIDEE-STICS
Valade, A.; Vuichard, N.; Ciais, P.; Viovy, N.
2010-12-01
With 4 million ha currently grown for ethanol in Brazil only, approximately half the global bioethanol production in 2005 (Smeets 2008), and a devoted land area expected to expand globally in the years to come, sugar cane is at the heart of the biofuel debate. Indeed, ethanol made from biomass is currently the most widespread option for alternative transportation fuels. It was originally promoted as a carbon neutral energy resource that could bring energy independence to countries and local opportunities to farmers, until attention was drawn to its environmental and socio-economical drawbacks. It is still not clear to which extent it is a solution or a contributor to climate change mitigation. Dynamic Global Vegetation models can help address these issues and quantify the potential impacts of biofuels on ecosystems at scales ranging from on-site to global. The global agro-ecosystem model ORCHIDEE describes water, carbon and energy exchanges at the soil-atmosphere interface for a limited number of natural and agricultural vegetation types. In order to integrate agricultural management to the simulations and to capture more accurately the specificity of crops' phenology, ORCHIDEE has been coupled with the agronomical model STICS. The resulting crop-oriented vegetation model ORCHIDEE-STICS has been used so far to simulate temperate crops such as wheat, corn and soybean. As a generic ecosystem model, each grid cell can include several vegetation types with their own phenology and management practices, making it suitable to spatial simulations. Here, ORCHIDEE-STICS is altered to include sugar cane as a new agricultural Plant functional Type, implemented and parametrized using the STICS approach. An on-site calibration and validation is then performed based on biomass and flux chamber measurements in several sites in Australia and variables such as LAI, dry weight, heat fluxes and respiration are used to evaluate the ability of the model to simulate the specific
Chen, Chang-Kun; Li, Zhi; Sun, Yun-Feng
A new model for describing the disaster system including instantaneous and continuous action synchronously has been developed. The model is composed of three primary parts, that is, the impact from its causative disaster events, stochastic noise of disaster node and self-healing function, and every part is modeled concretely in terms of their characteristics in practice. Some key parameters, namely link appearance probability, retardation coefficient, ultimate repair capacity of government, dynamical modes considering different disaster evolving chains, and the positions of link with the specific performance in disaster network system are involved. Combined with a case study, the proposed model is applied to a certain disaster evolution system, and the influence law of different parameters on disaster evolution process, in disaster networks with instantaneous-action and/or continuous-action, is presented and compared. The results indicate that the destructive impact in the networks by link in continuous action is far greater an order of magnitude than that in instantaneous action. If a link in continuous action emerges in the disaster network system, properties of the causative event for the link, link appearance probability and its position in the network all have a notable influence to the severity of the disaster network. In addition, some peculiar phenomena are also commendably observed in the disaster evolution process based on the model, such as the multipeaks emerging in the destroyed rate number curve for some crisis nodes caused by their various inducing paths together with the relevant retardation coefficients, the existence of the critical value for ultimate repair capacity to recover the disaster node, and so on.
Moreau, Caroline; Pautas, Eric; Duverlie, Charlotte; Berndt, Celia; Andro, Marion; Mahé, Isabelle; Emmerich, Joseph; Lacut, Karine; Le Gal, Grégoire; Peyron, Isabelle; Gouin-Thibault, Isabelle; Golmard, Jean-Louis; Loriot, Marie-Anne; Siguret, Virginie
2014-04-01
Indandione VKAs have been widely used for decades, especially in Eastern Europe and France. Contrary to coumarin VKAs, the relative contribution of individual factors to the indandione-VKA response is poorly known. In the present multicentre study, we sought to develop and validate a model including genetic and non-genetic factors to predict the daily fluindione dose requirement in elderly patients in whom VKA dosing is challenging. We prospectively recorded clinical and therapeutic data in 230 Caucasian inpatients mean aged 85 ± 6 years, who had reached international normalized ratio stabilisation (range 2.0-3.0) on fluindione. In the derivation cohort (n=156), we analysed 13 polymorphisms in seven genes potentially involved in the pharmacological effect or vitamin-K cycle (VKORC1, CYP4F2, EPHX1) and fluindione metabolism/transport (CYP2C9, CYP2C19, CYP3A5, ABCB1). We built a regression model incorporating non-genetic and genetic data and evaluated the model performances in a separate cohort (n=74).Body-weight, amiodarone intake, VKORC1, CYP4F2, ABCB1 genotypes were retained in the final model, accounting for 31.5% of dose variability. None influence of CYP2C9 was observed. Our final model showed good performances: in 83.3% of the validation cohort patients, the dose was accurately predicted within 5 mg, i.e.the usual step used for adjusting fluindione dosage. In conclusion, in addition to body-weight and amiodarone-intake, pharmacogenetic factors (VKORC1, CYP4F2, ABCB1) related to the pharmacodynamic effect and transport of fluindione significantly influenced the dose requirement in elderly patients while CYP2C9 did not. Studies are required to know whether fluindione could be an alternative VKA in carriers of polymorphic CYP2C9 alleles, hypersensitive to coumarins.
ISOLATION OF HEPATIC OVAL CELLS FROM DIFFERENT MODEL RATS INCLUDING DIABETIC RATS
Institute of Scientific and Technical Information of China (English)
LU Ying-li; YE Ting-ting; XIA Fang-zhen; WANG Ning-jian; YANG Hua; CHEN Yi
2009-01-01
Objective To acquire oval cells (progenitor stem cells) from adult rat liver of different models including diabetic rats. Methods Thirty Sprague-Dawley (SD) rats were divided into 5 groups randomly: control, 2-acetylaminofluorene (2-AAF), 2-AAF+partial hepatectomy (PH), 2-AAF+carbon tetrachloride (CCl4), and diabetic groups. As two-step collagenase perfusion protocol of Seglen, oval cells were isolated by Percoll density gradient centrifugation. Thy1.1 positive cells were sorted by flow cytometry, and then cultured in Dulbeccos minimum Eagles medium (DMEM). Immunofluorescence staining was applied to labelling Thy1.1. Results Different rates of Thy1.1 positive oval cells were found in different rat model groups: 0.5% in 2-AAF, 0.3% in 2-hAAF+PH, 0.2% in 2-AAF+CCl4 , 0.1% in diabetic, and 0.0% in control. Isolated cells adhered to plate with fusiform or polygon as epithelial cells. Conclusion Progenitor stem cells exist in injured liver tissue including those from diabetic rats.
Dynamic modelling and analysis of multi-machine power systems including wind farms
Tabesh, Ahmadreza
2005-11-01
This thesis introduces a small-signal dynamic model, based on a frequency response approach, for the analysis of a multi-machine power system with special focus on an induction machine based wind farm. The proposed approach is an alternative method to the conventional eigenvalue analysis method which is widely employed for small-signal dynamic analyses of power systems. The proposed modelling approach is successfully applied and evaluated for a power system that (i) includes multiple synchronous generators, and (ii) a wind farm based on either fixed-speed, variable-speed, or doubly-fed induction machine based wind energy conversion units. The salient features of the proposed method, as compared with the conventional eigenvalue analysis method, are: (i) computational efficiency since the proposed method utilizes the open-loop transfer-function matrix of the system, (ii) performance indices that are obtainable based on frequency response data and quantitatively describe the dynamic behavior of the system, and (iii) capability to formulate various wind energy conversion unit, within a wind farm, in a modular form. The developed small-signal dynamic model is applied to a set of multi-machine study systems and the results are validated based on comparison (i) with digital time-domain simulation results obtained from PSCAD/EMTDC software tool, and (ii) where applicable with eigenvalue analysis results.
A Hydrological Concept including Lateral Water Flow Compatible with the Biogeochemical Model ForSAFE
Directory of Open Access Journals (Sweden)
Giuliana Zanchi
2016-03-01
Full Text Available The study presents a hydrology concept developed to include lateral water flow in the biogeochemical model ForSAFE. The hydrology concept was evaluated against data collected at Svartberget in the Vindeln Research Forest in Northern Sweden. The results show that the new concept allows simulation of a saturated and an unsaturated zone in the soil as well as water flow that reaches the stream comparable to measurements. The most relevant differences compared to streamflow measurements are that the model simulates a higher base flow in winter and lower flow peaks after snowmelt. These differences are mainly caused by the assumptions made to regulate the percolation at the bottom of the simulated soil columns. The capability for simulating lateral flows and a saturated zone in ForSAFE can greatly improve the simulation of chemical exchange in the soil and export of elements from the soil to watercourses. Such a model can help improve the understanding of how environmental changes in the forest landscape will influence chemical loads to surface waters.
Modeling within-host dynamics of influenza virus infection including immune responses.
Directory of Open Access Journals (Sweden)
Kasia A Pawelek
Full Text Available Influenza virus infection remains a public health problem worldwide. The mechanisms underlying viral control during an uncomplicated influenza virus infection are not fully understood. Here, we developed a mathematical model including both innate and adaptive immune responses to study the within-host dynamics of equine influenza virus infection in horses. By comparing modeling predictions with both interferon and viral kinetic data, we examined the relative roles of target cell availability, and innate and adaptive immune responses in controlling the virus. Our results show that the rapid and substantial viral decline (about 2 to 4 logs within 1 day after the peak can be explained by the killing of infected cells mediated by interferon activated cells, such as natural killer cells, during the innate immune response. After the viral load declines to a lower level, the loss of interferon-induced antiviral effect and an increased availability of target cells due to loss of the antiviral state can explain the observed short phase of viral plateau in which the viral level remains unchanged or even experiences a minor second peak in some animals. An adaptive immune response is needed in our model to explain the eventual viral clearance. This study provides a quantitative understanding of the biological factors that can explain the viral and interferon kinetics during a typical influenza virus infection.
Kundin, J.; Raabe, D.; Emmerich, H.
2011-10-01
If alloys undergo an incoherent martensitic transformation, then plastic accommodation and relaxation accompany the transformation. To capture these mechanisms we develop an improved 3D microelastic-plastic phase-field model. It is based on the classical concepts of phase-field modeling of microelastic problems (Chen, L.Q., Wang Y., Khachaturyan, A.G., 1992. Philos. Mag. Lett. 65, 15-23). In addition to these it takes into account the incoherent formation of accommodation dislocations in the austenitic matrix, as well as their inheritance into the martensitic plates based on the crystallography of the martensitic transformation. We apply this new phase-field approach to the butterfly-type martensitic transformation in a Fe-30 wt%Ni alloy in direct comparison to recent experimental data (Sato, H., Zaefferer, S., 2009. Acta Mater. 57, 1931-1937). It is shown that the therein proposed mechanisms of plastic accommodation during the transformation can indeed explain the experimentally observed morphology of the martensitic plates as well as the orientation between martensitic plates and the austenitic matrix. The developed phase-field model constitutes a general simulations approach for different kinds of phase transformation phenomena that inherently include dislocation based accommodation processes. The approach does not only predict the final equilibrium topology, misfit, size, crystallography, and aspect ratio of martensite-austenite ensembles resulting from a transformation, but it also resolves the associated dislocation dynamics and the distribution, and the size of the crystals itself.
Ozguven, H. Nevzat
1991-01-01
A six-degree-of-freedom nonlinear semi-definite model with time varying mesh stiffness has been developed for the dynamic analysis of spur gears. The model includes a spur gear pair, two shafts, two inertias representing load and prime mover, and bearings. As the shaft and bearing dynamics have also been considered in the model, the effect of lateral-torsional vibration coupling on the dynamics of gears can be studied. In the nonlinear model developed several factors such as time varying mesh stiffness and damping, separation of teeth, backlash, single- and double-sided impacts, various gear errors and profile modifications have been considered. The dynamic response to internal excitation has been calculated by using the 'static transmission error method' developed. The software prepared (DYTEM) employs the digital simulation technique for the solution, and is capable of calculating dynamic tooth and mesh forces, dynamic factors for pinion and gear, dynamic transmission error, dynamic bearing forces and torsions of shafts. Numerical examples are given in order to demonstrate the effect of shaft and bearing dynamics on gear dynamics.
Özgüven, H. N.
1991-03-01
A six-degree-of-freedom non-linear semi-definite model with time varying mesh stiffness has been developed for the dynamic analysis of spur gears. The model includes a spur gear pair, two shafts, two inertias representing load and prime mover, and bearings. As the shaft and bearing dynamics have also been considered in the model, the effect of lateral-torsional vibration coupling on the dynamics of gears can be studied. In the non-linear model developed several factors such as time varying mesh stiffness and damping, separation of teeth, backlash, single- and double-sided impacts, various gear errors and profile modifications have been considered. The dynamic response to internal excitation has been calculated by using the "static transmission error method" developed. The software prepared (DYTEM) employs the digital simulation technique for the solution, and is capable of calculating dynamic tooth and mesh forces, dynamic factors for pinion and gear, dynamic transmission error, dynamic bearing forces and torsions of shafts. Numerical examples are given in order to demonstrate the effect of shaft and bearing dynamics on gear dynamics.
Energy Technology Data Exchange (ETDEWEB)
Scot Martin
2013-01-31
The chemical evolution of secondary-organic-aerosol (SOA) particles and how this evolution alters their cloud-nucleating properties were studied. Simplified forms of full Koehler theory were targeted, specifically forms that contain only those aspects essential to describing the laboratory observations, because of the requirement to minimize computational burden for use in integrated climate and chemistry models. The associated data analysis and interpretation have therefore focused on model development in the framework of modified kappa-Koehler theory. Kappa is a single parameter describing effective hygroscopicity, grouping together several separate physicochemical parameters (e.g., molar volume, surface tension, and van't Hoff factor) that otherwise must be tracked and evaluated in an iterative full-Koehler equation in a large-scale model. A major finding of the project was that secondary organic materials produced by the oxidation of a range of biogenic volatile organic compounds for diverse conditions have kappa values bracketed in the range of 0.10 +/- 0.05. In these same experiments, somewhat incongruently there was significant chemical variation in the secondary organic material, especially oxidation state, as was indicated by changes in the particle mass spectra. Taken together, these findings then support the use of kappa as a simplified yet accurate general parameter to represent the CCN activation of secondary organic material in large-scale atmospheric and climate models, thereby greatly reducing the computational burden while simultaneously including the most recent mechanistic findings of laboratory studies.
Modelling Morphogenesis: From Single Cells to Crawling Slugs
Savill, N.J.; Hogeweg, P.
2002-01-01
We present a three-dimensional hybrid cellular automata (CA)/partial differential equation (PDE) model that allows for the study of morphogenesis in simple cellular systems. We apply the model to the cellular slime mold Dictyostelium discoideum "from single cells to crawling slug". Using simple loca
From Single to Multiple Deficit Models of Developmental Disorders
Pennington, Bruce F.
2006-01-01
The emerging etiological model for developmental disorders, like dyslexia, is probabilistic and multifactorial while the prevailing cognitive model has been deterministic and often focused on a single cognitive cause, such as a phonological deficit as the cause of dyslexia. So there is a potential contradiction in our explanatory frameworks for…
Micromechanical model of the single fiber fragmentation test
DEFF Research Database (Denmark)
Sørensen, Bent F.
2017-01-01
A shear-lag model is developed for the analysis of single fiber fragmentation tests for the characterization of the mechanical properties of the fiber/matrix interface in composite materials. The model utilizes the relation for the loss in potential energy of Budiansky, Hutchinson and Evans...
Directory of Open Access Journals (Sweden)
Grosso Juan M.
2016-09-01
Full Text Available This paper proposes a reliability-based economic model predictive control (MPC strategy for the management of generalised flow-based networks, integrating some ideas on network service reliability, dynamic safety stock planning, and degradation of equipment health. The proposed strategy is based on a single-layer economic optimisation problem with dynamic constraints, which includes two enhancements with respect to existing approaches. The first enhancement considers chance-constraint programming to compute an optimal inventory replenishment policy based on a desired risk acceptability level, leading to dynamical allocation of safety stocks in flow-based networks to satisfy non-stationary flow demands. The second enhancement computes a smart distribution of the control effort and maximises actuators’ availability by estimating their degradation and reliability. The proposed approach is illustrated with an application of water transport networks using the Barcelona network as the case study considered.
Thiaw, Modou; Gascuel, Didier; Jouffre, Didier; Thiaw, Omar Thiom
2009-12-01
In Senegal, two stocks of white shrimp ( Penaeusnotialis) are intensively exploited, one in the north and another in the south. We used surplus production models including environmental effects to analyse their changes in abundance over the past 10 years and to estimate their Maximum Sustainable Yield (MSY) and the related fishing effort ( EMSY). First, yearly abundance indices were estimated from commercial statistics using GLM techniques. Then, two environmental indices were alternatively tested in the model: the coastal upwelling intensity from wind speeds provided by the SeaWifs database and the primary production derived from satellite infrared images of chlorophyll a. Models were fitted, with or without the environmental effect, to the 1996-2005 time series. They express stock abundance and catches as functions of the fishing effort and the environmental index (when considered). For the northern stock, fishing effort and abundance fluctuate over the period without any clear trends. The model based on the upwelling index explains 64.9% of the year-to-year variability. It shows that the stock was slightly overexploited in 2002-2003 and is now close to full exploitation. Stock abundance strongly depends on environmental conditions; consequently, the MSY estimate varies from 300 to 900 tons according to the upwelling intensity. For the southern stock, fishing effort has strongly increased over the past 10 years, while abundance has been reduced 4-fold. The environment has a significant effect on abundance but only explains a small part of the year-to-year variability. The best fit is obtained using the primary production index ( R2 = 0.75), and the stock is now significantly overfished regardless of environmental conditions. MSY varies from 1200 to 1800 tons according to environmental conditions. Finally, in northern Senegal, the upwelling is highly variable from year to year and constitutes the major factor determining productivity. In the south, hydrodynamic
Prechtel, Alexander; Ray, Nadja; Rupp, Andreas
2017-04-01
We want to present an approach for the mathematical, mechanistic modeling and numerical treatment of processes leading to the formation, stability, and turnover of soil micro-aggregates. This aims at deterministic aggregation models including detailed mechanistic pore-scale descriptions to account for the interplay of geochemistry and microbiology, and the link to soil functions as, e.g., the porosity. We therefore consider processes at the pore scale and the mesoscale (laboratory scale). At the pore scale transport by diffusion, advection, and drift emerging from electric forces can be taken into account, in addition to homogeneous and heterogeneous reactions of species. In the context of soil micro-aggregates the growth of biofilms or other glueing substances as EPS (extracellular polymeric substances) is important and affects the structure of the pore space in space and time. This model is upscaled mathematically in the framework of (periodic) homogenization to transfer it to the mesoscale resulting in effective coefficients/parameters there. This micro-macro model thus couples macroscopic equations that describe the transport and fluid flow at the scale of the porous medium (mesoscale) with averaged time- and space-dependent coefficient functions. These functions may be explicitly computed by means of auxiliary cell problems (microscale). Finally, the pore space in which the cell problems are defined is time and space dependent and its geometry inherits information from the transport equation's solutions. The microscale problems rely on versatile combinations of cellular automata and discontiuous Galerkin methods while on the mesoscale mixed finite elements are used. The numerical simulations allow to study the interplay between these processes.
Gabrielle, B.; Gagnaire, N.; Massad, R.; Prieur, V.; Python, Y.
2012-04-01
The potential greenhouse gas (GHG) savings resulting from the displacement of fossil energy sources by bioenergy mostly hinges on the uncertainty on the magnitude of nitrous oxide (N2O) emissions from arable soils occuring during feedstock production. These emissions are broadly related to fertilizer nitrogen input rates, but largely controlled by soil and climate factors which makes their estimation highly uncertain. Here, we set out to improve estimates of N2O emissions from bioenergy feedstocks by using ecosystem models and measurements and modeling of atmospheric N2O in the greater Paris (France) area. Ground fluxes were measured in two locations to assess the effect of soil type and management, crop type (including lignocellulosics such as triticale, switchgrass and miscanthus), and climate on N2O emission rates and dynamics. High-resolution maps of N2O emissions were generated over the Ile-de-France region (around Paris) with two ecosystem models using geographical databases on soils, weather data, land-use and crop management. The models were tested against ground flux measurements and the emission maps were fed into the atmospheric chemistry-transport model CHIMERE. The maps were tested by comparing the CHIMERE simulations with time series of N2O concentrations measured at various heights above the ground in two locations in 2007. The emissions of N2O, as integrated over the region, were used in a life-cycle assessment of representative biofuel pathways: bioethanol from wheat and sugar-beet (1st generation), and miscanthus (2nd generation chain); bio-diesel from oilseed rape. Effects related to direct and indirect land-use changes (in particular on soil carbon stocks) were also included in the assessment based on various land-use scenarios and literature references. The potential deployment of miscanthus was simulated by assuming it would be grown on the current sugar-beet growing area in Ile-de-France, or by converting land currently under permanent fallow
Validation of gyrokinetic modelling of light impurity transport including rotation in ASDEX Upgrade
Casson, F J; Angioni, C; Camenen, Y; Dux, R; Fable, E; Fischer, R; Geiger, B; Manas, P; Menchero, L; Tardini, G
2013-01-01
Upgraded spectroscopic hardware and an improved impurity concentration calculation allow accurate determination of boron density in the ASDEX Upgrade tokamak. A database of boron measurements is compared to quasilinear and nonlinear gyrokinetic simulations including Coriolis and centrifugal rotational effects over a range of H-mode plasma regimes. The peaking of the measured boron profiles shows a strong anti-correlation with the plasma rotation gradient, via a relationship explained and reproduced by the theory. It is demonstrated that the rotodiffusive impurity flux driven by the rotation gradient is required for the modelling to reproduce the hollow boron profiles at higher rotation gradients. The nonlinear simulations validate the quasilinear approach, and, with the addition of perpendicular flow shear, demonstrate that each symmetry breaking mechanism that causes momentum transport also couples to rotodiffusion. At lower rotation gradients, the parallel compressive convection is required to match the mos...
Benedetti, Fabrizio; Dorier, Julien; Burnier, Yannis; Stasiak, Andrzej
2014-03-01
Understanding the structure of interphase chromosomes is essential to elucidate regulatory mechanisms of gene expression. During recent years, high-throughput DNA sequencing expanded the power of chromosome conformation capture (3C) methods that provide information about reciprocal spatial proximity of chromosomal loci. Since 2012, it is known that entire chromatin in interphase chromosomes is organized into regions with strongly increased frequency of internal contacts. These regions, with the average size of ∼1 Mb, were named topological domains. More recent studies demonstrated presence of unconstrained supercoiling in interphase chromosomes. Using Brownian dynamics simulations, we show here that by including supercoiling into models of topological domains one can reproduce and thus provide possible explanations of several experimentally observed characteristics of interphase chromosomes, such as their complex contact maps.
Sharma, Reena; Raghuwanshi, Sanjeev Kumar
2017-02-01
Line surveillance and management information in erbium-doped fiber amplifiers (EDFAs) can be broadcast by modulating the amplitude of the low-frequency lightwave information signal, the process termed as overmodulation in the literature. This paper presents systematic solutions for the overmodulated pump and information signal transfer functions for EDFA. It includes amplified spontaneous emission (ASE) that has an impact on outcomes in the high-gain system. To the extent of our belief, the methodical model simulated with the current approach leads to a distinct perspective of an outcome in the respective field. The test bed described here is realistic. It specifically represents the overmodulation behavior in an EDFA under the influence of ASE.
Krivosheina, Marina; Kobenko, Sergey; Tuch, Elena; Kozlova, Maria
2016-11-01
This paper investigates elastic and plastic waves in HCP single crystals through the numerical simulation of strain processes in anisotropic materials based on a zinc single crystal. Velocity profiles for compression waves in the back surfaces of single-crystal zinc plates with impact loading oriented in 0001 and 10 1 ¯0 are presented in this work as a part of results obtained in numerical simulations. The mathematical model implemented in this study reflects the following characteristics of the mechanical properties inherent in anisotropic (transtropic) materials: varying degree of anisotropy of elastic and plastic properties, which includes reverse anisotropy, dependence of distribution of all types of waves on the velocity orientation, and the anisotropy of compressibility. Another feature of elastic and plastic waves in HCP single crystals is that the shock wave does not split into an elastic precursor and "plastic" compression shock wave, which is inherent in zinc single crystals with loading oriented in 0001. The study compares numerical results obtained in a three-dimensional formulation with the results of velocity profiles from the back surfaces of target plates obtained in real experiments. These results demonstrate that the mathematical model is capable of describing the properties of the above-mentioned anisotropic (transtropic) materials.
Energy Technology Data Exchange (ETDEWEB)
Chen, Lingen; Kan, Xuxian; Sun, Fengrui; Wu, Feng [College of Naval Architecture and Power, Naval University of Engineering, Wuhan 430033 (China)
2013-07-01
The operation of a universal steady flow endoreversible refrigeration cycle model consisting of a constant thermal-capacity heating branch, two constant thermal-capacity cooling branches and two adiabatic branches is viewed as a production process with exergy as its output. The finite time exergoeconomic performance optimization of the refrigeration cycle is investigated by taking profit rate optimization criterion as the objective. The relations between the profit rate and the temperature ratio of working fluid, between the COP (coefficient of performance) and the temperature ratio of working fluid, as well as the optimal relation between profit rate and the COP of the cycle are derived. The focus of this paper is to search the compromised optimization between economics (profit rate) and the utilization factor (COP) for endoreversible refrigeration cycles, by searching the optimum COP at maximum profit, which is termed as the finite-time exergoeconomic performance bound. Moreover, performance analysis and optimization of the model are carried out in order to investigate the effect of cycle process on the performance of the cycles using numerical example. The results obtained herein include the performance characteristics of endoreversible Carnot, Diesel, Otto, Atkinson, Dual and Brayton refrigeration cycles.
Directory of Open Access Journals (Sweden)
Lingen Chen, Xuxian Kan, Fengrui Sun, Feng Wu
2013-01-01
Full Text Available The operation of a universal steady flow endoreversible refrigeration cycle model consisting of a constant thermal-capacity heating branch, two constant thermal-capacity cooling branches and two adiabatic branches is viewed as a production process with exergy as its output. The finite time exergoeconomic performance optimization of the refrigeration cycle is investigated by taking profit rate optimization criterion as the objective. The relations between the profit rate and the temperature ratio of working fluid, between the COP (coefficient of performance and the temperature ratio of working fluid, as well as the optimal relation between profit rate and the COP of the cycle are derived. The focus of this paper is to search the compromised optimization between economics (profit rate and the utilization factor (COP for endoreversible refrigeration cycles, by searching the optimum COP at maximum profit, which is termed as the finite-time exergoeconomic performance bound. Moreover, performance analysis and optimization of the model are carried out in order to investigate the effect of cycle process on the performance of the cycles using numerical example. The results obtained herein include the performance characteristics of endoreversible Carnot, Diesel, Otto, Atkinson, Dual and Brayton refrigeration cycles.
Challenges of including nitrogen effects on decomposition in earth system models
Hobbie, S. E.
2011-12-01
Despite the importance of litter decomposition for ecosystem fertility and carbon balance, key uncertainties remain about how this fundamental process is affected by nitrogen (N) availability. Nevertheless, resolving such uncertainties is critical for mechanistic inclusion of such processes in earth system models, towards predicting the ecosystem consequences of increased anthropogenic reactive N. Towards that end, we have conducted a series of experiments examining nitrogen effects on litter decomposition. We found that both substrate N and externally supplied N (regardless of form) accelerated the initial decomposition rate. Faster initial decomposition rates were linked to the higher activity of carbohydrate-degrading enzymes associated with externally supplied N and the greater relative abundances of Gram negative and Gram positive bacteria associated with green leaves and externally supplied organic N (assessed using phospholipid fatty acid analysis, PLFA). By contrast, later in decomposition, externally supplied N slowed decomposition, increasing the fraction of slowly decomposing litter and reducing lignin-degrading enzyme activity and relative abundances of Gram negative and Gram positive bacteria. Our results suggest that elevated atmospheric N deposition may have contrasting effects on the dynamics of different soil carbon pools, decreasing mean residence times of active fractions comprising very fresh litter, while increasing those of more slowly decomposing fractions including more processed litter. Incorporating these contrasting effects of N on decomposition processes into models is complicated by lingering uncertainties about how these effects generalize across ecosystems and substrates.
INTERIOR MODELS OF SATURN: INCLUDING THE UNCERTAINTIES IN SHAPE AND ROTATION
Energy Technology Data Exchange (ETDEWEB)
Helled, Ravit [Department of Geophysics, Atmospheric and Planetary Sciences, Tel-Aviv University, Tel-Aviv (Israel); Guillot, Tristan [Universite de Nice-Sophia Antipolis, Observatoire de la Cote d' Azur, CNRS UMR 7293, BP 4229, F-06304 Nice (France)
2013-04-20
The accurate determination of Saturn's gravitational coefficients by Cassini could provide tighter constraints on Saturn's internal structure. Also, occultation measurements provide important information on the planetary shape which is often not considered in structure models. In this paper we explore how wind velocities and internal rotation affect the planetary shape and the constraints on Saturn's interior. We show that within the geodetic approach the derived physical shape is insensitive to the assumed deep rotation. Saturn's re-derived equatorial and polar radii at 100 mbar are found to be 54,445 {+-} 10 km and 60,365 {+-} 10 km, respectively. To determine Saturn's interior, we use one-dimensional three-layer hydrostatic structure models and present two approaches to include the constraints on the shape. These approaches, however, result in only small differences in Saturn's derived composition. The uncertainty in Saturn's rotation period is more significant: with Voyager's 10{sup h}39{sup m} period, the derived mass of heavy elements in the envelope is 0-7 M{sub Circled-Plus }. With a rotation period of 10{sup h}32{sup m}, this value becomes <4 M{sub Circled-Plus }, below the minimum mass inferred from spectroscopic measurements. Saturn's core mass is found to depend strongly on the pressure at which helium phase separation occurs, and is estimated to be 5-20 M{sub Circled-Plus }. Lower core masses are possible if the separation occurs deeper than 4 Mbar. We suggest that the analysis of Cassini's radio occultation measurements is crucial to test shape models and could lead to constraints on Saturn's rotation profile and departures from hydrostatic equilibrium.
Stucki, S; Orozco-terWengel, P; Forester, B R; Duruz, S; Colli, L; Masembe, C; Negrini, R; Landguth, E; Jones, M R; Bruford, M W; Taberlet, P; Joost, S
2016-11-01
With the increasing availability of both molecular and topo-climatic data, the main challenges facing landscape genomics - that is the combination of landscape ecology with population genomics - include processing large numbers of models and distinguishing between selection and demographic processes (e.g. population structure). Several methods address the latter, either by estimating a null model of population history or by simultaneously inferring environmental and demographic effects. Here we present samβada, an approach designed to study signatures of local adaptation, with special emphasis on high performance computing of large-scale genetic and environmental data sets. samβada identifies candidate loci using genotype-environment associations while also incorporating multivariate analyses to assess the effect of many environmental predictor variables. This enables the inclusion of explanatory variables representing population structure into the models to lower the occurrences of spurious genotype-environment associations. In addition, samβada calculates local indicators of spatial association for candidate loci to provide information on whether similar genotypes tend to cluster in space, which constitutes a useful indication of the possible kinship between individuals. To test the usefulness of this approach, we carried out a simulation study and analysed a data set from Ugandan cattle to detect signatures of local adaptation with samβada, bayenv, lfmm and an FST outlier method (FDIST approach in arlequin) and compare their results. samβada - an open source software for Windows, Linux and Mac OS X available at http://lasig.epfl.ch/sambada - outperforms other approaches and better suits whole-genome sequence data processing.
Scifoni, E.; Tinganelli, W.; Weyrather, W. K.; Durante, M.; Maier, A.; Krämer, M.
2013-06-01
We present a method for adapting a biologically optimized treatment planning for particle beams to a spatially inhomogeneous tumor sensitivity due to hypoxia, and detected e.g., by PET functional imaging. The TRiP98 code, established treatment planning system for particles, has been extended for including explicitly the oxygen enhancement ratio (OER) in the biological effect calculation, providing the first set up of a dedicated ion beam treatment planning approach directed to hypoxic tumors, TRiP-OER, here reported together with experimental tests. A simple semi-empirical model for calculating the OER as a function of oxygen concentration and dose averaged linear energy transfer, generating input tables for the program is introduced. The code is then extended in order to import such tables coming from the present or alternative models, accordingly and to perform forward and inverse planning, i.e., predicting the survival response of differently oxygenated areas as well as optimizing the required dose for restoring a uniform survival effect in the whole irradiated target. The multiple field optimization results show how the program selects the best beam components for treating the hypoxic regions. The calculations performed for different ions, provide indications for the possible clinical advantages of a multi-ion treatment. Finally the predictivity of the code is tested through dedicated cell culture experiments on extended targets irradiation using specially designed hypoxic chambers, providing a qualitative agreement, despite some limits in full survival calculations arising from the RBE assessment. The comparison of the predictions resulting by using different model tables are also reported.
Reparameterization of Single Difference and Undifferenced Kinematic GPS Positioning Models
Institute of Scientific and Technical Information of China (English)
LIU Xianglin; C D Jong; C C J M Tiberius
2003-01-01
A series of advantages of single difference (SD)and undifferenced (ZD) models are given as compared wity the double difference ezist in SD and ZD models.The reparameterization method is provided to resolve this rank defect problem by estimating some combinations of the unknowns rather than the unknowns themselves. The repatameterization of SD and ZD functional models is discussed in detail with their stochastic models. The theoretical comformation of the equivalence of undifferenced and differenced models is described in a straightforward way .The relationship between SD and ZD residuals is given and verified for some special purposes,e.g.research on the stochastical properties of GPS observations.
Iorga, G.; Hitzenberger, R.; Kasper-Giebl, A.; Puxbaum, Hans
2007-01-01
In view of both the climatic relevance of aerosols and the fact that aerosol burdens in central Europe are heavily impacted by anthropogenic sources, this study is focused on estimating the regional-scale direct radiative effect of aerosols in Austria. The aerosol data (over 80 samples in total) were collected during measurement campaigns at five sampling sites: the urban areas of Vienna, Linz, and Graz and on Mt. Rax (1644 m, regional background aerosol) and Mt. Sonnblick (3106 m, background aerosol). Aerosol mass size distributions were obtained with eight-stage (size range: 0.06-16 μm diameter) and six-stage (size range 0.1-10 μm) low-pressure cascade impactors. The size-segregated samples were analyzed for total carbon (TC), black carbon (BC), and inorganic ions. The aerosol at these five locations is compared in terms of size distributions, optical properties, and direct forcing. Mie calculations are performed for the dry aerosol at 60 wavelengths in the range 0.3-40 μm. Using mass growth factors determined earlier, the optical properties are also estimated for higher relative humidities (60%, 70%, 80%, and 90%). A box model was used to estimate direct radiative forcing (DRF). The presence of absorbing species (BC) was found to reduce the cooling effect of the aerosols. The water-soluble substances dominate radiative forcing at the urban sites, while on Rax and Sonnblick BC plays the most important role. This result can be explained by the effect of the surface albedo, which is much lower in the urban regions (0.16) than at the ice and snow-covered mountain sites. Shortwave (below 4 μm) and longwave surface albedo values for ice were 0.35 and 0.5, while for snow surface albedo, values of 0.8 (shortwave) and 0.5 (longwave) were used. In the case of dry aerosol, especially for urban sites, the unidentified material may contribute a large part to the forcing. Depending on the sampling site the estimated forcing gets more negative with increasing humidity
Directory of Open Access Journals (Sweden)
Salim Akhter Chowdhury
2014-07-01
Full Text Available We present methods to construct phylogenetic models of tumor progression at the cellular level that include copy number changes at the scale of single genes, entire chromosomes, and the whole genome. The methods are designed for data collected by fluorescence in situ hybridization (FISH, an experimental technique especially well suited to characterizing intratumor heterogeneity using counts of probes to genetic regions frequently gained or lost in tumor development. Here, we develop new provably optimal methods for computing an edit distance between the copy number states of two cells given evolution by copy number changes of single probes, all probes on a chromosome, or all probes in the genome. We then apply this theory to develop a practical heuristic algorithm, implemented in publicly available software, for inferring tumor phylogenies on data from potentially hundreds of single cells by this evolutionary model. We demonstrate and validate the methods on simulated data and published FISH data from cervical cancers and breast cancers. Our computational experiments show that the new model and algorithm lead to more parsimonious trees than prior methods for single-tumor phylogenetics and to improved performance on various classification tasks, such as distinguishing primary tumors from metastases obtained from the same patient population.
Chowdhury, Salim Akhter; Shackney, Stanley E; Heselmeyer-Haddad, Kerstin; Ried, Thomas; Schäffer, Alejandro A; Schwartz, Russell
2014-07-01
We present methods to construct phylogenetic models of tumor progression at the cellular level that include copy number changes at the scale of single genes, entire chromosomes, and the whole genome. The methods are designed for data collected by fluorescence in situ hybridization (FISH), an experimental technique especially well suited to characterizing intratumor heterogeneity using counts of probes to genetic regions frequently gained or lost in tumor development. Here, we develop new provably optimal methods for computing an edit distance between the copy number states of two cells given evolution by copy number changes of single probes, all probes on a chromosome, or all probes in the genome. We then apply this theory to develop a practical heuristic algorithm, implemented in publicly available software, for inferring tumor phylogenies on data from potentially hundreds of single cells by this evolutionary model. We demonstrate and validate the methods on simulated data and published FISH data from cervical cancers and breast cancers. Our computational experiments show that the new model and algorithm lead to more parsimonious trees than prior methods for single-tumor phylogenetics and to improved performance on various classification tasks, such as distinguishing primary tumors from metastases obtained from the same patient population.
The Adaptive LASSO Spline Estimation of Single-Index Model
Institute of Scientific and Technical Information of China (English)
LU Yiqiang; ZHANG Riquan; HU Bin
2016-01-01
In this paper,based on spline approximation,the authors propose a unified variable selection approach for single-index model via adaptive L1 penalty.The calculation methods of the proposed estimators are given on the basis of the known lars algorithm.Under some regular conditions,the authors demonstrate the asymptotic properties of the proposed estimators and the oracle properties of adaptive LASSO (aLASSO) variable selection.Simulations are used to investigate the performances of the proposed estimator and illustrate that it is effective for simultaneous variable selection as well as estimation of the single-index models.
A New Method for Characterizing Single Parametric Model Potential
Institute of Scientific and Technical Information of China (English)
P.S. Vyas; P.N. Gajjar; B.Y. Thakore; A.R. Jani
2008-01-01
A novel approach of characterizing single parametric model potential is proposed by equating total pair wise force to zero.Our well-established single parametric model potential is characterized using the proposed idea and compared the obtained parameter with parameters computed by previously used approaches.Thus characterized pseudopotential is then tested to compute total energy of alkali metals.The results establish the reliability of proposed idea of making total pair wise force to zero in determining the parameter of the pseudopotential.
A bespoke single-band Hubbard model material
Griffin, S. M.; Staar, P.; Schulthess, T. C.; Troyer, M.; Spaldin, N. A.
2016-02-01
The Hubbard model, which augments independent-electron band theory with a single parameter to describe electron-electron correlations, is widely regarded to be the "standard model" of condensed-matter physics. The model has been remarkably successful at addressing a range of correlation phenomena in solids, but it neglects many behaviors that occur in real materials, such as phonons, long-range interactions, and, in its simplest form, multiorbital effects. Here, we use ab initio electronic structure methods to design a material whose Hamiltonian matches as closely as possible that of the single-band Hubbard model. Our motivation is to compare the measured properties of our new material to those predicted by reliable theoretical solutions of the Hubbard model to determine the relevance of the model in the description of real materials. After identifying an appropriate crystal class and several appropriate chemistries, we use density-functional theory and dynamical mean-field theory to screen for the desired electronic band structure and metal-insulator transition. We then explore the most promising candidates for structural stability and suitability for doping, and we propose specific materials for subsequent synthesis. Finally, we identify a regime—that should manifest in our bespoke material—in which the single-band Hubbard model on a triangular lattice exhibits exotic d -wave superconductivity.
Directory of Open Access Journals (Sweden)
W. Kapturkiewicz
2008-12-01
Full Text Available The, developed in this study, simple model and numerical solution of diffusion growth of the solid phase under the conditions of directional solidification allow for the effect of constituent diffusion in both liquid and solid phase and assume the process run in which (like in reality the preset parameter is the velocity of sample (pulling velocity at a preset temperature gradient. The solid/liquid interface velocity is not the process parameter (like it is in numerous other solutions proposed so far but a function of this process. The effect of convection outside the diffusion layer has been included in mass balance under the assumption that in the zone of convection the mixing is complete. The above assumptions enabled solving the kinetics of growth of the solid phase (along with the diffusion field in solid and liquid phase under the conditions of diffusion well reflecting the process run starting with the initial transient state, going through the steady state period in central part of the casting, and ending in a terminal transient state. In the numerical solution obtained by the finite difference method with variable grid dimensions, the error of the mass control balance over the whole process range was 1 - 2 %.
On the Predictiveness of Single-Field Inflationary Models
Burgess, C.P.; Trott, Michael
2014-01-01
We re-examine the predictiveness of single-field inflationary models and discuss how an unknown UV completion can complicate determining inflationary model parameters from observations, even from precision measurements. Besides the usual naturalness issues associated with having a shallow inflationary potential, we describe another issue for inflation, namely, unknown UV physics modifies the running of Standard Model (SM) parameters and thereby introduces uncertainty into the potential inflationary predictions. We illustrate this point using the minimal Higgs Inflationary scenario, which is arguably the most predictive single-field model on the market, because its predictions for $A_s$, $r$ and $n_s$ are made using only one new free parameter beyond those measured in particle physics experiments, and run up to the inflationary regime. We find that this issue can already have observable effects. At the same time, this UV-parameter dependence in the Renormalization Group allows Higgs Inflation to occur (in prin...
Connecting single-stock assessment models through correlated survival
DEFF Research Database (Denmark)
Albertsen, Christoffer Moesgaard; Nielsen, Anders; Thygesen, Uffe Høgsbro
2017-01-01
times. We propose a simple alternative. In three case studies each with two stocks, we improve the single-stock models, as measured by Akaike information criterion, by adding correlation in the cohort survival. To limit the number of parameters, the correlations are parameterized through...... the corresponding partial correlations. We consider six models where the partial correlation matrix between stocks follows a band structure ranging from independent assessments to complex correlation structures. Further, a simulation study illustrates the importance of handling correlated data sufficiently......Fisheries management is mainly conducted via single-stock assessment models assuming that fish stocks do not interact, except through assumed natural mortalities. Currently, the main alternative is complex ecosystem models which require extensive data, are difficult to calibrate, and have long run...
Effective single scattering albedo estimation using regional climate model
CSIR Research Space (South Africa)
Tesfaye, M
2011-09-01
Full Text Available In this study, by modifying the optical parameterization of Regional Climate model (RegCM), the authors have computed and compared the Effective Single-Scattering Albedo (ESSA) which is a representative of VIS spectral region. The arid, semi...
Satpathy, Preseela; Biernacki, Piotr; Cypionka, Heribert; Steinigeweg, Sven
2016-12-05
A modified Anaerobic Digestion Model No. 1 (ADM1xp) including lactate was applied to a full-scale biogas plant. This model considers monosaccharides to degrade through lactic acid, which further degrades majorly into acetate followed by propionate and butyrate. Experimental data were derived from the previous works in the same laboratory, and the proposed parameters were validated against batch experiments. After successful validation, the biogas plant bearing a fermenter size of 7 dam(3) and operated with food waste and cattle manure was simulated. The biogas production and methane content were reliably simulated, and a good fit could be obtained against the experimental data with an average difference of less than 1%. When compared to the original ADM1 model, the performance of the lactate-incorporated model was found to be improved. Inclusion of lactate as a parameter in the ADM1xp model is recommended for an increased sensitivity and enhanced prediction principally for systems dealing with high carbohydrate and lactate loads.
Indian Academy of Sciences (India)
Wei Lu; Qingchun Yang; Jordi D Martín; Ricardo Juncosa
2013-04-01
During the 1990s, groundwater overexploitation has resulted in seawater intrusion in the coastal aquifer of the Shenzhen city, China. Although water supply facilities have been improved and alleviated seawater intrusion in recent years, groundwater overexploitation is still of great concern in some local areas. In this work we present a three-dimensional density-dependent numerical model developed with the FEFLOW code, which is aimed at simulating the extent of seawater intrusion while including tidal effects and different groundwater pumping scenarios. Model calibration, using waterheads and reported chloride concentration, has been performed based on the data from 14 boreholes, which were monitored from May 2008 to December 2009. A fairly good fitness between the observed and computed values was obtained by a manual trial-and-error method. Model prediction has been carried out forward 3 years with the calibrated model taking into account high, medium and low tide levels and different groundwater exploitation schemes. The model results show that tide-induced seawater intrusion significantly affects the groundwater levels and concentrations near the estuarine of the Dasha river, which implies that an important hydraulic connection exists between this river and groundwater, even considering that some anti-seepage measures were taken in the river bed. Two pumping scenarios were considered in the calibrated model in order to predict the future changes in the water levels and chloride concentration. The numerical results reveal a decreased tendency of seawater intrusion if groundwater exploitation does not reach an upper bound of about 1.32 × 104 m3/d. The model results provide also insights for controlling seawater intrusion in such coastal aquifer systems.
ETM documentation update – including modelling conventions and manual for software tools
DEFF Research Database (Denmark)
Grohnheit, Poul Erik
, it summarises the work done during 2013, and it also contains presentations for promotion of fusion as a future element in the electricity generation mix and presentations for the modelling community concerning model development and model documentation – in particular for TIAM collaboration workshops....
Latham, J.P.; Xiang, J.; Belayneh, M.; Nick, H.M.; Tsang, C.F.; Blunt, M.J.
2013-01-01
The influence of in-situ stresses on flow processes in fractured rock is investigated using a novel modelling approach. The combined finite-discrete element method (FEMDEM) is used to model the deformation of a fractured rock mass. The fracture wall displacements and aperture changes are modelled in
A sub-circuit MOSFET model with a wide temperature range including cryogenic temperature*
Institute of Scientific and Technical Information of China (English)
Jia Kan; Sun Weifeng; Shi Longxing
2011-01-01
A sub-circuit SPICE model ofa MOSFET for low temperature operation is presented. Two resistors are introduced for the freeze-out effect, and the explicit behavioral models are developed for them. The model can be used in a wide temperature range covering both cryogenic temperature and regular temperatures.
Including Overweight or Obese Students in Physical Education: A Social Ecological Constraint Model
Li, Weidong; Rukavina, Paul
2012-01-01
In this review, we propose a social ecological constraint model to study inclusion of overweight or obese students in physical education by integrating key concepts and assumptions from ecological constraint theory in motor development and social ecological models in health promotion and behavior. The social ecological constraint model proposes…
A methodology for including wall roughness effects in k-ε low-Reynolds turbulence models
Energy Technology Data Exchange (ETDEWEB)
Ambrosini, W., E-mail: walter.ambrosini@ing.unipi.it; Pucciarelli, A.; Borroni, I.
2015-05-15
Highlights: • A model for taking into account wall roughness in low-Reynolds k-ε models is presented. • The model is subjected to a first validation to show its potential in general applications. • The application of the model in predicting heat transfer to supercritical fluids is also discussed. - Abstract: A model accounting for wall roughness effects in k-ε low-Reynolds turbulence models is described in the present paper. In particular, the introduction in the transport equations of k and ε of additional source terms related to roughness, based on simple assumptions and dimensional relationships, is proposed. An objective of the present paper, in addition to obtaining more realistic predictions of wall friction, is the application of the proposed model to the study of heat transfer to supercritical fluids. A first validation of the model is reported. The model shows the capability of predicting, at least qualitatively, some of the most important trends observed when dealing with rough pipes in very different flow conditions. Qualitative comparisons with some DNS data available in literature are also performed. Further analyses provided promising results concerning the ability of the model in reproducing the trend of friction factor when varying the flow conditions, though improvements are necessary for achieving better quantitative accuracy. First applications of the model in simulating heat transfer to supercritical fluids are also described, showing the capability of the model to affect the predictions of these heat transfer phenomena, in particular in the vicinity of the pseudo-critical conditions. A more extended application of the model to relevant deteriorated heat transfer conditions will clarify the usefulness of this modelling methodology in improving predictions of these difficult phenomena. Whatever the possible success in this particular application that motivated its development, this approach suggests a general methodology for accounting
Non-Gaussianity in single field models without slow-roll
Noller, Johannes
2011-01-01
We investigate non-Gaussianity in general single field models without assuming slow-roll conditions or the exact scale-invariance of the scalar power spectrum. The models considered include general single field inflation (e.g. DBI and canonical inflation) as well as bimetric models. We compute the full non-Gaussian amplitude, its size fnl, its shape, and the running with scale n_{NG}. In doing so we show that observational constraints allow significant violations of slow roll conditions and we derive explicit bounds on slow-roll parameters for fast-roll single field scenarios. A variety of new observational signatures is found for models respecting these bounds. We also explicitly construct concrete model implementations giving rise to this new phenomenology.
What is the most realistic single-compartment model of spike initiation?
Directory of Open Access Journals (Sweden)
Romain Brette
2015-04-01
Full Text Available A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH model to various flavors of integrate-and-fire (IF models. The main classes of models differ in the way spikes are initiated. Which one is the most realistic? Starting with some general epistemological considerations, I show that the notion of realism comes in two dimensions: empirical content (the sort of predictions that a model can produce and empirical accuracy (whether these predictions are correct. I then examine the realism of the main classes of single-compartment models along these two dimensions, in light of recent experimental evidence.
Parameter Estimation for Single Diode Models of Photovoltaic Modules
Energy Technology Data Exchange (ETDEWEB)
Hansen, Clifford [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States). Photovoltaic and Distributed Systems Integration Dept.
2015-03-01
Many popular models for photovoltaic system performance employ a single diode model to compute the I - V curve for a module or string of modules at given irradiance and temperature conditions. A single diode model requires a number of parameters to be estimated from measured I - V curves. Many available parameter estimation methods use only short circuit, o pen circuit and maximum power points for a single I - V curve at standard test conditions together with temperature coefficients determined separately for individual cells. In contrast, module testing frequently records I - V curves over a wide range of irradi ance and temperature conditions which, when available , should also be used to parameterize the performance model. We present a parameter estimation method that makes use of a fu ll range of available I - V curves. We verify the accuracy of the method by recov ering known parameter values from simulated I - V curves . We validate the method by estimating model parameters for a module using outdoor test data and predicting the outdoor performance of the module.
Single-cluster dynamics for the random-cluster model
Deng, Youjin; Qian, Xiaofeng; Blöte, Henk W. J.
2009-09-01
We formulate a single-cluster Monte Carlo algorithm for the simulation of the random-cluster model. This algorithm is a generalization of the Wolff single-cluster method for the q -state Potts model to noninteger values q>1 . Its results for static quantities are in a satisfactory agreement with those of the existing Swendsen-Wang-Chayes-Machta (SWCM) algorithm, which involves a full-cluster decomposition of random-cluster configurations. We explore the critical dynamics of this algorithm for several two-dimensional Potts and random-cluster models. For integer q , the single-cluster algorithm can be reduced to the Wolff algorithm, for which case we find that the autocorrelation functions decay almost purely exponentially, with dynamic exponents zexp=0.07 (1), 0.521 (7), and 1.007 (9) for q=2 , 3, and 4, respectively. For noninteger q , the dynamical behavior of the single-cluster algorithm appears to be very dissimilar to that of the SWCM algorithm. For large critical systems, the autocorrelation function displays a range of power-law behavior as a function of time. The dynamic exponents are relatively large. We provide an explanation for this peculiar dynamic behavior.
Critical quasiparticles in single-impurity and lattice Kondo models
Vojta, M.; Bulla, R.; Wölfle, P.
2015-07-01
Quantum criticality in systems of local moments interacting with itinerant electrons has become an important and diverse field of research. Here we review recent results which concern (a) quantum phase transitions in single-impurity Kondo and Anderson models and (b) quantum phase transitions in heavy-fermion lattice models which involve critical quasiparticles. For (a) the focus will be on impurity models with a pseudogapped host density of states and their applications, e.g., in graphene and other Dirac materials, while (b) is devoted to strong-coupling behavior near antiferromagnetic quantum phase transitions, with potential applications in a variety of heavy-fermion metals.
A single predator multiple prey model with prey mutation
Mullan, Rory; Abernethy, Gavin M.; Glass, David H.; McCartney, Mark
2016-11-01
A multiple species predator-prey model is expanded with the introduction of a coupled map lattice for the prey, allowing the prey to mutate discretely into other prey species. The model is examined in its single predator, multiple mutating prey form. Two unimodal maps are used for the underlying dynamics of the prey species, with different predation strategies being used. Conclusions are drawn on how varying the control parameters of the model governs the overall behaviour and survival of the species. It is observed that in such a complex system, with multiple mutating prey, a large range of non-linear dynamics is possible.
Multi products single machine EPQ model with immediate rework process
Directory of Open Access Journals (Sweden)
Jahangir Biabani
2012-01-01
Full Text Available This paper develops an economic production quantity (EPQ inventory model with rework process for a single stage production system with one machine. The existence of a unique machine results in limited production capacity. The aim of this research is to determine both the optimal cycle length and the optimal production quantity for each product to minimize the expected total cost (holding, production, setup, rework costs. The convexity of the inventory model is derived. Also the objective function is proved to be convex. The proposed inventory model is validated with illustrating numerical examples and the optimal period length and the total system cost are analyzed.
Parra, J.; Vicuña, Cristián Molina
2017-08-01
Planetary gearboxes are important components of many industrial applications. Vibration analysis can increase their lifetime and prevent expensive repair and safety concerns. However, an effective analysis is only possible if the vibration features of planetary gearboxes are properly understood. In this paper, models are used to study the frequency content of planetary gearbox vibrations under non-fault and different fault conditions. Two different models are considered: phenomenological model, which is an analytical-mathematical formulation based on observation, and lumped-parameter model, which is based on the solution of the equations of motion of the system. Results of both models are not directly comparable, because the phenomenological model provides the vibration on a fixed radial direction, such as the measurements of the vibration sensor mounted on the outer part of the ring gear. On the other hand, the lumped-parameter model provides the vibrations on the basis of a rotating reference frame fixed to the carrier. To overcome this situation, a function to decompose the lumped-parameter model solutions to a fixed reference frame is presented. Finally, comparisons of results from both model perspectives and experimental measurements are presented.
Single Plant Root System Modeling under Soil Moisture Variation
Yabusaki, S.; Fang, Y.; Chen, X.; Scheibe, T. D.
2016-12-01
A prognostic Virtual Plant-Atmosphere-Soil System (vPASS) model is being developed that integrates comprehensively detailed mechanistic single plant modeling with microbial, atmospheric, and soil system processes in its immediate environment. Three broad areas of process module development are targeted: Incorporating models for root growth and function, rhizosphere interactions with bacteria and other organisms, litter decomposition and soil respiration into established porous media flow and reactive transport models Incorporating root/shoot transport, growth, photosynthesis and carbon allocation process models into an integrated plant physiology model Incorporating transpiration, Volatile Organic Compounds (VOC) emission, particulate deposition and local atmospheric processes into a coupled plant/atmosphere model. The integrated plant ecosystem simulation capability is being developed as open source process modules and associated interfaces under a modeling framework. The initial focus addresses the coupling of root growth, vascular transport system, and soil under drought scenarios. Two types of root water uptake modeling approaches are tested: continuous root distribution and constitutive root system architecture. The continuous root distribution models are based on spatially averaged root development process parameters, which are relatively straightforward to accommodate in the continuum soil flow and reactive transport module. Conversely, the constitutive root system architecture models use root growth rates, root growth direction, and root branching to evolve explicit root geometries. The branching topologies require more complex data structures and additional input parameters. Preliminary results are presented for root model development and the vascular response to temporal and spatial variations in soil conditions.
A two-dimensional simulation model of phosphorus uptake including crop growth and P-response
Mollier, A.; Willigen, de P.; Heinen, M.; Morel, C.; Schneider, A.; Pellerin, S.
2008-01-01
Modelling nutrient uptake by crops implies considering and integrating the processes controlling the soil nutrient supply, the uptake by the root system and relationships between the crop growth response and the amount of nutrient absorbed. We developed a model that integrates both dynamics of maize
European column buckling curves and finite element modelling including high strength steels
DEFF Research Database (Denmark)
Jönsson, Jeppe; Stan, Tudor-Cristian
2017-01-01
Eurocode allows for finite element modelling of plated steel structures, however the information in the code on how to perform the analysis or what assumptions to make is quite sparse. The present paper investigates the deterministic modelling of flexural column buckling using plane shell element...
Dipole model analysis of highest precision HERA data, including very low $Q^2$'s
Luszczak, Agnieszka
2016-01-01
We analyse, within a dipole model, the final, inclusive HERA DIS cross section data in the low $x$ region, using fully correlated errors. We show, that these highest precision data are very well described within the dipole model framework starting from $Q^2$ values of 3.5 GeV$^2$ to the highest values of $Q^2 =$ 250 GeV$^2$.
A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk
DEFF Research Database (Denmark)
Jensen, Ninna Reitzel; Schomacker, Kristian Juul
2015-01-01
Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death......, disability, etc. In our treatment of participating life insurance, we have special focus on the bonus schemes “consolidation” and “additional benefits”, and one goal is to formalize how these work and interact. Another goal is to describe similarities and differences between participating life insurance...... model by conducting scenario analysis based on Monte Carlo simulation, but the model applies to scenarios in general and to worst-case and best-estimate scenarios in particular. In addition to easy computations, our model offers a common framework for the valuation of life insurance payments across...
A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk
DEFF Research Database (Denmark)
Jensen, Ninna Reitzel; Schomacker, Kristian Juul
2015-01-01
and unit-linked insurance. By use of a two-account model, we are able to illustrate general concepts without making the model too abstract. To allow for complicated financial markets without dramatically increasing the mathematical complexity, we focus on economic scenarios. We illustrate the use of our......Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death...... product types. This enables comparison of participating life insurance products and unit-linked insurance products, thus building a bridge between the two different ways of formalizing life insurance products. Finally, our model distinguishes itself from the existing literature by taking into account...
Gasification of biomass in a fixed bed downdraft gasifier--a realistic model including tar.
Barman, Niladri Sekhar; Ghosh, Sudip; De, Sudipta
2012-03-01
This study presents a model for fixed bed downdraft biomass gasifiers considering tar also as one of the gasification products. A representative tar composition along with its mole fractions, as available in the literature was used as an input parameter within the model. The study used an equilibrium approach for the applicable gasification reactions and also considered possible deviations from equilibrium to further upgrade the equilibrium model to validate a range of reported experimental results. Heat balance was applied to predict the gasification temperature and the predicted values were compared with reported results in literature. A comparative study was made with some reference models available in the literature and also with experimental results reported in the literature. Finally a predicted variation of performance of the gasifier by this validated model for different air-fuel ratio and moisture content was also discussed.
Including Tropical Croplands in a Terrestrial Biosphere Model: Application to West Africa
Berg, A.; Sultan, B.; de Noblet, N.
2008-12-01
Studying the large-scale relationships between climate and agriculture raises two different issues: the impact of climate on crops, and the potential feedbacks to climate from croplands. A relevant framework to consistently address this twofold issue is to extend existing Dynamic Global Vegetation Models, which can be coupled to climate models, in order to explicitly account for croplands. Here we present the first results of such a strategy applied to tropical croplands over West Africa. We introduce directly into the terrestrial biosphere model ORCHIDEE (IPSL) adequate processes and parametrizations taken from the crop model SARRAH (CIRAD), which is calibrated for millet over this region. The resulting model, ORCH-mil, realistically simulates the growth and yield of millet when tested on an experimental station in Senegal. The model is then applied over West Africa using a 36-year climate reanalysis dataset. First the model is tested in terms of yield simulation, against national millet yields from the FAO database. The ability of the model to reproduce the spatial and temporal variability of millet yields is assessed. Then, the effects on land surface fluxes of explicitly accounting for croplands are examined, by comparison between ORCH-mil and ORCHIDEE. These first simulations show consistent results, but underline the need for some further development and validation of the model if it is to simulate yields accurately. In terms of land surface fluxes, significant differences between ORCH-mil and ORCHIDEE appear, mainly via changes in evaporation and albedo. The potential impact on the west African monsoon system of such differences needs to be investigated by coupling ORCH-mil to a climate model: first results from such an experiment will be presented.
Energy Technology Data Exchange (ETDEWEB)
Carlen, Ida; Nikolopoulos, Anna; Isaeus, Martin (AquaBiota Water Research, Stockholm (SE))
2007-06-15
GIS grids (maps) of marine parameters were created using point data from previous site investigations in the Forsmark and Oskarshamn areas. The proportion of global radiation reaching the sea bottom in Forsmark and Oskarshamn was calculated in ArcView, using Secchi depth measurements and the digital elevation models for the respective area. The number of days per year when the incoming light exceeds 5 MJ/m2 at the bottom was then calculated using the result of the previous calculations together with measured global radiation. Existing modelled grid-point data on bottom and pelagic temperature for Forsmark were interpolated to create surface covering grids. Bottom and pelagic temperature grids for Oskarshamn were calculated using point measurements to achieve yearly averages for a few points and then using regressions with existing grids to create new maps. Phytoplankton primary production in Forsmark was calculated using point measurements of chlorophyll and irradiance, and a regression with a modelled grid of Secchi depth. Distribution of biomass of macrophyte communities in Forsmark and Oskarshamn was calculated using spatial modelling in GRASP, based on field data from previous surveys. Physical parameters such as those described above were used as predictor variables. Distribution of biomass of different functional groups of fish in Forsmark was calculated using spatial modelling based on previous surveys and with predictor variables such as physical parameters and results from macrophyte modelling. All results are presented as maps in the report. The quality of the modelled predictions varies as a consequence of the quality and amount of the input data, the ecology and knowledge of the predicted phenomena, and by the modelling technique used. A substantial part of the variation is not described by the models, which should be expected for biological modelling. Therefore, the resulting grids should be used with caution and with this uncertainty kept in mind. All
Neumann, R. B.; Cardon, Z. G.; Rockwell, F. E.; Teshera-Levye, J.; Zwieniecki, M.; Holbrook, N. M.
2013-12-01
The movement of water from moist to dry soil layers through the root systems of plants, referred to as hydraulic redistribution (HR), occurs throughout the world and is thought to influence carbon and water budgets and ecosystem functioning. The realized hydrologic, biogeochemical, and ecological consequences of HR depend on the amount of redistributed water, while the ability to assess these impacts requires models that correctly capture HR magnitude and timing. Using several soil types and two eco-types of Helianthus annuus L. in split-pot experiments, we examined how well the widely used HR modeling formulation developed by Ryel et al. (2002) could match experimental determination of HR across a range of water potential driving gradients. H. annuus carries out extensive nighttime transpiration, and though over the last decade it has become more widely recognized that nighttime transpiration occurs in multiple species and many ecosystems, the original Ryel et al. (2002) formulation does not include the effect of nighttime transpiration on HR. We developed and added a representation of nighttime transpiration into the formulation, and only then was the model able to capture the dynamics and magnitude of HR we observed as soils dried and nighttime stomatal behavior changed, both influencing HR.
Multiscale modeling of brain dynamics: from single neurons and networks to mathematical tools.
Siettos, Constantinos; Starke, Jens
2016-09-01
The extreme complexity of the brain naturally requires mathematical modeling approaches on a large variety of scales; the spectrum ranges from single neuron dynamics over the behavior of groups of neurons to neuronal network activity. Thus, the connection between the microscopic scale (single neuron activity) to macroscopic behavior (emergent behavior of the collective dynamics) and vice versa is a key to understand the brain in its complexity. In this work, we attempt a review of a wide range of approaches, ranging from the modeling of single neuron dynamics to machine learning. The models include biophysical as well as data-driven phenomenological models. The discussed models include Hodgkin-Huxley, FitzHugh-Nagumo, coupled oscillators (Kuramoto oscillators, Rössler oscillators, and the Hindmarsh-Rose neuron), Integrate and Fire, networks of neurons, and neural field equations. In addition to the mathematical models, important mathematical methods in multiscale modeling and reconstruction of the causal connectivity are sketched. The methods include linear and nonlinear tools from statistics, data analysis, and time series analysis up to differential equations, dynamical systems, and bifurcation theory, including Granger causal connectivity analysis, phase synchronization connectivity analysis, principal component analysis (PCA), independent component analysis (ICA), and manifold learning algorithms such as ISOMAP, and diffusion maps and equation-free techniques. WIREs Syst Biol Med 2016, 8:438-458. doi: 10.1002/wsbm.1348 For further resources related to this article, please visit the WIREs website.
Constraints on gen4eralized Chaplygin gas model including gamma-ray bursts
Institute of Scientific and Technical Information of China (English)
Fa-Yin Wang; Zi-Gao Dai; Shi Qi
2009-01-01
Generalized Chaplygin gas (whose equation of state is PGCG = -A/PGCGα) was proposed as a candidate for unification of dark energy and dark matter. We inves-tigate constraints on this model with the latest observed data. We test the model with type-Ia supernovae (SNe Ia), cosmic microwave background (CMB) anisotropy, X-ray gas mass fractions in clusters, and gamma-ray bursts (GRBs). We calibrate the GRB lu-minosity relations without assuming any cosmological models using SNe Ia. We show that GRBs can extend the Hubble diagram to higher redshifts (z> 6). The GRB Hubble diagram is well behaved and delineates the shape of the Hubble diagram well. We mea-sure As≡A/PGCG,0α+1=0.68-0.08+0.04 (where PGCG,0 is the energy density today) and α=-0.22-0.13+0.15at the 1σconfidence level using all the datasets. Our results rule out the standard Chaplygin gas model (α = 1) at the 3a confidence level. The ACDM is allowed at the 2or confidence level. We find that acceleration could have started at a redshift of z ～ 0.70. The concordance of the generalized Chaplygin gas model with the age estimate of an old high redshift quasar is found. In addition, we show that GRBs can break the degeneracy between the generalized Chaplygin gas model and the XCDM model.
Simulated village locations in Thailand: A multi-scale model including a neural network approach.
Tang, Wenwu; Malanson, George P; Entwisle, Barbara
2009-04-01
The simulation of rural land use systems, in general, and rural settlement dynamics in particular has developed with synergies of theory and methods for decades. Three current issues are: linking spatial patterns and processes, representing hierarchical relations across scales, and considering nonlinearity to address complex non-stationary settlement dynamics. We present a hierarchical simulation model to investigate complex rural settlement dynamics in Nang Rong, Thailand. This simulation uses sub-models to allocate new villages at three spatial scales. Regional and sub-regional models, which involve a nonlinear space-time autoregressive model implemented in a neural network approach, determine the number of new villages to be established. A dynamic village niche model, establishing pattern-process link, was designed to enable the allocation of villages into specific locations. Spatiotemporal variability in model performance indicates the pattern of village location changes as a settlement frontier advances from rice-growing lowlands to higher elevations. Experiments results demonstrate this simulation model can enhance our understanding of settlement development in Nang Rong and thus gain insight into complex land use systems in this area.
A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk
Directory of Open Access Journals (Sweden)
Ninna Reitzel Jensen
2015-06-01
Full Text Available Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death, disability, etc. In our treatment of participating life insurance, we have special focus on the bonus schemes “consolidation” and “additional benefits”, and one goal is to formalize how these work and interact. Another goal is to describe similarities and differences between participating life insurance and unit-linked insurance. By use of a two-account model, we are able to illustrate general concepts without making the model too abstract. To allow for complicated financial markets without dramatically increasing the mathematical complexity, we focus on economic scenarios. We illustrate the use of our model by conducting scenario analysis based on Monte Carlo simulation, but the model applies to scenarios in general and to worst-case and best-estimate scenarios in particular. In addition to easy computations, our model offers a common framework for the valuation of life insurance payments across product types. This enables comparison of participating life insurance products and unit-linked insurance products, thus building a bridge between the two different ways of formalizing life insurance products. Finally, our model distinguishes itself from the existing literature by taking into account the Markov model for the state of the policyholder and, hereby, facilitating event risk.
Parameter Optimization of Single-Diode Model of Photovoltaic Cell Using Memetic Algorithm
Directory of Open Access Journals (Sweden)
Yourim Yoon
2015-01-01
Full Text Available This study proposes a memetic approach for optimally determining the parameter values of single-diode-equivalent solar cell model. The memetic algorithm, which combines metaheuristic and gradient-based techniques, has the merit of good performance in both global and local searches. First, 10 single algorithms were considered including genetic algorithm, simulated annealing, particle swarm optimization, harmony search, differential evolution, cuckoo search, least squares method, and pattern search; then their final solutions were used as initial vectors for generalized reduced gradient technique. From this memetic approach, we could further improve the accuracy of the estimated solar cell parameters when compared with single algorithm approaches.
Energy Technology Data Exchange (ETDEWEB)
Ozolin, Y.E.; Karol, I.L. [Main Geophysical Observatory, St. Petersburg (Russian Federation); Ramaroson, R. [Office National d`Etudes et de Recherches Aerospatiales (ONERA), 92 - Chatillon (France)
1997-12-31
Box model for coupled gaseous and aqueous phases is used for sensitivity study of potential transformation of trace gases in a cloud environment. The rate of this transformation decreases with decreasing of pH in droplets, with decreasing of photodissociation rates inside the cloud and with increasing of the droplet size. Model calculations show the potential formation of H{sub 2}O{sub 2} in aqueous phase and transformation of gaseous HNO{sub 3} into NO{sub x} in a cloud. This model is applied for exploration of aircraft exhausts evolution in plume inside a cloud. (author) 10 refs.
Directory of Open Access Journals (Sweden)
Rosa Ana Salas
2013-11-01
Full Text Available We propose a modeling procedure specifically designed for a ferrite inductor excited by a waveform in time domain. We estimate the loss resistance in the core (parameter of the electrical model of the inductor by means of a Finite Element Method in 2D which leads to significant computational advantages over the 3D model. The methodology is validated for an RM (rectangular modulus ferrite core working in the linear and the saturation regions. Excellent agreement is found between the experimental data and the computational results.
Recent Advances in Study on Thermodynamic Models for Real Systems Including Electrolytes
Institute of Scientific and Technical Information of China (English)
无
2006-01-01
A comprehensive review of recent advances in study on thermodynamic models for real electrolyte solutions is presented. The differences between primitive and non-primitive electrolyte models are demonstrated. Some new thermodynamic models for electrolyte solutions based on the mean spherical approximation and perturbation theory are introduced. An extended scaled-particle theory and modified CleggPitz er equation are presented for physical and chemical absorption processes with mixed solvents, respectively. A pseudo one-component two-Yukawa equation of state is used for the aqueous two-phase extraction process in charged colloidal systems.
Extension of Lithium Ion Cell Model to Include Transient and Low-Temperature Behaviour
Dudley, G.
2014-08-01
Current-interruption resistance measurements have been analysed in detail allowing the ESTEC lithium ion cell electrical/thermal model to be extended to allow modelling of cell voltage in response to imposed current changes at low temperatures and short time scales where activation polarisation becomes important. Whilst an unnecessary complication in most cases, this extension is needed under certain circumstances such as the simulation of Mars rover batteries forced to operate at low temperature and possible effects of battery voltage transients on battery-bus power subsystems. Comparison with test data show that the model is capable of giving a good fit in these circumstances.
Single-Index Additive Vector Autoregressive Time Series Models
LI, YEHUA
2009-09-01
We study a new class of nonlinear autoregressive models for vector time series, where the current vector depends on single-indexes defined on the past lags and the effects of different lags have an additive form. A sufficient condition is provided for stationarity of such models. We also study estimation of the proposed model using P-splines, hypothesis testing, asymptotics, selection of the order of the autoregression and of the smoothing parameters and nonlinear forecasting. We perform simulation experiments to evaluate our model in various settings. We illustrate our methodology on a climate data set and show that our model provides more accurate yearly forecasts of the El Niño phenomenon, the unusual warming of water in the Pacific Ocean. © 2009 Board of the Foundation of the Scandinavian Journal of Statistics.
Extending the Scope of the Acculturation/Pidginization Model to Include Cognition.
Schumann, John H.
1990-01-01
Examines five cognitive models for second-language acquisition (SLA) and assesses how each might account for the Pidginized interlanguage found in the early stages of second-language acquisition. (23 references) (JL)
A model for including Arduino microcontroller programming in the introductory physics lab
Haugen, Andrew J
2014-01-01
The paper describes a curricular framework for introducing microcontroller programming in the University Physics lab. The approach makes use of Modeling Instruction, an effective approach for teaching science at the secondary level in which student learn the standard material by developing and deploying models of the physical world. In our approach, students engage with a context-rich problem that can be solved with one or more sensors and a microcontroller. The solution path we describe then consists of developing a mathematical model for how the sensors' data can be mapped to a meaningful measurement, and further, developing an algorithmic model that will be implemented in the microcontroller. Once the system is developed and implemented, students are given an array of similar problems in which they can deploy their data collection system. Results from the implementation of this idea, in two University Physics sections, using Arduino microcontrollers, are also described.
Global warming in a coupled climate model including oceanic eddy-induced advection
Hirst, Anthony C.; Gordon, Hal B.; O'Farrell, Siobhan P.
The Gent and McWilliams (GM) parameterization for large-scale water transport caused by mesoscale oceanic eddies is introduced into the oceanic component of a global coupled ocean-atmosphere model. Parallel simulations with and without the GM scheme are performed to examine the effect of this parameterization on model behavior under constant atmospheric CO2 and on the model response to increasing CO2. The control (constant CO2) runs show substantial differences in the oceanic stratification and extent of convection, similar to differences found previously using uncoupled ocean models. The transient (increasing CO2) runs show moderate differences in the rate of oceanic heat sequestration (less in the GM case), as expected based on passive tracer uptake studies. However, the surface warming is weaker in the GM case, especially over the Southern Ocean, which is contrary to some recent supposition. Reasons for the reduced warming in the GM case are discussed.
Empirical Validation of a Thermal Model of a Complex Roof Including Phase Change Materials
Guichard, Stéphane; Bigot, Dimitri; Malet-Damour, Bruno; Libelle, Teddy; Boyer, Harry
2015-01-01
This paper deals with the empirical validation of a building thermal model using a phase change material (PCM) in a complex roof. A mathematical model dedicated to phase change materials based on the heat apparent capacity method was implemented in a multi-zone building simulation code, the aim being to increase understanding of the thermal behavior of the whole building with PCM technologies. To empirically validate the model, the methodology is based both on numerical and experimental studies. A parametric sensitivity analysis was performed and a set of parameters of the thermal model have been identified for optimization. The use of a generic optimization program called GenOpt coupled to the building simulation code enabled to determine the set of adequate parameters. We first present the empirical validation methodology and main results of previous work. We then give an overview of GenOpt and its coupling with the building simulation code. Finally, once the optimization results are obtained, comparisons o...
Directory of Open Access Journals (Sweden)
Camilo Saavedra
2014-07-01
Full Text Available Single-species models have been commonly used to assess fish stocks in the past. Since these models have relatively simple data requirements, they sometimes provide the only tool available to assess the status of a stock when data are not enough to develop more complex models. However, these models have been criticized for several reasons since they provide reference points independently for each species assessed ignoring their interactions. For example, several studies suggest that even more substantial reductions in fishing mortality may be necessary to ensure MSY is reached when taking into consideration multiespecies interactions. Therefore, and as Pauly et al. (1998 stated, single-species analysis may mislead researchers and managers into neglecting the gear and trophic interactions which ultimately determine stocks long-term yields and ecosystem health. Ecosystem or multispecies models offer a number of advantages over single-species models. As stated in the workshop “Incorporating ecosystem considerations into stock assessments and management advice” (Mace, 2000 two general improvements are: a better appreciation of the fishing on ecosystem structure and function, and a better appreciation of the need to consider de value of marine ecosystems for functions other than harvesting fish. As disadvantages, multispecies models are statistically complex and include trophic relationships requiring more information (e.g. good estimations of biological parameters of each species and generally a full quantification of the diet sometimes available though the analysis of stomach contents. To reduce the number of species and therefore the amount of information needed, Minimum Realistic Models (MRMs represent an intermediate level of complexity, where only the subset of the ecosystem, important for the issue under consideration, is modeled. This approach offers the advantage of allowing a refinement of our estimates and can help answer more targeted
Kawasaki, Akira; Kubota, Kenichi; Funaki, Ikkoh; Okuno, Yoshihiro
2016-09-01
Steady-state and self-field magnetoplasmadynamic (MPD) thruster, which utilizes high-intensity direct-current (DC) discharge, is one of the prospective candidates of future high-power electric propulsion devices. In order to accurately assess the thrust performance and the electrode temperature, input electric power and wall heat flux must correctly be evaluated where electrostatic sheaths formed in close proximity of the electrodes affect these quantities. Conventional model simulates only plasma flows occurring in MPD thrusters with the absence of electrostatic sheath consideration. Therefore, this study extends the conventional model to a coupled magnetohydrodynamic (MHD) and thermal model by incorporating the phenomena relevant to the electrostatic sheaths. The sheaths are implemented as boundary condition of the MHD model on the walls. This model simulated the operation of the 100-kW-class thruster at discharge current ranging from 6 to 10 kA with argon propellant. The extended model reproduced the discharge voltages and wall heat load which are consistent with past experimental results. In addition, the simulation results indicated that cathode sheath voltages account for approximately 5-7 V subject to approximately 20 V of discharge voltages applied between the electrodes. This work was supported by JSPS KAKENHI Grant Numbers 26289328 and 15J10821.
Including sugar cane in the agro-ecosystem model ORCHIDEE-STICS: calibration and validation
Valade, A.; Vuichard, N.; Ciais, P.; Viovy, N.
2011-12-01
Sugarcane is currently the most efficient bioenergy crop with regards to the energy produced per hectare. With approximately half the global bioethanol production in 2005, and a devoted land area expected to expand globally in the years to come, sugar cane is at the heart of the biofuel debate. Dynamic global vegetation models coupled with agronomical models are powerful and novel tools to tackle many of the environmental issues related to biofuels if they are carefully calibrated and validated against field observations. Here we adapt the agro-terrestrial model ORCHIDEE-STICS for sugar cane simulations. Observation data of LAI are used to evaluate the sensitivity of the model to parameters of nitrogen absorption and phenology, which are calibrated in a systematic way for six sites in Australia and La Reunion. We find that the optimal set of parameters is highly dependent on the sites' characteristics and that the model can reproduce satisfactorily the evolution of LAI. This careful calibration of ORCHIDEE-STICS for sugar cane biomass production for different locations and technical itineraries provides a strong basis for further analysis of the impacts of bioenergy-related land use change on carbon cycle budgets. As a next step, a sensitivity analysis is carried out to estimate the uncertainty of the model in biomass and carbon flux simulation due to its parameterization.
Directory of Open Access Journals (Sweden)
Manar E. Selim
2015-01-01
Full Text Available Background: Gold nanoparticles (AuNPs have a wide range of applications in various fields. This study provides an understanding of the modulatory effects of AuNPs on an antioxidant system in male Wistar diabetic rats with autism spectrum disorder (ASD. Normal littermates fed by control mothers were injected with citrate buffer alone and served as normal, untreated controls controlin this study. Diabetes mellitus (DM was induced by administering a single intraperitoneal injection of streptozotocin (STZ (100 mg/kg to the pups of (ND diabetic group, which had been fasted overnight. Autistic pups from mothers that had received a single intraperitoneal injection of 600 mg/kg sodium valproate on day 12.5 after conception were randomly divided into 2 groups (n 2 7/group as follow; administering single intraperitoneal injection of streptozotocin (STZ ( (100 mg/kg to the overnight fasted autistic pups of (AD autistic diabetic group. The treatment was started on the 5th day after STZ injection with the same dose as in group II and it was considered as 1st day of treatment with gold nanoparticles for 7 days to each rat of (group IV treated autistic diabetic group(TAD at a dosage of 2.5 mg/kg. b. wt. Results: At this dose of administration AuNPs, the activities of hepatic superoxide dismutase (SOD, glutathione peroxidase (GPx, and catalase were greater in group TAD compared with the control group (P 0.05 in the liver of autistic diabetic AuNPs -supplemented rats, whereas reduced glutathione was markedly higher than in control rats, especially after administration of AuNPs. Moreover, the kidney functions in addition to the fat profile scoring supported the protective potential of that dose of AuNPs. The beta cells revealed euchromatic nuclei with no evidence of separation of nuclear membrane. Conclusions: Our results showed that AuNPs improved many of the oxidative stress parameters (SOD, GPx and, CAT, plasma antioxidant capacity (ORAC and lipid profile
Canuto, V. M.
1994-01-01
The Reynolds numbers that characterize geophysical and astrophysical turbulence (Re approximately equals 10(exp 8) for the planetary boundary layer and Re approximately equals 10(exp 14) for the Sun's interior) are too large to allow a direct numerical simulation (DNS) of the fundamental Navier-Stokes and temperature equations. In fact, the spatial number of grid points N approximately Re(exp 9/4) exceeds the computational capability of today's supercomputers. Alternative treatments are the ensemble-time average approach, and/or the volume average approach. Since the first method (Reynolds stress approach) is largely analytical, the resulting turbulence equations entail manageable computational requirements and can thus be linked to a stellar evolutionary code or, in the geophysical case, to general circulation models. In the volume average approach, one carries out a large eddy simulation (LES) which resolves numerically the largest scales, while the unresolved scales must be treated theoretically with a subgrid scale model (SGS). Contrary to the ensemble average approach, the LES+SGS approach has considerable computational requirements. Even if this prevents (for the time being) a LES+SGS model to be linked to stellar or geophysical codes, it is still of the greatest relevance as an 'experimental tool' to be used, inter alia, to improve the parameterizations needed in the ensemble average approach. Such a methodology has been successfully adopted in studies of the convective planetary boundary layer. Experienc e with the LES+SGS approach from different fields has shown that its reliability depends on the healthiness of the SGS model for numerical stability as well as for physical completeness. At present, the most widely used SGS model, the Smagorinsky model, accounts for the effect of the shear induced by the large resolved scales on the unresolved scales but does not account for the effects of buoyancy, anisotropy, rotation, and stable stratification. The
Inference of change-point in single index models
Institute of Scientific and Technical Information of China (English)
CAO GuanQun; WANG ZhanFeng; WU YaoHua; ZHAO LinCheng
2008-01-01
Single index models are widely used in medicine,econometrics and some other fields.In this paper,we consider the inference of a change point problem in single index models.Based on density-weighted average derivative estimation (ADE) method,we propose a statistic to test whether a change point exists or not.The null distribution of the test statistic is obtained using a permutation technique.The permuted statistic is rigorously shown to have the same distribution in the limiting sense under both null and alternative hypotheses.After the null hypothesis of no change point is rejected,an ADE-based estimate of the change point is proposed under assumption that the change point is unique.A simulation study confirms the theoretical results.
Inference of change-point in single index models
Institute of Scientific and Technical Information of China (English)
2008-01-01
Single index models are widely used in medicine, econometrics and some other fields. In this paper, we consider the inference of a change point problem in single index models. Based on density-weighted average derivative estimation (ADE) method, we propose a statistic to test whether a change point exists or not. The null distribution of the test statistic is obtained using a permutation technique. The permuted statistic is rigorously shown to have the same distribution in the limiting sense under both null and alternative hypotheses. After the null hypothesis of no change point is rejected, an ADE-based estimate of the change point is proposed under assumption that the change point is unique. A simulation study confirms the theoretical results.
Sherer, Eric A; Sale, Mark E; Pollock, Bruce G; Belani, Chandra P; Egorin, Merrill J; Ivy, Percy S; Lieberman, Jeffrey A; Manuck, Stephen B; Marder, Stephen R; Muldoon, Matthew F; Scher, Howard I; Solit, David B; Bies, Robert R
2012-08-01
compounds. The root mean squared error and absolute mean prediction error of the best single-objective hybrid genetic algorithm candidates were a median of 0.2 points higher (range of 38.9 point decrease to 27.3 point increase) and 0.02 points lower (range of 0.98 point decrease to 0.74 point increase), respectively, than that of the final stepwise models. In addition, the best single-objective, hybrid genetic algorithm candidate models had successful convergence and covariance steps for each compound, used the same compartment structure as the manual stepwise approach for 6 of 7 (86 %) compounds, and identified 54 % (7 of 13) of covariates included by the manual stepwise approach and 16 covariate relationships not included by manual stepwise models. The model parameter values between the final manual stepwise and best single-objective, hybrid genetic algorithm models differed by a median of 26.7 % (q₁ = 4.9 % and q₃ = 57.1 %). Finally, the single-objective, hybrid genetic algorithm approach was able to identify models capable of estimating absorption rate parameters for four compounds that the manual stepwise approach did not identify. The single-objective, hybrid genetic algorithm represents a general pharmacokinetic model building methodology whose ability to rapidly search the feasible solution space leads to nearly equivalent or superior model fits to pharmacokinetic data.
Toyokuni, Genti; Takenaka, Hiroshi
2012-06-01
We propose a method for modeling global seismic wave propagation through an attenuative Earth model including the center. This method enables accurate and efficient computations since it is based on the 2.5-D approach, which solves wave equations only on a 2-D cross section of the whole Earth and can correctly model 3-D geometrical spreading. We extend a numerical scheme for the elastic waves in spherical coordinates using the finite-difference method (FDM), to solve the viscoelastodynamic equation. For computation of realistic seismic wave propagation, incorporation of anelastic attenuation is crucial. Since the nature of Earth material is both elastic solid and viscous fluid, we should solve stress-strain relations of viscoelastic material, including attenuative structures. These relations represent the stress as a convolution integral in time, which has had difficulty treating viscoelasticity in time-domain computation such as the FDM. However, we now have a method using so-called memory variables, invented in the 1980s, followed by improvements in Cartesian coordinates. Arbitrary values of the quality factor (Q) can be incorporated into the wave equation via an array of Zener bodies. We also introduce the multi-domain, an FD grid of several layers with different grid spacings, into our FDM scheme. This allows wider lateral grid spacings with depth, so as not to perturb the FD stability criterion around the Earth center. In addition, we propose a technique to avoid the singularity problem of the wave equation in spherical coordinates at the Earth center. We develop a scheme to calculate wavefield variables on this point, based on linear interpolation for the velocity-stress, staggered-grid FDM. This scheme is validated through a comparison of synthetic seismograms with those obtained by the Direct Solution Method for a spherically symmetric Earth model, showing excellent accuracy for our FDM scheme. As a numerical example, we apply the method to simulate seismic
A two-phase solid/fluid model for dense granular flows including dilatancy effects
Mangeney, Anne; Bouchut, Francois; Fernandez-Nieto, Enrique; Koné, El-Hadj; Narbona-Reina, Gladys
2016-04-01
Describing grain/fluid interaction in debris flows models is still an open and challenging issue with key impact on hazard assessment [{Iverson et al.}, 2010]. We present here a two-phase two-thin-layer model for fluidized debris flows that takes into account dilatancy effects. It describes the velocity of both the solid and the fluid phases, the compression/dilatation of the granular media and its interaction with the pore fluid pressure [{Bouchut et al.}, 2016]. The model is derived from a 3D two-phase model proposed by {Jackson} [2000] based on the 4 equations of mass and momentum conservation within the two phases. This system has 5 unknowns: the solid and fluid velocities, the solid and fluid pressures and the solid volume fraction. As a result, an additional equation inside the mixture is necessary to close the system. Surprisingly, this issue is inadequately accounted for in the models that have been developed on the basis of Jackson's work [{Bouchut et al.}, 2015]. In particular, {Pitman and Le} [2005] replaced this closure simply by imposing an extra boundary condition at the surface of the flow. When making a shallow expansion, this condition can be considered as a closure condition. However, the corresponding model cannot account for a dissipative energy balance. We propose here an approach to correctly deal with the thermodynamics of Jackson's model by closing the mixture equations by a weak compressibility relation following {Roux and Radjai} [1998]. This relation implies that the occurrence of dilation or contraction of the granular material in the model depends on whether the solid volume fraction is respectively higher or lower than a critical value. When dilation occurs, the fluid is sucked into the granular material, the pore pressure decreases and the friction force on the granular phase increases. On the contrary, in the case of contraction, the fluid is expelled from the mixture, the pore pressure increases and the friction force diminishes. To
Including the effects of debris cover in a distributed glacier energy balance model (Invited)
Pellicciotti, F.; Reid, T.; Carenzo, M.; Brock, B. W.
2010-12-01
Distributed models of glacier energy balance, which make use of digital elevation models and extensive spatial data on local meteorology, have become very useful tools for predicting glacial ablation and runoff in recent years. They generally function by running a one-dimensional energy balance model at every point on a grid on the glacier surface - for each point in the grid the ablation is calculated based on the balance of heat fluxes at the ice-air boundary. However, one key component has been missing from distributed models to date, namely the effects of debris cover. Many glacier ablation zones are mantled in near-continuous blankets of rock debris, and debris-covered glaciers are important drivers of the water cycle in the European Alps, Andes and Himalayas. Moreover, debris covers have been seen to expand in recent years, so it is essential to assess exactly how the presence of debris may affect a glacier’s surface energy balance and potential responses to climate changes. The effects of a debris cover are complicated by the varying surface roughness, albedo and thermal properties of the debris in question, but generally a debris cover reduces glacier melt rate by insulating the glacier surface from direct solar radiation. Even on glaciers where the debris cover is not continuous, isolated patches of debris caused by rockfalls can affect the glacier evolution by introducing differential ablation across the glacier surface, thus creating ice-cored moraines that may persist after ‘clean’ parts of the glacier have wasted away. This paper presents the results of incorporating a one-dimensional ‘debris energy balance model’ called DEB-Model (Reid and Brock 2010) into a distributed melt model for Haut Glacier d’Arolla, Switzerland. DEB-Model numerically estimates debris surface temperature by considering the balance of heat fluxes at the air-debris interface, then calculates heat conduction through the debris in order to estimate melt rates at the
Energy Technology Data Exchange (ETDEWEB)
Razik, H. [Universite Henri Poincare, GREEN, CNRS-UMR 7037, BP 239, F-54506 Vandoeuvre-les-Nancy Cedex (France); Henao, H. [University of Picardie, CREA, 33 rue Saint Leu, F-80039 Amiens Cedex 1 (France); Carlson, R. [GRUCAD/CTC/UFSC, Campus Universitario, C.P. 436, Florianopolis - SC, 88040-900 (Brazil)
2009-01-15
This paper presents a mathematical model of a three-phase induction motor taking into consideration the interbar contacts. Several models have been available in the references. However, they consider the rotor of the induction motor as being constituted either a three-phase or a squirrel cage even if it operates under stator and/or rotor faults condition. Nonetheless, the contact between a bar and the iron core for the machine has to be considered, especially when a rotor fault occurs. It is obvious that rotor currents are under the influence of rotor constitution materials. So, the paper aim's concerns a transient model of the induction motors which can consider the rotor broken bars defect. Despite its increasing complexity, it could be able to provide with useful indications for diagnostic purposes. This model is advocated for the simulation of motors behavior under rotor defect which takes into account the interbar currents. The proposed technique is based on the mesh model analysis of the squirrel cage. As low power induction motors are prevalent in industrial plants, we pay a special attention on them. Notwithstanding, additional currents are due to the contact between the non-insulated bar constituting the squirrel cage to the rotor iron core. The monitoring of induction motors is predominantly made through the stator current analysis of the motor when it operates at nominal condition. Moreover, this one is observed in steady state operating system, knowing that the motor is generally fed by a sinusoidal supply. Consequently, simulation results showed in this paper prove the effectiveness of the proposed approach, and the impact of interbar resistance both on the model and the line current spectrum for the diagnostic. An experimental test proves the effectiveness of this model. (author)
Ward, Logan; Liu, Ruoqian; Krishna, Amar; Hegde, Vinay I.; Agrawal, Ankit; Choudhary, Alok; Wolverton, Chris
2017-07-01
While high-throughput density functional theory (DFT) has become a prevalent tool for materials discovery, it is limited by the relatively large computational cost. In this paper, we explore using DFT data from high-throughput calculations to create faster, surrogate models with machine learning (ML) that can be used to guide new searches. Our method works by using decision tree models to map DFT-calculated formation enthalpies to a set of attributes consisting of two distinct types: (i) composition-dependent attributes of elemental properties (as have been used in previous ML models of DFT formation energies), combined with (ii) attributes derived from the Voronoi tessellation of the compound's crystal structure. The ML models created using this method have half the cross-validation error and similar training and evaluation speeds to models created with the Coulomb matrix and partial radial distribution function methods. For a dataset of 435 000 formation energies taken from the Open Quantum Materials Database (OQMD), our model achieves a mean absolute error of 80 meV/atom in cross validation, which is lower than the approximate error between DFT-computed and experimentally measured formation enthalpies and below 15% of the mean absolute deviation of the training set. We also demonstrate that our method can accurately estimate the formation energy of materials outside of the training set and be used to identify materials with especially large formation enthalpies. We propose that our models can be used to accelerate the discovery of new materials by identifying the most promising materials to study with DFT at little additional computational cost.
Stochastic models for spike trains of single neurons
Sampath, G
1977-01-01
1 Some basic neurophysiology 4 The neuron 1. 1 4 1. 1. 1 The axon 7 1. 1. 2 The synapse 9 12 1. 1. 3 The soma 1. 1. 4 The dendrites 13 13 1. 2 Types of neurons 2 Signals in the nervous system 14 2. 1 Action potentials as point events - point processes in the nervous system 15 18 2. 2 Spontaneous activi~ in neurons 3 Stochastic modelling of single neuron spike trains 19 3. 1 Characteristics of a neuron spike train 19 3. 2 The mathematical neuron 23 4 Superposition models 26 4. 1 superposition of renewal processes 26 4. 2 Superposition of stationary point processe- limiting behaviour 34 4. 2. 1 Palm functions 35 4. 2. 2 Asymptotic behaviour of n stationary point processes superposed 36 4. 3 Superposition models of neuron spike trains 37 4. 3. 1 Model 4. 1 39 4. 3. 2 Model 4. 2 - A superposition model with 40 two input channels 40 4. 3. 3 Model 4. 3 4. 4 Discussion 41 43 5 Deletion models 5. 1 Deletion models with 1nd~endent interaction of excitatory and inhibitory sequences 44 VI 5. 1. 1 Model 5. 1 The basic de...
Bifurcation analysis in single-species population model with delay
Institute of Scientific and Technical Information of China (English)
无
2010-01-01
A single-species population model is investigated in this paper.Firstly,we study the existence of Hopf bifurcation at the positive equilibrium.Furthermore,an explicit algorithm for determining the direction of the Hopf bifurcation and stability of the bifurcation periodic solutions are derived by using the normal form and the center manifold theory.At last,numerical simulations to support the analytical conclusions are carried out.
Unified Model of Dynamic Forced Barrier Crossing in Single Molecules
Energy Technology Data Exchange (ETDEWEB)
Friddle, R W
2007-06-21
Thermally activated barrier crossing in the presence of an increasing load can reveal kinetic rate constants and energy barrier parameters when repeated over a range of loading rates. Here we derive a model of the mean escape force for all relevant loading rates--the complete force spectrum. Two well-known approximations emerge as limiting cases; one of which confirms predictions that single-barrier spectra should converge to a phenomenological description in the slow loading limit.
An atomic model for neutral and singly ionized uranium
Maceda, E. L.; Miley, G. H.
1979-01-01
A model for the atomic levels above ground state in neutral, U(0), and singly ionized, U(+), uranium is described based on identified atomic transitions. Some 168 states in U(0) and 95 in U(+) are found. A total of 1581 atomic transitions are used to complete this process. Also discussed are the atomic inverse lifetimes and line widths for the radiative transitions as well as the electron collisional cross sections.
Convection in a Single Column -- Modelling, Algorithm and Analysis
Bokhove, Onno; Dedner, Andreas; Esler, Gavin; Norbury, John; Turner, Matthew R; Vanneste, Jacques; Cullen, Mike
2016-01-01
The group focused on a model problem of idealised moist air convection in a single column of atmosphere. Height, temperature and moisture variables were chosen to simplify the mathematical representation (along the lines of the Boussinesq approximation in a height variable defined in terms of pressure). This allowed exact simple solutions of the numerical and partial differential equation problems to be found. By examining these, we identify column behaviour, stability issues and explore the feasibility of a more general solution process.
Kumar, P.; Wiltshire, A.; Asharaf, S.; Ahrens, B.; Lucas-Picher, P.; Christensen, J. H.; Gobiet, A.; Saeed, F.; Hagemann, S.; Jacob, D.
2011-12-01
This study presents the possible regional climate change over SA with a focus over India as simulated by three very-high-resolution regional climate models. The models are driven by the same lateral boundary conditions from two global models (ECHAM5-MPIOM and HadCM3) under the IPCC AR4 SRES A1B scenario at horizontal resolution of ~25km, except one model which is simulated for only one GCM. The results are presented for two time slices 2021-2050 and 2070-2099. The analysis concentrates along precipitation and temperature over land and focuses mainly on the monsoon season. The circulation parameter is also discussed. In general all models show a clear signal of gradual wide-spread warming throughout the 21st century. The ensemble-mean warming evident at the end of 2050 is 1-2K, whereas it is 3-5K at the end of century. The projected pattern of the precipitation change shows spatial variability. The increase in precipitation is noticed over peninsular and coastal areas and no change or decrease over areas away from the ocean. The influence of the driving GCM on projected precipitation change simulated with each RCM is as strong as the variability among the RCMs driven with one GCM. Some results of the first uncertainties assessment are also presented.
Directory of Open Access Journals (Sweden)
Rutao Luo
Full Text Available Mathematical models based on ordinary differential equations (ODE have had significant impact on understanding HIV disease dynamics and optimizing patient treatment. A model that characterizes the essential disease dynamics can be used for prediction only if the model parameters are identifiable from clinical data. Most previous parameter identification studies for HIV have used sparsely sampled data from the decay phase following the introduction of therapy. In this paper, model parameters are identified from frequently sampled viral-load data taken from ten patients enrolled in the previously published AutoVac HAART interruption study, providing between 69 and 114 viral load measurements from 3-5 phases of viral decay and rebound for each patient. This dataset is considerably larger than those used in previously published parameter estimation studies. Furthermore, the measurements come from two separate experimental conditions, which allows for the direct estimation of drug efficacy and reservoir contribution rates, two parameters that cannot be identified from decay-phase data alone. A Markov-Chain Monte-Carlo method is used to estimate the model parameter values, with initial estimates obtained using nonlinear least-squares methods. The posterior distributions of the parameter estimates are reported and compared for all patients.
Kinetic modelling of anaerobic hydrolysis of solid wastes, including disintegration processes
Energy Technology Data Exchange (ETDEWEB)
García-Gen, Santiago [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Sousbie, Philippe; Rangaraj, Ganesh [INRA, UR50, Laboratoire de Biotechnologie de l’Environnement, Avenue des Etangs, Narbonne F-11100 (France); Lema, Juan M. [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Rodríguez, Jorge, E-mail: jrodriguez@masdar.ac.ae [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Institute Centre for Water and Environment (iWater), Masdar Institute of Science and Technology, PO Box 54224 Abu Dhabi (United Arab Emirates); Steyer, Jean-Philippe; Torrijos, Michel [INRA, UR50, Laboratoire de Biotechnologie de l’Environnement, Avenue des Etangs, Narbonne F-11100 (France)
2015-01-15
Highlights: • Fractionation of solid wastes into readily and slowly biodegradable fractions. • Kinetic coefficients estimation from mono-digestion batch assays. • Validation of kinetic coefficients with a co-digestion continuous experiment. • Simulation of batch and continuous experiments with an ADM1-based model. - Abstract: A methodology to estimate disintegration and hydrolysis kinetic parameters of solid wastes and validate an ADM1-based anaerobic co-digestion model is presented. Kinetic parameters of the model were calibrated from batch reactor experiments treating individually fruit and vegetable wastes (among other residues) following a new protocol for batch tests. In addition, decoupled disintegration kinetics for readily and slowly biodegradable fractions of solid wastes was considered. Calibrated parameters from batch assays of individual substrates were used to validate the model for a semi-continuous co-digestion operation treating simultaneously 5 fruit and vegetable wastes. The semi-continuous experiment was carried out in a lab-scale CSTR reactor for 15 weeks at organic loading rate ranging between 2.0 and 4.7 g VS/L d. The model (built in Matlab/Simulink) fit to a large extent the experimental results in both batch and semi-continuous mode and served as a powerful tool to simulate the digestion or co-digestion of solid wastes.
A void ratio dependent water retention curve model including hydraulic hysteresis
Directory of Open Access Journals (Sweden)
Pasha Amin Y.
2016-01-01
Full Text Available Past experimental evidence has shown that Water Retention Curve (WRC evolves with mechanical stress and structural changes in soil matrix. Models currently available in the literature for capturing the volume change dependency of WRC are mainly empirical in nature requiring an extensive experimental programme for parameter identification which renders them unsuitable for practical applications. In this paper, an analytical model for the evaluation of the void ratio dependency of WRC in deformable porous media is presented. The approach proposed enables quantification of the dependency of WRC on void ratio solely based on the form of WRC at the reference void ratio and requires no additional parameters. The effect of hydraulic hysteresis on the evolution process is also incorporated in the model, an aspect rarely addressed in the literature. Expressions are presented for the evolution of main and scanning curves due to loading and change in the hydraulic path from scanning to main wetting/drying and vice versa as well as the WRC parameters such as air entry value, air expulsion value, pore size distribution index and slope of the scanning curve. The model is validated using experimental data on compacted and reconstituted soils subjected to various hydro-mechanical paths. Good agreement is obtained between model predictions and experimental data in all the cases considered.
Dörr, Aaron; Mehdizadeh, Amirfarhang
2012-01-01
Based on the notion of a construction process consisting of the stepwise addition of particles to the pure fluid, a discrete model for the apparent viscosity as well as for the maximum packing fraction of polydisperse suspensions of spherical, non-colloidal particles is derived. The model connects the approaches by Bruggeman and Farris and is valid for large size ratios of consecutive particle classes during the construction process. Furthermore, a new general form of the well-known Krieger equation allowing for the choice of a second-order Taylor coefficient for the volume fraction is proposed and then applied as a monodisperse reference equation in the course of polydisperse modeling. By applying the polydisperse viscosity model to two different particle size distributions (Rosin-Rammler and uniform distribution), the influence of polydispersity on the apparent viscosity is examined. The extension of the model to the case of small size ratios as well as to the inclusion of shear rate effects is left for fut...
Complete Loss and Thermal Model of Power Semiconductors Including Device Rating Information
DEFF Research Database (Denmark)
Ma, Ke; Bahman, Amir Sajjad; Beczkowski, Szymon;
2015-01-01
loading but also the device rating as input variables. The quantified correlation between the power loss, thermal impedance and silicon area of Insulated Gate Bipolar Transistor (IGBT) is mathematically established. By this new modeling approach, all factors that have impacts to the loss and thermal......Thermal loading of power devices are closely related to the reliability performance of the whole converter system. The electrical loading and device rating are both important factors that determine the loss and thermal behaviors of power semiconductor devices. In the existing loss and thermal...... models, only the electrical loadings are focused and treated as design variables, while the device rating is normally pre-defined by experience with limited design flexibility. Consequently, a more complete loss and thermal model is proposed in this paper, which takes into account not only the electrical...
A Simple Model of Fields Including the Strong or Nuclear Force and a Cosmological Speculation
Directory of Open Access Journals (Sweden)
David L. Spencer
2016-10-01
Full Text Available Reexamining the assumptions underlying the General Theory of Relativity and calling an object's gravitational field its inertia, and acceleration simply resistance to that inertia, yields a simple field model where the potential (kinetic energy of a particle at rest is its capacity to move itself when its inertial field becomes imbalanced. The model then attributes electromagnetic and strong forces to the effects of changes in basic particle shape. Following up on the model's assumption that the relative intensity of a particle's gravitational field is always inversely related to its perceived volume and assuming that all black holes spin, may create the possibility of a cosmic rebound where a final spinning black hole ends with a new Big Bang.
Energy Technology Data Exchange (ETDEWEB)
Chortis, D I; Chrysochoidis, N A; Saravanos, D A [Department of Mechanical Engineering and Aeronautics, University of Patras, Patras 26500 (Greece)
2007-07-15
The paper presents a brief description of composite damping mechanics for blade sections of arbitrary lamination and geometry. A damped 3-D shear beam element is presented enabling the assembly of damped structural dynamic models of blades with hollow multi-cell tubular laminated sections. Emphasis is placed to the inclusion of composite material coupling effects, first in the blade section stiffness and damping matrices and finally into the stiffness and damping matrices of the finite element. Evaluations of the beam element are presented, to quantify the material coupling effect on composite beams of simple box sections. Correlations between predicted and measured modal frequencies and damping values in small model Glass/Epoxy are also shown. Finally, the damped modal characteristics of a 35m realistic wind-turbine blade model design, are predicted.
A study of a hamiltonian model for martensitic phase transformations including microkinetic energy
Theil, F
1998-01-01
How can a system in a macroscopically stable state explore energetically more favorable states, which are far away from the current equilibrium state? Based on continuum mechanical considerations we derive a Boussinesq-type equation which models the dynamics of martensitic phase transformations. The solutions of the system, which we refer to as microkinetically regularized wave equation exhibit strong oscillations after short times, thermalization can be confirmed. That means that macroscopic fluctuations of the solutions decay at the benefit of microscopic fluctuations. First analytical and numerical results on the propagation of phase boundaries and thermalization effects are presented. Despite the fact that model is conservative, it exhibits the hysteretic behavior. Such a behavior is usually interpreted in macroscopic models in terms of dissipative threshold which the driving force has to overcome to ensure that the phase transformation proceeds. The threshold value depends on the amount of the transforme...
Hybrid Model Representation of a TLP Including Flexible Topsides in Non-Linear Regular Waves
Directory of Open Access Journals (Sweden)
Christof Wehmeyer
2014-08-01
Full Text Available The rising demand for renewable energy solutions is forcing the established industries to expand and continue evolving. For the wind energy sector, the vast resources in deep sea locations have encouraged research towards the installation of turbines in deeper waters. One of the most promising technologies able to solve this challenge is the floating wind turbine foundation. For the ultimate limit state, where higher order wave loads have a significant influence, a design tool that couples non-linear excitations with structural dynamics is required. To properly describe the behavior of such a structure, a numerical model is proposed and validated by physical test results. The model is applied to a case study of a tension leg platform with a flexible topside mimicking the tower and a lumped mass mimicking the rotor-nacelle assembly. The model is additionally compared to current commercial software, where the need for the coupled higher order dynamics proposed in this paper becomes evident.
Loss and thermal model for power semiconductors including device rating information
DEFF Research Database (Denmark)
Ma, Ke; Bahman, Amir Sajjad; Beczkowski, Szymon;
2014-01-01
The electrical loading and device rating are both important factors that determine the loss and thermal behaviors of power semiconductor devices. In the existing loss and thermal models, only the electrical loadings are focused and treated as design variables, while the device rating is normally...... pre-defined by experience with poor design flexibility. Consequently a more complete loss and thermal model is proposed in this paper, which takes into account not only the electrical loading but also the device rating as input variables. The quantified correlation between the power loss, thermal...... impedance and silicon area of Insulated Gate Bipolar Transistor (IGBT) is mathematically established. By this new modeling approach, all factors that have impacts to the loss and thermal profiles of power devices can be accurately mapped, enabling more design freedom to optimize the efficiency and thermal...
Complete Loss and Thermal Model of Power Semiconductors Including Device Rating Information
DEFF Research Database (Denmark)
Ma, Ke; Bahman, Amir Sajjad; Beczkowski, Szymon
2015-01-01
profiles of the power devices can accurately be mapped, enabling more design freedom to optimize the efficiency and thermal loading of the power converter. The proposed model can be further improved by experimental tests, and it is well agreed by both circuit and Finite Element Method (FEM) simulation......Thermal loading of power devices are closely related to the reliability performance of the whole converter system. The electrical loading and device rating are both important factors that determine the loss and thermal behaviors of power semiconductor devices. In the existing loss and thermal...... models, only the electrical loadings are focused and treated as design variables, while the device rating is normally pre-defined by experience with limited design flexibility. Consequently, a more complete loss and thermal model is proposed in this paper, which takes into account not only the electrical...
Loss and thermal model for power semiconductors including device rating information
DEFF Research Database (Denmark)
Ma, Ke; Bahman, Amir Sajjad; Beczkowski, Szymon
2014-01-01
impedance and silicon area of Insulated Gate Bipolar Transistor (IGBT) is mathematically established. By this new modeling approach, all factors that have impacts to the loss and thermal profiles of power devices can be accurately mapped, enabling more design freedom to optimize the efficiency and thermal......The electrical loading and device rating are both important factors that determine the loss and thermal behaviors of power semiconductor devices. In the existing loss and thermal models, only the electrical loadings are focused and treated as design variables, while the device rating is normally...... pre-defined by experience with poor design flexibility. Consequently a more complete loss and thermal model is proposed in this paper, which takes into account not only the electrical loading but also the device rating as input variables. The quantified correlation between the power loss, thermal...
Groleau, Julie; Marecaux, Christophe; Payrard, Natacha; Segaud, Brice; Rochette, Michel; Perrier, Pascal; Payan, Yohan
2008-01-01
A 3D biomechanical finite element model of the face is presented. Muscles are represented by piece-wise uniaxial tension cable elements linking the insertion points. Such insertion points are specific entities differing from nodes of the finite element mesh, which makes possible to change either the mesh or the muscle implementation totally independently of each other. Lip/teeth and upper lip/lower lip contacts are also modeled. Simulations of smiling and of an Orbicularis Oris activation are presented and interpreted. The importance of a proper account of contacts and of an accurate anatomical description is shown
European air quality modelled by CAMx including the volatility basis set scheme
Directory of Open Access Journals (Sweden)
G. Ciarelli
2015-12-01
Full Text Available Four periods of EMEP (European Monitoring and Evaluation Programme intensive measurement campaigns (June 2006, January 2007, September–October 2008 and February–March 2009 were modelled using the regional air quality model CAMx with VBS (Volatility Basis Set approach for the first time in Europe within the framework of the EURODELTA-III model intercomparison exercise. More detailed analysis and sensitivity tests were performed for the period of February–March 2009 and June 2006 to investigate the uncertainties in emissions as well as to improve the modelling of organic aerosols (OA. Model performance for selected gas phase species and PM2.5 was evaluated using the European air quality database Airbase. Sulfur dioxide (SO2 and ozone (O3 were found to be overestimated for all the four periods with O3 having the largest mean bias during June 2006 and January–February 2007 periods (8.93 and 12.30 ppb mean biases, respectively. In contrast, nitrogen dioxide (NO2 and carbon monoxide (CO were found to be underestimated for all the four periods. CAMx reproduced both total concentrations and monthly variations of PM2.5 very well for all the four periods with average biases ranging from −2.13 to 1.04 μg m-3. Comparisons with AMS (Aerosol Mass Spectrometer measurements at different sites in Europe during February–March 2009, showed that in general the model over-predicts the inorganic aerosol fraction and under-predicts the organic one, such that the good agreement for PM2.5 is partly due to compensation of errors. The effect of the choice of volatility basis set scheme (VBS on OA was investigated as well. Two sensitivity tests with volatility distributions based on previous chamber and ambient measurements data were performed. For February–March 2009 the chamber-case reduced the total OA concentrations by about 43 % on average. On the other hand, a test based on ambient measurement data increased OA concentrations by about 47 % for the same
Viscoelastic Model of Cross-Linked Polyethylene Including Effects of Temperature and Crystallinity
Olasz, L.; Gudmundson, P.
2005-12-01
Characterization of the mechanical behavior of cross-linked polyethylene (XLPE) commonly used in high voltage cable insulation was performed by an extensive set of isothermal uniaxial tensile relaxation tests. Tensile relaxation experiments were complemented by pressure-volume-temperature experiments as well as density and crystallinity measurements. Based on the experimental results, a viscoelastic power law model with four parameters was formulated, incorporating temperature and crystallinity dependence. It was found that a master curve can be developed by both horizontal and vertical shifting of the relaxation curves. The model was evaluated by making comparisons of the predicted stress responses with the measured responses in relaxation tests with transient temperature histories.
Modeling KIC10684673 and KIC12216817 as Single Pulsating Variables
Turner, Garrison
2016-01-01
The raw light curves of both KIC 10684673 and KIC 12216817 show variability. Both are listed in the Kepler Eclipsing Binary Catalog (hereafter KEBC), however both are flagged as uncertain in nature. In the present study we show their light curves can be modeled by considering each target as a single, multi-modal delta Scuti pulsator. While this does not exclude the possibility of eclipsing systems, we argue, while spectroscopy on the systems is still lacking, the delta Scuti model is a simpler explanation and therefore more probable.
Energy Technology Data Exchange (ETDEWEB)
Darcel, C. (Itasca Consultants SAS (France)); Davy, P.; Le Goc, R.; Dreuzy, J.R. de; Bour, O. (Geosciences Rennes, UMR 6118 CNRS, Univ. def Rennes, Rennes (France))
2009-11-15
the lineament scale (k{sub t} = 2) on the other, addresses the issue of the nature of the transition. We develop a new 'mechanistic' model that could help in modeling why and where this transition can occur. The transition between both regimes would occur for a fracture length of 1-10 m and even at a smaller scale for the few outcrops that follow the self-similar density model. A consequence for the disposal issue is that the model that is likely to apply in the 'blind' scale window between 10-100 m is the self-similar model as it is defined for large-scale lineaments. The self-similar model, as it is measured for some outcrops and most lineament maps, is definitely worth being investigated as a reference for scales above 1-10 m. In the rest of the report, we develop a methodology for incorporating uncertainty and variability into the DFN modeling. Fracturing properties arise from complex processes which produce an intrinsic variability; characterizing this variability as an admissible variation of model parameter or as the division of the site into subdomains with distinct DFN models is a critical point of the modeling effort. Moreover, the DFN model encompasses a part of uncertainty, due to data inherent uncertainties and sampling limits. Both effects must be quantified and incorporated into the DFN site model definition process. In that context, all available borehole data including recording of fracture intercept positions, pole orientation and relative uncertainties are used as the basis for the methodological development and further site model assessment. An elementary dataset contains a set of discrete fracture intercepts from which a parent orientation/density distribution can be computed. The elementary bricks of the site, from which these initial parent density distributions are computed, rely on the former Single Hole Interpretation division of the boreholes into sections whose local boundaries are expected to reflect - locally - geology
Ng, Jonathan; Hakim, Ammar; Bhattacharjee, Amitava; Stanier, Adam; Daughton, William; Wang, Liang; Germaschewski, Kai
2015-01-01
As modeling of collisionless magnetic reconnection in most space plasmas with realistic parameters is beyond the capability of today's simulations, due to the separation between global and kinetic length scales, it is important to establish scaling relations in model problems so as to extrapolate to realistic scales. Recently, large scale particle-in-cell (PIC) simulations of island coalescence have shown that the time averaged reconnection rate decreases with system size, while fluid systems at such large scales in the Hall regime have not been studied. Here we perform the complementary resistive MHD, Hall MHD and two fluid simulations using a ten-moment model with the same geometry. In contrast to the standard Harris sheet reconnection problem, Hall MHD is insufficient to capture the physics of the reconnection region. Additionally, motivated by the results of a recent set of hybrid simulations which show the importance of ion kinetics in this geometry, we evaluate the efficacy of the ten-moment model in re...
Situational effects of the school factors included in the dynamic model of educational effectiveness
Creerners, Bert; Kyriakides, Leonidas
2009-01-01
We present results of a longitudinal study in which 50 schools, 113 classes and 2,542 Cypriot primary students participated. We tested the validity of the dynamic model of educational effectiveness and especially its assumption that the impact of school factors depends on the current situation of th
Gövert, S.; Mira, D.; Kok, J.B.W.; Vázquez, M.; Houzeaux, G.
2015-01-01
The present work addresses the coupling of a flamelet database, to a low-Mach approximation of the Navier–Stokes equations using scalar controlling variables. The model is characterized by the chemistry tabulation based on laminar premixed flamelets in combination with an optimal choice of the react
Kinetic modelling of anaerobic hydrolysis of solid wastes, including disintegration processes.
García-Gen, Santiago; Sousbie, Philippe; Rangaraj, Ganesh; Lema, Juan M; Rodríguez, Jorge; Steyer, Jean-Philippe; Torrijos, Michel
2015-01-01
A methodology to estimate disintegration and hydrolysis kinetic parameters of solid wastes and validate an ADM1-based anaerobic co-digestion model is presented. Kinetic parameters of the model were calibrated from batch reactor experiments treating individually fruit and vegetable wastes (among other residues) following a new protocol for batch tests. In addition, decoupled disintegration kinetics for readily and slowly biodegradable fractions of solid wastes was considered. Calibrated parameters from batch assays of individual substrates were used to validate the model for a semi-continuous co-digestion operation treating simultaneously 5 fruit and vegetable wastes. The semi-continuous experiment was carried out in a lab-scale CSTR reactor for 15 weeks at organic loading rate ranging between 2.0 and 4.7 gVS/Ld. The model (built in Matlab/Simulink) fit to a large extent the experimental results in both batch and semi-continuous mode and served as a powerful tool to simulate the digestion or co-digestion of solid wastes.
New phases in an extended Hubbard model explicitly including atomic polarizabilities
Brink, van de J.; Meinders, M.B.J.; Lorenzana, J.; Eder, R.; Sawatzky, G.A.
1996-01-01
We consider the influence of a nearest-neighbor Coulomb interaction in an extended Hubbard model and introduce a new interaction term which simulates atomic polarizabilities. This has the effect of screening the on-site Coulomb interaction for charged excitations, unlike a neighbor Coulomb interacti
Modeling of etch profile evolution including wafer charging effects using self consistent ion fluxes
Energy Technology Data Exchange (ETDEWEB)
Hoekstra, R.J.; Kushner, M.J. [Univ. of Illinois, Urbana, IL (United States). Dept. of Electrical and Computer Engineering
1996-12-31
As high density plasma reactors become more predominate in industry, the need has intensified for computer aided design tools which address both equipment issues such as ion flux uniformity onto the water and process issues such etch feature profile evolution. A hierarchy of models has been developed to address these issues with the goal of producing a comprehensive plasma processing design capability. The Hybrid Plasma Equipment Model (HPEM) produces ion and neutral densities, and electric fields in the reactor. The Plasma Chemistry Monte Carlo Model (PCMC) determines the angular and energy distributions of ion and neutral fluxes to the wafer using species source functions, time dependent bulk electric fields, and sheath potentials from the HPEM. These fluxes are then used by the Monte Carlo Feature Profile Model (MCFP) to determine the time evolution of etch feature profiles. Using this hierarchy, the effects of physical modifications of the reactor, such as changing wafer clamps or electrode structures, on etch profiles can be evaluated. The effects of wafer charging on feature evolution are examined by calculating the fields produced by the charge deposited by ions and electrons within the features. The effect of radial variations and nonuniformity in angular and energy distribution of the reactive fluxes on feature profiles and feature charging will be discussed for p-Si etching in inductively-coupled plasma (ICP) sustained in chlorine gas mixtures. The effects of over- and under-wafer topography on etch profiles will also be discussed.
Surface-wave mode coupling : modelling and inverting waveforms including body-wave phases
Marquering, H.A.
1996-01-01
This thesis is concerned with a similar problem as addressed by Li & Tanimoto (1993) in the surfacewave mode approach. In this thesis it is shown that surface-wave mode coupling is required when body-wave phases in laterally heterogeneous media are modelled by surface-wave mode summation. An efficie
Energy Technology Data Exchange (ETDEWEB)
Ng, Jonathan; Huang, Yi-Min; Hakim, Ammar; Bhattacharjee, A. [Center for Heliophysics, Princeton Plasma Physics Laboratory, Princeton, New Jersey 08540 (United States); Stanier, Adam; Daughton, William [Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States); Wang, Liang; Germaschewski, Kai [Space Science Center and Physics Department, University of New Hampshire, Durham, New Hampshire 03824 (United States)
2015-11-15
As modeling of collisionless magnetic reconnection in most space plasmas with realistic parameters is beyond the capability of today's simulations, due to the separation between global and kinetic length scales, it is important to establish scaling relations in model problems so as to extrapolate to realistic scales. Recently, large scale particle-in-cell simulations of island coalescence have shown that the time averaged reconnection rate decreases with system size, while fluid systems at such large scales in the Hall regime have not been studied. Here, we perform the complementary resistive magnetohydrodynamic (MHD), Hall MHD, and two fluid simulations using a ten-moment model with the same geometry. In contrast to the standard Harris sheet reconnection problem, Hall MHD is insufficient to capture the physics of the reconnection region. Additionally, motivated by the results of a recent set of hybrid simulations which show the importance of ion kinetics in this geometry, we evaluate the efficacy of the ten-moment model in reproducing such results.
DEFF Research Database (Denmark)
Rasmussen, Anders Rønne; Sørensen, Mads Peter; Gaididei, Yuri Borisovich
2010-01-01
A wave equation, that governs finite amplitude acoustic disturbances in a thermoviscous Newtonian fluid, and includes nonlinear terms up to second order, is proposed. The equation preserves the Hamiltonian structure of the fundamental fluid dynamical equations in the non dissipative limit. An exact...
A transient single particle model under FCI conditions
Institute of Scientific and Technical Information of China (English)
LI Xiao-Yan; SHANG Zhi; XU Ji-Jun
2005-01-01
The paper is focused on the coupling effect between film boiling heat transfer and evaporation drag around a hot-particle in cold liquid. Based on the continuity, momentum and energy equations of the vapor film, a transient two-dimensional single particle model has been established. This paper contains a detailed description of HPMC (High-temperature Particle Moving in Coolant) model for studying some aspects of the premixing stage of fuel-coolant interactions (FCIs). The transient process of high-temperature particles moving in coolant can be simulated. Comparisons between the experiment results and the calculations using HPMC model demonstrate that HPMC model achieves a good agreement in predicting the time-varying characteristic of high-temperature spheres moving in coolant.
Dynamic Human Body Modeling Using a Single RGB Camera
Directory of Open Access Journals (Sweden)
Haiyu Zhu
2016-03-01
Full Text Available In this paper, we present a novel automatic pipeline to build personalized parametric models of dynamic people using a single RGB camera. Compared to previous approaches that use monocular RGB images, our system can model a 3D human body automatically and incrementally, taking advantage of human motion. Based on coarse 2D and 3D poses estimated from image sequences, we first perform a kinematic classification of human body parts to refine the poses and obtain reconstructed body parts. Next, a personalized parametric human model is generated by driving a general template to fit the body parts and calculating the non-rigid deformation. Experimental results show that our shape estimation method achieves comparable accuracy with reconstructed models using depth cameras, yet requires neither user interaction nor any dedicated devices, leading to the feasibility of using this method on widely available smart phones.
Mechanistic modelling of the drying behaviour of single pharmaceutical granules
DEFF Research Database (Denmark)
Thérèse F.C. Mortier, Séverine; Beer, Thomas De; Gernaey, Krist
2012-01-01
The trend to move towards continuous production processes in pharmaceutical applications enhances the necessity to develop mechanistic models to understand and control these processes. This work focuses on the drying behaviour of a single wet granule before tabletting, using a six...... of b on the drying behaviour. Experimental data with the six-segmented fluidised bed dryer were collected to calibrate b. An exponential dependence on the drying air temperature was found. Independent experiments were done for the validation of the drying model.......-segmented fluidised bed drying system, which is part of a fully continuous from-powder-to-tablet manufacturing line. The drying model is based on a model described by Mezhericher et al. [1] and consists of two submodels. In the first drying phase (submodel 1), the surface water evaporates, while in the second drying...
Dynamic Human Body Modeling Using a Single RGB Camera.
Zhu, Haiyu; Yu, Yao; Zhou, Yu; Du, Sidan
2016-03-18
In this paper, we present a novel automatic pipeline to build personalized parametric models of dynamic people using a single RGB camera. Compared to previous approaches that use monocular RGB images, our system can model a 3D human body automatically and incrementally, taking advantage of human motion. Based on coarse 2D and 3D poses estimated from image sequences, we first perform a kinematic classification of human body parts to refine the poses and obtain reconstructed body parts. Next, a personalized parametric human model is generated by driving a general template to fit the body parts and calculating the non-rigid deformation. Experimental results show that our shape estimation method achieves comparable accuracy with reconstructed models using depth cameras, yet requires neither user interaction nor any dedicated devices, leading to the feasibility of using this method on widely available smart phones.
A model for heterogeneous traffic flows including non-motorized vehicles
Energy Technology Data Exchange (ETDEWEB)
Oketch, T.G.
2001-07-01
This study is concerned with developing a traffic flow and emissions model suitable for heterogeneous traffic streams containing motorised and non-motorised vehicles. Such streams contain vehicle types such as private cars, buses and trucks as well as bicycles, motorcycles and other vehicular forms. The model covers the different vehicle types and allows for peculiar behaviours prevalent in such streams. In addition to an existing deterministic car following rule, the model incorporates detailed lateral movement algorithm with gradual lane change manoeuvres, the decisions of which are governed by fuzzy logic rules. For determination of pollutant emissions, the travel lane was divided into finite elements and total emissions aggregated for each element depending on the vehicle speeds and types. A methodology for estimation of emission rates, based on vehicle maintenance history, for countries without reliable inventories was proposed and used to obtain emission coefficients of CO, HC, NOx and Pb emissions in Kenya. In conclusion, the model has demonstrated that heterogeneous traffic can be effectively analysed by approaches that take their peculiar characteristics into consideration. In addition, it has also provided new insight in the performance and emission patterns of heterogeneous traffic streams which can be used to formulate regulatory directives governing the usage of lanes or provision of auxiliary carriageways for slower vehicles. (orig.) [German] In dieser Arbeit wurde ein Verkehrsfluss- und Emissions-Model fuer heterogene Verkehrsstroeme entwickelt. Solche Verkehrsstroeme enthalten nicht nur motorisierte Fahrzeuge wie Pkw, Lkw, Omnibus, Motorrad usw. sondern auch nicht-motorisierte Fahrzeuge wie Fahrrad und auch besondere Fahrzeugtypen, die auf Motorraedern oder Fahrraedern basieren. Im Modell wurden auch die entsprechenden besonderen Verhaeltnisse dieser Fahrzeugtypen beruecksichtigt. Die Bewegung von Fahrzeugen wurde in zwei Dimensionen modelliert. Auf
Energy Technology Data Exchange (ETDEWEB)
Griffin, J. J.; Lichtner, P. C.; Dworzecka, M.; Kan, K. K.
1979-01-01
The restrictions implied for the time dependent many-body reaction theory by the (TDHF) single determinantal assumption are explored by constructive analysis. A restructured TD-S-HF reaction theory is modelled, not after the initial-value form of the Schroedinger reaction theory, but after the (fully equivalent) S-matrix form, under the conditions that only self-consistent TDHF solutions occur in the theory, every wave function obeys the fundamental statistical interpretation of quantum mechanics, and the theory reduces to the exact Schroedinger theory for exact solutions which are single determinantal. All of these conditions can be accomodated provided that the theory is interpreted on a time-averaged basis, i.e., physical constants of the Schroedinger theory which are time-dependent in the TDHF theory, are interpreted in TD-S-HF in terms of their time averaged values. The resulting reaction theory, although formulated heuristically, prescribes a well defined and unambiguous calculational program which, although somewhat more demanding technically than the conventional initial-value TDHF method, is nevertheless more consonant with first principles, structurally and mechanistically. For its physical predictions do not depend upon the precise location of the distant measuring apparatus, and are in no way influenced by the spurious cross channel correlations which arise whenever the description of many reaction channels is imposed upon one single-determinantal solution. For nuclear structure physics, the TDHF-eigenfunctions provide the first plausible description of exact eigenstates in the time-dependent framework; moreover, they are unencumbered by any restriction to small amplitudes. 14 references.
DEFF Research Database (Denmark)
Bollerslev, Tim; Andersen, Torben G.; Diebold, Francis X.
A rapidly growing literature has documented important improvements in financial return volatility measurement and forecasting via use of realized variation measures constructed from high-frequency returns coupled with simple modeling procedures. Building on recent theoretical results in Barndorff...... bond yield, we find that jumps are both highly prevalent and distinctly less persistent than the continuous sample path variation process. Moreover, many jumps appear directly associated with specific macroeconomic news announcements. Separating jump from non-jump movements in a simple...... but sophisticated volatility forecasting model, we find that almost all of the predictability in daily, weekly, and monthly return volatilities comes from the non-jump component. Our results thus set the stage for a number of interesting future econometric developments and important financial applications...
Lüdde, H. J.; Achenbach, A.; Kalkbrenner, T.; Jankowiak, H. C.; Kirchner, T.
2016-05-01
A recently introduced model to account for geometric screening corrections in an independent-atom-model description of ion-molecule collisions is applied to proton collisions from amino acids and DNA and RNA nucleobases. The correction coefficients are obtained from using a pixel counting method (PCM) for the exact calculation of the effective cross sectional area that emerges when the molecular cross section is pictured as a structure of (overlapping) atomic cross sections. This structure varies with the relative orientation of the molecule with respect to the projectile beam direction and, accordingly, orientation-independent total cross sections are obtained from averaging the pixel count over many orientations. We present net capture and net ionization cross sections over wide ranges of impact energy and analyze the strength of the screening effect by comparing the PCM results with Bragg additivity rule cross sections and with experimental data where available. Work supported by NSERC, Canada.
Benzekry, Sebastien
2010-01-01
Angiogenesis is a key process in the tumoral growth which allows the cancerous tissue to impact on its vasculature in order to improve the nutrient's supply and the metastatic process. In this paper, we introduce a model for the density of metastasis which takes into account for this feature. It is a two dimensional structured equation with a vanishing velocity field and a source term on the boundary. We present here the mathematical analysis of the model, namely the well-posedness of the equation and the asymptotic behavior of the solutions, whose natural regularity led us to investigate some basic properties of the space $\\Wd(\\Om)=\\{V\\in L^1;\\;\\div(GV)\\in L^1\\}$, where $G$ is the velocity field of the equation.
A model for thermal oxidation of Si and SiC including material expansion
Energy Technology Data Exchange (ETDEWEB)
Christen, T., E-mail: thomas.christen@ch.abb.com; Ioannidis, A. [ABB Corporate Research, Segelhofstrasse 1K, CH-5405 Baden (Switzerland); Winkelmann, C. [ETH Zürich, Seminar for Applied Mathematics, Rämistrasse 101, CH-8092 Zürich (Switzerland)
2015-02-28
A model based on drift-diffusion-reaction kinetics for Si and SiC oxidation is discussed, which takes the material expansion into account with an additional convection term. The associated velocity field is determined self-consistently from the local reaction rate. The approach allows a calculation of the densities of volatile species in an nm-resolution at the oxidation front. The model is illustrated with simulation results for the growth and impurity redistribution during Si oxidation and for carbon and silicon emission during SiC oxidation. The approach can be useful for the prediction of Si and/or C interstitial distribution, which is particularly relevant for the quality of metal-oxide-semiconductor electronic devices.
A roller chain drive model including contact with guide-bars
DEFF Research Database (Denmark)
Pedersen, Sine Leergaard; Hansen, John Michael; Ambrósio, J. A. C.
2004-01-01
and continuous force methods, respectively. In the unilateral constraint methodology the kinematic constraints are introduced in the system anytime a contact between the rollers and the sprockets is detected. The condition for the constraint addition is based on the relative distance between the roller centre...... and the sprocket centre, i.e. a constraint is added when such distance is less than the pitch radius. The unilateral kinematic constraint is removed when its associated constraint reaction force, applied on the roller, is in the direction of the root of the sprocket teeth. In order to improve the numerical...... as continuous force. The model of the roller-chain drive now proposed departs from an earlier model where two contact/impact methods are proposed to describe the contact between the rollers of the chain and the teeth of the sprockets. These different formulations are based on unilateral constraints...
DEFF Research Database (Denmark)
Bollerslev, Tim; Andersen, Torben G.; Diebold, Francis X.
-Nielsen and Shephard (2004a, 2005) for related bi-power variation measures, the present paper provides a practical and robust framework for non-parametrically measuring the jump component in asset return volatility. In an application to the DM/$ exchange rate, the S&P500 market index, and the 30-year U.S. Treasury......A rapidly growing literature has documented important improvements in financial return volatility measurement and forecasting via use of realized variation measures constructed from high-frequency returns coupled with simple modeling procedures. Building on recent theoretical results in Barndorff...... but sophisticated volatility forecasting model, we find that almost all of the predictability in daily, weekly, and monthly return volatilities comes from the non-jump component. Our results thus set the stage for a number of interesting future econometric developments and important financial applications...
Energy Technology Data Exchange (ETDEWEB)
Frankowski, Marek, E-mail: mfrankow@agh.edu.pl; Czapkiewicz, Maciej; Skowronski, Witold; Stobiecki, Tomasz
2014-02-15
We present a model introducing the Landau–Lifshitz–Gilbert equation with a Slonczewski's Spin-Transfer-Torque (STT) component in order to take into account spin polarized current influence on the magnetization dynamics, which was developed as an Object Oriented MicroMagnetic Framework extension. We implement the following computations: magnetoresistance of vertical channels is calculated from the local spin arrangement, local current density is used to calculate the in-plane and perpendicular STT components as well as the Oersted field, which is caused by the vertical current flow. The model allows for an analysis of all listed components separately, therefore, the contribution of each physical phenomenon in dynamic behavior of Magnetic Tunnel Junction (MTJ) magnetization is discussed. The simulated switching voltage is compared with the experimental data measured in MTJ nanopillars.
Institute of Scientific and Technical Information of China (English)
郭金运; 陶华学
2003-01-01
In order to process different kinds of observing data with different precisions, a new solution model of nonlinear dynamic integral least squares adjustment was put forward, which is not dependent on their derivatives. The partial derivative of each component in the target function is not computed while iteratively solving the problem. Especially when the nonlinear target function is more complex and very difficult to solve the problem, the method can greatly reduce the computing load.
Ricks, Trenton M.; Lacy, Thomas E., Jr.; Bednarcyk, Brett A.; Arnold, Steven M.; Hutchins, John W.
2014-01-01
A multiscale modeling methodology was developed for continuous fiber composites that incorporates a statistical distribution of fiber strengths into coupled multiscale micromechanics/finite element (FE) analyses. A modified two-parameter Weibull cumulative distribution function, which accounts for the effect of fiber length on the probability of failure, was used to characterize the statistical distribution of fiber strengths. A parametric study using the NASA Micromechanics Analysis Code with the Generalized Method of Cells (MAC/GMC) was performed to assess the effect of variable fiber strengths on local composite failure within a repeating unit cell (RUC) and subsequent global failure. The NASA code FEAMAC and the ABAQUS finite element solver were used to analyze the progressive failure of a unidirectional SCS-6/TIMETAL 21S metal matrix composite tensile dogbone specimen at 650 degC. Multiscale progressive failure analyses were performed to quantify the effect of spatially varying fiber strengths on the RUC-averaged and global stress-strain responses and failure. The ultimate composite strengths and distribution of failure locations (predominately within the gage section) reasonably matched the experimentally observed failure behavior. The predicted composite failure behavior suggests that use of macroscale models that exploit global geometric symmetries are inappropriate for cases where the actual distribution of local fiber strengths displays no such symmetries. This issue has not received much attention in the literature. Moreover, the model discretization at a specific length scale can have a profound effect on the computational costs associated with multiscale simulations.models that yield accurate yet tractable results.
A quark model calculation of yy->pipi including final-state interactions
Blundell, H G; Hay, G; Swanso, E
2000-01-01
A quark model calculation of the processes yy->pi+pi- and yy->pipi is performed. At tree level, only charged pions couple to the initial state photons and neutral pions are not exceeded in the final state. However a small but significant cross section is observed. We demonstrate that this may be accounted for by a rotation in isospin space induced by final-state interactions.
2011-03-01
Hypothesized that snow plows wear down mountain road pavement markings. 2007 Craig et al. -Edge lines degrade slower than center/skip lines 2007...retroreflectivity to create the models. They discovered that paint pavement markings last 80% longer on Portland Cement Concrete than Asphalt Concrete at low AADT...retroreflectivity, while yellow markings lost 21%. Lu and Barter attributed the sizable degradation to snow removal, sand application, and studded
Energy Technology Data Exchange (ETDEWEB)
Seiler, J.M.; Bonnet, J.M.; Bernaz, L. [CEA Grenoble (France)
2001-07-01
Extensive studies have been performed to investigate the heat transfer within a molten corium pool (homogeneous, stratified and with miscibility gap): Synthesis of heat transfer correlations in molten pool (homogeneous and stratified), Focusing effect in stratified metal layer, DNS analysis of Rayleigh Benard instabilities at the top boundary; interpretation of the different convection regimes and exponents affecting the Rayleigh number in the heat transfer correlations, Molten pool model for corium presenting a miscibility gap. Condition for de-stratification. (authors)
Modeling the Corona and Solar Wind using ADAPT Maps that Include Far-Side Observations
2013-11-01
document for any purpose other than Government procurement does not in any way obligate the U.S. Government. The fact that the Government formulated...Government’s approval or disapproval of its ideas or findings. Approved for public release; distribution is unlimited. REPORT DOCUMENTATION PAGE...Los Alamos National Laboratory ( LANL ) and the National Solar Observatory (NSO), has developed a model that produces more realistic estimates of the
Numerical modelling of the transport of trace gases including methane in the subsurface of Mars
Stevens, Adam H.; Patel, Manish R.; Lewis, Stephen R.
2015-04-01
We model the transport of gas through the martian subsurface in order to quantify the timescales of release of a trace gas with a source at depth using a Fickian model of diffusion through a putative martian regolith column. The model is then applied to the case of methane to determine if diffusive transport of gas can explain previous observations of methane in the martian atmosphere. We investigate which parameters in the model have the greatest effect on transport timescales and show that the calculated diffusivity is very sensitive to the pressure profile of the subsurface, but relatively insensitive to the temperature profile, though diffusive transport may be affected by other temperature dependent properties of the subsurface such as the local vapour pressure. Uncertainties in the structure and physical conditions of the martian subsurface also introduce uncertainties in the timescales calculated. It was found that methane may take several hundred thousand Mars-years to diffuse from a source at depth. Purely diffusive transport cannot explain transient release that varies on timescales of less than one martian year from sources such as serpentinization or methanogenic organisms at depths of more than 2 km. However, diffusion of gas released by the destabilisation of methane clathrate hydrates close to the surface, for example caused by transient mass wasting events or erosion, could produce a rapidly varying flux of methane into the atmosphere of more than 10-3 kg m-2 s-1 over a duration of less than half a martian year, consistent with observations of martian methane variability. Seismic events, magmatic intrusions or impacts could also potentially produce similar patterns of release, but are far more complex to simulate.
Numerical modeling of shallow flows including bottom topography and friction effects
Lukácová-Medvid'ová, Maria
2004-01-01
The aim of the paper is numerical modeling of the shallow water equation with source terms by genuinely multdimensional finite volume evolution Galerkin schemes. The shallow water system, or its one-dimensional analogy the Saint-Venant equation, is used extensively for numerical simulation of natural rivers. Mathematically the shallow water system belongs to the class of balance laws. A special treatment of the source terms describing the bottom topography as well as frictions effects is nece...
A numerical model of the ionosphere, including the E-region above EISCAT
Directory of Open Access Journals (Sweden)
P.-Y. Diloy
Full Text Available It has been previously demonstrated that a two-ion (O^{+} and H^{+} 8-moment time-dependent fluid model was able to reproduce correctly the ionospheric structure in the altitude range probed by the EISCAT-VHF radar. In the present study, the model is extended down to the E-region where molecular ion chemistry (NO^{+} and O^{+}_{2}, essentially prevails over transport; EISCAT-UHF observations confirmed previous theoretical predictions that during events of intense E×B induced convection drifts, molecular ions (mainly NO^{+} predominate over O^{+} ions up to altitudes of 300 km. In addition to this extension of the model down to the E-region, the ionization and heating resulting from both solar insolation and particle precipitation is now taken into account in a consistent manner through a complete kinetic transport code. The effects of E×B induced convection drifts on the E- and F-region are presented: the balance between O^{+} and NO^{+} ions is drastically affected; the electric field acts to deplete the O^{+} ion concentration. The [NO^{+}]/[O^{+}] transition altitude varies from 190 km to 320 km as the perpendicular electric field increases from 0 to 100 mV m^{-1}. An interesting additional by-product of the model is that it also predicts the presence of a noticeable fraction of N^{+} ions in the topside ionosphere in good agreement with Retarding Ion Mass Spectrometer measurements onboard Dynamic Explorer.
Kinetic model of water disinfection using peracetic acid including synergistic effects.
Flores, Marina J; Brandi, Rodolfo J; Cassano, Alberto E; Labas, Marisol D
2016-01-01
The disinfection efficiencies of a commercial mixture of peracetic acid against Escherichia coli were studied in laboratory scale experiments. The joint and separate action of two disinfectant agents, hydrogen peroxide and peracetic acid, were evaluated in order to observe synergistic effects. A kinetic model for each component of the mixture and for the commercial mixture was proposed. Through simple mathematical equations, the model describes different stages of attack by disinfectants during the inactivation process. Based on the experiments and the kinetic parameters obtained, it could be established that the efficiency of hydrogen peroxide was much lower than that of peracetic acid alone. However, the contribution of hydrogen peroxide was very important in the commercial mixture. It should be noted that this improvement occurred only after peracetic acid had initiated the attack on the cell. This synergistic effect was successfully explained by the proposed scheme and was verified by experimental results. Besides providing a clearer mechanistic understanding of water disinfection, such models may improve our ability to design reactors.
Directory of Open Access Journals (Sweden)
Mirka Mobilia
2017-01-01
Full Text Available In the last decades, there has been a widespread implementation of Green Infrastructures worldwide. Among these, green roofs appear to be particularly flexible sustainable drainage facilities. To predict their effectiveness for planning purposes, a tool is required that provides information as a function of local meteorological variables. Thus, a relatively simple daily scale, one-dimensional water balance approach has been proposed. The crucial evapotranspiration process, usually considered as a water balance dependent variable, is replaced here by empirical relationships providing an a-priori assessment of soil water losses through actual evapotranspiration. The modelling scheme, which under some simplification can be used without a calibration process, has been applied to experimental runoff data monitored at a green roof located near Bernkastel (Germany, between April 2005 and December 2006. Two different empirical relationships have been used to model actual evapotranspiration, considering a water availability limited and an energy limited scheme. Model errors quantification, ranging from 2% to 40% on the long-term scale and from 1% to 36% at the event scale, appear strongly related to the particularly considered relationship.
Campbell, C. L.; Brown, C. T. A.; Wood, K.; Moseley, H.
2016-11-01
Most existing theoretical models of photodynamic therapy (PDT) assume a uniform initial distribution of the photosensitive molecule, Protoporphyrin IX (PpIX). This is an adequate assumption when the prodrug is systematically administered; however for topical PDT this is no longer a valid assumption. Topical application and subsequent diffusion of the prodrug results in an inhomogeneous distribution of PpIX, especially after short incubation times, prior to light illumination. In this work a theoretical simulation of PDT where the PpIX distribution depends on the incubation time and the treatment modality is described. Three steps of the PpIX production are considered. The first is the distribution of the topically applied prodrug, the second in the conversion from the prodrug to PpIX and the third is the light distribution which affects the PpIX distribution through photobleaching. The light distribution is modelled using a Monte Carlo radiation transfer model and indicates treatment depths of around 2 mm during daylight PDT and approximately 3 mm during conventional PDT. The results suggest that treatment depths are not only limited by the light penetration but also by the PpIX distribution.
A stepped leader model for lightning including charge distribution in branched channels
Energy Technology Data Exchange (ETDEWEB)
Shi, Wei; Zhang, Li [School of Electrical Engineering, Shandong University, Jinan 250061 (China); Li, Qingmin, E-mail: lqmeee@ncepu.edu.cn [Beijing Key Lab of HV and EMC, North China Electric Power University, Beijing 102206 (China); State Key Lab of Alternate Electrical Power System with Renewable Energy Sources, Beijing 102206 (China)
2014-09-14
The stepped leader process in negative cloud-to-ground lightning plays a vital role in lightning protection analysis. As lightning discharge usually presents significant branched or tortuous channels, the charge distribution along the branched channels and the stochastic feature of stepped leader propagation were investigated in this paper. The charge density along the leader channel and the charge in the leader tip for each lightning branch were approximated by introducing branch correlation coefficients. In combination with geometric characteristics of natural lightning discharge, a stochastic stepped leader propagation model was presented based on the fractal theory. By comparing simulation results with the statistics of natural lightning discharges, it was found that the fractal dimension of lightning trajectory in simulation was in the range of that observed in nature and the calculation results of electric field at ground level were in good agreement with the measurements of a negative flash, which shows the validity of this proposed model. Furthermore, a new equation to estimate the lightning striking distance to flat ground was suggested based on the present model. The striking distance obtained by this new equation is smaller than the value estimated by previous equations, which indicates that the traditional equations may somewhat overestimate the attractive effect of the ground.
Numerical Modeling of the Surface Fatigue Crack Propagation Including the Closure Effect
Guchinsky, Ruslan; Petinov, Sergei
2016-01-01
Presently modeling of surface fatigue crack growth for residual life assessment of structural elements is almost entirely based on application of the Linear Elastic Fracture Mechanics (LEFM). Generally, it is assumed that the crack front does not essentially change its shape, although it is not always confirmed by experiment. Furthermore, LEFM approach cannot be applied when the stress singularity vanishes due to material plasticity, one of the leading factors associated with the material degradation and fracture. Also, evaluation of stress intensity factors meets difficulties associated with changes in the stress state along the crack front circumference. An approach proposed for simulation the evolution of surface cracks based on application of the Strain-life criterion for fatigue failure and of the finite element modeling of damage accumulation. It takes into account the crack closure effect, the nonlinear behavior of damage accumulation and material compliance increasing due to the damage advance. The damage accumulation technique was applied to model the semi-elliptical crack growth from the initial defect in the steel compact specimen. The results of simulation are in good agreement with the published experimental data.
Developing parameters for multi-mode ambient air models including the nanometer mode
Tronville, Paolo; Rivers, Richard
2017-06-01
The particle count, surface and mass in an occupied space can be modeled when the HVAC system airflows are known, along with the particle-size distribution for outdoor air, internal generation rates as a function of particle size, and the efficiency as a function of particle size for filters present. Outdoor air particle-size distribution is rarely available, but measures of particle mass concentration, PM2.5 and PM10, are often available for building locations. Outdoor air aerosol size distributions are well modeled by sums of two or three log-normal distributions, with essentially all mass in two larger modes. Studies have also shown that some mode parameters are, in general, related by simple functions. This paper shows how these relationships can be combined with known characteristics of PM2.5 and PM10 samplers to create reasonable inclusive models of outdoor air aerosol-size distributions. This information plus knowledge of indoor particle generation allows calculation of aerosol mass in occupied spaces. Estimation of parameters of aerosol modes with sizes below100 nm and measurement of filter efficiencies in that range are described.
Thermal asymmetry model of single slope single basin solar still with sponge liner
Directory of Open Access Journals (Sweden)
Shanmugan Sengottain
2014-01-01
Full Text Available An attempt has been made to propose a thermal asymmetry model for single slope basin type solar still with sponge liner of different thickness (3cm, 5cm, and 10cm in the basin. Two different color sponge liners have been used i.e., yellow and black. In the proposed design, a suitable dripping arrangement has been designed and used to pour water drop by drop over the sponge liner instead of sponge liner in stagnant saline water in the basin. The special arrangement overcomes the dryness of the sponge during peak sunny hours. The performance of the system with black color sponge of 3cm thickness shows better result with an output of 5.3 kg/m2 day and the proposed model have used to find the thermal asymmetries during the working hours of the still.
Lack, Justin B; Cardeno, Charis M; Crepeau, Marc W; Taylor, William; Corbett-Detig, Russell B; Stevens, Kristian A; Langley, Charles H; Pool, John E
2015-04-01
Hundreds of wild-derived Drosophila melanogaster genomes have been published, but rigorous comparisons across data sets are precluded by differences in alignment methodology. The most common approach to reference-based genome assembly is a single round of alignment followed by quality filtering and variant detection. We evaluated variations and extensions of this approach and settled on an assembly strategy that utilizes two alignment programs and incorporates both substitutions and short indels to construct an updated reference for a second round of mapping prior to final variant detection. Utilizing this approach, we reassembled published D. melanogaster population genomic data sets and added unpublished genomes from several sub-Saharan populations. Most notably, we present aligned data from phase 3 of the Drosophila Population Genomics Project (DPGP3), which provides 197 genomes from a single ancestral range population of D. melanogaster (from Zambia). The large sample size, high genetic diversity, and potentially simpler demographic history of the DPGP3 sample will make this a highly valuable resource for fundamental population genetic research. The complete set of assemblies described here, termed the Drosophila Genome Nexus, presently comprises 623 consistently aligned genomes and is publicly available in multiple formats with supporting documentation and bioinformatic tools. This resource will greatly facilitate population genomic analysis in this model species by reducing the methodological differences between data sets. Copyright © 2015 by the Genetics Society of America.
Galactic habitable zone around M and FGK stars with chemical evolution models that include dust
Spitoni, E.; Gioannini, L.; Matteucci, F.
2017-09-01
Context. The Galactic habitable zone is defined as the region with a metallicity that is high enough to form planetary systems in which Earth-like planets could be born and might be capable of sustaining life. Life in this zone needs to survive the destructive effects of nearby supernova explosion events. Aims: Galactic chemical evolution models can be useful tools for studying the galactic habitable zones in different systems. Our aim here is to find the Galactic habitable zone using chemical evolution models for the Milky Way disk, adopting the most recent prescriptions for the evolution of dust and for the probability of finding planetary systems around M and FGK stars. Moreover, for the first time, we express these probabilities in terms of the dust-to-gas ratio of the interstellar medium in the solar neighborhood as computed by detailed chemical evolution models. Methods: At a fixed Galactic time and Galactocentric distance, we determined the number of M and FGK stars that host earths (but no gas giant planets) that survived supernova explosions, using the formalism of our Paper I. Results: The probabilities of finding terrestrial planets but not gas giant planets around M stars deviate substantially from the probabilities around FGK stars for supersolar values of [Fe/H]. For both FGK and M stars, the maximum number of stars hosting habitable planets is at 8 kpc from the Galactic Center when destructive effects by supernova explosions are taken into account. Currently, M stars with habitable planets are ≃10 times more frequent than FGK stars. Moreover, we provide a sixth-order polynomial fit (and a linear fit, but that is more approximated) for the relation found with chemical evolution models in the solar neighborhood between the [Fe/H] abundances and the dust-to-gas ratio. Conclusions: The most likely Galactic zone in which to find terrestrial habitable planets around M and FGK stars is the annular 2 kpc wide region that is centered at 8 kpc from the
Comparison of lead isotopes with source apportionment models, including SOM, for air particulates.
Gulson, Brian; Korsch, Michael; Dickson, Bruce; Cohen, David; Mizon, Karen; Davis, J Michael
2007-08-01
We have measured high precision lead isotopes in PM(2.5) particulates from a highly-trafficked site (Mascot) and rural site (Richmond) in the Sydney Basin, New South Wales, Australia to compare with isotopic data from total suspended particulates (TSP) from other sites in the Sydney Basin and evaluate relationships with source fingerprints obtained from multi-element PM(2.5) data. The isotopic data for the period 1998 to 2004 show seasonal peaks and troughs that are more pronounced in the rural site for the PM(2.5).samples but are consistent with the TSP. The Self Organising Map (SOM) method has been applied to the multi-element PM(2.5) data to evaluate its use in obtaining fingerprints for comparison with standard statistical procedures (ANSTO model). As seasonal effects are also significant for the multi-element data, the SOM modelling is reported as site and season dependent. At the Mascot site, the ANSTO model exhibits decreasing (206)Pb/(204)Pb ratios with increasing contributions of fingerprints for "secondary smoke" (industry), "soil", "smoke" and "seaspray". Similar patterns were shown by SOM winter fingerprints for both sites. At the rural site, there are large isotopic variations but for the majority of samples these are not associated with increased contributions from the main sources with the ANSTO model. For two winter sampling times, there are increased contributions from "secondary industry", "smoke", "soil" and seaspray with one time having a source or sources of Pb similar to that of Mascot. The only positive relationship between increasing (206)Pb/(204)Pb ratio and source contributions is found at the rural site using the SOM summer fingerprints, both of which show a significant contribution from sulphur. Several of the fingerprints using either model have significant contributions from black carbon (BC) and/or sulphur (S) that probably derive from diesel fuels and industrial sources. Increased contributions from sources with the SOM summer
Kim, Yoon-Jee; Cho, Sung-Eun; Um, Ji-Yong; Chae, Min-Kyun; Bang, Jihoon; Song, Jongkeun; Jeon, Taeho; Kim, Byungsub; Sim, Jae-Yoon; Park, Hong-June
2017-02-01
A 64-channel RX digital beamformer was implemented in a single chip for 3-D ultrasound medical imaging using 2-D phased-array transducers. The RX beamformer chip includes 64 analog front-end branches including 64 non-uniform sampling ADCs, a FIFO/Adder, and an on-chip look-up table (LUT). The LUT stores the information on the rising edge timing of the non-uniform ADC sampling clocks. To include the LUT inside the beamformer chip, the LUT size was reduced by around 240 times by approximating an ADC-sample-time profile w.r.t. focal points (FP) along a scanline (SL) for a channel into a piece-wise linear form. The maximum error between the approximated and accurate sample times of ADC is eight times the sample time resolution (Ts) that is 1/32 of the ultrasound signal period in this work. The non-uniform sampling reduces the FIFO size required for digital beamforming by around 20 times. By applying a 9-dot image from Field-II program and 2-D ultrasound phantom images to the fabricated RX beamformer chip, the original images were successfully reconstructed from the measured output. The chip in a 0.13-um CMOS occupies 30.25 [Formula: see text] and consumes 605 mW.
Walzer, Amy S; Czopp, Alexander M
2011-01-01
The stereotype content model (SCM) posits that warmth and competence are the key components underlying judgments about social groups. Because competence can encompass different components (e.g., intelligence, talent) different group members may be perceived to be competent for different reasons. Therefore, we believe it may be important to specify the type of competence being assessed when examining perceptions of groups that are positively stereotyped (i.e., Black athletes and musical Blacks). Consistent with the SCM, these subgroups were perceived as high in competence-talent but not in competence-intelligence and low in warmth. Both the intelligence and talent frame of competence fit in the SCM's social structural hypothesis.
Microregion model of a contact line including evaporation, kinetics and slip
Anderson, Daniel; Janecek, Vladislav
2016-11-01
We consider the evaporation of a liquid on a uniformly heated solid substrate. In the framework of lubrication theory we consider hydrodynamics, heat conduction, phase change, evaporation kinetics, and slip. Our model focuses only on the contact line 'inner' region which allows us to quantify the impact of evaporation on the apparent contact angle and microregion heat transfer. The linearized problem with respect to the substrate overheating is solved analytically. The analytical solutions are compared with full numerical solutions and to predictions of Hocking.
DEFF Research Database (Denmark)
Andersen, Morten; Vinther, Frank; Ottesen, Johnny T.
2013-01-01
non-negative and bounded, which can be interpreted as a mathematical formulation of homeostasis. No oscillating solutions are present when using physiologically reasonable parameter values. This indicates that the ultradian rhythm originate from different mechanisms.Using physiologically reasonable......This paper presents a mathematical model of the HPA axis. The HPA axis consists of the hypothalamus, the pituitary and the adrenal glands in which the three hormones CRH, ACTH and cortisol interact through receptor dynamics. Furthermore, it has been suggested that receptors in the hippocampus have...
Double pendulum model for a tennis stroke including a collision process
Youn, Sun-Hyun
2015-10-01
By means of adding a collision process between the ball and racket in the double pendulum model, we analyzed the tennis stroke. The ball and the racket system may be accelerated during the collision time; thus, the speed of the rebound ball does not simply depend on the angular velocity of the racket. A higher angular velocity sometimes gives a lower rebound ball speed. We numerically showed that the proper time-lagged racket rotation increased the speed of the rebound ball by 20%. We also showed that the elbow should move in the proper direction in order to add the angular velocity of the racket.
Modeling the elastic behavior of ductile cast iron including anisotropy in the graphite nodules
DEFF Research Database (Denmark)
Andriollo, Tito; Thorborg, Jesper; Hattel, Jesper Henri
2016-01-01
This paper presents a micro-mechanical approach to model the intrinsic elastic anisotropy of the graphite particles in ductile iron. Contrary to most of the published works in the field, the constitutive behavior is directly derived on the basis of the nodule characteristic internal structure......, composed of graphite platelets arranged into conical sectors. In this way, the large uncertainty traditionally associated with local mechanical measurements of micro-hardness is eliminated. The proposed anisotropic description is validated by simulating the macroscopic ductile iron elastic response...
Including Antenna Models in Microwave Imaging for Breast-Cancer Screening
DEFF Research Database (Denmark)
Rubæk, Tonny; Meincke, Peter
2006-01-01
Microwave imaging is emerging as a tool for screening for breast cancer, but the lack of methods for including the characteristics of the antennas of the imaging systems in the imaging algorithms limits their performance. In this paper, a method for incorporating the full antenna characteristics......, in terms of the transmission-matrix representation, in a frequency-domain imaging algorithm is presented. The algorithm is tested on a simulation of the Physical-Anomaly Tomography (PAT) scanner imaging system developed at the Technical University of Denmark and is shown to have superior performance when...
Telgmann, Lena; Nguyen, Michael Thanh Khoa; Shen, Li; Yargeau, Viviane; Hintelmann, Holger; Metcalfe, Chris D
2016-07-01
Silver nanoparticles (AgNPs) are used in a large number of consumer products due to their antimicrobial and antifungal properties, and these materials may be discharged into municipal wastewater. Wastewater treatment, including advanced oxidation processes (AOPs), may modify the forms of silver in wastewater before they are discharged into surface waters. In addition, little is known about the changes in AgNPs that occur in natural waters under different environmental conditions. In this project, we utilized single particle ICP-MS (spICP-MS) and dynamic light scattering (DLS) analytical techniques to evaluate changes in the number and size of AgNPs in laboratory experiments with milliQ water under different environmental conditions, as well as during ozonation. Changes in the number and size of AgNPs determined by spICP-MS were evidence of altered stability of the nanoparticles. Increased rates of dissolution occurred under extremes of pH. Lower temperature decreased the rate of dissolution of AgNP relative to the dissolution in treatments at room temperature. The addition of chloride resulted in the loss of AgNPs from suspension due to agglomeration and precipitation. Ozonation led to a rapid decline in the number and size of AgNPs, as indicated by both spICP-MS and DLS analysis. An increase in the concentration of dissolved silver in the ozone treatments was evidence that changes in particle size were a result of oxidative dissolution of AgNPs to silver ion. Graphical abstract Single particle ICP-MS is used to evaluate dissolution of silver nanoparticles under different environmental conditions, including water treatment by ozonation.
Energy Technology Data Exchange (ETDEWEB)
Eichwald, C.; Kaiser, F. [Technical Univ. of Darmstadt (Germany)
1995-06-01
Experiments on the effects of extremely-low-frequency (ELF) electric and magnetic fields on cells of the immune system, T-lymphocytes in particular, suggest that the external field interacts with the cell at the level of intracellular signal transduction pathways. These are directly connected with changes in the calcium-signaling processes of the cell. Based on these findings, a theoretical model for receptor-controlled cytosolic calcium oscillations and for external influences on the signal transduction pathway is presented. The authors discuss the possibility that the external field acts on the kinetics of the signal transduction between the activated receptors at the cell membrane and the G-proteins. It is shown that, depending on the specific combination of cell internal biochemical and external physical parameters, entirely different responses of the cell can occur. The authors compare the effects of a coherent (periodic) modulation and of incoherent perturbations (noise). The model and the calculations are based on the theory of self-sustained, nonlinear oscillators. It is argued that these systems form an ideal basis for information-encoding processes in biological systems.
An Improved Heat Budget Estimation Including Bottom Effects for General Ocean Circulation Models
Carder, Kendall; Warrior, Hari; Otis, Daniel; Chen, R. F.
2001-01-01
This paper studies the effects of the underwater light field on heat-budget calculations of general ocean circulation models for shallow waters. The presence of a bottom significantly alters the estimated heat budget in shallow waters, which affects the corresponding thermal stratification and hence modifies the circulation. Based on the data collected during the COBOP field experiment near the Bahamas, we have used a one-dimensional turbulence closure model to show the influence of the bottom reflection and absorption on the sea surface temperature field. The water depth has an almost one-to-one correlation with the temperature rise. Effects of varying the bottom albedo by replacing the sea grass bed with a coral sand bottom, also has an appreciable effect on the heat budget of the shallow regions. We believe that the differences in the heat budget for the shallow areas will have an influence on the local circulation processes and especially on the evaporative and long-wave heat losses for these areas. The ultimate effects on humidity and cloudiness of the region are expected to be significant as well.
Grids of stellar models including second harmonic and colours: Solar composition
Yildiz, Mutlu
2015-01-01
Grids of stellar evolution are required in many fields of astronomy/astrophysics, such as planet hosting stars, binaries, clusters, chemically peculiar stars, etc. In this study, a grid of stellar evolution models with updated ingredients and {recently determined solar abundaces} is presented. The solar values for the initial abundances of hydrogen, heavy elements and mixing-length parameter are 0.0172, 0.7024 and 1.98, respectively. The mass step is small enough (0.01 M$_\\odot$) that interpolation for a given star mass is not required. The range of stellar mass is 0.74 to 10.00 M$_\\odot$. We present results in different forms of tables for easy and general application. The second stellar harmonic, required for analysis of apsidal motion of eclipsing binaries, is also listed. We also construct rotating models to determine effect of rotation on stellar structure and derive fitting formula for luminosity, radius and the second stellar harmonic as a function of rotational parameter. We also compute and list colo...
Analysis of the R-symmetric supersymmetric models including quantum corrections
Kotlarski, Wojciech
2016-01-01
We study the Minimal R-symmetric Supersymmetric Standard Model (MRSSM) at the quantum level. The thesis consists of two parts. First one treats about the electroweak sector of the model. Among others, it identifies the parameter region allowed by the electroweak precision observables. Since the MRSSM contains an $SU(2)_L$-triplet with a non-zero vacuum expectation value the emphasis is put on the calculation of the $W$ boson mass. To that end, a full one-loop calculation of $m_W$ augmented with the leading two-loop SM result is presented. The region is then checked against the measurement of the Higgs boson mass. For this, the full one-loop and leading two-loop corrections to the Higgs boson mass in the MRSSM are calculated. Devised benchmark points, consistent with both of these observables, are shown to fulfill also a number of additional experimental constraints like properties of the Higgs boson(s), $b$-physics observables and vacuum stability. Correlating all of these observables allows to put bounds on ...
Description and Application of A Model of Seepage under A Weir Including Mechanical Clogging
Directory of Open Access Journals (Sweden)
Sroka Zbigniew
2014-07-01
Full Text Available The paper discusses seepage flow under a damming structure (a weir in view of mechanical clogging in a thin layer at the upstream site. It was assumed that in this layer flow may be treated as one-dimensional (perpendicular to the layer, while elsewhere flow was modelled as two-dimensional. The solution in both zones was obtained in the discrete form using the finite element method and the Euler method. The effect of the clogging layer on seepage flow was modelled using the third kind boundary condition. Seepage parameters in the clogging layer were estimated based on laboratory tests conducted by Skolasińska [2006]. Typical problem was taken to provide simulation and indicate how clogging affects the seepage rate and other parameters of the flow. Results showed that clogging at the upstream site has a significant effect on the distribution of seepage velocity and hydraulic gradients. The flow underneath the structure decreases with time, but these changes are relatively slow.
Fritz, Thomas; Wieners, Christian; Seemann, Gunnar; Steen, Henning; Dössel, Olaf
2014-06-01
During the contraction of the ventricles, the ventricles interact with the atria as well as with the pericardium and the surrounding tissue in which the heart is embedded. The atria are stretched, and the atrioventricular plane moves toward the apex. The atrioventricular plane displacement (AVPD) is considered to be a major contributor to the ventricular function, and a reduced AVPD is strongly related to heart failure. At the same time, the epicardium slides almost frictionlessly on the pericardium with permanent contact. Although the interaction between the ventricles, the atria and the pericardium plays an important role for the deformation of the heart, this aspect is usually not considered in computational models. In this work, we present an electromechanical model of the heart, which takes into account the interaction between ventricles, pericardium and atria and allows to reproduce the AVPD. To solve the contact problem of epicardium and pericardium, a contact handling algorithm based on penalty formulation was developed, which ensures frictionless and permanent contact. Two simulations of the ventricular contraction were conducted, one with contact handling of pericardium and heart and one without. In the simulation with contact handling, the atria were stretched during the contraction of the ventricles, while, due to the permanent contact with the pericardium, their volume increased. In contrast to that, in the simulations without pericardium, the atria were also stretched, but the change in the atrial volume was much smaller. Furthermore, the pericardium reduced the radial contraction of the ventricles and at the same time increased the AVPD.
Sacchi, Mattia; Balleza, Daniel; Vena, Giulia; Puia, Giulia; Facci, Paolo; Alessandrini, Andrea
2015-05-01
Amphiphilic molecules which have a biological effect on specific membrane proteins, could also affect lipid bilayer properties possibly resulting in a modulation of the overall membrane behavior. In light of this consideration, it is important to study the possible effects of amphiphilic molecule of pharmacological interest on model systems which recapitulate some of the main properties of the biological plasma membranes. In this work we studied the effect of a neurosteroid, Allopregnanolone (3α,5α-tetrahydroprogesterone or Allo), on a model bilayer composed by the ternary lipid mixture DOPC/bSM/chol. We chose ternary mixtures which present, at room temperature, a phase coexistence of liquid ordered (Lo) and liquid disordered (Ld) domains and which reside near to a critical point. We found that Allo, which is able to strongly partition in the lipid bilayer, induces a marked increase in the bilayer area and modifies the relative proportion of the two phases favoring the Ld phase. We also found that the neurosteroid shifts the miscibility temperature to higher values in a way similarly to what happens when the cholesterol concentration is decreased. Interestingly, an isoform of Allo, isoAllopregnanolone (3β,5α-tetrahydroprogesterone or isoAllo), known to inhibit the effects of Allo on GABAA receptors, has an opposite effect on the bilayer properties.
Single-molecule elasticity of single-stranded DNA, a model flexible polyelectrolyte
McIntosh, Dustin B.
Understanding the structure of unfolded, flexible polyelectrolytes is important for our comprehension of basic processes in molecular biology (e.g., RNA and protein folding) and our ability to exploit the polymers in technology (e.g., in self-assembled nanostructures). Here, we investigate the structure of single single-stranded DNA molecules and their interactions with ions using magnetic tweezers. Our data reveal that single-stranded DNA is not well-described by ideal polymer models such as the Worm-Like Chain. At low force, we report the first experimental observation of a nonlinear elastic regime revealing the relevance of long-range excluded volume effects. At high force, the extension scales as a logarithm in monovalent salt. Molecular dynamics simulations indicate that this logarithmic regime is the result of ion-stabilized wrinkles at short-length scales along the polymer backbone. Addition of divalent salt to the buffer results in enhanced elasticity indicating increased wrinkling or polymer ''wrapping" around the divalent ions. Using a thermodynamic identity, we are able to count ions as they are released into the bulk upon polymer elongation. We find that ssDNA releases significantly more ions than dsDNA. We posit that the recently termed ''Snake-Like Chain" model (Ullner, J. Phys. Chem B (2003)) for flexible polyelectrolytes may explain these observations. As a first step towards characterizing biologically relevant nucleic acid structures, we measure the effects of base-stacking on ssDNA elasticity. We find that base-stacking in poly(dA) significantly enhances the rigidity of the polymer as evidenced by the low-force elasticity. The unstacking transition of poly(dA) at high force reveals that the intrinsic electrostatic tension on the molecule varies significantly more weakly on salt concentration than predictions from mean-field models. Further, we provide a model-independent estimate of the free energy difference between stacked and unstacked nucleic
Single-cell model of prokaryotic cell cycle.
Abner, Kristo; Aaviksaar, Tõnis; Adamberg, Kaarel; Vilu, Raivo
2014-01-21
One of the recognized prokaryotic cell cycle theories is Cooper-Helmstetter (CH) theory which relates start of DNA replication to particular (initiation) cell mass, cell growth and division. Different aspects of this theory have been extensively studied in the past. In the present study CH theory was applied at single cell level. Universal equations were derived for different cell parameters (cell mass and volume, surface area, DNA amount and content) depending on constructivist cell cycle parameters (unit mass, replication and division times, cell age, cell cycle duration) based on selected growth laws of cell mass (linear, exponential). The equations derived can be integrated into single-cell models for the analysis and design of bacterial cells. © 2013 Published by Elsevier Ltd.
Multiscale modeling and surgical planning for single ventricle heart patients
Marsden, Alison
2011-11-01
Single ventricle heart patients are among the most challenging for pediatric cardiologists to treat, and typically undergo a palliative course of three open-heart surgeries starting immediately after birth. We will present recent tools for modeling blood flow in single ventricle heart patients using a multiscale approach that couples a 3D Navier-Stokes domain to a 0D closed loop lumped parameter network comprised of circuit elements. This coupling allows us to capture the effect of changes in local geometry, such as shunt sizes, on global circulatory dynamics, such as cardiac output. A semi-implicit numerical method is formulated to solve the coupled system in which flow and pressure information is passed between the two domains at the inlets and outlets of the model. A finite element method with outflow stabilization is applied in the 3D Navier-Stokes domain, and the LPN system of ordinary differential equations is solved numerically using a Runge-Kutta method. These tools are coupled via automated scripts to a derivative-free optimization method. Optimization is used to systematically explore surgical designs using clinically relevant cost functions for two stages of single ventricle repair. First, we will present results from optimization of the first stage Blalock Taussig Shunt. Second, we will present results from optimization of a new Y-graft design for the third stage of single ventricle repair called the Fontan surgery. The Y-graft is shown, in simulations, to successfully improve hepatic flow distribution, a known clinical problem. Preliminary clinical experience with the Y-graft will be discussed.
Dai, Wangde; Kloner, Robert A
2010-01-01
As a novel potential therapeutic strategy for cardiac disease, cell transplantation therapy has been extensively investigated in experimental studies and clinical trials. Although encouraging results have been demonstrated, a number of critical questions still remain to be answered. For example, what kind of stem cell and how many cells should be used; what is the best time for cell transplantation after acute myocardial infarction; which delivery approach is better, intravenous injection or direct intramyocardial injection? Transplantation of cells derived from human tissues into experimental animals may elicit an immune rejection. Immunodeficient nude rats provide a useful myocardial infarction model for cell transplantation therapy studies. We introduce our detailed methods of direct intramyocardial injection of immature heart cells and stem cells into the myocardial infarction region of rats and nude rats. Careful maintenance under aseptic conditions and proper surgical technique are essential to improve the survival of immunodeficient rats after surgery.
Including ethical considerations in models for ﬁrst-trimester screening for pre-eclampsia
DEFF Research Database (Denmark)
Jørgensen, Jennifer Maureen; Hedley, Paula L.; Gjerris, Mickey;
2014-01-01
Recent efforts to develop reliable and efficient early pregnancy screening programmes for pre-eclampsia have focused on com-bining clinical, biochemical and biophysical markers. The same model has been used for first-trimester screening for fetal aneuploidies i.e. prenatal diagnosis (PD), which...... is routinely offered to all pregnant women in many developed countries. Some studies suggest combining PD and pre-eclampsia screening, so women can be offered testing for a number of conditions at the same clinical visit. A combination of these tests may be practical in terms of saving time and resources......; however, the combination raises ethical issues. First-trimester PD and pre-eclampsia screening entail qualitative differences which alter the requirements for disclosure, non-directedness and consent with regard to the informed consent process. This article explores the differences related to the ethical...
The economic production lot size model extended to include more than one production rate
DEFF Research Database (Denmark)
Larsen, Christian
2001-01-01
btween the demand rate and the production rate which minimizes unit production costs, and should be used in an increasing order. Then, given the production rates, we derive closed-form expressions for all optimal runtimes as well as the minimum average cost. This analysis reveals that it is the size......We study an extension of the economic production lot size model, where more than one production rate can be used during a cycle. Moreover, the production rates, as well as their corresponding runtimes are decision variables. First, we show that all production rates should be choosen in the interval...... of the setup cost that determines the need for being able to use several production rates. Finally, we show how to derive a near-optimal solution of the general problem....
The economic production lot size model extended to include more than one production rate
DEFF Research Database (Denmark)
Larsen, Christian
2005-01-01
production rates should be chosen in the interval between the demand rate and the production rate which minimizes unit production costs, and should be used in an increasing order. Then, given the production rates, we derive closed-form expressions for all optimal runtimes as well as the minimum average cost......We study an extension of the economic production lot size model, where more than one production rate can be used during a cycle. Moreover, the production rates, as well as their corresponding runtimes are decision variables. We decompose the problem into two subproblems. First, we show that all....... This analysis reveals that it is the size of the setup cost that determines the need for being able to use several production rates. We also show how to derive a near-optimal solution of the general problem....
Modelling of safety barriers including human and organisational factors to improve process safety
DEFF Research Database (Denmark)
Markert, Frank; Duijm, Nijs Jan; Thommesen, Jacob
2013-01-01
explosion, and the Mont Blanc Tunnel Fire, such an approach may have helped to maintain the integrity of the designed provisions against major deviations resulting in these disasters. In order to make this paradigm operational, safety management and in particular risk assessment tools need to be refined....... A valuable approach is the inclusion of human and organisational factors into the simulation of the reliability of the technical system using event trees and fault trees and the concept of safety barriers. This has been demonstrated e.g. in the former European research project ARAMIS (Accidental Risk...... Assessment Methodology for IndustrieS, see Salvi et al 2006). ARAMIS employs the bow-tie approach to modelling hazardous scenarios, and it suggests the outcome of auditing safety management to be connected to a semi-quantitative assessment of the quality of safety barriers. ARAMIS discriminates a number...
Non-insect crustacean models in developmental genetics including an encomium to Parhyale hawaiensis.
Stamataki, Evangelia; Pavlopoulos, Anastasios
2016-08-01
The impressive diversity of body plans, lifestyles and segmental specializations exhibited by crustaceans (barnacles, copepods, shrimps, crabs, lobsters and their kin) provides great material to address longstanding questions in evolutionary developmental biology. Recent advances in forward and reverse genetics and in imaging approaches applied in the amphipod Parhyale hawaiensis and other emerging crustacean model species have made it possible to probe the molecular and cellular basis of crustacean diversity. A number of biological and technical qualities like the slow tempo and holoblastic cleavage mode, the stereotypy of many cellular processes, the functional and morphological diversity of limbs along the body axis, and the availability of various experimental manipulations, have made Parhyale a powerful system to study normal development and regeneration. Copyright © 2016 Elsevier Ltd. All rights reserved.
Directory of Open Access Journals (Sweden)
Isabelle Bloch
2007-01-01
Full Text Available This paper describes a system for optical music recognition (OMR in case of monophonic typeset scores. After clarifying the difficulties specific to this domain, we propose appropriate solutions at both image analysis level and high-level interpretation. Thus, a recognition and segmentation method is designed, that allows dealing with common printing defects and numerous symbol interconnections. Then, musical rules are modeled and integrated, in order to make a consistent decision. This high-level interpretation step relies on the fuzzy sets and possibility framework, since it allows dealing with symbol variability, flexibility, and imprecision of music rules, and merging all these heterogeneous pieces of information. Other innovative features are the indication of potential errors and the possibility of applying learning procedures, in order to gain in robustness. Experiments conducted on a large data base show that the proposed method constitutes an interesting contribution to OMR.
Rossant, Florence; Bloch, Isabelle
2006-12-01
This paper describes a system for optical music recognition (OMR) in case of monophonic typeset scores. After clarifying the difficulties specific to this domain, we propose appropriate solutions at both image analysis level and high-level interpretation. Thus, a recognition and segmentation method is designed, that allows dealing with common printing defects and numerous symbol interconnections. Then, musical rules are modeled and integrated, in order to make a consistent decision. This high-level interpretation step relies on the fuzzy sets and possibility framework, since it allows dealing with symbol variability, flexibility, and imprecision of music rules, and merging all these heterogeneous pieces of information. Other innovative features are the indication of potential errors and the possibility of applying learning procedures, in order to gain in robustness. Experiments conducted on a large data base show that the proposed method constitutes an interesting contribution to OMR.
Parsing recursive sentences with a connectionist model including a neural stack and synaptic gating.
Fedor, Anna; Ittzés, Péter; Szathmáry, Eörs
2011-02-21
It is supposed that humans are genetically predisposed to be able to recognize sequences of context-free grammars with centre-embedded recursion while other primates are restricted to the recognition of finite state grammars with tail-recursion. Our aim was to construct a minimalist neural network that is able to parse artificial sentences of both grammars in an efficient way without using the biologically unrealistic backpropagation algorithm. The core of this network is a neural stack-like memory where the push and pop operations are regulated by synaptic gating on the connections between the layers of the stack. The network correctly categorizes novel sentences of both grammars after training. We suggest that the introduction of the neural stack memory will turn out to be substantial for any biological 'hierarchical processor' and the minimalist design of the model suggests a quest for similar, realistic neural architectures.
Modeling the dynamics of single-bubble sonoluminescence
Vignoli, Lucas L; Thomé, Roberto C A; Nogueira, A L M A; Paschoal, Ricardo C; Rodrigues, Hilario
2014-01-01
Sonoluminescence (SL) is the phenomenon in which acoustic energy is (partially) transformed into light. It may occur by means of many or just one bubble of gas inside a liquid medium, giving rise to the terms multi-bubble- and single-bubble sonoluminescence (MBSL and SBSL). In the last years some models have been proposed to explain this phenomenon, but there is still no complete theory for the light emission mechanism (especially in the case of SBSL). In this work, we will not address this more complicated particular issue, but only present a simple model describing the dynamical behaviour of the sonoluminescent bubble, in the SBSL case. Using simple numerical techniques within the software Matlab, we discuss solutions considering various possibilities for some of the parameters involved: liquid compressibility, superficial tension, viscosity, and type of gas. The model may be used as an introductory study of sonoluminescence in physics courses at undergraduate or graduate levels, as well as a quite clarifyi...
Model of single-electron performance of micropixel avalanche photodiodes
Sadygov, Z; Akhmedov, G; Akhmedov, F; Khorev, S; Mukhtarov, R; Sadigov, A; Sidelev, A; Titov, A; Zerrouk, F; Zhezher, V
2014-01-01
An approximate iterative model of avalanche process in a pixel of micropixel avalanche photodiode initiated by a single photoelectron is presented. The model describes development of the avalanche process in time, taking into account change of electric field within the depleted region caused by internal discharge and external recharge currents. Conclusions obtained as a result of modelling are compared with experimental data. Simulations show that typical durations of the front and rear edges of the discharge current have the same magnitude of less than 50 ps. The front of the external recharge current has the same duration, however duration of the rear edge depends on value of the quenching micro-resistor. It was found that effective capacitance of the pixel calculated as the slope of linear dependence of the pulse charge on bias voltage exceeds its real capacitance by a factor of two.
Areal rainfall estimation using moving cars - computer experiments including hydrological modeling
Rabiei, Ehsan; Haberlandt, Uwe; Sester, Monika; Fitzner, Daniel; Wallner, Markus
2016-09-01
The need for high temporal and spatial resolution precipitation data for hydrological analyses has been discussed in several studies. Although rain gauges provide valuable information, a very dense rain gauge network is costly. As a result, several new ideas have emerged to help estimating areal rainfall with higher temporal and spatial resolution. Rabiei et al. (2013) observed that moving cars, called RainCars (RCs), can potentially be a new source of data for measuring rain rate. The optical sensors used in that study are designed for operating the windscreen wipers and showed promising results for rainfall measurement purposes. Their measurement accuracy has been quantified in laboratory experiments. Considering explicitly those errors, the main objective of this study is to investigate the benefit of using RCs for estimating areal rainfall. For that, computer experiments are carried out, where radar rainfall is considered as the reference and the other sources of data, i.e., RCs and rain gauges, are extracted from radar data. Comparing the quality of areal rainfall estimation by RCs with rain gauges and reference data helps to investigate the benefit of the RCs. The value of this additional source of data is not only assessed for areal rainfall estimation performance but also for use in hydrological modeling. Considering measurement errors derived from laboratory experiments, the result shows that the RCs provide useful additional information for areal rainfall estimation as well as for hydrological modeling. Moreover, by testing larger uncertainties for RCs, they observed to be useful up to a certain level for areal rainfall estimation and discharge simulation.
ECO: a generic eutrophication model including comprehensive sediment-water interaction.
Directory of Open Access Journals (Sweden)
Johannes G C Smits
Full Text Available The content and calibration of the comprehensive generic 3D eutrophication model ECO for water and sediment quality is presented. Based on a computational grid for water and sediment, ECO is used as a tool for water quality management to simulate concentrations and mass fluxes of nutrients (N, P, Si, phytoplankton species, detrital organic matter, electron acceptors and related substances. ECO combines integral simulation of water and sediment quality with sediment diagenesis and closed mass balances. Its advanced process formulations for substances in the water column and the bed sediment were developed to allow for a much more dynamic calculation of the sediment-water exchange fluxes of nutrients as resulting from steep concentration gradients across the sediment-water interface than is possible with other eutrophication models. ECO is to more accurately calculate the accumulation of organic matter and nutrients in the sediment, and to allow for more accurate prediction of phytoplankton biomass and water quality in response to mitigative measures such as nutrient load reduction. ECO was calibrated for shallow Lake Veluwe (The Netherlands. Due to restoration measures this lake underwent a transition from hypertrophic conditions to moderately eutrophic conditions, leading to the extensive colonization by submerged macrophytes. ECO reproduces observed water quality well for the transition period of ten years. The values of its process coefficients are in line with ranges derived from literature. ECO's calculation results underline the importance of redox processes and phosphate speciation for the nutrient return fluxes. Among other things, the results suggest that authigenic formation of a stable apatite-like mineral in the sediment can contribute significantly to oligotrophication of a lake after a phosphorus load reduction.
Directory of Open Access Journals (Sweden)
P. Kumar
2009-04-01
Full Text Available Dust and black carbon aerosol have long been known to exert potentially important and diverse impacts on cloud droplet formation. Most studies to date focus on the soluble fraction of these particles, and overlook interactions of the insoluble fraction with water vapor (even if known to be hydrophilic. To address this gap, we developed a new parameterization that considers cloud droplet formation within an ascending air parcel containing insoluble (but wettable particles externally mixed with aerosol containing an appreciable soluble fraction. Activation of particles with a soluble fraction is described through well-established Köhler theory, while the activation of hydrophilic insoluble particles is treated by "adsorption-activation" theory. In the latter, water vapor is adsorbed onto insoluble particles, the activity of which is described by a multilayer Frenkel-Halsey-Hill (FHH adsorption isotherm modified to account for particle curvature. We further develop FHH activation theory to i find combinations of the adsorption parameters A_{FHH}, B_{FHH} which yield atmospherically-relevant behavior, and, ii express activation properties (critical supersaturation that follow a simple power law with respect to dry particle diameter.
The new parameterization is tested by comparing the parameterized cloud droplet number concentration against predictions with a detailed numerical cloud model, considering a wide range of particle populations, cloud updraft conditions, water vapor condensation coefficient and FHH adsorption isotherm characteristics. The agreement between parameterization and parcel model is excellent, with an average error of 10% and R^{2}~0.98. A preliminary sensitivity study suggests that the sublinear response of droplet number to Köhler particle concentration is not as strong for FHH particles.
Kumar, P.; Sokolik, I. N.; Nenes, A.
2009-04-01
Dust and black carbon aerosol have long been known to exert potentially important and diverse impacts on cloud droplet formation. Most studies to date focus on the soluble fraction of these particles, and overlook interactions of the insoluble fraction with water vapor (even if known to be hydrophilic). To address this gap, we developed a new parameterization that considers cloud droplet formation within an ascending air parcel containing insoluble (but wettable) particles externally mixed with aerosol containing an appreciable soluble fraction. Activation of particles with a soluble fraction is described through well-established Köhler theory, while the activation of hydrophilic insoluble particles is treated by "adsorption-activation" theory. In the latter, water vapor is adsorbed onto insoluble particles, the activity of which is described by a multilayer Frenkel-Halsey-Hill (FHH) adsorption isotherm modified to account for particle curvature. We further develop FHH activation theory to i) find combinations of the adsorption parameters AFHH, BFHH which yield atmospherically-relevant behavior, and, ii) express activation properties (critical supersaturation) that follow a simple power law with respect to dry particle diameter. The new parameterization is tested by comparing the parameterized cloud droplet number concentration against predictions with a detailed numerical cloud model, considering a wide range of particle populations, cloud updraft conditions, water vapor condensation coefficient and FHH adsorption isotherm characteristics. The agreement between parameterization and parcel model is excellent, with an average error of 10% and R2~0.98. A preliminary sensitivity study suggests that the sublinear response of droplet number to Köhler particle concentration is not as strong for FHH particles.
ECO: a generic eutrophication model including comprehensive sediment-water interaction.
Smits, Johannes G C; van Beek, Jan K L
2013-01-01
The content and calibration of the comprehensive generic 3D eutrophication model ECO for water and sediment quality is presented. Based on a computational grid for water and sediment, ECO is used as a tool for water quality management to simulate concentrations and mass fluxes of nutrients (N, P, Si), phytoplankton species, detrital organic matter, electron acceptors and related substances. ECO combines integral simulation of water and sediment quality with sediment diagenesis and closed mass balances. Its advanced process formulations for substances in the water column and the bed sediment were developed to allow for a much more dynamic calculation of the sediment-water exchange fluxes of nutrients as resulting from steep concentration gradients across the sediment-water interface than is possible with other eutrophication models. ECO is to more accurately calculate the accumulation of organic matter and nutrients in the sediment, and to allow for more accurate prediction of phytoplankton biomass and water quality in response to mitigative measures such as nutrient load reduction. ECO was calibrated for shallow Lake Veluwe (The Netherlands). Due to restoration measures this lake underwent a transition from hypertrophic conditions to moderately eutrophic conditions, leading to the extensive colonization by submerged macrophytes. ECO reproduces observed water quality well for the transition period of ten years. The values of its process coefficients are in line with ranges derived from literature. ECO's calculation results underline the importance of redox processes and phosphate speciation for the nutrient return fluxes. Among other things, the results suggest that authigenic formation of a stable apatite-like mineral in the sediment can contribute significantly to oligotrophication of a lake after a phosphorus load reduction.
Folk, R; Holovatch, Yu; Moser, G
2009-03-01
We calculate the relaxational dynamical critical behavior of systems of O(n_{ parallel}) plus sign in circleO(n_{ perpendicular}) symmetry including conservation of magnetization by renormalization group theory within the minimal subtraction scheme in two-loop order. Within the stability region of the Heisenberg fixed point and the biconical fixed point, strong dynamical scaling holds, with the asymptotic dynamical critical exponent z=2varphinu-1 , where varphi is the crossover exponent and nu the exponent of the correlation length. The critical dynamics at n_{ parallel}=1 and n_{ perpendicular}=2 is governed by a small dynamical transient exponent leading to nonuniversal nonasymptotic dynamical behavior. This may be seen, e.g., in the temperature dependence of the magnetic transport coefficients.
Unified Probabilistic Models for Face Recognition from a Single Example Image per Person
Institute of Scientific and Technical Information of China (English)
Pin Liao; Li Shen
2004-01-01
This paper presents a new technique of unified probabilistic models for face recognition from only one single example image per person. The unified models, trained on an obtained training set with multiple samples per person, are used to recognize facial images from another disjoint database with a single sample per person. Variations between facial images are modeled as two unified probabilistic models: within-class variations and between-class variations. Gaussian Mixture Models are used to approximate the distributions of the two variations and exploit a classifier combination method to improve the performance. Extensive experimental results on the ORL face database and the authors' database (the ICT-JDL database) including totally 1,750facial images of 350 individuals demonstrate that the proposed technique, compared with traditional eigenface method and some well-known traditional algorithms, is a significantly more effective and robust approach for face recognition.
Unified Probabilistic Models for Face Recognition from a Single Example Image per Person
Institute of Scientific and Technical Information of China (English)
PinLiao; LiShen
2004-01-01
This paper presents a new technique of unified probabilistic models for face recognition from only one single example image per person. The unified models, trained on an obtained training set with multiple samples per person, are used to recognize facial images from another disjoint database with a single sample per person. Variations between facial images are modeled as two unified probabilistic models: within-class variations and between-class variations. Gaussian Mixture Models are used to approximate the distributions of the two variations and exploit a classifier combination method to improve the performance. Extensive experimental results on the ORL face database and the authors' database (the ICT-JDL database) including totally 1,750 facial images of 350 individuals demonstrate that the proposed technique, compared with traditional eigenface method and some well-known traditional algorithms, is a significantly more effective and robust approach for face recognition.
Energy Technology Data Exchange (ETDEWEB)
Paeth, H. [Geographical Institute, University of Wuerzburg, Am Hubland, 97074 Wuerzburg (Germany); Thamm, H.P. [Geographical Institute, University of Bonn, Bonn (Germany)
2007-08-15
Previous studies have highlighted the crucial role of land degradation in tropical African climate. This effect urgently has to be taken into account when predicting future African climate under enhanced greenhouse conditions. Here, we present time slice experiments of African climate until 2025, using a high-resolution regional climate model. A supposable scenario of future land use changes, involving vegetation loss and soil degradation, is prescribed simultaneously with increasing greenhouse-gas concentrations in order to detect, where the different forcings counterbalance or reinforce each other. This proceeding allows us to define the regions of highest vulnerability with respect to future freshwater availability and food security in tropical and subtropical Africa and may provide a decision basis for political measures. The model simulates a considerable reduction in precipitation amount until 2025 over most of tropical Africa, amounting to partly more than 500 mm (20-40% of the annual sum), particularly in the Congo Basin and the Sahel Zone. The change is strongest in boreal summer and basically reflects the pattern of maximum vegetation cover during the seasonal cycle. The related change in the surface energy fluxes induces a substantial near-surface warming by up to 7C. According to the modified temperature gradients over tropical Africa, the summer monsoon circulation intensifies and transports more humid air masses into the southern part of West Africa. This humidifying effect is overcompensated by a remarkable decrease in surface evaporation, leading to the overall drying tendency over most of Africa. Extreme daily rainfall events become stronger in autumn but less intense in spring. Summer and autumn appear to be characterized by more severe heat waves over Subsaharan West Africa. In addition, the Tropical Easterly Jet is weakening, leading to enhanced drought conditions in the Sahel Zone. All these results suggest that the local impact of land
Nuclear Reactor/Hydrogen Process Interface Including the HyPEP Model
Energy Technology Data Exchange (ETDEWEB)
Steven R. Sherman
2007-05-01
The Nuclear Reactor/Hydrogen Plant interface is the intermediate heat transport loop that will connect a very high temperature gas-cooled nuclear reactor (VHTR) to a thermochemical, high-temperature electrolysis, or hybrid hydrogen production plant. A prototype plant called the Next Generation Nuclear Plant (NGNP) is planned for construction and operation at the Idaho National Laboratory in the 2018-2021 timeframe, and will involve a VHTR, a high-temperature interface, and a hydrogen production plant. The interface is responsible for transporting high-temperature thermal energy from the nuclear reactor to the hydrogen production plant while protecting the nuclear plant from operational disturbances at the hydrogen plant. Development of the interface is occurring under the DOE Nuclear Hydrogen Initiative (NHI) and involves the study, design, and development of high-temperature heat exchangers, heat transport systems, materials, safety, and integrated system models. Research and development work on the system interface began in 2004 and is expected to continue at least until the start of construction of an engineering-scale demonstration plant.
Landau quantized dynamics and spectra for group-VI dichalcogenides, including a model quantum wire
Directory of Open Access Journals (Sweden)
Norman J. M. Horing
2017-06-01
Full Text Available This work is concerned with the derivation of the Green’s function for Landau-quantized carriers in the Group-VI dichalcogenides. In the spatially homogeneous case, the Green’s function is separated into a Peierls phase factor and a translationally invariant part which is determined in a closed form integral representation involving only elementary functions. The latter is expanded in an eigenfunction series of Laguerre polynomials. These results for the retarded Green’s function are presented in both position and momentum representations, and yet another closed form representation is derived in circular coordinates in terms of the Bessel wave function of the second kind (not to be confused with the Bessel function. The case of a quantum wire is also addressed, representing the quantum wire in terms of a model one-dimensional δ(x-potential profile. This retarded Green’s function for propagation directly along the wire is determined exactly in terms of the corresponding Green’s function for the system without the δ(x-potential, and the Landau quantized eigenenergy dispersion relation is examined. The thermodynamic Green’s function for the dichalcogenide carriers in a normal magnetic field is formulated here in terms of its spectral weight, and its solution is presented in a momentum/integral representation involving only elementary functions, which is subsequently expanded in Laguerre eigenfunctions and presented in both momentum and position representations.
A fully model-based MPC solution including VSB shot dose assignment and shape correction
Bork, Ingo; Buck, Peter; Reddy, Murali; Durvasula, Bhardwaj
2015-10-01
The value of using multiple dose levels for individual shots on VSB (Variable Shaped Beam) mask writers has been demonstrated earlier [1][2]. The main advantage of modulating dose on a per shot basis is the fact that higher dose levels can be used selectively for critical features while other areas of the mask with non-critical feature types can be exposed at lower dose levels. This reduces the amount of backscattering and mask write time penalty compared to a global overdose-undersize approach. While dose assignment to certain polygons or parts of polygons (VSB shots) can easily be accomplished via DRC rules on layers with limited shape variations like contact or VIA layers, it can be challenging to come up with consistent rules for layers consisting of a very broad range of shapes, generally found on metal layers. This work introduces a method for fully model-based modulation of shot dose for VSB machines supporting between two and eight dose levels and demonstrates results achieved with this method.
Pilgrim, Matthew G.; Lengyel, Imre; Lanzirotti, Antonio; Newville, Matt; Fearn, Sarah; Emri, Eszter; Knowles, Jonathan C.; Messinger, Jeffrey D.; Read, Russell W.; Guidry, Clyde; Curcio, Christine A.
2017-01-01
Purpose Extracellular deposits containing hydroxyapatite, lipids, proteins, and trace metals that form between the basal lamina of the RPE and the inner collagenous layer of Bruch's membrane are hallmarks of early AMD. We examined whether cultured RPE cells could produce extracellular deposits containing all of these molecular components. Methods Retinal pigment epithelium cells isolated from freshly enucleated porcine eyes were cultured on Transwell membranes for up to 6 months. Deposit composition and structure were characterized using light, fluorescence, and electron microscopy; synchrotron x-ray diffraction and x-ray fluorescence; secondary ion mass spectroscopy; and immunohistochemistry. Results Apparently functional primary RPE cells, when cultured on 10-μm-thick inserts with 0.4-μm-diameter pores, can produce sub-RPE deposits that contain hydroxyapatite, lipids, proteins, and trace elements, without outer segment supplementation, by 12 weeks. Conclusions The data suggest that sub-RPE deposit formation is initiated, and probably regulated, by the RPE, as well as the loss of permeability of the Bruch's membrane and choriocapillaris complex associated with age and early AMD. This cell culture model of early AMD lesions provides a novel system for testing new therapeutic interventions against sub-RPE deposit formation, an event occurring well in advance of the onset of vision loss. PMID:28146236
Landau quantized dynamics and spectra for group-VI dichalcogenides, including a model quantum wire
Horing, Norman J. M.
2017-06-01
This work is concerned with the derivation of the Green's function for Landau-quantized carriers in the Group-VI dichalcogenides. In the spatially homogeneous case, the Green's function is separated into a Peierls phase factor and a translationally invariant part which is determined in a closed form integral representation involving only elementary functions. The latter is expanded in an eigenfunction series of Laguerre polynomials. These results for the retarded Green's function are presented in both position and momentum representations, and yet another closed form representation is derived in circular coordinates in terms of the Bessel wave function of the second kind (not to be confused with the Bessel function). The case of a quantum wire is also addressed, representing the quantum wire in terms of a model one-dimensional δ (x ) -potential profile. This retarded Green's function for propagation directly along the wire is determined exactly in terms of the corresponding Green's function for the system without the δ (x ) -potential, and the Landau quantized eigenenergy dispersion relation is examined. The thermodynamic Green's function for the dichalcogenide carriers in a normal magnetic field is formulated here in terms of its spectral weight, and its solution is presented in a momentum/integral representation involving only elementary functions, which is subsequently expanded in Laguerre eigenfunctions and presented in both momentum and position representations.
Terrain Model Registration for Single Cycle Instrument Placement
Deans, Matthew; Kunz, Clay; Sargent, Randy; Pedersen, Liam
2003-01-01
This paper presents an efficient and robust method for registration of terrain models created using stereo vision on a planetary rover. Our approach projects two surface models into a virtual depth map, rendering the models as they would be seen from a single range sensor. Correspondence is established based on which points project to the same location in the virtual range sensor. A robust norm of the deviations in observed depth is used as the objective function, and the algorithm searches for the rigid transformation which minimizes the norm. An initial coarse search is done using rover pose information from odometry and orientation sensing. A fine search is done using Levenberg-Marquardt. Our method enables a planetary rover to keep track of designated science targets as it moves, and to hand off targets from one set of stereo cameras to another. These capabilities are essential for the rover to autonomously approach a science target and place an instrument in contact in a single command cycle.
Evaluation of a murine single-blood-injection SAH model.
Directory of Open Access Journals (Sweden)
Marcel A Kamp
Full Text Available The molecular pathways underlying the pathogenesis after subarachnoid haemorrhage (SAH are poorly understood and continue to be a matter of debate. A valid murine SAH injection model is not yet available but would be the prerequisite for further transgenic studies assessing the mechanisms following SAH. Using the murine single injection model, we examined the effects of SAH on regional cerebral blood flow (rCBF in the somatosensory (S1 and cerebellar cortex, neuro-behavioural and morphological integrity and changes in quantitative electrocorticographic and electrocardiographic parameters. Micro CT imaging verified successful blood delivery into the cisterna magna. An acute impairment of rCBF was observed immediately after injection in the SAH and after 6, 12 and 24 hours in the S1 and 6 and 12 hours after SAH in the cerebellum. Injection of blood into the foramen magnum reduced telemetric recorded total ECoG power by an average of 65%. Spectral analysis of ECoGs revealed significantly increased absolute delta power, i.e., slowing, cortical depolarisations and changes in ripples and fast ripple oscillations 12 hours and 24 hours after SAH. Therefore, murine single-blood-injection SAH model is suitable for pathophysiological and further molecular analysis following SAH.
Directory of Open Access Journals (Sweden)
Niko Schäpke
2014-07-01
Full Text Available Sustainability transitions require altered individual behaviors. Policies aimed at changing people’s consumption behavior are designed according to efficiency, consistency, and sufficiency principles. Taking into account shortcomings of the first two principles, this paper specifically addresses the sufficiency principle. Sufficiency policies are not very popular due to the fear that they may impede quality of life. This fear might be eased when highlighting the motivational side of sustainable behavior, such as the wish to care for future generations and the world’s poor. This article uses the capability approach (CA, developed primarily by Nobel-laureate economist Amartya Sen (1987a and philosopher Martha Nussbaum (1993, 2000, to a include the differentiation between self- and other-oriented goals and behavior, b build on its demonstrated success in assessing quality of life, and c assess the sustainability of behavior and policies. These three facets make CA suitable to analyze the effectiveness of sufficiency policies on sustainability and quality of life. To better understand the motivational side of sustainable behavior, CA is here for the first time enriched through approaches from environmental psychology. This enables us to highlight the idea of intrinsic empowerment as a building block for sufficiency policies. We close the article by highlighting further avenues for research.
Poisson-Fermi model of single ion activities in aqueous solutions
Liu, Jinn-Liang; Eisenberg, Bob
2015-09-01
A Poisson-Fermi model is proposed for calculating activity coefficients of single ions in strong electrolyte solutions based on the experimental Born radii and hydration shells of ions in aqueous solutions. The steric effect of water molecules and interstitial voids in the first and second hydration shells play an important role in our model. The screening and polarization effects of water are also included in the model that can thus describe spatial variations of dielectric permittivity, water density, void volume, and ionic concentration. The activity coefficients obtained by the Poisson-Fermi model with only one adjustable parameter are shown to agree with experimental data, which vary nonmonotonically with salt concentrations.
A single-site multipole model for liquid water
Tran, Kelly N.; Tan, Ming-Liang; Ichiye, Toshiko
2016-07-01
Accurate and efficient empirical potential energy models that describe the atomistic interactions between water molecules in the liquid phase are essential for computer simulations of many problems in physics, chemistry, and biology, especially when long length or time scales are important. However, while models with non-polarizable partial charges at four or five sites in a water molecule give remarkably good values for certain properties, deficiencies have been noted in other properties and increasing the number of sites decreases computational efficiency. An alternate approach is to utilize a multipole expansion of the electrostatic potential due to the molecular charge distribution, which is exact outside the charge distribution in the limits of infinite distances or infinite orders of multipoles while partial charges are a qualitative representation of electron density as point charges. Here, a single-site multipole model of water is presented, which is as fast computationally as three-site models but is also more accurate than four- and five-site models. The dipole, quadrupole, and octupole moments are from quantum mechanical-molecular mechanical calculations so that they account for the average polarization in the liquid phase, and represent both the in-plane and out-of-plane electrostatic potentials of a water molecule in the liquid phase. This model gives accurate thermodynamic, dynamic, and dielectric properties at 298 K and 1 atm, as well as good temperature and pressure dependence of these properties.
Gravity research on plants: use of single cell experimental models
Directory of Open Access Journals (Sweden)
Youssef eChebli
2011-09-01
Full Text Available Future space missions and implementation of permanent bases on Moon and Mars will greatly depend on the availability of ambient air and sustainable food supply. Therefore, understanding the effects of altered gravity conditions on plant metabolism and growth is vital for space missions and extra-terrestrial human existence. In this mini-review we summarize how plant cells are thought to perceive changes in magnitude and orientation of the gravity vector. The particular advantages of several single celled model systems for gravity research are explored and an overview over recent advancements and potential use of these systems is provided.
Modeling of Self-Pumped Singly Resonant Optical Parametric Oscillator
Deng, Chengxian
2016-01-01
A model of the steady-state operating, self-pumped singly resonant optical parametric oscillator (SPSRO) has been developed. The characteristics of quasi three-level laser gain medium pumped longitudinally have been taken into account. The characteristics of standing wave cavity, reabsorption losses, focusing Gaussian beams of the pump laser, fundamental laser and signal wave have been considered in the analyses. Furthermore, The power characteristics of threshold and efficiency have been analyzed, employing a Yb3+-doped periodically poled lithium niobate co-doped with MgO (Yb3+:MgO:PPLN) as the medium of laser gain and second-order nonlinear crystal.
Modal analysis based equivalent circuit model and its verification for a single cMUT cell
Mao, S. P.; Rottenberg, X.; Rochus, V.; Czarnecki, P.; Helin, P.; Severi, S.; Nauwelaers, B.; Tilmans, H. A. C.
2017-03-01
This paper presents the lumped equivalent circuit model and its verification of both transmission and reception properties of a single cell capacitive micromachined ultrasonic transducer (cMUT), which is operating in a non-collapse small signal region. The derivation of this equivalent circuit model is based on the modal analysis techniques, harmonic modes are included by using the mode superposition method; and thus a wide frequency range response of the cMUT cell can be simulated by our equivalent circuit model. The importance of the cross modal coupling between different eigenmodes of a cMUT cell is discussed by us for the first time. In this paper the development of this model is only illustrated by a single circular cMUT cell under a uniform excitation. Extension of this model and corresponding results under a more generalized excitation will be presented in our upcoming publication (Mao et al 2016 Proc. IEEE Int. Ultrasonics Symp.). This model is verified by both finite element method (FEM) simulation and experimental characterizations. Results predicted by our model are in a good agreement with the FEM simulation results, and this works for a single cMUT cell operated in either transmission or reception. Results obtained from the model also rather match the experimental results of the cMUT cell. This equivalent circuit model provides an easy and precise way to rapidly predict the behaviors of cMUT cells.
Constitutive Model for an FCC Single-Crystal Material
Institute of Scientific and Technical Information of China (English)
DING Zhi-ping; LIU Yi-lun; YIN Ze-yong; YANG Zhi-guo; CHENG Xiao-ming
2006-01-01
Talking into account the effects that the components of tension stresses couple with components of torsion stresses when off-axis loads are applied to orthotropic materials.Hill's yield criterion for plastically orthotropic solids is modified by adding an invariant that is composed of the product item of quadratic components of the deviatoric siress tensor,and a new yield criteflon is put forward in terms of the characteristics of the face-centered cubic(FCC) single-crystal material.The correlation of prediction and experiments is very good.and the new criterion is used to predict the yield stresses of an intemal single-crystal,Nickel-based superalloy,DD3,which is more accurate than that Of Hill's at 760°C.Equivalent stress and strain that adapt to the new criterion are defined.Thinking of the yield function as a plastic potential function from the associated flow rule.the elastic-plastic constitutive model for the FCC single-crystal material is constructed,and the corresponding elastic-plastic matrix iseduced.The new yield criterion and its equivalent stress and strain will be reduced to Von Mises' yield criterion and corresponding equivalent stress and strain for isotropic materials.
Phase lagging model of brain response to external stimuli - modeling of single action potential
Seetharaman, Karthik; Kulish, Vladimir V
2012-01-01
In this paper we detail a phase lagging model of brain response to external stimuli. The model is derived using the basic laws of physics like conservation of energy law. This model eliminates the paradox of instantaneous propagation of the action potential in the brain. The solution of this model is then presented. The model is further applied in the case of a single neuron and is verified by simulating a single action potential. The results of this modeling are useful not only for the fundamental understanding of single action potential generation, but also they can be applied in case of neuronal interactions where the results can be verified against the real EEG signal.
Directory of Open Access Journals (Sweden)
Etsuji Suzuki
Full Text Available BACKGROUND: Multilevel analyses are ideally suited to assess the effects of ecological (higher level and individual (lower level exposure variables simultaneously. In applying such analyses to measures of ecologies in epidemiological studies, individual variables are usually aggregated into the higher level unit. Typically, the aggregated measure includes responses of every individual belonging to that group (i.e. it constitutes a self-included measure. More recently, researchers have developed an aggregate measure which excludes the response of the individual to whom the aggregate measure is linked (i.e. a self-excluded measure. In this study, we clarify the substantive and technical properties of these two measures when they are used as exposures in multilevel models. METHODS: Although the differences between the two aggregated measures are mathematically subtle, distinguishing between them is important in terms of the specific scientific questions to be addressed. We then show how these measures can be used in two distinct types of multilevel models-self-included model and self-excluded model-and interpret the parameters in each model by imposing hypothetical interventions. The concept is tested on empirical data of workplace social capital and employees' systolic blood pressure. RESULTS: Researchers assume group-level interventions when using a self-included model, and individual-level interventions when using a self-excluded model. Analytical re-parameterizations of these two models highlight their differences in parameter interpretation. Cluster-mean centered self-included models enable researchers to decompose the collective effect into its within- and between-group components. The benefit of cluster-mean centering procedure is further discussed in terms of hypothetical interventions. CONCLUSIONS: When investigating the potential roles of aggregated variables, researchers should carefully explore which type of model-self-included or self
Bajzer, Željko; Gibbons, Simon J; Coleman, Heidi D; Linden, David R; Farrugia, Gianrico
2015-08-01
Noninvasive breath tests for gastric emptying are important techniques for understanding the changes in gastric motility that occur in disease or in response to drugs. Mice are often used as an animal model; however, the gamma variate model currently used for data analysis does not always fit the data appropriately. The aim of this study was to determine appropriate mathematical models to better fit mouse gastric emptying data including when two peaks are present in the gastric emptying curve. We fitted 175 gastric emptying data sets with two standard models (gamma variate and power exponential), with a gamma variate model that includes stretched exponential and with a proposed two-component model. The appropriateness of the fit was assessed by the Akaike Information Criterion. We found that extension of the gamma variate model to include a stretched exponential improves the fit, which allows for a better estimation of T1/2 and Tlag. When two distinct peaks in gastric emptying are present, a two-component model is required for the most appropriate fit. We conclude that use of a stretched exponential gamma variate model and when appropriate a two-component model will result in a better estimate of physiologically relevant parameters when analyzing mouse gastric emptying data.
Comparison of statistical models to estimate daily milk yield in single milking testing schemes
Directory of Open Access Journals (Sweden)
Marija Klopcˇic
2010-01-01
Full Text Available Different statistical models were compared to estimate daily milk yield from morning or evening milking test results. The experiment was conducted on 14 family farms with 325 recorded cows. The amount of explained variance was higher for models including the effects of partial milk yield, the interval between successive milking, the interaction between partial milk yield and the milking interval and the farm (R2 = 0.976 for AM, R2 = 0.956 for PM than for models including partial milk yield effect only (R2 = 0.957 for AM, R2 = 0.937 for PM. Estimates of daily milk yield from linear models were more accurate than those obtained by doubling single milking weights. The results show that more complex model gives the best fit to the data. Differences between models according to determination and correlation coefficient were minor. Further investigations on larger sets of data are needed to draw more general conclusion.
Modelling of single bubble-dynamics and thermal effects
Papoulias, D.; Gavaises, M.
2015-12-01
This paper evaluates the solution effects of different Rayleigh-Plesset models (R-P) for simulating the growth/collapse dynamics and thermal behaviour of homogeneous gas bubbles. The flow inputs used for the discrete cavitation bubble calculations are obtained from Reynolds-averaged Navier-Stokes simulations (RANS), performed in high-pressure nozzle holes. Parametric 1-D results are presented for the classical thermal R-P equation [1] as well as for refined models which incorporated compressibility corrections and thermal effects [2, 3]. The thermal bubble model is coupled with the energy equation, which provides the temperature of the bubble as a function of conduction/convection and radiation heat-transfer mechanisms. For approximating gas pressure variations a high-order virial equation of state (EOS) was used, based on Helmholtz free energy principle [4]. The coded thermal R-P model was validated against experimental measurements [5] and model predictions [6] reported in single-bubble sonoluminescence (SBSL).
DEFF Research Database (Denmark)
Flores Alsina, Xavier; Comas, J.; Rodriquez-Roda, I.
2009-01-01
The main objective of this paper is to demonstrate how including the occurrence of filamentous bulking sludge in a secondary clarifier model will affect the predicted process performance during the simulation of WWTPs. The IWA Benchmark Simulation Model No. 2 (BSM2) is hereby used as a simulation...
Mathematical modelling of the combustion of a single wood particle
Energy Technology Data Exchange (ETDEWEB)
Porteiro, J.; Miguez, J.L.; Granada, E.; Moran, J.C. [Departamento de Ingenieria Mecanica, Maquinas y Motores Termicos y Fluidos. Universidad de Vigo, Lagoas Marcosende 9 36200 Vigo (Spain)
2006-01-15
A mathematical model describing the thermal degradation of densified biomass particles is presented here. The model uses a novel discretisation scheme and combines intra-particle combustion processes with extra-particle transport processes, thereby including thermal and diffusional control mechanisms. The influence of structural changes on the physical-thermal properties of wood in its different stages is studied together with shrinkage of the particle during its degradation. The model is used to compare the predicted data with data on the mass loss dynamics and internal temperature of several particles from previous works and relevant literature, with good agreement. (author)
Delay driven spatiotemporal chaos in single species population dynamics models.
Jankovic, Masha; Petrovskii, Sergei; Banerjee, Malay
2016-08-01
Questions surrounding the prevalence of complex population dynamics form one of the central themes in ecology. Limit cycles and spatiotemporal chaos are examples that have been widely recognised theoretically, although their importance and applicability to natural populations remains debatable. The ecological processes underlying such dynamics are thought to be numerous, though there seems to be consent as to delayed density dependence being one of the main driving forces. Indeed, time delay is a common feature of many ecological systems and can significantly influence population dynamics. In general, time delays may arise from inter- and intra-specific trophic interactions or population structure, however in the context of single species populations they are linked to more intrinsic biological phenomena such as gestation or resource regeneration. In this paper, we consider theoretically the spatiotemporal dynamics of a single species population using two different mathematical formulations. Firstly, we revisit the diffusive logistic equation in which the per capita growth is a function of some specified delayed argument. We then modify the model by incorporating a spatial convolution which results in a biologically more viable integro-differential model. Using the combination of analytical and numerical techniques, we investigate the effect of time delay on pattern formation. In particular, we show that for sufficiently large values of time delay the system's dynamics are indicative to spatiotemporal chaos. The chaotic dynamics arising in the wake of a travelling population front can be preceded by either a plateau corresponding to dynamical stabilisation of the unstable equilibrium or by periodic oscillations.
Directory of Open Access Journals (Sweden)
Christopher P. Paolini
2012-01-01
Full Text Available The ideal gas (IG model is probably the most well-known gas models in engineering thermodynamics. In this paper, we extend the IG model into an ideal gas equilibrium (IGE model mixture model by incorporating chemical equilibrium calculations as part of the state evaluation. Through a simple graphical interface, users can set the atomic composition of a gas mixture. We have integrated this model into a thermodynamic web portal TEST (http://thermofluids.sdsu.edu/ that contains Java applets for various models for properties of pure substances. In the state panel of the IGE model, the known thermodynamic properties are entered. For a given pressure and temperature, the mixture's Gibbs function is minimized subject to atomic constraints and the equilibrium composition along with thermodynamic properties of the mixture are calculated and displayed. What is unique about this approach is that equilibrium computations are performed in the background, without requiring any major change in the familiar user interface used in other state daemons. Properties calculated by this equilibrium state daemon are compared with results from other established applications such as NASA CEA and STANJAN. Also, two different algorithms, an iterative approach and a direct approach based on minimizing different thermodynamic functions in different situation, are compared.
Reerink, Thomas J.; Jan Van De Berg, Willem; Van De Wal, Roderik S W
2016-01-01
This paper accompanies the second OBLIMAP open-source release. The package is developed to map climate fields between a general circulation model (GCM) and an ice sheet model (ISM) in both directions by using optimal aligned oblique projections, which minimize distortions. The curvature of the surfa
Integrated Optimal Model of Structure and Control of the Single Arm Manipulator
Institute of Scientific and Technical Information of China (English)
ZHU Deng-lin; JIANG Tao; WEI Jun-hua; WANG An-lin; WANG Shi-gang
2006-01-01
The integrated optimal design of mechanical and control system is discussed in terms of the performance requirement and configuration for the single arm flexible manipulator. By combination of dynamics of flexible structure and control theory, a PD feedback control system, which minimizes the settling time, has been designed. Then, the viable region of poles of the PD closed-loop control system is decided according to overshoot and the settling time, and an integrated optimal model of structure and control of single arm manipu lator is presented. Finally, the parameters of structure and control system are simultaneously optimized withrespect to objective function including the moment of inertia and the control effort of system.
Single photon time transfer link model for GNSS satellites
Vacek, Michael; Michalek, Vojtech; Peca, Marek; Prochazka, Ivan; Blazej, Josef
2015-05-01
The importance of optical time transfer serving as a complement to traditional microwave links, has been attested for GNSSes and for scientific missions. Single photon time transfer (SPTT) is a process, allowing to compare (subtract) time readings of two distant clocks. Such a comparison may be then used to synchronize less accurate clock to a better reference, to perform clock characterization and calibration, to calculate mean time out of ensemble of several clocks, displaced in space. The single-photon time transfer is well established in field of space geodesy, being supported by passive retro-reflectors within space segment of five known GNSSes. A truly two-way, active terminals work aboard of Jason-2 (T2L2) - multiphoton operation, GNSS Beidou (Compass) - SPTT, and are going to be launched within recent ACES project (ELT) - SPTT, and GNSS GLONASS - multiphoton operation. However, there is still missing comprehensive theoretical model of two-way (using satellite receiver and retroreflector) SPTT link incorporating all crucial parameters of receiver (both ground and space segment receivers), transmitter, atmosphere effects on uplink and downlink path, influence of retroreflector. The input to calculation of SPTT link performance will be among others: link budget (distance, power, apertures, beam divergence, attenuation, scattering), propagating medium (atmosphere scintillation, beam wander, etc.), mutual Tx/Rx velocity, wavelength. The SPTT model will be evaluated without the properties of real components. These will be added in the further development. The ground-to-space SPTT link performance of typical scenarios are modeled. This work is a part of the ESA study "Comparison of optical time-transfer links."
Randall, David A.; Cripe, Douglas G.
1999-10-01
We discuss alternative methods for prescribing advective tendencies in single-column models (SCMs) and cloud system models. These include "revealed forcing," in which the total advective tendency is prescribed from observations; "horizontal advective forcing," in which the horizontal advective tendencies are prescribed, together with the observed vertical motion which is combined with the predicted sounding to determine the tendencies due to vertical advection; and "relaxation forcing," in which the horizontal advective tendencies are computed by relaxing the sounding toward the observed upstream sounding, with a relaxation timescale determined by the time required for the wind to carry parcels across the grid column. When relaxation forcing is used, the horizontal advective tendencies can be diagnosed from the model output and compared with the corresponding observed tendencies. We present SCM results to illustrate these three forcing methods, based on data from several field experiments in both the tropics and the midlatitudes. Each method is shown to have its strengths and weaknesses. Overall, the results presented here do not show unambiguous differences between revealed forcing and horizontal advective forcing. The two methods appear to be generally comparable. Revealed forcing may therefore be preferred for its simplicity. Relaxation forcing guarantees realistic soundings of the state variables but can produce large errors in parameterized processes which are driven by rates (e.g., fluxes) rather than states. In particular, relaxation forcing gives large errors in the precipitation rate in this model. We demonstrate that relaxation forcing leads to unrealistically high (low) precipitation in versions of the model which tend to produce unrealistically dry (humid) soundings. The observed horizontal advective tendencies in the tropics are so weak, especially for temperature, that small absolute errors in the diabatic tendencies diagnosed with relaxation forcing
Energy Technology Data Exchange (ETDEWEB)
Cimpoesu, Dorin, E-mail: cdorin@uaic.ro; Stoleriu, Laurentiu; Stancu, Alexandru [Department of Physics, Alexandru Ioan Cuza University of Iasi, Iasi 700506 (Romania)
2013-12-14
We propose a generalized Stoner-Wohlfarth (SW) type model to describe various experimentally observed angular dependencies of the switching field in non-single-domain magnetic particles. Because the nonuniform magnetic states are generally characterized by complicated spin configurations with no simple analytical description, we maintain the macrospin hypothesis and we phenomenologically include the effects of nonuniformities only in the anisotropy energy, preserving as much as possible the elegance of SW model, the concept of critical curve and its geometric interpretation. We compare the results obtained with our model with full micromagnetic simulations in order to evaluate the performance and limits of our approach.
Energy Technology Data Exchange (ETDEWEB)
Defraene, Gilles, E-mail: gilles.defraene@uzleuven.be [Radiation Oncology Department, University Hospitals Leuven, Leuven (Belgium); Van den Bergh, Laura [Radiation Oncology Department, University Hospitals Leuven, Leuven (Belgium); Al-Mamgani, Abrahim [Department of Radiation Oncology, Erasmus Medical Center - Daniel den Hoed Cancer Center, Rotterdam (Netherlands); Haustermans, Karin [Radiation Oncology Department, University Hospitals Leuven, Leuven (Belgium); Heemsbergen, Wilma [Netherlands Cancer Institute - Antoni van Leeuwenhoek Hospital, Amsterdam (Netherlands); Van den Heuvel, Frank [Radiation Oncology Department, University Hospitals Leuven, Leuven (Belgium); Lebesque, Joos V. [Netherlands Cancer Institute - Antoni van Leeuwenhoek Hospital, Amsterdam (Netherlands)
2012-03-01
Purpose: To study the impact of clinical predisposing factors on rectal normal tissue complication probability modeling using the updated results of the Dutch prostate dose-escalation trial. Methods and Materials: Toxicity data of 512 patients (conformally treated to 68 Gy [n = 284] and 78 Gy [n = 228]) with complete follow-up at 3 years after radiotherapy were studied. Scored end points were rectal bleeding, high stool frequency, and fecal incontinence. Two traditional dose-based models (Lyman-Kutcher-Burman (LKB) and Relative Seriality (RS) and a logistic model were fitted using a maximum likelihood approach. Furthermore, these model fits were improved by including the most significant clinical factors. The area under the receiver operating characteristic curve (AUC) was used to compare the discriminating ability of all fits. Results: Including clinical factors significantly increased the predictive power of the models for all end points. In the optimal LKB, RS, and logistic models for rectal bleeding and fecal incontinence, the first significant (p = 0.011-0.013) clinical factor was 'previous abdominal surgery.' As second significant (p = 0.012-0.016) factor, 'cardiac history' was included in all three rectal bleeding fits, whereas including 'diabetes' was significant (p = 0.039-0.048) in fecal incontinence modeling but only in the LKB and logistic models. High stool frequency fits only benefitted significantly (p = 0.003-0.006) from the inclusion of the baseline toxicity score. For all models rectal bleeding fits had the highest AUC (0.77) where it was 0.63 and 0.68 for high stool frequency and fecal incontinence, respectively. LKB and logistic model fits resulted in similar values for the volume parameter. The steepness parameter was somewhat higher in the logistic model, also resulting in a slightly lower D{sub 50}. Anal wall DVHs were used for fecal incontinence, whereas anorectal wall dose best described the other two endpoints
Spatial distribution of mineral dust single scattering albedo based on DREAM model
Kuzmanoski, Maja; Ničković, Slobodan; Ilić, Luka
2016-04-01
Mineral dust comprises a significant part of global aerosol burden. There is a large uncertainty in estimating role of dust in Earth's climate system, partly due to poor characterization of its optical properties. Single scattering albedo is one of key optical properties determining radiative effects of dust particles. While it depends on dust particle sizes, it is also strongly influenced by dust mineral composition, particularly the content of light-absorbing iron oxides and the mixing state (external or internal). However, an assumption of uniform dust composition is typically used in models. To better represent single scattering albedo in dust atmospheric models, required to increase accuracy of dust radiative effect estimates, it is necessary to include information on particle mineral content. In this study, we present the spatial distribution of dust single scattering albedo based on the Dust Regional Atmospheric Model (DREAM) with incorporated particle mineral composition. The domain of the model covers Northern Africa, Middle East and the European continent, with horizontal resolution set to 1/5°. It uses eight particle size bins within the 0.1-10 μm radius range. Focusing on dust episode of June 2010, we analyze dust single scattering albedo spatial distribution over the model domain, based on particle sizes and mineral composition from model output; we discuss changes in this optical property after long-range transport. Furthermore, we examine how the AERONET-derived aerosol properties respond to dust mineralogy. Finally we use AERONET data to evaluate model-based single scattering albedo. Acknowledgement We would like to thank the AERONET network and the principal investigators, as well as their staff, for establishing and maintaining the AERONET sites used in this work.
Computational modeling of single particle scattering over large distances
Rapp, Rebecca; Plumley, Rajan; McCracken, Michael
2016-09-01
We present a Monte Carlo simulation of the propagation of a single particle through a large three-dimensional volume under the influence of individual scattering events. In such systems, short paths can be quickly and accurately simulated using random walks defined by individual scattering parameters, but the simulation time greatly increases as the size of the space grows. We present a method for reducing the overall simulation time by restricting the simulation to a cube of unit length; each `cell' is characterized by a set of parameters which dictate the distributions of allowable step lengths and polar scattering angles. We model propagation over large distances by constructing a lattice of cells with physical parameters that depend on position, such that the full set would represent a space within the entire volume available to the particle. With these, we propose the use of Markov chains to determine a probable path for the particle, thereby removing the need to simulate every step in the particle's path. For a single particle with constant velocity, we can use the step statistics to determine the travel time of the particle. We investigate the effect of scattering parameters such as average step distance and possible scattering angles on the probabilities of a cell.
Component-Based Model for Single-Plate Shear Connections with Pretension and Pinched Hysteresis.
Weigand, Jonathan M
2017-02-01
Component-based connection models provide a natural framework for modeling the complex behaviors of connections under extreme loads by capturing both the individual behaviors of the connection components, such as the bolt, shear plate, and beam web, and the complex interactions between those components. Component-based models also provide automatic coupling between the in-plane flexural and axial connection behaviors, a feature that is essential for modeling the behavior of connections under column removal. This paper presents a new component-based model for single-plate shear connections that includes the effects of pre-tension in the bolts and provides the capability to model standard and slotted holes. The component-based models are exercised under component-level deformations calculated from the connection demands via a practical rigid-body displacement model, so that the results of the presented modeling approach remains hand-calculable. Validation cases are presented for connections subjected to both seismic and column removal loading. These validation cases show that the component-based model is capable of predicting the response of single-plate shear connections for both seismic and column removal loads.
Ensemble single column model validation in the tropical western Pacific
Hume, Timothy; Jakob, Christian
2007-05-01
Single column models (SCMs) are useful tools for the evaluation of parameterizations of radiative and moist processes used in general circulation models (GCMs). SCM applications have usually been limited to regions where high-quality observations are available to derive the necessary boundary condition or forcing data. Recently, researchers have developed techniques for deriving SCM forcing data from other data sets, such as NWP (numerical weather prediction) analyses. The uncertainties inherent in these forcing data products have an unknown and possibly significant effect on SCM runs. This paper shows how an ensemble SCM (ESCM) approach can be used to minimize the uncertainty in SCM simulations resulting from uncertainties in the forcing data. Some innovative evaluation techniques have been applied to ESCM runs at the tropical western Pacific Atmospheric Radiation Measurement (ARM) program sites at Manus Island and Nauru. These techniques, making use of traditional ensemble verification methods and objectively determined cloud regimes, are shown to be able to highlight parameterization deficiencies and provide a useful tool for testing new or improved model parameterizations.
Mathematical modeling of a single stage ultrasonically assisted distillation process.
Mahdi, Taha; Ahmad, Arshad; Ripin, Adnan; Abdullah, Tuan Amran Tuan; Nasef, Mohamed M; Ali, Mohamad W
2015-05-01
The ability of sonication phenomena in facilitating separation of azeotropic mixtures presents a promising approach for the development of more intensified and efficient distillation systems than conventional ones. To expedite the much-needed development, a mathematical model of the system based on conservation principles, vapor-liquid equilibrium and sonochemistry was developed in this study. The model that was founded on a single stage vapor-liquid equilibrium system and enhanced with ultrasonic waves was coded using MATLAB simulator and validated with experimental data for ethanol-ethyl acetate mixture. The effects of both ultrasonic frequency and intensity on the relative volatility and azeotropic point were examined, and the optimal conditions were obtained using genetic algorithm. The experimental data validated the model with a reasonable accuracy. The results of this study revealed that the azeotropic point of the mixture can be totally eliminated with the right combination of sonication parameters and this can be utilized in facilitating design efforts towards establishing a workable ultrasonically intensified distillation system.
Model Based Control of Single-Phase Marine Cooling Systems
DEFF Research Database (Denmark)
Hansen, Michael
2014-01-01
”, it is shown that the part of the proposed model relating to the thermodynamics is dynamically accurate and with relatively small steady state deviations. The same is shown for a linear version of the part of the model governing the hydraulics of the cooling system. On the subject of control, the main focus...... in this work is on the development of a nonlinear robust control design. The design is based on principles from feedback. linearization to compensate for nonlinearities as well as transport delays by including a delay estimate in the feedback law. To deal with the uncertainties that emerged from the feedback...
Modelling Iteration Convergence Condition for Single SAR Image Geocoding
Dong, Yuting; Liao, Minghsheng; Zhang, Lu; Shi, Xuguo
2014-11-01
Single SAR image geocoding is to determine the ground coordinate for each pixel in the SAR image assisted with an external DEM. Due to the uncertainty of the elevation of each pixel in SAR image, an iterative procedure is needed, which suffers from the problem of divergence in some difficult areas such as shaded and serious layover areas. This paper aims at theoretically analysing the convergence conditions that has not been intensively studied till now. To make the discussion easier, the Range-Doppler (RD) model is simplified and then the general surface is simplified into a planar surface. Mathematical deduction is carried out to derive the convergence conditions and the impact factors for the convergence speed are analysed. The theoretical findings are validated by experiments for both simulated and real surfaces.
Application for Single Price Auction Model (SPA) in AC Network
Wachi, Tsunehisa; Fukutome, Suguru; Chen, Luonan; Makino, Yoshinori; Koshimizu, Gentarou
This paper aims to develop a single price auction model with AC transmission network, based on the principle of maximizing social surplus of electricity market. Specifically, we first formulate the auction market as a nonlinear optimization problem, which has almost the same form as the conventional optimal power flow problem, and then propose an algorithm to derive both market clearing price and trade volume of each player even for the case of market-splitting. As indicated in the paper, the proposed approach can be used not only for the price evaluation of auction or bidding market but also for analysis of bidding strategy, congestion effect and other constraints or factors. Several numerical examples are used to demonstrate effectiveness of our method.
Directory of Open Access Journals (Sweden)
Smieszek Timo
2009-11-01
Full Text Available Abstract Background Mathematical models and simulations of disease spread often assume a constant per-contact transmission probability. This assumption ignores the heterogeneity in transmission probabilities, e.g. due to the varying intensity and duration of potentially contagious contacts. Ignoring such heterogeneities might lead to erroneous conclusions from simulation results. In this paper, we show how a mechanistic model of disease transmission differs from this commonly used assumption of a constant per-contact transmission probability. Methods We present an exposure-based, mechanistic model of disease transmission that reflects heterogeneities in contact duration and intensity. Based on empirical contact data, we calculate the expected number of secondary cases induced by an infector (i for the mechanistic model and (ii under the classical assumption of a constant per-contact transmission probability. The results of both approaches are compared for different basic reproduction numbers R0. Results The outcomes of the mechanistic model differ significantly from those of the assumption of a constant per-contact transmission probability. In particular, cases with many different contacts have much lower expected numbers of secondary cases when using the mechanistic model instead of the common assumption. This is due to the fact that the proportion of long, intensive contacts decreases in the contact dataset with an increasing total number of contacts. Conclusion The importance of highly connected individuals, so-called super-spreaders, for disease spread seems to be overestimated when a constant per-contact transmission probability is assumed. This holds particularly for diseases with low basic reproduction numbers. Simulations of disease spread should weight contacts by duration and intensity.
High-energy single diffractive dissociation of nucleons and the 3P-model applicability range
Energy Technology Data Exchange (ETDEWEB)
Godizov, A.A., E-mail: anton.godizov@gmail.com
2016-11-15
The adequacy of the triple-Pomeron interaction approximation (the 3P-model) for description of the high-energy single diffractive dissociation of nucleons is analyzed via application to the available experimental data on nucleon–nucleon scattering, including the recent results produced by CMS Collaboration which allow to estimate reliably the triple-Pomeron coupling value. It is argued that the total contribution of secondary Reggeon exchanges is not negligible up to the Tevatron energy.
Mathematical Model of Two Phase Flow in Natural Draft Wet-Cooling Tower Including Flue Gas Injection
Directory of Open Access Journals (Sweden)
Hyhlík Tomáš
2016-01-01
Full Text Available The previously developed model of natural draft wet-cooling tower flow, heat and mass transfer is extended to be able to take into account the flow of supersaturated moist air. The two phase flow model is based on void fraction of gas phase which is included in the governing equations. Homogeneous equilibrium model, where the two phases are well mixed and have the same velocity, is used. The effect of flue gas injection is included into the developed mathematical model by using source terms in governing equations and by using momentum flux coefficient and kinetic energy flux coefficient. Heat and mass transfer in the fill zone is described by the system of ordinary differential equations, where the mass transfer is represented by measured fill Merkel number and heat transfer is calculated using prescribed Lewis factor.
Raksharam; Dutta, Aloke K.
2017-04-01
In this paper, a unified analytical model for the drain current of a symmetric Double-Gate Junctionless Field-Effect Transistor (DG-JLFET) is presented. The operation of the device has been classified into four modes: subthreshold, semi-depleted, accumulation, and hybrid; with the main focus of this work being on the accumulation mode, which has not been dealt with in detail so far in the literature. A physics-based model, using a simplified one-dimensional approach, has been developed for this mode, and it has been successfully integrated with the model for the hybrid mode. It also includes the effect of carrier mobility degradation due to the transverse electric field, which was hitherto missing in the earlier models reported in the literature. The piece-wise models have been unified using suitable interpolation functions. In addition, the model includes two most important short-channel effects pertaining to DG-JLFETs, namely the Drain Induced Barrier Lowering (DIBL) and the Subthreshold Swing (SS) degradation. The model is completely analytical, and is thus computationally highly efficient. The results of our model have shown an excellent match with those obtained from TCAD simulations for both long- and short-channel devices, as well as with the experimental data reported in the literature.
Dipole model analysis of highest precision HERA data, including very low Q{sup 2}'s
Energy Technology Data Exchange (ETDEWEB)
Luszczak, A. [Cracow Univ. of Technology (Poland); Kowalski, H. [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)
2016-12-15
We analyse, within a dipole model, the final, inclusive HERA DIS cross section data in the low χ region, using fully correlated errors. We show, that these highest precision data are very well described within the dipole model framework starting from Q{sup 2} values of 3.5 GeV{sup 2} to the highest values of Q{sup 2}=250 GeV{sup 2}. To analyze the saturation effects we evaluated the data including also the very low 0.35including this region show a preference of the saturation ansatz.
McLerran, Larry
2016-01-01
We modify the McLerran-Venugopalan model to include only a finite number of sources of color charge. We argue that Coulombic interactions between these color charges generates a source-source correlation function that properly includes the effects of color charge screening, a generalization of Debye screening for the Color Glass Condensate. Such a model may be useful for computing angular harmonics of flow measured in high energy hadron collisions for small systems. In this paper we provide a basic formulation of the problem on a lattice.
Dynamic model of a micro-tubular solid oxide fuel cell stack including an integrated cooling system
Hering, Martin; Brouwer, Jacob; Winkler, Wolfgang
2017-02-01
A novel dynamic micro-tubular solid oxide fuel cell (MT-SOFC) and stack model including an integrated cooling system is developed using a quasi three-dimensional, spatially resolved, transient thermodynamic, physical and electrochemical model that accounts for the complex geometrical relations between the cells and cooling-tubes. The modeling approach includes a simplified tubular geometry and stack design including an integrated cooling structure, detailed pressure drop and gas property calculations, the electrical and physical constraints of the stack design that determine the current, as well as control strategies for the temperature. Moreover, an advanced heat transfer balance with detailed radiative heat transfer between the cells and the integrated cooling-tubes, convective heat transfer between the gas flows and the surrounding structures and conductive heat transfer between the solid structures inside of the stack, is included. The detailed model can be used as a design basis for the novel MT-SOFC stack assembly including an integrated cooling system, as well as for the development of a dynamic system control strategy. The evaluated best-case design achieves very high electrical efficiency between around 75 and 55% in the entire power density range between 50 and 550 mW /cm2 due to the novel stack design comprising an integrated cooling structure.
Directory of Open Access Journals (Sweden)
Cristian R. Munteanu
2010-07-01
Full Text Available Single nucleotide polymorphisms (SNPs can be used as inputs in disease computational studies such as pattern searching and classification models. Schizophrenia is an example of a complex disease with an important social impact. The multiple causes of this disease create the need of new genetic or proteomic patterns that can diagnose patients using biological information. This work presents a computational study of disease machine learning classification models using only single nucleotide polymorphisms at the HTR2A and DRD3 genes from Galician (Northwest Spain schizophrenic patients. These classification models establish for the first time, to the best knowledge of the authors, a relationship between the sequence of the nucleic acid molecule and schizophrenia (Quantitative Genotype – Disease Relationships that can automatically recognize schizophrenia DNA sequences and correctly classify between 78.3–93.8% of schizophrenia subjects when using datasets which include simulated negative subjects and a linear artificial neural network.
Non-line-of-sight ultraviolet single-scatter propagation model in random turbulent medium.
Xiao, Houfei; Zuo, Yong; Wu, Jian; Li, Yan; Lin, Jintong
2013-09-01
Non-line-of-sight (NLOS) ultraviolet communication (UVC) uses the atmosphere as a propagation medium. In previous literature, various scatter propagation models have been derived based on the premise that atmospheric turbulence was ignored and the atmosphere was considered as a turbid medium, also called random scatterers. In this Letter, a NLOS single-scatter propagation model is proposed to describe the singly scattered radiation in a turbulent medium, also called a random continuum, such as the clear atmosphere. The model is established based on the relationship between the scattered power and the characteristics of the random turbulent medium. The scattering cross section is further investigated in terms of different correlation distances and wavelengths. The received power dependence for NLOS UVC is also analyzed for different factors, including refractive-index structure parameter and transceiver range.
SINGLE PHASE ANALYTICAL MODELS FOR TERRY TURBINE NOZZLE
Energy Technology Data Exchange (ETDEWEB)
Zhao, Haihua; Zhang, Hongbin; Zou, Ling; O' Brien, James
2016-11-01
All BWR RCIC (Reactor Core Isolation Cooling) systems and PWR AFW (Auxiliary Feed Water) systems use Terry turbine, which is composed of the wheel with turbine buckets and several groups of fixed nozzles and reversing chambers inside the turbine casing. The inlet steam is accelerated through the turbine nozzle and impacts on the wheel buckets, generating work to drive the RCIC pump. As part of the efforts to understand the unexpected “self-regulating” mode of the RCIC systems in Fukushima accidents and extend BWR RCIC and PWR AFW operational range and flexibility, mechanistic models for the Terry turbine, based on Sandia National Laboratories’ original work, has been developed and implemented in the RELAP-7 code to simulate the RCIC system. RELAP-7 is a new reactor system code currently under development with the funding support from U.S. Department of Energy. The RELAP-7 code is a fully implicit code and the preconditioned Jacobian-free Newton-Krylov (JFNK) method is used to solve the discretized nonlinear system. This paper presents a set of analytical models for simulating the flow through the Terry turbine nozzles when inlet fluid is pure steam. The implementation of the models into RELAP-7 will be briefly discussed. In the Sandia model, the turbine bucket inlet velocity is provided according to a reduced-order model, which was obtained from a large number of CFD simulations. In this work, we propose an alternative method, using an under-expanded jet model to obtain the velocity and thermodynamic conditions for the turbine bucket inlet. The models include both adiabatic expansion process inside the nozzle and free expansion process out of the nozzle to reach the ambient pressure. The combined models are able to predict the steam mass flow rate and supersonic velocity to the Terry turbine bucket entrance, which are the necessary input conditions for the Terry Turbine rotor model. The nozzle analytical models were validated with experimental data and
McLerran, Larry; Skokov, Vladimir V.
2017-01-01
We modify the McLerran-Venugopalan model to include only a finite number of sources of color charge. In the effective action for such a system of a finite number of sources, there is a point-like interaction and a Coulombic interaction. The point interaction generates the standard fluctuation term in the McLerran-Venugopalan model. The Coulomb interaction generates the charge screening originating from well known evolution in x. Such a model may be useful for computing angular harmonics of flow measured in high energy hadron collisions for small systems. In this paper we provide a basic formulation of the problem on a lattice.
Lagi, Marco; Bertrand, Karla Z; Bar-Yam, Yaneer
2012-01-01
Increases in global food prices have led to widespread hunger and social unrest---and an imperative to understand their causes. In a previous paper published in September 2011, we constructed for the first time a dynamic model that quantitatively agreed with food prices. Specifically, the model fit the FAO Food Price Index time series from January 2004 to March 2011, inclusive. The results showed that the dominant causes of price increases during this period were investor speculation and ethanol conversion. The model included investor trend following as well as shifting between commodities, equities and bonds to take advantage of increased expected returns. Here, we extend the food prices model to January 2012, without modifying the model but simply continuing its dynamics. The agreement is still precise, validating both the descriptive and predictive abilities of the analysis. Policy actions are needed to avoid a third speculative bubble that would cause prices to rise above recent peaks by the end of 2012.
Demir, Eralp
2017-01-01
A new, simple and physically consistent dislocation-density-based continuum model is developed in a large-strain crystal plasticity framework. All the constitutive laws are expressed in a simple and unique way in terms of a single state variable dislocation density. The proposed physically based model predicts experimental single-crystal stress-strain curves along different crystal directions more accurately than a classical model with widely accepted constitutive laws. The polycrystal texture predictions from the dislocation-density-based and classical models having the same single-crystal stress-strain characteristics are in good agreement with the classical model when Taylor-type homogenization is used in conjunction with enough number of grains.
Generalized Functional Linear Models With Semiparametric Single-Index Interactions
Li, Yehua
2010-06-01
We introduce a new class of functional generalized linear models, where the response is a scalar and some of the covariates are functional. We assume that the response depends on multiple covariates, a finite number of latent features in the functional predictor, and interaction between the two. To achieve parsimony, the interaction between the multiple covariates and the functional predictor is modeled semiparametrically with a single-index structure. We propose a two step estimation procedure based on local estimating equations, and investigate two situations: (a) when the basis functions are pre-determined, e.g., Fourier or wavelet basis functions and the functional features of interest are known; and (b) when the basis functions are data driven, such as with functional principal components. Asymptotic properties are developed. Notably, we show that when the functional features are data driven, the parameter estimates have an increased asymptotic variance, due to the estimation error of the basis functions. Our methods are illustrated with a simulation study and applied to an empirical data set, where a previously unknown interaction is detected. Technical proofs of our theoretical results are provided in the online supplemental materials.
Directory of Open Access Journals (Sweden)
Wendi Liu
2015-01-01
Full Text Available The aim of the present study is to apply simple ODE models in the area of modeling the spread of emerging infectious diseases and show the importance of model selection in estimating parameters, the basic reproduction number, turning point, and final size. To quantify the plausibility of each model, given the data and the set of four models including Logistic, Gompertz, Rosenzweg, and Richards models, the Bayes factors are calculated and the precise estimates of the best fitted model parameters and key epidemic characteristics have been obtained. In particular, for Ebola the basic reproduction numbers are 1.3522 (95% CI (1.3506, 1.3537, 1.2101 (95% CI (1.2084, 1.2119, 3.0234 (95% CI (2.6063, 3.4881, and 1.9018 (95% CI (1.8565, 1.9478, the turning points are November 7,November 17, October 2, and November 3, 2014, and the final sizes until December 2015 are 25794 (95% CI (25630, 25958, 3916 (95% CI (3865, 3967, 9886 (95% CI (9740, 10031, and 12633 (95% CI (12515, 12750 for West Africa, Guinea, Liberia, and Sierra Leone, respectively. The main results confirm that model selection is crucial in evaluating and predicting the important quantities describing the emerging infectious diseases, and arbitrarily picking a model without any consideration of alternatives is problematic.
Directory of Open Access Journals (Sweden)
Moonen Marie
2011-09-01
Full Text Available Abstract Background Valve dysfunction is a common cardiovascular pathology. Despite significant clinical research, there is little formal study of how valve dysfunction affects overall circulatory dynamics. Validated models would offer the ability to better understand these dynamics and thus optimize diagnosis, as well as surgical and other interventions. Methods A cardiovascular and circulatory system (CVS model has already been validated in silico, and in several animal model studies. It accounts for valve dynamics using Heaviside functions to simulate a physiologically accurate "open on pressure, close on flow" law. However, it does not consider real-time valve opening dynamics and therefore does not fully capture valve dysfunction, particularly where the dysfunction involves partial closure. This research describes an updated version of this previous closed-loop CVS model that includes the progressive opening of the mitral valve, and is defined over the full cardiac cycle. Results Simulations of the cardiovascular system with healthy mitral valve are performed, and, the global hemodynamic behaviour is studied compared with previously validated results. The error between resulting pressure-volume (PV loops of already validated CVS model and the new CVS model that includes the progressive opening of the mitral valve is assessed and remains within typical measurement error and variability. Simulations of ischemic mitral insufficiency are also performed. Pressure-Volume loops, transmitral flow evolution and mitral valve aperture area evolution follow reported measurements in shape, amplitude and trends. Conclusions The resulting cardiovascular system model including mitral valve dynamics provides a foundation for clinical validation and the study of valvular dysfunction in vivo. The overall models and results could readily be generalised to other cardiac valves.
Tsuda, S; Matsusaka, N; Madarame, H; Miyamae, Y; Ishida, K; Satoh, M; Sekihashi, K; Sasaki, Y F
2000-04-13
The genotoxicity of 22 mono-functional alkylating agents (including 9 dialkyl N-nitrosoamines) and 10 DNA crosslinkers selected from IARC (International Agency for Research on Cancer) groups 1, 2A, and 2B was evaluated in eight mouse organs with the alkaline single cell gel electrophoresis (SCGE) (comet) assay. Groups of four mice were treated once intraperitoneally at the dose at which micronucleus tests had been conducted, and the stomach, colon, liver, kidney, bladder, lung, brain, and bone marrow were sampled 3, 8, and/or 24 h later. All chemicals were positive in the SCGE assay in at least one organ. Of the 22 mono-functional alkylating agents, over 50% were positive in all organs except the brain and bone marrow. The two subsets of mono-functional alkylating agents differed in their bone marrow genotoxicity: only 1 of the 9 dialkyl N-nitrosoamines was positive in bone marrow as opposed to 8 of the 13 other alkylating agents, reflecting the fact that dialkyl N-nitrosoamines are poor micronucleus inducers in hematopoietic cells. The two groups of mono-functional alkylating agents also differ in hepatic carcinogenicity in spite of the fact that they are similar in hepatic genotoxicity. While dialkyl N-nitrosoamines produce tumors primarily in mouse liver, only one (styrene-7,8-oxide) out of 10 of the other type of mono-functional alkylating agents is a mouse hepatic carcinogen. Taking into consideration our previous results showing high concordance between hepatic genotoxicity and carcinogenicity for aromatic amines and azo compounds, a possible explanation for the discrepancy might be that chemicals that require metabolic activation show high concordance between genotoxicity and carcinogenicity in the liver. A high percent of the 10 DNA crosslinkers were positive in the SCGE assay in the gastrointestinal mucosa, but less than 50% were positive in the liver and lung. In this study, we allowed 10 min alkali-unwinding to obtain low and stable control values
Cich, Matthew J.; Guillaume, Alexandre; Drouin, Brian; Benner, D. Chris
2017-06-01
Multispectrum analysis can be a challenge for a variety of reasons. It can be computationally intensive to fit a proper line shape model especially for high resolution experimental data. Band-wide analyses including many transitions along with interactions, across many pressures and temperatures are essential to accurately model, for example, atmospherically relevant systems. Labfit is a fast multispectrum analysis program originally developed by D. Chris Benner with a text-based interface. More recently at JPL a graphical user interface was developed with the goal of increasing the ease of use but also the number of potential users. The HTP lineshape model has been added to Labfit keeping it up-to-date with community standards. Recent analyses using labfit will be shown to demonstrate its ability to competently handle large experimental datasets, including high order lineshape effects, that are otherwise unmanageable.
Anderson, Benjamin
2013-01-01
All observations of photodegradation and self healing follow the predictions of the correlated chromophore domain model. [Ramini et.al. Polym. Chem., 2013, 4, 4948.] In the present work, we generalize the domain model to describe the effects of an electric field by including induced dipole interactions between molecules in a domain by means of a self-consistent field approach. This electric field correction is added to the statistical mechanical model to calculate the distribution of domains that are central to healing. Also included in the model are the dynamics due to the formation of an irreversibly damaged species. As in previous studies, the model with a one-dimensional domain best explains all experimental data of the population as a function of time, temperature, intensity, concentration, and now applied electric field. Though the nature of a domain is yet to be determined, the fact that only one-dimensional domain models are consistent with observations suggests that they might be made of correlated d...
Reerink, Thomas J.; van de Berg, Willem Jan; van de Wal, Roderik S. W.
2016-11-01
This paper accompanies the second OBLIMAP open-source release. The package is developed to map climate fields between a general circulation model (GCM) and an ice sheet model (ISM) in both directions by using optimal aligned oblique projections, which minimize distortions. The curvature of the surfaces of the GCM and ISM grid differ, both grids may be irregularly spaced and the ratio of the grids is allowed to differ largely. OBLIMAP's stand-alone version is able to map data sets that differ in various aspects on the same ISM grid. Each grid may either coincide with the surface of a sphere, an ellipsoid or a flat plane, while the grid types might differ. Re-projection of, for example, ISM data sets is also facilitated. This is demonstrated by relevant applications concerning the major ice caps. As the stand-alone version also applies to the reverse mapping direction, it can be used as an offline coupler. Furthermore, OBLIMAP 2.0 is an embeddable GCM-ISM coupler, suited for high-frequency online coupled experiments. A new fast scan method is presented for structured grids as an alternative for the former time-consuming grid search strategy, realising a performance gain of several orders of magnitude and enabling the mapping of high-resolution data sets with a much larger number of grid nodes. Further, a highly flexible masked mapping option is added. The limitation of the fast scan method with respect to unstructured and adaptive grids is discussed together with a possible future parallel Message Passing Interface (MPI) implementation.
Descriptive models for single-jet sluicing of sludge waste
Energy Technology Data Exchange (ETDEWEB)
Erian, F.F.; Mahoney, L.A.; Terrones, G.
1997-12-01
Mobilization of sludge waste stored in underground storage tanks can be achieved safely and reliably by sluicing. In the project discussed in this report, the waste in Hanford single-shell Tank 241-C-106 will be mobilized by sluicing, retrieved by a slurry retrieval pump, and transferred via an 1800-ft slurry pipeline to Tank 241-AY-102. A sluicing strategy must be developed that ensures efficient use of the deployed configuration of the sluicing system: the nozzle(s) and the retrieval pump(s). Given a sluicing system configuration in a particular tank, it is desirable to prescribe the sequential locations at which the sludge will be mobilized and retrieved and the rate at which these mobilization and retrieval processes take place. In addition, it is necessary to know whether the retrieved waste slurry meets the requirements for cross-site slurry transport. Some of the physical phenomena that take place during mobilization and retrieval and certain aspects of the sluicing process are described in this report. First, a mathematical model gives (1) an idealized geometrical representation of where, within the confines of a storage tank containing a certain amount of settled waste, sludge can be removed and mobilized; and (2) a quantitative measure of the amount of sludge that can be removed during a sluicing campaign. A model describing an idealized water jet issuing from a circular nozzle located at a given height above a flat surface is also presented in this report. This dynamic water-jet model provides the basis for improving the geometrical sluicing model presented next. In this model the authors assume that the water jet follows a straight trajectory toward a target point on a flat surface. However, the water jet does not follow a straight line in the actual tank, and using the true trajectory will allow a more accurate estimate of the amount of disturbed material. Also, the authors hope that developing accurate force and pressure fields will lead to a better
Kinetic exchange opinion model: solution in the single parameter map limit
Chowdhury, Krishanu Roy; Biswas, Soumyajyoti; Chakrabarti, Bikas K
2011-01-01
We study a recently proposed kinetic exchange opinion model (Lallouache et. al., Phys. Rev E 82, 056112 (2010)) in the limit of a single parameter map. Although it does not include the essentially complex behavior of the multiagent version, it provides us with the insight regarding the choice of order parameter for the system as well as some of its other dynamical properties. We also study the generalized two-parameter version of the model, and provide the exact phase diagram. The universal behavior along this phase boundary in terms of the suitably defined order parameter is seen.
Model of multistep electron transfer in a single-mode polar medium
Feskov, S. V.; Yudanov, V. V.
2017-09-01
A mathematical model of multistep photoinduced electron transfer (PET) in a polar medium with a single relaxation time (Debye solvent) is developed. The model includes the polarization nonequilibrity formed in the vicinity of the donor-acceptor molecular system at the initial steps of photoreaction and its influence on the subsequent steps of PET. It is established that the results from numerical simulation of transient luminescence spectra of photoexcited donor-acceptor complexes (DAC) conform to calculated data obtained on the basis of the familiar experimental technique used to measure the relaxation function of solvent polarization in the vicinity of DAC in the picosecond and subpicosecond ranges.
Equivalence of two models in single-phase multicomponent flow simulations
Wu, Yuanqing
2016-02-28
In this work, two models to simulate the single-phase multicomponent flow in reservoirs are introduced: single-phase multicomponent flow model and two-phase compositional flow model. Because the single-phase multicomponent flow is a special case of the two-phase compositional flow, the two-phase compositional flow model can also simulate the case. We compare and analyze the two models when simulating the single-phase multicomponent flow, and then demonstrate the equivalence of the two models mathematically. An experiment is also carried out to verify the equivalence of the two models.
A Physics-Based Charge-Control Model for InP DHBT Including Current-Blocking Effect
Institute of Scientific and Technical Information of China (English)
GE Ji; JIN Zhi; SU Yong-Bo; CHENG Wei; WANG Xian-Wai; CHEN Gao-Peng; LIU Xin-Yu
2009-01-01
We develop a physics-based charge-control InP double heterojunction bipolar transistor model including three important effects: current blocking, mobile-charge modulation of the base-collector capacitance and velocity-field modulation in the transit time. The bias-dependent base-collector depletion charge is obtained analytically, which takes into account the mobile-charge modulation. Then, a measurement based voltage-dependent transit time formulation is implemented. As a result, over a wide range of biases, the developed model shows good agreement between the modeled and measured S-parameters and cutoff frequency. Also, the model considering current blocking effect demonstrates more accurate prediction of the output characteristics than conventional vertical bipolar inter company results.
Liu, J.; Zhu, W. D.; Charalambides, P. G.; Shao, Y. M.; Xu, Y. F.; Fang, X. M.
2016-11-01
As one of major failure modes of mechanical structures subjected to periodic loads, embedded cracks due to fatigue can cause catastrophic failure of machineries. Understanding the dynamic characteristics of a structure with an embedded crack is helpful for early crack detection and diagnosis. In this work, a new three-segment beam model with local flexibilities at crack tips is developed to investigate the vibration of a cantilever beam with a closed, fully embedded horizontal crack, which is assumed to be not located at its clamped or free end or distributed near its top or bottom side. The three-segment beam model is assumed to be a linear elastic system, and it does not account for the nonlinear crack closure effect; the top and bottom segments always stay in contact at their interface during the beam vibration. It can model the effects of local deformations in the vicinity of the crack tips, which cannot be captured by previous methods in the literature. The middle segment of the beam containing the crack is modeled by a mechanically consistent, reduced bending moment. Each beam segment is assumed to be an Euler-Bernoulli beam, and the compliances at the crack tips are analytically determined using a J-integral approach and verified using commercial finite element software. Using compatibility conditions at the crack tips and the transfer matrix method, the nature frequencies and mode shapes of the cracked cantilever beam are obtained. The three-segment beam model is used to investigate the effects of local flexibilities at crack tips on the first three natural frequencies and mode shapes of the cracked cantilever beam. A stationary wavelet transform (SWT) method is used to process the mode shapes of the cracked cantilever beam; jumps in single-level SWT decomposition detail coefficients can be used to identify the length and location of an embedded horizontal crack.
Pyrolysis Model of Single Biomass Pellet in Downdraft Gasifier
Institute of Scientific and Technical Information of China (English)
薛爱军; 潘继红; 田茂诚; 伊晓璐
2016-01-01
By coupling the heat transfer equation with semi-global chemical reaction kinetic equations, a one-dimensional, unsteady mathematical model is developed to describe the pyrolysis of single biomass pellet in the pyrolysis zone of downdraft gasifier. The simulation results in inert atmosphere and pyrolysis zone agree well with the published experimental results. The pyrolysis of biomass pellets in pyrolysis zone is investigated, and the results show that the estimated convective heat transfer coefficient and emissivity coefficient are suitable. The mean pyro-lysis time is 15.22%, shorter than that in inert atmosphere, and the pellet pyrolysis process in pyrolysis zone belongs to fast pyrolysis. Among the pyrolysis products, tar yield is the most, gas the second, and char the least. During pyrolysis, the temperature change near the center is contrary to that near the surface. Pyrolysis gradually moves inwards layer by layer. With the increase of pyrolysis temperature and pellet diameter, the total pyrolysis time, tar yield, char yield and gas yield change in different ways. The height of pyrolysis zone is calculated to be 1.51—3.51 times of the characteristic pellet diameter.
Klinkusch, Stefan; Saalfrank, Peter; Klamroth, Tillmann
2009-09-21
We report simulations of laser-pulse driven many-electron dynamics by means of a simple, heuristic extension of the time-dependent configuration interaction singles (TD-CIS) approach. The extension allows for the treatment of ionizing states as nonstationary states with a finite, energy-dependent lifetime to account for above-threshold ionization losses in laser-driven many-electron dynamics. The extended TD-CIS method is applied to the following specific examples: (i) state-to-state transitions in the LiCN molecule which correspond to intramolecular charge transfer, (ii) creation of electronic wave packets in LiCN including wave packet analysis by pump-probe spectroscopy, and, finally, (iii) the effect of ionization on the dynamic polarizability of H(2) when calculated nonperturbatively by TD-CIS.
Modeling Longitudinal Data with Generalized Additive Models: Applications to Single-Case Designs
Sullivan, Kristynn J.; Shadish, William R.
2013-01-01
Single case designs (SCDs) are short time series that assess intervention effects by measuring units repeatedly over time both in the presence and absence of treatment. For a variety of reasons, interest in the statistical analysis and meta-analysis of these designs has been growing in recent years. This paper proposes modeling SCD data with…
Kharin, Stanislav; Sarsengeldin, Merey; Kassabek, Samat
2016-08-01
We represent mathematical models of electromagnetic field dynamics and heat transfer in closed symmetric and asymmetric electrical contacts including Thomson effect, which are essentially nonlinear due to the dependence of thermal and electrical conductivities on temperature. Suggested solutions are based on the assumption of identity of equipotentials and isothermal surfaces, which agrees with experimental data and valid for both linear and nonlinear cases. Well known Kohlrausch temperature-potential relation is analytically justified.
Svendsen, B.; Hutter, K.; Laloui, L.
This work deals with the thermodynamic formulation of constitutive models for materials whose quasi-static behaviour is governed by internal friction, e.g., dry granular materials. The process of internal friction is represented here phenomenologically with the help of a second-order, symmetric-tensor-valued internal variable. A general class of models for the evolution of this variable is considered, including as special cases a hypoelastic-like form for this relation as well as the hypoplastic form of Kolymbas (1991). The thermodynamic formulation is carried out in the context of the Müller-Liu entropy principle. Among other things, it is shown that for the hypoelastic-type models, a true equilibrium inelastic Cauchy stress exists. On the other hand, such a stress does not exist for the hypoplastic model due to its rate-independence and incremental non-linearity. With the help of a slight generalization of the notion of thermodynamic equilibrium, i.e., to thermodynamic ``quasi-equilibrium,'' however, such a Cauchy stress can be formulated for the hypoplastic model. As it turns out, this quasi-equilibrium for the Cauchy stress represents a thermodynamic generalization of the so-called quasi-static stress postulated for example by Goddard (1986) in the context of his viscoplastic model for a frictional-dissipative, and in particular for granular, materials.
Caruana, Emmanuel; Chevret, Sylvie; Resche-Rigon, Matthieu; Pirracchio, Romain
2015-12-01
The propensity score (PS) is a balancing score. Following PS matching, balance checking usually relies on estimating separately the standardized absolute mean difference for each baseline characteristic. The average standardized absolute mean difference and the Mahalanobis distances have been proposed to summarize the information across the covariates. However, they might be minimized when nondesirable variables such as instrumental variables (IV) are included in the PS model. We propose a new weighted summary balance measure that takes into account, for each covariate, its strength of association with the outcome. This new measure was evaluated using a simulation study to assess whether minimization of the measure coincided with minimally biased estimates. All measures were then applied to a real data set from an observational cohort study. Contrarily to the other measures, our proposal was minimized when including the confounders, which coincided with minimal bias and mean squared error, but increased when including an IV in the PS model. Similar findings were observed in the real data set. A balance measure taking into account the strength of association between the covariates and the outcome may be helpful to identify the most parsimonious PS model. Copyright © 2015 Elsevier Inc. All rights reserved.
A Mathematical Model of the Single Aluminium Diboride Particle Ignition
Directory of Open Access Journals (Sweden)
D. A. Yagodnikov
2014-01-01
Full Text Available The paper presents a developed mathematical model of ignition of the single aluminum diboride particle as an aluminum-boron alloy in the oxidizing environment of a complicated chemical composition containing oxygen, water vapor, and carbon dioxide. The mathematical model is based on the theory of parallel chemical reactions proceeding on the appropriate parts of the particle surface occupied by each element in proportion to their molar share in the alloy. The paper considers a possibility to establish a thermodynamic balance between components over a particle surface in the gas phase. The composition of components is chosen as a result of thermodynamic calculation, namely В g , B2O3 g , BO, B2O2, BO2, Alg , AlO, Al2O, N2. The mathematical model is formed by a system of the differential equations of enthalpy balance, mass of aluminum diboride particle, and of formed oxides, which become isolated by initial and boundary conditions for temperature and size of particles, concentration of an oxidizer, and temperature of gas. The software package “AlB2“ is developed. It is a complete independent module written in Fortran algorithmic language, which together with a package of the subroutines “SPARKS” is used to calculate parameters of burning aluminum diboride particle by the Runge-Kutt method.For stoichiometry of chemical reactions of interaction between aluminum diboride and oxygen, a dynamics of changing temperature of a particle and thickness of an oxide film on its surface is calculated. It was admitted as initial conditions that the aluminum diboride particle radius was 100μ and the reference temperature of environment was 500 K, 1000 K, 2300 K, and 3000 K. Depending on this temperature the aluminum diboride particle temperature was calculated. Changing thickness of the oxide film on the particle surface at various initial gas temperatures characterizes its increase at the initial heating period of ~ 0,01 s and a gradual slowdown of the
Institute of Scientific and Technical Information of China (English)
吴建松; 张辉; 杨锐
2013-01-01
This paper applies the meshfree Smoothed Particle Hydrodynamics (SPH) method with Graphical Processing Unit (GPU) parallel computing technique to investigate the highly complex 3-D dam-break flow in urban areas including underground spaces. Taking the advantage of GPUs parallel computing techniques, simulations involving more than 107 particles can be achieved. We use a virtual geometric plane boundary to handle the outermost solid wall in order to save considerable video card memory for the GPU computing. To evaluate the accuracy of the new GPU-based SPH model, qualitative and quantitative comparison to a real flooding experiment is performed and the results of a numerical model based on Shallow Water Equations (SWEs) is given with good accu- racy. With the new GPU-based SPH model, the effects of the building layouts and underground spaces on the propagation of dam- break flood through an intricate city layout are examined.
Sakowski, Barbara; Edwards, Daryl; Dickens, Kevin
2014-01-01
Modeling droplet condensation via CFD codes can be very tedious, time consuming, and inaccurate. CFD codes may be tedious and time consuming in terms of using Lagrangian particle tracking approaches or particle sizing bins. Also since many codes ignore conduction through the droplet and or the degradating effect of heat and mass transfer if noncondensible species are present, the solutions may be inaccurate. The modeling of a condensing spray chamber where the significant size of the water droplets and the time and distance these droplets take to fall, can make the effect of droplet conduction a physical factor that needs to be considered in the model. Furthermore the presence of even a relatively small amount of noncondensible has been shown to reduce the amount of condensation [Ref 1]. It is desirable then to create a modeling tool that addresses these issues. The path taken to create such a tool is illustrated. The application of this tool and subsequent results are based on the spray chamber in the Spacecraft Propulsion Research Facility (B2) located at NASA's Plum Brook Station that tested an RL-10 engine. The platform upon which the condensation physics is modeled is SINDAFLUINT. The use of SINDAFLUINT enables the ability to model various aspects of the entire testing facility, including the rocket exhaust duct flow and heat transfer to the exhaust duct wall. The ejector pumping system of the spray chamber is also easily implemented via SINDAFLUINT. The goal is to create a transient one dimensional flow and heat transfer model beginning at the rocket, continuing through the condensing spray chamber, and finally ending with the ejector pumping system. However the model of the condensing spray chamber may be run independently of the rocket and ejector systems detail, with only appropriate mass flow boundary conditions placed at the entrance and exit of the condensing spray chamber model. The model of the condensing spray chamber takes into account droplet
Modeling of Crystal Orientations in Laser Powder Deposition of Single Crystal Material
Qi, Huan; Liu, Zhaoyang
This paper presents a numerical model which simulates the dynamic molten pool formation and the crystal orientations of solidified SX alloy in a multi-layer laser powder deposition process. Based on the mathematical model of coaxial laser direct deposition, the effect of parameters (laser power, scanning speed, powder feed rate) on the tendency to form [001] direction expitaxial grains during solidification was evaluated. In the transient three- dimensional model, physical phenomena including heat transfer, melting, grain formation during solidification, mass addition, and fluid flow in the melt pool, were modeled in a self-consistent manner. The temperature fields, fluid flow velocity, clad geometry (width, height and melt pool depth) and grain formation in melting pool of single layer are predicted.
Cooper, B. P., Jr.
1979-01-01
A model for the boundary layer at the exit plane of a rocket nozzle was developed which, unlike most previous models, includes the subsonic sublayer. The equations for the flow near the nozzle exit plane are presented and the method by which the subsonic sublayer transitions to supersonic flow in the plume is described. The resulting model describes the entire boundary layer and can be used to provide a startline for method-of-characteristics calculations of plume flowfields. The model was incorporated into a method of characteristics computer program and comparisons of computed results to experimental data show good agreement. The data used in the comparisons were obtained in tests in which mass fluxes from a 22.2-N (5 lbf) thrust engine were measured at angles off the nozzle centerline of up to 150 deg. Additional comparisons were made with data obtained during tests of a 0.89-N (0.2 lbr) monopropellant thruster and from the OH-64 space shuttle heating tests. The agreement with the data indicates that the model can be used for calculating plume backflow properties.
MODELLING OF SINGLE PHASE UPFC WITHOUT DC CAPACITOR
Directory of Open Access Journals (Sweden)
Dr. Arvind Kumar Singh,
2011-05-01
Full Text Available The main focus of this paper is Flexible AC Transmission System (FACTS device known as the Unified Power Flow Controller (UPFC. We know that Unified Power Flow Controller (UPFC has uniquecapability to control simultaneously real and reactive power flows on a transmission line as well as to regulate voltage at the bus where it is connected, this class of Flexible AC Transmission System (FACTS device creates a tremendous quality impact on power system stability. These features become even more significant knowingthat the UPFC can allow loading of the transmission lines close to their thermal limits, forcing the power to flow through the desired paths. This will give the power system operators much needed flexibility in order to satisfy the demands that the deregulated power system will impose. The most cost-effective way to estimate the effect the Unified Power Flow Controller (UPFC has on a specific power system operation is to simulate that system together with the UPFC by using one of the existing simulations packages. Specifically, the objective of this paper is to develop a single phase Unified Power Flow Controller (UPFC model that can be incorporated into existing MATLAB. As it is known that UPFC has two parts one is in shunt and other is in series with the transmission line, but in conventional UPFC these two parts are connected and designed to install in one corner of power grid. An attempt, in this paper had made to separate or extend the series part and shunt part of UnifiedPower Flow Controller (UPFC. This gives the possibility to installed series and shunt part of UPFC at different required locations. Finally the responses of two modified DC link UPFC is compared.
Tullius, Stefan G; Pomahac, Bohdan; Kim, Heung Bae; Carty, Matthew J; Talbot, Simon G; Nelson, Helen M; Delmonico, Francis L
2016-10-01
We report on the to date largest recovery of 11 organs from a single deceased donor with the transplantation of face, bilateral upper extremities, heart, 1 lung, liver (split for 2 recipients), kidneys, pancreas, and intestine. Although logistically challenging, this case demonstrates the feasibility and safety of the recovery of multiple thoracic and abdominal organs with multiple vascular composite allotransplants and tissues. Our experience of 8 additional successful multiple vascular composite allotransplants, thoracic, and abdominal organ recoveries suggests that such procedures are readily accomplishable from the same deceased donor.
Konuma, Noriyoshi; Wakabayashi, Kumiko; Matsumoto, Taro; Kusumi, Yoshiaki; Masuko, Takayuki; Iribe, Yuji; Mitsumata, Masako; Okano, Hideyuki; Kusafuka, Takeshi; Mugishima, Hideo
2009-01-01
Embryonic stem (ES) cells have been proposed as candidates for cell replacement therapy in patients with intestinal failure because these cells can be expanded indefinitely without losing their pluripotent phenotype. We investigated the differentiation capacity of mouse ES cells into gut-like structures, including intestinal stem cells, and defined culture conditions for efficient induction of formation of these structures. ES cell-derived gut-like structures (ES-guts) were reproducibly induced in developing embryoid bodies (EBs) by day 21 of differentiation culture. ES-guts contained an endodermal epithelium, a smooth muscle layer, interstitial cells of Cajal, and enteric neurons and showed spontaneous contraction. Transplantation of ES-guts under the kidney capsules of immunodeficient mice induced formation of highly differentiated epithelium composed of absorptive cells and goblet cells in the grafts. Immunoreactivity for Musashi-1 (Msi-1), a marker of intestinal stem cells, was detected in 1.9% of the columnar epithelial cells in the graft. Culture with 0.1% dimethyl sulfoxide increased the numbers of ES-guts in EBs, and serum-replacement (SR) culture, in comparison to standard ES culture containing 15% serum, increased the area ratio of ES-guts to EBs. SR culture also promoted maturation of epithelium to form a single layer of columnar epithelial cells, including absorptive cells and goblet cells. Expression of Msi-1 mRNA and protein was significantly enhanced when EBs were cultured under SR conditions. In conclusion, SR conditions efficiently induce formation of ES-guts and promote differentiation of epithelium, including intestinal stem cells. These results suggest the feasibility of cell-based therapy for intestinal failure based on ES cell culture systems.
Time dependence of Fe/O ratio within a 3D Solar Energetic Particle propagation model including drift
Dalla, S; Zelina, P; Laitinen, T
2016-01-01
Context. The intensity profiles of iron and oxygen in Solar Energetic Particle (SEP) events often display differences that result in a decreasing Fe/O ratio over time. The physical mechanisms behind this behaviour are not fully understood, but these observational signatures provide important tests of physical modelling efforts. Aims. In this paper we study the propagation of iron and oxygen SEP ions using a 3D model of propagation which includes the effect of guiding centre drift in a Parker spiral magnetic field. We derive time intensity profiles for a variety of observer locations and study the temporal evolution of the Fe/O ratio. Methods. We use a 3D full orbit test particle model which includes scattering. The configuration of the interplanetary magnetic field is a unipolar Parker spiral. Particles are released instantaneously from a compact region at 2 solar radii and allowed to propagate in 3D. Results. Both Fe and O experience significant transport across the magnetic field due to gradient and curvatu...
Directory of Open Access Journals (Sweden)
Cong Guan
2015-06-01
Full Text Available In this article, the operation of a large two-stroke marine diesel engine including various cases with turbocharger cut-out was thoroughly investigated by using a modular zero-dimensional engine model built in MATLAB/Simulink environment. The model was developed by using as a basis an in-house modular mean value engine model, in which the existing cylinder block was replaced by a more detailed one that is capable of representing the scavenging ports-cylinder-exhaust valve processes. Simulation of the engine operation at steady state conditions was performed and the derived engine performance parameters were compared with the respective values obtained by the engine shop trials. The investigation of engine operation under turbocharger cut-out conditions in the region from 10% to 50% load was carried out and the influence of turbocharger cut-out on engine performance including the in-cylinder parameters was comprehensively studied. The recommended schedule for the combination of the turbocharger cut-out and blower activation was discussed for the engine operation under part load conditions. Finally, the influence of engine operating strategies on the annual fuel savings, CO2 emissions reduction and blower operating hours for a Panamax container ship operating at slow steaming conditions is presented and discussed.
Modeling of single tube Fischer-Tropsch reactor for model biosyngas
Energy Technology Data Exchange (ETDEWEB)
Rafiq, Muhammad Hamid; Hustad, Johan Einar
2010-07-01
Fischer-Tropsch Synthesis is an important chemical process for the production of liquid fuels. The present study addresses the modeling of low temperature single tube Fischer- Tropsch reactor for a model biosyngas (33%H2, 17%CO and 50%N2). Cobalt based catalyst is used for synthesis due to its high activity and selectivity for linear hydrocarbons and lower price compared with other noble metals. The chemistry taking place in a FT reactor is complex but can be simplified by the following reaction (see original paper). For cobalt catalyst methanation reaction and shift reaction is neglected. Yates and Satterfield[1] determined the intrinsic rate constant of H2 consumption on a commercial cobalt catalyst. According to Steynberg et al.[2], the intrinsic activity of modern industrial cobalt catalyst is by a factor of three times higher then those reported by the above mentioned author. So, the equation of hydrogen consumption on a commercial cobalt catalyst is estimated (using the threefold value) and is given below: (see original paper). Modeling of Single tube fixed bed Fischer-Tropsch reactor is done with one or two dimensional pseudo homogeneous model. Among many thing the influence of cooling temperature effects are studied on the axial molar composition profiles, molar flow of reactant and product and reactant conversion. In addition effect of cooling temperature on the axial temperature profiles in a single tube Fischer-Tropsch reactor is also studied. (AG)
Wai, Rong-Jong; Yang, Zhi-Wei
2008-10-01
This paper focuses on the development of adaptive fuzzy neural network control (AFNNC), including indirect and direct frameworks for an n-link robot manipulator, to achieve high-precision position tracking. In general, it is difficult to adopt a model-based design to achieve this control objective due to the uncertainties in practical applications, such as friction forces, external disturbances, and parameter variations. In order to cope with this problem, an indirect AFNNC (IAFNNC) scheme and a direct AFNNC (DAFNNC) strategy are investigated without the requirement of prior system information. In these model-free control topologies, a continuous-time Takagi-Sugeno (T-S) dynamic fuzzy model with online learning ability is constructed to represent the system dynamics of an n-link robot manipulator. In the IAFNNC, an FNN estimator is designed to tune the nonlinear dynamic function vector in fuzzy local models, and then, the estimative vector is used to indirectly develop a stable IAFNNC law. In the DAFNNC, an FNN controller is directly designed to imitate a predetermined model-based stabilizing control law, and then, the stable control performance can be achieved by only using joint position information. All the IAFNNC and DAFNNC laws and the corresponding adaptive tuning algorithms for FNN weights are established in the sense of Lyapunov stability analyses to ensure the stable control performance. Numerical simulations and experimental results of a two-link robot manipulator actuated by dc servomotors are given to verify the effectiveness and robustness of the proposed methodologies. In addition, the superiority of the proposed control schemes is indicated in comparison with proportional-differential control, fuzzy-model-based control, T-S-type FNN control, and robust neural fuzzy network control systems.
Tournier, Jean-Michel; El-Genk, Mohamed S.
1995-01-01
This report describes the user's manual for 'HPTAM,' a two-dimensional Heat Pipe Transient Analysis Model. HPTAM is described in detail in the UNM-ISNPS-3-1995 report which accompanies the present manual. The model offers a menu that lists a number of working fluids and wall and wick materials from which the user can choose. HPTAM is capable of simulating the startup of heat pipes from either a fully-thawed or frozen condition of the working fluid in the wick structure. The manual includes instructions for installing and running HPTAM on either a UNIX, MS-DOS or VMS operating system. Samples for input and output files are also provided to help the user with the code.
Directory of Open Access Journals (Sweden)
Arturo Jiménez-Gutiérrez
2014-08-01
Full Text Available The synthesis of water networks based on properties has commonly ignored the effect of temperature on the property balances that are part of the formulation. When wide differences of temperatures are observed within the process, such an effect might yield significant errors in the application of conventional property balances. In this work, a framework for the development of water networks that include temperature effects on property balances is presented. The approach is based on the inclusion of constants in the property operators that are commonly used to carry out the property balances. An additional term to take care of composition effects is also included. The resulting approach is embedded into a formulation based on a mixed-integer nonlinear programming model for the design of water networks. A case study is presented that shows that the proposed approach yields an improvement in the prediction of the resulting properties for the integrated network, thus affecting the optimal solution.
Tournier, Jean-Michel; El-Genk, Mohamed S.
1995-01-01
A two-dimensional Heat Pipe Transient Analysis Model, 'HPTAM,' was developed to simulate the transient operation of fully-thawed heat pipes and the startup of heat pipes from a frozen state. The model incorporates: (a) sublimation and resolidification of working fluid; (b) melting and freezing of the working fluid in the porous wick; (c) evaporation of thawed working fluid and condensation as a thin liquid film on a frozen substrate; (d) free-molecule, transition, and continuum vapor flow regimes, using the Dusty Gas Model; (e) liquid flow and heat transfer in the porous wick; and (f) thermal and hydrodynamic couplings of phases at their respective interfaces. HPTAM predicts the radius of curvature of the liquid meniscus at the liquid-vapor interface and the radial location of the working fluid level (liquid or solid) in the wick. It also includes the transverse momentum jump condition (capillary relationship of Pascal) at the liquid-vapor interface and geometrically relates the radius of curvature of the liquid meniscus to the volume fraction of vapor in the wick. The present model predicts the capillary limit and partial liquid recess (dryout) in the evaporator wick, and incorporates a liquid pooling submodel, which simulates accumulation of the excess liquid in the vapor core at the condenser end.
Directory of Open Access Journals (Sweden)
Mortaza Jamshidian
2005-01-01
Full Text Available The problem of simultaneous inference and multiple comparison for comparing means of k( ≥ 3 populations has been long studied in the statistics literature and is widely available in statistics literature. However to-date, the problem of multiple comparison of regression models has not found its way to the software. It is only recently that the computational aspects of this problem have been resolved in a general setting. SimReg employs this new methodology and provides users with software for multiple regression of several regression models. The comparisons can be among any set of pairs, and moreover any number of predictors can be included in the model. More importantly predictors can be constrained to their natural boundaries, if known. Computational methods for the problem of simultaneous confidence bands when predictors are constrained to intervals has also recently been addressed. SimReg utilizes this recent development to offer simultaneous confidence bands for regression models with any number of predictor variables. Again, the predictors can be constrained to their natural boundaries which results in narrower bands, as compared to the case where no restriction is imposed. A by-product of these confidence bands is a new method for comparing two regression surfaces, that is more informative than the usual partial F test.
Chirinda, Ngonidzashe; Olesen, Jørgen E.; Heckrath, Goswin; Paradelo Pérez, Marcos; Taghizadeh-Toosi, Arezoo
2016-04-01
Globally, soil carbon (C) reserves are second only to those in the ocean, and accounts for a significant C reservoir. In the case of arable soils, the quantity of stored C is influenced by various factors (e.g. management practices). Currently, the topography related influences on in-field soil C dynamics remain largely unknown. However, topography is known to influence a multiplicity of factors that regulate C input, storage and redistribution. To understand the patterns and untangle the complexity of soil C dynamics in arable landscapes, our study was conducted with soils from shoulderslope and footslope positions on a 7.1 ha winter wheat field in western Denmark. We first collected soil samples from shoulderslope and footslope positions with various depth intervals down to 100 cm and analyzed them for physical and chemical properties including texture and soil organic C contents. In-situ carbon dioxide (CO2) concentrations were measured at different soil profile depths at both positions for a year. Soil moisture content and temperature at 5 and 40 cm depth was measured continuously. Additionally, surface soil CO2 fluxes at shoulderslope and footslope positions were measured. We then used measurement data collected from the two landscape positions to calibrate the one-dimensional mechanistic model SOILCO2 module of the HYDRUS-1D software package and obtained soil CO2 fluxes from soil profile at two landscape positions. Furthermore, we tested whether the inclusion of vertical and lateral soil C movement improved the modeling of C dynamics in cultivated landscapes. For that, soil profile CO2 fluxes were compared with those obtained using a simple process-based soil whole profile C model, C-TOOL, which was modified to include vertical and lateral movement of C on landscape. Our results highlight the need to consider vertical and lateral soil C movement in the modeling of C dynamics in cultivated landscapes, for better qualification of net carbon storage.
Mueller, Sabine C; Sommer, Björn; Backes, Christina; Haas, Jan; Meder, Benjamin; Meese, Eckart; Keller, Andreas
2016-01-22
Understanding the role of genetics in disease has become a central part of medical research. Non-synonymous single nucleotide variants (nsSNVs) in coding regions of human genes frequently lead to pathological phenotypes. Beyond single variations, the individual combination of nsSNVs may add to pathogenic processes. We developed a multiscale pipeline to systematically analyze the existence of quantitative effects of multiple nsSNVs and gene combinations in single individuals on pathogenicity. Based on this pipeline, we detected in a data set of 842 nsSNVs discovered in 76 genes related to cardiomyopathies, associated nsSNV combinations in seven genes present in at least 70% of all 639 patient samples, but not in a control cohort of healthy humans. Structural analyses of these revealed primarily an influence on the protein stability. For amino acid substitutions located at the protein surface, we generally observed a proximity to putative binding pockets. To computationally analyze cumulative effects and their impact, pathogenicity methods are currently being developed. Our approach supports this process, as shown on the example of a cardiac phenotype but can be likewise applied to other diseases such as cancer.
Hides, Leanne; Quinn, Catherine; Stoyanov, Stoyan; Cockshaw, Wendell; Mitchell, Tegan; Kavanagh, David J
2016-07-30
Internationally there is a growing interest in the mental wellbeing of young people. However, it is unclear whether mental wellbeing is best conceptualized as a general wellbeing factor or a multidimensional construct. This paper investigated whether mental wellbeing, measured by the Mental Health Continuum-Short Form (MHC-SF), is best represented by: (1) a single-factor general model; (2) a three-factor multidimensional model or (3) a combination of both (bifactor model). 2220 young Australians aged between 16 and 25 years completed an online survey including the MHC-SF and a range of other wellbeing and mental ill-health measures. Exploratory factor analysis supported a bifactor solution, comprised of a general wellbeing factor, and specific group factors of psychological, social and emotional wellbeing. Confirmatory factor analysis indicated that the bifactor model had a better fit than competing single and three-factor models. The MHC-SF total score was more strongly associated with other wellbeing and mental ill-health measures than the social, emotional or psychological subscale scores. Findings indicate that the mental wellbeing of young people is best conceptualized as an overarching latent construct (general wellbeing) to which emotional, social and psychological domains contribute. The MHC-SF total score is a valid and reliable measure of this general wellbeing factor.
Jiang, Hao; Panagiotopoulos, Athanassios Z.; Economou, Ioannis G.
2016-03-01
Statistical associating fluid theory (SAFT) is used to model CO2 solubilities in single and mixed electrolyte solutions. The proposed SAFT model implements an improved mean spherical approximation in the primitive model to represent the electrostatic interactions between ions, using a parameter K to correct the excess energies ("KMSA" for short). With the KMSA formalism, the proposed model is able to describe accurately mean ionic activity coefficients and liquid densities of electrolyte solutions including Na+, K+, Ca2+, Mg2+, Cl-, Br- and SO42- from 298.15 K to 473.15 K using mostly temperature independent parameters, with sole exception being the volume of anions. CO2 is modeled as a non-associating molecule, and temperature-dependent CO2-H2O and CO2-ion cross interactions are used to obtain CO2 solubilities in H2O and in single ion electrolyte solutions. Without any additional fitting parameters, CO2 solubilities in mixed electrolyte solutions and synthetic brines are predicted, in good agreement with experimental measurements.
Single-Nucleotide Mutation Matrix: A New Model for Predicting the NF-κB DNA Binding Sites
Wenxin Du; Jing Gao; Tingting Wang; Jinke Wang
2014-01-01
In this study, we established a single nucleotide mutation matrix (SNMM) model based on the relative binding affinities of NF-κB p50 homodimer to a wild-type binding site (GGGACTTTCC) and its all single-nucleotide mutants detected with the double-stranded DNA microarray. We evaluated this model by scoring different groups of 10-bp DNA sequences with this model and analyzing the correlations between the scores and the relative binding affinities detected with three wet experiments, including t...
Atomistic modeling of different loading paths in single crystal copper and aluminum
Directory of Open Access Journals (Sweden)
R. Pezer
2016-10-01
Full Text Available Utilizing molecular dynamics (MD integration model we have investigated some of the relevant physical processes caused by different loading paths at the atomic level in Cu and Al monocrystal specimen. Interactions among the atoms in the bulk are modeled with the standard realistic Embedded Atom Method (EAM potentials. MD simulation gives us the detailed information about non-equilibrium dynamics including crystal structure defects, vacancies and dislocations. In particular, we have obtained result that indicate increase in the total energy of the crystal during loading (especially cyclic that provides us direct quantitative evidence of the metal weakening. For the basic response, we have deformed copper and aluminum single crystal according to the simple loading path and a series of multiaxial loading-paths including cyclic repetition. We compute equivalent stress-strain diagrams as well as dislocation total length vs time graphs to describe signatures of the anisotropic response of the crystal
Ferrer, Javier; Pérez-Martín, Miguel A; Jiménez, Sara; Estrela, Teodoro; Andreu, Joaquín
2012-12-01
This paper describes two different GIS models - one stationary (GeoImpress) and the other non-stationary (Patrical) - that assess water quantity and quality in the Júcar River Basin District, a large river basin district (43,000km(2)) located in Spain. It aims to analyze the status of surface water (SW) and groundwater (GW) bodies in relation to the European Water Framework Directive (WFD) and to support measures to achieve the WFD objectives. The non-stationary model is used for quantitative analysis of water resources, including long-term water resource assessment; estimation of available GW resources; and evaluation of climate change impact on water resources. The main results obtained are the following: recent water resources have been reduced by approximately 18% compared to the reference period 1961-1990; the GW environmental volume required to accomplish the WFD objectives is approximately 30% of the GW annual resources; and the climate change impact on water resources for the short-term (2010-2040), based on a dynamic downscaling A1B scenario, implies a reduction in water resources by approximately 19% compared to 1990-2000 and a reduction of approximately 40-50% for the long-term (2070-2100), based on dynamic downscaling A2 and B2 scenarios. The model also assesses the impact of various fertilizer application scenarios on the status of future GW quality (nitrate) and if these future statuses will meet the WFD requirements. The stationary model generates data on the actual and future chemical status of SW bodies in the river basin according to the modeled scenarios and reflects the implementation of different types of measures to accomplish the Urban Waste Water Treatment Directive and the WFD. Finally, the selection and prioritization of additional measures to accomplish the WFD are based on cost-effectiveness analysis.
Modelling and Analysis of Single Diode Photovoltaic Module using MATLAB/Simulink
Directory of Open Access Journals (Sweden)
Amit Anand1
2016-03-01
Full Text Available The growing concern over environmental degradation resulting from combustion of fossil fuels and depleting fossil fuel reserves has raised awareness about alternative energy options. Renewable energy system is perfect solution of this problem. This paper presents a mathematical model of single diode solar photovoltaic (SPV module. SPV cell generates electricity when exposed to sunlight but this generation depends on whether condition like temperature and irradiance, for better accuracy all the parameters are considered including shunt, series resistance and simulated in MATLAB/Simulink. The output is analyzed by varying the temperature and irradiance and effect of change in shunt and series resistance is also observed.
A Complex Overview of Modeling and Control of the Rotary Single Inverted Pendulum System
Directory of Open Access Journals (Sweden)
Slavka Jadlovska
2013-01-01
Full Text Available The purpose of this paper is to present an in-depth survey of the rotary single inverted pendulum system from a control engineer's point of view. The scope of the survey includes modeling and open-loop analysis of the system as well as design and verification of balancing and swing up controllers which ensure successful stabilization of the pendulum in the unstable upright equilibrium. All relevant tasks and simulation experiments are conducted using the appropriate function blocks, GUI applications and demonstration schemes from a Simulink block library developed by the authors of the paper. The library is called Inverted Pendula Modeling and Control (IPMaC and offers comprehensive program support for modeling, simulation and control of classical (linear and rotary inverted pendulum systems.