Speed Estimation in Geared Wind Turbines Using the Maximum Correlation Coefficient
DEFF Research Database (Denmark)
Skrimpas, Georgios Alexandros; Marhadi, Kun S.; Jensen, Bogi Bech
2015-01-01
to overcome the above mentioned issues. The high speed stage shaft angular velocity is calculated based on the maximum correlation coefficient between the 1 st gear mesh frequency of the last gearbox stage and a pure sinus tone of known frequency and phase. The proposed algorithm utilizes vibration signals...
Rocco, Paolo; Cilurzo, Francesco; Minghetti, Paola; Vistoli, Giulio; Pedretti, Alessandro
2017-10-01
The data presented in this article are related to the article titled "Molecular Dynamics as a tool for in silico screening of skin permeability" (Rocco et al., 2017) [1]. Knowledge of the confidence interval and maximum theoretical value of the correlation coefficient r can prove useful to estimate the reliability of developed predictive models, in particular when there is great variability in compiled experimental datasets. In this Data in Brief article, data from purposely designed numerical simulations are presented to show how much the maximum r value is worsened by increasing the data uncertainty. The corresponding confidence interval of r is determined by using the Fisher r → Z transform.
Usuda, Katsuo; Funasaki, Aika; Sekimura, Atsushi; Motono, Nozomu; Matoba, Munetaka; Doai, Mariko; Yamada, Sohsuke; Ueda, Yoshimichi; Uramoto, Hidetaka
2018-04-09
Diffusion-weighted magnetic resonance imaging (DWI) is useful for detecting malignant tumors and the assessment of lymph nodes, as FDG-PET/CT is. But it is not clear how DWI influences the prognosis of lung cancer patients. The focus of this study is to evaluate the correlations between maximum standardized uptake value (SUVmax) of FDG-PET/CT and apparent diffusion coefficient (ADC) value of DWI with known prognostic factors in resected lung cancer. A total of 227 patients with resected lung cancers were enrolled in this study. FEG-PET/CT and DWI were performed in each patient before surgery. There were 168 patients with adenocarcinoma, 44 patients with squamous cell carcinoma, and 15 patients with other cell types. SUVmax was a factor that was correlated to T factor, N factor, or cell differentiation. ADC of lung cancer was a factor that was not correlated to T factor, or N factor. There was a significantly weak inverse relationship between SUVmax and ADC (Correlation coefficient r = - 0.227). In analysis of survival, there were significant differences between the categories of sex, age, pT factor, pN factor, cell differentiation, cell type, and SUVmax. Univariate analysis revealed that SUVmax, pN factor, age, cell differentiation, cell type, sex, and pT factor were significant factors. Multivariate analysis revealed that SUVmax and pN factor were independent significant prognostic factors. SUVmax was a significant prognostic factor that is correlated to T factor, N factor, or cell differentiation, but ADC was not. SUVmax may be more useful for predicting the prognosis of lung cancer than ADC values.
On the Kendall Correlation Coefficient
Stepanov, Alexei
2015-01-01
In the present paper, we first discuss the Kendall rank correlation coefficient. In continuous case, we define the Kendall rank correlation coefficient in terms of the concomitants of order statistics, find the expected value of the Kendall rank correlation coefficient and show that the later is free of n. We also prove that in continuous case the Kendall correlation coefficient converges in probability to its expected value. We then propose to consider the expected value of the Kendall rank ...
Clustering Coefficients for Correlation Networks.
Masuda, Naoki; Sakaki, Michiko; Ezaki, Takahiro; Watanabe, Takamitsu
2018-01-01
Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other) measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node) are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients were strongly
Clustering Coefficients for Correlation Networks
Directory of Open Access Journals (Sweden)
Naoki Masuda
2018-03-01
Full Text Available Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients
Clustering Coefficients for Correlation Networks
Masuda, Naoki; Sakaki, Michiko; Ezaki, Takahiro; Watanabe, Takamitsu
2018-01-01
Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other) measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node) are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients were strongly
Correlation coefficients in neutron β-decay
International Nuclear Information System (INIS)
Byrne, J.
1978-01-01
The various angular and polarisation coefficients in neutron decay are the principal sources of information on the β-interaction. Measurements of the electron-neutrino angular correlation coefficient (a), the neutron-spin-electron-momentum correlation coefficient (A), the neutron-spin-neutrino-momentum correlation coefficient (B), and the triple correlation coefficient D and time-reversal invariance are reviewed and the results discussed. (U.K.)
correlation between maximum dry density and cohesion of ...
African Journals Online (AJOL)
HOD
investigation on sandy soils to determine the correlation between relative density and compaction test parameter. Using twenty soil samples, they were able to develop correlations between relative density, coefficient of uniformity and maximum dry density. Khafaji [5] using standard proctor compaction method carried out an ...
Wavelet Correlation Coefficient of 'strongly correlated' financial time series
Razdan, Ashok
2003-01-01
In this paper we use wavelet concepts to show that correlation coefficient between two financial data's is not constant but varies with scale from high correlation value to strongly anti-correlation value This studies is important because correlation coefficient is used to quantify degree of independence between two variables. In econophysics correlation coefficient forms important input to evolve hierarchial tree and minimum spanning tree of financial data.
Alternatives to Pearson's and Spearman's Correlation Coefficients
Smarandache, Florentin
2008-01-01
This article presents several alternatives to Pearson's correlation coefficient and many examples. In the samples where the rank in a discrete variable counts more than the variable values, the mixtures that we propose of Pearson's and Spearman's correlation coefficients give better results.
Estimation of the simple correlation coefficient.
Shieh, Gwowen
2010-11-01
This article investigates some unfamiliar properties of the Pearson product-moment correlation coefficient for the estimation of simple correlation coefficient. Although Pearson's r is biased, except for limited situations, and the minimum variance unbiased estimator has been proposed in the literature, researchers routinely employ the sample correlation coefficient in their practical applications, because of its simplicity and popularity. In order to support such practice, this study examines the mean squared errors of r and several prominent formulas. The results reveal specific situations in which the sample correlation coefficient performs better than the unbiased and nearly unbiased estimators, facilitating recommendation of r as an effect size index for the strength of linear association between two variables. In addition, related issues of estimating the squared simple correlation coefficient are also considered.
correlation between maximum dry density and cohesion
African Journals Online (AJOL)
HOD
represents maximum dry density, signifies plastic limit and is liquid limit. Researchers [6, 7] estimate compaction parameters. Aside from the correlation existing between compaction parameters and other physical quantities there are some other correlations that have been investigated by other researchers. The well-known.
A new proposal for Lagrangian correlation coefficient
International Nuclear Information System (INIS)
Altinsoy, N.; Tugrul, A.B.
2002-01-01
The statistical description of dispersion in turbulent flow was first considered by Taylor (Proc. London Math. Soc. 20 (1921) 196) and the statistical properties of the field were determined by Lagrangian correlation coefficient R L (τ). Frenkiel (Adv. Appl. Mech. 3 (1953) 61) has proposed several simple forms for R L (τ). Some workers have investigated for a proper form of the Lagrangian correlation coefficient. In this work, a new proposal for the Lagrangian correlation coefficient is proposed and discussed. It can be written in general form with the one of the Frenkiel's (Adv. Appl. Mech. 3 (1953) 61) Lagrangian correlation coefficient. There is very satisfactory agreement between the new correlation and the experiment
Correlation Coefficients: Appropriate Use and Interpretation.
Schober, Patrick; Boer, Christa; Schwarte, Lothar A
2018-05-01
Correlation in the broadest sense is a measure of an association between variables. In correlated data, the change in the magnitude of 1 variable is associated with a change in the magnitude of another variable, either in the same (positive correlation) or in the opposite (negative correlation) direction. Most often, the term correlation is used in the context of a linear relationship between 2 continuous variables and expressed as Pearson product-moment correlation. The Pearson correlation coefficient is typically used for jointly normally distributed data (data that follow a bivariate normal distribution). For nonnormally distributed continuous data, for ordinal data, or for data with relevant outliers, a Spearman rank correlation can be used as a measure of a monotonic association. Both correlation coefficients are scaled such that they range from -1 to +1, where 0 indicates that there is no linear or monotonic association, and the relationship gets stronger and ultimately approaches a straight line (Pearson correlation) or a constantly increasing or decreasing curve (Spearman correlation) as the coefficient approaches an absolute value of 1. Hypothesis tests and confidence intervals can be used to address the statistical significance of the results and to estimate the strength of the relationship in the population from which the data were sampled. The aim of this tutorial is to guide researchers and clinicians in the appropriate use and interpretation of correlation coefficients.
Temporal correlation coefficient for directed networks.
Büttner, Kathrin; Salau, Jennifer; Krieter, Joachim
2016-01-01
Previous studies dealing with network theory focused mainly on the static aggregation of edges over specific time window lengths. Thus, most of the dynamic information gets lost. To assess the quality of such a static aggregation the temporal correlation coefficient can be calculated. It measures the overall possibility for an edge to persist between two consecutive snapshots. Up to now, this measure is only defined for undirected networks. Therefore, we introduce the adaption of the temporal correlation coefficient to directed networks. This new methodology enables the distinction between ingoing and outgoing edges. Besides a small example network presenting the single calculation steps, we also calculated the proposed measurements for a real pig trade network to emphasize the importance of considering the edge direction. The farm types at the beginning of the pork supply chain showed clearly higher values for the outgoing temporal correlation coefficient compared to the farm types at the end of the pork supply chain. These farm types showed higher values for the ingoing temporal correlation coefficient. The temporal correlation coefficient is a valuable tool to understand the structural dynamics of these systems, as it assesses the consistency of the edge configuration. The adaption of this measure for directed networks may help to preserve meaningful additional information about the investigated network that might get lost if the edge directions are ignored.
Correlation and prediction of gaseous diffusion coefficients.
Marrero, T. R.; Mason, E. A.
1973-01-01
A new correlation method for binary gaseous diffusion coefficients from very low temperatures to 10,000 K is proposed based on an extended principle of corresponding states, and having greater range and accuracy than previous correlations. There are two correlation parameters that are related to other physical quantities and that are predictable in the absence of diffusion measurements. Quantum effects and composition dependence are included, but high-pressure effects are not. The results are directly applicable to multicomponent mixtures.
Clustering stocks using partial correlation coefficients
Jung, Sean S.; Chang, Woojin
2016-11-01
A partial correlation analysis is performed on the Korean stock market (KOSPI). The difference between Pearson correlation and the partial correlation is analyzed and it is found that when conditioned on the market return, Pearson correlation coefficients are generally greater than those of the partial correlation, which implies that the market return tends to drive up the correlation between stock returns. A clustering analysis is then performed to study the market structure given by the partial correlation analysis and the members of the clusters are compared with the Global Industry Classification Standard (GICS). The initial hypothesis is that the firms in the same GICS sector are clustered together since they are in a similar business and environment. However, the result is inconsistent with the hypothesis and most clusters are a mix of multiple sectors suggesting that the traditional approach of using sectors to determine the proximity between stocks may not be sufficient enough to diversify a portfolio.
Analytic posteriors for Pearson's correlation coefficient.
Ly, Alexander; Marsman, Maarten; Wagenmakers, Eric-Jan
2018-02-01
Pearson's correlation is one of the most common measures of linear dependence. Recently, Bernardo (11th International Workshop on Objective Bayes Methodology, 2015) introduced a flexible class of priors to study this measure in a Bayesian setting. For this large class of priors, we show that the (marginal) posterior for Pearson's correlation coefficient and all of the posterior moments are analytic. Our results are available in the open-source software package JASP.
Analytic posteriors for Pearson's correlation coefficient
Ly, A.; Marsman, M.; Wagenmakers, E.-J.
2018-01-01
Pearson's correlation is one of the most common measures of linear dependence. Recently, Bernardo (11th International Workshop on Objective Bayes Methodology, 2015) introduced a flexible class of priors to study this measure in a Bayesian setting. For this large class of priors, we show that the (marginal) posterior for Pearson's correlation coefficient and all of the posterior moments are analytic. Our results are available in the open‐source software package JASP.
The Evolution of Pearson's Correlation Coefficient
Kader, Gary D.; Franklin, Christine A.
2008-01-01
This article describes an activity for developing the notion of association between two quantitative variables. By exploring a collection of scatter plots, the authors propose a nonstandard "intuitive" measure of association; and by examining properties of this measure, they develop the more standard measure, Pearson's Correlation Coefficient. The…
Design of wind turbine airfoils based on maximum power coefficient
DEFF Research Database (Denmark)
Cheng, Jiangtao; Chen, Jin; Cheng, Jiangtao
2010-01-01
Based on the blade element momentum (BEM) theory, the power coefficient of a wind turbine can be expressed in function of local tip speed ratio and lift-drag ratio. By taking the power coefficient in a predefined range of angle of attack as the final design objective and combining with an airfoil...
Modeling maximum daily temperature using a varying coefficient regression model
Han Li; Xinwei Deng; Dong-Yum Kim; Eric P. Smith
2014-01-01
Relationships between stream water and air temperatures are often modeled using linear or nonlinear regression methods. Despite a strong relationship between water and air temperatures and a variety of models that are effective for data summarized on a weekly basis, such models did not yield consistently good predictions for summaries such as daily maximum temperature...
A comparison of two indices for the intraclass correlation coefficient.
Shieh, Gwowen
2012-12-01
In the present study, we examined the behavior of two indices for measuring the intraclass correlation in the one-way random effects model: the prevailing ICC(1) (Fisher, 1938) and the corrected eta-squared (Bliese & Halverson, 1998). These two procedures differ both in their methods of estimating the variance components that define the intraclass correlation coefficient and in their performance of bias and mean squared error in the estimation of the intraclass correlation coefficient. In contrast with the natural unbiased principle used to construct ICC(1), in the present study it was analytically shown that the corrected eta-squared estimator is identical to the maximum likelihood estimator and the pairwise estimator under equal group sizes. Moreover, the empirical results obtained from the present Monte Carlo simulation study across various group structures revealed the mutual dominance relationship between their truncated versions for negative values. The corrected eta-squared estimator performs better than the ICC(1) estimator when the underlying population intraclass correlation coefficient is small. Conversely, ICC(1) has a clear advantage over the corrected eta-squared for medium and large magnitudes of population intraclass correlation coefficient. The conceptual description and numerical investigation provide guidelines to help researchers choose between the two indices for more accurate reliability analysis in multilevel research.
Forecast Correlation Coefficient Matrix of Stock Returns in Portfolio Analysis
Zhao, Feng
2013-01-01
In Modern Portfolio Theory, the correlation coefficients decide the risk of a set of stocks in the portfolio. So, to understand the correlation coefficients between returns of stocks, is a challenge but is very important for the portfolio management. Usually, the stocks with small correlation coefficients or even negative correlation coefficients are preferred. One can calculate the correlation coefficients of stock returns based on the historical stock data. However, in order to control the ...
The Attenuation of Correlation Coefficients: A Statistical Literacy Issue
Trafimow, David
2016-01-01
Much of the science reported in the media depends on correlation coefficients. But the size of correlation coefficients depends, in part, on the reliability with which the correlated variables are measured. Understanding this is a statistical literacy issue.
Ghost imaging based on Pearson correlation coefficients
International Nuclear Information System (INIS)
Yu Wen-Kai; Yao Xu-Ri; Liu Xue-Feng; Li Long-Zhen; Zhai Guang-Jie
2015-01-01
Correspondence imaging is a new modality of ghost imaging, which can retrieve a positive/negative image by simple conditional averaging of the reference frames that correspond to relatively large/small values of the total intensity measured at the bucket detector. Here we propose and experimentally demonstrate a more rigorous and general approach in which a ghost image is retrieved by calculating a Pearson correlation coefficient between the bucket detector intensity and the brightness at a given pixel of the reference frames, and at the next pixel, and so on. Furthermore, we theoretically provide a statistical interpretation of these two imaging phenomena, and explain how the error depends on the sample size and what kind of distribution the error obeys. According to our analysis, the image signal-to-noise ratio can be greatly improved and the sampling number reduced by means of our new method. (paper)
Object detection by correlation coefficients using azimuthally averaged reference projections.
Nicholson, William V
2004-11-01
A method of computing correlation coefficients for object detection that takes advantage of using azimuthally averaged reference projections is described and compared with two alternative methods-computing a cross-correlation function or a local correlation coefficient versus the azimuthally averaged reference projections. Two examples of an application from structural biology involving the detection of projection views of biological macromolecules in electron micrographs are discussed. It is found that a novel approach to computing a local correlation coefficient versus azimuthally averaged reference projections, using a rotational correlation coefficient, outperforms using a cross-correlation function and a local correlation coefficient in object detection from simulated images with a range of levels of simulated additive noise. The three approaches perform similarly in detecting macromolecular views in electron microscope images of a globular macrolecular complex (the ribosome). The rotational correlation coefficient outperforms the other methods in detection of keyhole limpet hemocyanin macromolecular views in electron micrographs.
Modified Regression Correlation Coefficient for Poisson Regression Model
Kaengthong, Nattacha; Domthong, Uthumporn
2017-09-01
This study gives attention to indicators in predictive power of the Generalized Linear Model (GLM) which are widely used; however, often having some restrictions. We are interested in regression correlation coefficient for a Poisson regression model. This is a measure of predictive power, and defined by the relationship between the dependent variable (Y) and the expected value of the dependent variable given the independent variables [E(Y|X)] for the Poisson regression model. The dependent variable is distributed as Poisson. The purpose of this research was modifying regression correlation coefficient for Poisson regression model. We also compare the proposed modified regression correlation coefficient with the traditional regression correlation coefficient in the case of two or more independent variables, and having multicollinearity in independent variables. The result shows that the proposed regression correlation coefficient is better than the traditional regression correlation coefficient based on Bias and the Root Mean Square Error (RMSE).
Analytic posteriors for Pearson's correlation coefficient
Ly, A.; Marsman, M.; Wagenmakers, E.-J.
2018-01-01
Pearson's correlation is one of the most common measures of linear dependence. Recently, Bernardo (11th International Workshop on Objective Bayes Methodology, 2015) introduced a flexible class of priors to study this measure in a Bayesian setting. For this large class of priors, we show that the
A Note on the Correlated Random Coefficient Model
DEFF Research Database (Denmark)
Kolodziejczyk, Christophe
In this note we derive the bias of the OLS estimator for a correlated random coefficient model with one random coefficient, but which is correlated with a binary variable. We provide set-identification to the parameters of interest of the model. We also show how to reduce the bias of the estimator...
Testing the Difference of Correlated Agreement Coefficients for Statistical Significance
Gwet, Kilem L.
2016-01-01
This article addresses the problem of testing the difference between two correlated agreement coefficients for statistical significance. A number of authors have proposed methods for testing the difference between two correlated kappa coefficients, which require either the use of resampling methods or the use of advanced statistical modeling…
Lei, Ning; Chiang, Kwo-Fu; Oudrari, Hassan; Xiong, Xiaoxiong
2011-01-01
Optical sensors aboard Earth orbiting satellites such as the next generation Visible/Infrared Imager/Radiometer Suite (VIIRS) assume that the sensors radiometric response in the Reflective Solar Bands (RSB) is described by a quadratic polynomial, in relating the aperture spectral radiance to the sensor Digital Number (DN) readout. For VIIRS Flight Unit 1, the coefficients are to be determined before launch by an attenuation method, although the linear coefficient will be further determined on-orbit through observing the Solar Diffuser. In determining the quadratic polynomial coefficients by the attenuation method, a Maximum Likelihood approach is applied in carrying out the least-squares procedure. Crucial to the Maximum Likelihood least-squares procedure is the computation of the weight. The weight not only has a contribution from the noise of the sensor s digital count, with an important contribution from digitization error, but also is affected heavily by the mathematical expression used to predict the value of the dependent variable, because both the independent and the dependent variables contain random noise. In addition, model errors have a major impact on the uncertainties of the coefficients. The Maximum Likelihood approach demonstrates the inadequacy of the attenuation method model with a quadratic polynomial for the retrieved spectral radiance. We show that using the inadequate model dramatically increases the uncertainties of the coefficients. We compute the coefficient values and their uncertainties, considering both measurement and model errors.
Accounting for Missing Correlation Coefficients in Fixed-Effects MASEM.
Jak, Suzanne; Cheung, Mike W-L
2018-01-01
Meta-analytic structural equation modeling (MASEM) is increasingly applied to advance theories by synthesizing existing findings. MASEM essentially consists of two stages. In Stage 1, a pooled correlation matrix is estimated based on the reported correlation coefficients in the individual studies. In Stage 2, a structural model (such as a path model) is fitted to explain the pooled correlations. Frequently, the individual studies do not provide all the correlation coefficients between the research variables. In this study, we modify the currently optimal MASEM-method to deal with missing correlation coefficients, and compare its performance with existing methods. This study is the first to evaluate the performance of fixed-effects MASEM methods under different levels of missing correlation coefficients. We found that the often used univariate methods performed very poorly, while the multivariate methods performed well overall.
Diabetic Erythrocytes Test by Correlation Coefficient
Korol, A.M; Foresto, P; Darrigo, M; Rosso, O.A
2008-01-01
Even when a healthy individual is studied, his/her erythrocytes in capillaries continually change their shape in a synchronized erratic fashion. In this work, the problem of characterizing the cell behavior is studied from the perspective of bounded correlated random walk, based on the assumption that diffractometric data involves both deterministic and stochastic components. The photometric readings are obtained by ektacytometry over several millions of shear elongated cells, using a home-made device called Erythrodeformeter. We have only a scalar signal and no governing equations; therefore the complete behavior has to be reconstructed in an artificial phase space. To analyze dynamics we used the technique of time delay coordinates suggested by Takens, May algorithm, and Fourier transform. The results suggest that on random-walk approach the samples from healthy controls exhibit significant differences from those from diabetic patients and these could allow us to claim that we have linked mathematical nonlinear tools with clinical aspects of diabetic erythrocytes’ rheological properties. PMID:19415139
Pearson's correlation coefficient in the theory of networks: A comment
Ahmed, Zafar; Kumar, Sachin
2018-01-01
In statistics, the Pearson correlation coefficient $r_{x,y}$ determines the degree of linear correlation between two variables and it is known that $-1 \\le r_{x,y} \\le 1$. In the theory of networks, a curious expression proposed in [PRL {\\bf 89} 208701 (2002)] for degree-degree correlation coefficient $r_{j_i,k_i}, i\\in [1,M]$ has been in use. We realize that the suggested form is the conventional Pearson's coefficient for $\\{(j_i,k_i), (k_i,j_i)\\}$ for $2M$ data points and hence it is rightl...
Someswara Rao, Chinta; Viswanadha Raju, S.
2016-01-01
In this paper, we consider correlation coefficient, rank correlation coefficient and cosine similarity measures for evaluating similarity between Homo sapiens and monkeys. We used DNA chromosomes of genome wide genes to determine the correlation between the chromosomal content and evolutionary relationship. The similarity among the H. sapiens and monkeys is measured for a total of 210 chromosomes related to 10 species. The similarity measures of these different species show the relationship b...
[Electroencephalogram Feature Selection Based on Correlation Coefficient Analysis].
Zhou, Jinzhi; Tang, Xiaofang
2015-08-01
In order to improve the accuracy of classification with small amount of motor imagery training data on the development of brain-computer interface (BCD systems, we proposed an analyzing method to automatically select the characteristic parameters based on correlation coefficient analysis. Throughout the five sample data of dataset IV a from 2005 BCI Competition, we utilized short-time Fourier transform (STFT) and correlation coefficient calculation to reduce the number of primitive electroencephalogram dimension, then introduced feature extraction based on common spatial pattern (CSP) and classified by linear discriminant analysis (LDA). Simulation results showed that the average rate of classification accuracy could be improved by using correlation coefficient feature selection method than those without using this algorithm. Comparing with support vector machine (SVM) optimization features algorithm, the correlation coefficient analysis can lead better selection parameters to improve the accuracy of classification.
Zhang, Juping; Yang, Chan; Jin, Zhen; Li, Jia
2018-07-14
In this paper, the correlation coefficients between nodes in states are used as dynamic variables, and we construct SIR epidemic dynamic models with correlation coefficients by using the pair approximation method in static networks and dynamic networks, respectively. Considering the clustering coefficient of the network, we analytically investigate the existence and the local asymptotic stability of each equilibrium of these models and derive threshold values for the prevalence of diseases. Additionally, we obtain two equivalent epidemic thresholds in dynamic networks, which are compared with the results of the mean field equations. Copyright © 2018 Elsevier Ltd. All rights reserved.
Limits of the memory coefficient in measuring correlated bursts
Jo, Hang-Hyun; Hiraoka, Takayuki
2018-03-01
Temporal inhomogeneities in event sequences of natural and social phenomena have been characterized in terms of interevent times and correlations between interevent times. The inhomogeneities of interevent times have been extensively studied, while the correlations between interevent times, often called correlated bursts, are far from being fully understood. For measuring the correlated bursts, two relevant approaches were suggested, i.e., memory coefficient and burst size distribution. Here a burst size denotes the number of events in a bursty train detected for a given time window. Empirical analyses have revealed that the larger memory coefficient tends to be associated with the heavier tail of the burst size distribution. In particular, empirical findings in human activities appear inconsistent, such that the memory coefficient is close to 0, while burst size distributions follow a power law. In order to comprehend these observations, by assuming the conditional independence between consecutive interevent times, we derive the analytical form of the memory coefficient as a function of parameters describing interevent time and burst size distributions. Our analytical result can explain the general tendency of the larger memory coefficient being associated with the heavier tail of burst size distribution. We also find that the apparently inconsistent observations in human activities are compatible with each other, indicating that the memory coefficient has limits to measure the correlated bursts.
Statistical Study of Turbulence: Spectral Functions and Correlation Coefficients
Frenkiel, Francois N.
1958-01-01
In reading the publications on turbulence of different authors, one often runs the risk of confusing the various correlation coefficients and turbulence spectra. We have made a point of defining, by appropriate concepts, the differences which exist between these functions. Besides, we introduce in the symbols a few new characteristics of turbulence. In the first chapter, we study some relations between the correlation coefficients and the different turbulence spectra. Certain relations are given by means of demonstrations which could be called intuitive rather than mathematical. In this way we demonstrate that the correlation coefficients between the simultaneous turbulent velocities at two points are identical, whether studied in Lagrange's or in Euler's systems. We then consider new spectra of turbulence, obtained by study of the simultaneous velocities along a straight line of given direction. We determine some relations between these spectra and the correlation coefficients. Examining the relation between the spectrum of the turbulence measured at a fixed point and the longitudinal-correlation curve given by G. I. Taylor, we find that this equation is exact only when the coefficient is very small.
Someswara Rao, Chinta; Viswanadha Raju, S
2016-03-01
In this paper, we consider correlation coefficient, rank correlation coefficient and cosine similarity measures for evaluating similarity between Homo sapiens and monkeys. We used DNA chromosomes of genome wide genes to determine the correlation between the chromosomal content and evolutionary relationship. The similarity among the H. sapiens and monkeys is measured for a total of 210 chromosomes related to 10 species. The similarity measures of these different species show the relationship between the H. sapiens and monkey. This similarity will be helpful at theft identification, maternity identification, disease identification, etc.
Distributing Correlation Coefficients of Linear Structure-Activity/Property Models
Directory of Open Access Journals (Sweden)
Sorana D. BOLBOACA
2011-12-01
Full Text Available Quantitative structure-activity/property relationships are mathematical relationships linking chemical structure and activity/property in a quantitative manner. These in silico approaches are frequently used to reduce animal testing and risk-assessment, as well as to increase time- and cost-effectiveness in characterization and identification of active compounds. The aim of our study was to investigate the pattern of correlation coefficients distribution associated to simple linear relationships linking the compounds structure with their activities. A set of the most common ordnance compounds found at naval facilities with a limited data set with a range of toxicities on aquatic ecosystem and a set of seven properties was studied. Statistically significant models were selected and investigated. The probability density function of the correlation coefficients was investigated using a series of possible continuous distribution laws. Almost 48% of the correlation coefficients proved fit Beta distribution, 40% fit Generalized Pareto distribution, and 12% fit Pert distribution.
Highlighting material structure with transmission electron diffraction correlation coefficient maps
International Nuclear Information System (INIS)
Kiss, Ákos K.; Rauch, Edgar F.; Lábár, János L.
2016-01-01
Correlation coefficient maps are constructed by computing the differences between neighboring diffraction patterns collected in a transmission electron microscope in scanning mode. The maps are shown to highlight material structural features like grain boundaries, second phase particles or dislocations. The inclination of the inner crystal interfaces are directly deduced from the resulting contrast. - Highlights: • We propose a novel technique to image the structure of polycrystalline TEM-samples. • Correlation coefficients maps highlights the evolution of the diffracting signal. • 3D views of grain boundaries are provided for nano-particles or polycrystals.
Minimum disturbance rewards with maximum possible classical correlations
Energy Technology Data Exchange (ETDEWEB)
Pande, Varad R., E-mail: varad_pande@yahoo.in [Department of Physics, Indian Institute of Science Education and Research Pune, 411008 (India); Shaji, Anil [School of Physics, Indian Institute of Science Education and Research Thiruvananthapuram, 695016 (India)
2017-07-12
Weak measurements done on a subsystem of a bipartite system having both classical and nonClassical correlations between its components can potentially reveal information about the other subsystem with minimal disturbance to the overall state. We use weak quantum discord and the fidelity between the initial bipartite state and the state after measurement to construct a cost function that accounts for both the amount of information revealed about the other system as well as the disturbance to the overall state. We investigate the behaviour of the cost function for families of two qubit states and show that there is an optimal choice that can be made for the strength of the weak measurement. - Highlights: • Weak measurements done on one part of a bipartite system with controlled strength. • Weak quantum discord & fidelity used to quantify all correlations and disturbance. • Cost function to probe the tradeoff between extracted correlations and disturbance. • Optimal measurement strength for maximum extraction of classical correlations.
DEFF Research Database (Denmark)
Cherchi, Elisabetta; Guevara, Cristian
2012-01-01
with cross-sectional or with panel data, and (d) EM systematically attained more efficient estimators than the MSL method. The results imply that if the purpose of the estimation is only to determine the ratios of the model parameters (e.g., the value of time), the EM method should be preferred. For all......The random coefficients logit model allows a more realistic representation of agents' behavior. However, the estimation of that model may involve simulation, which may become impractical with many random coefficients because of the curse of dimensionality. In this paper, the traditional maximum...... simulated likelihood (MSL) method is compared with the alternative expectation- maximization (EM) method, which does not require simulation. Previous literature had shown that for cross-sectional data, MSL outperforms the EM method in the ability to recover the true parameters and estimation time...
A new correlation for two-phase critical discharge coefficient
International Nuclear Information System (INIS)
Park, Jong Woon; Chun, Moon Hyun
1989-01-01
A new simple correlation for subcooled and two-phase critical flow discharge coefficient has been developed by stepwise regression technique. The new discharge coefficient has three independent variables and they are length to hydraulic diameter ratio, degree of subcooling, and stagnation temperature. The new discharge coefficient is applied as a multiplier to homogeneous equilibrium model and Abauf's single phase critical mass flux calculation equation. This method has been tested for its accuracy by comparing with experimental data. Results of the comparison show that the agreement between the predictions with new correlation and the experimental data is good for pipes and nozzles with vertical upward flow for subcooled upstream condition and nozzles with horizontal configuration for two-phase upstream condition
Variability, correlation and path coefficient analysis of seedling traits ...
African Journals Online (AJOL)
use
2011-12-12
Dec 12, 2011 ... Indirect selection is a useful means for improving yield in cotton crop. The objective of the present study was to determine the genetic variability, broad sense heritability, genetic advance and correlation among the six seedling traits and their direct and indirect effects on cotton yield by using path coefficient ...
Variability, correlation and path coefficient analysis of seedling traits ...
African Journals Online (AJOL)
Indirect selection is a useful means for improving yield in cotton crop. The objective of the present study was to determine the genetic variability, broad sense heritability, genetic advance and correlation among the six seedling traits and their direct and indirect effects on cotton yield by using path coefficient analysis.
On the misinterpretation of the correlation coefficient in pharmaceutical sciences
DEFF Research Database (Denmark)
Sonnergaard, Jørn
2006-01-01
The correlation coefficient is often used and more often misused as a universal parameter expressing the quality in linear regression analysis. The popularity of this dimensionless quantity is evident as it is easy to communicate and considered to be unproblematic to comprehend. However, illustra...
Time correlation functions and transport coefficients in a dilute superfluid
International Nuclear Information System (INIS)
Kirkpatrick, T.R.; Dorfman, J.R.
1985-01-01
Time correlation functions for the transport coefficients in the linear Landau-Khalatnikov equations are derived on the basis of a formal theory. These Green--Kubo expressions are then explicitly evaluated for a dilute superfluid and the resulting transport coefficiencts are shown to be identical to those obtained previously by using a distribution function method
Correlation Revelation: The Search for Meaning in Pearson's Coefficient
Huhn, Craig
2016-01-01
When the author was first charged with getting a group of students to understand the correlation coefficient, he did not anticipate the topic would challenge his own understanding, let alone cause him to eventually question the very nature of mathematics itself. On the surface, the idea seemed straightforward, one that millions of students across…
Modeling Concordance Correlation Coefficient for Longitudinal Study Data
Ma, Yan; Tang, Wan; Yu, Qin; Tu, X. M.
2010-01-01
Measures of agreement are used in a wide range of behavioral, biomedical, psychosocial, and health-care related research to assess reliability of diagnostic test, psychometric properties of instrument, fidelity of psychosocial intervention, and accuracy of proxy outcome. The concordance correlation coefficient (CCC) is a popular measure of…
Highlighting material structure with transmission electron diffraction correlation coefficient maps.
Kiss, Ákos K; Rauch, Edgar F; Lábár, János L
2016-04-01
Correlation coefficient maps are constructed by computing the differences between neighboring diffraction patterns collected in a transmission electron microscope in scanning mode. The maps are shown to highlight material structural features like grain boundaries, second phase particles or dislocations. The inclination of the inner crystal interfaces are directly deduced from the resulting contrast. Copyright © 2016 Elsevier B.V. All rights reserved.
A correlation to the heat transfer coefficient in nucleate boiling
International Nuclear Information System (INIS)
Ribatski, Gherhardt; Jabardo, Jose M. Saiz
1999-01-01
Nucleate boiling heat transfer is a complex phenomenon, making the development of a correlation for the heat transfer coefficient rather cumbersome due to the number of physical parameters involved in it. Some authors have followed a pragmatic approach to the problem by correlating the heat transfer coefficient in terms of reduced primitive properties. Two of the most knowledgeable authors who have followed this approach are Gorenflo and Cooper. Comparisons have been performed among results from the correlations proposed by these researchers and experimental results obtained elsewhere for refrigerants R-11, R-113 and R-114. These comparisons have shown that Cooper's correlation is best fitted for halocarbon refrigerants. The correlation proposed by Gorenflo ads the difficulty of including a numerical factor specific for each fluid. Leiner modified Gorenflo's correlation to determine the numerical factor as a function of known physical parameters of the fluid. In present study, the form of this function has been investigated for halocarbon refrigerants. The obtained correlation is written in terms of the following parameters: reduced pressure, eccentric and compressibility factors at the critical state, and a dimensionless specific heat of the vapor phase. The correlation compares well with experimental results. (author)
Directory of Open Access Journals (Sweden)
Michel Moraes Gonçalves
2017-06-01
Full Text Available It was our objective to correlate specific performance in the Special Judo Fitness Test (SJFT and the maximum isometric handgrip (HGSMax, scapular traction (STSMax and lumbar traction (LTSMax strength tests in military judo athletes. Twenty-two military athletes from the judo team of the Brazilian Navy Almirante Alexandrino Instruction Centre, with average age of 26.14 ± 3.31 years old, and average body mass of 83.23 ± 14.14 kg participated in the study. Electronic dynamometry tests for HGSMax, STSMax and LTSMax were conducted. Then, after approximately 1 hour-interval, the SJFT protocol was applied. All variables were adjusted to the body mass of the athletes. Pearson correlation coefficient for statistical analysis was used. The results showed moderate negative correlation between the SJFT index and STSMax (r= -0.550, p= 0.008, strong negative correlations between the SJFT index and HGSMax (r= -0.706, p< 0.001, SJFT index and LTSMax (r= -0.721; p= 0.001, besides the correlation between the sum of the three maximum isometric strength tests and the SJFT index (r= -0.786, p< 0.001. This study concludes that negative correlations occur between the SJFT index and maximum isometric handgrip, shoulder and lumbar traction strength and the sum of the three maximum isometric strength tests in military judokas.
Surov, Alexey; Meyer, Hans Jonas; Wienke, Andreas
2017-07-01
Diffusion-weighted imaging (DWI) is a magnetic resonance imaging (MRI) technique based on measure of water diffusion that can provide information about tissue microstructure, especially about cell count. Increase of cell density induces restriction of water diffusion and decreases apparent diffusion coefficient (ADC). ADC can be divided into three sub-parameters: ADC minimum or ADC min , mean ADC or ADC mean and ADC maximum or ADC max Some studies have suggested that ADC min shows stronger correlations with cell count in comparison to other ADC fractions and may be used as a parameter for estimation of tumor cellularity. The aim of the present meta-analysis was to summarize correlation coefficients between ADC min and cellularity in different tumors based on large patient data. For this analysis, MEDLINE database was screened for associations between ADC and cell count in different tumors up to September 2016. For this work, only data regarding ADC min were included. Overall, 12 publications with 317 patients were identified. Spearman's correlation coefficient was used to analyze associations between ADC min and cellularity. The reported Pearson correlation coefficients in some publications were converted into Spearman correlation coefficients. The pooled correlation coefficient for all included studies was ρ=-0.59 (95% confidence interval (CI)=-0.72 to -0.45), heterogeneity Tau 2 =0.04 (pcorrelated moderately with tumor cellularity. The calculated correlation coefficient is not stronger in comparison to the reported coefficient for ADC mean and, therefore, ADC min does not represent a better means to reflect cellularity. Copyright© 2017, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved.
Apparent diffusion coefficient correlation with oesophageal tumour stroma and angiogenesis
Energy Technology Data Exchange (ETDEWEB)
Aoyagi, Tomoyoshi; Shuto, Kiyohiko; Okazumi, Shinichi; Hayano, Kohichi; Satoh, Asami; Saitoh, Hiroshige; Shimada, Hideaki; Nabeya, Yoshihiro; Matsubara, Hisahiro [Chiba University, Department of Frontier Surgery, Graduate School of Medicine, Chiba (Japan); Kazama, Toshiki [Chiba University, Department of Radiology, Graduate School of Medicine, Chiba (Japan)
2012-06-15
Because diffusion-weighted imaging (DWI) can predict the prognosis of patients with oesophageal squamous cell carcinoma (ESCC), we hypothesised that apparent diffusion coefficient (ADC) values might be correlated with the collagen content and tumour angiogenesis. The purpose of this study was to determine the correlation between ADC values of ESCC before treatment and oesophageal tumour stroma and angiogenesis. Seventeen patients with ESCC were enrolled. The ADC values were calculated from the DWI score. Seventeen patients who had undergone oesophagectomy were analysed for tumour stroma, vascular endothelial growth factor (VEGF) and CD34. Tissue collagen was stained with azocarmine and aniline blue to quantitatively analyse the extracellular matrix in cancer stroma. Tissues were stained with VEGF and CD34 to analyse the angiogenesis. The ADC values decreased with stromal collagen growth. We found a negative correlation between the tumour ADC and the amount of stromal collagen (r = -0.729, P = 0.001), i.e. the ADC values decreased with growth of VEGF. We also found a negative correlation between the ADC of the tumours and the amount of VEGF (r = 0.538, P = 0.026). Our results indicated that the ADC value may be a novel prognostic factor and contribute to the treatment of oesophageal cancer. circle Magnetic resonance apparent diffusion coefficient values inversely indicate tumour stromal collagen circle There is also negative correlation between ADCs and vascular endothelial growth factor circle ADC values may contribute to the treatment of oesophageal cancer. (orig.)
Apparent diffusion coefficient correlation with oesophageal tumour stroma and angiogenesis
International Nuclear Information System (INIS)
Aoyagi, Tomoyoshi; Shuto, Kiyohiko; Okazumi, Shinichi; Hayano, Kohichi; Satoh, Asami; Saitoh, Hiroshige; Shimada, Hideaki; Nabeya, Yoshihiro; Matsubara, Hisahiro; Kazama, Toshiki
2012-01-01
Because diffusion-weighted imaging (DWI) can predict the prognosis of patients with oesophageal squamous cell carcinoma (ESCC), we hypothesised that apparent diffusion coefficient (ADC) values might be correlated with the collagen content and tumour angiogenesis. The purpose of this study was to determine the correlation between ADC values of ESCC before treatment and oesophageal tumour stroma and angiogenesis. Seventeen patients with ESCC were enrolled. The ADC values were calculated from the DWI score. Seventeen patients who had undergone oesophagectomy were analysed for tumour stroma, vascular endothelial growth factor (VEGF) and CD34. Tissue collagen was stained with azocarmine and aniline blue to quantitatively analyse the extracellular matrix in cancer stroma. Tissues were stained with VEGF and CD34 to analyse the angiogenesis. The ADC values decreased with stromal collagen growth. We found a negative correlation between the tumour ADC and the amount of stromal collagen (r = -0.729, P = 0.001), i.e. the ADC values decreased with growth of VEGF. We also found a negative correlation between the ADC of the tumours and the amount of VEGF (r = 0.538, P = 0.026). Our results indicated that the ADC value may be a novel prognostic factor and contribute to the treatment of oesophageal cancer. circle Magnetic resonance apparent diffusion coefficient values inversely indicate tumour stromal collagen circle There is also negative correlation between ADCs and vascular endothelial growth factor circle ADC values may contribute to the treatment of oesophageal cancer. (orig.)
Generalization of Clustering Coefficients to Signed Correlation Networks
Costantini, Giulio; Perugini, Marco
2014-01-01
The recent interest in network analysis applications in personality psychology and psychopathology has put forward new methodological challenges. Personality and psychopathology networks are typically based on correlation matrices and therefore include both positive and negative edge signs. However, some applications of network analysis disregard negative edges, such as computing clustering coefficients. In this contribution, we illustrate the importance of the distinction between positive and negative edges in networks based on correlation matrices. The clustering coefficient is generalized to signed correlation networks: three new indices are introduced that take edge signs into account, each derived from an existing and widely used formula. The performances of the new indices are illustrated and compared with the performances of the unsigned indices, both on a signed simulated network and on a signed network based on actual personality psychology data. The results show that the new indices are more resistant to sample variations in correlation networks and therefore have higher convergence compared with the unsigned indices both in simulated networks and with real data. PMID:24586367
Correlation of Cadmium Distribution Coefficients to Soil Characteristics
DEFF Research Database (Denmark)
Holm, Peter Engelund; Rootzen, Helle; Borggaard, Ole K.
2003-01-01
on whole soil samples have shown that pH is the main parameter controlling the distribution. To identify further the components that are important for Cd binding in soil we measured Cd distribution coefficients (K-d) at two fixed pH values and at low Cd loadings for 49 soils sampled in Denmark. The Kd...... values for Cd ranged from 5 to 3000 L kg(-1). The soils were described pedologically and characterized in detail (22 parameters) including determination of contents of the various minerals in the clay fraction. Correlating parameters were grouped and step-wise regression analysis revealed...... interlayered clay minerals [HIM], chlorite, quartz, microcline, plagioclase) were significant in explaining the Cd distribution coefficient....
Wang, Gang-Jin; Xie, Chi; Chen, Shou; Yang, Jiao-Jiao; Yang, Ming-Yan
2013-09-01
In this study, we first build two empirical cross-correlation matrices in the US stock market by two different methods, namely the Pearson’s correlation coefficient and the detrended cross-correlation coefficient (DCCA coefficient). Then, combining the two matrices with the method of random matrix theory (RMT), we mainly investigate the statistical properties of cross-correlations in the US stock market. We choose the daily closing prices of 462 constituent stocks of S&P 500 index as the research objects and select the sample data from January 3, 2005 to August 31, 2012. In the empirical analysis, we examine the statistical properties of cross-correlation coefficients, the distribution of eigenvalues, the distribution of eigenvector components, and the inverse participation ratio. From the two methods, we find some new results of the cross-correlations in the US stock market in our study, which are different from the conclusions reached by previous studies. The empirical cross-correlation matrices constructed by the DCCA coefficient show several interesting properties at different time scales in the US stock market, which are useful to the risk management and optimal portfolio selection, especially to the diversity of the asset portfolio. It will be an interesting and meaningful work to find the theoretical eigenvalue distribution of a completely random matrix R for the DCCA coefficient because it does not obey the Marčenko-Pastur distribution.
International Nuclear Information System (INIS)
Beer, M.
1980-01-01
The maximum likelihood method for the multivariate normal distribution is applied to the case of several individual eigenvalues. Correlated Monte Carlo estimates of the eigenvalue are assumed to follow this prescription and aspects of the assumption are examined. Monte Carlo cell calculations using the SAM-CE and VIM codes for the TRX-1 and TRX-2 benchmark reactors, and SAM-CE full core results are analyzed with this method. Variance reductions of a few percent to a factor of 2 are obtained from maximum likelihood estimation as compared with the simple average and the minimum variance individual eigenvalue. The numerical results verify that the use of sample variances and correlation coefficients in place of the corresponding population statistics still leads to nearly minimum variance estimation for a sufficient number of histories and aggregates
A short note on jackknifing the concordance correlation coefficient.
Feng, Dai; Baumgartner, Richard; Svetnik, Vladimir
2014-02-10
Lin's concordance correlation coefficient (CCC) is a very popular scaled index of agreement used in applied statistics. To obtain a confidence interval (CI) for the estimate of CCC, jackknifing was proposed and shown to perform well in simulation as well as in applications. However, a theoretical proof of the validity of the jackknife CI for the CCC has not been presented yet. In this note, we establish a sufficient condition for using the jackknife method to construct the CI for the CCC. Copyright © 2013 John Wiley & Sons, Ltd.
Relative azimuth inversion by way of damped maximum correlation estimates
Ringler, A.T.; Edwards, J.D.; Hutt, C.R.; Shelly, F.
2012-01-01
Horizontal seismic data are utilized in a large number of Earth studies. Such work depends on the published orientations of the sensitive axes of seismic sensors relative to true North. These orientations can be estimated using a number of different techniques: SensOrLoc (Sensitivity, Orientation and Location), comparison to synthetics (Ekstrom and Busby, 2008), or by way of magnetic compass. Current methods for finding relative station azimuths are unable to do so with arbitrary precision quickly because of limitations in the algorithms (e.g. grid search methods). Furthermore, in order to determine instrument orientations during station visits, it is critical that any analysis software be easily run on a large number of different computer platforms and the results be obtained quickly while on site. We developed a new technique for estimating relative sensor azimuths by inverting for the orientation with the maximum correlation to a reference instrument, using a non-linear parameter estimation routine. By making use of overlapping windows, we are able to make multiple azimuth estimates, which helps to identify the confidence of our azimuth estimate, even when the signal-to-noise ratio (SNR) is low. Finally, our algorithm has been written as a stand-alone, platform independent, Java software package with a graphical user interface for reading and selecting data segments to be analyzed.
Spatially varying cross-correlation coefficients in the presence of nugget effects
Kleiber, William; Genton, Marc G.
2012-01-01
We derive sufficient conditions for the cross-correlation coefficient of a multivariate spatial process to vary with location when the spatial model is augmented with nugget effects. The derived class is valid for any choice of covariance functions, and yields substantial flexibility between multiple processes. The key is to identify the cross-correlation coefficient matrix with a contraction matrix, which can be either diagonal, implying a parsimonious formulation, or a fully general contraction matrix, yielding greater flexibility but added model complexity. We illustrate the approach with a bivariate minimum and maximum temperature dataset in Colorado, allowing the two variables to be positively correlated at low elevations and nearly independent at high elevations, while still yielding a positive definite covariance matrix. © 2012 Biometrika Trust.
Spatially varying cross-correlation coefficients in the presence of nugget effects
Kleiber, William
2012-11-29
We derive sufficient conditions for the cross-correlation coefficient of a multivariate spatial process to vary with location when the spatial model is augmented with nugget effects. The derived class is valid for any choice of covariance functions, and yields substantial flexibility between multiple processes. The key is to identify the cross-correlation coefficient matrix with a contraction matrix, which can be either diagonal, implying a parsimonious formulation, or a fully general contraction matrix, yielding greater flexibility but added model complexity. We illustrate the approach with a bivariate minimum and maximum temperature dataset in Colorado, allowing the two variables to be positively correlated at low elevations and nearly independent at high elevations, while still yielding a positive definite covariance matrix. © 2012 Biometrika Trust.
Overcoming multicollinearity in multiple regression using correlation coefficient
Zainodin, H. J.; Yap, S. J.
2013-09-01
Multicollinearity happens when there are high correlations among independent variables. In this case, it would be difficult to distinguish between the contributions of these independent variables to that of the dependent variable as they may compete to explain much of the similar variance. Besides, the problem of multicollinearity also violates the assumption of multiple regression: that there is no collinearity among the possible independent variables. Thus, an alternative approach is introduced in overcoming the multicollinearity problem in achieving a well represented model eventually. This approach is accomplished by removing the multicollinearity source variables on the basis of the correlation coefficient values based on full correlation matrix. Using the full correlation matrix can facilitate the implementation of Excel function in removing the multicollinearity source variables. It is found that this procedure is easier and time-saving especially when dealing with greater number of independent variables in a model and a large number of all possible models. Hence, in this paper detailed insight of the procedure is shown, compared and implemented.
Measurement of the polarization correlation coefficient in elastic pp scattering at 610 MeV
International Nuclear Information System (INIS)
Borisov, N.S.; Glonti, L.N.; Kazarinov, M.Yu.
1977-01-01
The polarization correlation coefficient Csub(nn) for elastic pp scattering at 610+-10 MeV was measured for four scattering angles: 40, 67, 78 and 90 deg (c.m.s.). A polarized proton beam with a maximum polarization of 0.39+-0.02 and a polarized proton target of the frozen type were used. The maximum polarization of the target was 0.97+-0.04. The experimental procedure is described in detail. The Csub(nn) measured are compared with the results of a phase analysis and the findings at 575 MeV obtained elsewhere. The Csub(nn) coefficients are shown to be valuable to discriminate alternative solutions of the phase analysis. The polarized proton targets of the frozen type, no accounting the complexity of their design, are emphasized to be rather reliable and convenient devices for conducting experiments at accelerators
A robust bayesian estimate of the concordance correlation coefficient.
Feng, Dai; Baumgartner, Richard; Svetnik, Vladimir
2015-01-01
A need for assessment of agreement arises in many situations including statistical biomarker qualification or assay or method validation. Concordance correlation coefficient (CCC) is one of the most popular scaled indices reported in evaluation of agreement. Robust methods for CCC estimation currently present an important statistical challenge. Here, we propose a novel Bayesian method of robust estimation of CCC based on multivariate Student's t-distribution and compare it with its alternatives. Furthermore, we extend the method to practically relevant settings, enabling incorporation of confounding covariates and replications. The superiority of the new approach is demonstrated using simulation as well as real datasets from biomarker application in electroencephalography (EEG). This biomarker is relevant in neuroscience for development of treatments for insomnia.
Chen, Yingyuan; Cai, Lihui; Wang, Ruofan; Song, Zhenxi; Deng, Bin; Wang, Jiang; Yu, Haitao
2018-01-01
Alzheimer's disease (AD) is a degenerative disorder of neural system that affects mainly the older population. Recently, many researches show that the EEG of AD patients can be characterized by EEG slowing, enhanced complexity of the EEG signals, and EEG synchrony. In order to examine the neural synchrony at multi scales, and to find a biomarker that help detecting AD in diagnosis, detrended cross-correlation analysis (DCCA) of EEG signals is applied in this paper. Several parameters, namely DCCA coefficients in the whole brain, DCCA coefficients at a specific scale, maximum DCCA coefficient over the span of all time scales and the corresponding scale of such coefficients, were extracted to examine the synchronization, respectively. The results show that DCCA coefficients have a trend of increase as scale increases, and decreases as electrode distance increases. Comparing DCCA coefficients in AD patients with healthy controls, a decrease of synchronization in the whole brain, and a bigger scale corresponding to maximum correlation is discovered in AD patients. The change of max-correlation scale may relate to the slowing of oscillatory activities. Linear combination of max DCCA coefficient and max-correlation scale reaches a classification accuracy of 90%. From the above results, it is reasonable to conclude that DCCA coefficient reveals the change of both oscillation and synchrony in AD, and thus is a powerful tool to differentiate AD patients from healthy elderly individuals.
Feng, Dai; Svetnik, Vladimir; Coimbra, Alexandre; Baumgartner, Richard
2014-01-01
The intraclass correlation coefficient (ICC) with fixed raters or, equivalently, the concordance correlation coefficient (CCC) for continuous outcomes is a widely accepted aggregate index of agreement in settings with small number of raters. Quantifying the precision of the CCC by constructing its confidence interval (CI) is important in early drug development applications, in particular in qualification of biomarker platforms. In recent years, there have been several new methods proposed for construction of CIs for the CCC, but their comprehensive comparison has not been attempted. The methods consisted of the delta method and jackknifing with and without Fisher's Z-transformation, respectively, and Bayesian methods with vague priors. In this study, we carried out a simulation study, with data simulated from multivariate normal as well as heavier tailed distribution (t-distribution with 5 degrees of freedom), to compare the state-of-the-art methods for assigning CI to the CCC. When the data are normally distributed, the jackknifing with Fisher's Z-transformation (JZ) tended to provide superior coverage and the difference between it and the closest competitor, the Bayesian method with the Jeffreys prior was in general minimal. For the nonnormal data, the jackknife methods, especially the JZ method, provided the coverage probabilities closest to the nominal in contrast to the others which yielded overly liberal coverage. Approaches based upon the delta method and Bayesian method with conjugate prior generally provided slightly narrower intervals and larger lower bounds than others, though this was offset by their poor coverage. Finally, we illustrated the utility of the CIs for the CCC in an example of a wake after sleep onset (WASO) biomarker, which is frequently used in clinical sleep studies of drugs for treatment of insomnia.
The Betz-Joukowsky limit for the maximum power coefficient of wind turbines
DEFF Research Database (Denmark)
Okulov, Valery; van Kuik, G.A.M.
2009-01-01
The article addresses to a history of an important scientific result in wind energy. The maximum efficiency of an ideal wind turbine rotor is well known as the ‘Betz limit’, named after the German scientist that formulated this maximum in 1920. Also Lanchester, a British scientist, is associated...
Directory of Open Access Journals (Sweden)
Xin Dai
2017-10-01
Full Text Available Maximum power transfer tracking (MPTT is meant to track the maximum power point during the system operation of wireless power transfer (WPT systems. Traditionally, MPTT is achieved by impedance matching at the secondary side when the load resistance is varied. However, due to a loosely coupling characteristic, the variation of coupling coefficient will certainly affect the performance of impedance matching, therefore MPTT will fail accordingly. This paper presents an identification method of coupling coefficient for MPTT in WPT systems. Especially, the two-value issue during the identification is considered. The identification approach is easy to implement because it does not require additional circuit. Furthermore, MPTT is easy to realize because only two easily measured DC parameters are needed. The detailed identification procedure corresponding to the two-value issue and the maximum power transfer tracking process are presented, and both the simulation analysis and experimental results verified the identification method and MPTT.
CSIR Research Space (South Africa)
Kok, S
2012-07-01
Full Text Available continuously as the correlation function hyper-parameters approach zero. Since the global minimizer of the maximum likelihood function is an asymptote in this case, it is unclear if maximum likelihood estimation (MLE) remains valid. Numerical ill...
Correlation of heat transfer coefficient in quenching process using ABAQUS
Davare, Sandeep Kedarnath; Balachandran, G.; Singh, R. K. P.
2018-04-01
During the heat treatment by quenching in a liquid medium the convective heat transfer coefficient plays a crucial role in the extraction of heat. The heat extraction ultimately influences the cooling rate and hence the hardness and mechanical properties. A Finite Element analysis of quenching a simple flat copper sample with different orientation of sample and with different quenchant temperatures were carried out to check and verify the results obtained from the experiments. The heat transfer coefficient (HTC) was calculated from temperature history in a simple flat copper disc sample experimentally. This HTC data was further used as input to simulation software and the cooling curves were back calculated. The results obtained from software and using experimentation shows nearly consistent values.
Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient.
Yao, Jianchao; Chang, Chunqi; Salmi, Mari L; Hung, Yeung Sam; Loraine, Ann; Roux, Stanley J
2008-06-18
Currently, clustering with some form of correlation coefficient as the gene similarity metric has become a popular method for profiling genomic data. The Pearson correlation coefficient and the standard deviation (SD)-weighted correlation coefficient are the two most widely-used correlations as the similarity metrics in clustering microarray data. However, these two correlations are not optimal for analyzing replicated microarray data generated by most laboratories. An effective correlation coefficient is needed to provide statistically sufficient analysis of replicated microarray data. In this study, we describe a novel correlation coefficient, shrinkage correlation coefficient (SCC), that fully exploits the similarity between the replicated microarray experimental samples. The methodology considers both the number of replicates and the variance within each experimental group in clustering expression data, and provides a robust statistical estimation of the error of replicated microarray data. The value of SCC is revealed by its comparison with two other correlation coefficients that are currently the most widely-used (Pearson correlation coefficient and SD-weighted correlation coefficient) using statistical measures on both synthetic expression data as well as real gene expression data from Saccharomyces cerevisiae. Two leading clustering methods, hierarchical and k-means clustering were applied for the comparison. The comparison indicated that using SCC achieves better clustering performance. Applying SCC-based hierarchical clustering to the replicated microarray data obtained from germinating spores of the fern Ceratopteris richardii, we discovered two clusters of genes with shared expression patterns during spore germination. Functional analysis suggested that some of the genetic mechanisms that control germination in such diverse plant lineages as mosses and angiosperms are also conserved among ferns. This study shows that SCC is an alternative to the Pearson
Statistical electron correlation coefficients for the five lowest states of the heliumlike ions
International Nuclear Information System (INIS)
Thakkar, A.J.; Smith, V.H. Jr.
1981-01-01
Statistical correlation coefficients were introduced by Kutzelnigg, Del Re, and Berthier to provide overall measures of the difference between the electron pair density and the product of one-electron densities in atoms and molecules. Some properties of these coefficients are discussed, and it is shown that an angular correlation coefficient is experimentally accessible. Radial and angular correlation coefficients are computed from highly accurate wave functions for the 1 1 S, 2 3 S, 2 1 S, 2 3 P, and 2 1 P states of the heliumlike ions from He through Mg 10+ . It is found that positive angular correlation coefficients occur in the 2 1 P state of the two-electron positive ions but not in neutral helium. Moreover, the angular correlation coefficients for the 2 1 S and 2 3 S states of the positively charged two-electron ions show that a previously proposed reformulation of Hund's rule is incorrect
SEPHIS and the distribution coefficients correlation in the IMPUREX system
International Nuclear Information System (INIS)
Andaur Iturrieta, Claudio
1997-01-01
The reprocessing of spent nuclear fuels by the IMPUREX process consists in uranium selective extraction, originally in aqueous nitric solution, by action of the tributyl phosphate (TBP) present in an organic phase that circulates at countercurrent of the aqueous one. In the study of such process, it is necessary to use the correlations that allows to predict the concentrations of the solutes in the equilibrium, both in the aqueous phase and in the organic one, given as data the ruling operation conditions (temperature, TBP concentration and acidity). A correlation of this kind is the Groenier-Rainey-Watson, which is forming part of the code of the SEPHIS simulation program. In the present work it is analyzed the behavior of this correlation contrasting the predicted values with experimental ones
Efficient tracking of the cross-correlation coefficient
Aarts, R.M.; Irwan, R.; Janssen, A.J.E.M.
2002-01-01
In many (audio) processing algorithms, involving manipulation of discrete-time signals, the performance can vary strongly over the repertoire that is used. This may be the case when the signals from the various channels are allowed to be strongly positively or negatively correlated. We propose and
147 - 154 Genetic Variability, Heritability and Correlation Coefficient
African Journals Online (AJOL)
USER
twelve upland rice genotypes during 2013 main cropping season. ... spikelet per panicle, number of filled grains per panicle and biomass yield had a positive and significant correlation ... fertilizers were applied at the rate of 100 kg per hectare. ..... ultimate effect for selecting superior varieties (Ali et al., .... (Brassica napus L.).
Multi criteria decision making using correlation coefficient under rough neutrosophic environment
Directory of Open Access Journals (Sweden)
Surapati Pramanik
2017-09-01
Full Text Available In this paper, we define correlation coefficient measure between any two rough neutrosophic sets. We also prove some of its basic properties.. We develop a new multiple attribute group decision making method based on the proposed correlation coefficient measure.
Multi criteria decision making using correlation coefficient under rough neutrosophic environment
Pramanik, Surapati; Roy, Rumi; Roy, Tapan Kumar; Smarandache, Florentin
2017-01-01
In this paper, we define correlation coefficient measure between any two rough neutrosophic sets. We also prove some of its basic properties. We develop a new multiple attribute group decision making method based on the proposed correlation coefficient measure. An illustrative example of medical diagnosis is solved to demonstrate the applicability and effecriveness of the proposed method.
Directory of Open Access Journals (Sweden)
Zhong-xing Wang
2017-11-01
Full Text Available Correlation coefficient is one of the broadly use indexes in multi-criteria decision-making (MCDM processes. However, some important issues related to correlation coefficient utilization within probabilistic hesitant fuzzy environments remain to be addressed. The purpose of this study is introduced a MCDM method based on correlation coefficients utilize probabilistic hesitant fuzzy information. First, the covariance and correlation coefficient between two PHFEs is introduced, the properties of the proposed covariance and correlation coefficient are discussed. In addition, the northwest corner rule to obtain the expected mean related to the multiply of two PHFEs is introduced. Second, the weighted correlation coefficient is proposed to make the proposed MCDM method more applicable. And the properties of the proposed weighted correlation coefficient are also discussed. Finally, an illustrative example is demonstrated the practicality and effectiveness of the proposed method. An illustrative example is presented to demonstrate the correlation coefficient propose in this paper lies in the interval [−1, 1], which not only consider the strength of relationship between the PHFEs but also whether the PHFEs are positively or negatively related. The advantage of this method is it can avoid the inconsistency of the decision-making result due to the loss of information.
Korendijk, Elly J. H.; Moerbeek, Mirjam; Maas, Cora J. M.
2010-01-01
In the case of trials with nested data, the optimal allocation of units depends on the budget, the costs, and the intracluster correlation coefficient. In general, the intracluster correlation coefficient is unknown in advance and an initial guess has to be made based on published values or subject matter knowledge. This initial estimate is likely…
Correlation coefficient measurement of the mode-locked laser tones using four-wave mixing.
Anthur, Aravind P; Panapakkam, Vivek; Vujicic, Vidak; Merghem, Kamel; Lelarge, Francois; Ramdane, Abderrahim; Barry, Liam P
2016-06-01
We use four-wave mixing to measure the correlation coefficient of comb tones in a quantum-dash mode-locked laser under passive and active locked regimes. We study the uncertainty in the measurement of the correlation coefficient of the proposed method.
Korendijk, E.J.H.; Moerbeek, M.; Maas, C.J.M.
2010-01-01
In the case of trials with nested data, the optimal allocation of units depends on the budget, the costs, and the intracluster correlation coefficient. In general, the intracluster correlation coefficient is unknown in advance and an initial guess has to be made based on published values or
Wilson, Celia M.
2010-01-01
Research pertaining to the distortion of the squared canonical correlation coefficient has traditionally been limited to the effects of sampling error and associated correction formulas. The purpose of this study was to compare the degree of attenuation of the squared canonical correlation coefficient under varying conditions of score reliability.…
International Nuclear Information System (INIS)
Park, Sang Kyoo; Yang, Hei Cheon
2017-01-01
As stricter environmental regulation have led to an increase in the water treatment cost, it is necessary to quantitatively study the input power of the aeration process to improve the energy efficiency of the water treatment processes. The objective of this study is to propose the empirical correlations for the mass transfer coefficient with the gas hold-up and input power in order to investigate the mass transfer characteristics of the aeration process. It was found that as the input power increases, the mass transfer coefficient increases because of the decrease of gas hold-up and increase of Reynolds number, the penetration length, and dispersion of mixed flow. The correlations for the volumetric mass transfer coefficients with gas hold-up and input power were consistent with the experimental data, with the maximum deviation less than approximately ±10.0%.
Energy Technology Data Exchange (ETDEWEB)
Park, Sang Kyoo; Yang, Hei Cheon [Chonnam Nat’l Univ., Gwangju (Korea, Republic of)
2017-06-15
As stricter environmental regulation have led to an increase in the water treatment cost, it is necessary to quantitatively study the input power of the aeration process to improve the energy efficiency of the water treatment processes. The objective of this study is to propose the empirical correlations for the mass transfer coefficient with the gas hold-up and input power in order to investigate the mass transfer characteristics of the aeration process. It was found that as the input power increases, the mass transfer coefficient increases because of the decrease of gas hold-up and increase of Reynolds number, the penetration length, and dispersion of mixed flow. The correlations for the volumetric mass transfer coefficients with gas hold-up and input power were consistent with the experimental data, with the maximum deviation less than approximately ±10.0%.
Empirical correlations for axial dispersion coefficient and Peclet number in fixed-bed columns.
Rastegar, Seyed Omid; Gu, Tingyue
2017-03-24
In this work, a new correlation for the axial dispersion coefficient was obtained using experimental data in the literature for axial dispersion in fixed-bed columns packed with particles. The Chung and Wen correlation, the De Ligny correlation are two popular empirical correlations. However, the former lacks the molecular diffusion term and the latter does not consider bed voidage. The new axial dispersion coefficient correlation in this work was based on additional experimental data in the literature by considering both molecular diffusion and bed voidage. It is more comprehensive and accurate. The Peclet number correlation from the new axial dispersion coefficient correlation on the average leads to 12% lower Peclet number values compared to the values from the Chung and Wen correlation, and in many cases much smaller than those from the De Ligny correlation. Copyright © 2017 Elsevier B.V. All rights reserved.
Measuring correlations between non-stationary series with DCCA coefficient
Czech Academy of Sciences Publication Activity Database
Krištoufek, Ladislav
2014-01-01
Roč. 402, č. 1 (2014), s. 291-298 ISSN 0378-4371 R&D Projects: GA ČR(CZ) GP14-11402P Grant - others:GA ČR(CZ) GAP402/11/0948 Program:GA Institutional support: RVO:67985556 Keywords : power-law cross-correlations * long - term memory * econophysics Subject RIV: AH - Economics Impact factor: 1.732, year: 2014 http://library.utia.cas.cz/separaty/2014/E/kristoufek-0433533.pdf
Detecting genuine multipartite correlations in terms of the rank of coefficient matrix
International Nuclear Information System (INIS)
Li Bo; Kwek, Leong Chuan; Fan Heng
2012-01-01
We propose a method to detect genuine quantum correlation for arbitrary quantum states in terms of the rank of coefficient matrices associated with the pure state. We then derive a necessary and sufficient condition for a quantum state to possess genuine correlation, namely that all corresponding coefficient matrices have rank larger than 1. We demonstrate an approach to decompose the genuine quantum correlated state with high rank coefficient matrix into the form of product states with no genuine quantum correlation for a pure state. (paper)
ppcor: An R Package for a Fast Calculation to Semi-partial Correlation Coefficients.
Kim, Seongho
2015-11-01
Lack of a general matrix formula hampers implementation of the semi-partial correlation, also known as part correlation, to the higher-order coefficient. This is because the higher-order semi-partial correlation calculation using a recursive formula requires an enormous number of recursive calculations to obtain the correlation coefficients. To resolve this difficulty, we derive a general matrix formula of the semi-partial correlation for fast computation. The semi-partial correlations are then implemented on an R package ppcor along with the partial correlation. Owing to the general matrix formulas, users can readily calculate the coefficients of both partial and semi-partial correlations without computational burden. The package ppcor further provides users with the level of the statistical significance with its test statistic.
Diagnosing cysts with correlation coefficient images from 2-dimensional freehand elastography.
Booi, Rebecca C; Carson, Paul L; O'Donnell, Matthew; Richards, Michael S; Rubin, Jonathan M
2007-09-01
We compared the diagnostic potential of using correlation coefficient images versus elastograms from 2-dimensional (2D) freehand elastography to characterize breast cysts. In this preliminary study, which was approved by the Institutional Review Board and compliant with the Health Insurance Portability and Accountability Act, we imaged 4 consecutive human subjects (4 cysts, 1 biopsy-verified benign breast parenchyma) with freehand 2D elastography. Data were processed offline with conventional 2D phase-sensitive speckle-tracking algorithms. The correlation coefficient in the cyst and surrounding tissue was calculated, and appearances of the cysts in the correlation coefficient images and elastograms were compared. The correlation coefficient in the cysts was considerably lower (14%-37%) than in the surrounding tissue because of the lack of sufficient speckle in the cysts, as well as the prominence of random noise, reverberations, and clutter, which decorrelated quickly. Thus, the cysts were visible in all correlation coefficient images. In contrast, the elastograms associated with these cysts each had different elastographic patterns. The solid mass in this study did not have the same high decorrelation rate as the cysts, having a correlation coefficient only 2.1% lower than that of surrounding tissue. Correlation coefficient images may produce a more direct, reliable, and consistent method for characterizing cysts than elastograms.
Genetic Variability, Correlation Studies and Path Coefficient Analysis in Gladiolus Alatus Cultivars
International Nuclear Information System (INIS)
Ramzan, A.; Nawab, N. N.; Tariq, M. S.; Ikram, S.; Ahad, A.
2016-01-01
A study was undertaken to find out the estimates of genetic variability, genetic parameters and character association among different flower traits between three gladiolus cultivars viz: Sancerre, Fado and Advanced Red. The experiment was repeated three times by using RCBD (Randomized complete block design) at Department of Horticulture, PMAS-UAAR, Rawalpindi. The highest genotypic coefficient variation (GCV) and phenotypic coefficient variation (PCV) magnitude was observed for spike length (16.00) and number of florets per spike (14.84) followed by number of leaves (10.00). Among the traits studied the highest heritability estimates was recorded in spike length (99.5 percent) followed by number of florets/spike (99.6 percent) and lowest in plant height (98.2 percent). The genetic advance as percent of mean was ranged from 2.8 percent to 24.75 percent. Genetic advance was highest for floret breadth (24.75 percent) and lowest for plant height (2.8 percent). High heritability combined with high genetic advance was noticed for number of florets per spike, spike length and floret breadth indicating additive gene action which suggested that improvement of these traits would be effective for further selection of superior genotypes. Plant height and number of florets per spike showed highly positive and significant association with spike length, number of leaves, leaf area, floret length and floret breadth while, spike length registered positive and significant correlation with number of leaves and floret breadth. The path coefficient analysis based on spike length, as responsible variable exposed that all of the traits exerted direct positive effect except leaf area and floret length. Spike length imparted maximum positive direct effect on the number of florets per spike. Hence, spike length and number of florets per spike may be considered for further improvement. However, Floret length and floret breadth may also be considered as a criterion for selection. (author)
Comparing two K-category assignments by a K-category correlation coefficient
DEFF Research Database (Denmark)
Gorodkin, Jan
2004-01-01
Predicted assignments of biological sequences are often evaluated by Matthews correlation coefficient. However, Matthews correlation coefficient applies only to cases where the assignments belong to two categories, and cases with more than two categories are often artificially forced into two...... categories by considering what belongs and what does not belong to one of the categories, leading to the loss of information. Here, an extended correlation coefficient that applies to K-categories is proposed, and this measure is shown to be highly applicable for evaluating prediction of RNA secondary...
Statistics corner: A guide to appropriate use of correlation coefficient in medical research.
Mukaka, M M
2012-09-01
Correlation is a statistical method used to assess a possible linear association between two continuous variables. It is simple both to calculate and to interpret. However, misuse of correlation is so common among researchers that some statisticians have wished that the method had never been devised at all. The aim of this article is to provide a guide to appropriate use of correlation in medical research and to highlight some misuse. Examples of the applications of the correlation coefficient have been provided using data from statistical simulations as well as real data. Rule of thumb for interpreting size of a correlation coefficient has been provided.
Krijnen, WP
De Vries (1993) discusses Pearson's product-moment correlation, Spearman's rank correlation, and Kendall's rank-correlation coefficient for assessing the association between the rows of two proximity matrices. For each of these he introduces a weighted average variant and a rowwise variant. In this
KRIJNEN, WP
De Vries (1993) discusses Pearson's product-moment correlation, Spearman's rank correlation, and Kendall's rank-correlation coefficient for assessing the association between the rows of two proximity matrices. For each of these he introduces a weighted average variant and a rowwise variant. In this
Beijeren, H. van; Kehr, K.W.
1986-01-01
The correlation factor, defined as the ratio between the tracer diffusion coefficient in lattice gases and the diffusion coefficient for a corresponding uncorrelated random walk, is known to assume a very simple form under certain conditions. A simple derivation of this is given with the aid of
Wang, Fang; Wang, Lin; Chen, Yuming
2017-08-31
In order to investigate the time-dependent cross-correlations of fine particulate (PM2.5) series among neighboring cities in Northern China, in this paper, we propose a new cross-correlation coefficient, the time-lagged q-L dependent height crosscorrelation coefficient (denoted by p q (τ, L)), which incorporates the time-lag factor and the fluctuation amplitude information into the analogous height cross-correlation analysis coefficient. Numerical tests are performed to illustrate that the newly proposed coefficient ρ q (τ, L) can be used to detect cross-correlations between two series with time lags and to identify different range of fluctuations at which two series possess cross-correlations. Applying the new coefficient to analyze the time-dependent cross-correlations of PM2.5 series between Beijing and the three neighboring cities of Tianjin, Zhangjiakou, and Baoding, we find that time lags between the PM2.5 series with larger fluctuations are longer than those between PM2.5 series withsmaller fluctuations. Our analysis also shows that cross-correlations between the PM2.5 series of two neighboring cities are significant and the time lags between two PM2.5 series of neighboring cities are significantly non-zero. These findings providenew scientific support on the view that air pollution in neighboring cities can affect one another not simultaneously but with a time lag.
Determining Sample Size for Accurate Estimation of the Squared Multiple Correlation Coefficient.
Algina, James; Olejnik, Stephen
2000-01-01
Discusses determining sample size for estimation of the squared multiple correlation coefficient and presents regression equations that permit determination of the sample size for estimating this parameter for up to 20 predictor variables. (SLD)
Correlation Coefficients of Extended Hesitant Fuzzy Sets and Their Applications to Decision Making
Directory of Open Access Journals (Sweden)
Na Lu
2017-03-01
Full Text Available Extended hesitant fuzzy sets (EHFSs, which allow the membership degree of an element to a set represented by several possible value-groups, can be considered as a powerful tool to express uncertain information in the process of group decision making. Therefore, we derive some correlation coefficients between EHFSs, which contain two cases, the correlation coefficients taking into account the length of extended hesitant fuzzy elements (EHFEs and the correlation coefficients without taking into account the length of EHFEs, as a new extension of existing correlation coefficients for hesitant fuzzy sets (HFSs and apply them to decision making under extended hesitant fuzzy environments. A real-world example based on the energy policy problem is employed to illustrate the actual need for dealing with the difference of evaluation information provided by different experts without information loss in decision making processes.
Observations of copolar correlation coefficient through a bright band at vertical incidence
Zrnic, D. S.; Raghavan, R.; Chandrasekar, V.
1994-01-01
This paper discusses an application of polarimetric measurements at vertical incidence. In particular, the correlation coefficients between linear copolar components are examined, and measurements obtained with the National Severe Storms Laboratory (NSSL)'s and National Center for Atmospheric Research (NCAR)'s polarimetric radars are presented. The data are from two well-defined bright bands. A sharp decrease of the correlation coefficient, confined to a height interval of a few hundred meters, marks the bottom of the bright band.
Quantifying the range of cross-correlated fluctuations using a q- L dependent AHXA coefficient
Wang, Fang; Wang, Lin; Chen, Yuming
2018-03-01
Recently, based on analogous height cross-correlation analysis (AHXA), a cross-correlation coefficient ρ×(L) has been proposed to quantify the levels of cross-correlation on different temporal scales for bivariate series. A limitation of this coefficient is that it cannot capture the full information of cross-correlations on amplitude of fluctuations. In fact, it only detects the cross-correlation at a specific order fluctuation, which might neglect some important information inherited from other order fluctuations. To overcome this disadvantage, in this work, based on the scaling of the qth order covariance and time delay L, we define a two-parameter dependent cross-correlation coefficient ρq(L) to detect and quantify the range and level of cross-correlations. This new version of ρq(L) coefficient leads to the formation of a ρq(L) surface, which not only is able to quantify the level of cross-correlations, but also allows us to identify the range of fluctuation amplitudes that are correlated in two given signals. Applications to the classical ARFIMA models and the binomial multifractal series illustrate the feasibility of this new coefficient ρq(L) . In addition, a statistical test is proposed to quantify the existence of cross-correlations between two given series. Applying our method to the real life empirical data from the 1999-2000 California electricity market, we find that the California power crisis in 2000 destroys the cross-correlation between the price and the load series but does not affect the correlation of the load series during and before the crisis.
Wavelet based correlation coefficient of time series of Saudi Meteorological Data
International Nuclear Information System (INIS)
Rehman, S.; Siddiqi, A.H.
2009-01-01
In this paper, wavelet concepts are used to study a correlation between pairs of time series of meteorological parameters such as pressure, temperature, rainfall, relative humidity and wind speed. The study utilized the daily average values of meteorological parameters of nine meteorological stations of Saudi Arabia located at different strategic locations. The data used in this study cover a period of 16 years between 1990 and 2005. Besides obtaining wavelet spectra, we also computed the wavelet correlation coefficients between two same parameters from two different locations and show that strong correlation or strong anti-correlation depends on scale. The cross-correlation coefficients of meteorological parameters between two stations were also calculated using statistical function. For coastal to costal pair of stations, pressure time series was found to be strongly correlated. In general, the temperature data were found to be strongly correlated for all pairs of stations and the rainfall data the least.
Sample size for estimation of the Pearson correlation coefficient in cherry tomato tests
Directory of Open Access Journals (Sweden)
Bruno Giacomini Sari
2017-09-01
Full Text Available ABSTRACT: The aim of this study was to determine the required sample size for estimation of the Pearson coefficient of correlation between cherry tomato variables. Two uniformity tests were set up in a protected environment in the spring/summer of 2014. The observed variables in each plant were mean fruit length, mean fruit width, mean fruit weight, number of bunches, number of fruits per bunch, number of fruits, and total weight of fruits, with calculation of the Pearson correlation matrix between them. Sixty eight sample sizes were planned for one greenhouse and 48 for another, with the initial sample size of 10 plants, and the others were obtained by adding five plants. For each planned sample size, 3000 estimates of the Pearson correlation coefficient were obtained through bootstrap re-samplings with replacement. The sample size for each correlation coefficient was determined when the 95% confidence interval amplitude value was less than or equal to 0.4. Obtaining estimates of the Pearson correlation coefficient with high precision is difficult for parameters with a weak linear relation. Accordingly, a larger sample size is necessary to estimate them. Linear relations involving variables dealing with size and number of fruits per plant have less precision. To estimate the coefficient of correlation between productivity variables of cherry tomato, with a confidence interval of 95% equal to 0.4, it is necessary to sample 275 plants in a 250m² greenhouse, and 200 plants in a 200m² greenhouse.
DEFF Research Database (Denmark)
Tatomirescu, Alexandru; Buskgaard, Emil Feldborg; Pedersen, Gert Frølund
2014-01-01
. The MIMO performance is investigated in two different channel models through efficiency, branch power imbalance and envelope correlation. The proposed antennas have acceptable levels of isolation between them, even in the low-bands, while having a good efficiency. Furthermore, the correlation coefficient...
Reducing Bias and Error in the Correlation Coefficient Due to Nonnormality
Bishara, Anthony J.; Hittner, James B.
2015-01-01
It is more common for educational and psychological data to be nonnormal than to be approximately normal. This tendency may lead to bias and error in point estimates of the Pearson correlation coefficient. In a series of Monte Carlo simulations, the Pearson correlation was examined under conditions of normal and nonnormal data, and it was compared…
International Nuclear Information System (INIS)
Pathak, R.K.
1985-01-01
Statistical electron angular correlation coefficients tau = 2 2 He through 14 Si, within the Hohenberg-Kohn-Sham density-functional formalism. These are computed with use of the spectral sum rules obtained from the pseudoexcitation spectrum employing the recent formulation of the time-dependent Kohn-Sham theory due to Bartolotti. Various approximations to the exchange-correlation energy functional are used and for first-row atoms, a comparison is made with the highly accurate correlation coefficients recently obtained by Thakkar. The present tau values show closer agreement with those of Thakkar with increasing number of electrons
Cohen, S. C.
1980-01-01
A technique for fitting a straight line to a collection of data points is given. The relationships between the slopes and correlation coefficients, and between the corresponding standard deviations and correlation coefficient are given.
Toropov, Andrey A; Toropova, Alla P; Raska, Ivan; Benfenati, Emilio
2010-04-01
Three different splits into the subtraining set (n = 22), the set of calibration (n = 21), and the test set (n = 12) of 55 antineoplastic agents have been examined. By the correlation balance of SMILES-based optimal descriptors quite satisfactory models for the octanol/water partition coefficient have been obtained on all three splits. The correlation balance is the optimization of a one-variable model with a target function that provides both the maximal values of the correlation coefficient for the subtraining and calibration set and the minimum of the difference between the above-mentioned correlation coefficients. Thus, the calibration set is a preliminary test set. Copyright (c) 2009 Elsevier Masson SAS. All rights reserved.
International Nuclear Information System (INIS)
Wang, L.; Feng, S.
1989-01-01
The relation between the reflection coefficients and the Green's function for a coherent wave propagation in a disordered elastic-scattering medium is derived. The sum rule of the reflection and transmission coefficients corresponding to probability conservation is shown rigorously for an arbitrary scattering potential. The correlation function of the reflection coefficients is then calculated by using a Feynman-diagrammatic approach in the weak-localized multiple-scattering regime (L much-gt l much-gt λ). The result is in agreement with recent experiments on the so-called ''memory effect'' in reflection coefficients. A more general condition under which the memory effect can occur is derived. Differences between the the correlation functions for reflection and that for transmission are discussed
Rana, Santosh; Dhanotia, Jitendra; Bhatia, Vimal; Prakash, Shashi
2018-04-01
In this paper, we propose a simple, fast, and accurate technique for detection of collimation position of an optical beam using the self-imaging phenomenon and correlation analysis. Herrera-Fernandez et al. [J. Opt.18, 075608 (2016)JOOPDB0150-536X10.1088/2040-8978/18/7/075608] proposed an experimental arrangement for collimation testing by comparing the period of two different self-images produced by a single diffraction grating. Following their approach, we propose a testing procedure based on correlation coefficient (CC) for efficient detection of variation in the size and fringe width of the Talbot self-images and thereby the collimation position. When the beam is collimated, the physical properties of the self-images of the grating, such as its size and fringe width, do not vary from one Talbot plane to the other and are identical; the CC is maximum in such a situation. For the de-collimated position, the size and fringe width of the self-images vary, and correspondingly the CC decreases. Hence, the magnitude of CC is a measure of degree of collimation. Using the method, we could set the collimation position to a resolution of 1 μm, which relates to ±0.25 μ radians in terms of collimation angle (for testing a collimating lens of diameter 46 mm and focal length 300 mm). In contrast to most collimation techniques reported to date, the proposed technique does not require a translation/rotation of the grating, use of complicated phase evaluation algorithms, or an intricate method for determination of period of the grating or its self-images. The technique is fully automated and provides high resolution and precision.
New external convective heat transfer coefficient correlations for isolated low-rise buildings
Energy Technology Data Exchange (ETDEWEB)
Emmel, M. G.; Mendes, N. [Pontifical Catholic University of Parana, PUCPR/CCET, Thermal Systems Laboratory, LST, Curitiba (Brazil); Abadie, M. O. [Pontifical Catholic University of Parana, PUCPR/CCET, Thermal Systems Laboratory, LST, Curitiba (Brazil); Laboratoire d' Etude des Phenomenes de Transfert Appliques au batiment (LEPTAB), University of La Rochelle, La Rochelle (France)
2007-07-01
Building energy analyses are very sensitive to external convective heat transfer coefficients so that some researchers have conducted sensitivity calculations and proved that depending on the choice of those coefficients, energy demands estimation values can vary from 20% to 40%. In this context, computational fluid dynamics calculations have been performed to predict convective heat transfer coefficients at the external surfaces of a simple shape low-rise building. Effects of wind velocity and orientation have been analyzed considering four surface-to-air temperature differences. Results show that the convective heat transfer coefficient value strongly depends on the wind velocity, that the wind direction has a notable effect for vertical walls and for roofs and that the surface-to-air temperature difference has a negligible effect for wind velocity higher than 2 m/s. External convective heat transfer coefficient correlations are provided as a function of the wind free stream velocity and wind-to-surface angle. (author)
Directory of Open Access Journals (Sweden)
Shumanova M.V.
2015-03-01
Full Text Available The process fish salting has been studied by the method of photon correlation spectroscopy; the distribution of salt concentration in the solution and herring flesh with skin has been found, diffusion coefficients and salt concentrations used for creating a mathematical model of the salting technology have been worked out; the possibility of determination by this method the coefficient of dynamic viscosity of solutions and different media (minced meat etc. has been considered
DEFF Research Database (Denmark)
Boesen, Lars; Chabanova, Elizaveta; Løgager, Vibeke
2015-01-01
PURPOSE: To evaluate the correlation between apparent diffusion coefficient measurements (ADCtumor and ADCratio ) and the Gleason score from radical prostatectomy specimens. MATERIALS AND METHODS: Seventy-one patients with clinically localized prostate cancer scheduled for radical prostatectomy...... correlated with the Gleason score from the prostatectomy specimens. RESULTS: The association between ADC measurements and Gleason score showed a significant negative correlation (P ... ) and 0.90 (ADCratio ) when discriminating Gleason score ≤7(3+4) from Gleason score ≥7(4+3). CONCLUSION: ADC measurements showed a significant correlation with tumor Gleason score at final pathology. The ADCratio demonstrated the best correlation compared to the ADCtumor value and radically improved...
Li, Cun-Yu; Wu, Xin; Gu, Jia-Mei; Li, Hong-Yang; Peng, Guo-Ping
2018-04-01
Based on the molecular sieving and solution-diffusion effect in nanofiltration separation, the correlation between initial concentration and mass transfer coefficient of three typical phenolic acids from Salvia miltiorrhiza was fitted to analyze the relationship among mass transfer coefficient, molecular weight and concentration. The experiment showed a linear relationship between operation pressure and membrane flux. Meanwhile, the membrane flux was gradually decayed with the increase of solute concentration. On the basis of the molecular sieving and solution-diffusion effect, the mass transfer coefficient and initial concentration of three phenolic acids showed a power function relationship, and the regression coefficients were all greater than 0.9. The mass transfer coefficient and molecular weight of three phenolic acids were negatively correlated with each other, and the order from high to low is protocatechualdehyde >rosmarinic acid> salvianolic acid B. The separation mechanism of nanofiltration for phenolic acids was further clarified through the analysis of the correlation of molecular weight and nanofiltration mass transfer coefficient. The findings provide references for nanofiltration separation, especially for traditional Chinese medicine with phenolic acids. Copyright© by the Chinese Pharmaceutical Association.
Liu, An-Nuo; Wang, Lu-Lu; Li, Hui-Ping; Gong, Juan; Liu, Xiao-Hong
2017-05-01
The literature on posttraumatic growth (PTG) is burgeoning, with the inconsistencies in the literature of the relationship between PTG and posttraumatic stress disorder (PTSD) symptoms becoming a focal point of attention. Thus, this meta-analysis aims to explore the relationship between PTG and PTSD symptoms through the Pearson correlation coefficient. A systematic search of the literature from January 1996 to November 2015 was completed. We retrieved reports on 63 studies that involved 26,951 patients. The weighted correlation coefficient revealed an effect size of 0.22 with a 95% confidence interval of 0.18 to 0.25. Meta-analysis provides evidence that PTG may be positively correlated with PTSD symptoms and that this correlation may be modified by age, trauma type, and time since trauma. Accordingly, people with high levels of PTG should not be ignored, but rather, they should continue to receive help to alleviate their PTSD symptoms.
Xu, Jiucheng; Mu, Huiyu; Wang, Yun; Huang, Fangzhou
2018-01-01
The selection of feature genes with high recognition ability from the gene expression profiles has gained great significance in biology. However, most of the existing methods have a high time complexity and poor classification performance. Motivated by this, an effective feature selection method, called supervised locally linear embedding and Spearman's rank correlation coefficient (SLLE-SC 2 ), is proposed which is based on the concept of locally linear embedding and correlation coefficient algorithms. Supervised locally linear embedding takes into account class label information and improves the classification performance. Furthermore, Spearman's rank correlation coefficient is used to remove the coexpression genes. The experiment results obtained on four public tumor microarray datasets illustrate that our method is valid and feasible.
Quantized correlation coefficient for measuring reproducibility of ChIP-chip data
Directory of Open Access Journals (Sweden)
Kuroda Mitzi I
2010-07-01
Full Text Available Abstract Background Chromatin immunoprecipitation followed by microarray hybridization (ChIP-chip is used to study protein-DNA interactions and histone modifications on a genome-scale. To ensure data quality, these experiments are usually performed in replicates, and a correlation coefficient between replicates is used often to assess reproducibility. However, the correlation coefficient can be misleading because it is affected not only by the reproducibility of the signal but also by the amount of binding signal present in the data. Results We develop the Quantized correlation coefficient (QCC that is much less dependent on the amount of signal. This involves discretization of data into set of quantiles (quantization, a merging procedure to group the background probes, and recalculation of the Pearson correlation coefficient. This procedure reduces the influence of the background noise on the statistic, which then properly focuses more on the reproducibility of the signal. The performance of this procedure is tested in both simulated and real ChIP-chip data. For replicates with different levels of enrichment over background and coverage, we find that QCC reflects reproducibility more accurately and is more robust than the standard Pearson or Spearman correlation coefficients. The quantization and the merging procedure can also suggest a proper quantile threshold for separating signal from background for further analysis. Conclusions To measure reproducibility of ChIP-chip data correctly, a correlation coefficient that is robust to the amount of signal present should be used. QCC is one such measure. The QCC statistic can also be applied in a variety of other contexts for measuring reproducibility, including analysis of array CGH data for DNA copy number and gene expression data.
Quantized correlation coefficient for measuring reproducibility of ChIP-chip data.
Peng, Shouyong; Kuroda, Mitzi I; Park, Peter J
2010-07-27
Chromatin immunoprecipitation followed by microarray hybridization (ChIP-chip) is used to study protein-DNA interactions and histone modifications on a genome-scale. To ensure data quality, these experiments are usually performed in replicates, and a correlation coefficient between replicates is used often to assess reproducibility. However, the correlation coefficient can be misleading because it is affected not only by the reproducibility of the signal but also by the amount of binding signal present in the data. We develop the Quantized correlation coefficient (QCC) that is much less dependent on the amount of signal. This involves discretization of data into set of quantiles (quantization), a merging procedure to group the background probes, and recalculation of the Pearson correlation coefficient. This procedure reduces the influence of the background noise on the statistic, which then properly focuses more on the reproducibility of the signal. The performance of this procedure is tested in both simulated and real ChIP-chip data. For replicates with different levels of enrichment over background and coverage, we find that QCC reflects reproducibility more accurately and is more robust than the standard Pearson or Spearman correlation coefficients. The quantization and the merging procedure can also suggest a proper quantile threshold for separating signal from background for further analysis. To measure reproducibility of ChIP-chip data correctly, a correlation coefficient that is robust to the amount of signal present should be used. QCC is one such measure. The QCC statistic can also be applied in a variety of other contexts for measuring reproducibility, including analysis of array CGH data for DNA copy number and gene expression data.
Yue, Chen; Chen, Shaojie; Sair, Haris I; Airan, Raag; Caffo, Brian S
2015-09-01
Data reproducibility is a critical issue in all scientific experiments. In this manuscript, the problem of quantifying the reproducibility of graphical measurements is considered. The image intra-class correlation coefficient (I2C2) is generalized and the graphical intra-class correlation coefficient (GICC) is proposed for such purpose. The concept for GICC is based on multivariate probit-linear mixed effect models. A Markov Chain Monte Carlo EM (mcm-cEM) algorithm is used for estimating the GICC. Simulation results with varied settings are demonstrated and our method is applied to the KIRBY21 test-retest dataset.
Choosing the best index for the average score intraclass correlation coefficient.
Shieh, Gwowen
2016-09-01
The intraclass correlation coefficient (ICC)(2) index from a one-way random effects model is widely used to describe the reliability of mean ratings in behavioral, educational, and psychological research. Despite its apparent utility, the essential property of ICC(2) as a point estimator of the average score intraclass correlation coefficient is seldom mentioned. This article considers several potential measures and compares their performance with ICC(2). Analytical derivations and numerical examinations are presented to assess the bias and mean square error of the alternative estimators. The results suggest that more advantageous indices can be recommended over ICC(2) for their theoretical implication and computational ease.
Batterson, Sidney A.
1959-01-01
An experimental investigation was made at the Langley landing loads track to obtain data on the maximum spin-up coefficients of friction developed by a landing gear having a static-load rating of 20,000 pounds. The forward speeds ranged from 0 to approximately 180 feet per second and the sinking speeds, from 2.7 feet per second to 9.4 feet per second. The results indicated the variation of the maximum spin-up coefficient of friction with forward speed and vertical load. Data obtained during this investigation are also compared with some results previously obtained for nonrolling tires to show the effect of forward speed.
Barlow, Andrew L; Macleod, Alasdair; Noppen, Samuel; Sanderson, Jeremy; Guérin, Christopher J
2010-12-01
One of the most routine uses of fluorescence microscopy is colocalization, i.e., the demonstration of a relationship between pairs of biological molecules. Frequently this is presented simplistically by the use of overlays of red and green images, with areas of yellow indicating colocalization of the molecules. Colocalization data are rarely quantified and can be misleading. Our results from both synthetic and biological datasets demonstrate that the generation of Pearson's correlation coefficient between pairs of images can overestimate positive correlation and fail to demonstrate negative correlation. We have demonstrated that the calculation of a thresholded Pearson's correlation coefficient using only intensity values over a determined threshold in both channels produces numerical values that more accurately describe both synthetic datasets and biological examples. Its use will bring clarity and accuracy to colocalization studies using fluorescent microscopy.
International Nuclear Information System (INIS)
Calvar, N.; Domínguez, Á.; Macedo, E.A.
2014-01-01
Graphical abstract: - Highlights: • Osmotic coefficients of alcohols with BMpyrDCA ionic liquid are determined. • Experimental data were correlated with Extended Pitzer model of Archer and MNRTL. • Mean molal activity coefficients and excess Gibbs free energies were calculated. • The results have been interpreted in terms of interactions. - Abstract: The vapour pressure osmometry technique (VPO) has been used to obtain the osmotic coefficients of the binary mixtures of the primary and secondary alcohols 1-propanol, 2-propanol, 1-butanol, 2-butanol and 1-pentanol with the ionic liquid 1-butyl-1-methylpyrrolidinium dicyanamide, BMpyrDCA. From these coefficients, the corresponding activity coefficients and vapour pressures of the mixtures have been also determined. The results have been discussed in terms of solute–solvent and ion–ion interactions and have been compared with those taken from literature in order to analyse the influence of the anion or cation constituting the ionic liquid. For the treatment of the experimental data, the Extended Pitzer model of Archer and the MNRTL model have been applied, obtaining standard deviations from the experimental osmotic coefficients lower than 0.015 and 0.065, respectively. From the parameters obtained with the Extended Pitzer model or Archer, the mean molal activity coefficients and the excess Gibbs free energy for the studied mixtures have been calculated
Three dimensional winds: A maximum cross-correlation application to elastic lidar data
Energy Technology Data Exchange (ETDEWEB)
Buttler, William Tillman [Univ. of Texas, Austin, TX (United States)
1996-05-01
Maximum cross-correlation techniques have been used with satellite data to estimate winds and sea surface velocities for several years. Los Alamos National Laboratory (LANL) is currently using a variation of the basic maximum cross-correlation technique, coupled with a deterministic application of a vector median filter, to measure transverse winds as a function of range and altitude from incoherent elastic backscatter lidar (light detection and ranging) data taken throughout large volumes within the atmospheric boundary layer. Hourly representations of three-dimensional wind fields, derived from elastic lidar data taken during an air-quality study performed in a region of complex terrain near Sunland Park, New Mexico, are presented and compared with results from an Environmental Protection Agency (EPA) approved laser doppler velocimeter. The wind fields showed persistent large scale eddies as well as general terrain-following winds in the Rio Grande valley.
International Nuclear Information System (INIS)
Fiebig, H. Rudolf
2002-01-01
We study various aspects of extracting spectral information from time correlation functions of lattice QCD by means of Bayesian inference with an entropic prior, the maximum entropy method (MEM). Correlator functions of a heavy-light meson-meson system serve as a repository for lattice data with diverse statistical quality. Attention is given to spectral mass density functions, inferred from the data, and their dependence on the parameters of the MEM. We propose to employ simulated annealing, or cooling, to solve the Bayesian inference problem, and discuss the practical issues of the approach
Directory of Open Access Journals (Sweden)
GM Mohsin
2017-06-01
Full Text Available Genetic variability, correlation and path coefficient were studied for yield and yield component traits in twenty one diverse genotypes of pumpkin. Highest genotypic coefficient of variation was recorded for fruit length (cm, single fruit weight (kg, Brix (% and yield per plant (kg. Heritability estimates in broad sense were higher for almost all the characters. The characters namely, fruit length, single fruit weight, yield per plant and brix% had high genotypic coefficient of variation coupled with heritability gave high genetic advance expressed as percentage of mean ranged from 76.84 to 96.06 which indicated that these characters were less influenced by environment confirming additive gene action, and therefore, selection of these characters would be more effective for yield improvement of pumpkins. Total six traits likely fruit length, fruit diameter, flesh thickness, single fruit weight and number of fruits per plant were positively and significantly associated with yield per plant. Path coefficient analysis also revealed maximum contribution of single fruit weight (0.869 to yield and this was followed by the contribution of number of fruit per plant (0.527 at genotypic level.
Gao, J.; Lythe, M. B.
1996-06-01
This paper presents the principle of the Maximum Cross-Correlation (MCC) approach in detecting translational motions within dynamic fields from time-sequential remotely sensed images. A C program implementing the approach is presented and illustrated in a flowchart. The program is tested with a pair of sea-surface temperature images derived from Advanced Very High Resolution Radiometer (AVHRR) images near East Cape, New Zealand. Results show that the mean currents in the region have been detected satisfactorily with the approach.
Directory of Open Access Journals (Sweden)
Serge B. Provost
2015-07-01
Full Text Available This paper provides a simplified representation of the exact density function of R, the sample correlation coefficient. The odd and even moments of R are also obtained in closed forms. Being expressed in terms of generalized hypergeometric functions, the resulting representations are readily computable. Some numerical examples corroborate the validity of the results derived herein.
The relation between Pearson’s correlation coefficient r and Salton’s cosine measure
Egghe, L.; Leydesdorff, L.
2009-01-01
The relation between Pearson's correlation coefficient and Salton's cosine measure is revealed based on the different possible values of the division of the L1-norm and the L2-norm of a vector. These different values yield a sheaf of increasingly straight lines which together form a cloud of points,
Raykov, Tenko
2011-01-01
Interval estimation of intraclass correlation coefficients in hierarchical designs is discussed within a latent variable modeling framework. A method accomplishing this aim is outlined, which is applicable in two-level studies where participants (or generally lower-order units) are clustered within higher-order units. The procedure can also be…
A simple approximation to the bivariate normal distribution with large correlation coefficient
Albers, Willem/Wim; Kallenberg, W.C.M.
1994-01-01
The bivariate normal distribution function is approximated with emphasis on situations where the correlation coefficient is large. The high accuracy of the approximation is illustrated by numerical examples. Moreover, exact upper and lower bounds are presented as well as asymptotic results on the
Sample Size Calculation for Estimating or Testing a Nonzero Squared Multiple Correlation Coefficient
Krishnamoorthy, K.; Xia, Yanping
2008-01-01
The problems of hypothesis testing and interval estimation of the squared multiple correlation coefficient of a multivariate normal distribution are considered. It is shown that available one-sided tests are uniformly most powerful, and the one-sided confidence intervals are uniformly most accurate. An exact method of calculating sample size to…
Strong Solar Control of Infrared Aurora on Jupiter: Correlation Since the Last Solar Maximum
Kostiuk, T.; Livengood, T. A.; Hewagama, T.
2009-01-01
Polar aurorae in Jupiter's atmosphere radiate throughout the electromagnetic spectrum from X ray through mid-infrared (mid-IR, 5 - 20 micron wavelength). Voyager IRIS data and ground-based spectroscopic measurements of Jupiter's northern mid-IR aurora, acquired since 1982, reveal a correlation between auroral brightness and solar activity that has not been observed in Jovian aurora at other wavelengths. Over nearly three solar cycles, Jupiter auroral ethane emission brightness and solar 10.7 cm radio flux and sunspot number are positively correlated with high confidence. Ethane line emission intensity varies over tenfold between low and high solar activity periods. Detailed measurements have been made using the GSFC HIPWAC spectrometer at the NASA IRTF since the last solar maximum, following the mid-IR emission through the declining phase toward solar minimum. An even more convincing correlation with solar activity is evident in these data. Current analyses of these results will be described, including planned measurements on polar ethane line emission scheduled through the rise of the next solar maximum beginning in 2009, with a steep gradient to a maximum in 2012. This work is relevant to the Juno mission and to the development of the Europa Jupiter System Mission. Results of observations at the Infrared Telescope Facility (IRTF) operated by the University of Hawaii under Cooperative Agreement no. NCC5-538 with the National Aeronautics and Space Administration, Science Mission Directorate, Planetary Astronomy Program. This work was supported by the NASA Planetary Astronomy Program.
Roth, Philip L; Le, Huy; Oh, In-Sue; Van Iddekinge, Chad H; Bobko, Philip
2018-06-01
Meta-analysis has become a well-accepted method for synthesizing empirical research about a given phenomenon. Many meta-analyses focus on synthesizing correlations across primary studies, but some primary studies do not report correlations. Peterson and Brown (2005) suggested that researchers could use standardized regression weights (i.e., beta coefficients) to impute missing correlations. Indeed, their beta estimation procedures (BEPs) have been used in meta-analyses in a wide variety of fields. In this study, the authors evaluated the accuracy of BEPs in meta-analysis. We first examined how use of BEPs might affect results from a published meta-analysis. We then developed a series of Monte Carlo simulations that systematically compared the use of existing correlations (that were not missing) to data sets that incorporated BEPs (that impute missing correlations from corresponding beta coefficients). These simulations estimated ρ̄ (mean population correlation) and SDρ (true standard deviation) across a variety of meta-analytic conditions. Results from both the existing meta-analysis and the Monte Carlo simulations revealed that BEPs were associated with potentially large biases when estimating ρ̄ and even larger biases when estimating SDρ. Using only existing correlations often substantially outperformed use of BEPs and virtually never performed worse than BEPs. Overall, the authors urge a return to the standard practice of using only existing correlations in meta-analysis. (PsycINFO Database Record (c) 2018 APA, all rights reserved).
Evaluation of icing drag coefficient correlations applied to iced propeller performance prediction
Miller, Thomas L.; Shaw, R. J.; Korkan, K. D.
1987-01-01
Evaluation of three empirical icing drag coefficient correlations is accomplished through application to a set of propeller icing data. The various correlations represent the best means currently available for relating drag rise to various flight and atmospheric conditions for both fixed-wing and rotating airfoils, and the work presented here ilustrates and evaluates one such application of the latter case. The origins of each of the correlations are discussed, and their apparent capabilities and limitations are summarized. These correlations have been made to be an integral part of a computer code, ICEPERF, which has been designed to calculate iced propeller performance. Comparison with experimental propeller icing data shows generally good agreement, with the quality of the predicted results seen to be directly related to the radial icing extent of each case. The code's capability to properly predict thrust coefficient, power coefficient, and propeller efficiency is shown to be strongly dependent on the choice of correlation selected, as well as upon proper specificatioon of radial icing extent.
A new maximum likelihood blood velocity estimator incorporating spatial and temporal correlation
DEFF Research Database (Denmark)
Schlaikjer, Malene; Jensen, Jørgen Arendt
2001-01-01
and space. This paper presents a new estimator (STC-MLE), which incorporates the correlation property. It is an expansion of the maximum likelihood estimator (MLE) developed by Ferrara et al. With the MLE a cross-correlation analysis between consecutive RF-lines on complex form is carried out for a range...... of possible velocities. In the new estimator an additional similarity investigation for each evaluated velocity and the available velocity estimates in a temporal (between frames) and spatial (within frames) neighborhood is performed. An a priori probability density term in the distribution...... of the observations gives a probability measure of the correlation between the velocities. Both the MLE and the STC-MLE have been evaluated on simulated and in-vivo RF-data obtained from the carotid artery. Using the MLE 4.1% of the estimates deviate significantly from the true velocities, when the performance...
International Nuclear Information System (INIS)
Picanco, Marco Antonio Silva; Bandarra Filho, Enio Pedone; Passos, Julio Cesar
2006-01-01
Two-phase flow heat transfer has been exhaustively studied over recent years. However, in this field several questions remain unanswered. Heat transfer coefficient prediction related to nucleate and convective boiling have been studied using different approaches, numerical, analytical and experimental. In this work, an experimental analysis, data representation and heat transfer coefficient prediction on two-phase heat transfer on nucleate and convective boiling are presented. An empirical correlation is obtained based on genetic algorithms search engine over a dimensional analysis of the two-phase flow heat transfer problem. (author)
Shojaeefard, Mohammad Hasan; Khalkhali, Abolfazl; Yarmohammadisatri, Sadegh
2017-06-01
The main purpose of this paper is to propose a new method for designing Macpherson suspension, based on the Sobol indices in terms of Pearson correlation which determines the importance of each member on the behaviour of vehicle suspension. The formulation of dynamic analysis of Macpherson suspension system is developed using the suspension members as the modified links in order to achieve the desired kinematic behaviour. The mechanical system is replaced with an equivalent constrained links and then kinematic laws are utilised to obtain a new modified geometry of Macpherson suspension. The equivalent mechanism of Macpherson suspension increased the speed of analysis and reduced its complexity. The ADAMS/CAR software is utilised to simulate a full vehicle, Renault Logan car, in order to analyse the accuracy of modified geometry model. An experimental 4-poster test rig is considered for validating both ADAMS/CAR simulation and analytical geometry model. Pearson correlation coefficient is applied to analyse the sensitivity of each suspension member according to vehicle objective functions such as sprung mass acceleration, etc. Besides this matter, the estimation of Pearson correlation coefficient between variables is analysed in this method. It is understood that the Pearson correlation coefficient is an efficient method for analysing the vehicle suspension which leads to a better design of Macpherson suspension system.
Cluster structure in the correlation coefficient matrix can be characterized by abnormal eigenvalues
Nie, Chun-Xiao
2018-02-01
In a large number of previous studies, the researchers found that some of the eigenvalues of the financial correlation matrix were greater than the predicted values of the random matrix theory (RMT). Here, we call these eigenvalues as abnormal eigenvalues. In order to reveal the hidden meaning of these abnormal eigenvalues, we study the toy model with cluster structure and find that these eigenvalues are related to the cluster structure of the correlation coefficient matrix. In this paper, model-based experiments show that in most cases, the number of abnormal eigenvalues of the correlation matrix is equal to the number of clusters. In addition, empirical studies show that the sum of the abnormal eigenvalues is related to the clarity of the cluster structure and is negatively correlated with the correlation dimension.
Threshold network of a financial market using the P-value of correlation coefficients
Ha, Gyeong-Gyun; Lee, Jae Woo; Nobi, Ashadun
2015-06-01
Threshold methods in financial networks are important tools for obtaining important information about the financial state of a market. Previously, absolute thresholds of correlation coefficients have been used; however, they have no relation to the length of time. We assign a threshold value depending on the size of the time window by using the P-value concept of statistics. We construct a threshold network (TN) at the same threshold value for two different time window sizes in the Korean Composite Stock Price Index (KOSPI). We measure network properties, such as the edge density, clustering coefficient, assortativity coefficient, and modularity. We determine that a significant difference exists between the network properties of the two time windows at the same threshold, especially during crises. This implies that the market information depends on the length of the time window when constructing the TN. We apply the same technique to Standard and Poor's 500 (S&P500) and observe similar results.
Thermal expansion coefficient determination of polylactic acid using digital image correlation
Botean, Adrian-Ioan
2018-02-01
This paper aims determining the linear thermal expansion coefficient (CTE) of polylactic acid (PLA) using an optical method for measuring deformations called digital image correlation method (DIC). Because PLA is often used in making many pieces with 3D printing technology, it is opportune to know this coefficient to obtain a higher degree of precision in the construction of parts and to monitor deformations when these parts are subjected to a thermal gradient. Are used two PLA discs with 20 and 40% degree of filling. In parallel with this approach was determined the linear thermal expansion coefficient (CTE) for the copper cylinder on the surface of which are placed the two discs of PLA.
Thermal expansion coefficient determination of polylactic acid using digital image correlation
Directory of Open Access Journals (Sweden)
Botean Adrian - Ioan
2018-01-01
Full Text Available This paper aims determining the linear thermal expansion coefficient (CTE of polylactic acid (PLA using an optical method for measuring deformations called digital image correlation method (DIC. Because PLA is often used in making many pieces with 3D printing technology, it is opportune to know this coefficient to obtain a higher degree of precision in the construction of parts and to monitor deformations when these parts are subjected to a thermal gradient. Are used two PLA discs with 20 and 40% degree of filling. In parallel with this approach was determined the linear thermal expansion coefficient (CTE for the copper cylinder on the surface of which are placed the two discs of PLA.
Determination and correlation of mass transfer coefficients in a stirred cell
International Nuclear Information System (INIS)
Herranz, J.; Bloxom, S.R.; Keeler, J.B.; Roth, S.R.
1975-01-01
In the proposed Molten Salt Breeder Reactor flowsheet, a fraction of the rare earth fission products is removed from the fuel salt in mass transfer cells. To obtain design parameters for this extraction, the effect of cell size, blade diameter, phase volume, and agitation rate on the mass transfer for a high density ratio system (mercury/water) in nondispersing square cross section contactors was determined. Aqueous side mass transfer coefficients were measured by polarography over a wide range of operating conditions. Correlations for the experimental mass transfer coefficients as functions of the operating parameters are presented. Several techniques for measuring mercury-side mass transfer coefficients were evaluated and a new one is recommended
Ma, Rubao; Xu, Weichao; Zhang, Yun; Ye, Zhongfu
2014-01-01
This paper investigates the robustness properties of Pearson's rank-variate correlation coefficient (PRVCC) in scenarios where one channel is corrupted by impulsive noise and the other is impulsive noise-free. As shown in our previous work, these scenarios that frequently encountered in radar and/or sonar, can be well emulated by a particular bivariate contaminated Gaussian model (CGM). Under this CGM, we establish the asymptotic closed forms of the expectation and variance of PRVCC by means of the well known Delta method. To gain a deeper understanding, we also compare PRVCC with two other classical correlation coefficients, i.e., Spearman's rho (SR) and Kendall's tau (KT), in terms of the root mean squared error (RMSE). Monte Carlo simulations not only verify our theoretical findings, but also reveal the advantage of PRVCC by an example of estimating the time delay in the particular impulsive noise environment.
Ahlgren, P.; Jarneving, B.; ROUSSEAU, Ronald
2003-01-01
Author cocitation analysis (ACA), a special type of cocitation analysis, was introduced by White and Griffith in 1981. This technique is used to analyze the intellectual structure of a given scientific field. In 1990, McCain published a technical overview that has been largely adopted as a standard. Here, McCain notes that Pearson's correlation coefficient (Pearson's r) is often used as a similarity measure in ACA and presents some advantages of its use. The present article criticizes the use...
The relation between Pearson’s correlation coefficient r and Salton’s cosine measure
EGGHE, Leo; Leydesdorff, L.
2009-01-01
The relation between Pearson’s correlation coefficient and Salton’s cosine measure is revealed based on the different possible values of the division of the -norm and the norm of a vector. These different values yield a sheaf of increasingly straight lines which form together a cloud of points, being the investigated relation. These theoretical results are tested against the author co-citation relations among 24 informetricians for who two matrices can be constructed, based on co-citations: t...
Generalized Correlation Coefficient for Non-Parametric Analysis of Microarray Time-Course Data.
Tan, Qihua; Thomassen, Mads; Burton, Mark; Mose, Kristian Fredløv; Andersen, Klaus Ejner; Hjelmborg, Jacob; Kruse, Torben
2017-06-06
Modeling complex time-course patterns is a challenging issue in microarray study due to complex gene expression patterns in response to the time-course experiment. We introduce the generalized correlation coefficient and propose a combinatory approach for detecting, testing and clustering the heterogeneous time-course gene expression patterns. Application of the method identified nonlinear time-course patterns in high agreement with parametric analysis. We conclude that the non-parametric nature in the generalized correlation analysis could be an useful and efficient tool for analyzing microarray time-course data and for exploring the complex relationships in the omics data for studying their association with disease and health.
Ground reaction force analysed with correlation coefficient matrix in group of stroke patients.
Szczerbik, Ewa; Krawczyk, Maciej; Syczewska, Małgorzata
2014-01-01
Stroke is the third cause of death in contemporary society and causes many disorders. Clinical scales, ground reaction force (GRF) and objective gait analysis are used for assessment of patient's rehabilitation progress during treatment. The goal of this paper is to assess whether signal correlation coefficient matrix applied to GRF can be used for evaluation of the status of post-stroke patients. A group of patients underwent clinical assessment and instrumented gait analysis simultaneously three times. The difference between components of patient's GRF (vertical, fore/aft, med/lat) and normal ones (reference GRF of healthy subjects) was calculated as correlation coefficient. Patients were divided into two groups ("worse" and "better") based on the clinical functional scale tests done at the beginning of rehabilitation process. The results obtained by these two groups were compared using statistical analysis. An increase of median value of correlation coefficient is observed in all components of GRF, but only in non-paretic leg. Analysis of GRF signal can be helpful in assessment of post-stroke patients during rehabilitation. Improvement in stroke patients was observed in non-paretic leg of the "worse" group. GRF analysis should not be the only tool for objective validation of patient's improvement, but could be used as additional source of information.
Mikuni, Shintaro; Yamamoto, Johtaro; Horio, Takashi; Kinjo, Masataka
2017-08-25
The glucocorticoid receptor (GR) is a transcription factor, which interacts with DNA and other cofactors to regulate gene transcription. Binding to other partners in the cell nucleus alters the diffusion properties of GR. Raster image correlation spectroscopy (RICS) was applied to quantitatively characterize the diffusion properties of EGFP labeled human GR (EGFP-hGR) and its mutants in the cell nucleus. RICS is an image correlation technique that evaluates the spatial distribution of the diffusion coefficient as a diffusion map. Interestingly, we observed that the averaged diffusion coefficient of EGFP-hGR strongly and negatively correlated with its transcriptional activities in comparison to that of EGFP-hGR wild type and mutants with various transcriptional activities. This result suggests that the decreasing of the diffusion coefficient of hGR was reflected in the high-affinity binding to DNA. Moreover, the hyper-phosphorylation of hGR can enhance the transcriptional activity by reduction of the interaction between the hGR and the nuclear corepressors.
DEFF Research Database (Denmark)
Edjabou, Maklawe Essonanawe; Martín-Fernández, Josep Antoni; Scheutz, Charlotte
2017-01-01
-derived food waste amounted to 2.21 ± 3.12% with a confidence interval of (−4.03; 8.45), which highlights the problem of the biased negative proportions. A Pearson’s correlation test, applied to waste fraction generation (kg mass), indicated a positive correlation between avoidable vegetable food waste...... and plastic packaging. However, correlation tests applied to waste fraction compositions (percentage values) showed a negative association in this regard, thus demonstrating that statistical analyses applied to compositional waste fraction data, without addressing the closed characteristics of these data......, have the potential to generate spurious or misleading results. Therefore, ¨compositional data should be transformed adequately prior to any statistical analysis, such as computing mean, standard deviation and correlation coefficients....
Directory of Open Access Journals (Sweden)
Fátima Faní Fitz
Full Text Available Summary Introduction: Digital palpation and manometry are methods that can provide information regarding maximum voluntary contraction (MVC and endurance of the pelvic floor muscles (PFM, and a strong correlation between these variables can be expected. Objective: To investigate the correlation between MVC and endurance, measured by digital palpation and manometry. Method: Forty-two women, with mean age of 58.1 years (±10.2, and predominant symptoms of stress urinary incontinence (SUI, were included. Examination was firstly conducted by digital palpation and subsequently using a Peritron manometer. MVC was measured using a 0-5 score, based on the Oxford Grading Scale. Endurance was assessed based on the PERFECT scheme. Results: We found a significant positive correlation between the MVC measured by digital palpation and the peak manometric pressure (r=0.579, p<0.001, and between the measurements of the endurance by Peritron manometer and the PERFECT assessment scheme (r=0.559, P<0.001. Conclusion: Our results revealed a positive and significant correlation between the capacity and maintenance of PFM contraction using digital and manometer evaluations in women with predominant symptoms of SUI.
Discrete Maximum Principle for a 1D Problem with Piecewise-Constant Coefficients Solved by hp-FEM
Czech Academy of Sciences Publication Activity Database
Vejchodský, Tomáš; Šolín, Pavel
2007-01-01
Roč. 15, č. 3 (2007), s. 233-243 ISSN 1570-2820 R&D Projects: GA ČR GP201/04/P021; GA ČR GA102/05/0629 Institutional research plan: CEZ:AV0Z10190503; CEZ:AV0Z20570509 Keywords : discrete maximum principle * hp-FEM * Poisson equation Subject RIV: BA - General Mathematics
Ma, Chuang; Wang, Xiangfeng
2012-09-01
One of the computational challenges in plant systems biology is to accurately infer transcriptional regulation relationships based on correlation analyses of gene expression patterns. Despite several correlation methods that are applied in biology to analyze microarray data, concerns regarding the compatibility of these methods with the gene expression data profiled by high-throughput RNA transcriptome sequencing (RNA-Seq) technology have been raised. These concerns are mainly due to the fact that the distribution of read counts in RNA-Seq experiments is different from that of fluorescence intensities in microarray experiments. Therefore, a comprehensive evaluation of the existing correlation methods and, if necessary, introduction of novel methods into biology is appropriate. In this study, we compared four existing correlation methods used in microarray analysis and one novel method called the Gini correlation coefficient on previously published microarray-based and sequencing-based gene expression data in Arabidopsis (Arabidopsis thaliana) and maize (Zea mays). The comparisons were performed on more than 11,000 regulatory relationships in Arabidopsis, including 8,929 pairs of transcription factors and target genes. Our analyses pinpointed the strengths and weaknesses of each method and indicated that the Gini correlation can compensate for the shortcomings of the Pearson correlation, the Spearman correlation, the Kendall correlation, and the Tukey's biweight correlation. The Gini correlation method, with the other four evaluated methods in this study, was implemented as an R package named rsgcc that can be utilized as an alternative option for biologists to perform clustering analyses of gene expression patterns or transcriptional network analyses.
Ma, Chuang; Wang, Xiangfeng
2012-01-01
One of the computational challenges in plant systems biology is to accurately infer transcriptional regulation relationships based on correlation analyses of gene expression patterns. Despite several correlation methods that are applied in biology to analyze microarray data, concerns regarding the compatibility of these methods with the gene expression data profiled by high-throughput RNA transcriptome sequencing (RNA-Seq) technology have been raised. These concerns are mainly due to the fact that the distribution of read counts in RNA-Seq experiments is different from that of fluorescence intensities in microarray experiments. Therefore, a comprehensive evaluation of the existing correlation methods and, if necessary, introduction of novel methods into biology is appropriate. In this study, we compared four existing correlation methods used in microarray analysis and one novel method called the Gini correlation coefficient on previously published microarray-based and sequencing-based gene expression data in Arabidopsis (Arabidopsis thaliana) and maize (Zea mays). The comparisons were performed on more than 11,000 regulatory relationships in Arabidopsis, including 8,929 pairs of transcription factors and target genes. Our analyses pinpointed the strengths and weaknesses of each method and indicated that the Gini correlation can compensate for the shortcomings of the Pearson correlation, the Spearman correlation, the Kendall correlation, and the Tukey’s biweight correlation. The Gini correlation method, with the other four evaluated methods in this study, was implemented as an R package named rsgcc that can be utilized as an alternative option for biologists to perform clustering analyses of gene expression patterns or transcriptional network analyses. PMID:22797655
Energy Technology Data Exchange (ETDEWEB)
Žerovnik, Gašper, E-mail: gasper.zerovnik@ijs.si [Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Trkov, Andrej, E-mail: andrej.trkov@ijs.si [Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Smith, Donald L., E-mail: donald.l.smith@anl.gov [Argonne National Laboratory, 1710 Avenida del Mundo, Coronado, CA 92118-3073 (United States); Capote, Roberto, E-mail: roberto.capotenoy@iaea.org [NAPC–Nuclear Data Section, International Atomic Energy Agency, PO Box 100, Vienna-A-1400 (Austria)
2013-11-01
Inherently positive parameters with large relative uncertainties (typically ≳30%) are often considered to be governed by the lognormal distribution. This assumption has the practical benefit of avoiding the possibility of sampling negative values in stochastic applications. Furthermore, it is typically assumed that the correlation coefficients for comparable multivariate normal and lognormal distributions are equivalent. However, this ideal situation is approached only in the linear approximation which happens to be applicable just for small uncertainties. This paper derives and discusses the proper transformation of correlation coefficients between both distributions for the most general case which is applicable for arbitrary uncertainties. It is seen that for lognormal distributions with large relative uncertainties strong anti-correlations (negative correlations) are mathematically forbidden. This is due to the asymmetry that is an inherent feature of these distributions. Some implications of these results for practical nuclear applications are discussed and they are illustrated with examples in this paper. Finally, modifications to the ENDF-6 format used for representing uncertainties in evaluated nuclear data libraries are suggested, as needed to deal with this issue.
Chen, Lihua; Liu, Min; Bao, Jing; Xia, Yunbao; Zhang, Jiuquan; Zhang, Lin; Huang, Xuequan; Wang, Jian
2013-01-01
To perform a meta-analysis exploring the correlation between the apparent diffusion coefficient (ADC) and tumor cellularity in patients. We searched medical and scientific literature databases for studies discussing the correlation between the ADC and tumor cellularity in patients. Only studies that were published in English or Chinese prior to November 2012 were considered for inclusion. Summary correlation coefficient (r) values were extracted from each study, and 95% confidence intervals (CIs) were calculated. Sensitivity and subgroup analyses were performed to investigate potential heterogeneity. Of 189 studies, 28 were included in the meta-analysis, comprising 729 patients. The pooled r for all studies was -0.57 (95% CI: -0.62, -0.52), indicating notable heterogeneity (Pcorrelation between the ADC and cellularity for brain tumors. There was no notable evidence of publication bias. There is a strong negative correlation between the ADC and tumor cellularity in patients, particularly in the brain. However, larger, prospective studies are warranted to validate these findings in other cancer types.
International Nuclear Information System (INIS)
Žerovnik, Gašper; Trkov, Andrej; Smith, Donald L.; Capote, Roberto
2013-01-01
Inherently positive parameters with large relative uncertainties (typically ≳30%) are often considered to be governed by the lognormal distribution. This assumption has the practical benefit of avoiding the possibility of sampling negative values in stochastic applications. Furthermore, it is typically assumed that the correlation coefficients for comparable multivariate normal and lognormal distributions are equivalent. However, this ideal situation is approached only in the linear approximation which happens to be applicable just for small uncertainties. This paper derives and discusses the proper transformation of correlation coefficients between both distributions for the most general case which is applicable for arbitrary uncertainties. It is seen that for lognormal distributions with large relative uncertainties strong anti-correlations (negative correlations) are mathematically forbidden. This is due to the asymmetry that is an inherent feature of these distributions. Some implications of these results for practical nuclear applications are discussed and they are illustrated with examples in this paper. Finally, modifications to the ENDF-6 format used for representing uncertainties in evaluated nuclear data libraries are suggested, as needed to deal with this issue
Research on the Fusion of Dependent Evidence Based on Rank Correlation Coefficient
Directory of Open Access Journals (Sweden)
Fengjian Shi
2017-10-01
Full Text Available In order to meet the higher accuracy and system reliability requirements, the information fusion for multi-sensor systems is an increasing concern. Dempster–Shafer evidence theory (D–S theory has been investigated for many applications in multi-sensor information fusion due to its flexibility in uncertainty modeling. However, classical evidence theory assumes that the evidence is independent of each other, which is often unrealistic. Ignoring the relationship between the evidence may lead to unreasonable fusion results, and even lead to wrong decisions. This assumption severely prevents D–S evidence theory from practical application and further development. In this paper, an innovative evidence fusion model to deal with dependent evidence based on rank correlation coefficient is proposed. The model first uses rank correlation coefficient to measure the dependence degree between different evidence. Then, total discount coefficient is obtained based on the dependence degree, which also considers the impact of the reliability of evidence. Finally, the discount evidence fusion model is presented. An example is illustrated to show the use and effectiveness of the proposed method.
Research on the Fusion of Dependent Evidence Based on Rank Correlation Coefficient.
Shi, Fengjian; Su, Xiaoyan; Qian, Hong; Yang, Ning; Han, Wenhua
2017-10-16
In order to meet the higher accuracy and system reliability requirements, the information fusion for multi-sensor systems is an increasing concern. Dempster-Shafer evidence theory (D-S theory) has been investigated for many applications in multi-sensor information fusion due to its flexibility in uncertainty modeling. However, classical evidence theory assumes that the evidence is independent of each other, which is often unrealistic. Ignoring the relationship between the evidence may lead to unreasonable fusion results, and even lead to wrong decisions. This assumption severely prevents D-S evidence theory from practical application and further development. In this paper, an innovative evidence fusion model to deal with dependent evidence based on rank correlation coefficient is proposed. The model first uses rank correlation coefficient to measure the dependence degree between different evidence. Then, total discount coefficient is obtained based on the dependence degree, which also considers the impact of the reliability of evidence. Finally, the discount evidence fusion model is presented. An example is illustrated to show the use and effectiveness of the proposed method.
Liu, Jian; Miller, William H
2008-09-28
The maximum entropy analytic continuation (MEAC) method is used to extend the range of accuracy of the linearized semiclassical initial value representation (LSC-IVR)/classical Wigner approximation for real time correlation functions. LSC-IVR provides a very effective "prior" for the MEAC procedure since it is very good for short times, exact for all time and temperature for harmonic potentials (even for correlation functions of nonlinear operators), and becomes exact in the classical high temperature limit. This combined MEAC+LSC/IVR approach is applied here to two highly nonlinear dynamical systems, a pure quartic potential in one dimensional and liquid para-hydrogen at two thermal state points (25 and 14 K under nearly zero external pressure). The former example shows the MEAC procedure to be a very significant enhancement of the LSC-IVR for correlation functions of both linear and nonlinear operators, and especially at low temperature where semiclassical approximations are least accurate. For liquid para-hydrogen, the LSC-IVR is seen already to be excellent at T=25 K, but the MEAC procedure produces a significant correction at the lower temperature (T=14 K). Comparisons are also made as to how the MEAC procedure is able to provide corrections for other trajectory-based dynamical approximations when used as priors.
Zhao, Yu Xi; Xie, Ping; Sang, Yan Fang; Wu, Zi Yi
2018-04-01
Hydrological process evaluation is temporal dependent. Hydrological time series including dependence components do not meet the data consistency assumption for hydrological computation. Both of those factors cause great difficulty for water researches. Given the existence of hydrological dependence variability, we proposed a correlationcoefficient-based method for significance evaluation of hydrological dependence based on auto-regression model. By calculating the correlation coefficient between the original series and its dependence component and selecting reasonable thresholds of correlation coefficient, this method divided significance degree of dependence into no variability, weak variability, mid variability, strong variability, and drastic variability. By deducing the relationship between correlation coefficient and auto-correlation coefficient in each order of series, we found that the correlation coefficient was mainly determined by the magnitude of auto-correlation coefficient from the 1 order to p order, which clarified the theoretical basis of this method. With the first-order and second-order auto-regression models as examples, the reasonability of the deduced formula was verified through Monte-Carlo experiments to classify the relationship between correlation coefficient and auto-correlation coefficient. This method was used to analyze three observed hydrological time series. The results indicated the coexistence of stochastic and dependence characteristics in hydrological process.
Comparison of values of Pearson’s and Spearman’s correlation coefficient on the same sets of data
Hauke, Jan; Kossowski, Tomasz
2011-01-01
Spearman’s rank correlation coefficient is a nonparametric (distribution-free) rank statistic proposed by Charles Spearman as a measure of the strength of an association between two variables. It is a measure of a monotone association that is used when the distribution of data makes Pearson’s correlation coefficient undesirable or misleading. Spearman’s coefficient is not a measure of the linear relationship between two variables, as some “statisticians” declare. It assesses how well an arbit...
SPSS and SAS programs for comparing Pearson correlations and OLS regression coefficients.
Weaver, Bruce; Wuensch, Karl L
2013-09-01
Several procedures that use summary data to test hypotheses about Pearson correlations and ordinary least squares regression coefficients have been described in various books and articles. To our knowledge, however, no single resource describes all of the most common tests. Furthermore, many of these tests have not yet been implemented in popular statistical software packages such as SPSS and SAS. In this article, we describe all of the most common tests and provide SPSS and SAS programs to perform them. When they are applicable, our code also computes 100 × (1 - α)% confidence intervals corresponding to the tests. For testing hypotheses about independent regression coefficients, we demonstrate one method that uses summary data and another that uses raw data (i.e., Potthoff analysis). When the raw data are available, the latter method is preferred, because use of summary data entails some loss of precision due to rounding.
Determination of maximum physiologic thyroid uptake and correlation with 24-hour RAI uptake value
International Nuclear Information System (INIS)
Duldulao, M.; Obaldo, J.
2007-01-01
Full text: In hyperthyroid patients, thyroid uptake values are overestimated, sometimes approaching or exceeding 100%. This is physiologically and mathematically impossible. This study was undertaken to determine the maximum physiologic thyroid uptake value through a proposed simple method using a gamma camera. Methodology: Twenty-two patients (17 females and 5 males), with ages ranging from 19-61 y/o (mean age ± SD; 41 ± 12), with 24-hour uptake value of >50%, clinically hyperthyroid and referred for subsequent radioactive iodine therapy were studied. The computed maximum physiologic thyroid uptake was compared with the 24-hour uptake using the paired Student t-test and evaluated using linear regression analysis. Results: The computed physiologic uptake correlated poorly with the 24-hour uptake value. However, in the male subgroup, there was no statistically significant difference between the two (p=0.77). Linear regression analysis gives the following relationship: physiologic uptake (%) = 77.76 - 0.284 (24-hour RAI uptake value). Conclusion: Provided that proper regions of interest are applied with correct attenuation and background subtraction, determination of physiologic thyroid uptake may be obtained using the proposed method. This simple method may be useful prior to I-131 therapy for hyperthyroidism especially when a single uptake determination is performed. (author)
Aliya, F; Begum, H; Reddy, M T; Sivaraj, N; Pandravada, S R; Narshimulu, G
2014-05-01
Fifty genotypes of spine gourd (Momordica dioica Roxb.) were evaluated in a randomized block design with two replications at the Vegetable Research Station, Rajendranagar, Hyderabad, Andhra Pradesh, India during kharif, 2012. Correlation and path coefficient analysis were carried out to study the character association and contribution, respectively for twelve quantitative characters namely vine length (m), number of stems per plant, days to first female flower appearance, first female flowering node, days to first fruit harvest, days to last fruit harvest, fruiting period (days), fruit length (cm), fruit width (cm), fruit weight (g), number of fruits per plant and fruit yield per plant (kg) for identification of the potential selection indices. Correlation and path coefficient analyses revealed that fruiting period and number of fruits per plant not only had positively significant correlation with fruit yield but also had positively high direct effect on it and are regarded as the main determinants of fruit yield. Days to first fruit harvest had positively moderate direct effect on fruit yield and its association was negatively significant, days to last fruit harvest had negatively high direct effect on fruit yield and its association was significant positively, hence restricted simultaneous selection can be made for days to first fruit harvest and days to last fruit harvest. The improvement in fruit yield can be effective if selection is based on days to first fruit harvest, days to last fruit harvest, fruiting period and number of fruits per plant.
Correlation coefficient based supervised locally linear embedding for pulmonary nodule recognition.
Wu, Panpan; Xia, Kewen; Yu, Hengyong
2016-11-01
Dimensionality reduction techniques are developed to suppress the negative effects of high dimensional feature space of lung CT images on classification performance in computer aided detection (CAD) systems for pulmonary nodule detection. An improved supervised locally linear embedding (SLLE) algorithm is proposed based on the concept of correlation coefficient. The Spearman's rank correlation coefficient is introduced to adjust the distance metric in the SLLE algorithm to ensure that more suitable neighborhood points could be identified, and thus to enhance the discriminating power of embedded data. The proposed Spearman's rank correlation coefficient based SLLE (SC(2)SLLE) is implemented and validated in our pilot CAD system using a clinical dataset collected from the publicly available lung image database consortium and image database resource initiative (LICD-IDRI). Particularly, a representative CAD system for solitary pulmonary nodule detection is designed and implemented. After a sequential medical image processing steps, 64 nodules and 140 non-nodules are extracted, and 34 representative features are calculated. The SC(2)SLLE, as well as SLLE and LLE algorithm, are applied to reduce the dimensionality. Several quantitative measurements are also used to evaluate and compare the performances. Using a 5-fold cross-validation methodology, the proposed algorithm achieves 87.65% accuracy, 79.23% sensitivity, 91.43% specificity, and 8.57% false positive rate, on average. Experimental results indicate that the proposed algorithm outperforms the original locally linear embedding and SLLE coupled with the support vector machine (SVM) classifier. Based on the preliminary results from a limited number of nodules in our dataset, this study demonstrates the great potential to improve the performance of a CAD system for nodule detection using the proposed SC(2)SLLE. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.
On the construction of bivariate exponential distributions with an arbitrary correlation coefficient
DEFF Research Database (Denmark)
Bladt, Mogens; Nielsen, Bo Friis
In this paper we use a concept of multivariate phase-type distributions to define a class of bivariate exponential distributions. This class has the following three appealing properties. Firstly, we may construct a pair of exponentially distributed random variables with any feasible correlation...... coefficient (also negative). Secondly, the class satisfies that any linear combination (projection) of the marginal random variables is a phase {type distributions, The latter property is potentially important for the development hypothesis testing in linear models. Thirdly, it is very easy to simulate...
Feng, Dai; Baumgartner, Richard; Svetnik, Vladimir
2018-04-05
The concordance correlation coefficient (CCC) is a widely used scaled index in the study of agreement. In this article, we propose estimating the CCC by a unified Bayesian framework that can (1) accommodate symmetric or asymmetric and light- or heavy-tailed data; (2) select model from several candidates; and (3) address other issues frequently encountered in practice such as confounding covariates and missing data. The performance of the proposal was studied and demonstrated using simulated as well as real-life biomarker data from a clinical study of an insomnia drug. The implementation of the proposal is accessible through a package in the Comprehensive R Archive Network.
Frontal Face Detection using Haar Wavelet Coefficients and Local Histogram Correlation
Directory of Open Access Journals (Sweden)
Iwan Setyawan
2011-12-01
Full Text Available Face detection is the main building block on which all automatic systems dealing with human faces is built. For example, a face recognition system must rely on face detection to process an input image and determine which areas contain human faces. These areas then become the input for the face recognition system for further processing. This paper presents a face detection system designed to detect frontal faces. The system uses Haar wavelet coefficients and local histogram correlation as differentiating features. Our proposed system is trained using 100 training images. Our experiments show that the proposed system performed well during testing, achieving a detection rate of 91.5%.
Koral, Korgün; Mathis, Derek; Gimi, Barjor; Gargan, Lynn; Weprin, Bradley; Bowers, Daniel C; Margraf, Linda
2013-08-01
To test whether there is correlation between cell densities and apparent diffusion coefficient (ADC) metrics of common pediatric cerebellar tumors. This study was reviewed for issues of patient safety and confidentiality and was approved by the Institutional Review Board of the University of Texas Southwestern Medical Center and was compliant with HIPAA. The need for informed consent was waived. Ninety-five patients who had preoperative magnetic resonance imaging and surgical pathologic findings available between January 2003 and June 2011 were included. There were 37 pilocytic astrocytomas, 34 medulloblastomas (23 classic, eight desmoplastic-nodular, two large cell, one anaplastic), 17 ependymomas (13 World Health Organization [WHO] grade II, four WHO grade III), and seven atypical teratoid rhabdoid tumors. ADCs of solid tumor components and normal cerebellum were measured. Tumor-to-normal brain ADC ratios (hereafter, ADC ratio) were calculated. The medulloblastomas and ependymomas were subcategorized according to the latest WHO classification, and tumor cellularity was calculated. Correlation was sought between cell densities and mean tumor ADCs, minimum tumor ADCs, and ADC ratio. When all tumors were considered together, negative correlation was found between cellularity and mean tumor ADCs (ρ = -0.737, P correlation between cellularity and ADC ratio. Negative correlation was found between cellularity and minimum tumor ADC in atypical teratoid rhabdoid tumors (ρ = -0.786, P correlation was found between cellularity and mean tumor ADC and ADC ratio. There was no correlation between the ADC metrics and cellularity of the pilocytic astrocytomas, medulloblastomas, and ependymomas. Negative correlation was found between cellularity and ADC metrics of common pediatric cerebellar tumors. Although ADC metrics are useful in the preoperative diagnosis of common pediatric cerebellar tumors and this utility is generally attributed to differences in cellularity of tumors
Sun, Xuelian; Liu, Zixian
2016-02-01
In this paper, a new estimator of correlation matrix is proposed, which is composed of the detrended cross-correlation coefficients (DCCA coefficients), to improve portfolio optimization. In contrast to Pearson's correlation coefficients (PCC), DCCA coefficients acquired by the detrended cross-correlation analysis (DCCA) method can describe the nonlinear correlation between assets, and can be decomposed in different time scales. These properties of DCCA make it possible to improve the investment effect and more valuable to investigate the scale behaviors of portfolios. The minimum variance portfolio (MVP) model and the Mean-Variance (MV) model are used to evaluate the effectiveness of this improvement. Stability analysis shows the effect of two kinds of correlation matrices on the estimation error of portfolio weights. The observed scale behaviors are significant to risk management and could be used to optimize the portfolio selection.
Systematic bias of correlation coefficient may explain negative accuracy of genomic prediction.
Zhou, Yao; Vales, M Isabel; Wang, Aoxue; Zhang, Zhiwu
2017-09-01
Accuracy of genomic prediction is commonly calculated as the Pearson correlation coefficient between the predicted and observed phenotypes in the inference population by using cross-validation analysis. More frequently than expected, significant negative accuracies of genomic prediction have been reported in genomic selection studies. These negative values are surprising, given that the minimum value for prediction accuracy should hover around zero when randomly permuted data sets are analyzed. We reviewed the two common approaches for calculating the Pearson correlation and hypothesized that these negative accuracy values reflect potential bias owing to artifacts caused by the mathematical formulas used to calculate prediction accuracy. The first approach, Instant accuracy, calculates correlations for each fold and reports prediction accuracy as the mean of correlations across fold. The other approach, Hold accuracy, predicts all phenotypes in all fold and calculates correlation between the observed and predicted phenotypes at the end of the cross-validation process. Using simulated and real data, we demonstrated that our hypothesis is true. Both approaches are biased downward under certain conditions. The biases become larger when more fold are employed and when the expected accuracy is low. The bias of Instant accuracy can be corrected using a modified formula. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.
Comparison of boiling heat transfer coefficient and pressure drop correlations for evaporators
International Nuclear Information System (INIS)
Eskin, N.; Arslan, G.
2009-01-01
Evaporator design is an important aspect for the HVAC industry. As the demand for more efficient and compact heat exchangers increase, researches on estimation of two-phase flow heat transfer and pressure drop gain importance. Due to complexity of the hydrodynamic and heat transfer of the two-phase flow, there are many experimental studies available for refrigerants int he literature. In this study, a model for boiling heat transfer in a horizontal tube has been developed and the simulation results are compared with experimental ones published in the literature. In these comparisons, heat transfer coefficient is calculated by using Kattan-Thome-Favrat (1998), Shah (1982), Kandilikar (1990), Chaddock and Brunemann (1967) correlations under different operational conditions such as saturation pressure, mass flux, the type of refrigerant and two phase flow pattern. Besides that flow pattern has also been considered in the simulation by using Thome and El Hajal (2002) model. For pressure drop Lockhart-Martinelli (1949), Mueller-Steinhagen-Hack (1986) and Groennerund (1979) correlations are used in simulations. Local vapor quality change at each experimental condition through the model is determined. Roughness is an important parameter for frictional pressure drop. Friction coefficient is determined by using Churchill (1977) model. (author)
Miao, Yonghao; Zhao, Ming; Lin, Jing; Lei, Yaguo
2017-08-01
The extraction of periodic impulses, which are the important indicators of rolling bearing faults, from vibration signals is considerably significance for fault diagnosis. Maximum correlated kurtosis deconvolution (MCKD) developed from minimum entropy deconvolution (MED) has been proven as an efficient tool for enhancing the periodic impulses in the diagnosis of rolling element bearings and gearboxes. However, challenges still exist when MCKD is applied to the bearings operating under harsh working conditions. The difficulties mainly come from the rigorous requires for the multi-input parameters and the complicated resampling process. To overcome these limitations, an improved MCKD (IMCKD) is presented in this paper. The new method estimates the iterative period by calculating the autocorrelation of the envelope signal rather than relies on the provided prior period. Moreover, the iterative period will gradually approach to the true fault period through updating the iterative period after every iterative step. Since IMCKD is unaffected by the impulse signals with the high kurtosis value, the new method selects the maximum kurtosis filtered signal as the final choice from all candidates in the assigned iterative counts. Compared with MCKD, IMCKD has three advantages. First, without considering prior period and the choice of the order of shift, IMCKD is more efficient and has higher robustness. Second, the resampling process is not necessary for IMCKD, which is greatly convenient for the subsequent frequency spectrum analysis and envelope spectrum analysis without resetting the sampling rate. Third, IMCKD has a significant performance advantage in diagnosing the bearing compound-fault which expands the application range. Finally, the effectiveness and superiority of IMCKD are validated by a number of simulated bearing fault signals and applying to compound faults and single fault diagnosis of a locomotive bearing.
A new method of spatio-temporal topographic mapping by correlation coefficient of K-means cluster.
Li, Ling; Yao, Dezhong
2007-01-01
It would be of the utmost interest to map correlated sources in the working human brain by Event-Related Potentials (ERPs). This work is to develop a new method to map correlated neural sources based on the time courses of the scalp ERPs waveforms. The ERP data are classified first by k-means cluster analysis, and then the Correlation Coefficients (CC) between the original data of each electrode channel and the time course of each cluster centroid are calculated and utilized as the mapping variable on the scalp surface. With a normalized 4-concentric-sphere head model with radius 1, the performance of the method is evaluated by simulated data. CC, between simulated four sources (s (1)-s (4)) and the estimated cluster centroids (c (1)-c (4)), and the distances (Ds), between the scalp projection points of the s (1)-s (4) and that of the c (1)-c (4), are utilized as the evaluation indexes. Applied to four sources with two of them partially correlated (with maximum mutual CC = 0.4892), CC (Ds) between s (1)-s (4) and c (1)-c (4) are larger (smaller) than 0.893 (0.108) for noise levels NSRclusters located at left, right occipital and frontal. The estimated vectors of the contra-occipital area demonstrate that attention to the stimulus location produces increased amplitude of the P1 and N1 components over the contra-occipital scalp. The estimated vector in the frontal area displays two large processing negativity waves around 100 ms and 250 ms when subjects are attentive, and there is a small negative wave around 140 ms and a P300 when subjects are unattentive. The results of simulations and real Visual Evoked Potentials (VEPs) data demonstrate the validity of the method in mapping correlated sources. This method may be an objective, heuristic and important tool to study the properties of cerebral, neural networks in cognitive and clinical neurosciences.
Schaefer, Andreas; Wenzel, Friedemann
2017-04-01
Subduction zones are generally the sources of the earthquakes with the highest magnitudes. Not only in Japan or Chile, but also in Pakistan, the Solomon Islands or for the Lesser Antilles, subduction zones pose a significant hazard for the people. To understand the behavior of subduction zones, especially to identify their capabilities to produce maximum magnitude earthquakes, various physical models have been developed leading to a large number of various datasets, e.g. from geodesy, geomagnetics, structural geology, etc. There have been various studies to utilize this data for the compilation of a subduction zone parameters database, but mostly concentrating on only the major zones. Here, we compile the largest dataset of subduction zone parameters both in parameter diversity but also in the number of considered subduction zones. In total, more than 70 individual sources have been assessed and the aforementioned parametric data have been combined with seismological data and many more sources have been compiled leading to more than 60 individual parameters. Not all parameters have been resolved for each zone, since the data completeness depends on the data availability and quality for each source. In addition, the 3D down-dip geometry of a majority of the subduction zones has been resolved using historical earthquake hypocenter data and centroid moment tensors where available and additionally compared and verified with results from previous studies. With such a database, a statistical study has been undertaken to identify not only correlations between those parameters to estimate a parametric driven way to identify potentials for maximum possible magnitudes, but also to identify similarities between the sources themselves. This identification of similarities leads to a classification system for subduction zones. Here, it could be expected if two sources share enough common characteristics, other characteristics of interest may be similar as well. This concept
Edjabou, Maklawe Essonanawe; Martín-Fernández, Josep Antoni; Scheutz, Charlotte; Astrup, Thomas Fruergaard
2017-11-01
Data for fractional solid waste composition provide relative magnitudes of individual waste fractions, the percentages of which always sum to 100, thereby connecting them intrinsically. Due to this sum constraint, waste composition data represent closed data, and their interpretation and analysis require statistical methods, other than classical statistics that are suitable only for non-constrained data such as absolute values. However, the closed characteristics of waste composition data are often ignored when analysed. The results of this study showed, for example, that unavoidable animal-derived food waste amounted to 2.21±3.12% with a confidence interval of (-4.03; 8.45), which highlights the problem of the biased negative proportions. A Pearson's correlation test, applied to waste fraction generation (kg mass), indicated a positive correlation between avoidable vegetable food waste and plastic packaging. However, correlation tests applied to waste fraction compositions (percentage values) showed a negative association in this regard, thus demonstrating that statistical analyses applied to compositional waste fraction data, without addressing the closed characteristics of these data, have the potential to generate spurious or misleading results. Therefore, ¨compositional data should be transformed adequately prior to any statistical analysis, such as computing mean, standard deviation and correlation coefficients. Copyright © 2017 Elsevier Ltd. All rights reserved.
Energy Technology Data Exchange (ETDEWEB)
Cipolla, Valentina, E-mail: valentina.cipolla@yahoo.it [Department of Radiological Sciences, University of Rome “Sapienza”, Viale del Policlinico 155, 00161 Rome (Italy); Santucci, Domiziana; Guerrieri, Daniele; Drudi, Francesco Maria [Department of Radiological Sciences, University of Rome “Sapienza”, Viale del Policlinico 155, 00161 Rome (Italy); Meggiorini, Maria Letizia [Department of Gynaecological Sciences, University of Rome “Sapienza”, Viale del Policlinico 155, 00161 Rome (Italy); Felice, Carlo de [Department of Radiological Sciences, University of Rome “Sapienza”, Viale del Policlinico 155, 00161 Rome (Italy)
2014-12-15
Highlights: • Apparent diffusion coefficient is a quantitative parameter which reflects molecular water movement. • Grading is an independent prognostic factor which correlates with other histopathological features. • Apparent diffusion coefficient values were significantly different between G1 and G3 classes. - Abstract: Purpose: The aim of this study was to evaluate whether the apparent diffusion coefficient (ADC) provided by 3.0 T (3 T) magnetic resonance diffusion-weighted imaging (DWI) varied according to the grading of invasive breast carcinoma. Materials and methods: A total of 92 patients with 96 invasive breast cancer lesions were enrolled; all had undergone 3 T magnetic resonance imaging (MRI) for local staging. All lesions were confirmed by histological analysis, and tumor grade was established according to the Nottingham Grading System (NGS). MRI included both dynamic contrast-enhanced and DWI sequences, and ADC value was calculated for each lesion. ADC values were compared with NGS classification using the Mann–Whitney U and the Kruskal–Wallis H tests. Grading was considered as a comprehensive prognostic factor, and Rho Spearman test was performed to determine correlation between grading and tumor size, hormonal receptor status, HER2 expression and Ki67 index. Pearson's Chi square test was carried out to compare grading with the other prognostic factors. Results: ADC values were significantly higher in G1 than in G3 tumors. No significant difference was observed when G1 and G3 were compared with G2. Tumor size, hormonal receptor status, HER2 expression and Ki67 index correlated significantly with grading but there was a significant difference only between G1 and G3 related to the ER and PR status, HER2 expression and Ki67 index. There was no statistically significant difference in lesion size between the two groups. Conclusion: ADC values obtained on 3 T DWI correlated with low-grade (G1) and high-grade (G3) invasive breast carcinoma. 3
International Nuclear Information System (INIS)
Berrocal T, Mariella J.; Roberty, Nilson C.; Silva Neto, Antonio J.; Universidade Federal, Rio de Janeiro, RJ
2002-01-01
The solution of inverse problems in participating media where there is emission, absorption and dispersion of the radiation possesses several applications in engineering and medicine. The objective of this work is to estimative the coefficients of absorption and dispersion in two-dimensional heterogeneous participating media, using in independent form the Generalized Maximum Entropy and Levenberg Marquardt methods. Both methods are based on the solution of the direct problem that is modeled by the Boltzmann equation in cartesian geometry. Some cases testes are presented. (author)
International Nuclear Information System (INIS)
Korun, M.; Vodenik, B.; Zorko, B.
2016-01-01
Two simple methods for calculating the correlations between peaks appearing in gamma-ray spectra are described. We show how the areas are correlated when the peaks do not overlap, but the spectral regions used for the calculation of the background below the peaks do. When the peaks overlap, the correlation can be stronger than in the case of the non-overlapping peaks. The methods presented are simplified to the extent of allowing their implementation with manual calculations. They are intended for practitioners as additional tools to be used when the correlations between the areas of the peaks in the gamma-ray spectra are to be calculated. Also, the correlation coefficient between the number of counts in the peak and the number of counts in the continuous background below the peak is derived. - Highlights: • The correlation coefficients between areas of closely spaced peaks are assessed. • For isolated peaks the correlation arises from the common continuous background. • If peaks overlap the correlation coefficient depends on how much they overlap. • If peaks overlap also the background height affects the correlation coefficient. • The correlation coefficient between the peak area and its background is −1.
Improved efficiency of maximum likelihood analysis of time series with temporally correlated errors
Langbein, John
2017-08-01
Most time series of geophysical phenomena have temporally correlated errors. From these measurements, various parameters are estimated. For instance, from geodetic measurements of positions, the rates and changes in rates are often estimated and are used to model tectonic processes. Along with the estimates of the size of the parameters, the error in these parameters needs to be assessed. If temporal correlations are not taken into account, or each observation is assumed to be independent, it is likely that any estimate of the error of these parameters will be too low and the estimated value of the parameter will be biased. Inclusion of better estimates of uncertainties is limited by several factors, including selection of the correct model for the background noise and the computational requirements to estimate the parameters of the selected noise model for cases where there are numerous observations. Here, I address the second problem of computational efficiency using maximum likelihood estimates (MLE). Most geophysical time series have background noise processes that can be represented as a combination of white and power-law noise, 1/f^{α } with frequency, f. With missing data, standard spectral techniques involving FFTs are not appropriate. Instead, time domain techniques involving construction and inversion of large data covariance matrices are employed. Bos et al. (J Geod, 2013. doi: 10.1007/s00190-012-0605-0) demonstrate one technique that substantially increases the efficiency of the MLE methods, yet is only an approximate solution for power-law indices >1.0 since they require the data covariance matrix to be Toeplitz. That restriction can be removed by simply forming a data filter that adds noise processes rather than combining them in quadrature. Consequently, the inversion of the data covariance matrix is simplified yet provides robust results for a wider range of power-law indices.
Kishimoto, Keiko; Tajima, Shinya; Maeda, Ichiro; Takagi, Masayuki; Ueno, Takahiko; Suzuki, Nao; Nakajima, Yasuo
2016-08-01
Diffusion-weighted imaging (DWI) and the apparent diffusion coefficient (ADC) are widely used for detecting uterine endometrial cancer. The relationships between ADC values and pathological features of endometrial cancer have not yet been established. To investigate whether ADC values of endometrial cancer vary according to histologic tumor cellularity and tumor grade. We retrospectively reviewed 30 pathologically confirmed endometrial cancers. All patients underwent conventional non-enhanced magnetic resonance imaging (MRI) and DWI procedures, and ADC values were calculated. Tumor cellularity was evaluated by counting cancer cells in three high-power ( × 400) fields. The correlation between ADC values and tumor cellularity was assessed using Pearson's correlation coefficient test for statistical analysis. The mean ± standard deviation (SD) ADC value ( ×10(-3) mm(2)/s) of endometrial cancer was 0.85 ± 0.22 (range, 0.55-1.71). The mean ± SD tumor cellularity was 528.36 ± 16.89 (range, 298.0-763.6). ADC values were significantly inversely correlated with tumor cellularity. No significant relationship was observed between ADC values and tumor grade (mean ADC values: G1, 0.88 ± 0.265 × 10(-3) mm(2)/s; G2, 0.80 ± 0.178 × 10(-3) mm(2)/s; G3, 0.81 ± 0.117 × 10(-3) mm(2)/s). There is a significant inverse relationship between ADC values and tumor cellularity in endometrial cancer. No significant differences in average ADC value were observed between G1, G2, and G3 tumors. However, the lower the tumor grade, the wider the SD. © The Foundation Acta Radiologica 2015.
Zhao, Qile; Guo, Jing; Hu, Zhigang; Shi, Chuang; Liu, Jingnan; Cai, Hua; Liu, Xianglin
2011-05-01
The GRACE (Gravity Recovery And Climate Experiment) monthly gravity models have been independently produced and published by several research institutions, such as Center for Space Research (CSR), GeoForschungsZentrum (GFZ), Jet Propulsion Laboratory (JPL), Centre National d’Etudes Spatiales (CNES) and Delft Institute of Earth Observation and Space Systems (DEOS). According to their processing standards, above institutions use the traditional variational approach except that the DEOS exploits the acceleration approach. The background force models employed are rather similar. The produced gravity field models generally agree with one another in the spatial pattern. However, there are some discrepancies in the gravity signal amplitude between solutions produced by different institutions. In particular, 10%-30% signal amplitude differences in some river basins can be observed. In this paper, we implemented a variant of the traditional variational approach and computed two sets of monthly gravity field solutions using the data from January 2005 to December 2006. The input data are K-band range-rates (KBRR) and kinematic orbits of GRACE satellites. The main difference in the production of our two types of models is how to deal with nuisance parameters. This type of parameters is necessary to absorb low-frequency errors in the data, which are mainly the aliasing and instrument errors. One way is to remove the nuisance parameters before estimating the geopotential coefficients, called NPARB approach in the paper. The other way is to estimate the nuisance parameters and geopotential coefficients simultaneously, called NPESS approach. These two types of solutions mainly differ in geopotential coefficients from degree 2 to 5. This can be explained by the fact that the nuisance parameters and the gravity field coefficients are highly correlated, particularly at low degrees. We compare these solutions with the official and published ones by means of spectral analysis. It is
Raykov, Tenko; Marcoulides, George A.
2015-01-01
A latent variable modeling procedure that can be used to evaluate intraclass correlation coefficients in two-level settings with discrete response variables is discussed. The approach is readily applied when the purpose is to furnish confidence intervals at prespecified confidence levels for these coefficients in setups with binary or ordinal…
Spatial correlation in 3D MIMO channels using fourier coefficients of power spectrums
Nadeem, Qurrat-Ul-Ain
2015-03-01
In this paper, an exact closed-form expression for the Spatial Correlation Function (SCF) is derived for the standardized three-dimensional (3D) multiple-input multiple-output (MIMO) channel. This novel SCF is developed for a uniform linear array of antennas with non-isotropic antenna patterns. The proposed method resorts to the spherical harmonic expansion (SHE) of plane waves and the trigonometric expansion of Legendre and associated Legendre polynomials to obtain a closed-form expression for the SCF for arbitrary angular distributions and antenna patterns. The resulting expression depends on the underlying angular distributions and antenna patterns through the Fourier Series (FS) coefficients of power azimuth and elevation spectrums. The novelty of the proposed method lies in the SCF being valid for any 3D propagation environment. Numerical results validate the proposed analytical expression and study the impact of angular spreads on the correlation. The derived SCF will help evaluate the performance of correlated 3D MIMO channels in the future. © 2015 IEEE.
Rahman, Md Mostafizur; Fattah, Shaikh Anowarul
2017-01-01
In view of recent increase of brain computer interface (BCI) based applications, the importance of efficient classification of various mental tasks has increased prodigiously nowadays. In order to obtain effective classification, efficient feature extraction scheme is necessary, for which, in the proposed method, the interchannel relationship among electroencephalogram (EEG) data is utilized. It is expected that the correlation obtained from different combination of channels will be different for different mental tasks, which can be exploited to extract distinctive feature. The empirical mode decomposition (EMD) technique is employed on a test EEG signal obtained from a channel, which provides a number of intrinsic mode functions (IMFs), and correlation coefficient is extracted from interchannel IMF data. Simultaneously, different statistical features are also obtained from each IMF. Finally, the feature matrix is formed utilizing interchannel correlation features and intrachannel statistical features of the selected IMFs of EEG signal. Different kernels of the support vector machine (SVM) classifier are used to carry out the classification task. An EEG dataset containing ten different combinations of five different mental tasks is utilized to demonstrate the classification performance and a very high level of accuracy is achieved by the proposed scheme compared to existing methods.
Kim, Mimi; Kang, Tae Wook; Kim, Young Kon; Kim, Seong Hyun; Kwon, Wooil; Ha, Sang Yun; Ji, Sang A
2016-03-01
To evaluate the correlation between grade of pancreatic neuroendocrine tumours (pNETs) based on the 2010 World Health Organization (WHO) classification and the apparent diffusion coefficient (ADC), and to assess whether the ADC value and WHO classification can predict recurrence-free survival (RFS) after surgery for pNETs. This retrospective study was approved by the Institutional Review Board. The requirement for informed consent was waived. Between March 2009 and November 2014, forty-nine patients who underwent magnetic resonance (MR) imaging with diffusion-weighted image and subsequent surgery for single pNETs were included. Correlations among qualitative MR imaging findings, quantitative ADC values, and WHO classifications were assessed. An ordered logistic regression test was used to control for tumour size as a confounding factor. The association between ADC value (or WHO classification) and RFS was analysed. All tumors (n=49) were classified as low- (n=29, grade 1), intermediate- (n=17, grade 2), and high-grade (n=3, grade 3), respectively. The mean ADC of pNETs was moderately negatively correlated with WHO classification before and after adjustment for tumour size (ρ=-0.64, pcorrelated with WHO tumour grade, regardless of tumour size. However, the WHO tumour classification of pNET may be more suitable for predicting RFS than the ADC value. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.
Oggioni, Marco R; Coelho, Joana Rosado; Furi, Leonardo; Knight, Daniel R; Viti, Carlo; Orefici, Graziella; Martinez, Jose-Luis; Freitas, Ana Teresa; Coque, Teresa M; Morrissey, Ian
2015-01-01
There is a growing concern by regulatory authorities for the selection of antibiotic resistance caused by the use of biocidal products. We aimed to complete the detailed information on large surveys by investigating the relationship between biocide and antibiotic susceptibility profiles of a large number of Staphylococcus aureus isolates using four biocides and antibiotics commonly used in clinical practice. The minimal inhibitory concentration (MIC) for most clinically-relevant antibiotics was determined according to the standardized methodology for over 1600 clinical S. aureus isolates and compared to susceptibility profiles of benzalkonium chloride, chlorhexidine, triclosan, and sodium hypochlorite. The relationship between antibiotic and biocide susceptibility profiles was evaluated using non-linear correlations. The main outcome evidenced was an absence of any strong or moderate statistically significant correlation when susceptibilities of either triclosan or sodium hypochlorite were compared for any of the tested antibiotics. On the other hand, correlation coefficients for MICs of benzalkonium chloride and chlorhexidine were calculated above 0.4 for susceptibility to quinolones, beta-lactams, and also macrolides. Our data do not support any selective pressure for association between biocides and antibiotics resistance and furthermore do not allow for a defined risk evaluation for some of the compounds. Importantly, our data clearly indicate that there does not involve any risk of selection for antibiotic resistance for the compounds triclosan and sodium hypochlorite. These data hence infer that biocide selection for antibiotic resistance has had so far a less significant impact than feared.
Vispoel, Walter P; Morris, Carrie A; Kilinc, Murat
2018-05-02
Over the years, research in the social sciences has been dominated by reporting of reliability coefficients that fail to account for key sources of measurement error. Use of these coefficients, in turn, to correct for measurement error can hinder scientific progress by misrepresenting true relationships among the underlying constructs being investigated. In the research reported here, we addressed these issues using generalizability theory (G-theory) in both traditional and new ways to account for the three key sources of measurement error (random-response, specific-factor, and transient) that affect scores from objectively scored measures. Results from 20 widely used measures of personality, self-concept, and socially desirable responding showed that conventional indices consistently misrepresented reliability and relationships among psychological constructs by failing to account for key sources of measurement error and correlated transient errors within occasions. The results further revealed that G-theory served as an effective framework for remedying these problems. We discuss possible extensions in future research and provide code from the computer package R in an online supplement to enable readers to apply the procedures we demonstrate to their own research.
Saadat, Mostafa; Zendeh-Boodi, Zahra
2006-09-01
The aim of the study is to obtain more insight into the possible association between consanguinity and the incidence of deliberate self-burning. Data were obtained by analysis of medical records of patients hospitalized in two referral burn centers: Chormy Burn Center (Bushehr Province, south of Iran) from March 21, 1998, through March 20, 2004, and Shahid Sadoqi Center of Burns and Injuries (Yazd Province, center of Iran) from March 21, 2000, through March 20, 2004. The incidence of suicidal burns was 6.51 and 2.32/100,000 person-years for Bushehr and Yazd Provinces, respectively. The observed sex ratio of patients in both centers indicated there was a female predominance in patients with self-inflicted burns. Using patients' home addresses, patients were sorted into 16 cities. The incidence of suicide by self-burning ranged from 0.80 (for Tabas, located in Yazd Province) to 12.60/100,000 person-years (for Dilam, located in Bushehr Province). The coefficient of inbreeding defines the probability that an individual received both alleles of a pair from an identical ancestral source. There was a significant correlation between incidences of suicidal burns and mean coefficient of inbreeding (r = 0.782, df = 14, p < 0.001). In addition to other factors, consanguineous marriage may be a risk factor that influences the incidence of suicidal burns in a population.
Liang, Yunyun; Liu, Sanyang; Zhang, Shengli
2016-12-01
Apoptosis, or programed cell death, plays a central role in the development and homeostasis of an organism. Obtaining information on subcellular location of apoptosis proteins is very helpful for understanding the apoptosis mechanism. The prediction of subcellular localization of an apoptosis protein is still a challenging task, and existing methods mainly based on protein primary sequences. In this paper, we introduce a new position-specific scoring matrix (PSSM)-based method by using detrended cross-correlation (DCCA) coefficient of non-overlapping windows. Then a 190-dimensional (190D) feature vector is constructed on two widely used datasets: CL317 and ZD98, and support vector machine is adopted as classifier. To evaluate the proposed method, objective and rigorous jackknife cross-validation tests are performed on the two datasets. The results show that our approach offers a novel and reliable PSSM-based tool for prediction of apoptosis protein subcellular localization. Copyright © 2016 Elsevier Inc. All rights reserved.
Li, Yuxing; Li, Yaan; Chen, Xiao; Yu, Jing
2017-12-26
As the sound signal of ships obtained by sensors contains other many significant characteristics of ships and called ship-radiated noise (SN), research into a denoising algorithm and its application has obtained great significance. Using the advantage of variational mode decomposition (VMD) combined with the correlation coefficient for denoising, a hybrid secondary denoising algorithm is proposed using secondary VMD combined with a correlation coefficient (CC). First, different kinds of simulation signals are decomposed into several bandwidth-limited intrinsic mode functions (IMFs) using VMD, where the decomposition number by VMD is equal to the number by empirical mode decomposition (EMD); then, the CCs between the IMFs and the simulation signal are calculated respectively. The noise IMFs are identified by the CC threshold and the rest of the IMFs are reconstructed in order to realize the first denoising process. Finally, secondary denoising of the simulation signal can be accomplished by repeating the above steps of decomposition, screening and reconstruction. The final denoising result is determined according to the CC threshold. The denoising effect is compared under the different signal-to-noise ratio and the time of decomposition by VMD. Experimental results show the validity of the proposed denoising algorithm using secondary VMD (2VMD) combined with CC compared to EMD denoising, ensemble EMD (EEMD) denoising, VMD denoising and cubic VMD (3VMD) denoising, as well as two denoising algorithms presented recently. The proposed denoising algorithm is applied to feature extraction and classification for SN signals, which can effectively improve the recognition rate of different kinds of ships.
Directory of Open Access Journals (Sweden)
Yuxing Li
2017-12-01
Full Text Available As the sound signal of ships obtained by sensors contains other many significant characteristics of ships and called ship-radiated noise (SN, research into a denoising algorithm and its application has obtained great significance. Using the advantage of variational mode decomposition (VMD combined with the correlation coefficient for denoising, a hybrid secondary denoising algorithm is proposed using secondary VMD combined with a correlation coefficient (CC. First, different kinds of simulation signals are decomposed into several bandwidth-limited intrinsic mode functions (IMFs using VMD, where the decomposition number by VMD is equal to the number by empirical mode decomposition (EMD; then, the CCs between the IMFs and the simulation signal are calculated respectively. The noise IMFs are identified by the CC threshold and the rest of the IMFs are reconstructed in order to realize the first denoising process. Finally, secondary denoising of the simulation signal can be accomplished by repeating the above steps of decomposition, screening and reconstruction. The final denoising result is determined according to the CC threshold. The denoising effect is compared under the different signal-to-noise ratio and the time of decomposition by VMD. Experimental results show the validity of the proposed denoising algorithm using secondary VMD (2VMD combined with CC compared to EMD denoising, ensemble EMD (EEMD denoising, VMD denoising and cubic VMD (3VMD denoising, as well as two denoising algorithms presented recently. The proposed denoising algorithm is applied to feature extraction and classification for SN signals, which can effectively improve the recognition rate of different kinds of ships.
Directory of Open Access Journals (Sweden)
Stella Crosara Lopes
2009-04-01
Full Text Available The purpose of this study was to evaluate the metal-ceramic bond strength (MCBS of 6 metal-ceramic pairs (2 Ni-Cr alloys and 1 Pd-Ag alloy with 2 dental ceramics and correlate the MCBS values with the differences between the coefficients of linear thermal expansion (CTEs of the metals and ceramics. Verabond (VB Ni-Cr-Be alloy, Verabond II (VB2, Ni-Cr alloy, Pors-on 4 (P, Pd-Ag alloy, and IPS (I and Duceram (D ceramics were used for the MCBS test and dilatometric test. Forty-eight ceramic rings were built around metallic rods (3.0 mm in diameter and 70.0 mm in length made from the evaluated alloys. The rods were subsequently embedded in gypsum cast in order to perform a tensile load test, which enabled calculating the CMBS. Five specimens (2.0 mm in diameter and 12.0 mm in length of each material were made for the dilatometric test. The chromel-alumel thermocouple required for the test was welded into the metal test specimens and inserted into the ceramics. ANOVA and Tukey's test revealed significant differences (p=0.01 for the MCBS test results (MPa, with PI showing higher MCBS (67.72 than the other pairs, which did not present any significant differences. The CTE (10-6 oC-1 differences were: VBI (0.54, VBD (1.33, VB2I (-0.14, VB2D (0.63, PI (1.84 and PD (2.62. Pearson's correlation test (r=0.17 was performed to evaluate of correlation between MCBS and CTE differences. Within the limitations of this study and based on the obtained results, there was no correlation between MCBS and CTE differences for the evaluated metal-ceramic pairs.
Lopes, Stella Crosara; Pagnano, Valéria Oliveira; Rollo, João Manuel Domingos de Almeida; Leal, Mônica Barbosa; Bezzon, Osvaldo Luiz
2009-01-01
The purpose of this study was to evaluate the metal-ceramic bond strength (MCBS) of 6 metal-ceramic pairs (2 Ni-Cr alloys and 1 Pd-Ag alloy with 2 dental ceramics) and correlate the MCBS values with the differences between the coefficients of linear thermal expansion (CTEs) of the metals and ceramics. Verabond (VB) Ni-Cr-Be alloy, Verabond II (VB2), Ni-Cr alloy, Pors-on 4 (P), Pd-Ag alloy, and IPS (I) and Duceram (D) ceramics were used for the MCBS test and dilatometric test. Forty-eight ceramic rings were built around metallic rods (3.0 mm in diameter and 70.0 mm in length) made from the evaluated alloys. The rods were subsequently embedded in gypsum cast in order to perform a tensile load test, which enabled calculating the CMBS. Five specimens (2.0 mm in diameter and 12.0 mm in length) of each material were made for the dilatometric test. The chromel-alumel thermocouple required for the test was welded into the metal test specimens and inserted into the ceramics. ANOVA and Tukey's test revealed significant differences (p=0.01) for the MCBS test results (MPa), with PI showing higher MCBS (67.72) than the other pairs, which did not present any significant differences. The CTE (10(-6) oC(-1)) differences were: VBI (0.54), VBD (1.33), VB2I (-0.14), VB2D (0.63), PI (1.84) and PD (2.62). Pearson's correlation test (r=0.17) was performed to evaluate of correlation between MCBS and CTE differences. Within the limitations of this study and based on the obtained results, there was no correlation between MCBS and CTE differences for the evaluated metal-ceramic pairs.
R package to estimate intracluster correlation coefficient with confidence interval for binary data.
Chakraborty, Hrishikesh; Hossain, Akhtar
2018-03-01
The Intracluster Correlation Coefficient (ICC) is a major parameter of interest in cluster randomized trials that measures the degree to which responses within the same cluster are correlated. There are several types of ICC estimators and its confidence intervals (CI) suggested in the literature for binary data. Studies have compared relative weaknesses and advantages of ICC estimators as well as its CI for binary data and suggested situations where one is advantageous in practical research. The commonly used statistical computing systems currently facilitate estimation of only a very few variants of ICC and its CI. To address the limitations of current statistical packages, we developed an R package, ICCbin, to facilitate estimating ICC and its CI for binary responses using different methods. The ICCbin package is designed to provide estimates of ICC in 16 different ways including analysis of variance methods, moments based estimation, direct probabilistic methods, correlation based estimation, and resampling method. CI of ICC is estimated using 5 different methods. It also generates cluster binary data using exchangeable correlation structure. ICCbin package provides two functions for users. The function rcbin() generates cluster binary data and the function iccbin() estimates ICC and it's CI. The users can choose appropriate ICC and its CI estimate from the wide selection of estimates from the outputs. The R package ICCbin presents very flexible and easy to use ways to generate cluster binary data and to estimate ICC and it's CI for binary response using different methods. The package ICCbin is freely available for use with R from the CRAN repository (https://cran.r-project.org/package=ICCbin). We believe that this package can be a very useful tool for researchers to design cluster randomized trials with binary outcome. Copyright © 2017 Elsevier B.V. All rights reserved.
Energy Technology Data Exchange (ETDEWEB)
Carvalho, Priscilla R.; Munita, Casimiro S.; Lapolli, André L., E-mail: prii.ramos@gmail.com, E-mail: camunita@ipen.br, E-mail: alapolli@ipen.br [Instituto de Pesquisas Energéticas e Nucleares (IPEN/CNEN-SP), São Paulo, SP (Brazil)
2017-07-01
The literature presents many methods for partitioning of data base, and is difficult choose which is the most suitable, since the various combinations of methods based on different measures of dissimilarity can lead to different patterns of grouping and false interpretations. Nevertheless, little effort has been expended in evaluating these methods empirically using an archaeological data base. In this way, the objective of this work is make a comparative study of the different cluster analysis methods and identify which is the most appropriate. For this, the study was carried out using a data base of the Archaeometric Studies Group from IPEN-CNEN/SP, in which 45 samples of ceramic fragments from three archaeological sites were analyzed by instrumental neutron activation analysis (INAA) which were determinate the mass fraction of 13 elements (As, Ce, Cr, Eu, Fe, Hf, La, Na, Nd, Sc, Sm, Th, U). The methods used for this study were: single linkage, complete linkage, average linkage, centroid and Ward. The validation was done using the cophenetic correlation coefficient and comparing these values the average linkage method obtained better results. A script of the statistical program R with some functions was created to obtain the cophenetic correlation. By means of these values was possible to choose the most appropriate method to be used in the data base. (author)
International Nuclear Information System (INIS)
Carvalho, Priscilla R.; Munita, Casimiro S.; Lapolli, André L.
2017-01-01
The literature presents many methods for partitioning of data base, and is difficult choose which is the most suitable, since the various combinations of methods based on different measures of dissimilarity can lead to different patterns of grouping and false interpretations. Nevertheless, little effort has been expended in evaluating these methods empirically using an archaeological data base. In this way, the objective of this work is make a comparative study of the different cluster analysis methods and identify which is the most appropriate. For this, the study was carried out using a data base of the Archaeometric Studies Group from IPEN-CNEN/SP, in which 45 samples of ceramic fragments from three archaeological sites were analyzed by instrumental neutron activation analysis (INAA) which were determinate the mass fraction of 13 elements (As, Ce, Cr, Eu, Fe, Hf, La, Na, Nd, Sc, Sm, Th, U). The methods used for this study were: single linkage, complete linkage, average linkage, centroid and Ward. The validation was done using the cophenetic correlation coefficient and comparing these values the average linkage method obtained better results. A script of the statistical program R with some functions was created to obtain the cophenetic correlation. By means of these values was possible to choose the most appropriate method to be used in the data base. (author)
Kunz, Cornelia U; Stallard, Nigel; Parsons, Nicholas; Todd, Susan; Friede, Tim
2017-03-01
Regulatory authorities require that the sample size of a confirmatory trial is calculated prior to the start of the trial. However, the sample size quite often depends on parameters that might not be known in advance of the study. Misspecification of these parameters can lead to under- or overestimation of the sample size. Both situations are unfavourable as the first one decreases the power and the latter one leads to a waste of resources. Hence, designs have been suggested that allow a re-assessment of the sample size in an ongoing trial. These methods usually focus on estimating the variance. However, for some methods the performance depends not only on the variance but also on the correlation between measurements. We develop and compare different methods for blinded estimation of the correlation coefficient that are less likely to introduce operational bias when the blinding is maintained. Their performance with respect to bias and standard error is compared to the unblinded estimator. We simulated two different settings: one assuming that all group means are the same and one assuming that different groups have different means. Simulation results show that the naïve (one-sample) estimator is only slightly biased and has a standard error comparable to that of the unblinded estimator. However, if the group means differ, other estimators have better performance depending on the sample size per group and the number of groups. © 2016 The Authors. Biometrical Journal Published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Grueneisen, Johannes; Beiderwellen, Karsten; Heusch, Philipp; Buderath, Paul; Aktas, Bahriye; Gratz, Marcel; Forsting, Michael; Lauenstein, Thomas; Ruhlmann, Verena; Umutlu, Lale
2014-01-01
To evaluate a potential correlation of the maximum standard uptake value (SUVmax) and the minimum apparent diffusion coefficient (ADCmin) in primary and recurrent cervical cancer based on integrated PET/MRI examinations. 19 consecutive patients (mean age 51.6 years; range 30-72 years) with histopathologically confirmed primary cervical cancer (n = 9) or suspected tumor recurrence (n = 10) were prospectively enrolled for an integrated PET/MRI examination. Two radiologists performed a consensus reading in random order, using a dedicated post-processing software. Polygonal regions of interest (ROI) covering the entire tumor lesions were drawn into PET/MR images to assess SUVmax and into ADC parameter maps to determine ADCmin values. Pearson's correlation coefficients were calculated to assess a potential correlation between the mean values of ADCmin and SUVmax. In 15 out of 19 patients cervical cancer lesions (n = 12) or lymph node metastases (n = 42) were detected. Mean SUVmax (12.5 ± 6.5) and ADCmin (644.5 ± 179.7 × 10(-5) mm2/s) values for all assessed tumor lesions showed a significant but weak inverse correlation (R = -0.342, p correlation between SUVmax and ADCmin (R = -0.692, p correlation. These initial results of this emerging hybrid imaging technique demonstrate the high diagnostic potential of simultaneous PET/MR imaging for the assessment of functional biomarkers, revealing a significant and strong correlation of tumor metabolism and higher cellularity in cervical cancer lesions.
Pradhan, Snigdhendubala; Boernick, Hilmar; Kumar, Pradeep; Mehrotra, Indu
2016-07-15
The correlation between octanol-water partition coefficient (KOW) and the transport of aqueous samples containing single organic compound is well documented. The concept of the KOW of river water containing the mixture of organics was evolved by Pradhan et al. (2015). The present study aims at determining the KOW and sorption parameters of synthetic aqueous samples and river water to finding out the correlation, if any. The laboratory scale columns packed with aquifer materials were fed with synthetic and river water samples. Under the operating conditions, the compounds in the samples did not separate, and all the samples that contain more than one organic compound yielded a single breakthrough curve. Breakthrough curves simulated from sorption isotherms were compared with those from the column runs. The sorption parameters such as retardation factor (Rf), height of mass transfer zone (HMTZ), rate of mass transfer zone (RMTZ), breakpoint column capacity (qb) and maximum column capacity (qx) estimated from column runs, sorption isotherms and models developed by Yoon-Nelson, Bohart-Adam and Thomas were in agreement. The empirical correlations were found between the KOW and sorption parameters. The transport of the organics measured as dissolved organic carbon (DOC) through the aquifer can be predicted from the KOW of the river water and other water samples. The novelty of the study is to measure KOW and to envisage the fate of the DOC of the river water, particularly during riverbank filtration. Statistical analysis of the results revealed a fair agreement between the observed and computed values. Copyright © 2016 Elsevier Ltd. All rights reserved.
Correlation between apparent diffusion coefficients and HER2 status in gastric cancers: pilot study
International Nuclear Information System (INIS)
He, Jian; Shi, Hua; Zhou, Zhuping; Chen, Jun; Guan, Wenxian; Wang, Hao; Yu, Haiping; Liu, Song; Zhou, Zhengyang; Yang, Xiaofeng; Liu, Tian
2015-01-01
To evaluate whether apparent diffusion coefficient (ADC) value of gastric cancer obtained from diffusion weighted imaging (DWI) correlates with the HER2 status. Forty-five patients, who had been diagnosed with gastric cancer through biopsy, were enrolled in this IRB-approved study. Each patient underwent a DWI (b values: 0 and 1,000 sec/mm 2 ) prior to surgery (curative gastrectomy or palliative resection). Postoperative microscopic findings, HER2 status by immunohistochemical analysis and fluorescence in situ hybridization (FISH) were obtained. HER2 status was compared among gastric cancers with various histopathological features using the chi square test. The ADC values of gastric cancers with positive and negative HER2 were compared using the student t test. A weak yet significant correlation was observed between the mean ADC values and HER2 status (r = 0.312, P = 0.037) and scores (r = 0.419, P = 0.004). The mean ADC value of HER2-positive gastric cancers was significantly higher than those of HER2-negative tumors (1.211 vs. 0.984 mm 2 /s, P = 0.020). The minimal ADC value of HER2-positive gastric cancers was significantly higher than those of HER2-negative tumors (1.105 vs. 0.905 × 10 −3 mm 2 /s, P = 0.036). In this pilot study, we have demonstrated that the ADC values of gastric cancer correlate with the HER2 status. Future research is warranted to see if DWI can predict HER2 status and help in tailoring therapy for gastric cancer
HJELM, HOWARD; NORRIS, RAYMOND C.
THE STUDY EMPIRICALLY DETERMINED THE EFFECTS OF NONNORMALITY UPON SOME SAMPLING DISTRIBUTIONS OF THE PRODUCT MOMENT CORRELATION COEFFICIENT (PMCC). SAMPLING DISTRIBUTIONS OF THE PMCC WERE OBTAINED BY DRAWING NUMEROUS SAMPLES FROM CONTROL AND EXPERIMENTAL POPULATIONS HAVING VARIOUS DEGREES OF NONNORMALITY AND BY CALCULATING CORRELATION COEFFICIENTS…
Fukuda, Makoto; Yoshimura, Kengo; Namekawa, Koki; Sakai, Kiyotaka
2017-06-01
The objective of the present study is to evaluate the effect of filtration coefficient and internal filtration on dialysis fluid flow and mass transfer coefficient in dialyzers using dimensionless mass transfer correlation equations. Aqueous solution of vitamin B 12 clearances were obtained for REXEED-15L as a low flux dialyzer, and APS-15EA and APS-15UA as high flux dialyzers. All the other design specifications were identical for these dialyzers except for filtration coefficient. The overall mass transfer coefficient was calculated, moreover, the exponents of Reynolds number (Re) and film mass transfer coefficient of the dialysis-side fluid (k D ) for each flow rate were derived from the Wilson plot and dimensionless correlation equation. The exponents of Re were 0.4 for the low flux dialyzer whereas 0.5 for the high flux dialyzers. Dialysis fluid of the low flux dialyzer was close to laminar flow because of its low filtration coefficient. On the other hand, dialysis fluid of the high flux dialyzers was assumed to be orthogonal flow. Higher filtration coefficient was associated with higher k D influenced by mass transfer rate through diffusion and internal filtration. Higher filtration coefficient of dialyzers and internal filtration affect orthogonal flow of dialysis fluid.
Shih, I-Lun; Yen, Ruoh-Fang; Chen, Chi-An; Chen, Bang-Bin; Wei, Shwu-Yuan; Chang, Wen-Chun; Sheu, Bor-Ching; Cheng, Wen-Fang; Tseng, Yao-Hui; Chen, Xin-Jia; Chen, Chi-Hau; Wei, Lin-Hung; Chiang, Ying-Cheng; Torng, Pao-Ling; Yen, Men-Luh; Shih, Tiffany Ting-Fang
2015-12-01
To evaluate the correlation between maximum standardized uptake value (SUVmax ) and minimum apparent diffusion coefficient (ADCmin ) of endometrial cancer derived from an integrated positron emission tomography / magnetic resonance (PET/MR) system and to determine their correlation with pathological prognostic factors. This prospective study was approved by the Institutional Review Board of the hospital, and informed consent was obtained. Between April and December 2014, 47 consecutive patients with endometrial cancer were enrolled and underwent simultaneous PET/MR examinations before surgery. Thirty-six patients with measurable tumors on PET/MR were included for image analysis. Pearson's correlation coefficient was used to evaluate the correlation between SUVmax and ADCmin of the tumors. The Mann-Whitney U-test was utilized to evaluate relationships between these two imaging biomarkers and pathological prognostic factors. The mean SUVmax and ADCmin were 14.7 ± 7.1 and 0.48 ± 0.13 × 10(-3) mm(2) /s, respectively. A significant inverse correlation was found between SUVmax and ADCmin (r = -0.53; P = 0.001). SUVmax was significantly higher in tumors with advanced stage, deep myometrial invasion, cervical invasion, lymphovascular space involvement, and lymph node metastasis (P correlated and are associated with pathological prognostic factors. © 2015 Wiley Periodicals, Inc.
Pal, Shyamali
2017-12-01
The presence of Macro prolactin is a significant cause of elevated prolactin resulting in misdiagnosis in all automated systems. Poly ethylene glycol (PEG) pretreatment is the preventive process but such process includes the probability of loss of a fraction of bioactive prolactin. Surprisingly, PEG treated EQAS & IQAS samples in Cobas e 411 are found out to be correlating with direct results of at least 3 immunoassay systems and treated and untreated Cobas e 411 results are comparable by a correlation coefficient. Comparison of EQAS, IQAS and patient samples were done to find out the trueness of such correlation factor. Study with patient's results have established the correlation coefficient is valid for very small concentration of prolactin also. EQAS, IQAS and 150 patient samples were treated with PEG and prolactin results of treated and untreated samples obtained from Roche Cobas e 411. 25 patient's results (treated) were compared with direct results in Advia Centaur, Architect I & Access2 systems. Correlation coefficient was obtained from trend line of the treated and untreated results. Two tailed p-value obtained from regression coefficient(r) and sample size. The correlation coefficient is in the range (0.761-0.771). Reverse correlation range is (1.289-1.301). r value of two sets of calculated results were 0.995. Two tailed p- value is zero approving dismissal of null hypothesis. The z-score of EQAS does not always assure authenticity of resultsPEG precipitation is correlated by the factor 0.761 even in very small concentrationsAbbreviationsGFCgel filtration chromatographyPEGpolyethylene glycolEQASexternal quality assurance systemM-PRLmacro prolactinPRLprolactinECLIAelectro-chemiluminescence immunoassayCLIAclinical laboratory improvement amendmentsIQASinternal quality assurance systemrregression coefficient.
Meyer, Hans-Jonas; Ziemann, Oliver; Kornhuber, Malte; Emmer, Alexander; Quäschling, Ulf; Schob, Stefan; Surov, Alexey
2018-06-01
Background Magnetic resonance imaging (MRI) is widely used in several muscle disorders. Diffusion-weighted imaging (DWI) is an imaging modality, which can reflect microstructural tissue composition. The apparent diffusion coefficient (ADC) is used to quantify the random motion of water molecules in tissue. Purpose To investigate ADC values in patients with myositis and non-inflammatory myopathy and to analyze possible associations between ADC and laboratory parameters in these patients. Material and Methods Overall, 17 patients with several myositis entities, eight patients with non-inflammatory myopathies, and nine patients without muscle disorder as a control group were included in the study (mean age = 55.3 ± 14.3 years). The diagnosis was confirmed by histopathology in every case. DWI was obtained in a 1.5-T scanner using two b-values: 0 and 1000 s/mm 2 . In all patients, the blood sample was acquired within three days to the MRI. The following serological parameters were estimated: C-reactive protein, lactate dehydrogenase, alanine aminotransferase, aspartate aminotransferase, creatine kinase, and myoglobine. Results The estimated mean ADC value for the myositis group was 1.89 ± 0.37 × 10 -3 mm 2 /s and for the non-inflammatory myopathy group was 1.79 ± 0.33 × 10 -3 mm 2 /s, respectively. The mean ADC values (1.15 ± 0.37 × 10 -3 mm 2 /s) were significantly higher to unaffected muscles (vs. myositis P = 0.0002 and vs. myopathy P = 0.0021). There were no significant correlations between serological parameters and ADC values. Conclusion Affected muscles showed statistically significantly higher ADC values than normal muscles. No linear correlations between ADC and serological parameters were identified.
Energy Technology Data Exchange (ETDEWEB)
Goshima, Satoshi [Department of Radiology, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan)], E-mail: gossy@par.odn.ne.jp; Kanematsu, Masayuki [Department of Radiology, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan); Department of Radiology Services, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan); Kondo, Hiroshi [Department of Radiology, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan); Yokoyama, Ryujiro; Kajita, Kimihiro [Department of Radiology Services, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan); Tsuge, Yusuke [Department of Radiology, Gifu University Hospital, 1-1 Yanagido, Gifu 501-1194 (Japan); Shiratori, Yoshimune [Department of Medical Informatics, Gifu University School of Medicine, Gifu (Japan); Onozuka, Minoru [Department of Physiology and Neuroscience, Kanagawa Dental College, Yokosuka (Japan); Moriyama, Noriyuki [Research Center for Cancer Prevention and Screening, National Cancer Center Hospital, Tsukiji (Japan)
2009-05-15
Purpose: To correlate hepatic hemangioma enhancement types in gadolinium-enhanced magnetic resonance (MR) images with diffusion-weighted MR findings and apparent diffusion coefficients (ADCs). Materials and methods: Respiratory-triggered diffusion-weighted MR images (TR/TE, 2422/46 ms; parallel imaging factor, 2; b factor, 500 s/mm{sup 2}; number of averaging, 6) obtained in 35 patients with 44 hepatic hemangiomas diagnosed by gadolinium-enhanced MR and by follow-up imaging were retrospectively evaluated. Hemangiomas were classified into three enhancement types based on gadolinium-enhanced MR imaging findings: type I, early-enhancement type; type II, peripheral nodular enhancement type; type III, delayed enhancement type. Two blinded readers qualitatively assessed lesion sizes and signal intensities on T2-weighted turbo spin-echo and diffusion-weighted images. The ADCs of hemangiomas were also measured. Results: No significant difference was observed between the three enhancement types in terms of signal intensities on T2-weighted images. Signal intensities on diffusion-weighted images were lower in the order type I to III (P < .01), and mean ADCs were 2.18 x 10{sup -3}, 1.86 x 10{sup -3}, and 1.71 x 10{sup -3} mm{sup 2}/s for types I, II, and III, respectively (P < .01). No correlation was found between lesion sizes and ADCs. Conclusion: Hepatic hemangiomas were found to have enhancement type dependent signal intensities and ADCs on diffusion-weighted MR images. Further studies will have to substantiate that these diffusion patterns might reflect intratumoral blood flow or perfusion.
A Guideline of Selecting and Reporting Intraclass Correlation Coefficients for Reliability Research.
Koo, Terry K; Li, Mae Y
2016-06-01
Intraclass correlation coefficient (ICC) is a widely used reliability index in test-retest, intrarater, and interrater reliability analyses. This article introduces the basic concept of ICC in the content of reliability analysis. There are 10 forms of ICCs. Because each form involves distinct assumptions in their calculation and will lead to different interpretations, researchers should explicitly specify the ICC form they used in their calculation. A thorough review of the research design is needed in selecting the appropriate form of ICC to evaluate reliability. The best practice of reporting ICC should include software information, "model," "type," and "definition" selections. When coming across an article that includes ICC, readers should first check whether information about the ICC form has been reported and if an appropriate ICC form was used. Based on the 95% confident interval of the ICC estimate, values less than 0.5, between 0.5 and 0.75, between 0.75 and 0.9, and greater than 0.90 are indicative of poor, moderate, good, and excellent reliability, respectively. This article provides a practical guideline for clinical researchers to choose the correct form of ICC and suggests the best practice of reporting ICC parameters in scientific publications. This article also gives readers an appreciation for what to look for when coming across ICC while reading an article.
Satomura, Hironori; Adachi, Kohei
2013-07-01
To facilitate the interpretation of canonical correlation analysis (CCA) solutions, procedures have been proposed in which CCA solutions are orthogonally rotated to a simple structure. In this paper, we consider oblique rotation for CCA to provide solutions that are much easier to interpret, though only orthogonal rotation is allowed in the existing formulations of CCA. Our task is thus to reformulate CCA so that its solutions have the freedom of oblique rotation. Such a task can be achieved using Yanai's (Jpn. J. Behaviormetrics 1:46-54, 1974; J. Jpn. Stat. Soc. 11:43-53, 1981) generalized coefficient of determination for the objective function to be maximized in CCA. The resulting solutions are proved to include the existing orthogonal ones as special cases and to be rotated obliquely without affecting the objective function value, where ten Berge's (Psychometrika 48:519-523, 1983) theorems on suborthonormal matrices are used. A real data example demonstrates that the proposed oblique rotation can provide simple, easily interpreted CCA solutions.
Wang, Jianji; Zheng, Nanning
2013-09-01
Fractal image compression (FIC) is an image coding technology based on the local similarity of image structure. It is widely used in many fields such as image retrieval, image denoising, image authentication, and encryption. FIC, however, suffers from the high computational complexity in encoding. Although many schemes are published to speed up encoding, they do not easily satisfy the encoding time or the reconstructed image quality requirements. In this paper, a new FIC scheme is proposed based on the fact that the affine similarity between two blocks in FIC is equivalent to the absolute value of Pearson's correlation coefficient (APCC) between them. First, all blocks in the range and domain pools are chosen and classified using an APCC-based block classification method to increase the matching probability. Second, by sorting the domain blocks with respect to APCCs between these domain blocks and a preset block in each class, the matching domain block for a range block can be searched in the selected domain set in which these APCCs are closer to APCC between the range block and the preset block. Experimental results show that the proposed scheme can significantly speed up the encoding process in FIC while preserving the reconstructed image quality well.
Aly, Sharif S; Zhao, Jianyang; Li, Ben; Jiang, Jiming
2014-01-01
The Intraclass Correlation Coefficient (ICC) is commonly used to estimate the similarity between quantitative measures obtained from different sources. Overdispersed data is traditionally transformed so that linear mixed model (LMM) based ICC can be estimated. A common transformation used is the natural logarithm. The reliability of environmental sampling of fecal slurry on freestall pens has been estimated for Mycobacterium avium subsp. paratuberculosis using the natural logarithm transformed culture results. Recently, the negative binomial ICC was defined based on a generalized linear mixed model for negative binomial distributed data. The current study reports on the negative binomial ICC estimate which includes fixed effects using culture results of environmental samples. Simulations using a wide variety of inputs and negative binomial distribution parameters (r; p) showed better performance of the new negative binomial ICC compared to the ICC based on LMM even when negative binomial data was logarithm, and square root transformed. A second comparison that targeted a wider range of ICC values showed that the mean of estimated ICC closely approximated the true ICC.
A Bayesian estimate of the concordance correlation coefficient with skewed data.
Feng, Dai; Baumgartner, Richard; Svetnik, Vladimir
2015-01-01
Concordance correlation coefficient (CCC) is one of the most popular scaled indices used to evaluate agreement. Most commonly, it is used under the assumption that data is normally distributed. This assumption, however, does not apply to skewed data sets. While methods for the estimation of the CCC of skewed data sets have been introduced and studied, the Bayesian approach and its comparison with the previous methods has been lacking. In this study, we propose a Bayesian method for the estimation of the CCC of skewed data sets and compare it with the best method previously investigated. The proposed method has certain advantages. It tends to outperform the best method studied before when the variation of the data is mainly from the random subject effect instead of error. Furthermore, it allows for greater flexibility in application by enabling incorporation of missing data, confounding covariates, and replications, which was not considered previously. The superiority of this new approach is demonstrated using simulation as well as real-life biomarker data sets used in an electroencephalography clinical study. The implementation of the Bayesian method is accessible through the Comprehensive R Archive Network. Copyright © 2015 John Wiley & Sons, Ltd.
Wang, Jifei; Sun, Meili; Liu, Dawei; Hu, Xiaoshu; Pui, Margaret H; Meng, Quanfei; Gao, Zhenhua
2017-08-01
Background Neoadjuvant chemotherapy has made limb-salvage surgery possible for the patients with osteosarcoma. Diffusion-weighted magnetic resonance imaging (DWI) has been used to monitor chemotherapy response. Purpose To correlate the apparent diffusion coefficient (ADC) values with histopathology subtypes of osteosarcoma after neoadjuvant chemotherapy. Material and Methods Twelve patients with osteoblastic (n = 7), chondroblastic (n = 4), and fibroblastic (n = 1) osteosarcomas underwent post-chemotherapy DWI before limb-salvage surgery. ADCs corresponding to 127 histological tissue samples from the 12 resected specimens were compared to histological features. Results The mean ADC value of non-cartilaginous viable tumor (38/91, ADC = 1.22 ± 0.03 × 10 -3 mm 2 /s) was significantly ( P 0.05) different between viable cartilaginous tumor and cystic/hemorrhagic necrosis. Conclusion DWI allows assessment of tumor necrosis after neoadjuvant chemotherapy by ADC differences between viable tumor and necrosis in fibroblastic and osteoblastic osteosarcomas whereas viable chondroblastic osteosarcoma has high ADC and cannot be distinguished reliably from necrosis.
Wang, Fang
2016-06-01
In order to detect and quantify asymmetry of two time series, a novel cross-correlation coefficient is proposed based on recent asymmetric detrended cross-correlation analysis (A-DXA), which we called A-DXA coefficient. The A-DXA coefficient, as an important extension of DXA coefficient ρDXA, contains two directional asymmetric cross-correlated indexes, describing upwards and downwards asymmetric cross-correlations, respectively. By using the information of directional covariance function of two time series and directional variance function of each series itself instead of power-law between the covariance function and time scale, the proposed A-DXA coefficient can well detect asymmetry between the two series no matter whether the cross-correlation is significant or not. By means of the proposed A-DXA coefficient conducted over the asymmetry for California electricity market, we found that the asymmetry between the prices and loads is not significant for daily average data in 1999 yr market (before electricity crisis) but extremely significant for those in 2000 yr market (during the crisis). To further uncover the difference of asymmetry between the years 1999 and 2000, a modified H statistic (MH) and ΔMH statistic are proposed. One of the present contributions is that the high MH values calculated for hourly data exist in majority months in 2000 market. Another important conclusion is that the cross-correlation with downwards dominates over the whole 1999 yr in contrast to the cross-correlation with upwards dominates over the 2000 yr.
Wang, Fang
2016-06-01
In order to detect and quantify asymmetry of two time series, a novel cross-correlation coefficient is proposed based on recent asymmetric detrended cross-correlation analysis (A-DXA), which we called A-DXA coefficient. The A-DXA coefficient, as an important extension of DXA coefficient ρ D X A , contains two directional asymmetric cross-correlated indexes, describing upwards and downwards asymmetric cross-correlations, respectively. By using the information of directional covariance function of two time series and directional variance function of each series itself instead of power-law between the covariance function and time scale, the proposed A-DXA coefficient can well detect asymmetry between the two series no matter whether the cross-correlation is significant or not. By means of the proposed A-DXA coefficient conducted over the asymmetry for California electricity market, we found that the asymmetry between the prices and loads is not significant for daily average data in 1999 yr market (before electricity crisis) but extremely significant for those in 2000 yr market (during the crisis). To further uncover the difference of asymmetry between the years 1999 and 2000, a modified H statistic (MH) and ΔMH statistic are proposed. One of the present contributions is that the high MH values calculated for hourly data exist in majority months in 2000 market. Another important conclusion is that the cross-correlation with downwards dominates over the whole 1999 yr in contrast to the cross-correlation with upwards dominates over the 2000 yr.
Zhao, Jinping; Cao, Yong; Wang, Xin
2018-06-01
In order to study the temporal variations of correlations between two time series, a running correlation coefficient (RCC) could be used. An RCC is calculated for a given time window, and the window is then moved sequentially through time. The current calculation method for RCCs is based on the general definition of the Pearson product-moment correlation coefficient, calculated with the data within the time window, which we call the local running correlation coefficient (LRCC). The LRCC is calculated via the two anomalies corresponding to the two local means, meanwhile, the local means also vary. It is cleared up that the LRCC reflects only the correlation between the two anomalies within the time window but fails to exhibit the contributions of the two varying means. To address this problem, two unchanged means obtained from all available data are adopted to calculate an RCC, which is called the synthetic running correlation coefficient (SRCC). When the anomaly variations are dominant, the two RCCs are similar. However, when the variations of the means are dominant, the difference between the two RCCs becomes obvious. The SRCC reflects the correlations of both the anomaly variations and the variations of the means. Therefore, the SRCCs from different time points are intercomparable. A criterion for the superiority of the RCC algorithm is that the average value of the RCC should be close to the global correlation coefficient calculated using all data. The SRCC always meets this criterion, while the LRCC sometimes fails. Therefore, the SRCC is better than the LRCC for running correlations. We suggest using the SRCC to calculate the RCCs.
Ma, Wanling; Li, Na; Zhao, Weiwei; Ren, Jing; Wei, Mengqi; Yang, Yong; Wang, Yingmei; Fu, Xin; Zhang, Zhuoli; Larson, Andrew C; Huan, Yi
2016-01-01
To clarify diffusion and perfusion abnormalities and evaluate correlation between apparent diffusion coefficient (ADC), MR perfusion and histopathologic parameters of pancreatic cancer (PC). Eighteen patients with PC underwent diffusion-weighted imaging and dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI). Parameters of DCE-MRI and ADC of cancer and non-cancerous tissue were compared. Correlation between the rate constant that represents transfer of contrast agent from the arterial blood into the extravascular extracellular space (K, volume of the extravascular extracellular space per unit volume of tissue (Ve), and ADC of PC and histopathologic parameters were analyzed. The rate constant that represents transfer of contrast agent from the extravascular extracellular space into blood plasma, K, tissue volume fraction occupied by vascular space, and ADC of PC were significantly lower than nontumoral pancreases. Ve of PC was significantly higher than that of nontumoral pancreas. Apparent diffusion coefficient and K values of PC were negatively correlated to fibrosis content and fibroblast activation protein staining score. Fibrosis content was positively correlated to Ve. Apparent diffusion coefficient values and parameters of DCE-MRI can differentiate PC from nontumoral pancreases. There are correlations between ADC, K, Ve, and fibrosis content of PC. Fibroblast activation protein staining score of PC is negatively correlated to ADC and K. Apparent diffusion coefficient, K, and Ve may be feasible to predict prognosis of PC.
Directory of Open Access Journals (Sweden)
İsmail Hakkı ERTEN
2008-10-01
Full Text Available This study aims to compare the appropriateness of two statistical procedures for measuring the effectiveness of vocabulary learning strategies: percentages and correlation coefficients. To do this a group of 20 learners of English were asked to study 12 words in a written list, with their pronunciations, dictionary definitions, and example sentences. Data was collected through introspection where students were asked to verbalize their mental processes as they studied the target words. A pre-test and post-test were given to measure the task achievement. The qualitative data was transcribed verbatim and content-analysed for tokens of strategy use as well as by noting whether each use of strategies led to successful recall of the words on which they were used. To calculate the strategy effectiveness, both simple percentage calculation and correlation coefficients were employed for comparison. The findings indicated that percentage calculation can give a more realistic picture of strategy effectiveness than correlation coefficients.
Correlated linear response calculations of the C6 dispersion coefficients of hydrogen halides
Czech Academy of Sciences Publication Activity Database
Sauer, S. P. A.; Paidarová, Ivana
2007-01-01
Roč. 3, 2-4 (2007), s. 399-421 ISSN 1574-0404 R&D Projects: GA AV ČR IAA401870702 Institutional research plan: CEZ:AV0Z40400503 Keywords : hydrogen halides * C6 dospersion coefficients * van der Waals coefficients * polarizability at imaginary frequences * SOPPA Subject RIV: CF - Physical ; Theoretical Chemistry
Lee, Kyoung Min; Lee, Jaebong; Chung, Chin Youb; Ahn, Soyeon; Sung, Ki Hyuk; Kim, Tae Won; Lee, Hui Jong; Park, Moon Seok
2012-06-01
Intra-class correlation coefficients (ICCs) provide a statistical means of testing the reliability. However, their interpretation is not well documented in the orthopedic field. The purpose of this study was to investigate the use of ICCs in the orthopedic literature and to demonstrate pitfalls regarding their use. First, orthopedic articles that used ICCs were retrieved from the Pubmed database, and journal demography, ICC models and concurrent statistics used were evaluated. Second, reliability test was performed on three common physical examinations in cerebral palsy, namely, the Thomas test, the Staheli test, and popliteal angle measurement. Thirty patients were assessed by three orthopedic surgeons to explore the statistical methods testing reliability. Third, the factors affecting the ICC values were examined by simulating the data sets based on the physical examination data where the ranges, slopes, and interobserver variability were modified. Of the 92 orthopedic articles identified, 58 articles (63%) did not clarify the ICC model used, and only 5 articles (5%) described all models, types, and measures. In reliability testing, although the popliteal angle showed a larger mean absolute difference than the Thomas test and the Staheli test, the ICC of popliteal angle was higher, which was believed to be contrary to the context of measurement. In addition, the ICC values were affected by the model, type, and measures used. In simulated data sets, the ICC showed higher values when the range of data sets were larger, the slopes of the data sets were parallel, and the interobserver variability was smaller. Care should be taken when interpreting the absolute ICC values, i.e., a higher ICC does not necessarily mean less variability because the ICC values can also be affected by various factors. The authors recommend that researchers clarify ICC models used and ICC values are interpreted in the context of measurement.
Directory of Open Access Journals (Sweden)
Ze-Hong Fu
2017-08-01
Full Text Available Objective: To study the correlation of MRI apparent diffusion coefficient (ADC value of invasive breast cancer with tumor tissue growth and angiogenesis. Methods: Patients with breast mass who were treated in Wuhan No. 6 Hospital between March 2014 and May 2017 were selected as the research subjects and divided into group A with invasive ductal carcinoma, group B with intraductal carcinoma and group C with benign lesion according to the biopsy results, magnetic resonance diffusion-weighted imaging was conducted to determine ADC values, and biopsy tissue was taken to determine the expression of proliferation genes and angiogenesis genes. Results: USP39, CyclinD1, VEGF, bFGF, Angplt-2, Angplt-3 and Angplt-4 protein expression levels in lesions of group A and group B were significantly higher than those of group C while ADC value as well as ALEX1 and Bax protein expression levels were significantly lower than those of group C; USP39, CyclinD1, VEGF, bFGF, Angplt-2, Angplt-3 and Angplt-4 protein expression levels in lesions of group A were significantly higher than those of group B while ADC value as well as ALEX1 and Bax protein expression levels was significantly lower than those of group B; USP39, CyclinD1, VEGF, bFGF, Angplt-2, Angplt-3 and Angplt-4 protein expression levels in invasive breast cancer tissue with high ADC value were significantly lower than those in invasive breast cancer tissue with low ADC value while ALEX1 and Bax protein expression levels were significantly higher than those in invasive breast cancer tissue with low ADC value. Conclusion: The decrease of ADC value of invasive breast cancer is closely related to cancer cell proliferation and angiogenesis.
Directory of Open Access Journals (Sweden)
Bahman Navidshad
2012-02-01
Full Text Available The applications of conventional culture-dependent assays to quantify bacteria populations are limited by their dependence on the inconsistent success of the different culture-steps involved. In addition, some bacteria can be pathogenic or a source of endotoxins and pose a health risk to the researchers. Bacterial quantification based on the real-time PCR method can overcome the above-mentioned problems. However, the quantification of bacteria using this approach is commonly expressed as absolute quantities even though the composition of samples (like those of digesta can vary widely; thus, the final results may be affected if the samples are not properly homogenized, especially when multiple samples are to be pooled together before DNA extraction. The objective of this study was to determine the correlation coefficients between four different methods of expressing the output data of real-time PCR-based bacterial quantification. The four methods were: (i the common absolute method expressed as the cell number of specific bacteria per gram of digesta; (ii the Livak and Schmittgen, ΔΔCt method; (iii the Pfaffl equation; and (iv a simple relative method based on the ratio of cell number of specific bacteria to the total bacterial cells. Because of the effect on total bacteria population in the results obtained using ΔCt-based methods (ΔΔCt and Pfaffl, these methods lack the acceptable consistency to be used as valid and reliable methods in real-time PCR-based bacterial quantification studies. On the other hand, because of the variable compositions of digesta samples, a simple ratio of cell number of specific bacteria to the corresponding total bacterial cells of the same sample can be a more accurate method to quantify the population.
Cross correlation coefficients of turbulent boundary layer with micro-bubble injection
International Nuclear Information System (INIS)
Claudia del Carmen Gutierrez-Torres; Yassin A Hassan; Jose Alfredo Jimenez-Bernal
2005-01-01
Full text of publication follows: Injection of micro-bubbles within the turbulent boundary layer has been investigated for a several years as a method to achieve drag reduction. However, the physical mechanism of this phenomenon is not fully understood yet. Experiments in a channel flow for single phase (water) and two phase (water and micro-bubbles) flows under different void fraction conditions are reported for a Reynolds number of 5128. Particle Image Velocimetry technique is used to measure instantaneous velocity fields. Consequently the cross-correlation coefficient Ruv can be calculated along the stream-wise direction for various different y + positions and along the normal direction for the fluctuating components of the velocity obtained from the instantaneous velocity fields. The experiments were carried out in a rectangular acrylic channel, whose dimensions are 4.8 m length, 20.6 cm wide and 5.6 cm height. Water was driven trough the channel by gravity from a tank, which was located 3 m above the channel. Then, water was conducted to a lower tank; from which water was pumped to the upper thank forming a closed loop. Upper tank's water level was kept constant through the tests to ensure constant flow rate trough the channel. The velocity field in the x-y plane was obtained by particle image velocimetry (PIV) at 3.15 m downstream from the channel inlet. A Nd:YAG laser with a wavelength of 532 nm (green light) and power of 350 mJ per pulse is utilized. The particles used for seeding have a diameter that goes from 6-9 μm with a specific gravity almost identical to water s specific gravity. The laser light scattered from the seeding particles was recorded using a CCD Kodak Megaplus camera, Model ES 1.0, 1008 x 1018 pixels. The viewing area was 1.28 cm 2 and was located close to the channel wall. The system recorded 30 velocity fields per second. Each velocity field was obtained from a pair of consecutive images capturing the second image of the pair 1 ms after
Cross correlation coefficients of turbulent boundary layer with micro-bubble injection
Energy Technology Data Exchange (ETDEWEB)
Claudia del Carmen Gutierrez-Torres [LABINTHAP-SEPI-ESIME, Instituto Politecnico Nacional, U.P. Adolfo Lopez Mateos Edif. 5 3er. Piso, Col Lindavista, C.P. 07738, Mexico, D. F. (Mexico); Yassin A Hassan; Jose Alfredo Jimenez-Bernal [Texas A and M University, College Station, Tx. 77843-3133 (United States)
2005-07-01
Full text of publication follows: Injection of micro-bubbles within the turbulent boundary layer has been investigated for a several years as a method to achieve drag reduction. However, the physical mechanism of this phenomenon is not fully understood yet. Experiments in a channel flow for single phase (water) and two phase (water and micro-bubbles) flows under different void fraction conditions are reported for a Reynolds number of 5128. Particle Image Velocimetry technique is used to measure instantaneous velocity fields. Consequently the cross-correlation coefficient Ruv can be calculated along the stream-wise direction for various different y{sup +} positions and along the normal direction for the fluctuating components of the velocity obtained from the instantaneous velocity fields. The experiments were carried out in a rectangular acrylic channel, whose dimensions are 4.8 m length, 20.6 cm wide and 5.6 cm height. Water was driven trough the channel by gravity from a tank, which was located 3 m above the channel. Then, water was conducted to a lower tank; from which water was pumped to the upper thank forming a closed loop. Upper tank's water level was kept constant through the tests to ensure constant flow rate trough the channel. The velocity field in the x-y plane was obtained by particle image velocimetry (PIV) at 3.15 m downstream from the channel inlet. A Nd:YAG laser with a wavelength of 532 nm (green light) and power of 350 mJ per pulse is utilized. The particles used for seeding have a diameter that goes from 6-9 {mu}m with a specific gravity almost identical to water s specific gravity. The laser light scattered from the seeding particles was recorded using a CCD Kodak Megaplus camera, Model ES 1.0, 1008 x 1018 pixels. The viewing area was 1.28 cm{sup 2} and was located close to the channel wall. The system recorded 30 velocity fields per second. Each velocity field was obtained from a pair of consecutive images capturing the second image of
Collett, B; Bateman, F; Bauder, W K; Byrne, J; Byron, W A; Chen, W; Darius, G; DeAngelis, C; Dewey, M S; Gentile, T R; Hassan, M T; Jones, G L; Komives, A; Laptev, A; Mendenhall, M P; Nico, J S; Noid, G; Park, H; Stephenson, E J; Stern, I; Stockton, K J S; Trull, C; Wietfeldt, F E; Yerozolimsky, B G
2017-08-01
We describe an apparatus used to measure the electron-antineutrino angular correlation coefficient in free neutron decay. The apparatus employs a novel measurement technique in which the angular correlation is converted into a proton time-of-flight asymmetry that is counted directly, avoiding the need for proton spectroscopy. Details of the method, apparatus, detectors, data acquisition, and data reduction scheme are presented, along with a discussion of the important systematic effects.
Spatial correlation in 3D MIMO channels using fourier coefficients of power spectrums
Nadeem, Qurrat-Ul-Ain; Kammoun, Abla; Debbah, Mé rouane; Alouini, Mohamed-Slim
2015-01-01
for arbitrary angular distributions and antenna patterns. The resulting expression depends on the underlying angular distributions and antenna patterns through the Fourier Series (FS) coefficients of power azimuth and elevation spectrums. The novelty
DEFF Research Database (Denmark)
Christensen, Eva Arnspang; Koffman, Jennifer Skaarup; Marlar, Saw
2014-01-01
Lateral diffusion and compartmentalization of plasma membrane proteins are tightly regulated in cells and thus, studying these processes will reveal new insights to plasma membrane protein function and regulation. Recently, k-Space Image Correlation Spectroscopy (kICS)1 was developed to enable...... routine measurements of diffusion coefficients directly from images of fluorescently tagged plasma membrane proteins, that avoided systematic biases introduced by probe photophysics. Although the theoretical basis for the analysis is complex, the method can be implemented by nonexperts using a freely...... to the correlation function yields the diffusion coefficient. This paper provides a step-by-step guide to the image analysis and measurement of diffusion coefficients via kICS. First, a high frame rate image sequence of a fluorescently labeled plasma membrane protein is acquired using a fluorescence microscope Then...
Directory of Open Access Journals (Sweden)
Shengming Deng
2017-01-01
Full Text Available The objective of this meta-analysis is to explore the correlation between the apparent diffusion coefficient (ADC on diffusion-weighted MR and the standard uptake value (SUV of 18F-FDG on PET/CT in patients with cancer. Databases such as PubMed (MEDLINE included, EMBASE, and Cochrane Database of Systematic Review were searched for relevant original articles that explored the correlation between SUV and ADC in English. After applying Fisher’s r-to-z transformation, correlation coefficient (r values were extracted from each study and 95% confidence intervals (CIs were calculated. Sensitivity and subgroup analyses based on tumor type were performed to investigate the potential heterogeneity. Forty-nine studies were eligible for the meta-analysis, comprising 1927 patients. Pooled r for all studies was −0.35 (95% CI: −0.42–0.28 and exhibited a notable heterogeneity (I2 = 78.4%; P < 0.01. In terms of the cancer type subgroup analysis, combined correlation coefficients of ADC/SUV range from −0.12 (lymphoma, n = 5 to −0.59 (pancreatic cancer, n = 2. We concluded that there is an average negative correlation between ADC and SUV in patients with cancer. Higher correlations were found in the brain tumor, cervix carcinoma, and pancreas cancer. However, a larger, prospective study is warranted to validate these findings in different cancer types.
Deng, Shengming; Wu, Zhifang; Wu, Yiwei; Zhang, Wei; Li, Jihui; Dai, Na; Zhang, Bin; Yan, Jianhua
2017-01-01
The objective of this meta-analysis is to explore the correlation between the apparent diffusion coefficient (ADC) on diffusion-weighted MR and the standard uptake value (SUV) of 18 F-FDG on PET/CT in patients with cancer. Databases such as PubMed (MEDLINE included), EMBASE, and Cochrane Database of Systematic Review were searched for relevant original articles that explored the correlation between SUV and ADC in English. After applying Fisher's r -to- z transformation, correlation coefficient ( r ) values were extracted from each study and 95% confidence intervals (CIs) were calculated. Sensitivity and subgroup analyses based on tumor type were performed to investigate the potential heterogeneity. Forty-nine studies were eligible for the meta-analysis, comprising 1927 patients. Pooled r for all studies was -0.35 (95% CI: -0.42-0.28) and exhibited a notable heterogeneity ( I 2 = 78.4%; P correlation coefficients of ADC/SUV range from -0.12 (lymphoma, n = 5) to -0.59 (pancreatic cancer, n = 2). We concluded that there is an average negative correlation between ADC and SUV in patients with cancer. Higher correlations were found in the brain tumor, cervix carcinoma, and pancreas cancer. However, a larger, prospective study is warranted to validate these findings in different cancer types.
Pellis, E.P.M.; Franssen-Hal, van N.L.W.; Burema, J.; Keijer, J.
2003-01-01
We show that the intraclass correlation coefficient (ICC) can be used as a relatively simple statistical measure to assess methodological and biological variation in DNA microarray analysis. The ICC is a measure that determines the reproducibility of a variable, which can easily be calculated from
Directory of Open Access Journals (Sweden)
Hamid Reza Bahrami
2007-01-01
Full Text Available The ergodic capacity of MIMO frequency-flat and -selective channels depends greatly on the eigenvalue distribution of spatial correlation matrices. Knowing the eigenstructure of correlation matrices at the transmitter is very important to enhance the capacity of the system. This fact becomes of great importance in MIMO wireless systems where because of the fast changing nature of the underlying channel, full channel knowledge is difficult to obtain at the transmitter. In this paper, we first investigate the effect of eigenvalues distribution of spatial correlation matrices on the capacity of frequency-flat and -selective channels. Next, we introduce a practical scheme known as linear precoding that can enhance the ergodic capacity of the channel by changing the eigenstructure of the channel by applying a linear transformation. We derive the structures of precoders using eigenvalue decomposition and linear algebra techniques in both cases and show their similarities from an algebraic point of view. Simulations show the ability of this technique to change the eigenstructure of the channel, and hence enhance the ergodic capacity considerably.
International Nuclear Information System (INIS)
Krewski, D.; Gaylor, D.W.; Soms, A.P.; Szyszkowicz, M.
1993-01-01
Current practice in carcinogen bioassay calls for exposure of experimental animals at doses up to and including the maximum tolerated dose (MTD). Such studies have been used to compute measures of carcinogenic potency such as the TD 50 as well as unit risk factors such as q 1 for predicting low-dose risks. Recent studies have indicated that these measures of carcinogenic potency are highly correlated with the MTD. Carcinogenic potency has also been shown to be correlated with indicators of mutagenicity and toxicity. Correlation of the MTDs for rats and mice implies a corresponding correlation in TD 50 values for these two species. The implications of these results for cancer risk assessment are examined in light of the large variation in potency among chemicals known to induce tumors in rodents. 119 refs., 2 figs., 4 tabs
Nakagawa, Shinichi; Johnson, Paul C D; Schielzeth, Holger
2017-09-01
The coefficient of determination R 2 quantifies the proportion of variance explained by a statistical model and is an important summary statistic of biological interest. However, estimating R 2 for generalized linear mixed models (GLMMs) remains challenging. We have previously introduced a version of R 2 that we called [Formula: see text] for Poisson and binomial GLMMs, but not for other distributional families. Similarly, we earlier discussed how to estimate intra-class correlation coefficients (ICCs) using Poisson and binomial GLMMs. In this paper, we generalize our methods to all other non-Gaussian distributions, in particular to negative binomial and gamma distributions that are commonly used for modelling biological data. While expanding our approach, we highlight two useful concepts for biologists, Jensen's inequality and the delta method, both of which help us in understanding the properties of GLMMs. Jensen's inequality has important implications for biologically meaningful interpretation of GLMMs, whereas the delta method allows a general derivation of variance associated with non-Gaussian distributions. We also discuss some special considerations for binomial GLMMs with binary or proportion data. We illustrate the implementation of our extension by worked examples from the field of ecology and evolution in the R environment. However, our method can be used across disciplines and regardless of statistical environments. © 2017 The Author(s).
Directory of Open Access Journals (Sweden)
G. M. Abdurakhmanov
2013-01-01
Full Text Available Abstract. Statistical data from "Indicators of health status of the Republic of Dagestan" for 1999 - 2010 years are presented in the work. The aim of this work was to identify a cause-effect correlation between non-communicable diseases (ischemic heart disease, neuropsychiatric disease, endemic goiter, diabetes, congenital anomalies and environmental factors in the Republic of Dagestan.Statistical data processing was carried out using the software package Statistica, Microsoft Excel. The Spearman rank correlation coefficient (ρ was used for identify of correlation between indicators of environmental quality and health of population.Moderate positive correlation is observed between the development of pathology and excess of concentrations of contaminants in drinking water sources. Direct correlations are founded between development of the studied pathologies and excess of concentrations of heavy metals and their mobile forms in soils of the region. Direct correlation is found between excess of concentrations of heavy metals in the pasture vegetation (factorial character and the morbidity of the population (effective character.
Lakin, B A; Grasso, D J; Shah, S S; Stewart, R C; Bansal, P N; Freedman, J D; Grinstaff, M W; Snyder, B D
2013-01-01
The aim of this study is to evaluate whether contrast-enhanced computed tomography (CECT) attenuation, using a cationic contrast agent (CA4+), correlates with the equilibrium compressive modulus (E) and coefficient of friction (μ) of ex vivo bovine articular cartilage. Correlations between CECT attenuation and E (Group 1, n = 12) and μ (Group 2, n = 10) were determined using 7 mm diameter bovine osteochondral plugs from the stifle joints of six freshly slaughtered, skeletally mature cows. The equilibrium compressive modulus was measured using a four-step, unconfined, compressive stress-relaxation test, and the coefficients of friction were determined from a torsional friction test. Following mechanical testing, samples were immersed in CA4+, imaged using μCT, rinsed, and analyzed for glycosaminoglycan (GAG) content using the 1,9-dimethylmethylene blue (DMMB) assay. The CECT attenuation was positively correlated with the GAG content of bovine cartilage (R(2) = 0.87, P coefficients of friction: CECT vs μ(static) (R(2) = 0.71, P = 0.002), CECT vs μ(static_equilibrium) (R(2) = 0.79, P coefficient of friction. Copyright © 2012 Osteoarthritis Research Society International. Published by Elsevier Ltd. All rights reserved.
On the Construction of Bivariate Exponential Distributions with an Arbitrary Correlation Coefficient
DEFF Research Database (Denmark)
Bladt, Mogens; Nielsen, Bo Friis
2010-01-01
coefficient (also negative). Secondly, the class satisfies that any linear combination (projection) of the marginal random variables is a phase-type distribution. The latter property is partially important for the development of hypothesis testing in linear models. Finally, it is easy to simulate...
De Mezquia, D Alonso; Bou-Ali, M Mounir; Larrañaga, M; Madariaga, J A; Santamaría, C
2012-03-08
In this work we have measured the molecular diffusion coefficient of the n-alkane binary series nC(i)-nC(6), nC(i)-nC(10), and nC(i)-nC(12) at 298 K and 1 atm and a mass fraction of 0.5 by using the so-called sliding symmetric tubes technique. The results show that the diffusion coefficient at this concentration is proportional to the inverse viscosity of the mixture. In addition, we have also measured the diffusion coefficient of the systems nC(12)-nC(6), nC(12)-nC(7), and nC(12)-nC(8) as a function of concentration. From the data obtained, it is shown that the diffusion coefficient of the n-alkane binary mixtures at any concentration can be calculated from the molecular weight of the components and the dynamic viscosity of the corresponding mixture at 50% mass fraction.
Correlation of patient maximum skin doses in cardiac procedures with various dose indicators
International Nuclear Information System (INIS)
Domienik, J.; Papierz, S.; Jankowski, J.; Peruga, J.Z.; Werduch, A.; Religa, W.
2008-01-01
In most countries of European Union, legislation requires the determination of the total skin dose received by patients during interventional procedures in order to prevent deterministic damages. Various dose indicators like dose-area product (DAP), cumulative dose (CD) and entrance dose at the patient plane (EFD) are used for patient dosimetry purposes in clinical practice. This study aimed at relating those dose indicators with doses ascribed to the most irradiated areas of the patient skin usually expressed in terms of local maximal skin dose (MSD). The study was performed in two different facilities for two most common cardiac procedures coronary angiography (CA) and percutaneous coronary interventions (PCI). For CA procedures, the registered values of fluoroscopy time, total DAP and MSD were in the range (0.7-27.3) min, (16-317) Gy cm 2 and (43-1507) mGy, respectively, and for interventions, accordingly (2.1-43.6) min, (17-425) Gy cm 2 , (71-1555) mGy. Moreover, for CA procedures, CD and EFD were in the ranges (295-4689) mGy and (121-1768) mGy and for PCI (267-6524) mGy and (68-2279) mGy, respectively. No general and satisfactory correlation was found for safe estimation of MSD. However, results show that the best dose indicator which might serve for rough, preliminary estimation is DAP value. In the study, the appropriate trigger levels were proposed for both facilities. (authors)
International Nuclear Information System (INIS)
Maisonobe, Romain
2014-01-01
Neutron β-decay is parametrized by several measurable correlation coefficients which are used to determine parameters of the Standard Model and to search for new physics. The aim of the retardation spectrometer aSPECT is to measure the electron-antineutrino angular correlation coefficient a with an unprecedented accuracy of well below 1%. The coefficient is extracted from a high precision measurement of the proton energy spectrum. A central point of this PhD thesis is the analysis of the background, motivated by the observations of discharges during the beam time of 2011, and an earlier indication for a dependence on the retardation potential. During this thesis, several measurements were conducted off-line, without ionizing particles from neutron decay. An 'internal' background (X-rays and ions) was identified. It has an influence of 10 -5 to 10 -4 on Δa/a depending on the vacuum level (∼10 -9 mbar) and the spectrometer settings. Within the analysis of the data from the beam time in 2013, a model was built to correct for backgrounds present in neutron decay experiment, taking into account its time dependence. The correction is about 3% on the coefficient for standard settings and vacuum but it can reach 7% for unfavorable settings. To reduce the background, a drift electric field was applied close to the maximum of the retardation potential. Additional measurements performed during this beam time included tests of systematics, in particular the edge effect (beam profile) and different electrode settings. In order to obtain the final result, the analysis has to be extended by including the different corrections and by comparing with simulations of the systematic effects. (author)
Discharge coefficient correlations for circular-arc venturi flowmeters at critical /sonic/ flow
Arnberg, B. T.; Britton, C. L.; Seidl, W. F.
1973-01-01
Experimental data are analyzed to support theoretical predictions for discharge coefficients in circular-arc venturi flow meters operating in the critical sonic flow regime at throat Reynolds numbers above 150 thousand. The data tend to verify the predicted 0.25% decrease in the discharge coefficient during transition from a laminar to turbulent boundary layer. Four different test gases and three flow measurement facilities were used in the experiments with 17 venturis with throat sizes from 0.15 to 1.37 in. and Beta ratios ranging from 0.014 to 0.25. Recommendations are given as to how the effectiveness of future studies in the field could be improved.
Lipid–water partition coefficients and correlations with uptakes by algae of organic compounds
International Nuclear Information System (INIS)
Hung, Wei-Nung; Chiou, Cary T.; Lin, Tsair-Fuh
2014-01-01
Graphical abstract: - Highlights: • Partition coefficients of contaminants with lipid triolein (K tw ) are measured. • Measured K tw values are nearly the same as the respective K ow . • Sorption of the contaminants to a dry algal powder is similarly measured. • Algal uptake of a compound occurs primarily by partition into the algal lipid. - Abstract: In view of the scarcity of the lipid–water partition coefficients (K tw ) for organic compounds, the log K tw values for many environmental contaminants were measured using ultra-pure triolein as the model lipid. Classes of compounds studied include alkyl benzenes, halogenated benzenes, short-chain chlorinated hydrocarbons, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, and organochlorine pesticides. In addition to log K tw determination, the uptakes of these compounds from water by a dry algal species were measured to evaluate the lipid effect on the algal uptake. The measured log K tw are closely related to their respective log K ow (octanol–water), with log K ow = 1.9 to 6.5. A significant difference is observed between the present and early measured log K tw for compounds with log K ow > ∼5, which is attributed to the presence and absence of a triolein microemulsion in water affecting the solute partitioning. The observed lipid-normalized algae–water distribution coefficients (log K aw/lipid ) are virtually identical to the respective log K tw values, which manifests the dominant lipid-partition effect of the compounds with algae
International Nuclear Information System (INIS)
Artursson, P.; Karlsson, J.
1991-01-01
Monolayers of a well differentiated human intestinal epithelial cell line, Caco-2, were used as a model to study passive drug absorption across the intestinal epithelium. Absorption rate constants (expressed as apparent permeability coefficients) were determined for 20 drugs and peptides with different structural properties. The permeability coefficients ranged from approximately 5 x 10 - 8 to 5 x 10 - 5 cm/s. A good correlation was obtained between data on oral absorption in humans and the results in the Caco-2 model. Drugs that are completely absorbed in humans had permeability coefficients greater than 1 x 10 - 6 cm/s. Drugs that are absorbed to greater than 1% but less than 100% had permeability coefficients of 0.1-1.0 x 10 - 6 cm/s while drugs and peptides that are absorbed to less than 1% had permeability coefficients of less than or equal to 1 x 10 - 7 cm/s. The results indicate that Caco-2 monolayers can be used as a model for studies on intestinal drug absorption
Drabik, Dominik; Przybyło, Magda; Sikorski, Aleksander; Langner, Marek
2016-03-01
Fluorescence Correlation Spectroscopy (FCS) is a technique, which allows determination of the diffusion coefficient and concentration of fluorescent objects suspended in the solution. The measured parameter is the fluctuation of the fluorescence signal emitted by diffusing molecules. When 100 nm DOPC vesicles labeled with various fluorescent dyes (Fluorescein-PE, NBD-PE, Atto488 DOPE or βBodipy FL) were measured, different values of diffusion coefficients have been obtained. These diffusion coefficients were different from the expected values measured using the dynamic light scattering method (DLS). The FCS was initially developed for solutions containing small fluorescent molecules therefore the observed inconsistency may result from the nature of vesicle suspension itself. The duration of the fluorescence signal may depend on the following factors: the exposure time of the labeled object to the excitation beam, the photo-physical properties (e.g., stability) of a fluorophore, the theoretical model used for the calculations of the diffusion coefficient and optical properties of the vesicle suspension. The diffusion coefficients determined for differently labeled liposomes show that its dependence on vesicle size and quantity of fluorescent probed used for labeling was significant demonstrating that the fluorescence properties of the fluorophore itself (bleaching and/or blinking) were critical factors for a correct outcome of FCS experiment. The new, based on combined FCS and DLS measurements, method for the determination of the focal volume prove itself to be useful for the evaluation of a fluorescence dye with respect to its applicability for FCS experiment.
Wan, Renzhi; Zu, Yunxiao; Shao, Lin
2018-04-01
The blood echo signal maintained through Medical ultrasound Doppler devices would always include vascular wall pulsation signal .The traditional method to de-noise wall signal is using high-pass filter, which will also remove the lowfrequency part of the blood flow signal. Some scholars put forward a method based on region selective reduction, which at first estimates of the wall pulsation signals and then removes the wall signal from the mixed signal. Apparently, this method uses the correlation between wavelet coefficients to distinguish blood signal from wall signal, but in fact it is a kind of wavelet threshold de-noising method, whose effect is not so much ideal. In order to maintain a better effect, this paper proposes an improved method based on wavelet coefficient correlation to separate blood signal and wall signal, and simulates the algorithm by computer to verify its validity.
Jiang, Fan; Ding, Wei
2010-10-01
A previously published new rotation function has been improved by using a dynamic correlation coefficient as well as two new scoring functions of relative entropy and mean-square-residues to make the rotation function more robust and independent of a specific set of weights for scoring and ranking. The previously described new rotation function calculates the rotation function of molecular replacement by matching the search model directly with the Patterson vector map. The signal-to-noise ratio for the correct match was increased by averaging all the matching peaks. Several matching scores were employed to evaluate the goodness of matching. These matching scores were then combined into a single total score by optimizing a set of weights using the linear regression method. It was found that there exists an optimal set of weights that can be applied to the global rotation search and the correct solution can be ranked in the top 100 or less. However, this set of optimal weights in general is dependent on the search models and the crystal structures with different space groups and cell parameters. In this work, we try to solve this problem by designing a dynamic correlation coefficient. It is shown that the dynamic correlation coefficient works for a variety of space groups and cell parameters in the global search of rotation function. We also introduce two new matching scores: relative entropy and mean-square-residues. Last but not least, we discussed a valid method for the optimization of the adjustable parameters for matching vectors.
Wu, Zi Yi; Xie, Ping; Sang, Yan Fang; Gu, Hai Ting
2018-04-01
The phenomenon of jump is one of the importantly external forms of hydrological variabi-lity under environmental changes, representing the adaption of hydrological nonlinear systems to the influence of external disturbances. Presently, the related studies mainly focus on the methods for identifying the jump positions and jump times in hydrological time series. In contrast, few studies have focused on the quantitative description and classification of jump degree in hydrological time series, which make it difficult to understand the environmental changes and evaluate its potential impacts. Here, we proposed a theatrically reliable and easy-to-apply method for the classification of jump degree in hydrological time series, using the correlation coefficient as a basic index. The statistical tests verified the accuracy, reasonability, and applicability of this method. The relationship between the correlation coefficient and the jump degree of series were described using mathematical equation by derivation. After that, several thresholds of correlation coefficients under different statistical significance levels were chosen, based on which the jump degree could be classified into five levels: no, weak, moderate, strong and very strong. Finally, our method was applied to five diffe-rent observed hydrological time series, with diverse geographic and hydrological conditions in China. The results of the classification of jump degrees in those series were closely accorded with their physically hydrological mechanisms, indicating the practicability of our method.
Rakheja, Rajan; Chandarana, Hersh; DeMello, Linda; Jackson, Kimberly; Geppert, Christian; Faul, David; Glielmi, Christopher; Friedman, Kent P
2013-11-01
The purpose of this study was to assess the correlation between standardized uptake value (SUV) and apparent diffusion coefficient (ADC) of neoplastic lesions in the use of a simultaneous PET/MRI hybrid system. Twenty-four patients with known primary malignancies underwent FDG PET/CT. They then underwent whole-body PET/MRI. Diffusion-weighted imaging was performed with free breathing and a single-shot spin-echo echo-planar imaging sequence with b values of 0, 350, and 750 s/mm(2). Regions of interest were manually drawn along the contours of neoplastic lesions larger than 1 cm, which were clearly identified on PET and diffusion-weighted images. Maximum SUV (SUVmax) on PET/MRI and PET/CT images, mean SUV (SUVmean), minimum ADC (ADCmin), and mean ADC (ADCmean) were recorded on PET/MR images for each FDG-avid neoplastic soft-tissue lesion with a maximum of three lesions per patient. Pearson correlation coefficient was used to asses the following relations: SUVmax versus ADCmin on PET/MR and PET/CT images, SUVmean versus ADCmean, and ratio of SUVmax to mean liver SUV (SUV ratio) versus ADCmin. A subanalysis of patients with progressive disease versus partial treatment response was performed with the ratio of SUVmax to ADCmin for the most metabolically active lesion. Sixty-nine neoplastic lesions (52 nonosseous lesions, 17 bone metastatic lesions) were evaluated. The mean SUVmax from PET/MRI was 7.0 ± 6.0; SUVmean, 5.6 ± 4.6; mean ADCmin, 1.10 ± 0.58; and mean ADCmean, 1.48 ± 0.72. A significant inverse Pearson correlation coefficient was found between PET/MRI SUVmax and ADCmin (r = -0.21, p = 0.04), between SUVmean and ADCmean (r = -0.18, p = 0.07), and between SUV ratio and ADCmin (r = -0.27, p = 0.01). A similar inverse Pearson correlation coefficient was found between the PET/CT SUVmax and ADCmin. Twenty of 24 patients had previously undergone PET/CT; five patients had a partial treatment response, and six had progressive disease according to Response Evaluation
Lipid–water partition coefficients and correlations with uptakes by algae of organic compounds
Energy Technology Data Exchange (ETDEWEB)
Hung, Wei-Nung [Green Energy and Environment Research Laboratories, Industrial Technology Research Institute, Hsinchu 30011, Taiwan (China); Chiou, Cary T., E-mail: carychio@mail.ncku.edu.tw [Department of Environmental Engineering and Sustainable Environment Research Laboratory, National Cheng Kung University, Tainan 70101, Taiwan (China); U.S. Geological Survey, Denver Federal Center, Denver, CO 80225 (United States); Lin, Tsair-Fuh, E-mail: tflin@mail.ncku.edu.tw [Department of Environmental Engineering and Sustainable Environment Research Laboratory, National Cheng Kung University, Tainan 70101, Taiwan (China)
2014-08-30
Graphical abstract: - Highlights: • Partition coefficients of contaminants with lipid triolein (K{sub tw}) are measured. • Measured K{sub tw} values are nearly the same as the respective K{sub ow}. • Sorption of the contaminants to a dry algal powder is similarly measured. • Algal uptake of a compound occurs primarily by partition into the algal lipid. - Abstract: In view of the scarcity of the lipid–water partition coefficients (K{sub tw}) for organic compounds, the log K{sub tw} values for many environmental contaminants were measured using ultra-pure triolein as the model lipid. Classes of compounds studied include alkyl benzenes, halogenated benzenes, short-chain chlorinated hydrocarbons, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, and organochlorine pesticides. In addition to log K{sub tw} determination, the uptakes of these compounds from water by a dry algal species were measured to evaluate the lipid effect on the algal uptake. The measured log K{sub tw} are closely related to their respective log K{sub ow} (octanol–water), with log K{sub ow} = 1.9 to 6.5. A significant difference is observed between the present and early measured log K{sub tw} for compounds with log K{sub ow} > ∼5, which is attributed to the presence and absence of a triolein microemulsion in water affecting the solute partitioning. The observed lipid-normalized algae–water distribution coefficients (log K{sub aw/lipid}) are virtually identical to the respective log K{sub tw} values, which manifests the dominant lipid-partition effect of the compounds with algae.
Jameson, A. R.
1990-01-01
The relationship between the rainfall rate (R) obtained from radiometric brightness temperatures and the extinction coefficient (k sub e) is investigated by computing the values of k sub e over a wide range of rainfall rates, for frequencies from 3 to 25 GHz. The results show that the strength of the relation between the R and the k sub e values exhibits considerable variation for frequencies at this range. Practical suggestions are made concerning the selection of particular frequencies for rain measurements to minimize the error in R determinations.
Czech Academy of Sciences Publication Activity Database
Krištoufek, Ladislav
Roč. 406 , č. 1 (2014), s. 169-175 ISSN 0378-4371 R&D Projects: GA ČR(CZ) GP14-11402P Grant - others:GA ČR(CZ) GAP402/11/0948 Program:GA Institutional support: RVO:67985556 Keywords : correlations * econophysics * non-stationarity Subject RIV: AH - Economics Impact factor: 1.732, year: 2014 http://library.utia.cas.cz/separaty/2014/E/kristoufek-0433529.pdf
Surov, Alexey; Meyer, Hans Jonas; Wienke, Andreas
2017-08-29
The purpose of this meta-analysis was to provide clinical evidence regarding relationship between ADC and cellularity in different tumors based on large patient data. Medline library was screened for associations between ADC and cell count in different tumors up to September 2016. Only publications in English were extracted. The Preferred Reporting Items for Systematic Reviews and Meta-Analyses statement (PRISMA) was used for the research. Overall, 39 publications with 1530 patients were included into the analysis. The following data were extracted from the literature: authors, year of publication, number of patients, tumor type, and correlation coefficients. The pooled correlation coefficient for all studies was ρ = -0.56 (95 % CI = [-0.62; -0.50]),. Correlation coefficients ranged from ρ =-0.25 (95 % CI = [-0.63; 0.12]) in lymphoma to ρ=-0.66 (95 % CI = [-0.85; -0.47]) in glioma. Other coefficients were as follows: ovarian cancer, ρ = -0.64 (95% CI = [-0.76; -0.52]); lung cancer, ρ = -0.63 (95 % CI = [-0.78; -0.48]); uterine cervical cancer, ρ = -0.57 (95 % CI = [-0.80; -0.34]); prostatic cancer, ρ = -0.56 (95 % CI = [-0.69; -0.42]); renal cell carcinoma, ρ = -0.53 (95 % CI = [-0.93; -0.13]); head and neck squamous cell carcinoma, ρ = -0.53 (95 % CI = [-0.74; -0.32]); breast cancer, ρ = -0.48 (95 % CI = [-0.74; -0.23]); and meningioma, ρ = -0.45 (95 % CI = [-0.73; -0.17]).
CORRELATION COEFFICIENTS BETWEEN THE NUMBERS OF CATEGORIES TILLERS ON SIGNALGRASS PASTURE
Directory of Open Access Journals (Sweden)
Manoel Eduardo Rozalino Santos
2011-07-01
Full Text Available The understanding of relationship between the numbers of tillers categories allows the identification of compensatory mechanisms that ensure plants adaptation to grazing. Thus, this work was conducted to evaluate the associations between densities of various tillers categories in same Brachiaria decumbens pasture under continuous stocking with cattle. The tillers were measured with different growth sources, developmental stages, and defoliation and sizes levels in sites of same pasture with plants of 10, 20, 30 and 40 cm. Pearson linear correlation between the different tillers categories were estimated. The vegetative tillers number (VTN correlated positively with percentage of tillers with up to 20 cm. The response pattern opposite occurred with reproductive (RTN and dead (DTN tillers numbers. The correlations of number of leafless tillers were positive with the percentage of tillers with less than 20 cm and negative with the percentage of tillers with more than 20 cm. The VTN correlated positively with numbers of tillers with and without defoliation, and negatively with the RNT and DNT. The number of aerial tiller was positively correlated with the number of tillers without apical meristem. In B. decumbens pasture there are tradeoffs between percentage of longer tillers and VNT, between numbers of vegetative and leafless tillers, and between VNT and RNT.
Werner, Charles L.; Wegmueller, Urs; Small, David L.; Rosen, Paul A.
1994-01-01
Terrain slopes, which can be measured with Synthetic Aperture Radar (SAR) interferometry either from a height map or from the interferometric phase gradient, were used to calculate the local incidence angle and the correct pixel area. Both are required for correct thematic interpretation of SAR data. The interferometric correlation depends on the pixel area projected on a plane perpendicular to the look vector and requires correction for slope effects. Methods for normalization of the backscatter and interferometric correlation for ERS-1 SAR are presented.
Directory of Open Access Journals (Sweden)
Mahdi Alajmi
2015-07-01
Full Text Available The correlation between the mechanical properties of Fillers/Epoxy composites and their tribological behavior was investigated. Tensile, hardness, wear, and friction tests were conducted for Neat Epoxy (NE, Graphite/Epoxy composites (GE, and Data Palm Fiber/Epoxy with or without Graphite composites (GFE and FE. The correlation was made between the tensile strength, the modulus of elasticity, elongation at the break, and the hardness, as an individual or a combined factor, with the specific wear rate (SWR and coefficient of friction (COF of composites. In general, graphite as an additive to polymeric composite has had an eclectic effect on mechanical properties, whereas it has led to a positive effect on tribological properties, whilst date palm fibers (DPFs, as reinforcement for polymeric composite, promoted a mechanical performance with a slight improvement to the tribological performance. Statistically, this study reveals that there is no strong confirmation of any marked correlation between the mechanical and the specific wear rate of filler/Epoxy composites. There is, however, a remarkable correlation between the mechanical properties and the friction coefficient of filler/Epoxy composites.
Alajmi, Mahdi; Shalwan, Abdullah
2015-07-08
The correlation between the mechanical properties of Fillers/Epoxy composites and their tribological behavior was investigated. Tensile, hardness, wear, and friction tests were conducted for Neat Epoxy (NE), Graphite/Epoxy composites (GE), and Data Palm Fiber/Epoxy with or without Graphite composites (GFE and FE). The correlation was made between the tensile strength, the modulus of elasticity, elongation at the break, and the hardness, as an individual or a combined factor, with the specific wear rate (SWR) and coefficient of friction (COF) of composites. In general, graphite as an additive to polymeric composite has had an eclectic effect on mechanical properties, whereas it has led to a positive effect on tribological properties, whilst date palm fibers (DPFs), as reinforcement for polymeric composite, promoted a mechanical performance with a slight improvement to the tribological performance. Statistically, this study reveals that there is no strong confirmation of any marked correlation between the mechanical and the specific wear rate of filler/Epoxy composites. There is, however, a remarkable correlation between the mechanical properties and the friction coefficient of filler/Epoxy composites.
Yu, Xue; Lee, Elaine Yuen Phin; Lai, Vincent; Chan, Queenie
2014-07-01
To evaluate the correlation between standardized uptake value (SUV) (tissue metabolism) and apparent diffusion coefficient (ADC) (water diffusivity) in peritoneal metastases. Patients with peritoneal dissemination detected on (18)F-fluorodeoxyglucose positron emission tomography combined with computed tomography (FDG-PET/CT) were prospectively recruited for MRI examinations with informed consent and the study was approved by the local Institutional Review Board. FDG-PET/CT, diffusion-weighted imaging (DWI), MRI, and DWI/MRI images were independently reviewed by two radiologists based on visual analysis. SUVmax/SUVmean and ADCmin/ADCmean were obtained manually by drawing ROIs over the peritoneal metastases on FDG-PET/CT and DWI, respectively. Diagnostic characteristics of each technique were evaluated. Pearson's coefficient and McNemar and Kappa tests were used for statistical analysis. Eight patients were recruited for this prospective study and 34 peritoneal metastases were evaluated. ADCmean was significantly and negatively correlated with SUVmax (r = -0.528, P = 0.001) and SUVmean (r = -0.548, P = 0.001). ADCmin had similar correlation with SUVmax (r = -0.508, P = 0.002) and SUVmean (r = -0.513, P = 0.002). DWI/MRI had high diagnostic performance (accuracy = 98%) comparable to FDG-PET/CT, in peritoneal metastasis detection. Kappa values were excellent for all techniques. There was a significant inverse correlation between SUV and ADC. © 2013 Wiley Periodicals, Inc.
International Nuclear Information System (INIS)
Muhammad, T.; Haider, S.; Qureshi, M. J.; Shah, G. S.; Zamir, R.
2005-01-01
Yield and yield contributing traits were studied in candidate bread wheat lines to find out the genetic contribution of the different characters towards grain yield at NIFA, Peshawar during 2001-02. All the characteristics studied differed significantly from each other. Days to heading showed negative and significant correlation with harvest index and grain yield but was negative and non-significant with the biological yield. Days to maturity were negatively correlated at both genotypic and phenotypic levels with biological yield; harvest index and grain yield and level of correlations were significant with harvest index and grain yield. Plant height showed negative genotypic and phenotypic correlation with harvest index and grain yield. Biological yield had positive and significant genotypic and phenotypic correlations with harvest index and grain yield. Harvest index had positive and highly significant genotypic and phenotypic correlation with grain yield. Genotypic and phenotypic correlation coefficients revealed that important characters influencing grain yield are harvest index and biological yield. Path analysis showed the importance in order of harvest index, biological yield, plant height, days to maturity and days to heading with grain yield. (author)
Matrix correlations for high-dimensional data: The modified RV-coefficient
Smilde, A.K.; Kiers, H.A.L.; Bijlsma, S.; Rubingh, C.M.; Erk, M.J. van
2009-01-01
Motivation: Modern functional genomics generates high-dimensional datasets. It is often convenient to have a single simple number characterizing the relationship between pairs of such high-dimensional datasets in a comprehensive way. Matrix correlations are such numbers and are appealing since they
Barchard, Kimberly A.
2012-01-01
This article introduces new statistics for evaluating score consistency. Psychologists usually use correlations to measure the degree of linear relationship between 2 sets of scores, ignoring differences in means and standard deviations. In medicine, biology, chemistry, and physics, a more stringent criterion is often used: the extent to which…
Directory of Open Access Journals (Sweden)
Zhixian Huang
Full Text Available Abstract To investigate the mass transfer behavior of a liquid-liquid system with high density difference (∆ρ≈500 kg/m3, single drop experiments were performed by using the ternary chloroform-ethanol-water system. The mass transfer direction was from the dispersed phase to the continuous phase, while the aqueous phase was dispersed in chloroform to generate drops. The influences of drop diameter, initial solute concentration and temperature on the mass transfer were investigated. The effects of the drop diameter and initial solute concentration on interfacial instability of droplets hanging in the continuous phase were also observed. For the purpose of correlation, a mass transfer enhancement factor F was introduced and then correlated as a function of dimensionless variables. The modified correlation from the mass transfer coefficient model was found to fit well with the experimental values.
Generalized Correlation Coefficient for Non-Parametric Analysis of Microarray Time-Course Data
DEFF Research Database (Denmark)
Tan, Qihua; Thomassen, Mads; Burton, Mark
2017-01-01
the heterogeneous time-course gene expression patterns. Application of the method identified nonlinear time-course patterns in high agreement with parametric analysis. We conclude that the non-parametric nature in the generalized correlation analysis could be an useful and efficient tool for analyzing microarray...... time-course data and for exploring the complex relationships in the omics data for studying their association with disease and health....
Receiver function estimated by maximum entropy deconvolution
Institute of Scientific and Technical Information of China (English)
吴庆举; 田小波; 张乃铃; 李卫平; 曾融生
2003-01-01
Maximum entropy deconvolution is presented to estimate receiver function, with the maximum entropy as the rule to determine auto-correlation and cross-correlation functions. The Toeplitz equation and Levinson algorithm are used to calculate the iterative formula of error-predicting filter, and receiver function is then estimated. During extrapolation, reflective coefficient is always less than 1, which keeps maximum entropy deconvolution stable. The maximum entropy of the data outside window increases the resolution of receiver function. Both synthetic and real seismograms show that maximum entropy deconvolution is an effective method to measure receiver function in time-domain.
Energy Technology Data Exchange (ETDEWEB)
Lu, Fengbin, E-mail: fblu@amss.ac.cn [Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100190 (China); Qiao, Han, E-mail: qiaohan@ucas.ac.cn [School of Economics and Management, University of Chinese Academy of Sciences, Beijing 100190 (China); Wang, Shouyang, E-mail: sywang@amss.ac.cn [School of Economics and Management, University of Chinese Academy of Sciences, Beijing 100190 (China); Lai, Kin Keung, E-mail: mskklai@cityu.edu.hk [Department of Management Sciences, City University of Hong Kong (Hong Kong); Li, Yuze, E-mail: richardyz.li@mail.utoronto.ca [Department of Industrial Engineering, University of Toronto (Canada)
2017-01-15
This paper proposes a new time-varying coefficient vector autoregressions (VAR) model, in which the coefficient is a linear function of dynamic lagged correlation. The proposed model allows for flexibility in choices of dynamic correlation models (e.g. dynamic conditional correlation generalized autoregressive conditional heteroskedasticity (GARCH) models, Markov-switching GARCH models and multivariate stochastic volatility models), which indicates that it can describe many types of time-varying causal effects. Time-varying causal relations between West Texas Intermediate (WTI) crude oil and the US Standard and Poor’s 500 (S&P 500) stock markets are examined by the proposed model. The empirical results show that their causal relations evolve with time and display complex characters. Both positive and negative causal effects of the WTI on the S&P 500 in the subperiods have been found and confirmed by the traditional VAR models. Similar results have been obtained in the causal effects of S&P 500 on WTI. In addition, the proposed model outperforms the traditional VAR model.
International Nuclear Information System (INIS)
Lu, Fengbin; Qiao, Han; Wang, Shouyang; Lai, Kin Keung; Li, Yuze
2017-01-01
This paper proposes a new time-varying coefficient vector autoregressions (VAR) model, in which the coefficient is a linear function of dynamic lagged correlation. The proposed model allows for flexibility in choices of dynamic correlation models (e.g. dynamic conditional correlation generalized autoregressive conditional heteroskedasticity (GARCH) models, Markov-switching GARCH models and multivariate stochastic volatility models), which indicates that it can describe many types of time-varying causal effects. Time-varying causal relations between West Texas Intermediate (WTI) crude oil and the US Standard and Poor’s 500 (S&P 500) stock markets are examined by the proposed model. The empirical results show that their causal relations evolve with time and display complex characters. Both positive and negative causal effects of the WTI on the S&P 500 in the subperiods have been found and confirmed by the traditional VAR models. Similar results have been obtained in the causal effects of S&P 500 on WTI. In addition, the proposed model outperforms the traditional VAR model.
Lu, Fengbin; Qiao, Han; Wang, Shouyang; Lai, Kin Keung; Li, Yuze
2017-01-01
This paper proposes a new time-varying coefficient vector autoregressions (VAR) model, in which the coefficient is a linear function of dynamic lagged correlation. The proposed model allows for flexibility in choices of dynamic correlation models (e.g. dynamic conditional correlation generalized autoregressive conditional heteroskedasticity (GARCH) models, Markov-switching GARCH models and multivariate stochastic volatility models), which indicates that it can describe many types of time-varying causal effects. Time-varying causal relations between West Texas Intermediate (WTI) crude oil and the US Standard and Poor's 500 (S&P 500) stock markets are examined by the proposed model. The empirical results show that their causal relations evolve with time and display complex characters. Both positive and negative causal effects of the WTI on the S&P 500 in the subperiods have been found and confirmed by the traditional VAR models. Similar results have been obtained in the causal effects of S&P 500 on WTI. In addition, the proposed model outperforms the traditional VAR model. Copyright Â© 2016 Elsevier Ltd. All rights reserved.
Evaluation of random errors in Williams’ series coefficients obtained with digital image correlation
International Nuclear Information System (INIS)
Lychak, Oleh V; Holyns’kiy, Ivan S
2016-01-01
The use of the Williams’ series parameters for fracture analysis requires valid information about their error values. The aim of this investigation is the development of the method for estimation of the standard deviation of random errors of the Williams’ series parameters, obtained from the measured components of the stress field. Also, the criteria for choosing the optimal number of terms in the truncated Williams’ series for derivation of their parameters with minimal errors is proposed. The method was used for the evaluation of the Williams’ parameters, obtained from the data, and measured by the digital image correlation technique for testing a three-point bending specimen. (paper)
International Nuclear Information System (INIS)
Fan, Jiang; Wei, Ding
2010-01-01
A previously published new rotation function has been improved by using a dynamic correlation coefficient as well as two new scoring functions of relative entropy and mean-square-residues to make the rotation function more robust and independent of a specific set of weights for scoring and ranking. The previously described new rotation function calculates the rotation function of molecular replacement by matching the search model directly with the Patterson vector map. The signal-to-noise ratio for the correct match was increased by averaging all the matching peaks. Several matching scores were employed to evaluate the goodness of matching. These matching scores were then combined into a single total score by optimizing a set of weights using the linear regression method. It was found that there exists an optimal set of weights that can be applied to the global rotation search and the correct solution can be ranked in the top 100 or less. However, this set of optimal weights in general is dependent on the search models and the crystal structures with different space groups and cell parameters. In this work, we try to solve this problem by designing a dynamic correlation coefficient. It is shown that the dynamic correlation coefficient works for a variety of space groups and cell parameters in the global search of rotation function. We also introduce two new matching scores: relative entropy and mean-square-residues. Last but not least, we discussed a valid method for the optimization of the adjustable parameters for matching vectors. (condensed matter: structure, thermal and mechanical properties)
Lin, Yuning; Li, Hui; Chen, Ziqian; Ni, Ping; Zhong, Qun; Huang, Huijuan; Sandrasegaran, Kumar
2015-05-01
The purpose of this study was to investigate the application of histogram analysis of apparent diffusion coefficient (ADC) in characterizing pathologic features of cervical cancer and benign cervical lesions. This prospective study was approved by the institutional review board, and written informed consent was obtained. Seventy-three patients with cervical cancer (33-69 years old; 35 patients with International Federation of Gynecology and Obstetrics stage IB cervical cancer) and 38 patients (38-61 years old) with normal cervix or cervical benign lesions (control group) were enrolled. All patients underwent 3-T diffusion-weighted imaging (DWI) with b values of 0 and 800 s/mm(2). ADC values of the entire tumor in the patient group and the whole cervix volume in the control group were assessed. Mean ADC, median ADC, 25th and 75th percentiles of ADC, skewness, and kurtosis were calculated. Histogram parameters were compared between different pathologic features, as well as between stage IB cervical cancer and control groups. Mean ADC, median ADC, and 25th percentile of ADC were significantly higher for adenocarcinoma (p = 0.021, 0.006, and 0.004, respectively), and skewness was significantly higher for squamous cell carcinoma (p = 0.011). Median ADC was statistically significantly higher for well or moderately differentiated tumors (p = 0.044), and skewness was statistically significantly higher for poorly differentiated tumors (p = 0.004). No statistically significant difference of ADC histogram was observed between lymphovascular space invasion subgroups. All histogram parameters differed significantly between stage IB cervical cancer and control groups (p histogram analysis may help to distinguish early-stage cervical cancer from normal cervix or cervical benign lesions and may be useful for evaluating the different pathologic features of cervical cancer.
Directory of Open Access Journals (Sweden)
Marcin Kozak
2012-12-01
Full Text Available This paper discusses a number of aspects concerning the analysis, interpretation and reporting of correlations in agricultural sciences. Various problems that one might encounter with these aspects are identified, and suggestions of how to overcome these problems are proposed. Some of the examples presented show how mistaken and even misleading the interpretation of correlation can be when one ignores simple rules of analysis.Este artigo discute uma série de aspectos relacionados a análise, interpretação e forma de relatar correlações em ciências Agrárias. São identificados vários problemas que podem ser encontrados, bem como feitas sugestões de como superá-los. Alguns dos exemplos apresentados mostram quão erradas e mesmo enganosas podem ser as interpretações de correlação quando regras simples de análise são ignoradas.
Zimmer, O; Grinten, M G D; Heil, W; Glück, F
2000-01-01
The combination of the coefficient a of the antineutrino/electron angular correlation with the beta asymmetry of the neutron provides a sensitive test for scalar and tensor contributions to the electroweak Lagrangian, as well as for right-handed currents. A method is given for measuring a with high sensitivity from the proton recoil spectrum. The method is based on a magnetic spectrometer with electrostatic retardation potentials such as used for searches of the neutrino mass in tritium beta decay. The spectrometer can also be used for similar studies using radioactive nuclei.
Buttler, William T.; Soriano, Cecilia; Baldasano, Jose M.; Nickel, George H.
Maximum cross-correlation provides a method toremotely de-ter-mine high-lyre-solved three-dimensional fields of horizontalwinds with e-las-tic li-darthrough-out large volumes of the planetaryboundary layer (PBL). This paperdetails the technique and shows comparisonsbetween elastic lidar winds, remotelysensed laser Doppler velocimeter (LDV) windprofiles, and radiosonde winds.Radiosonde wind data were acquired at Barcelona,Spain, during the BarcelonaAir-Quality Initiative (1992), and the LDVwind data were acquired at SunlandPark, New Mexico during the 1994 Border AreaAir-Quality Study. Comparisonsshow good agreement between the differentinstruments, and demonstrate the methoduseful for air pollution management at thelocal/regional scale. Elastic lidar windscould thus offer insight into aerosol andpollution transport within the PBL. Lidarwind fields might also be used to nudge orimprove initialization and evaluation ofatmospheric meteorological models.
Kim, Soo-Yeon; Shin, Jaewook; Kim, Dong-Hyun; Kim, Eun-Kyung; Moon, Hee Jung; Yoon, Jung Hyun; You, Jai Kyung; Kim, Min Jung
2018-03-06
To investigate the correlation between conductivity and ADC in invasive ductal carcinoma according to the presence of necrosis on MRI. Eighty-one women with invasive ductal carcinoma ≥1 cm on T2-weighted fast spin echo sequence of preoperative MRI were included. Phase-based MR electric properties tomography was used to reconstruct conductivity. Mean ADC was measured. Necrosis was defined as an area with very high T2 signal intensity. The relationship between conductivity and ADC was examined using Spearman's correlation coefficient (r). Multiple linear regression analysis was performed to identify factors associated with conductivity or ADC. In the total group, conductivity showed negative correlation with ADC (r = -0.357, p = 0.001). This correlation was maintained in the subgroup without necrosis (n = 53, r = -0.455, p = 0.001), but not in the subgroup with necrosis (n = 28, r = -0.080, p = 0.687). The correlation between the two parameters was different according to necrosis (r = -0.455 vs -0.080, p = 0.047). HER2 enriched subtype was independently associated with conductivity (p = 0.029). Necrosis on MRI was independently associated with ADC (p = 0.027). Conductivity shows negative correlation with ADC that is abolished by the presence of necrosis on MRI. • Electric conductivity showed negative correlation with ADC • However, the correlation was abolished by the presence of necrosis on MRI • HER2-enriched subtype was independently associated with conductivity • Necrosis on MRI was independently associated with ADC.
Shen, Guohua; Ma, Huan; Liu, Bin; Ren, Pengwei; Kuang, Anren
2017-12-01
Diffusion-weighted imaging and fluorine-18-fluorodeoxyglucose PET are increasingly being recognized as feasible oncological techniques. The apparent diffusion coefficient (ADC) measured by diffusion-weighted imaging and the standardized uptake value (SUV) from fluorine-18-fluorodeoxyglucose PET have similar clinical applications. The aim of this study was to assess the correlation between these two parameters in various cancers. Several major databases were searched for eligible studies. The correlation coefficient (ρ) values were pooled in a random-effects model. Begg's test was used to analyze the existence of publication bias and the sources of heterogeneity were explored in subgroup analyses on the basis of study design, diagnostic method, scanning modality, and tumor type. Thirty-five articles were accepted. The pooled ρ value of all of the accepted studies was -0.30 (95% confidence interval: -0.33 to -0.27), and notable heterogeneity was present (I=69.4%, Pcorrelation. The pooled ρ values were -0.26, -0.33, -0.32, and -0.33 for the SUVmax/ADCmean, SUVmax/ADCmin, SUVmean/ADCmean, and SUVmean/ADCmin relationships, respectively. The study design and diagnostic method were potential sources of heterogeneity. Lung cancer showed a stronger correlation (ρ=-0.42) than head and neck cancer (ρ=-0.27), cervical cancer (ρ=-0.21), and breast cancer (ρ=-0.23). A Begg's test indicated no significant publication bias among the accepted studies (P>0.05). The two functional parameters of ADC and SUV showed a very weak inverse correlation, which may contribute toward a sophisticated characterization of tumor biology. However, the findings require further validation with trials with large samples and different tumor types.
Paech, Daniel; Burth, Sina; Windschuh, Johannes; Meissner, Jan-Eric; Zaiss, Moritz; Eidel, Oliver; Kickingereder, Philipp; Nowosielski, Martha; Wiestler, Benedikt; Sahm, Felix; Floca, Ralf Omar; Neumann, Jan-Oliver; Wick, Wolfgang; Heiland, Sabine; Bendszus, Martin; Schlemmer, Heinz-Peter; Ladd, Mark Edward; Bachert, Peter; Radbruch, Alexander
2015-01-01
To explore the correlation between Nuclear Overhauser Enhancement (NOE)-mediated signals and tumor cellularity in glioblastoma utilizing the apparent diffusion coefficient (ADC) and cell density from histologic specimens. NOE is one type of chemical exchange saturation transfer (CEST) that originates from mobile macromolecules such as proteins and might be associated with tumor cellularity via altered protein synthesis in proliferating cells. For 15 patients with newly diagnosed glioblastoma, NOE-mediated CEST-contrast was acquired at 7 Tesla (asymmetric magnetization transfer ratio (MTRasym) at 3.3ppm, B1 = 0.7 μT). Contrast enhanced T1 (CE-T1), T2 and diffusion-weighted MRI (DWI) were acquired at 3 Tesla and coregistered. The T2 edema and the CE-T1 tumor were segmented. ADC and MTRasym values within both regions of interest were correlated voxelwise yielding the correlation coefficient rSpearman (rSp). In three patients who underwent stereotactic biopsy, cell density of 12 specimens per patient was correlated with corresponding MTRasym and ADC values of the biopsy site. Eight of 15 patients showed a weak or moderate positive correlation of MTRasym and ADC within the T2 edema (0.16≤rSp≤0.53, pcorrelations were statistically insignificant (p>0.05, n = 4) or yielded rSp≈0 (pcorrelation between MTRasym and ADC was found in CE-T1 tumor (-0.310.05, n = 6). The biopsy-analysis within CE-T1 tumor revealed a strong positive correlation between tumor cellularity and MTRasym values in two of the three patients (rSppatient3 = 0.69 and rSppatient15 = 0.87, pcorrelation of ADC and cellularity was heterogeneous (rSppatient3 = 0.545 (p = 0.067), rSppatient4 = -0.021 (p = 0.948), rSppatient15 = -0.755 (p = 0.005)). NOE-imaging is a new contrast promising insight into pathophysiologic processes in glioblastoma regarding cell density and protein content, setting itself apart from DWI. Future studies might be based on the assumption that NOE-mediated CEST visualizes
Energy Technology Data Exchange (ETDEWEB)
Jeong, Ju Hye [Dept. of Nuclear Medicine, Kyungpook National University Hospital, Daegu (Korea, Republic of); Cho, Ihn Ho; Chun, Kyung Ah; Kong, Eun Jung; Kwon, Sang Don; Kim, Jae Hwang [Yeungnam University Hospital, Daegu (Korea, Republic of)
2016-06-15
Fluorine-18-fluorodeoxyglucose ({sup 18}F-FDG) positron emission tomography (PET) and diffusion-weighted magnetic resonance imaging (DWI) share the same role in clinical oncology and it is feasible to obtain the standardized uptake value (SUV) and apparent diffusion coefficient (ADC) simultaneously by emerging the hybrid positron emission tomography/magnetic resonance (PET/MR). This study investigated the correlation between the ADCs of rectal cancer lesions and their SUVs derived from hybrid PET/MR. Nine patients with histologically proven rectal adenocarcinoma (5 men, 4 women; mean age, 70 ± 15.91 years) underwent torso {sup 18}F-FDG PET/CT and regional hybrid {sup 18}F-FDG PET/MR sequentially. A fixed threshold value of 40 % of maximum uptake was used to determine tumor volume of interest (VOI) on PET image; SUV{sub max}, SUV{sub peak}, and SUV{sub mean} were calculated automatically. A single freehand region of interest (ROI) was drawn on high b-value (b1000) DWI image and copied to corresponding ADC map to determine the ADCmean of rectal cancer lesion. Spearman'rank correlation coefficient (ρ) was calculated to determine the correlation between SUVs and ADC values. SUV{sub max}, SUV{sub peak}, and SUV{sub mean} derived by hybrid PET/MR were 12.35 ± 4.66 (mean ± standard deviation), 9.66 ± 3.15 and 7.41 ± 2.54, respectively. The ADCmean value of rectal cancer lesions was 1.02 ± 0.08 × 10{sup -3}mm{sup 2}/s. ADCmean was significantly and inversely correlated with SUV values (SUV{sub max}, ρ = -0.95, p < 0.001; SUV{sub peak}, ρ = -0.93, p < 0.001; SUV{sub mean}, ρ = -0.91, p = 0.001). This preliminary hybrid PET/MR study demonstrates a significant inverse correlation exists between metabolic activity on {sup 18}F-FDG PET and water diffusion on DWI in rectal cancer.
Nadeem, Qurrat-Ul-Ain
2015-05-07
Previous studies have confirmed the adverse impact of fading correlation on the mutual information (MI) of two-dimensional (2D) multiple-input multiple-output (MIMO) systems. More recently, the trend is to enhance the system performance by exploiting the channel’s degrees of freedom in the elevation, which necessitates the derivation and characterization of three-dimensional (3D) channels in the presence of spatial correlation. In this paper, an exact closed-form expression for the Spatial Correlation Function (SCF) is derived for 3D MIMO channels. This novel SCF is developed for a uniform linear array of antennas with nonisotropic antenna patterns. The proposed method resorts to the spherical harmonic expansion (SHE) of plane waves and the trigonometric expansion of Legendre and associated Legendre polynomials. The resulting expression depends on the underlying arbitrary angular distributions and antenna patterns through the Fourier Series (FS) coefficients of power azimuth and elevation spectrums. The novelty of the proposed method lies in the SCF being valid for any 3D propagation environment. The developed SCF determines the covariance matrices at the transmitter and the receiver that form the Kronecker channel model. In order to quantify the effects of correlation on the system performance, the information-theoretic deterministic equivalents of the MI for the Kronecker model are utilized in both mono-user and multi-user cases. Numerical results validate the proposed analytical expressions and elucidate the dependence of the system performance on azimuth and elevation angular spreads and antenna patterns. Some useful insights into the behaviour of MI as a function of downtilt angles are provided. The derived model will help evaluate the performance of correlated 3D MIMO channels in the future.
International Nuclear Information System (INIS)
Liu, Song; Guan, Wenxian; Wang, Hao; Pan, Liang; Zhou, Zhuping; Yu, Haiping; Liu, Tian; Yang, Xiaofeng; He, Jian; Zhou, Zhengyang
2014-01-01
Highlights: • Gastric cancers’ ADC values were significantly lower than normal gastric wall. • Gastric adenocarcinomas with different differentiation had different ADC values. • Gastric adenocarcinomas’ ADC values correlated with histologic differentiations. • Gastric cancers’ ADC values correlated with Lauren classifications. • Mean ADC value was better than min ADC value in characterizing gastric cancers. - Abstract: Objective: The purpose of this study was to evaluate the correlations between histological differentiation and Lauren classification of gastric cancer and the apparent diffusion coefficient (ADC) value of diffusion weighted imaging (DWI). Materials and methods: Sixty-nine patients with gastric cancer lesions underwent preoperative magnetic resonance imaging (MRI) (3.0T) and surgical resection. DWI was obtained with a single-shot, echo-planar imaging sequence in the axial plane (b values: 0 and 1000 s/mm 2 ). Mean and minimum ADC values were obtained for each gastric cancer and normal gastric walls by two radiologists, who were blinded to the histological findings. Histological type, degree of differentiation and Lauren classification of each resected specimen were determined by one pathologist. Mean and minimum ADC values of gastric cancers with different histological types, degrees of differentiation and Lauren classifications were compared. Correlations between ADC values and histological differentiation and Lauren classification were analyzed. Results: The mean and minimum ADC values of gastric cancers, as a whole and separately, were significantly lower than those of normal gastric walls (all p values <0.001). There were significant differences in the mean and minimum ADC values among gastric cancers with different histological types, degrees of differentiation and Lauren classifications (p < 0.05). Mean and minimum ADC values correlated significantly (all p < 0.001) with histological differentiation (r = 0.564, 0.578) and Lauren
Zheng, Ping; He, Bin; Guo, Yijun; Zeng, Jingsong; Tong, Wusong
2015-07-01
The relationship between microstructural abnormality in patients with traumatic brain injury (TBI) and hormone-secreting status remains unknown. In this study, the authors aimed to identify the role of the apparent diffusion coefficient (ADC) using a diffusion-weighted imaging (DWI) technique and to evaluate the association of such changes with hypopituitarism in patients with TBI. Diffusion-weighted images were obtained in 164 consecutive patients with TBI within 2 weeks after injury to generate the pituitary ADC as a measure of microstructural change. Patients with TBI were further grouped into those with and those without hypopituitarism based on the secretion status of pituitary hormones at 6 months postinjury. Thirty healthy individuals were enrolled in the study and underwent MRI examinations for comparison. Mean ADC values were compared between this control group, the patients with TBI and hypopituitarism, and the patients with TBI without hypopituitarism; correlational studies were also performed. Neurological outcome was assessed with the Glasgow Outcome Scale (GOS) for all TBI patients 6 months postinjury. In the TBI group, 84 patients had hypopituitarism and 80 had normal pituitary function. The pituitary ADC in TBI patients was significantly less than that in controls (1.83 ± 0.16 vs 4.13 ± 0.33, p correlated with neurological outcome at 6 months following TBI (r = 0.602, p correlated with hormone-secreting status in TBI patients. The authors suggest that pituitary ADC may be a useful biomarker to predict pituitary function in patients with TBI.
Wu, X; Reinikainen, P; Vanhanen, A; Kapanen, M; Vierikko, T; Ryymin, P; Hyödynmaa, S; Kellokumpu-Lehtinen, P-L
2017-01-01
To investigate whether diffusion-weighted imaging (DWI) apparent diffusion coefficient (ADC) correlates with prostate cancer aggressiveness and further to compare the diagnostic performance of ADC and normalized ADC (nADC: normalized to non-tumor tissue). Thirty pre-treatment patients (mean age, 69years; range: 59-78years) with prostate cancer underwent magnetic resonance imaging (MRI) examination, including DWI with three b values: 50, 400, and 800s/mm 2 . Both ADC and nADC were correlated with the Gleason score obtained through transrectal ultrasound-guided biopsy. The tumor minimum ADC (ADC min : the lowest ADC value within tumor) had an inverse correlation with the Gleason score (r=-0.43, Pcorrelated with the Gleason score (r=-0.52 and r=-0.55, P<0.01; respectively), and they were lower in patients with Gleason score 3+4 than those with Gleason score 3+3 (P<0.01; respectively). Receiver operating characteristic (ROC) analysis showed that the area under the ROC curve was 0.765, 0.818, or 0.833 for the ADC min , nADC min , or nADC mean ; respectively, in differentiating between Gleason score 3+4 and 3+3 tumors. Tumor ADC min , nADC min , and nADC mean are useful markers to predict the aggressiveness of prostate cancer. Copyright © 2016 Éditions françaises de radiologie. Published by Elsevier Masson SAS. All rights reserved.
Heuzé, Céline; Eriksson, Leif; Carvajal, Gisela
2017-04-01
Using sea surface temperature from satellite images to retrieve sea surface currents is not a new idea, but so far its operational near-real time implementation has not been possible. Validation studies are too region-specific or uncertain, due to the errors induced by the images themselves. Moreover, the sensitivity of the most common retrieval method, the maximum cross correlation, to the three parameters that have to be set is unknown. Using model outputs instead of satellite images, biases induced by this method are assessed here, for four different seas of Western Europe, and the best of nine settings and eight temporal resolutions are determined. For all regions, tracking a small 5 km pattern from the first image over a large 30 km region around its original location on a second image, separated from the first image by 6 to 9 hours returned the most accurate results. Moreover, for all regions, the problem is not inaccurate results but missing results, where the velocity is too low to be picked by the retrieval. The results are consistent both with limitations caused by ocean surface current dynamics and with the available satellite technology, indicating that automated sea surface current retrieval from sea surface temperature images is feasible now, for search and rescue operations, pollution confinement or even for more energy efficient and comfortable ship navigation.
National Research Council Canada - National Science Library
Xiaojuan, Ou; Wei, Zhou; Jianguo, Yu
2005-01-01
In this paper, we pay our attention to the multiscale kalman algorithm based on correlation structure of the discrete wavelet coefficients for the restoration of the GPS common-view observation data...
International Nuclear Information System (INIS)
Simson, Martin
2010-01-01
This thesis describes measurements with the retardation spectrometer aSPECT at the Institut Laue-Langevin in Grenoble. The goal of the measurement is to determine the angular correlation coefficient a from the form of the proton recoil spectrum in the decay of the free neutron in order to determine a precise value for the ratio of the weak axial vector and vector coupling constants of the nucleon. A big improvement was achieved with the use of a silicon drift detector which was used here for the first time to detect low energetic protons. A saturation effect of the electronics that was only discovered during the analysis of the data from neutron decay proved to be not correctable. The findings from analysis, simulations and test experiments gained in this work should allow a measurement of a with high precision in a future beamtime. (orig.)
Energy Technology Data Exchange (ETDEWEB)
Simson, Martin
2010-09-21
This thesis describes measurements with the retardation spectrometer aSPECT at the Institut Laue-Langevin in Grenoble. The goal of the measurement is to determine the angular correlation coefficient a from the form of the proton recoil spectrum in the decay of the free neutron in order to determine a precise value for the ratio of the weak axial vector and vector coupling constants of the nucleon. A big improvement was achieved with the use of a silicon drift detector which was used here for the first time to detect low energetic protons. A saturation effect of the electronics that was only discovered during the analysis of the data from neutron decay proved to be not correctable. The findings from analysis, simulations and test experiments gained in this work should allow a measurement of a with high precision in a future beamtime. (orig.)
DEFF Research Database (Denmark)
Ibnal Asad, Khalid; Ahmed, Tanvir; Rahman, Md. Saiedur
2012-01-01
Abundance of movie data across the internet makes it an obvious candidate for machine learning and knowledge discovery. But most researches are directed towards bi-polar classification of movie or generation of a movie recommendation system based on reviews given by viewers on various internet...... sites. Classification of movie popularity based solely on attributes of a movie i.e. actor, actress, director rating, language, country and budget etc. has been less highlighted due to large number of attributes that are associated with each movie and their differences in dimensions. In this paper, we...... propose classification scheme of pre-release movie popularity based on inherent attributes using C4.S and PART classifier algorithm and define the relation between attributes of post release movies using correlation coefficient....
Directory of Open Access Journals (Sweden)
Lijun Yao
2018-03-01
Full Text Available The moving-window bis-correlation coefficients (MW-BiCC was proposed and employed for the discriminant analysis of transgenic sugarcane leaves and β-thalassemia with visible and near-infrared (Vis–NIR spectroscopy. The well-performed moving-window principal component analysis linear discriminant analysis (MW-PCA–LDA was also conducted for comparison. A total of 306 transgenic (positive and 150 nontransgenic (negative leave samples of sugarcane were collected and divided to calibration, prediction, and validation. The diffuse reflection spectra were corrected using Savitzky–Golay (SG smoothing with first-order derivative (d=1, third-degree polynomial (p=3 and 25 smoothing points (m=25. The selected waveband was 736–1054nm with MW-BiCC, and the positive and negative validation recognition rates (V_REC+, V_REC− were 100%, 98.0%, which achieved the same effect as MW-PCA–LDA. Another example, the 93 β-thalassemia (positive and 148 nonthalassemia (negative of human hemolytic samples were collected. The transmission spectra were corrected using SG smoothing with d=1, p=3 and m=53. Using MW-BiCC, many best wavebands were selected (e.g., 1116–1146, 1794–1848 and 2284–2342nm. The V_REC+ and V_REC− were both 100%, which achieved the same effect as MW-PCA–LDA. Importantly, the BiCC only required calculating correlation coefficients between the spectrum of prediction sample and the average spectra of two types of calibration samples. Thus, BiCC was very simple in algorithm, and expected to obtain more applications. The results first confirmed the feasibility of distinguishing β-thalassemia and normal control samples by NIR spectroscopy, and provided a promising simple tool for large population thalassemia screening.
International Nuclear Information System (INIS)
Bond, J.A.; Baker, S.M.; Bechtold, W.E.
1985-01-01
Studies on the lung retention of polycyclic aromatic hydrocarbons (PAH) after inhalation have indicated that, in general, the PAH are rapidly cleared from the respiratory tract. Clearance of the PAH from the lungs is best described as bi-phasic, with the long-term component of the clearance curve having a half-time of greater than 24 h. The purpose of this study was to determine whether a relationship exists between the lipophilicity (as measured by the octanol/water partition coefficient, P) of various PAH and the short-term and long-term clearance half-times of PAH in rat lungs. Female F344/Crl rats were administered intratracheally 1 nmol of 14 C-labelled anthracene (AN), benz (a) anthracene (BA), 1-nitropyrene (NP), 6-nitrobenzo (a) pyrene (6-NBP), or dibenzo (c, g) carbazole (DBC). At various times after instillation rats were sacrificed and the amount of 14 C from rat lungs following instillation of the different PAH was biphasic. In all cases, greater than 85% of the initial dose instilled was cleared with a half-time of less than 1 h. The half-times for clearance of the residual 14 C (1-15% of the dose) were 26, 30, 36, 53 and 63 h for AN, NP, 6-NBP, BA and DCB, respectively. The log of the octanol-water partition coefficients for the different PAH examined ranged from 4.1 (AN) to 6.05 (DBC). Plots of the octanol/water coefficients vs. the long-term clearance half-time for the PAH indicated a linear correlation (p 2 =0.96). The results from this study indicate that the greater the lipophilicity of the PAH, the slower the long-term clearance of a small fraction (1-15%) of PAH from rat lungs. These data suggest that predictions of long-term lung clearance can be made for PAH with log octanol-water partition coefficients between 4 and 6. (author)
Correlation of apparent diffusion coefficient ratio on 3.0 T MRI with prostate cancer Gleason score.
Jyoti, Rajeev; Jain, Tarun Pankaj; Haxhimolla, Hodo; Liddell, Heath; Barrett, Sean Edward
2018-01-01
The purpose was to investigate the usefulness of ADC ratio on Diffusion MRI to discriminate between benign and malignant lesions of Prostate. Images of patients who underwent in-gantry MRI guided prostate lesion biopsy were retrospectively analyzed. Prostate Cancers with 20% or more Gleason score (GS) pattern 3 + 3 = 6 in each core or any volume of higher Gleason score pattern were included. ADC ratio was calculated by two reviewers for each lesion. The ADC ratio was calculated for each lesion by dividing the lowest ADC value in a lesion and highest ADC value in normal prostate in peripheral zone (PZ). ADC ratio values were compared with the biopsy result. Data was analysed using independent samples T-test, Spearman correlation, intra-class correlation coefficient (ICC) and Receiver operating characteristic (ROC) curve. 45 lesions in 33 patients were analyzed. 12 lesions were in transitional zone (TZ) and 33 in perpheral zone PZ. All lesions demonstrated an ADC ratio of 0.45 or lower. GS demonstrated a negative correlation with both the ADC value and ADC ratio . However, ADC ratio (p correlation compared to ADC value alone (p = 0.014). There was no significant statistical difference between GS 3 + 4 and GS 4 + 3 mean ADC tumour value (p = 0.167). However when using ADC ratio , there was a significant difference (p = 0.032). ROC curve analysis demonstrated an area under the curve of 0.83 using ADC ratio and 0.76 when using ADC tumour value when discriminating Gleason 6 from Gleason ≥7 tumours. Inter-observer reliability in the calculation of ADC ratios was excellent, with ICC of 0.964. ADC ratio is a reliable and reproducible tool in quantification of diffusion restriction for clinically significant prostate cancer foci.
Driessen, Juliette P; van Bemmel, Alexander J M; van Kempen, Pauline M W; Janssen, Luuk M; Terhaard, Chris H J; Pameijer, Frank A; Willems, Stefan M; Stegeman, Inge; Grolman, Wilko; Philippens, Marielle E P
2016-04-01
Identification of prognostic patient characteristics in head and neck squamous cell carcinoma (HNSCC) is of great importance. Human papillomavirus (HPV)-positive HNSCCs have favorable response to (chemo)radiotherapy. Apparent diffusion coefficient, derived from diffusion-weighted MRI, has also shown to predict treatment response. The purpose of this study was to evaluate the correlation between HPV status and apparent diffusion coefficient. Seventy-three patients with histologically proven HNSCC were retrospectively analyzed. Mean pretreatment apparent diffusion coefficient was calculated by delineation of total tumor volume on diffusion-weighted MRI. HPV status was analyzed and correlated to apparent diffusion coefficient. Six HNSCCs were HPV-positive. HPV-positive HNSCC showed significantly lower apparent diffusion coefficient compared to HPV-negative. This correlation was independent of other patient characteristics. In HNSCC, positive HPV status correlates with low mean apparent diffusion coefficient. The favorable prognostic value of low pretreatment apparent diffusion coefficient might be partially attributed to patients with a positive HPV status. © 2015 Wiley Periodicals, Inc. Head Neck 38: E613-E618, 2016. © 2015 Wiley Periodicals, Inc.
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A. R Tavakoli
2012-07-01
Full Text Available In order to investigate the indices of drought tolerance, correlation coefficient and path analysis at deficit irrigation and nitrogen experiment, this experiment was conducted as split plot arranged in a randomized complete block design (RCBD with three replications during 2000-2003 for wheat at Maragheh agricultural research station of DARI. The treatments were included four levels of deficit irrigation (Rainfed, 100, 160 and 220mm of water use as main plots and five nitrogen rates (0, 30, 60, 90 and 120 kg.N.ha-1 as sub plots. Grain, straw and biological yield, harvest index, productivity degree, plant height, kernel number per spike, Spike number per square meter and TKW determined from the middle of each plot. There were positive significant correlations due to grain yield with all variables: harvest index (r = 0.969 , Productivity degree (r = 0.952 , straw yield (r = 0.904 , plant height (r = 0.904 , biological yield (r = 0.824 , Spike number per square meter (r = 0.817 , kernel number per spike (r = 0.773 and TKW (r = 0.612 respectively. Results of path analysis showed that increase in grain yield was due to increase spike number per square meter and kernel number per spike respectively. On based of indices of drought tolerance (Tolerance Index, Mean Productivity, Geometric Mean Productivity and Harmonic Mean, treatment of %66full irrigation combined with 90KgN.ha-1 was substantially increased water productivity.
Energy Technology Data Exchange (ETDEWEB)
Geldard, J.F.; Beyerlein, A.L.; Phillips, L.
1985-09-01
Distribution coefficient correlations for U(IV) and Pu(III) are obtained in terms of a modified form of the total nitrate ion salting strength that was successfully used to obtain distribution coefficient correlations for U(VI) and Pu(IV) in the earlier work of G.L. Richardson. The modification of salting strength was needed to account for the fact that the U(IV) distribution coefficients measured under conditions where U(VI) is present consistently fall below those obtained when it is absent. The correlations were incorporated into the mixer-settler computer model PUBG, and in the simulation of a 20-stage 1B partitioning contactor, calculated product stream concentrations were in excellent agreement with experiment. Earlier mixer-settler computer models, which failed to account for U(IV) distribution coefficients, predicted that U(IV) remained in the aqueous product stream, which is contrary to the experimental measurements.
International Nuclear Information System (INIS)
Geldard, J.F.; Beyerlein, A.L.; Phillips, L.
1985-01-01
Distribution coefficient correlations for U(IV) and Pu(III) are obtained in terms of a modified form of the total nitrate ion salting strength that was successfully used to obtain distribution coefficient correlations for U(VI) and Pu(IV) in the earlier work of G.L. Richardson. The modification of salting strength was needed to account for the fact that the U(IV) distribution coefficients measured under conditions where U(VI) is present consistently fall below those obtained when it is absent. The correlations were incorporated into the mixer-settler computer model PUBG, and in the simulation of a 20-stage 1B partitioning contactor, calculated product stream concentrations were in excellent agreement with experiment. Earlier mixer-settler computer models, which failed to account for U(IV) distribution coefficients, predicted that U(IV) remained in the aqueous product stream, which is contrary to the experimental measurements
Braschel, Melissa C; Svec, Ivana; Darlington, Gerarda A; Donner, Allan
2016-04-01
Many investigators rely on previously published point estimates of the intraclass correlation coefficient rather than on their associated confidence intervals to determine the required size of a newly planned cluster randomized trial. Although confidence interval methods for the intraclass correlation coefficient that can be applied to community-based trials have been developed for a continuous outcome variable, fewer methods exist for a binary outcome variable. The aim of this study is to evaluate confidence interval methods for the intraclass correlation coefficient applied to binary outcomes in community intervention trials enrolling a small number of large clusters. Existing methods for confidence interval construction are examined and compared to a new ad hoc approach based on dividing clusters into a large number of smaller sub-clusters and subsequently applying existing methods to the resulting data. Monte Carlo simulation is used to assess the width and coverage of confidence intervals for the intraclass correlation coefficient based on Smith's large sample approximation of the standard error of the one-way analysis of variance estimator, an inverted modified Wald test for the Fleiss-Cuzick estimator, and intervals constructed using a bootstrap-t applied to a variance-stabilizing transformation of the intraclass correlation coefficient estimate. In addition, a new approach is applied in which clusters are randomly divided into a large number of smaller sub-clusters with the same methods applied to these data (with the exception of the bootstrap-t interval, which assumes large cluster sizes). These methods are also applied to a cluster randomized trial on adolescent tobacco use for illustration. When applied to a binary outcome variable in a small number of large clusters, existing confidence interval methods for the intraclass correlation coefficient provide poor coverage. However, confidence intervals constructed using the new approach combined with Smith
Directory of Open Access Journals (Sweden)
Chiba Shigeru
2007-09-01
Full Text Available Abstract Background Computer graphics and virtual reality techniques are useful to develop automatic and effective rehabilitation systems. However, a kind of virtual environment including unstable visual images presented to wide field screen or a head mounted display tends to induce motion sickness. The motion sickness induced in using a rehabilitation system not only inhibits effective training but also may harm patients' health. There are few studies that have objectively evaluated the effects of the repetitive exposures to these stimuli on humans. The purpose of this study is to investigate the adaptation to visually induced motion sickness by physiological data. Methods An experiment was carried out in which the same video image was presented to human subjects three times. We evaluated changes of the intensity of motion sickness they suffered from by a subjective score and the physiological index ρmax, which is defined as the maximum cross-correlation coefficient between heart rate and pulse wave transmission time and is considered to reflect the autonomic nervous activity. Results The results showed adaptation to visually-induced motion sickness by the repetitive presentation of the same image both in the subjective and the objective indices. However, there were some subjects whose intensity of sickness increased. Thus, it was possible to know the part in the video image which related to motion sickness by analyzing changes in ρmax with time. Conclusion The physiological index, ρmax, will be a good index for assessing the adaptation process to visually induced motion sickness and may be useful in checking the safety of rehabilitation systems with new image technologies.
HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient.
Yang, Tao; Zhang, Feipeng; Yardımcı, Galip Gürkan; Song, Fan; Hardison, Ross C; Noble, William Stafford; Yue, Feng; Li, Qunhua
2017-11-01
Hi-C is a powerful technology for studying genome-wide chromatin interactions. However, current methods for assessing Hi-C data reproducibility can produce misleading results because they ignore spatial features in Hi-C data, such as domain structure and distance dependence. We present HiCRep, a framework for assessing the reproducibility of Hi-C data that systematically accounts for these features. In particular, we introduce a novel similarity measure, the stratum adjusted correlation coefficient (SCC), for quantifying the similarity between Hi-C interaction matrices. Not only does it provide a statistically sound and reliable evaluation of reproducibility, SCC can also be used to quantify differences between Hi-C contact matrices and to determine the optimal sequencing depth for a desired resolution. The measure consistently shows higher accuracy than existing approaches in distinguishing subtle differences in reproducibility and depicting interrelationships of cell lineages. The proposed measure is straightforward to interpret and easy to compute, making it well-suited for providing standardized, interpretable, automatable, and scalable quality control. The freely available R package HiCRep implements our approach. © 2017 Yang et al.; Published by Cold Spring Harbor Laboratory Press.
Mohamed Salleh, Faridah Hani; Arif, Shereena Mohd; Zainudin, Suhaila; Firdaus-Raih, Mohd
2015-12-01
A gene regulatory network (GRN) is a large and complex network consisting of interacting elements that, over time, affect each other's state. The dynamics of complex gene regulatory processes are difficult to understand using intuitive approaches alone. To overcome this problem, we propose an algorithm for inferring the regulatory interactions from knock-out data using a Gaussian model combines with Pearson Correlation Coefficient (PCC). There are several problems relating to GRN construction that have been outlined in this paper. We demonstrated the ability of our proposed method to (1) predict the presence of regulatory interactions between genes, (2) their directionality and (3) their states (activation or suppression). The algorithm was applied to network sizes of 10 and 50 genes from DREAM3 datasets and network sizes of 10 from DREAM4 datasets. The predicted networks were evaluated based on AUROC and AUPR. We discovered that high false positive values were generated by our GRN prediction methods because the indirect regulations have been wrongly predicted as true relationships. We achieved satisfactory results as the majority of sub-networks achieved AUROC values above 0.5. Copyright © 2015 Elsevier Ltd. All rights reserved.
Mehta, Shraddha; Bastero-Caballero, Rowena F; Sun, Yijun; Zhu, Ray; Murphy, Diane K; Hardas, Bhushan; Koch, Gary
2018-04-29
Many published scale validation studies determine inter-rater reliability using the intra-class correlation coefficient (ICC). However, the use of this statistic must consider its advantages, limitations, and applicability. This paper evaluates how interaction of subject distribution, sample size, and levels of rater disagreement affects ICC and provides an approach for obtaining relevant ICC estimates under suboptimal conditions. Simulation results suggest that for a fixed number of subjects, ICC from the convex distribution is smaller than ICC for the uniform distribution, which in turn is smaller than ICC for the concave distribution. The variance component estimates also show that the dissimilarity of ICC among distributions is attributed to the study design (ie, distribution of subjects) component of subject variability and not the scale quality component of rater error variability. The dependency of ICC on the distribution of subjects makes it difficult to compare results across reliability studies. Hence, it is proposed that reliability studies should be designed using a uniform distribution of subjects because of the standardization it provides for representing objective disagreement. In the absence of uniform distribution, a sampling method is proposed to reduce the non-uniformity. In addition, as expected, high levels of disagreement result in low ICC, and when the type of distribution is fixed, any increase in the number of subjects beyond a moderately large specification such as n = 80 does not have a major impact on ICC. Copyright © 2018 John Wiley & Sons, Ltd.
Büttner, Kathrin; Salau, Jennifer; Krieter, Joachim
2016-01-01
The average topological overlap of two graphs of two consecutive time steps measures the amount of changes in the edge configuration between the two snapshots. This value has to be zero if the edge configuration changes completely and one if the two consecutive graphs are identical. Current methods depend on the number of nodes in the network or on the maximal number of connected nodes in the consecutive time steps. In the first case, this methodology breaks down if there are nodes with no edges. In the second case, it fails if the maximal number of active nodes is larger than the maximal number of connected nodes. In the following, an adaption of the calculation of the temporal correlation coefficient and of the topological overlap of the graph between two consecutive time steps is presented, which shows the expected behaviour mentioned above. The newly proposed adaption uses the maximal number of active nodes, i.e. the number of nodes with at least one edge, for the calculation of the topological overlap. The three methods were compared with the help of vivid example networks to reveal the differences between the proposed notations. Furthermore, these three calculation methods were applied to a real-world network of animal movements in order to detect influences of the network structure on the outcome of the different methods.
Energy Technology Data Exchange (ETDEWEB)
Oh, Ji-Won, E-mail: fromentin@naver.com [Department of Radiology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of); Rha, Sung Eun, E-mail: serha@catholic.ac.kr [Department of Radiology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of); Oh, Soon Nam, E-mail: hiohsn@catholic.ac.kr [Department of Radiology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of); Park, Michael Yong, E-mail: digirave@kmle.com [Department of Radiology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of); Byun, Jae Young, E-mail: jybyun@catholic.ac.kr [Department of Radiology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of); Lee, Ahwon, E-mail: klee@catholic.ac.kr [Department of Hospital Pathology, Seoul St. Mary' s Hospital, College of Medicine, The Catholic University of Korea, 222 Banpo-daero, Seocho-gu, Seoul 137-701 (Korea, Republic of)
2015-04-15
Highlights: •The solid component of all invasive epithelial cancers showed high b{sub 1000} signal intensity. •ADCs can predict the histologic grade of epithelial ovarian cancer. •ADCs correlate negatively to the surgical stage of epithelial ovarian cancer. •ADCs may be useful imaging biomarkers to assess epithelial ovarian cancer. -- Abstract: Objective: The purpose of this article is to correlate the apparent diffusion coefficient (ADC) values of epithelial ovarian cancers with histologic grade and surgical stage. Materials and methods: We enrolled 43 patients with pathologically proven epithelial ovarian cancers for this retrospective study. All patients underwent preoperative pelvic magnetic resonance imaging (MRI) including diffusion-weighted images with b value of 0 and 1000 s/mm{sup 2} at 3.0-T unit. The mean ADC values of the solid portion of the tumor were measured and compared among different histologic grades and surgical stages. Results: The mean ADC values of epithelial ovarian cancers differed significantly between grade 1 (well-differentiated) and grade 2 (moderately-differentiated) (P = 0.013) as well as between grade 1 and grade 3 (poorly-differentiated) (P = 0.01); however, no statistically significant difference existed between grade 2 and grade 3 (P = 0.737). The receiver-operating characteristic analysis indicated that a cutoff ADC value of less than or equal to 1.09 × 10{sup −3} mm{sup 2}/s was associated with 94.4% sensitivity and 85.7% specificity in distinguishing grade 1 and grade 2/3 cancer. The difference in mean ADC values was statistically significant for early stage (FIGO stage I) and advanced stage (FIGO stage II-IV) cancer (P = 0.011). The interobserver agreement for the mean ADC values of epithelial ovarian cancers was excellent. Conclusion: The mean ADC values of the solid portion of epithelial ovarian cancers negatively correlated to histologic grade and surgical stage. The mean ADC values may be useful imaging
International Nuclear Information System (INIS)
Pazuki, G.R.
2005-01-01
In this study, osmotic coefficients and water activities in aqueous solutions have been modeled using a new approach based on the Pitzer model. This model contains two physically significant ionic parameters regarding ionic solvation and the closest distance of approach between ions in a solution. The proposed model was evaluated by estimating the osmotic coefficients of nine electrolytes in aqueous solutions. The obtained results showed that the model is suitable for predicting the osmotic coefficients in aqueous electrolyte solutions. Using adjustable parameters, which have been calculated from regression between the experimental osmotic coefficient and the results of this model, the water activity coefficients of aqueous solutions were calculated. The average absolute relative deviations of the osmotic coefficients between the experimental data and the calculated results were in agreement
Deng, Xin-Sheng; Ji, Fei; Yang, Shi-Ming
2014-02-01
The maximum phonetically balanced word recognition score (PBmax) showed poor correlation with pure-tone thresholds in presbycusis patients older than 80 years. To study the characteristics of monosyllable recognition in presbycusis patients older than 80 years of age. Thirty presbycusis patients older than 80 years were included as the test group (group 80+). Another 30 patients aged 60-80 years were selected as the control group (group 80-) . PBmax was tested by Mandarin monosyllable recognition test materials with the signal level at 30 dB above the averaged thresholds of 0.5, 1, 2, and 4 kHz (4FA) or the maximum comfortable level. The PBmax values of the test group and control group were compared with each other and the correlation between PBmax and predicted maximum speech recognition scores based on 4FA (PBmax-predict) were statistically analyzed. Under the optimal test conditions, the averaged PBmax was (77.3 ± 16.7) % for group 80- and (52.0 ± 25.4) % for group 80+ (p < 0.001). The PBmax of group 80- was significantly correlated with PBmax-predict (Spearman correlation = 0.715, p < 0.001). The score for group 80+ was less statistically correlated with PBmax-predict (Spearman correlation = 0.572, p = 0.001).
Directory of Open Access Journals (Sweden)
H. R Salemi
2017-06-01
Full Text Available Introduction Water crisis as a main factor of agronomy limitation exists in all over the arid and semiarid regions such as Isfahan province which is located in the central part of the Zayandehrud River Basin. This study aimed to use path analysis and indices of drought to evaluate the correlation coefficients between main physiological parameter (grain yield with yield components and water use efficiency of winter wheat under three water conditions. Materials and Methods The experiment was carried out in Kaboutar Abad Agricultural Research Station, Isfahan in the central region of Iran (32º 31’N, 51º 51’E is located at the altitude of 1545 m above the sea level with a split plot in a randomized complete block design (RCBD with three replications in three cropping seasons on irrigated wheat cultivars. The treatments were included three levels of irrigation (60%FI, 80%FI and full irrigation as main plots and six wheat cultivars (Pishtaz, Shiraz, Sepahan, Marvdasht, Mahdavi and BC-Roshan as sub plots. Grain yield, straw and stubble, biological yield, harvest index (H.I., productivity degree (P.D., water use efficiency (WUE, plant height, grain number per spike, spike number per m2 and TGW were determined. Winter wheat cultivars were sown at the beginning of November and harvested in mid-June of the following year. The seed rate was 400 seed m-2, with a row spacing of 0.75 m. The first irrigation was by furrow method, implemented one day after seeding. Seeds emergence was observed about 5 days later. The N application was 250, 200 and 300 kgha-1 of N (urea at 46% N for each year divided into installments (10 days before planting, 30 days after planting, and every 30 days until the last irrigation. The P2O5 (phosphate ammonium and super-phosphate triple application to soil was 200, 100 and 50 kg ha-1 during the 3 years, respectively. At this stage, cultivation was done to mix the fertilizers with top soil manually. Pests and weeds were
International Nuclear Information System (INIS)
Kaminsky, M.; Das, S.K.; Fenske, G.
1976-01-01
In these experiments a systematic study of the correlation of the skin thickness measured directly by scanning electron microscopy with both the calculated projected-range values and the maximum in the damage-energy distribution has been conducted for a broad helium-ion energy range (100 keV-1000 keV in polycrystalline vanadium. (Auth.)
Schellart, W. P.; Rawlinson, N.
2013-01-01
The maximum earthquake magnitude recorded for subduction zone plate boundaries varies considerably on Earth, with some subduction zone segments producing giant subduction zone thrust earthquakes (e.g. Chile, Alaska, Sumatra-Andaman, Japan) and others producing relatively small earthquakes (e.g.
DEFF Research Database (Denmark)
Silvennoinen, Annestiina; Terasvirta, Timo
A new multivariate volatility model that belongs to the family of conditional correlation GARCH models is introduced. The GARCH equations of this model contain a multiplicative deterministic component to describe long-run movements in volatility and, in addition, the correlations...
Bauer, Jonathan T; Koziol, Liz; Bever, James D
2018-02-01
Many plant species are limited to habitats relatively unaffected by anthropogenic disturbance, so protecting these undisturbed habitats is essential for plant conservation. Coefficients of conservatism (C values) were developed as indicators of a species' sensitivity to anthropogenic disturbance, and these values are used in Floristic Quality Assessment as a means of assessing natural areas and ecological restoration. However, assigning of these values is subjective and improved quantitative validation of C values is needed. We tested whether there are consistent differences in life histories between species with high and low C values. To do this, we grew 54 species of tallgrass prairie plants in a greenhouse and measured traits that are associated with trade-offs on the fast-slow continuum of life-history strategies. We also grew plants with and without mycorrhizal fungi as a test of these species' reliance on this mutualism. We compared these traits and mycorrhizal responsiveness to C values. We found that six of the nine traits we measured were correlated with C values, and together, traits predicted up to 50 % of the variation in C values. Traits including fast growth rates and greater investment in reproduction were associated with lower C values, and slow growth rates, long-lived leaves and high root:shoot ratios were associated with higher C values. Additionally, plants with high C values and a slow life history were more responsive to mutualisms with mycorrhizal fungi. Overall, our results connect C values with life-history trade-offs, indicating that high C value species tend to share a suite of traits associated with a slow life history.
Keat, W. J.; Westbrook, C. D.
2017-11-01
Pristine ice crystals typically have high aspect ratios (≫ 1), have a high density and tend to fall preferentially with their major axis aligned horizontally. Consequently, they can, in certain circumstances, be readily identified by measurements of differential reflectivity (ZDR), which is related to their average aspect ratio. However, because ZDR is reflectivity weighted, its interpretation becomes ambiguous in the presence of even a few, larger aggregates or irregular polycrystals. An example of this is in mixed-phase regions that are embedded within deeper ice cloud. Currently, our understanding of the microphysical processes within these regions is hindered by a lack of good observations. In this paper, a novel technique is presented that removes this ambiguity using measurements from the 3 GHz Chilbolton Advanced Meteorological Radar in Southern England. By combining measurements of ZDR and the copolar correlation coefficient (ρhv), we show that it is possible to retrieve both the relative contribution to the radar signal and "intrinsic" ZDR (ZDRIP) of the pristine oriented crystals, even in circumstances where their signal is being masked by the presence of aggregates. Results from two case studies indicate that enhancements in ZDR embedded within deep ice clouds are typically produced by pristine oriented crystals with ZDRIP values between 3 and 7 dB (equivalent to 5-9 dB at horizontal incidence) but with varying contributions to the radar reflectivity. Vertically pointing 35 GHz cloud radar Doppler spectra and in situ particle images from the Facility for Airborne Atmospheric Measurements BAe-146 aircraft support the conceptual model used and are consistent with the retrieval interpretation.
Suo, Shi-Teng; Chen, Xiao-Xi; Fan, Yu; Wu, Lian-Ming; Yao, Qiu-Ying; Cao, Meng-Qiu; Liu, Qiang; Xu, Jian-Rong
2014-08-01
To investigate the potential value of histogram analysis of apparent diffusion coefficient (ADC) obtained at standard (700 s/mm(2)) and high (1500 s/mm(2)) b values on a 3.0-T scanner in the differentiation of bladder cancer from benign lesions and in assessing bladder tumors of different pathologic T stages and to evaluate the diagnostic performance of ADC-based histogram parameters. In all, 52 patients with bladder lesions, including benign lesions (n = 7) and malignant tumors (n = 45; T1 stage or less, 23; T2 stage, 7; T3 stage, 8; and T4 stage, 7), were retrospectively evaluated. Magnetic resonance examination at 3.0 T and diffusion-weighted imaging were performed. ADC maps were obtained at two b values (b = 700 and 1500 s/mm(2); ie, ADC-700 and ADC-1500). Parameters of histogram analysis included mean, kurtosis, skewness, and entropy. The correlations between these parameters and pathologic results were revealed. Receiver operating characteristic (ROC) curves were generated to determine the diagnostic value of histogram parameters. Significant differences were found in mean ADC-700, mean ADC-1500, skewness ADC-1500, and kurtosis ADC-1500 between bladder cancer and benign lesions (P = .002-.032). There were also significant differences in mean ADC-700, mean ADC-1500, and kurtosis ADC-1500 among bladder tumors of different pathologic T stages (P = .000-.046). No significant differences were observed in other parameters. Mean ADC-1500 and kurtosis ADC-1500 were significantly correlated with T stage, respectively (ρ = -0.614, P Histogram analysis of ADC-1500 at 3.0 T can be useful in evaluation of bladder lesions. A combination of mean ADC-1500 and kurtosis ADC-1500 may be more beneficial in the differentiation of benign and malignant lesions. Mean ADC-1500 was the most promising parameter for differentiating low- from high-stage bladder cancer. Copyright © 2014 AUR. Published by Elsevier Inc. All rights reserved.
International Nuclear Information System (INIS)
Lee, Jeong-Hun; Cho, Hyoung-Kyu; Park, Goon-Cherl
2016-01-01
Highlights: • Cross flow experimental data are produced with wedge-shaped and parallel gaps. • The results of a CFD analysis and experimental data are in good agreement. • Pressure loss coefficient for the cross gap between fuel blocks in PMR200 is found. • A new correlation of the cross flow loss coefficient for PMR200 is proposed. - Abstract: The core of the very high temperature reactor (VHTR) PMR200 (a prismatic modular reactor rated at 200 MW of thermal power) consists of hexagonal prismatic fuel blocks and reflector blocks made of graphite. If the core bypass flow ratio increases, the coolant channel flow is decreased and can then lower the heat removal efficiency, resulting in a locally increased fuel block temperature. The coolant channels in the fuel blocks are connected to bypass gaps by the cross gap, complicating flow distribution in the VHTR core. Therefore, reliable estimation of the bypass flow is highly important for the design and safety analysis of the VHTR core. Because of the complexity of the core geometry and gap configuration, it is challenging to predict the flow distribution in the VHTR core. To analyze this flow distribution accurately, it is necessary to determine the cross flow phenomena, and the loss coefficient across the cross gap has to be evaluated to determine the flow distribution in the VHTR core when a lumped parameter code or a flow network analysis code that uses the correlation of the loss coefficient is employed. The purpose of this paper is to develop a loss coefficient correlation applicable to the cross gap in the PMR200 core. The cross flow was evaluated experimentally using the difference between the measured inlet and outlet mass flow rates. Next, the applicability of a commercial computational fluid dynamics (CFD) code, CFX 15, was confirmed by comparing the experimental data and CFD analysis results. To understand the cross flow phenomena, the loss coefficient was evaluated; in the high Reynolds number region
Energy Technology Data Exchange (ETDEWEB)
Lee, Jeong-Hun, E-mail: huny12@snu.ac.kr; Cho, Hyoung-Kyu, E-mail: chohk@snu.ac.kr; Park, Goon-Cherl, E-mail: parkgc@snu.ac.kr
2016-10-15
Highlights: • Cross flow experimental data are produced with wedge-shaped and parallel gaps. • The results of a CFD analysis and experimental data are in good agreement. • Pressure loss coefficient for the cross gap between fuel blocks in PMR200 is found. • A new correlation of the cross flow loss coefficient for PMR200 is proposed. - Abstract: The core of the very high temperature reactor (VHTR) PMR200 (a prismatic modular reactor rated at 200 MW of thermal power) consists of hexagonal prismatic fuel blocks and reflector blocks made of graphite. If the core bypass flow ratio increases, the coolant channel flow is decreased and can then lower the heat removal efficiency, resulting in a locally increased fuel block temperature. The coolant channels in the fuel blocks are connected to bypass gaps by the cross gap, complicating flow distribution in the VHTR core. Therefore, reliable estimation of the bypass flow is highly important for the design and safety analysis of the VHTR core. Because of the complexity of the core geometry and gap configuration, it is challenging to predict the flow distribution in the VHTR core. To analyze this flow distribution accurately, it is necessary to determine the cross flow phenomena, and the loss coefficient across the cross gap has to be evaluated to determine the flow distribution in the VHTR core when a lumped parameter code or a flow network analysis code that uses the correlation of the loss coefficient is employed. The purpose of this paper is to develop a loss coefficient correlation applicable to the cross gap in the PMR200 core. The cross flow was evaluated experimentally using the difference between the measured inlet and outlet mass flow rates. Next, the applicability of a commercial computational fluid dynamics (CFD) code, CFX 15, was confirmed by comparing the experimental data and CFD analysis results. To understand the cross flow phenomena, the loss coefficient was evaluated; in the high Reynolds number region
DEFF Research Database (Denmark)
Larsen, Thomas; Kjeldsen, Peter; Christensen, Thomas Højlund
1992-01-01
area of the aquifer materials as a second regression parameter did not significantly improve the correlation. Estimated Koc values were up to 3 times higher than those predicted from regression equations based on the octanol-water partition coefficient. The reason for this is not known, but may...
Jin, Ying; Myers, Nicholas D.; Ahn, Soyeon
2014-01-01
Previous research has demonstrated that differential item functioning (DIF) methods that do not account for multilevel data structure could result in too frequent rejection of the null hypothesis (i.e., no DIF) when the intraclass correlation coefficient (?) of the studied item was the same as the ? of the total score. The current study extended…
Extinction Coefficient of Gold Nanostars
de Puig, Helena; Tam, Justina O.; Yen, Chun-Wan; Gehrke, Lee; Hamad-Schifferli, Kimberly
2015-01-01
Gold nanostars (NStars) are highly attractive for biological applications due to their surface chemistry, facile synthesis and optical properties. Here, we synthesize NStars in HEPES buffer at different HEPES/Au ratios, producing NStars of different sizes and shapes, and therefore varying optical properties. We measure the extinction coefficient of the synthesized NStars at their maximum surface plasmon resonances (SPR), which range from 5.7 × 108 to 26.8 × 108 M−1cm−1. Measured values correl...
Gray, Heewon Lee; Burgermaster, Marissa; Tipton, Elizabeth; Contento, Isobel R; Koch, Pamela A; Di Noia, Jennifer
2016-04-01
Sample size and statistical power calculation should consider clustering effects when schools are the unit of randomization in intervention studies. The objective of the current study was to investigate how student outcomes are clustered within schools in an obesity prevention trial. Baseline data from the Food, Health & Choices project were used. Participants were 9- to 13-year-old students enrolled in 20 New York City public schools (n= 1,387). Body mass index (BMI) was calculated based on measures of height and weight, and body fat percentage was measured with a Tanita® body composition analyzer (Model SC-331s). Energy balance-related behaviors were self-reported with a frequency questionnaire. To examine the cluster effects, intraclass correlation coefficients (ICCs) were calculated as school variance over total variance for outcome variables. School-level covariates, percentage students eligible for free and reduced-price lunch, percentage Black or Hispanic, and English language learners were added in the model to examine ICC changes. The ICCs for obesity indicators are: .026 for BMI-percentile, .031 for BMIz-score, .035 for percentage of overweight students, .037 for body fat percentage, and .041 for absolute BMI. The ICC range for the six energy balance-related behaviors are .008 to .044 for fruit and vegetables, .013 to .055 for physical activity, .031 to .052 for recreational screen time, .013 to .091 for sweetened beverages, .033 to .121 for processed packaged snacks, and .020 to .083 for fast food. When school-level covariates were included in the model, ICC changes varied from -95% to 85%. This is the first study reporting ICCs for obesity-related anthropometric and behavioral outcomes among New York City public schools. The results of the study may aid sample size estimation for future school-based cluster randomized controlled trials in similar urban setting and population. Additionally, identifying school-level covariates that can reduce cluster
International Nuclear Information System (INIS)
Rahmani, R.
1983-01-01
The nucleate boiling heat-transfer coefficient and the maximum heat flux were studied experimentally as functions of velocity, quality and heater diameter for single-phase flow, and two-phase flow of Freon-113 (trichlorotrifluorethane). Results show: (1) peak heat flux: over 300 measured peak heat flux data from two 0.875-in. and four 0.625-in.-diameter heaters indicated that: (a) for pool boiling, single-phase and two-phase forced convection boiling the only parameter (among hysteresis, rate of power increase, aging, presence and proximity of unheated rods) that has a statistically significant effect on the peak heat flux is the velocity. (b) In the velocity range (0 0 position or the point of impact of the incident fluid) and the top (180 0 position) of the test element, respectively
Chirico, Nicola; Gramatica, Paola
2011-09-26
The main utility of QSAR models is their ability to predict activities/properties for new chemicals, and this external prediction ability is evaluated by means of various validation criteria. As a measure for such evaluation the OECD guidelines have proposed the predictive squared correlation coefficient Q(2)(F1) (Shi et al.). However, other validation criteria have been proposed by other authors: the Golbraikh-Tropsha method, r(2)(m) (Roy), Q(2)(F2) (Schüürmann et al.), Q(2)(F3) (Consonni et al.). In QSAR studies these measures are usually in accordance, though this is not always the case, thus doubts can arise when contradictory results are obtained. It is likely that none of the aforementioned criteria is the best in every situation, so a comparative study using simulated data sets is proposed here, using threshold values suggested by the proponents or those widely used in QSAR modeling. In addition, a different and simple external validation measure, the concordance correlation coefficient (CCC), is proposed and compared with other criteria. Huge data sets were used to study the general behavior of validation measures, and the concordance correlation coefficient was shown to be the most restrictive. On using simulated data sets of a more realistic size, it was found that CCC was broadly in agreement, about 96% of the time, with other validation measures in accepting models as predictive, and in almost all the examples it was the most precautionary. The proposed concordance correlation coefficient also works well on real data sets, where it seems to be more stable, and helps in making decisions when the validation measures are in conflict. Since it is conceptually simple, and given its stability and restrictiveness, we propose the concordance correlation coefficient as a complementary, or alternative, more prudent measure of a QSAR model to be externally predictive.
Klöckner, Wolf; Gacem, Riad; Anderlei, Tibor; Raven, Nicole; Schillberg, Stefan; Lattermann, Clemens; Büchs, Jochen
2013-12-02
Among disposable bioreactor systems, cylindrical orbitally shaken bioreactors show important advantages. They provide a well-defined hydrodynamic flow combined with excellent mixing and oxygen transfer for mammalian and plant cell cultivations. Since there is no known universal correlation between the volumetric mass transfer coefficient for oxygen kLa and relevant operating parameters in such bioreactor systems, the aim of this current study is to experimentally determine a universal kLa correlation. A Respiration Activity Monitoring System (RAMOS) was used to measure kLa values in cylindrical disposable shaken bioreactors and Buckingham's π-Theorem was applied to define a dimensionless equation for kLa. In this way, a scale- and volume-independent kLa correlation was developed and validated in bioreactors with volumes from 2 L to 200 L. The final correlation was used to calculate cultivation parameters at different scales to allow a sufficient oxygen supply of tobacco BY-2 cell suspension cultures. The resulting equation can be universally applied to calculate the mass transfer coefficient for any of seven relevant cultivation parameters such as the reactor diameter, the shaking frequency, the filling volume, the viscosity, the oxygen diffusion coefficient, the gravitational acceleration or the shaking diameter within an accuracy range of +/- 30%. To our knowledge, this is the first kLa correlation that has been defined and validated for the cited bioreactor system on a bench-to-pilot scale.
Hu, Hui; Lu, Hong; He, Zhanping; Han, Xiangjun; Chen, Jing; Tu, Rong
2012-07-25
To investigate the effects of mRNA interference on aquaporin-4 expression in swollen tissue of rats with ischemic cerebral edema, and diagnose the significance of diffusion-weighted MRI, we injected 5 μL shRNA- aquaporin-4 (control group) or siRNA- aquaporin-4 solution (1:800) (RNA interference group) into the rat right basal ganglia immediately before occlusion of the middle cerebral artery. At 0.25 hours after occlusion of the middle cerebral artery, diffusion-weighted MRI displayed a high signal; within 2 hours, the relative apparent diffusion coefficient decreased markedly, aquaporin-4 expression increased rapidly, and intracellular edema was obviously aggravated; at 4 and 6 hours, the relative apparent diffusion coefficient slowly returned to control levels, aquaporin-4 expression slightly increased, and angioedema was observed. In the RNA interference group, during 0.25-6 hours after injection of siRNA- aquaporin-4 solution, the relative apparent diffusion coefficient slightly fluctuated and aquaporin-4 expression was upregulated; during 0.5-4 hours, the relative apparent diffusion coefficient was significantly higher, while aquaporin-4 expression was significantly lower when compared with the control group, and intracellular edema was markedly reduced; at 0.25 and 6 hours, the relative apparent diffusion coefficient and aquaporin-4 expression were similar when compared with the control group; obvious angioedema remained at 6 hours. Pearson's correlation test results showed that aquaporin-4 expression was negatively correlated with the apparent diffusion coefficient (r = -0.806, P coefficient. Aquaporin-4 gene interference can effectively inhibit the upregulation of aquaporin-4 expression during the stage of intracellular edema with time-effectiveness. Moreover, diffusion-weighted MRI can accurately detect intracellular edema.
Eslami, Taban; Saeed, Fahad
2018-04-20
Functional magnetic resonance imaging (fMRI) is a non-invasive brain imaging technique, which has been regularly used for studying brain’s functional activities in the past few years. A very well-used measure for capturing functional associations in brain is Pearson’s correlation coefficient. Pearson’s correlation is widely used for constructing functional network and studying dynamic functional connectivity of the brain. These are useful measures for understanding the effects of brain disorders on connectivities among brain regions. The fMRI scanners produce huge number of voxels and using traditional central processing unit (CPU)-based techniques for computing pairwise correlations is very time consuming especially when large number of subjects are being studied. In this paper, we propose a graphics processing unit (GPU)-based algorithm called Fast-GPU-PCC for computing pairwise Pearson’s correlation coefficient. Based on the symmetric property of Pearson’s correlation, this approach returns N ( N − 1 ) / 2 correlation coefficients located at strictly upper triangle part of the correlation matrix. Storing correlations in a one-dimensional array with the order as proposed in this paper is useful for further usage. Our experiments on real and synthetic fMRI data for different number of voxels and varying length of time series show that the proposed approach outperformed state of the art GPU-based techniques as well as the sequential CPU-based versions. We show that Fast-GPU-PCC runs 62 times faster than CPU-based version and about 2 to 3 times faster than two other state of the art GPU-based methods.
DEFF Research Database (Denmark)
Friisberg, Ida Marie; Costigliola, Lorenzo; Dyre, Jeppe C.
2017-01-01
This paper investigates the relation between the density-scaling exponent γ and the virial potentialenergy coefficient R at several thermodynamic state points in three dimensions for the generalized (2n, n) Lennard-Jones (LJ) system for n = 4, 9, 12, 18, as well as for the standard n = 6 LJ syste...
Energy Technology Data Exchange (ETDEWEB)
Shafaghat, R.; Hosseinalipour, S.M.; Derakhshani, S.M.E. [Iran University of Science and Technology, Department of Mechanical Engineering, Tehran (Iran)
2010-07-15
Artificial neural networks (ANNs) are used as a new approach for the determination of the relations between drag coefficient and Cavitation Number with cavity geometry in supercavitating flows which have been most widely used in the hydrodynamics researches. Also the result of the ANNs as a cost function potentially will be used in an optimization algorithm. Instead of complex differential equations and limited experimental data, faster and simpler solutions were obtained using equations derived from the ANN model. For training of the ANN the numerical results are used that are obtained from a boundary element method (BEM). At this problem, a two-dimensional supercavitation potential inviscid flow pasts a symmetric two-dimensional cavitator, which is placed perpendicular to the flow in a channel of infinite width and immediately a cavity is formed behind the cavitator. It was found that the coefficient of multiple determination (R{sup 2}-value) between the actual and ANN predicted data is equal to about 0.9998 for the drag coefficient and Cavitation number. As seen from the obtained results, the calculated cavity geometry for all drag coefficients and Cavitation Numbers are obviously within acceptable limits. (orig.)
Pedersen, J. M.; Tegner, C.; Kent, A. J.; Ulrich, T.
2017-12-01
The opening of the North Atlantic Ocean between Greenland and Norway during the lower Tertiary led to intense flood basalt volcanism and the emplacement of the North Atlantic Igneous Province (NAIP). The volcanism is temporally overlapping with the Paleocene-Eocene Thermal Maximum (PETM), but ash stratigraphy and geochronology suggests that the main flood basalt sequence in East Greenland postdates the PETM. Significant environmental changes during the PETM have been attributed to the release of CO2 or methane gas due to either extensive melting of hydrates at the ocean floor or as a consequence of the interaction of mantle derived magmas with carbon rich sediments.Estimates suggest that a minimum of 1.8x106 km3 of basaltic lava erupted during North Atlantic flood basalt volcanism. Based on measurements of melt inclusions from the flood basalts our preliminary calculations suggest that approximately 2300 Gt of SO2 and 600 Gt of HCl were released into the atmosphere. Calculated yearly fluxes approach 23 Mt/y SO2 and 6 Mt/y HCl. These estimates are regarded as conservative.The S released into to the atmosphere during flood basalt volcanism can form acid aerosols that absorb and reflect solar radiation, causing an effective cooling effect. The climatic effects of the release of Cl into the atmosphere are not well constrained, but may be an important factor for extinction scenarios due to destruction of the ozone layer.The climatic changes due to the release of S and Cl in these amounts, and for periods extending for hundred thousand of years, although not yet fully constrained are likely to be significant. One consequence of the North Atlantic flood basalt volcanism may have been the initiation of global cooling to end the PETM.
International Nuclear Information System (INIS)
Kamei-Ishikawa, N.; Uchida, S.; Tagami, K.
2008-01-01
In this work, soil-soil solution distribution coefficients (K d ) of Sr and Cs were obtained for 112 Japanese agricultural soil samples (50 paddy soil and 62 upland soil samples) using batch sorption test. The relationships between Sr- or Cs-K d values and soil properties were discussed. Furthermore, the amount of Cs fixed in soil was estimated for 22 selected soil samples using a sequential extraction method. Then, cross effects of some soil properties for Cs fixation were evaluated. (author)
International Nuclear Information System (INIS)
Marten, K.; Yonekawa, S.; Hoffmann, H.
1987-05-01
Advanced pressurized water reactors as well as sodium cooled fast reactors, in their breeding and absorber elements, use tightly packed rod bundles with hexagonally arranged rods. Helical wires or helical fins serve as spacers. The pressure loss coefficients of twelve bundles with helical wires were determined systematically in water experiments. High measuring accuracy was achieved by very precise fabrication of the bundles and the shroud as well as by investigations of the proper measuring techniques. The results show a dependency of the loss coefficients on the Reynolds number and on the P/D and H/D ratios of the bundles. These results together with available systematic experimental results of investigations at P/D > 1.1 were used to develop a correlation to determine the pressure loss coefficients of tightly and widely packed hexagonally arranged rod bundles with helical wire spacers. These correlations were used to recalculate and compare results of pressure loss investigations found in the literature; good agreement was demonstrated. Hence, calculation methods exist for a broad range of applications to determine the pressure loss coefficients of hexagonally arranged rod bundles with helical wires for spacers. (orig./HP) [de
International Nuclear Information System (INIS)
Okuno, Hiroshi
2003-01-01
A method for classifying benchmark results of criticality calculations according to similarity was proposed in this paper. After formulation of the method utilizing correlation coefficients, it was applied to burnup credit criticality benchmarks Phase III-A and II-A, which were conducted by the Expert Group on Burnup Credit Criticality Safety under auspices of the Nuclear Energy Agency of the Organisation for Economic Cooperation and Development (OECD/NEA). Phase III-A benchmark was a series of criticality calculations for irradiated Boiling Water Reactor (BWR) fuel assemblies, whereas Phase II-A benchmark was a suite of criticality calculations for irradiated Pressurized Water Reactor (PWR) fuel pins. These benchmark problems and their results were summarized. The correlation coefficients were calculated and sets of benchmark calculation results were classified according to the criterion that the values of the correlation coefficients were no less than 0.15 for Phase III-A and 0.10 for Phase II-A benchmarks. When a couple of benchmark calculation results belonged to the same group, one calculation result was found predictable from the other. An example was shown for each of the Benchmarks. While the evaluated nuclear data seemed the main factor for the classification, further investigations were required for finding other factors. (author)
Echavarría-Heras, Héctor; Leal-Ramírez, Cecilia; Villa-Diharce, Enrique; Castillo, Oscar
2014-01-01
Eelgrass is a cosmopolitan seagrass species that provides important ecological services in coastal and near-shore environments. Despite its relevance, loss of eelgrass habitats is noted worldwide. Restoration by replanting plays an important role, and accurate measurements of the standing crop and productivity of transplants are important for evaluating restoration of the ecological functions of natural populations. Traditional assessments are destructive, and although they do not harm natural populations, in transplants the destruction of shoots might cause undesirable alterations. Non-destructive assessments of the aforementioned variables are obtained through allometric proxies expressed in terms of measurements of the lengths or areas of leaves. Digital imagery could produce measurements of leaf attributes without the removal of shoots, but sediment attachments, damage infringed by drag forces or humidity contents induce noise-effects, reducing precision. Available techniques for dealing with noise caused by humidity contents on leaves use the concepts of adjacency, vicinity, connectivity and tolerance of similarity between pixels. Selection of an interval of tolerance of similarity for efficient measurements requires extended computational routines with tied statistical inferences making concomitant tasks complicated and time consuming. The present approach proposes a simplified and cost-effective alternative, and also a general tool aimed to deal with any sort of noise modifying eelgrass leaves images. Moreover, this selection criterion relies only on a single statistics; the calculation of the maximum value of the Concordance Correlation Coefficient for reproducibility of observed areas of leaves through proxies obtained from digital images. Available data reveals that the present method delivers simplified, consistent estimations of areas of eelgrass leaves taken from noisy digital images. Moreover, the proposed procedure is robust because both the optimal
Nadeem, Qurrat-Ul-Ain; Kammoun, Abla; Debbah, Merouane; Alouini, Mohamed-Slim
2015-01-01
Previous studies have confirmed the adverse impact of fading correlation on the mutual information (MI) of two-dimensional (2D) multiple-input multiple-output (MIMO) systems. More recently, the trend is to enhance the system performance
Directory of Open Access Journals (Sweden)
Mary Hokazono
Full Text Available CONTEXT AND OBJECTIVE: Transcranial Doppler (TCD detects stroke risk among children with sickle cell anemia (SCA. Our aim was to evaluate TCD findings in patients with different sickle cell disease (SCD genotypes and correlate the time-averaged maximum mean (TAMM velocity with hematological characteristics. DESIGN AND SETTING: Cross-sectional analytical study in the Pediatric Hematology sector, Universidade Federal de São Paulo. METHODS: 85 SCD patients of both sexes, aged 2-18 years, were evaluated, divided into: group I (62 patients with SCA/Sß0 thalassemia; and group II (23 patients with SC hemoglobinopathy/Sß+ thalassemia. TCD was performed and reviewed by a single investigator using Doppler ultrasonography with a 2 MHz transducer, in accordance with the Stroke Prevention Trial in Sickle Cell Anemia (STOP protocol. The hematological parameters evaluated were: hematocrit, hemoglobin, reticulocytes, leukocytes, platelets and fetal hemoglobin. Univariate analysis was performed and Pearson's coefficient was calculated for hematological parameters and TAMM velocities (P < 0.05. RESULTS: TAMM velocities were 137 ± 28 and 103 ± 19 cm/s in groups I and II, respectively, and correlated negatively with hematocrit and hemoglobin in group I. There was one abnormal result (1.6% and five conditional results (8.1% in group I. All results were normal in group II. Middle cerebral arteries were the only vessels affected. CONCLUSION: There was a low prevalence of abnormal Doppler results in patients with sickle-cell disease. Time-average maximum mean velocity was significantly different between the genotypes and correlated with hematological characteristics.
Serebrov, A. P.; Zherebtsov, O. M.; Klyushnikov, G. N.
2018-05-01
An experiment on the measurement of the ratio of the axial coupling constant to the vector one is under development. The main idea of the experiment is to measure the values of A and B in the same setup. An additional measurement of the polarization is not necessary. The accuracy achieved to date in measuring λ is 2 × 10-3. It is expected that in the experiment the accuracy will be of the order of 10-4. Some particular problems of mathematical modeling concerning the experiment on the measurement of the ratio of the axial coupling constant to the vector one are considered. The force lines for the given tabular field of a magnetic trap are studied. The dependences of the longitudinal and transverse field non-uniformity coefficients on the coordinates are regarded. A special computational algorithm based on the law of a charged particle motion along a local magnetic force line is performed for the calculation of the electrons and protons motion time as well as for the evaluation of the total number of electrons colliding with the detector surface. The average values of the cosines of the angles with the coefficients of a, A and B have been estimated.
Hurdebise, Quentin; Heinesch, Bernard; De Ligne, Anne; Vincke, Caroline; Aubinet, Marc
2017-04-01
Long-term data series of carbon dioxide and other gas exchanges between terrestrial ecosystems and atmosphere become more and more numerous. Long-term analyses of such exchanges require a good understanding of measurement conditions during the investigated period. Independently of climate drivers, measurements may indeed be influenced by measurement conditions themselves subjected to long-term variability due to vegetation growth or set-up changes. The present research refers to the Vielsalm Terrestrial Observatory (VTO) an ICOS candidate site located in a mixed forest (beech, silver fir, Douglas fir, Norway spruce) in the Belgian Ardenne. Fluxes of momentum, carbon dioxide and sensible heat have been continuously measured there by eddy covariance for more than 20 years. During this period, changes in canopy height and measurement height occurred. The correlation coefficients (for momemtum, sensible heat and CO2) and the normalized standard deviations measured for the past 20 years at the Vielsalm Terrestrial Observatory (VTO) were analysed in order to define how the fluxes, independently of climate conditions, were affected by the surrounding environment evolution, including tree growth, forest thinning and tower height change. A relationship between canopy aerodynamic distance and the momentum correlation coefficient was found which is characteristic of the roughness sublayer, and suggests that momentum transport processes were affected by z-d. In contrast, no relationship was found for sensible heat and CO2 correlation coefficients, suggesting that the z-d variability observed did not affect their turbulent transport. There were strong differences in these coefficients, however, between two wind sectors, characterized by contrasted stands (height differences, homogeneity) and different hypotheses were raised to explain it. This study highlighted the importance of taking the surrounding environment variability into account in order to ensure the spatio
International Nuclear Information System (INIS)
Borg, Michael
2011-01-01
The β-decay of free neutrons is a strongly over-determined process in the Standard Model (SM) of Particle Physics and is described by a multitude of observables. Some of those observables are sensitive to physics beyond the SM. For example, the correlation coefficients of the involved particles belong to them. The spectrometer aSPECT was designed to measure precisely the shape of the proton energy spectrum and to extract from it the electron anti-neutrino angular correlation coefficient a. A first test period (2005/2006) showed the ''proof-of-principles''. The limiting influence of uncontrollable background conditions in the spectrometer made it impossible to extract a reliable value for the coefficient a (published in 2008). A second measurement cycle (2007/2008) aimed to under-run the relative accuracy of previous experiments (δa)/(a)=5%. I performed the analysis of the data taken there which is the emphasis of this doctoral thesis. A central point are background studies. The systematic impact of background on a was reduced to (δa (syst.) )/(a)=0.61 %. The statistical accuracy of the analyzed measurements is (δa (stat.) )/(a)∼1.4 %. Besides, saturation effects of the detector electronics were investigated which were initially observed. These turned out not to be correctable on a sufficient level. An applicable idea how to avoid the saturation effects is discussed in the last chapter. (orig.)
International Nuclear Information System (INIS)
Herrera A, E.
1994-01-01
In the heat transfer studies by forced convection, we have few data about behavior of the fluids in an annular channel heated by a concentric pipe, such date is necessary to know the heat transfer coefficient that establish the interchange of energy and the thermic properties of the fluid with the geometry of the flow. In this work the objective, was to compare some empirical correlations that we needed for determinate the heat transfer coefficient for annular channels, where we obtained similar at the theoretical results of an experiment made by Miller and Benforado. It is important to know such coefficients because we can determinate the heat quantity transmitted to a probe zone, in which we simulate a nuclear fuel element that developed huge heat quantity that must be dispersed in short time. We give theoretical data of the heat forced transfer convection and we analyzed the phenomena in annular channels given some empirical correlations employed by some investigators and we analyzed each one. (Author)
International Nuclear Information System (INIS)
Siozos, P.; Philippidis, A.; Hadjistefanou, M.; Gounarakis, C.; Anglos, D.
2013-01-01
Laser-induced breakdown spectroscopy (LIBS) was used to determine the mineral composition of various industrial scale samples. The aim of the study has been to investigate the capacity of LIBS to provide a fast, reliable analytical tool for carrying out routine analysis of inorganic scales, potentially on site, as a means to facilitate decision making concerning scale removal procedures. LIBS spectra collected in the range of 200–660 nm conveyed information about the metal content of the minerals. Via a straightforward analysis based on linear correlation of LIBS spectra it was possible to successfully discriminate scale samples into three main groups, Fe-rich, Ca-rich and Ba-rich, on the basis of correlation coefficients. By combining correlation coefficients with spectral data collected in the NIR, 860–960 nm, where sulfur emissions are detected, it became further possible to discriminate sulfates from carbonates as confirmed by independent analysis based on Raman spectroscopy. It is emphasized that the proposed LIBS-based method successfully identifies the major mineral or minerals present in the samples classifying the scales into relevant groups hence enabling process engineers to select appropriate scale dissolution strategies. - Highlights: • LIBS was used to determine the mineral composition of industrial scale samples. • Three groups of inorganic scales were identified: Ca rich, Ba rich and Fe rich. • A method that combines correlation coefficients and line detection is proposed. • The method successfully identifies the main mineral, or minerals, in the samples. • The results were compared with results obtained by use of Raman analysis
Directory of Open Access Journals (Sweden)
Ismael Fernando Meza Castro
2017-07-01
Full Text Available Introduction: This project carried out an experimental research with the design, assembly, and commissioning of a convection heat transfer test bench. Objective: To determine new statistical correlations that allow knowing the heat transfer coefficients by air convection with greater accuracy in applications with different heating geometry configurations. Methodology: Three geometric configurations, such as flat plate, cylinders and tube banks were studied according to their physical properties through Reynolds and Prandtl numbers, using a data transmission interface using Arduino® controllers Measured the air temperature through the duct to obtain real-time data and to relate the heat transferred from the heating element to the fluid and to perform mathematical modeling in specialized statistical software. The study was made for the three geometries mentioned, one power per heating element and two air velocities with 10 repetitions. Results: Three mathematical correlations were obtained with regression coefficients greater than 0.972, one for each heating element, obtaining prediction errors in the heat transfer convective coefficients of 7.50% for the flat plate, 2.85% for the plate Cylindrical and 1.57% for the tube bank. Conclusions: It was observed that in geometries constituted by several individual elements, a much more accurate statistical adjustment was obtained to predict the behavior of the convection heat coefficients, since each unit reaches a stability in the surface temperature profile with Greater speed, giving the geometry in general, a more precise measurement of the parameters that govern the transfer of heat, as it is in the case of the geometry of the tube bank.
Wang, G J; Wang, Y; Ye, Y; Chen, F; Lu, Y T; Li, S L
2017-11-07
Objective: To investigate the features of apparent diffusion coefficient (ADC) histogram parameters based on entire tumor volume data in high resolution diffusion weighted imaging of nasopharyngeal carcinoma (NPC) and to evaluate its correlations with cancer stages. Methods: This retrospective study included 154 cases of NPC patients[102 males and 52 females, mean age (48±11) years]who had received readout segmentation of long variable echo trains of MRI scan before radiation therapy. The area of tumor was delineated on each section of axial ADC maps to generate ADC histogram by using Image J. ADC histogram of entire tumor along with the histogram parameters-the tumor voxels, ADC(mean), ADC(25%), ADC(50%), ADC(75%), skewness and kurtosis were obtained by merging all sections with SPSS 22.0 software. Intra-observer repeatability was assessed by using intra-class correlation coefficients (ICC). The patients were subdivided into two groups according to cancer volume: small cancer group (histogram parameters and cancer stages was evaluated with Spearman test. Results: The ICC of measuring ADC histogram parameters of tumor voxels, ADC(mean), ADC(25%), ADC(50%), ADC(75%), skewness, kurtosis was 0.938, 0.861, 0.885, 0.838, 0.836, 0.358 and 0.456, respectively. The tumor voxels was positively correlated with T staging ( r =0.368, P histogram (ADC(mean), ADC(25%), ADC(50%)) increases with T staging in NPC smaller than 2 cm(3).
International Nuclear Information System (INIS)
Park, Eun Kyung; Cho, Kyu Ran; Seo, Bo Kyoung; Woo, Ok Hee; Cho, Sung Bum; Bae, Jeoung Won
2016-01-01
Breast cancer is a heterogeneous disease with diverse prognoses. The main prognostic determinants are lymph node status, tumor size, histological grade, and biological factors, such as hormone receptors, human epidermal growth factor receptor 2 (HER2), Ki-67 protein levels, and p53 expression. Diffusion-weighted imaging (DWI) can be used to measure the apparent diffusion coefficient (ADC) that provides information related to tumor cellularity and the integrity of the cell membranes. The goal of this study was to evaluate whether ADC measurements could provide information on the prognostic factors of breast cancer. A total of 71 women with invasive breast cancer, treated consecutively, who underwent preoperative breast MRIs with DWI at 3.0 Tesla and subsequent surgery, were prospectively included in this study. Each DWI was acquired with b values of 0 and 1000 s/mm 2 . The mean ADC values of the lesions were measured, including the entire lesion on the three largest sections. We performed histopathological analyses for the tumor size, lymph node status, histological grade, hormone receptors, human epidermal growth factor receptor 2 (HER2), Ki-67, p53, and molecular subtypes. The associations with the ADC values and prognostic factors of breast cancer were evaluated using the independent-samples t test and the one-way analysis of variance (ANOVA). A low ADC value was associated with lymph node metastasis (P < 0.01) and with high Ki-67 protein levels (P = 0.03). There were no significant differences in the ADC values among the histological grade (P = 0.48), molecular subtype (P = 0.51), tumor size (P = 0.46), and p53 protein level (P = 0.62). The pre-operative use of the 3.0 Tesla DWI could provide information about the lymph node status and tumor proliferation for breast cancer patients, and could help determine the optimal treatment plan
International Nuclear Information System (INIS)
Petzoldt, G.
2007-01-01
In the four beam times we performed at the FRM-II, we were able to show that the spectrometer works in principle and that a determination of a with it is possible. A set of routines has been written for decoding and analyzing the raw data. The routines are written in C using the ROOT libraries and can be easily adapted or expanded. We have found a reliable way to extract the proton count rates from the data by building pulseheight spectra for each measurement, subtracting background measurements from those and fitting the resulting peak with a Gaussian. The background of the measurements was studied in detail. The background caused by electrons from neutron decay is very well understood and conforms quantitatively to our expectation. Due to the spatial resolution of our detector and the time resolution provided by our DAQ electronics, we were able to study correlated electron-proton pairs from one neutron decay event. They form a clearly visible peak in a time- and channel-distance spectrum, which can be shifted in the channel-dimension by varying the voltages applied to the lower and upper E x B electrodes. Performing a pulseheight analysis for both involved particles allowed us to obtain a fairly clean energy spectrum of the background caused by electrons from neutron decay in our detector. Using these correlations for data analysis may be of interest for future neutron decay experiments which use segmented detectors. (orig.)
Energy Technology Data Exchange (ETDEWEB)
Petzoldt, G.
2007-08-29
In the four beam times we performed at the FRM-II, we were able to show that the spectrometer works in principle and that a determination of a with it is possible. A set of routines has been written for decoding and analyzing the raw data. The routines are written in C using the ROOT libraries and can be easily adapted or expanded. We have found a reliable way to extract the proton count rates from the data by building pulseheight spectra for each measurement, subtracting background measurements from those and fitting the resulting peak with a Gaussian. The background of the measurements was studied in detail. The background caused by electrons from neutron decay is very well understood and conforms quantitatively to our expectation. Due to the spatial resolution of our detector and the time resolution provided by our DAQ electronics, we were able to study correlated electron-proton pairs from one neutron decay event. They form a clearly visible peak in a time- and channel-distance spectrum, which can be shifted in the channel-dimension by varying the voltages applied to the lower and upper E x B electrodes. Performing a pulseheight analysis for both involved particles allowed us to obtain a fairly clean energy spectrum of the background caused by electrons from neutron decay in our detector. Using these correlations for data analysis may be of interest for future neutron decay experiments which use segmented detectors. (orig.)
Sauter, Alexander W; Stieltjes, Bram; Weikert, Thomas; Gatidis, Sergios; Wiese, Mark; Klarhöfer, Markus; Wild, Damian; Lardinois, Didier; Bremerich, Jens; Sommer, Gregor
2017-01-01
The minimum apparent diffusion coefficient (ADC min ) derived from diffusion-weighted MRI (DW-MRI) and the maximum standardized uptake value (SUV max ) of FDG-PET are markers of aggressiveness in lung cancer. The numeric correlation of the two parameters has been extensively studied, but their spatial interplay is not well understood. After FDG-PET and DW-MRI coregistration, values and location of ADC min - and SUV max -voxels were analyzed. The upper limit of the 95% confidence interval for registration accuracy of sequential PET/MRI was 12 mm, and the mean distance ( D ) between ADC min - and SUV max -voxels was 14.0 mm (average of two readers). Spatial mismatch ( D > 12 mm) between ADC min and SUV max was found in 9/25 patients. A considerable number of mismatch cases (65%) was also seen in a control group that underwent simultaneous PET/MRI. In the entire patient cohort, no statistically significant correlation between SUV max and ADC min was seen, while a moderate negative linear relationship ( r = -0.5) between SUV max and ADC min was observed in tumors with a spatial match ( D ≤ 12 mm). In conclusion, spatial mismatch between ADC min and SUV max is found in a considerable percentage of patients. The spatial connection of the two parameters SUV max and ADC min has a crucial influence on their numeric correlation.
International Nuclear Information System (INIS)
Regier, M.; Derlin, T.; Schwarz, D.; Laqmani, A.; Henes, F.O.; Groth, M.; Buhk, J.-H.; Kooijman, H.; Adam, G.
2012-01-01
Introduction: To investigate the potential correlation of the apparent diffusion coefficient assessed by diffusion-weighted MRI (DWI) and glucose metabolism determined by the standardized uptake value (SUV) at 18F-FDG PET/CT in non-small cell lung cancer (NSCLC). Materials and methods: 18F-FDG PET/CT and DWI (TR/TE, 2000/66 ms; b-values, 0 and 500 s/mm 2 ) were performed in 41 consecutive patients with histologically verified NSCLC. Analysing the PET-CT data calculation of the mean (SUV mean ) and maximum (SUV max ) SUV was performed. By placing a region-of-interest (ROI) encovering the entire tumor mean (ADC mean ) and minimum ADC (ADC min ) were determined by two independent radiologists. Results of 18F-FDG PET-CT and DWI were compared on a per-patient basis. For statistical analysis Pearson's correlation coefficient, Bland–Altman and regression analysis were assessed. Results: Data analysis revealed a significant inverse correlation of the ADC min and SUV max (r = −0.46; p = 0.032). Testing the correlation of the ADC min and SUV max for each histological subtype separately revealed that the inverse correlation was good for both adenocarcinomas (r = −0.47; p = 0.03) and squamouscell carcinomas (r = −0.71; p = 0.002), respectively. No significant correlation was found for the comparison of ADC min and SUV mean (r = −0.29; p = 0.27), ADC mean vs. SUV mean (r = −0.28; p = 0.31) or ADC mean vs. SUV max (r = −0.33; p = 0.23). The κ-value of 0.88 indicated a good agreement between both observers. Conclusion: This preliminary study is the first to verify the relation between the SUV and the ADC in NSCLC. The significant inverse correlation of these two quantitative imaging approaches points out the association of metabolic activity and tumor cellularity. Therefore, DWI with ADC measurement might represent a new prognostic marker in NSCLC
International Nuclear Information System (INIS)
Mujahid, M.Y.; Asif, M.; Ahmad, I.; Kisana, N.A.; Ahmad, Z.; Asim, M.
2005-01-01
Twenty bread-wheat elite lines of diverse origin, developed by various research institutes in the country, were tested and evaluated at National Agricultural Research Centre (NARC) under optimum irrigated conditions. Significant variation was observed for all the traits studied viz: days to heading, days to maturity, kernel weight, test weight and grain yield. Genotypic and phenotypic correlations were computed and the direct and indirect contributions of each trait towards grain-yield were determined. Grain-yield showed significant association with test weight and kernel weight. Direct positive effects of kernel weight and test weight towards grain-yield suggest the effectiveness of these traits to select and identify the desirable wheat- genotypes for a target environment. (author)
Guo, Yuan; Kong, Qing-Cong; Zhu, Ye-Qing; Liu, Zhen-Zhen; Peng, Ling-Rong; Tang, Wen-Jie; Yang, Rui-Meng; Xie, Jia-Jun; Liu, Chun-Ling
2018-02-01
To evaluate the utility of the whole-lesion histogram apparent diffusion coefficient (ADC) for characterizing the heterogeneity of mucinous breast carcinoma (MBC) and to determine which ADC metrics may help to best differentiate subtypes of MBC. This retrospective study involved 52 MBC patients, including 37 pure MBC (PMBC) and 15 mixed MBC (MMBC). The PMBC patients were subtyped into PMBC-A (20 cases) and PMBC-B (17 cases) groups. All patients underwent preoperative diffusion-weighted imaging (DWI) at 1.5T and the whole-lesion ADC assessments were generated. Histogram-derived ADC parameters were compared between PMBC vs. MMBC and PMBC-A vs. PMBC-B, and receiver operating characteristic (ROC) curve analysis was used to determine optimal histogram parameters for differentiating these groups. The PMBC group exhibited significantly higher ADC values for the mean (P = 0.004), 25 th (P = 0.004), 50 th (P = 0.004), 75 th (P = 0.006), and 90 th percentiles (P = 0.013) and skewness (P = 0.021) than did the MMBC group. The 25 th percentile of ADC values achieved the highest area under the curve (AUC) (0.792), with a cutoff value of 1.345 × 10 -3 mm 2 /s, in distinguishing PMBC and MMBC. The PMBC-A group showed significantly higher ADC values for the mean (P = 0.049), 25 th (P = 0.015), and 50 th (P = 0.026) percentiles and skewness (P = 0.004) than did the PMBC-B group. The 25 th percentile of the ADC cutoff value (1.476 × 10 -3 mm 2 /s) demonstrated the best AUC (0.837) among the ADC values for distinguishing PMBC-A and PMBC-B. Whole-lesion ADC histogram analysis enables comprehensive evaluation of an MBC in its entirety and differentiating subtypes of MBC. Thus, it may be a helpful and supportive tool for conventional MRI. 4 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2018;47:391-400. © 2017 International Society for Magnetic Resonance in Medicine.
Henderson, Clark M; Lozada-Contreras, Michelle; Jiranek, Vladimir; Longo, Marjorie L; Block, David E
2013-01-01
Optimizing ethanol yield during fermentation is important for efficient production of fuel alcohol, as well as wine and other alcoholic beverages. However, increasing ethanol concentrations during fermentation can create problems that result in arrested or sluggish sugar-to-ethanol conversion. The fundamental cellular basis for these problem fermentations, however, is not well understood. Small-scale fermentations were performed in a synthetic grape must using 22 industrial Saccharomyces cerevisiae strains (primarily wine strains) with various degrees of ethanol tolerance to assess the correlation between lipid composition and fermentation kinetic parameters. Lipids were extracted at several fermentation time points representing different growth phases of the yeast to quantitatively analyze phospholipids and ergosterol utilizing atmospheric pressure ionization-mass spectrometry methods. Lipid profiling of individual fermentations indicated that yeast lipid class profiles do not shift dramatically in composition over the course of fermentation. Multivariate statistical analysis of the data was performed using partial least-squares linear regression modeling to correlate lipid composition data with fermentation kinetic data. The results indicate a strong correlation (R(2) = 0.91) between the overall lipid composition and the final ethanol concentration (wt/wt), an indicator of strain ethanol tolerance. One potential component of ethanol tolerance, the maximum yeast cell concentration, was also found to be a strong function of lipid composition (R(2) = 0.97). Specifically, strains unable to complete fermentation were associated with high phosphatidylinositol levels early in fermentation. Yeast strains that achieved the highest cell densities and ethanol concentrations were positively correlated with phosphatidylcholine species similar to those known to decrease the perturbing effects of ethanol in model membrane systems.
Sun, Yangbo; Chen, Long; Huang, Bisheng; Chen, Keli
2017-07-01
As a mineral, the traditional Chinese medicine calamine has a similar shape to many other minerals. Investigations of commercially available calamine samples have shown that there are many fake and inferior calamine goods sold on the market. The conventional identification method for calamine is complicated, therefore as a result of the large scale of calamine samples, a rapid identification method is needed. To establish a qualitative model using near-infrared (NIR) spectroscopy for rapid identification of various calamine samples, large quantities of calamine samples including crude products, counterfeits and processed products were collected and correctly identified using the physicochemical and powder X-ray diffraction method. The NIR spectroscopy method was used to analyze these samples by combining the multi-reference correlation coefficient (MRCC) method and the error back propagation artificial neural network algorithm (BP-ANN), so as to realize the qualitative identification of calamine samples. The accuracy rate of the model based on NIR and MRCC methods was 85%; in addition, the model, which took comprehensive multiple factors into consideration, can be used to identify crude calamine products, its counterfeits and processed products. Furthermore, by in-putting the correlation coefficients of multiple references as the spectral feature data of samples into BP-ANN, a BP-ANN model of qualitative identification was established, of which the accuracy rate was increased to 95%. The MRCC method can be used as a NIR-based method in the process of BP-ANN modeling.
Hettiarachchi, Ranga; Yokoyama, Mitsuo; Uehara, Hideyuki
This paper presents a novel interference cancellation (IC) scheme for both synchronous and asynchronous direct-sequence code-division multiple-access (DS-CDMA) wireless channels. In the DS-CDMA system, the multiple access interference (MAI) and the near-far problem (NFP) are the two factors which reduce the capacity of the system. In this paper, we propose a new algorithm that is able to detect all interference signals as an individual MAI signal by maximum correlation detection. It is based on the discovery of all the unknowing spreading codes of the interference signals. Then, all possible MAI patterns so called replicas are generated as a summation of interference signals. And the true MAI pattern is found by taking correlation between the received signal and the replicas. Moreover, the receiver executes MAI cancellation in a successive manner, removing all interference signals by single-stage. Numerical results will show that the proposed IC strategy, which alleviates the detrimental effect of the MAI and the near-far problem, can significantly improve the system performance. Especially, we can obtain almost the same receiving characteristics as in the absense of interference for asynchrnous system when received powers are equal. Also, the same performances can be seen under any received power state for synchronous system.
Directory of Open Access Journals (Sweden)
Naveen Kumar
2018-01-01
Full Text Available Background. Difference in scar formation at different sites, in different directions at the same site, but with changes in the elasticity of skin with age, sex, and race or in some pathological conditions, is well known to clinicians. The inappropriate collagen syntheses and delayed or lack of epithelialization are known to induce scar formation with negligible elasticity at the site of damage. Changes in the elasticity of scars may be due to an unequal distribution of dermal collagen (C and elastic (E fibers. Materials and Methods. Spearman correlation coefficients (r of collagen and elastic fibers in horizontal (H and in vertical (V directions (variables CV, CH, EV, and EH were measured from the respective quantitative fraction data in 320 skin samples from 32 human cadavers collected at five selected sites over extremities. Results. Spearman’s correlation analysis revealed the statistically significant (p<0.01 strong positive correlation between CH and CV in all the areas, that is, shoulder joint area (r=0.66, wrist (r=0.75, forearm (r=0.75, and thigh (r=0.80, except at the ankle (r=0.26, p=0.14 region. Similarly, positive correlation between EH and EV has been observed at the forearm (r=0.65, moderate and thigh (r=0.42, low regions. However, a significant moderate negative correlation was observed between CV and EV at the forearm (r=-0.51 and between CH and EH at the thigh region (r=-0.65. Conclusion. Significant differences of correlations of collagen and elastic fibers in different directions from different areas of extremities were noted. This may be one of the possible anatomical reasons of scar behavior in different areas and different directions of the same area.
Kumar, Naveen; Kumar, Pramod; Badagabettu, Satheesha Nayak; Lewis, Melissa Glenda; Adiga, Murali; Padur, Ashwini Aithal
2018-01-01
Difference in scar formation at different sites, in different directions at the same site, but with changes in the elasticity of skin with age, sex, and race or in some pathological conditions, is well known to clinicians. The inappropriate collagen syntheses and delayed or lack of epithelialization are known to induce scar formation with negligible elasticity at the site of damage. Changes in the elasticity of scars may be due to an unequal distribution of dermal collagen (C) and elastic (E) fibers. Spearman correlation coefficients ( r ) of collagen and elastic fibers in horizontal (H) and in vertical (V) directions (variables CV, CH, EV, and EH) were measured from the respective quantitative fraction data in 320 skin samples from 32 human cadavers collected at five selected sites over extremities. Spearman's correlation analysis revealed the statistically significant ( p < 0.01) strong positive correlation between C H and C V in all the areas, that is, shoulder joint area ( r = 0.66), wrist ( r = 0.75), forearm ( r = 0.75), and thigh ( r = 0.80), except at the ankle ( r = 0.26, p = 0.14) region. Similarly, positive correlation between E H and E V has been observed at the forearm ( r = 0.65, moderate) and thigh ( r = 0.42, low) regions. However, a significant moderate negative correlation was observed between C V and E V at the forearm ( r = -0.51) and between C H and E H at the thigh region ( r = -0.65). Significant differences of correlations of collagen and elastic fibers in different directions from different areas of extremities were noted. This may be one of the possible anatomical reasons of scar behavior in different areas and different directions of the same area.
Climer, Sharlee; Yang, Wei; de las Fuentes, Lisa; Dávila-Román, Victor G; Gu, C Charles
2014-11-01
Complex diseases are often associated with sets of multiple interacting genetic factors and possibly with unique sets of the genetic factors in different groups of individuals (genetic heterogeneity). We introduce a novel concept of custom correlation coefficient (CCC) between single nucleotide polymorphisms (SNPs) that address genetic heterogeneity by measuring subset correlations autonomously. It is used to develop a 3-step process to identify candidate multi-SNP patterns: (1) pairwise (SNP-SNP) correlations are computed using CCC; (2) clusters of so-correlated SNPs identified; and (3) frequencies of these clusters in disease cases and controls compared to identify disease-associated multi-SNP patterns. This method identified 42 candidate multi-SNP associations with hypertensive heart disease (HHD), among which one cluster of 22 SNPs (six genes) included 13 in SLC8A1 (aka NCX1, an essential component of cardiac excitation-contraction coupling) and another of 32 SNPs had 29 from a different segment of SLC8A1. While allele frequencies show little difference between cases and controls, the cluster of 22 associated alleles were found in 20% of controls but no cases and the other in 3% of controls but 20% of cases. These suggest that both protective and risk effects on HHD could be exerted by combinations of variants in different regions of SLC8A1, modified by variants from other genes. The results demonstrate that this new correlation metric identifies disease-associated multi-SNP patterns overlooked by commonly used correlation measures. Furthermore, computation time using CCC is a small fraction of that required by other methods, thereby enabling the analyses of large GWAS datasets. © 2014 WILEY PERIODICALS, INC.
Energy Technology Data Exchange (ETDEWEB)
Fukuchi, K.; Miyoshi, K. [Ube National College of Technology, Yamaguchi (Japan)
1996-03-10
The infinite dilution activity coefficients of alcohols (methanol, ethanol, 1-propanol, 2-propano, 1-butanol, and 2-butanol) in heavy paraffinic hydrocarbons (hexadecane and tetradecane) were measured in the region 20-80{degree}C by a gas stripping method. The ASOG model was applied to calculate the infinite dilution activity coefficients. The infinite dilution activity coefficients can be correlated by adjusting the group interaction parameters between hydroxy and methyl groups. 8 refs., 3 figs., 4 tabs.
Mooney, Walter D.; Ritsema, Jeroen; Hwang, Yong Keun
2012-01-01
A joint analysis of global seismicity and seismic tomography indicates that the seismic potential of continental intraplate regions is correlated with the seismic properties of the lithosphere. Archean and Early Proterozoic cratons with cold, stable continental lithospheric roots have fewer crustal earthquakes and a lower maximum earthquake catalog moment magnitude (Mcmax). The geographic distribution of thick lithospheric roots is inferred from the global seismic model S40RTS that displays shear-velocity perturbations (δVS) relative to the Preliminary Reference Earth Model (PREM). We compare δVS at a depth of 175 km with the locations and moment magnitudes (Mw) of intraplate earthquakes in the crust (Schulte and Mooney, 2005). Many intraplate earthquakes concentrate around the pronounced lateral gradients in lithospheric thickness that surround the cratons and few earthquakes occur within cratonic interiors. Globally, 27% of stable continental lithosphere is underlain by δVS≥3.0%, yet only 6.5% of crustal earthquakes with Mw>4.5 occur above these regions with thick lithosphere. No earthquakes in our catalog with Mw>6 have occurred above mantle lithosphere with δVS>3.5%, although such lithosphere comprises 19% of stable continental regions. Thus, for cratonic interiors with seismically determined thick lithosphere (1) there is a significant decrease in the number of crustal earthquakes, and (2) the maximum moment magnitude found in the earthquake catalog is Mcmax=6.0. We attribute these observations to higher lithospheric strength beneath cratonic interiors due to lower temperatures and dehydration in both the lower crust and the highly depleted lithospheric root.
Mooney, Walter D.; Ritsema, Jeroen; Hwang, Yong Keun
2012-12-01
A joint analysis of global seismicity and seismic tomography indicates that the seismic potential of continental intraplate regions is correlated with the seismic properties of the lithosphere. Archean and Early Proterozoic cratons with cold, stable continental lithospheric roots have fewer crustal earthquakes and a lower maximum earthquake catalog moment magnitude (Mcmax). The geographic distribution of thick lithospheric roots is inferred from the global seismic model S40RTS that displays shear-velocity perturbations (δVS) relative to the Preliminary Reference Earth Model (PREM). We compare δVS at a depth of 175 km with the locations and moment magnitudes (Mw) of intraplate earthquakes in the crust (Schulte and Mooney, 2005). Many intraplate earthquakes concentrate around the pronounced lateral gradients in lithospheric thickness that surround the cratons and few earthquakes occur within cratonic interiors. Globally, 27% of stable continental lithosphere is underlain by δVS≥3.0%, yet only 6.5% of crustal earthquakes with Mw>4.5 occur above these regions with thick lithosphere. No earthquakes in our catalog with Mw>6 have occurred above mantle lithosphere with δVS>3.5%, although such lithosphere comprises 19% of stable continental regions. Thus, for cratonic interiors with seismically determined thick lithosphere (1) there is a significant decrease in the number of crustal earthquakes, and (2) the maximum moment magnitude found in the earthquake catalog is Mcmax=6.0. We attribute these observations to higher lithospheric strength beneath cratonic interiors due to lower temperatures and dehydration in both the lower crust and the highly depleted lithospheric root.
International Nuclear Information System (INIS)
Shamim, Jubair A.; Bhowmik, Palash K.; Xiangyi, Chen; Suh, Kune Y.
2016-01-01
Highlights: • Thermo-hydrodynamic properties of water–Al_2O_3 nanofluid at PWR condition is analyzed. • Details of CFD simulation and validation procedure is outlined. • Augmented heat transfer capacity of nanofluid is governed by larger pumping power. • A new correlation for nanofluid Nusselt number in subchannel geometry is proposed. - Abstract: The computational fluid dynamic (CFD) simulation is performed to determine on the thermo- and hydrodynamic performance of the water–alumina (Al_2O_3) nanofluid in a square array subchannel featuring pitch-to-diameter ratios of 1.25 and 1.35. Two fundamental aspects of thermal hydraulics, viz. heat transfer and pressure drop, are assessed under typical pressurized water reactor (PWR) conditions at various flow rates (3 × 10"5 ⩽ Re ⩽ 6 × 10"5) using pure water and differing concentrations of water–alumina nanofluid (0.5–3.0 vol.%) as coolant. Numerical results are compared against predictions made by conventional single-phase convective heat transfer and pressure loss correlations for fully developed turbulent flow. It is observed that addition of tiny nanoparticles in PWR coolant can give rise to the convective heat transfer coefficient at the expense of larger pressure drop. Nevertheless, a modified correlation as a function of nanoparticle volume fraction is proposed to estimate nanofluid Nusselt number more precisely in square array subchannel.
Energy Technology Data Exchange (ETDEWEB)
Shamim, Jubair A. [Department of Nuclear Engineering, Seoul National University, Seoul 08826 (Korea, Republic of); Department of Mechanical Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656 (Japan); Bhowmik, Palash K. [Department of Nuclear Engineering, Seoul National University, Seoul 08826 (Korea, Republic of); Department of Nuclear Engineering, Missouri University of Science and Technology, 1201 N. State St., Rolla, MO 65409 (United States); Xiangyi, Chen [Department of Nuclear Engineering, Seoul National University, Seoul 08826 (Korea, Republic of); Suh, Kune Y., E-mail: kysuh@snu.ac.kr [Department of Nuclear Engineering, Seoul National University, Seoul 08826 (Korea, Republic of)
2016-11-15
Highlights: • Thermo-hydrodynamic properties of water–Al{sub 2}O{sub 3} nanofluid at PWR condition is analyzed. • Details of CFD simulation and validation procedure is outlined. • Augmented heat transfer capacity of nanofluid is governed by larger pumping power. • A new correlation for nanofluid Nusselt number in subchannel geometry is proposed. - Abstract: The computational fluid dynamic (CFD) simulation is performed to determine on the thermo- and hydrodynamic performance of the water–alumina (Al{sub 2}O{sub 3}) nanofluid in a square array subchannel featuring pitch-to-diameter ratios of 1.25 and 1.35. Two fundamental aspects of thermal hydraulics, viz. heat transfer and pressure drop, are assessed under typical pressurized water reactor (PWR) conditions at various flow rates (3 × 10{sup 5} ⩽ Re ⩽ 6 × 10{sup 5}) using pure water and differing concentrations of water–alumina nanofluid (0.5–3.0 vol.%) as coolant. Numerical results are compared against predictions made by conventional single-phase convective heat transfer and pressure loss correlations for fully developed turbulent flow. It is observed that addition of tiny nanoparticles in PWR coolant can give rise to the convective heat transfer coefficient at the expense of larger pressure drop. Nevertheless, a modified correlation as a function of nanoparticle volume fraction is proposed to estimate nanofluid Nusselt number more precisely in square array subchannel.
Goi, Takanori; Nakazawa, Toshiyuki; Hirono, Yasuo; Yamaguchi, Akio
2015-10-06
The angiogenic proteins vascular endothelial growth factor (VEGF) and prokineticin1 (PROK1) proteins are considered important in colorectal cancer, the relationship between their simultaneous expression and prognosis was investigated in the present study. VEGF and PROK1 expression in 620 primary human colorectal cancer lesions was confirmed via immunohistochemical staining with anti-VEGF and anti-PROK1 antibodies, and the correlation between the expression of these 2 proteins and recurrence/prognosis were investigated. VEGF protein was expressed in 329 (53.1%) and PROK1 protein was expressed in 223 (36.0%). PROK1 and VEGF were simultaneously expressed in 116 (18.7%) of the 620 cases. The correlation coefficient between VEGF expression and PROK1 expression was r = 0.11, and therefore correlation was not observed. Clinical pathology revealed that substantially lymphnode matastasis, hematogenous metastasis, or TMN advanced-stage IV was significantly more prevalent in cases that expressed both VEGF and PROK1 than in the cases negative for both proteins or those positive for only 1 of the proteins. Also the cases positive for both proteins exhibited the worst recurrence and prognosis. In the Cox proportional hazards model, VEGF and PROK1 expression was an independent prognostic factor. The prognosis was poorer in colorectal cancers that expressed both PROK1 and VEGF relative to the cases that expressed only 1 protein, and the expression of both proteins was found to be an independent prognostic factor.
Robust Maximum Association Estimators
A. Alfons (Andreas); C. Croux (Christophe); P. Filzmoser (Peter)
2017-01-01
textabstractThe maximum association between two multivariate variables X and Y is defined as the maximal value that a bivariate association measure between one-dimensional projections αX and αY can attain. Taking the Pearson correlation as projection index results in the first canonical correlation
International Nuclear Information System (INIS)
Steinberg, R.I.; Liaud, P.; Vignon, B.; Hughes, V.W.
1976-01-01
A detailed description of an experimental test of time-reversal invariance in the β decay of the polarized free neutron is presented. The experiment consists of a measurement of the triple-correlation coefficient D between the neutron polarization vector and the electron and antineutrino momentum vectors. A nonzero value for this coefficient would imply T violation, since final-state interactions and other corrections may be neglected at the present level of precision. The experiment was performed using a cold-neutron beam at the High Flux Reactor of the Institut Laue-Langevin, Grenoble. A polarizing neutron guide tube yielded a beam intensity of 10 9 neutrons/sec with a polarization of 70%. Our result, based upon observation of approximately 6 x 10 6 decays, is D = (-1.1 +- 1.7) x 10 -3 , consistent with time-reversal invariance in the ΔS = 0 weak interaction. In terms of the relative phase angle between axial-vector and vector coupling constants, the result may be expressed as phi = 180.14 +- 0.22 0
Cortesi, Nicola; Peña-Angulo, Dhais; Simolo, Claudia; Stepanek, Peter; Brunetti, Michele; Gonzalez-Hidalgo, José Carlos
2014-05-01
One of the key point in the develop of the MOTEDAS dataset (see Poster 1 MOTEDAS) in the framework of the HIDROCAES Project (Impactos Hidrológicos del Calentamiento Global en España, Spanish Ministery of Research CGL2011-27574-C02-01) is the reference series for which no generalized metadata exist. In this poster we present an analysis of spatial variability of monthly minimum and maximum temperatures in the conterminous land of Spain (Iberian Peninsula, IP), by using the Correlation Decay Distance function (CDD), with the aim of evaluating, at sub-regional level, the optimal threshold distance between neighbouring stations for producing the set of reference series used in the quality control (see MOTEDAS Poster 1) and the reconstruction (see MOREDAS Poster 3). The CDD analysis for Tmax and Tmin was performed calculating a correlation matrix at monthly scale between 1981-2010 among monthly mean values of maximum (Tmax) and minimum (Tmin) temperature series (with at least 90% of data), free of anomalous data and homogenized (see MOTEDAS Poster 1), obtained from AEMEt archives (National Spanish Meteorological Agency). Monthly anomalies (difference between data and mean 1981-2010) were used to prevent the dominant effect of annual cycle in the CDD annual estimation. For each station, and time scale, the common variance r2 (using the square of Pearson's correlation coefficient) was calculated between all neighbouring temperature series and the relation between r2 and distance was modelled according to the following equation (1): Log (r2ij) = b*°dij (1) being Log(rij2) the common variance between target (i) and neighbouring series (j), dij the distance between them and b the slope of the ordinary least-squares linear regression model applied taking into account only the surrounding stations within a starting radius of 50 km and with a minimum of 5 stations required. Finally, monthly, seasonal and annual CDD values were interpolated using the Ordinary Kriging with a
Zens, Joerg; Krauß, Lydia; Römer, Wolfgang; Klasen, Nicole; Pirson, Stéphane; Schulte, Philipp; Zeeden, Christian; Sirocko, Frank; Lehmkuhl, Frank
2016-04-01
The D1 project of the CRC 806 "Our way to Europe" focusses on Central Europe as a destination of modern human dispersal out of Africa. The paleo-environmental conditions along the migration areas are reconstructed by loess-paleosol sequences and lacustrine sediments. Stratigraphy and luminescence dating provide the chronological framework for the correlation of grain size and geochemical data to large-scale climate proxies like isotope ratios and dust content of Greenland ice cores. The reliability of correlations is improved by the development of precise age models of specific marker beds. In this study, we focus on the (terrestrial) Last Glacial Maximum of the Weichselian Upper Pleniglacial which is supposed to be dominated by high wind speeds and an increasing aridity. Especially in the Lower Rhine Embayment (LRE), this period is linked to an extensive erosion event. The disconformity is followed by an intensive cryosol formation. In order to support the stratigraphical observations from the field, luminescence dating and grain size analysis were applied on three loess-paleosol sequences along the northern European loess belt to develop a more reliable chronology and to reconstruct paleo-environmental dynamics. The loess sections were compared to newest results from heavy mineral and grain size analysis from the Dehner Maar core (Eifel Mountains) and correlated to NGRIP records. Volcanic minerals can be found in the Dehner Maar core from a visible tephra layer at 27.8 ka up to ~25 ka. They can be correlated to the Eltville Tephra found in loess section. New quartz luminescence ages from Romont (Belgium) surrounding the tephra dated the deposition between 25.0 + 2.3 ka and 25.8 + 2.4 ka. In the following, heavy minerals show an increasing importance of strong easterly winds during the second Greenland dust peak (~24 ka b2k) correlating with an extensive erosion event in the LRE. Luminescence dating on quartz bracketing the following soil formation yielded ages of
Directory of Open Access Journals (Sweden)
Benedikt Michael Schaarschmidt
Full Text Available To compare the apparent diffusion coefficient (ADC in lymph node metastases of non-small cell lung cancer (NSCLC patients with standardized uptake values (SUV derived from combined 18F-fluoro-deoxy-glucose-positron emission tomography/magnetic resonance imaging (18F-FDG PET/MRI.38 patients with histopathologically proven NSCLC (mean age 60.1 ± 9.5 y received whole-body PET/CT (Siemens mCT™ 60 min after injection of a mean dose of 280 ± 50 MBq 18F-FDG and subsequent PET/MRI (mean time after tracer injection: 139 ± 26 min, Siemens Biograph mMR. During PET acquisition, simultaneous diffusion-weighted imaging (DWI, b values: 0, 500, 1000 s/mm² was performed. A maximum of 10 lymph nodes per patient suspicious for malignancy were analyzed. Regions of interest (ROI were drawn covering the entire lymph node on the attenuation-corrected PET-image and the monoexponential ADC-map. According to histopathology or radiological follow-up, lymph nodes were classified as benign or malignant. Pearson's correlation coefficients were calculated for all lymph node metastases correlating SUVmax and SUVmean with ADCmean.A total of 146 suspicious lymph nodes were found in 25 patients. One hundred lymph nodes were eligible for final analysis. Ninety-one lymph nodes were classified as malignant and 9 as benign according to the reference standard. In malignant lesions, mean SUVmax was 9.1 ± 3.8 and mean SUVmean was 6.0 ± 2.5 while mean ADCmean was 877.0 ± 128.6 x10(-5 mm²/s in PET/MRI. For all malignant lymph nodes, a weak, inverse correlation between SUVmax and ADCmean as well as SUVmean and ADCmean (r = -0.30, p<0.05 and r = -0.36, p<0.05 existed.The present data show a weak inverse correlation between increased glucose-metabolism and cellularity in lymph node metastases of NSCLC patients. 18F-FDG-PET and DWI thus may offer complementary information for the evaluation of treatment response in lymph node metastases of NSCLC.
International Nuclear Information System (INIS)
Tian, Lixin; Ding, Zhenqi; Zhen, Zaili; Wang, Minggang
2016-01-01
The international crude oil market plays a crucial role in economies, and the studies of the correlation, risk and synchronization of the international crude oil market have important implications for the security and stability of the country, avoidance of business risk and people's daily lives. We investigate the information and characteristics of the international crude oil market (1999-2015) based on the random matrix theory (RMT). Firstly, we identify richer information in the largest eigenvalues deviating from RMT predictions for the international crude oil market; the international crude oil market can be roughly divided into ten different periods by the methods of eigenvectors and characteristic combination, and the implied market information of the correlation coefficient matrix is advanced. Secondly, we study the characteristics of the international crude oil market by the methods of system risk entropy, dynamic synchronous ratio, dynamic non-synchronous ratio and dynamic clustering algorithm. The results show that the international crude oil market is full of risk. The synchronization of the international crude oil market is very strong, and WTI and Brent occupy a very important position in the international crude oil market. (orig.)
Esteves, Freddy; Moutinho, Carla; Matos, Carla
2013-06-01
Absorption and consequent therapeutic action are key issues in the development of new drugs by the pharmaceutical industry. In this sense, different models can be used to simulate biological membranes to predict the absorption of a drug. This work compared the octanol/water and the liposome/water models. The parameters used to relate the two models were the distribution coefficients between liposomes and water and octanol and water and the fraction of drug orally absorbed. For this study, 66 drugs were collected from literature sources and divided into four groups according to charge and ionization degree: neutral; positively charged; negatively charged; and partially ionized/zwitterionic. The results show a satisfactory linear correlation between the octanol and liposome systems for the neutral (R²= 0.9324) and partially ionized compounds (R²= 0.9367), contrary to the positive (R²= 0.4684) and negatively charged compounds (R²= 0.1487). In the case of neutral drugs, results were similar in both models because of the high fraction orally absorbed. However, for the charged drugs (positively, negatively, and partially ionized/zwitterionic), the liposomal model has a more-appropriate correlation with absorption than the octanol model. These results show that the neutral compounds only interact with membranes through hydrophobic bonds, whereas charged drugs favor electrostatic interactions established with the liposomes. With this work, we concluded that liposomes may be a more-appropriate biomembrane model than octanol for charged compounds.
Energy Technology Data Exchange (ETDEWEB)
Tian, Lixin [Jiangsu University, Energy Development and Environmental Protection Strategy Research Center, Zhenjiang, Jiangsu (China); Nanjing Normal University, School of Mathematical Sciences, Nanjing, Jiangsu (China); Ding, Zhenqi; Zhen, Zaili [Jiangsu University, Energy Development and Environmental Protection Strategy Research Center, Zhenjiang, Jiangsu (China); Wang, Minggang [Nanjing Normal University, School of Mathematical Sciences, Nanjing, Jiangsu (China)
2016-08-15
The international crude oil market plays a crucial role in economies, and the studies of the correlation, risk and synchronization of the international crude oil market have important implications for the security and stability of the country, avoidance of business risk and people's daily lives. We investigate the information and characteristics of the international crude oil market (1999-2015) based on the random matrix theory (RMT). Firstly, we identify richer information in the largest eigenvalues deviating from RMT predictions for the international crude oil market; the international crude oil market can be roughly divided into ten different periods by the methods of eigenvectors and characteristic combination, and the implied market information of the correlation coefficient matrix is advanced. Secondly, we study the characteristics of the international crude oil market by the methods of system risk entropy, dynamic synchronous ratio, dynamic non-synchronous ratio and dynamic clustering algorithm. The results show that the international crude oil market is full of risk. The synchronization of the international crude oil market is very strong, and WTI and Brent occupy a very important position in the international crude oil market. (orig.)
Li, Hai Ming; Liu, Jia; Qiang, Jin Wei; Gu, Wei Yong; Zhang, Guo Fu; Ma, Feng Hua
2017-11-01
This study aimed to investigate the conventional magnetic resonance imaging (MRI) and diffusion-weighted imaging (DWI) features of endometrial stromal sarcoma (ESS) including a preliminary investigation of the correlation between the apparent diffusion coefficient (ADC) value and Ki-67 expression. The clinical and MRI data of 15 patients with ESS confirmed by surgery and pathology were analyzed retrospectively. The conventional MR morphological features, signal intensity on DWI, ADC value (n = 14), and clinicopathological marker Ki-67 (n = 13) were evaluated. Of 15 patients with ESS, 13 tumors were low-grade ESS (LGESS), and the remaining 2 were high-grade ESS (HGESS); 9 tumors were located in the myometrium, 5 were located in the endometrium and/or cervical canal, and 1 was located in extrauterine. Thirteen (87%) of 15 tumors showed a homo- or heterogeneous isointensity on T1-weighted imaging and a heterogeneous hyperintensity on T2-weighted imaging. The hypointense bands were observed in 11 tumors (73%) on T2-weighted imaging. The degenerations (cystic/necrosis/hemorrhage) were observed in 7 LGESS tumors and 2 HGESS tumors. The DWI hyperintensity was observed in 13 tumors (93%) and isointensity in remaining 1. The mean ADC value of the solid components in 14 ESSs was (1.05 ± 0.20) × 10mm/s. The contrast-enhanced MRI showed an obvious enhancement in 14 tumors (93%) (heterogeneous in 7 LGESSs and 2 HGESSs; homogeneous in 5 LGESSs). The ADC value was inversely correlated with the Ki-67 expression (r = -0.613, P = 0.026). Patients with ESS showed some characteristics on conventional MRI and DWI, and there was an inverse correlation between the ADC value and Ki-67 expression.
Zhan, Yuefu; Liang, Xianwen; Han, Xiangjun; Chen, Jianqiang; Zhang, Shufang; Tan, Shun; Li, Qun; Wang, Xiong; Liu, Fan
2017-02-28
To explore the correlation between the apparent diffusion coefficient (ADC) and mRNA expression of tissue inhibitor of metalloproteinase-1 (TIMP-1) in different stages of liver fibrosis in rats. Methods: A model of liver fibrosis in rats was established by intraperitoneal injection of high-fat diet combined with porcine serum. After drug administration for 4 weeks, 48 rats served as a model group and 12 rats served as a control group, then they underwent diffusion weighted imaging (DWI) scanning. The value of ADC was calculated at b value=800 s/mm2. The rats were sacrificed and carried out pathologic examination after DWI scanning immediately. The mRNA expression of TIMP-1 was detected by real time-polymerase chain reaction (RT-PCR). The rats of hepatic fibrosis were also divided into a S0 group (n=4), a S1 group (n=11), a S2 group (n=12), a S3 group (n=10), and a S4 group (n=9) according to their pathological stage. The value of ADC and the expression of TIMP-1 mRNA among the different stage groups of liver fibrosis were compared, and the correlation between ADC and the TIMP-1 mRNA were analyzed. Results: The ADC value and the TIMP-1 mRNA expression were significantly different between the control group and the liver fibrosis group (F=46.54 and 53.87, P0.05). For the comparison of TIMP-1 mRNA, there was no significant difference between the S1 group and the S2 group, the S3 group and the S4 group (both P>0.05). There were significant differences among the rest of the groups (all Pcorrelation analysis showed that there was a negative correlation between the ADC value and the TIMP-1 mRNA expression (r=-0.76, Pcorrelation between them.
Li, Gui Dian; Liang, Ying Yin; Xu, Ping; Ling, Jian; Chen, Ying Ming
2016-04-01
The purpose of this study is to investigate the correlation of apparent diffusion coefficient (ADC) and fractional anisotropy (FA) values with fatty infiltration in the thigh muscles of patients with Duchenne muscular dystrophy (DMD) using diffusion-tensor imaging (DTI). Twenty-one boys with DMD were recruited. The grade of fatty infiltration and the ADC and FA values of four thigh muscles (rectus femoris, semitendinosus, sartorius, and gracilis) were measured, and the FA and ADC values were compared with the grade of fatty infiltration. Twenty age-matched healthy boys were enrolled as the control group. The differences in the ADC and FA values of the thigh muscles between patients with DMD and the control group were compared. The patients with DMD showed lower FA values and higher ADC values in all measured muscles when compared with the control group. The FA and ADC values were correlated with the grade of fatty infiltration. For the rectus femoris muscle, r = -0.753 and p = 0.007 for FA, and r = 0.685 and p = 0.001 for ADC. For the semitendinosus muscle, r = -0.621 and p = 0.041 for FA, and r = 0.705 and p = 0.021 for ADC. For the sartorius muscle, r = -0.662 and p = 0.027 for FA, and r = 0.701 and p = 0.017 for ADC. For the gracilis muscle, r = -0.618 and p = 0.043 for FA, and r = 0.695 and p = 0.022 for ADC. Damage to the thigh muscles in patients with DMD can be detected by ADC and FA values using DTI. DTI can be used to assess the severity of the disease.
International Nuclear Information System (INIS)
Jones, E.C.; Christen, D.K.; Thompson, J.R.; Feenstra, R.; Zhu, S.; Lowndes, D.H.; Phillips, J.M.; Siegal, M.P.; Budai, J.D.
1993-01-01
Strong correlations between the Hall coefficient R H , the transition temperature T c , and the critical current density J c were established in a series of epitaxial YBa 2 Cu 3 O 7-δ thin films as a function of oxygen deficiency δ. Steady increases in R H with δ suggest that deoxygenation reduces the density of states which, according to BCS theory, should lead to corresponding decreases in T c . In contrast, two well-known plateaus occurring at 90 K and 60 K were observed in T c vs δ. Others have ascribed these plateaus to either electronic phenomena or phase separations. We find that in the 90-K plateau, the critical current density J c (δ,H=0) decreases with δ and extrapolates toward zero at the edge of the plateau, while the relative-field dependence of J c (δ,H) and the flux-creep pinning energies are independent of δ. These observations suggest that the phase-separation scenario occurs on the 90-K plateau. However, electronic origins cannot be ruled out at present due to difficulties in determining the equilibrium superconducting properties of oxygen-deficient YBa 2 Cu 3 O 7-δ films
Directory of Open Access Journals (Sweden)
Yongbin Liu
2017-01-01
Full Text Available Envelope spectrum analysis is a simple, effective, and classic method for bearing fault identification. However, in the wayside acoustic health monitoring system, owing to the high relative moving speed between the railway vehicle and the wayside mounted microphone, the recorded signal is embedded with Doppler effect, which brings in shift and expansion of the bearing fault characteristic frequency (FCF. What is more, the background noise is relatively heavy, which makes it difficult to identify the FCF. To solve the two problems, this study introduces solutions for the wayside acoustic fault diagnosis of train bearing based on Doppler effect reduction using the improved time-domain interpolation resampling (TIR method and diagnosis-relevant information enhancement using Weighted-Correlation-Coefficient-Guided Stochastic Resonance (WCCSR method. First, the traditional TIR method is improved by incorporating the original method with kinematic parameter estimation based on time-frequency analysis and curve fitting. Based on the estimated parameters, the Doppler effect is removed using the TIR easily. Second, WCCSR is employed to enhance the diagnosis-relevant period signal component in the obtained Doppler-free signal. Finally, paved with the above two procedures, the local fault is identified using envelope spectrum analysis. Simulated and experimental cases have verified the effectiveness of the proposed method.
Li, Lin; Zeng, Li; Lin, Zi-Jing; Cazzell, Mary; Liu, Hanli
2015-05-01
Test-retest reliability of neuroimaging measurements is an important concern in the investigation of cognitive functions in the human brain. To date, intraclass correlation coefficients (ICCs), originally used in interrater reliability studies in behavioral sciences, have become commonly used metrics in reliability studies on neuroimaging and functional near-infrared spectroscopy (fNIRS). However, as there are six popular forms of ICC, the adequateness of the comprehensive understanding of ICCs will affect how one may appropriately select, use, and interpret ICCs toward a reliability study. We first offer a brief review and tutorial on the statistical rationale of ICCs, including their underlying analysis of variance models and technical definitions, in the context of assessment on intertest reliability. Second, we provide general guidelines on the selection and interpretation of ICCs. Third, we illustrate the proposed approach by using an actual research study to assess interest reliability of fNIRS-based, volumetric diffuse optical tomography of brain activities stimulated by a risk decision-making protocol. Last, special issues that may arise in reliability assessment using ICCs are discussed and solutions are suggested.
Li, Lin; Zeng, Li; Lin, Zi-Jing; Cazzell, Mary; Liu, Hanli
2015-05-01
Test-retest reliability of neuroimaging measurements is an important concern in the investigation of cognitive functions in the human brain. To date, intraclass correlation coefficients (ICCs), originally used in inter-rater reliability studies in behavioral sciences, have become commonly used metrics in reliability studies on neuroimaging and functional near-infrared spectroscopy (fNIRS). However, as there are six popular forms of ICC, the adequateness of the comprehensive understanding of ICCs will affect how one may appropriately select, use, and interpret ICCs toward a reliability study. We first offer a brief review and tutorial on the statistical rationale of ICCs, including their underlying analysis of variance models and technical definitions, in the context of assessment on intertest reliability. Second, we provide general guidelines on the selection and interpretation of ICCs. Third, we illustrate the proposed approach by using an actual research study to assess intertest reliability of fNIRS-based, volumetric diffuse optical tomography of brain activities stimulated by a risk decision-making protocol. Last, special issues that may arise in reliability assessment using ICCs are discussed and solutions are suggested.
Rights, Jason D; Sterba, Sonya K
2016-11-01
Multilevel data structures are common in the social sciences. Often, such nested data are analysed with multilevel models (MLMs) in which heterogeneity between clusters is modelled by continuously distributed random intercepts and/or slopes. Alternatively, the non-parametric multilevel regression mixture model (NPMM) can accommodate the same nested data structures through discrete latent class variation. The purpose of this article is to delineate analytic relationships between NPMM and MLM parameters that are useful for understanding the indirect interpretation of the NPMM as a non-parametric approximation of the MLM, with relaxed distributional assumptions. We define how seven standard and non-standard MLM specifications can be indirectly approximated by particular NPMM specifications. We provide formulas showing how the NPMM can serve as an approximation of the MLM in terms of intraclass correlation, random coefficient means and (co)variances, heteroscedasticity of residuals at level 1, and heteroscedasticity of residuals at level 2. Further, we discuss how these relationships can be useful in practice. The specific relationships are illustrated with simulated graphical demonstrations, and direct and indirect interpretations of NPMM classes are contrasted. We provide an R function to aid in implementing and visualizing an indirect interpretation of NPMM classes. An empirical example is presented and future directions are discussed. © 2016 The British Psychological Society.
Energy Technology Data Exchange (ETDEWEB)
Tochigi, K.; Kurita, S.; Ohashi, M. [Yuki Gosei Kogyo Co. LTd., (Japan); Kojima, K. [Nihon University, Tokyo (Japan). Department of Industrial Chemistry
1997-09-01
Infinite dilution activity coefficients (353.15-393.15 K) of six solvents (benzene, toluene, p-xylene, cyclohexane, acetone and methylethylketone) and activity coefficient at finite concentrations (353.15 K, 373.15 K) of these solvents in poly (ethylene oxide) are measured using gas-chromatographic method. The experimental data are then correlated by a polymer-ASOG model. 18 refs., 2 figs., 3 tabs.
Yadav, Rupesh J.; Kore, Sandeep S.; Joshi, Prathamesh S.
2018-05-01
The experimental and numerical Nusselt number and friction factor investigation for turbulent flow through a non-circular duct with twisted-tape inserts have been presented. The non-circular ducts include square, hexagonal duct. The results of non-circular ducts are compared with circular duct. All the ducts have same equivalent diameter. The twist ratios used for the experiment are Y = 3.5, 4.5, 5.5 and 6.5. Experiments were carried out on square duct, hexagonal duct and circular duct. The Reynolds number lied between 10,000 and 1, 05,000. The present study is restricted to the flow of air at Pr = 0.7 only and within a narrow temperature range of 40 to 75 ΟC, within which the compressible nature of air can be neglected. The results reveal that, both Nusselt number and friction factor increases as the side of non-circular duct increases. Maximum Nusselt number and friction factor is obtained in case of circular duct with twisted tape. Further the correlations of Nu and f are given for different non circular duct with twisted tape insert for engineering applications for the turbulent regime. Since the thermal performance factor (η) is observed to be within the range of 0.8 to 1.13 for both circular and noncircular ducts, the overall benefit of using twisted tape in the flow field shall nevertheless be marginal.
Poussaint, Tina Young; Vajapeyam, Sridhar; Ricci, Kelsey I.; Panigrahy, Ashok; Kocak, Mehmet; Kun, Larry E.; Boyett, James M.; Pollack, Ian F.; Fouladi, Maryam
2016-01-01
Background Diffuse intrinsic pontine glioma (DIPG) is associated with poor survival regardless of therapy. We used volumetric apparent diffusion coefficient (ADC) histogram metrics to determine associations with progression-free survival (PFS) and overall survival (OS) at baseline and after radiation therapy (RT). Methods Baseline and post-RT quantitative ADC histograms were generated from fluid-attenuated inversion recovery (FLAIR) images and enhancement regions of interest. Metrics assessed included number of peaks (ie, unimodal or bimodal), mean and median ADC, standard deviation, mode, skewness, and kurtosis. Results Based on FLAIR images, the majority of tumors had unimodal peaks with significantly shorter average survival. Pre-RT FLAIR mean, mode, and median values were significantly associated with decreased risk of progression; higher pre-RT ADC values had longer PFS on average. Pre-RT FLAIR skewness and standard deviation were significantly associated with increased risk of progression; higher pre-RT FLAIR skewness and standard deviation had shorter PFS. Nonenhancing tumors at baseline showed higher ADC FLAIR mean values, lower kurtosis, and higher PFS. For enhancing tumors at baseline, bimodal enhancement histograms had much worse PFS and OS than unimodal cases and significantly lower mean peak values. Enhancement in tumors only after RT led to significantly shorter PFS and OS than in patients with baseline or no baseline enhancement. Conclusions ADC histogram metrics in DIPG demonstrate significant correlations between diffusion metrics and survival, with lower diffusion values (increased cellularity), increased skewness, and enhancement associated with shorter survival, requiring future investigations in large DIPG clinical trials. PMID:26487690
International Nuclear Information System (INIS)
Hatakenaka, Masamitsu; Nakamura, Katsumasa; Yabuuchi, Hidetake; Shioyama, Yoshiyuki; Matsuo, Yoshio; Ohnishi, Kayoko; Sunami, Shunya; Kamitani, Takeshi; Setoguchi, Taro; Yoshiura, Takashi; Nakashima, Torahiko; Nishikawa, Kei; Honda, Hiroshi
2011-01-01
Purpose: This study was performed to evaluate whether the apparent diffusion coefficient (ADC) of a primary lesion correlates with local failure in primary head-and-neck squamous cell carcinoma (HNSCC) treated with chemoradiotherapy or radiotherapy. Methods and Materials: We retrospectively studied 38 patients with primary HNSCC (12 oropharynx, 20 hypopharynx, 4 larynx, 2 oral cavity) treated with chemoradiotherapy or radiotherapy with radiation dose to gross tumor volume equal to or over 60 Gy and who underwent pretreatment magnetic resonance imaging, including diffusion-weighted imaging. Ten patients developed local failure during follow-up periods of 2.0 to 9.3 months, and the remaining 28 showed local control during follow-up periods of 10.5 to 31.7 months. The variables that could affect local failure (age, tumor volume, ADC, T stage, N stage, dose, treatment method, tumor location, and overall treatment time) were analyzed using logistic regression analyses for all 38 patients and for 17 patients with Stage T3 or T4 disease. Results: In univariate logistic analysis for all 38 cases, tumor volume, ADC, T stage, and treatment method showed significant (p < 0.05) associations with local failure. In multivariate analysis, ADC and T stage revealed significance (p < 0.01). In univariate logistic analysis for the 17 patients with Stage T3 or T4 disease, ADC and dose showed significant (p < 0.01) associations with local failure. In multivariate analysis, ADC alone showed significance (p < 0.05). Conclusions: The results suggest that pretreatment ADC, along with T stage, is a potential indicator of local failure in HNSCC treated with chemoradiotherapy or radiotherapy.
Hanson, A A; Moon, R D; Wright, R J; Hunt, T E; Hutchison, W D
2015-08-01
Western bean cutworm, Striacosta albicosta (Smith) (Lepidoptera: Noctuidae), is a native, univoltine pest of corn and dry beans in North America. The current degree-day model for predicting a specified percentage of yearly moth flight involves heat unit accumulation above 10°C after 1 May. However, because the moth's observed range has expanded into the northern and eastern United States, there is concern that suitable temperatures before May could allow for significant S. albicosta development. Daily blacklight moth catch and temperature data from four Nebraska locations were used to construct degree-day models using simple or sine-wave methods, starting dates between 1 January and 1 May, and lower (-5 to 15°C) and upper (20 to 43.3°C) developmental thresholds. Predicted dates of flight from these models were compared with observed flight dates using independent datasets to assess model performance. Model performance was assessed with the concordance correlation coefficient to concurrently evaluate precision and accuracy. The best model for predicting timing of S. albicosta flight used simple degree-day calculations beginning on 1 March, a 3.3°C (38°F) lower threshold, and a 23.9°C (75°F) upper threshold. The revised cumulative flight model indicated field scouting to estimate moth egg density at the time of 25% flight should begin when 1,432 degree-days (2,577 degree-days °F) have accumulated. These results underscore the importance of assessing multiple parameters in phenological models and utilizing appropriate assessment methods, which in this case may allow for improved timing of field scouting for S. albicosta. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.
Drag Coefficient Estimation in Orbit Determination
McLaughlin, Craig A.; Manee, Steve; Lichtenberg, Travis
2011-07-01
Drag modeling is the greatest uncertainty in the dynamics of low Earth satellite orbits where ballistic coefficient and density errors dominate drag errors. This paper examines fitted drag coefficients found as part of a precision orbit determination process for Stella, Starlette, and the GEOSAT Follow-On satellites from 2000 to 2005. The drag coefficients for the spherical Stella and Starlette satellites are assumed to be highly correlated with density model error. The results using MSIS-86, NRLMSISE-00, and NRLMSISE-00 with dynamic calibration of the atmosphere (DCA) density corrections are compared. The DCA corrections were formulated for altitudes of 200-600 km and are found to be inappropriate when applied at 800 km. The yearly mean fitted drag coefficients are calculated for each satellite for each year studied. The yearly mean drag coefficients are higher for Starlette than Stella, where Starlette is at a higher altitude. The yearly mean fitted drag coefficients for all three satellites decrease as solar activity decreases after solar maximum.
Extinction Coefficient of Gold Nanostars.
de Puig, Helena; Tam, Justina O; Yen, Chun-Wan; Gehrke, Lee; Hamad-Schifferli, Kimberly
2015-07-30
Gold nanostars (NStars) are highly attractive for biological applications due to their surface chemistry, facile synthesis and optical properties. Here, we synthesize NStars in HEPES buffer at different HEPES/Au ratios, producing NStars of different sizes and shapes, and therefore varying optical properties. We measure the extinction coefficient of the synthesized NStars at their maximum surface plasmon resonances (SPR), which range from 5.7 × 10 8 to 26.8 × 10 8 M -1 cm -1 . Measured values correlate with those obtained from theoretical models of the NStars using the discrete dipole approximation (DDA), which we use to simulate the extinction spectra of the nanostars. Finally, because NStars are typically used in biological applications, we conjugate DNA and antibodies to the NStars and calculate the footprint of the bound biomolecules.
International Nuclear Information System (INIS)
Gueven, H.H.; Kardon, B.; Seyfarth, H.
1975-07-01
Theoretical directional correlation coefficiencts are given as 3-j, 6-j, Fsub(k), Asub(k), Rsub(k) and Asub(kk) coefficients for half integer spins up to 15/2 and for transitions up to L = 3. (WL) [de
Geith, Tobias; Biffar, Andreas; Schmidt, Gerwin; Sourbron, Steven; Dietrich, Olaf; Reiser, Maximilian; Baur-Melnyk, Andrea
2015-01-01
To test the hypothesis that apparent diffusion coefficient (ADC) in vertebral bone marrow of benign and malignant fractures is related to the volume of the interstitial space, determined with dynamic contrast-enhanced (DCE) magnetic resonance imaging. Patients with acute benign (n = 24) and malignant (n = 19) vertebral body fractures were examined at 1.5 T. A diffusion-weighted single-shot turbo-spin-echo sequence (b = 100 to 600 s/mm) and DCE turbo-FLASH sequence were evaluated. Regions of interest were manually selected for each fracture. Apparent diffusion coefficient was determined with a monoexponential decay model. The DCE magnetic resonance imaging concentration-time curves were analyzed using a 2-compartment tracer-kinetic model. Apparent diffusion coefficient showed a significant positive correlation with interstitial volume in the whole study population (Pearson r = 0.66, P correlation between ADC and the permeability-surface area product could be observed when analyzing the whole study population (Spearman rs = 0.40, P = 0.008), but not when separately examining the subgroups. Plasma flow showed a significant correlation with ADC in benign fractures (Pearson r = 0.23, P = 0.03). Plasma volume did not show significant correlations with ADC. The results support the hypothesis that the ADC of a lesion is inversely correlated to its cellularity. This explains previous observations that ADC is reduced in more malignant lesions.
Energy Technology Data Exchange (ETDEWEB)
Berrocal T, Mariella J. [Universidade Federal, Rio de Janeiro, RJ (Brazil). Coordenacao dos Programas de Pos-graduacao de Engenharia. Programa de Engenharia Nuclear]|[Universidad Nacional de Ingenieria, Lima (Peru); Roberty, Nilson C. [Universidade Federal, Rio de Janeiro, RJ (Brazil). Coordenacao dos Programas de Pos-graduacao de Engenharia. Programa de Engenharia Nuclear; Silva Neto, Antonio J. [Universidade do Estado, Nova Friburgo, RJ (Brazil). Instituto Politecnico. Dept. de Engenharia Mecanica e Energia]|[Universidade Federal, Rio de Janeiro, RJ (Brazil). Coordenacao dos Programas de Pos-graduacao de Engenharia. Programa de Engenharia Nuclear
2002-07-01
The solution of inverse problems in participating media where there is emission, absorption and dispersion of the radiation possesses several applications in engineering and medicine. The objective of this work is to estimative the coefficients of absorption and dispersion in two-dimensional heterogeneous participating media, using in independent form the Generalized Maximum Entropy and Levenberg Marquardt methods. Both methods are based on the solution of the direct problem that is modeled by the Boltzmann equation in cartesian geometry. Some cases testes are presented. (author)
Directory of Open Access Journals (Sweden)
Heethal Jaiprakash
2016-03-01
Full Text Available This paper is aimed at finding if there was a change of correlation between the written test score and tutors’ performance test scores in the assessment of medical students during a problem-based learning (PBL course in Malaysia. This is a cross-sectional observational study, conducted among 264 medical students in two groups from November 2010 to November 2012. The first group’s tutors did not receive tutor training; while the second group’s tutors were trained in the PBL process. Each group was divided into high, middle and low achievers based on their end-of-semester exam scores. PBL scores were taken which included written test scores and tutors’ performance test scores. Pearson correlation coefficient was calculated between the two kinds of scores in each group. The correlation coefficient between the written scores and tutors’ scores in group 1 was 0.099 (p<0.001 and for group 2 was 0.305 (p<0.001. The higher correlation coefficient in the group where tutors received the PBL training reinforces the importance of tutor training before their participation in the PBL course.
Czech Academy of Sciences Publication Activity Database
Planeta, Josef; Karásek, Pavel; Roth, Michal
2007-01-01
Roč. 111, č. 26 (2007), s. 7620-7625 ISSN 1520-6106 R&D Projects: GA AV ČR KJB400310504; GA ČR GA203/05/2106; GA ČR GA203/07/0886 Institutional research plan: CEZ:AV0Z40310501 Keywords : phosphonium ionic liquid * supercritical carbon dioxide * solute partition coefficient Subject RIV: CB - Analytical Chemistry, Separation Impact factor: 4.086, year: 2007
2010-07-01
... 40 Protection of Environment 5 2010-07-01 2010-07-01 false Illustration of the Minimum Limits for Correlation Coefficient for PM2.5 and PM10â2.5 Class II and III Methods C Figure C-4 to Subpart C of Part 53... Methods and Reference Methods Pt. 53, Subpt. C, Fig. C-4 Figure C-4 to Subpart C of Part 53—Illustration...
Jaiprakash, Heethal; Min, Aung Ko Ko; Ghosh, Sarmishtha
2016-03-01
This paper is aimed at finding if there was a change of correlation between the written test score and tutors' performance test scores in the assessment of medical students during a problem-based learning (PBL) course in Malaysia. This is a cross-sectional observational study, conducted among 264 medical students in two groups from November 2010 to November 2012. The first group's tutors did not receive tutor training; while the second group's tutors were trained in the PBL process. Each group was divided into high, middle and low achievers based on their end-of-semester exam scores. PBL scores were taken which included written test scores and tutors' performance test scores. Pearson correlation coefficient was calculated between the two kinds of scores in each group. The correlation coefficient between the written scores and tutors' scores in group 1 was 0.099 (pcorrelation coefficient in the group where tutors received the PBL training reinforces the importance of tutor training before their participation in the PBL course.
International Nuclear Information System (INIS)
Das, S.K.; Kaminsky, M.; Fenske, G.
1976-01-01
The skin thickness of blisters formed on aluminium by helium-ion irradiation at room temperature for energies from 100 to 1000 keV have been measured. The projected ranges of helium ions in Al for this energy range were calculated using either Brice's formalism (Brice, D.K., 1972, Phys. Rev., vol. A6, 1791) or the one given by Schioett (Schioett, H.E., 1966, K. Danske Vidensk.Selsk., Mat.-Fys. Meddr., vol.35, No.9). For the damage-energy distribution Brice's formalism was used. The measured skin thickness values are smaller than the calculated values of the maxima in the projected range distributions over the entire energy range studied. These results on the ductile metal aluminium are contrasted with the results on relatively brittle refractory metals V and Nb where the measured skin thickness values correlate more closely with the maxima in the projected range probability distributions than with the maxima in the damage-energy distributions. Processes affecting the blister skin fracture and the skin thickness are discussed. (author)
International Nuclear Information System (INIS)
Elias, V.; Univ. of Western Ontario, London, ON; Murison, J.L.; Scadron, M.D.; Steele, T.G.
1993-01-01
The dimension-3 quark-condensate component of the flavour-diagonal axial-vector two-current correlation function is evaluated to all orders in the quark mass m qk through use of the quark-condensate component of the nonperturbative fermion propagator. The result obtained is analytic in p 2 except for a branch cut for 0 2 qk ) 2 , corresponding to a branch cut occurring helow the anti qq kinematic threshold. The deep Euclidean region of the longitudinal component of this correlation function is utilized to obtain leading and subleading contributions to the QCD sum-rule relating m qk to . These same sum-rule results are obtained by means of an alternative derivation involving integration over the discontinuity in the correlation function along the branch cut, demonstrating the consistency of the physical-momentum-region branch cut with results obtained via standard means in the deep Euclidean region. (orig.)
Mohamad Asri, Muhammad Naeim; Mat Desa, Wan Nur Syuhaila; Ismail, Dzulkiflee
2018-01-01
The potential combination of two nondestructive techniques, that is, Raman spectroscopy (RS) and attenuated total reflectance-fourier transform infrared (ATR-FTIR) spectroscopy with Pearson's product moment correlation (PPMC) coefficient (r) and principal component analysis (PCA) to determine the actual source of red gel pen ink used to write a simulated threatening note, was examined. Eighteen (18) red gel pens purchased from Japan and Malaysia from November to December 2014 where one of the pens was used to write a simulated threatening note were analyzed using RS and ATR-FTIR spectroscopy, respectively. The spectra of all the red gel pen inks including the ink deposited on the simulated threatening note gathered from the RS and ATR-FTIR analyses were subjected to PPMC coefficient (r) calculation and principal component analysis (PCA). The coefficients r = 0.9985 and r = 0.9912 for pairwise combination of RS and ATR-FTIR spectra respectively and similarities in terms of PC1 and PC2 scores of one of the inks to the ink deposited on the simulated threatening note substantiated the feasibility of combining RS and ATR-FTIR spectroscopy with PPMC coefficient (r) and PCA for successful source determination of red gel pen inks. The development of pigment spectral library had allowed the ink deposited on the threatening note to be identified as XSL Poppy Red (CI Pigment Red 112). © 2017 American Academy of Forensic Sciences.
Richardson, John C.
This paper presents a study regarding the correlation of the Stanford-Binet: 4th Edition Intelligence Quotient (IQ) scores with the Wechsler Adult Intelligence Scale-Revised (WAIS-R) IQ scores for the purpose of improving the identification process for educable mentally handicapped (EMH) school age adolescents and young adults. The sample included…
Ragui, Karim; Boutra, Abdelkader; Bennacer, Rachid; Labsi, Nabila; Benkahla, Youb Khaled
2018-02-01
The main purpose of our investigation is to show the impact of pertinent parameters; such Lewis and porous thermal Rayleigh numbers as well as the buoyancy and the aspect ratios; on the double-diffusive convection phenomena which occur within a porous annulus; found between a cold (and less concentric) outer circular cylinder and a hot (and concentric) inner one, to come out with global correlations which predict the mean transfer rates in such annulus. To do so, the physical model for the momentum conservation equation is made using the Brinkman extension of the classical Darcy equation. The set of coupled equations is solved using the finite volume method and the SIMPLER algorithm. Summarizing the numerical predictions, global correlations of overall transfer within the porous annulus as a function of the governing studied parameters are set forth which predict within ±2% the numerical results. These correlations may count as a complement to previous researches done in the case a Newtonian-fluid annulus. It is to note that the validity of the computing code used was ascertained by comparing our results with the experimental data and numerical ones already available in the literature.
Kong, Ling-Yan; Zhang, Wei; Zhou, Yue; Xu, Hai; Shi, Hai-Bin; Feng, Qing; Xu, Xiao-Quan; Yu, Tong-Fu
2018-04-01
To investigate the value of apparent diffusion coefficients (ADCs) histogram analysis for assessing World Health Organization (WHO) pathological classification and Masaoka clinical stages of thymic epithelial tumours. 37 patients with histologically confirmed thymic epithelial tumours were enrolled. ADC measurements were performed using hot-spot ROI (ADC HS-ROI ) and histogram-based approach. ADC histogram parameters included mean ADC (ADC mean ), median ADC (ADC median ), 10 and 90 percentile of ADC (ADC 10 and ADC 90 ), kurtosis and skewness. One-way ANOVA, independent-sample t-test, and receiver operating characteristic were used for statistical analyses. There were significant differences in ADC mean , ADC median , ADC 10 , ADC 90 and ADC HS-ROI among low-risk thymoma (type A, AB, B1; n = 14), high-risk thymoma (type B2, B3; n = 9) and thymic carcinoma (type C, n = 14) groups (all p-values histogram analysis may assist in assessing the WHO pathological classification and Masaoka clinical stages of thymic epithelial tumours. Advances in knowledge: 1. ADC histogram analysis could help to assess WHO pathological classification of thymic epithelial tumours. 2. ADC histogram analysis could help to evaluate Masaoka clinical stages of thymic epithelial tumours. 3. ADC 10 might be a promising imaging biomarker for assessing and characterizing thymic epithelial tumours.
Kraft, Clayton N; Pennekamp, Peter H; Becker, Ute; Young, Mei; Diedrich, Oliver; Lüring, Christian; von Falkenhausen, Makus
2009-11-01
Most orthopaedic problems experienced by competitive horseback riders are related to pain in the lower back, hip joint, and hamstring muscles. Riders-especially, show jumpers-are frequently hampered in their performance because of lumbar pain. To date, there has been no research into lumbar disk degeneration in elite competitive riders. Competitive horseback riding accelerates lumbar disk degeneration. Cross-sectional study; Level of evidence, 3. Fifty-eight elite riders (18 men, 40 women; mean age, 32.4 years) and a control group of 30 nonriding volunteers (17 men, 13 women; mean age, 28.7 years) were evaluated for lumbar disk degeneration, cross-sectional area of paraspinal muscles, spondylolysis, and spondylolisthesis, using magnetic resonance imaging (MRI). The prevalence of disk degeneration between the 2 groups was compared, and the relationship was investigated between low back pain (LBP), riding discipline, body mass index (BMI), trunk/leg-length coefficient, and MRI results. Eighty-eight percent of elite riders (n = 51) had a history of LBP, versus 33% of the controls (P back pain. Although riders have a high prevalence of LBP, there is no conclusive MRI evidence to suggest that the cause lies in undue disk degeneration, spondylolysis, spondylolisthesis, or pathologic changes of the paraspinal muscles of the lumbar spine.
Wu, Xia; Zhu, Jian-Cheng; Zhang, Yu; Li, Wei-Min; Rong, Xiang-Lu; Feng, Yi-Fan
2016-08-25
Potential impact of lipid research has been increasingly realized both in disease treatment and prevention. An effective metabolomics approach based on ultra-performance liquid chromatography/quadrupole-time-of-flight mass spectrometry (UPLC/Q-TOF-MS) along with multivariate statistic analysis has been applied for investigating the dynamic change of plasma phospholipids compositions in early type 2 diabetic rats after the treatment of an ancient prescription of Chinese Medicine Huang-Qi-San. The exported UPLC/Q-TOF-MS data of plasma samples were subjected to SIMCA-P and processed by bioMark, mixOmics, Rcomdr packages with R software. A clear score plots of plasma sample groups, including normal control group (NC), model group (MC), positive medicine control group (Flu) and Huang-Qi-San group (HQS), were achieved by principal-components analysis (PCA), partial least-squares discriminant analysis (PLS-DA) and orthogonal partial least-squares discriminant analysis (OPLS-DA). Biomarkers were screened out using student T test, principal component regression (PCR), partial least-squares regression (PLS) and important variable method (variable influence on projection, VIP). Structures of metabolites were identified and metabolic pathways were deduced by correlation coefficient. The relationship between compounds was explained by the correlation coefficient diagram, and the metabolic differences between similar compounds were illustrated. Based on KEGG database, the biological significances of identified biomarkers were described. The correlation coefficient was firstly applied to identify the structure and deduce the metabolic pathways of phospholipids metabolites, and the study provided a new methodological cue for further understanding the molecular mechanisms of metabolites in the process of regulating Huang-Qi-San for treating early type 2 diabetes. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.
Zhu, Y H; Song, S P; Luo, W; Elias, P M; Man, M Q
2011-01-01
Studies have demonstrated that some cutaneous biophysical properties vary with age, gender and body sites. However, the characteristics of the skin friction coefficient in different genders and age groups have not yet been well established. In the present study, we assess the skin friction coefficient in a larger Chinese population. A total of 633 subjects (300 males and 333 females) aged 0.15-79 years were enrolled. A Frictiometer FR 770 and Corneometer CM 825 (C&K MPA 5) were used to measure the skin friction coefficient and stratum corneum hydration, respectively, on the dorsal surface of the hand, the forehead and the canthus. In the females, the maximum skin friction coefficients on both the canthus and the dorsal hand skin were observed around the age of 40 years. In the males, the skin friction coefficient on the dorsal hand skin gradually increased from 0 to 40 years of age, and changed little afterward. Skin friction coefficients on some body sites were higher in females than in age-matched males in some age groups. On the canthus and the dorsal hand skin of females, a positive correlation was found between skin friction coefficient and stratum corneum hydration (p skin friction coefficient was positively correlated with stratum corneum hydration on the forehead and the dorsal hand skin (p skin friction coefficient varies with age, gender and body site, and positively correlates with stratum corneum hydration on some body sites. Copyright © 2010 S. Karger AG, Basel.
Kuznetsov, I A; Serebrov, A P; Solovei, V A; Stepanenko, I V; Vasilev, A V; Mostovoy, Y A; Zimmer, O; Yerozolimsky, B G; Dewey, M S; Wietfeldt, F E
2000-01-01
A technique is described which allows us to measure the ratio lambda=G sub A /G sub V of the weak axial-vector and vector coupling constants in neutron decay without any measurement of the neutron beam polarization. lambda is determined from a combination of the parity-odd angular correlations sigma-> centre dot p-> sub e and sigma-> centre dot p-> subnu between the neutron spin sigma-> and the electron momentum p-> sub e and the anti-neutrino momentum p-> subnu, respectively, both of which are measured in a single experiment using the same neutron beam. A description of the experiment and the results of the first run at the cold neutron beam facility at the Institut Laue-Langevin are presented.
International Nuclear Information System (INIS)
Bauer, F.
2001-01-01
EDDA is an internal experiment at the Cooler Synchrotron COSY of the Forschungszentrum Juelich. The detector is specialized for a detailed study of the elastic proton-proton-scattering and consists of two concentric scintillator hodoscopes of cylindrical symmetry, covering an angular range of 30 ≤θ cm ≤90 in the center of mass system. The reaction vertex and the scattering angle are reconstructed from the points of incidence through the two layers of the detector. The EDDA-Experiment measures angular distributions and excitation functions of five observables of the elastic proton-proton scattering in the energy range 500 MeV≤Tp ≤ 2500 MeV with focus on polarization observables. The first phase was devoted to the measurement of the unpolarized differential cross section dσ/dΩ, the second phase consisted of the measurement of the analyzing power A N . Both are finished and first results have been published. This work deals with the third phase of the EDDA-experiment: the determination of the three spin correlation coeffcients A SS , A NN and A SL , which were measured during three successive beam-times in November/December 1999, May/June 2000 and November/December 2000. For the measurements of the spin observables, a polarized atomic beam target was used with a typical target thickness of 1.8.10 11 cm-2 and effective polarizations between 60% and 70%. Some development during the different beam-times resulted in a polarized COSY-beam with up to 65% polarization at highest energies with 4.10 9 stored protons. These numbers convert into luminosities of 9.0.10 26 cm -2 s -1 ; they were insufficient to perform measurements only during beam acceleration, as it was done for dσ/dΩ and A N to obtain data with sufficient statistics needed for high internal consistency. To accumulate statistics at higher energies, data acquisition for A SS , A NN and A SL during beam acceleration (approx. 2 mio. events) was combined with measurements at some fixed energies. The
Belteki, Gusztav; Lin, Benjamin; Morley, Colin J
2017-10-01
Carbon-dioxide elimination during high-frequency oscillatory ventilation (HFOV) is thought to be proportional to the carbon dioxide diffusion coefficient (DCO 2 ) which is calculated as frequency x (tidal volume) 2 . DCO 2 can be used to as an indicator of CO 2 elimination but values obtained in different patients cannot be directly compared. To analyze the relationship between DCO 2 , the weight-corrected DCO 2 (DCO 2 corr) and blood gas PCO 2 values obtained from infants receiving HFOV. DCO 2 data were obtained from 14 infants at 1/s sampling rate and the mean DCO 2 was determined over 10 min periods preceding the time of the blood gas. DCO 2 corr was calculated by dividing the DCO 2 by the square of the body weight in kg. Weight-correction significantly reduced the inter-individual variability of DCO 2 . When data from all the babies were combined, standard DCO 2 showed no correlation with PCO 2 but DCO 2 corr showed a weak but statistically significant inverse correlation. The correlation was better when the endotracheal leak was correlation between the HFOV tidal volume (VThf) and the PCO 2 . In any baby, DCO 2 corr >50 mL 2 /sec/kg 2 or VThf > 2.5 mL/kg was rarely needed to avoid hypercapnia. Weight-correction of DCO 2 values improved its comparability between patients. Weight-corrected DCO 2 correlated better with PCO 2 than uncorrected DCO 2 but the correlation was weak. © 2017 Wiley Periodicals, Inc.
Approximate maximum parsimony and ancestral maximum likelihood.
Alon, Noga; Chor, Benny; Pardi, Fabio; Rapoport, Anat
2010-01-01
We explore the maximum parsimony (MP) and ancestral maximum likelihood (AML) criteria in phylogenetic tree reconstruction. Both problems are NP-hard, so we seek approximate solutions. We formulate the two problems as Steiner tree problems under appropriate distances. The gist of our approach is the succinct characterization of Steiner trees for a small number of leaves for the two distances. This enables the use of known Steiner tree approximation algorithms. The approach leads to a 16/9 approximation ratio for AML and asymptotically to a 1.55 approximation ratio for MP.
International Nuclear Information System (INIS)
Anon.
1979-01-01
This chapter presents a historic overview of the establishment of radiation guidelines by various national and international agencies. The use of maximum permissible dose and maximum permissible body burden limits to derive working standards is discussed
Energy Technology Data Exchange (ETDEWEB)
Catillon, Ph; Chapellier, M; Garreta, D [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires
1967-07-01
The A{sub xx} and A{sub yy} spin correlation coefficients of the proton-proton scattering have been measured at the laboratory energies of 11,40 - 19,15 - 23,45 and 26,50 MeV for the center of mass scattering angle 90 degrees. These measurements have been made by scattering a polarized proton beam on a polarized proton target. (authors) [French] Les coefficients de correlation de spins A{sub xx} et A{sub yy} de la diffusion proton-proton ont ete mesures aux energies laboratoire de 11,40 - 19,15 - 23,45 et 26,50 MeV pour un angle de diffusion dans le centre de masse egal a 90 degres. Ces mesures ont ete effectuees par la diffusion d'un faisceau de protons polarises sur une cible de protons polarises. (auteur)
Zukotynski, Katherine A; Vajapeyam, Sridhar; Fahey, Frederic H; Kocak, Mehmet; Brown, Douglas; Ricci, Kelsey I; Onar-Thomas, Arzu; Fouladi, Maryam; Poussaint, Tina Young
2017-08-01
The purpose of this study was to describe baseline 18 F-FDG PET voxel characteristics in pediatric diffuse intrinsic pontine glioma (DIPG) and to correlate these metrics with baseline MRI apparent diffusion coefficient (ADC) histogram metrics, progression-free survival (PFS), and overall survival. Methods: Baseline brain 18 F-FDG PET and MRI scans were obtained in 33 children from Pediatric Brain Tumor Consortium clinical DIPG trials. 18 F-FDG PET images, postgadolinium MR images, and ADC MR images were registered to baseline fluid attenuation inversion recovery MR images. Three-dimensional regions of interest on fluid attenuation inversion recovery MR images and postgadolinium MR images and 18 F-FDG PET and MR ADC histograms were generated. Metrics evaluated included peak number, skewness, and kurtosis. Correlation between PET and MR ADC histogram metrics was evaluated. PET pixel values within the region of interest for each tumor were plotted against MR ADC values. The association of these imaging markers with survival was described. Results: PET histograms were almost always unimodal (94%, vs. 6% bimodal). None of the PET histogram parameters (skewness or kurtosis) had a significant association with PFS, although a higher PET postgadolinium skewness tended toward a less favorable PFS (hazard ratio, 3.48; 95% confidence interval [CI], 0.75-16.28 [ P = 0.11]). There was a significant association between higher MR ADC postgadolinium skewness and shorter PFS (hazard ratio, 2.56; 95% CI, 1.11-5.91 [ P = 0.028]), and there was the suggestion that this also led to shorter overall survival (hazard ratio, 2.18; 95% CI, 0.95-5.04 [ P = 0.067]). Higher MR ADC postgadolinium kurtosis tended toward shorter PFS (hazard ratio, 1.30; 95% CI, 0.98-1.74 [ P = 0.073]). PET and MR ADC pixel values were negatively correlated using the Pearson correlation coefficient. Further, the level of PET and MR ADC correlation was significantly positively associated with PFS; tumors with higher
Gaur, Sonia; Harmon, Stephanie; Rosenblum, Lauren; Greer, Matthew D; Mehralivand, Sherif; Coskun, Mehmet; Merino, Maria J; Wood, Bradford J; Shih, Joanna H; Pinto, Peter A; Choyke, Peter L; Turkbey, Baris
2018-05-07
The purposes of this study were to assess correlation of apparent diffusion coefficient (ADC) and normalized ADC (ratio of tumor to nontumor tissue) with the Prostate Imaging Reporting and Data System version 2 (PI-RADSv2) and updated International Society of Urological Pathology (ISUP) categories and to determine how to optimally use ADC metrics for objective assistance in categorizing lesions within PI-RADSv2 guidelines. In this retrospective study, 100 patients (median age, 62 years; range, 44-75 years; prostate-specific antigen level, 7.18 ng/mL; range, 1.70-84.56 ng/mL) underwent 3-T multiparametric MRI of the prostate with an endorectal coil. Mean ADC was extracted from ROIs based on subsequent prostatectomy specimens. Histopathologic analysis revealed 172 lesions (113 peripheral, 59 transition zone). Two radiologists blinded to histopathologic outcome assigned PI-RADSv2 categories. Kendall tau was used to correlate ADC metrics with PI-RADSv2 and ISUP categories. ROC curves were used to assess the utility of ADC metrics in differentiating each reader's PI-RADSv2 DWI category 4 or 5 assessment in the whole prostate and by zone. ADC metrics negatively correlated with ISUP category in the whole prostate (ADC, τ = -0.21, p = 0.0002; normalized ADC, τ = -0.21, p = 0.0001). Moderate negative correlation was found in expert PI-RADSv2 DWI categories (ADC, τ = -0.34; normalized ADC, τ = -0.31; each p correlate with PI-RADSv2 and ISUP categories and can serve as quantitative metrics to assist with assigning PI-RADSv2 DWI category 4 or 5.
Prediction of friction coefficients for gases
Taylor, M. F.
1969-01-01
Empirical relations are used for correlating laminar and turbulent friction coefficients for gases, with large variations in the physical properties, flowing through smooth tubes. These relations have been used to correlate friction coefficients for hydrogen, helium, nitrogen, carbon dioxide and air.
Li, Yunyun; Ji, Feng; Jiang, Yuzhi; Zhao, Ting; Xu, Chongfu
2018-01-01
To explore the correlation of the expression levels of phosphate and tension homology deleted on chromosome ten (PTEN) and p53 of glioblastoma multiforme (GBM) with the value obtained by magnetic resonance spectroscopy (MRS) and apparent diffusion coefficient (ADC) in the tumor and the tumor-adjacent area in magnetic resonance imaging (MRI). A total of 38 patients were operated for GBM. All the patients had received diffusion-weighted imaging (DWI) and MRS prior to surgery. ADC of water molecules and values of metabolite indexes of MRS, including n-acetyl aspartate (NAA), choline (Cho) and creatine (Cr), were recorded, and the ratios of Cho/NAA, Cho/Cr and NAA/Cr were calculated. Hematoxylin-eosin (H&E) staining was done to examine the morphology of tumor and of tumor-adjacent tissues; immunohistochemistry (IHC) was performed to examine the expressions of PTEN and p53 in the tumor and the tumor-adjacent area. Finally, the correlations of the expressions of PTEN and p53 with ADC, Cho/NAA, Cho/Cr and NAA/Cr of the tumor and the tumor-adjacent area were analyzed. H&E staining showed that GBM tissues had disordered morphology, different sizes of cells, large cell nuclei and significant cell heterogeneity. IHC indicated that the expression level of p53 protein in the tumor was significantly higher than in the tumor-adjacent tissues (pCorrelation analysis indicated that PTEN levels in the tumor and the tumor-adjacent area were positively correlated with ADC in the corresponding area, while p53 in the tumor and the tumor-adjacent area was negatively correlated with ADC in the corresponding area. Cho/NAA and Cho/Cr in the tumor were positively correlated with p53 in the tumor, but negatively correlated with PTEN in the tumor. However, NAA/Cr of the tumor was irrelevant to the levels of PTEN and p53. The test results of DWI and MRS of patients with GBM can accurately reflect the inactivation or mutation of PTEN and p53.
Heat transfer coefficient for boiling carbon dioxide
DEFF Research Database (Denmark)
Knudsen, Hans Jørgen Høgaard; Jensen, Per Henrik
1998-01-01
Heat transfer coefficient and pressure drop for boiling carbon dioxide (R744) flowing in a horizontal pipe has been measured. The calculated heat transfer coeeficient has been compared with the Chart correlation of Shah. The Chart Correlation predits too low heat transfer coefficient but the ratio...... between the measured and the calculated heat transfer coefficient is nearly constant and equal 1.9. With this factor the correlation predicts the measured data within 14% (RMS). The pressure drop is of the same order as the measuring uncertainty and the pressure drop has not been compared with correlation's....
Reliability of one-repetition maximum performance in people with chronic heart failure.
Ellis, Rachel; Holland, Anne E; Dodd, Karen; Shields, Nora
2018-02-24
Evaluate intra-rater and inter-rater reliability of the one-repetition maximum strength test in people with chronic heart failure. Intra-rater and inter-rater reliability study. A public tertiary hospital in northern metropolitan Melbourne. Twenty-four participants (nine female, mean age 71.8 ± 13.1 years) with mild to moderate heart failure of any aetiology. Lower limb strength was assessed by determining the maximum weight that could be lifted using a leg press. Intra-rater reliability was tested by one assessor on two separate occasions . Inter-rater reliability was tested by two assessors in random order. Intra-class correlation coefficients and 95% confidence intervals were calculated. Bland and Altman analyses were also conducted, including calculation of mean differences between measures ([Formula: see text]) and limits of agreement . Ten intra-rater and 21 inter-rater assessments were completed. Excellent intra-rater (intra-class correlation coefficient 2,1 0.96) and inter-rater (intra-class correlation coefficient 2,1 0.93) reliability was found. Intra-rater assessment showed less variability (mean difference 4.5 kg, limits of agreement -8.11 to 17.11 kg) than inter-rater agreement (mean difference -3.81 kg, limits of agreement -23.39 to 15.77 kg). One-repetition maximum determined using a leg press is a reliable measure in people with heart failure. Given its smaller limits of agreement, intra-rater testing is recommended. Implications for Rehabilitation Using a leg press to determine a one-repetition maximum we were able to demonstrate excellent inter-rater and intra-rater reliability using an intra-class correlation coefficient. The Bland and Altman levels of agreement were wide for inter-rater reliability and so we recommend using one assessor if measuring change in strength within an individual over time.
Power coefficient anomaly in JOYO
Energy Technology Data Exchange (ETDEWEB)
Yamamoto, H
1980-12-15
Operation of the JOYO experimental fast reactor with the MK-I core has been divided into two phases: (1) 50 MWt power ascension and operation; and (2) 75 MWt power ascension and operation. The 50 MWt power-up tests were conducted in August 1978. In these tests, the measured reactivity loss due to power increases from 15 MWt to 50 MWt was 0.28% ..delta.. K/K, and agreed well with the predicted value of 0.27% ..delta.. K/K. The 75 MWt power ascension tests were conducted in July-August 1979. In the process of the first power increase above 50 MWt to 65 MWt conducted on July 11, 1979, an anomalously large negative power coefficient was observed. The value was about twice the power coefficient values measured in the tests below 50 MW. In order to reproduce the anomaly, the reactor power was decreased and again increased up to the maximum power of 65 MWt. However, the large negative power coefficient was not observed at this time. In the succeeding power increase from 65 MWt to 75 MWt, a similar anomalous power coefficient was again observed. This anomaly disappeared in the subsequent power ascensions to 75 MWt, and the magnitude of the power coefficient gradually decreased with power cycles above the 50 MWt level.
An eight-legged tactile sensor to estimate coefficient of static friction.
Wei Chen; Rodpongpun, Sura; Luo, William; Isaacson, Nathan; Kark, Lauren; Khamis, Heba; Redmond, Stephen J
2015-08-01
It is well known that a tangential force larger than the maximum static friction force is required to initiate the sliding motion between two objects, which is governed by a material constant called the coefficient of static friction. Therefore, knowing the coefficient of static friction is of great importance for robot grippers which wish to maintain a stable and precise grip on an object during various manipulation tasks. Importantly, it is most useful if grippers can estimate the coefficient of static friction without having to explicitly explore the object first, such as lifting the object and reducing the grip force until it slips. A novel eight-legged sensor, based on simplified theoretical principles of friction is presented here to estimate the coefficient of static friction between a planar surface and the prototype sensor. Each of the sensor's eight legs are straight and rigid, and oriented at a specified angle with respect to the vertical, allowing it to estimate one of five ranges (5 = 8/2 + 1) that the coefficient of static friction can occupy. The coefficient of friction can be estimated by determining whether the legs have slipped or not when pressed against a surface. The coefficients of static friction between the sensor and five different materials were estimated and compared to a measurement from traditional methods. A least-squares linear fit of the sensor estimated coefficient showed good correlation with the reference coefficient with a gradient close to one and an r(2) value greater than 0.9.
Auplish, Aashima; Clarke, Alison S; Van Zanten, Trent; Abel, Kate; Tham, Charmaine; Bhutia, Thinlay N; Wilks, Colin R; Stevenson, Mark A; Firestone, Simon M
2017-05-01
Educational initiatives targeting at-risk populations have long been recognized as a mainstay of ongoing rabies control efforts. Cluster-based studies are often utilized to assess levels of knowledge, attitudes and practices of a population in response to education campaigns. The design of cluster-based studies requires estimates of intra-cluster correlation coefficients obtained from previous studies. This study estimates the school-level intra-cluster correlation coefficient (ICC) for rabies knowledge change following an educational intervention program. A cross-sectional survey was conducted with 226 students from 7 schools in Sikkim, India, using cluster sampling. In order to assess knowledge uptake, rabies education sessions with pre- and post-session questionnaires were administered. Paired differences of proportions were estimated for questions answered correctly. A mixed effects logistic regression model was developed to estimate school-level and student-level ICCs and to test for associations between gender, age, school location and educational level. The school- and student-level ICCs for rabies knowledge and awareness were 0.04 (95% CI: 0.01, 0.19) and 0.05 (95% CI: 0.2, 0.09), respectively. These ICCs suggest design effect multipliers of 5.45 schools and 1.05 students per school, will be required when estimating sample sizes and designing future cluster randomized trials. There was a good baseline level of rabies knowledge (mean pre-session score 71%), however, key knowledge gaps were identified in understanding appropriate behavior around scared dogs, potential sources of rabies and how to correctly order post rabies exposure precaution steps. After adjusting for the effect of gender, age, school location and education level, school and individual post-session test scores improved by 19%, with similar performance amongst boys and girls attending schools in urban and rural regions. The proportion of participants that were able to correctly order post
Maximum Acceleration Recording Circuit
Bozeman, Richard J., Jr.
1995-01-01
Coarsely digitized maximum levels recorded in blown fuses. Circuit feeds power to accelerometer and makes nonvolatile record of maximum level to which output of accelerometer rises during measurement interval. In comparison with inertia-type single-preset-trip-point mechanical maximum-acceleration-recording devices, circuit weighs less, occupies less space, and records accelerations within narrower bands of uncertainty. In comparison with prior electronic data-acquisition systems designed for same purpose, circuit simpler, less bulky, consumes less power, costs and analysis of data recorded in magnetic or electronic memory devices. Circuit used, for example, to record accelerations to which commodities subjected during transportation on trucks.
Maximum Quantum Entropy Method
Sim, Jae-Hoon; Han, Myung Joon
2018-01-01
Maximum entropy method for analytic continuation is extended by introducing quantum relative entropy. This new method is formulated in terms of matrix-valued functions and therefore invariant under arbitrary unitary transformation of input matrix. As a result, the continuation of off-diagonal elements becomes straightforward. Without introducing any further ambiguity, the Bayesian probabilistic interpretation is maintained just as in the conventional maximum entropy method. The applications o...
International Nuclear Information System (INIS)
Biondi, L.
1998-01-01
The charging for a service is a supplier's remuneration for the expenses incurred in providing it. There are currently two charges for electricity: consumption and maximum demand. While no problem arises about the former, the issue is more complicated for the latter and the analysis in this article tends to show that the annual charge for maximum demand arbitrarily discriminates among consumer groups, to the disadvantage of some [it
Maximum entropy principal for transportation
International Nuclear Information System (INIS)
Bilich, F.; Da Silva, R.
2008-01-01
In this work we deal with modeling of the transportation phenomenon for use in the transportation planning process and policy-impact studies. The model developed is based on the dependence concept, i.e., the notion that the probability of a trip starting at origin i is dependent on the probability of a trip ending at destination j given that the factors (such as travel time, cost, etc.) which affect travel between origin i and destination j assume some specific values. The derivation of the solution of the model employs the maximum entropy principle combining a priori multinomial distribution with a trip utility concept. This model is utilized to forecast trip distributions under a variety of policy changes and scenarios. The dependence coefficients are obtained from a regression equation where the functional form is derived based on conditional probability and perception of factors from experimental psychology. The dependence coefficients encode all the information that was previously encoded in the form of constraints. In addition, the dependence coefficients encode information that cannot be expressed in the form of constraints for practical reasons, namely, computational tractability. The equivalence between the standard formulation (i.e., objective function with constraints) and the dependence formulation (i.e., without constraints) is demonstrated. The parameters of the dependence-based trip-distribution model are estimated, and the model is also validated using commercial air travel data in the U.S. In addition, policy impact analyses (such as allowance of supersonic flights inside the U.S. and user surcharge at noise-impacted airports) on air travel are performed.
Maximum likely scale estimation
DEFF Research Database (Denmark)
Loog, Marco; Pedersen, Kim Steenstrup; Markussen, Bo
2005-01-01
A maximum likelihood local scale estimation principle is presented. An actual implementation of the estimation principle uses second order moments of multiple measurements at a fixed location in the image. These measurements consist of Gaussian derivatives possibly taken at several scales and/or ...
International Nuclear Information System (INIS)
Deleporte, Amelie; Charette, Nicolas; Machiels, Godelieve; Piccart, Martine; Flamen, Patrick; Hendlisz, Alain; Paesmans, Marianne; Garcia, Camilo; Vandeputte, Caroline; Lemort, Marc; Engelholm, Jean-Luc; Hoerner, Frederic; Aftimos, Philippe; Awada, Ahmad
2014-01-01
Metastatic colorectal cancer (mCRC) may present various behaviours that define different courses of tumor evolution. There is presently no available tool designed to assess tumor aggressiveness, despite the fact that this is considered to have a major impact on patient outcome. CORIOLAN is a single-arm prospective interventional non-therapeutic study aiming mainly to assess the natural tumor metabolic progression index (TMPI) measured by serial FDG PET-CT without any intercurrent antitumor therapy as a prognostic factor for overall survival (OS) in patients with mCRC. Secondary objectives of the study aim to test the TMPI as a prognostic marker for progression-free survival (PFS), to assess the prognostic value of baseline tumor FDG uptake on PFS and OS, to compare TMPI to classical clinico-biological assessment of prognosis, and to test the prognostic value on OS and PFS of MRI-based apparent diffusion coefficient (ADC) and variation of vADC using voxel-based diffusion maps. Additionally, this study intends to identify genomic and epigenetic factors that correlate with progression of tumors and the OS of patients with mCRC. Consequently, this analysis will provide information about the signaling pathways that determine the natural and therapy-free course of the disease. Finally, it would be of great interest to investigate whether in a population of patients with mCRC, for which at present no known effective therapy is available, tumor aggressiveness is related to elevated levels of circulating tumor cells (CTCs) and to patient outcome. Tumor aggressiveness is one of the major determinants of patient outcome in advanced disease. Despite its importance, supported by findings reported in the literature of extreme outcomes for patients with mCRC treated with chemotherapy, no objective tool allows clinicians to base treatment decisions on this factor. The CORIOLAN study will characterize TMPI using FDG-PET-based metabolic imaging of patients with chemorefractory m
Virial Coefficients for the Liquid Argon
Korth, Micheal; Kim, Saesun
2014-03-01
We begin with a geometric model of hard colliding spheres and calculate probability densities in an iterative sequence of calculations that lead to the pair correlation function. The model is based on a kinetic theory approach developed by Shinomoto, to which we added an interatomic potential for argon based on the model from Aziz. From values of the pair correlation function at various values of density, we were able to find viral coefficients of liquid argon. The low order coefficients are in good agreement with theoretical hard sphere coefficients, but appropriate data for argon to which these results might be compared is difficult to find.
International Nuclear Information System (INIS)
Enslin, J.H.R.
1990-01-01
A well engineered renewable remote energy system, utilizing the principal of Maximum Power Point Tracking can be m ore cost effective, has a higher reliability and can improve the quality of life in remote areas. This paper reports that a high-efficient power electronic converter, for converting the output voltage of a solar panel, or wind generator, to the required DC battery bus voltage has been realized. The converter is controlled to track the maximum power point of the input source under varying input and output parameters. Maximum power point tracking for relative small systems is achieved by maximization of the output current in a battery charging regulator, using an optimized hill-climbing, inexpensive microprocessor based algorithm. Through practical field measurements it is shown that a minimum input source saving of 15% on 3-5 kWh/day systems can easily be achieved. A total cost saving of at least 10-15% on the capital cost of these systems are achievable for relative small rating Remote Area Power Supply systems. The advantages at larger temperature variations and larger power rated systems are much higher. Other advantages include optimal sizing and system monitor and control
A drying coefficient for building materials
DEFF Research Database (Denmark)
Scheffler, Gregor Albrecht; Plagge, Rudolf
2009-01-01
coefficient is defined which can be determined based on measured drying data. The correlation of this coefficient with the water absorption and the vapour diffusion coefficient is analyzed and its additional information content is critically challenged. As result, a drying coefficient has been derived......The drying experiment is an important element of the hygrothermal characterisation of building materials. Contrary to other moisture transport experiments as the vapour diffusion and the water absorption test, it is until now not possible to derive a simple coefficient for the drying. However......, in many cases such a coefficient would be highly appreciated, e.g. in interaction of industry and research or for the distinction and selection of suitable building materials throughout design and practise. This article first highlights the importance of drying experiments for hygrothermal...
Energy Technology Data Exchange (ETDEWEB)
Mery, A
2007-07-15
The central topic of this work is the study of the properties and the implementation of a Paul trap used for the measurement of the beta-neutrino angular correlation parameter in the decay of {sup 6}He. This coefficient provides a signature of the nature of the interactions involved in the weak interaction. The value of this coefficient can be deduced from the kinematical distribution of the decay events. An electromagnetic trap is used for the trapping of {sup 6}He{sup +} ions in a small volume. This trap has an open geometry that enables the detection in coincidence of the electron and the recoil ion emitted in the beta decay. A dedicated detection set up is used for the measurement of the electron energy, the ion time of flight and the position of the two particles for each event. A general description of the LPCTrap facility and of its performances is presented and shows that this set up is able to fulfill the proposed measurement. Especially, a comparison is made between the characteristics of the ion cloud obtained from Monte Carlo simulations and the experimental measurements with a good agreement. More than 100 000 coincident events have been recorded during the first experiment. A preliminary analysis of these results is shown. It includes a description of the different observables as well as a comparison between the experimental time of flight spectrum and the simulated spectrum. These data will allow a measurement of the angular correlation parameter with a statistical error smaller than 2 %. (author)
International Nuclear Information System (INIS)
Zokaei-Kadijani, S.; Safdari, J.; Mousavian, M.A.; Rashidi, A.
2013-01-01
Highlights: ► Mass transfer coefficient does not depend on biomass concentration. ► The pulp density has a negative effect on mass transfer coefficient. ► The pulp density is the unique factor that affects maximum OUR. ► In this work, Neale’s correlation is corrected for prediction of mass transfer coefficient. ► Biochemical reaction is a limiting factor in the uranium bioleaching process. - Abstract: In this work, the volumetric oxygen mass transfer coefficient and the oxygen uptake rate (OUR) were studied for uranium ore bioleaching process by Acidthiobacillus ferrooxidans in a stirred tank reactor. The Box-Bohnken design method was used to study the effect of operating parameters on the oxygen mass transfer coefficient. The investigated factors were agitation speed (rpm), aeration rate (vvm) and pulp density (% weight/volume) of the stirred tank reactor. Analysis of experimental results showed that the oxygen mass transfer coefficient had low dependence on biomass concentration but had higher dependence on the agitation speed, aeration rate and pulp density. The obtained biological enhancement factors were equal to ones in experiments. On the other hand, the obtained values for Damkohler number (Da < 0.468) indicated that the process was limited by the biochemical reaction rate. Experimental results obtained for oxygen mass transfer coefficient were correlated with the empirical relations proposed by Garcia-Ochoa and Gomez (2009) and Neale and Pinches (1994). Due to the high relative error in the correlation of Neale and Pinches, that correlation was corrected and the coefficient of determination was calculated to be 89%. The modified correlation has been obtained based on a wide range of operating conditions, which can be used to determine the mass transfer coefficient in a bioreactor
Transport Coefficients of Fluids
Eu, Byung Chan
2006-01-01
Until recently the formal statistical mechanical approach offered no practicable method for computing the transport coefficients of liquids, and so most practitioners had to resort to empirical fitting formulas. This has now changed, as demonstrated in this innovative monograph. The author presents and applies new methods based on statistical mechanics for calculating the transport coefficients of simple and complex liquids over wide ranges of density and temperature. These molecular theories enable the transport coefficients to be calculated in terms of equilibrium thermodynamic properties, and the results are shown to account satisfactorily for experimental observations, including even the non-Newtonian behavior of fluids far from equilibrium.
International Nuclear Information System (INIS)
Ponman, T.J.
1984-01-01
For some years now two different expressions have been in use for maximum entropy image restoration and there has been some controversy over which one is appropriate for a given problem. Here two further entropies are presented and it is argued that there is no single correct algorithm. The properties of the four different methods are compared using simple 1D simulations with a view to showing how they can be used together to gain as much information as possible about the original object. (orig.)
Energy Technology Data Exchange (ETDEWEB)
Klauser, A.S.; Kremser, C. [Medical University of Innsbruck, Department of Radiology, Innsbruck (Austria); Abd Ellah, M. [Medical University of Innsbruck, Department of Radiology, Innsbruck (Austria); Assiut University, Department of Diagnostic Radiology, South Egypt Cancer Institute, Assiut (Egypt); Taljanovic, M. [University of Arizona, College of Medicine, Banner- University Medical Center, Department of Medical Imaging, Tucson (United States); Schmidle, G.; Gabl, M. [Medical University of Innsbruck, Department for Trauma Surgery, Innsbruck (Austria); Cartes-Zumelzu, F.; Steiger, R.; Gizewski, E.R. [Medical University of Innsbruck, Department of Neuroradiology, Neuroimaging core facility, Innsbruck (Austria)
2018-03-15
To quantitatively assess carpal tunnel syndrome (CTS) with DTI by evaluating two approaches to determine cut-off values. In forty patients with CTS diagnosis confirmed by nerve conduction studies (NCs) and 14 healthy subjects (mean age 58.54 and 57.8 years), cross-sectional area (CSA), apparent diffusion coefficient (ADC) and fractional anisotropy (FA) at single and multiple levels with intraobserver agreement were evaluated. Maximum and mean CSA and FA showed significant differences between healthy subjects and patients (12.85 mm{sup 2} vs. 28.18 mm{sup 2}, p < 0.001, and 0.613 vs. 0.524, p=0.007, respectively) (10.12 mm{sup 2} vs. 19.9 mm{sup 2}, p<0.001 and 0.617 vs. 0.54, p=0.003, respectively), but not maximum and mean ADC (p > 0.05). For cut-off values, mean and maximum CSA showed the same sensitivity and specificity (93.3 %). However, mean FA showed better sensitivity than maximum FA (82.6 % vs. 73.9 %), but lower specificity (66.7 % vs. 80 %), and significant correlation for maximum CSA, 97 % (p < 0.01), with good correlation for maximum ADC and FA, 84.5 % (p < 0.01) and 62 % (p=0.056), respectively. CSA and FA showed significant differences between healthy subjects and patients. Single measurement at maximum CSA is suitable for FA determination. (orig.)
Główka, Franciszek K; Romański, Michał; Siemiątkowska, Anna
2013-04-01
For the last decade an alkylating agent treosulfan (TREO) has been successfully applied in clinical trials in conditioning prior to hematopoietic stem cell transplantation. Pharmacological activity of the pro-drug depends on its epoxy-transformers, monoepoxide (S,S-EBDM) and diepoxide (S,S-DEB), which are formed in a non-enzymatic consecutive reaction accompanied by a release of methanesulfonic acid. In the present study partition coefficient n-octanol/water (POW) of TREO as well as its biologically active epoxy-transformers was determined empirically (applying a classical shake-flask method) and in silico for the first time. In vitro the partition was investigated at 37°C in the system composed of the pre-saturated n-octanol and 0.05 M acetate buffer pH 4.4 adjusted with sodium and potassium chloride to ionic strength of 0.16 M. Concentration of the analytes was quantified by reversed-phase high performance liquid chromatography (RP-HPLC) method in which retention time increased from S,S-DEB to TREO. It was shown that neither association nor dissociation of the tested compounds in the applied phases occurred. Calculated logPOW (TREO: -1.58±0.04, S,S-EBDM: -1.18±0.02, S,S-DEB: -0.40±0.03) indicate the hydrophilic character of the all three entities, corresponding to its pharmacokinetic parameters described in the literature. Experimentally determined logPOW of the compounds were best comparable to the values predicted by algorithm ALOGPs. Interestingly, the POW values determined in vitro as well as in silico were inversely correlated with the retention times observed in the endcapped RP-HPLC column. It might be explained by the fact that a cleavage of methansulfonic acid from a small molecule of TREO generates significant changes in the molecular structure. Consequently, despite the common chemical origin, TREO, S,S-EBDM and S,S-DEB do not constitute a 'congeneric' series of compounds. We concluded that this might occur in other low-weight species, therefore
Clark, P.U.; Dyke, A.S.; Shakun, J.D.; Carlson, A.E.; Clark, J.; Wohlfarth, B.; Mitrovica, J.X.; Hostetler, S.W.; McCabe, A.M.
2009-01-01
We used 5704 14C, 10Be, and 3He ages that span the interval from 10,000 to 50,000 years ago (10 to 50 ka) to constrain the timing of the Last Glacial Maximum (LGM) in terms of global ice-sheet and mountain-glacier extent. Growth of the ice sheets to their maximum positions occurred between 33.0 and 26.5 ka in response to climate forcing from decreases in northern summer insolation, tropical Pacific sea surface temperatures, and atmospheric CO2. Nearly all ice sheets were at their LGM positions from 26.5 ka to 19 to 20 ka, corresponding to minima in these forcings. The onset of Northern Hemisphere deglaciation 19 to 20 ka was induced by an increase in northern summer insolation, providing the source for an abrupt rise in sea level. The onset of deglaciation of the West Antarctic Ice Sheet occurred between 14 and 15 ka, consistent with evidence that this was the primary source for an abrupt rise in sea level ???14.5 ka.
Implications of NGA for NEHRP site coefficients
Borcherdt, Roger D.
2012-01-01
Three proposals are provided to update tables 11.4-1 and 11.4-2 of Minimum Design Loads for Buildings and Other Structures (7-10), by the American Society of Civil Engineers (2010) (ASCE/SEI 7-10), with site coefficients implied directly by NGA (Next Generation Attenuation) ground motion prediction equations (GMPEs). Proposals include a recommendation to use straight-line interpolation to infer site coefficients at intermediate values of ̅vs (average shear velocity). Site coefficients are recommended to ensure consistency with ASCE/SEI 7-10 MCER (Maximum Considered Earthquake) seismic-design maps and simplified site-specific design spectra procedures requiring site classes with associated tabulated site coefficients and a reference site class with unity site coefficients. Recommended site coefficients are confirmed by independent observations of average site amplification coefficients inferred with respect to an average ground condition consistent with that used for the MCER maps. The NGA coefficients recommended for consideration are implied directly by the NGA GMPEs and do not require introduction of additional models.
Directory of Open Access Journals (Sweden)
F. TopsÃƒÂ¸e
2001-09-01
Full Text Available Abstract: In its modern formulation, the Maximum Entropy Principle was promoted by E.T. Jaynes, starting in the mid-fifties. The principle dictates that one should look for a distribution, consistent with available information, which maximizes the entropy. However, this principle focuses only on distributions and it appears advantageous to bring information theoretical thinking more prominently into play by also focusing on the "observer" and on coding. This view was brought forward by the second named author in the late seventies and is the view we will follow-up on here. It leads to the consideration of a certain game, the Code Length Game and, via standard game theoretical thinking, to a principle of Game Theoretical Equilibrium. This principle is more basic than the Maximum Entropy Principle in the sense that the search for one type of optimal strategies in the Code Length Game translates directly into the search for distributions with maximum entropy. In the present paper we offer a self-contained and comprehensive treatment of fundamentals of both principles mentioned, based on a study of the Code Length Game. Though new concepts and results are presented, the reading should be instructional and accessible to a rather wide audience, at least if certain mathematical details are left aside at a rst reading. The most frequently studied instance of entropy maximization pertains to the Mean Energy Model which involves a moment constraint related to a given function, here taken to represent "energy". This type of application is very well known from the literature with hundreds of applications pertaining to several different elds and will also here serve as important illustration of the theory. But our approach reaches further, especially regarding the study of continuity properties of the entropy function, and this leads to new results which allow a discussion of models with so-called entropy loss. These results have tempted us to speculate over
Probable maximum flood control
International Nuclear Information System (INIS)
DeGabriele, C.E.; Wu, C.L.
1991-11-01
This study proposes preliminary design concepts to protect the waste-handling facilities and all shaft and ramp entries to the underground from the probable maximum flood (PMF) in the current design configuration for the proposed Nevada Nuclear Waste Storage Investigation (NNWSI) repository protection provisions were furnished by the United States Bureau of Reclamation (USSR) or developed from USSR data. Proposed flood protection provisions include site grading, drainage channels, and diversion dikes. Figures are provided to show these proposed flood protection provisions at each area investigated. These areas are the central surface facilities (including the waste-handling building and waste treatment building), tuff ramp portal, waste ramp portal, men-and-materials shaft, emplacement exhaust shaft, and exploratory shafts facility
Introduction to maximum entropy
International Nuclear Information System (INIS)
Sivia, D.S.
1988-01-01
The maximum entropy (MaxEnt) principle has been successfully used in image reconstruction in a wide variety of fields. We review the need for such methods in data analysis and show, by use of a very simple example, why MaxEnt is to be preferred over other regularizing functions. This leads to a more general interpretation of the MaxEnt method, and its use is illustrated with several different examples. Practical difficulties with non-linear problems still remain, this being highlighted by the notorious phase problem in crystallography. We conclude with an example from neutron scattering, using data from a filter difference spectrometer to contrast MaxEnt with a conventional deconvolution. 12 refs., 8 figs., 1 tab
International Nuclear Information System (INIS)
Rust, D.M.
1984-01-01
The successful retrieval and repair of the Solar Maximum Mission (SMM) satellite by Shuttle astronauts in April 1984 permitted continuance of solar flare observations that began in 1980. The SMM carries a soft X ray polychromator, gamma ray, UV and hard X ray imaging spectrometers, a coronagraph/polarimeter and particle counters. The data gathered thus far indicated that electrical potentials of 25 MeV develop in flares within 2 sec of onset. X ray data show that flares are composed of compressed magnetic loops that have come too close together. Other data have been taken on mass ejection, impacts of electron beams and conduction fronts with the chromosphere and changes in the solar radiant flux due to sunspots. 13 references
Introduction to maximum entropy
International Nuclear Information System (INIS)
Sivia, D.S.
1989-01-01
The maximum entropy (MaxEnt) principle has been successfully used in image reconstruction in a wide variety of fields. The author reviews the need for such methods in data analysis and shows, by use of a very simple example, why MaxEnt is to be preferred over other regularizing functions. This leads to a more general interpretation of the MaxEnt method, and its use is illustrated with several different examples. Practical difficulties with non-linear problems still remain, this being highlighted by the notorious phase problem in crystallography. He concludes with an example from neutron scattering, using data from a filter difference spectrometer to contrast MaxEnt with a conventional deconvolution. 12 refs., 8 figs., 1 tab
Functional Maximum Autocorrelation Factors
DEFF Research Database (Denmark)
Larsen, Rasmus; Nielsen, Allan Aasbjerg
2005-01-01
MAF outperforms the functional PCA in concentrating the interesting' spectra/shape variation in one end of the eigenvalue spectrum and allows for easier interpretation of effects. Conclusions. Functional MAF analysis is a useful methods for extracting low dimensional models of temporally or spatially......Purpose. We aim at data where samples of an underlying function are observed in a spatial or temporal layout. Examples of underlying functions are reflectance spectra and biological shapes. We apply functional models based on smoothing splines and generalize the functional PCA in......\\verb+~+\\$\\backslash\\$cite{ramsay97} to functional maximum autocorrelation factors (MAF)\\verb+~+\\$\\backslash\\$cite{switzer85,larsen2001d}. We apply the method to biological shapes as well as reflectance spectra. {\\$\\backslash\\$bf Methods}. MAF seeks linear combination of the original variables that maximize autocorrelation between...
Regularized maximum correntropy machine
Wang, Jim Jing-Yan; Wang, Yunji; Jing, Bing-Yi; Gao, Xin
2015-01-01
In this paper we investigate the usage of regularized correntropy framework for learning of classifiers from noisy labels. The class label predictors learned by minimizing transitional loss functions are sensitive to the noisy and outlying labels of training samples, because the transitional loss functions are equally applied to all the samples. To solve this problem, we propose to learn the class label predictors by maximizing the correntropy between the predicted labels and the true labels of the training samples, under the regularized Maximum Correntropy Criteria (MCC) framework. Moreover, we regularize the predictor parameter to control the complexity of the predictor. The learning problem is formulated by an objective function considering the parameter regularization and MCC simultaneously. By optimizing the objective function alternately, we develop a novel predictor learning algorithm. The experiments on two challenging pattern classification tasks show that it significantly outperforms the machines with transitional loss functions.
Regularized maximum correntropy machine
Wang, Jim Jing-Yan
2015-02-12
In this paper we investigate the usage of regularized correntropy framework for learning of classifiers from noisy labels. The class label predictors learned by minimizing transitional loss functions are sensitive to the noisy and outlying labels of training samples, because the transitional loss functions are equally applied to all the samples. To solve this problem, we propose to learn the class label predictors by maximizing the correntropy between the predicted labels and the true labels of the training samples, under the regularized Maximum Correntropy Criteria (MCC) framework. Moreover, we regularize the predictor parameter to control the complexity of the predictor. The learning problem is formulated by an objective function considering the parameter regularization and MCC simultaneously. By optimizing the objective function alternately, we develop a novel predictor learning algorithm. The experiments on two challenging pattern classification tasks show that it significantly outperforms the machines with transitional loss functions.
Alonso de Mezquia, David; Wang, Zilin; Lapeira, Estela; Klein, Michael; Wiegand, Simone; Mounir Bou-Ali, M
2014-11-01
In this study, the thermodiffusion, molecular diffusion, and Soret coefficients of 12 binary mixtures composed of toluene, n-hexane and n-dodecane in the whole range of concentrations at atmospheric pressure and temperatures of 298.15 K and 308.15 K have been determined. The experimental measurements have been carried out using the Thermogravitational Column, the Sliding Symmetric Tubes and the Thermal Diffusion Forced Rayleigh Scattering techniques. The results obtained using the different techniques show a maximum deviation of 9% for the thermodiffusion coefficient, 8% for the molecular diffusion coefficient and 2% for the Soret coefficient. For the first time we report a decrease of the thermodiffusion coefficient with increasing ratio of the thermal expansion coefficient and viscosity for a binary mixture of an organic ring compound with a short n-alkane. This observation is discussed in terms of interactions between the different components. Additionally, the thermogravitational technique has been used to measure the thermodiffusion coefficients of four ternary mixtures consisting of toluene, n-hexane and n-dodecane at 298.15 K. In order to complete the study, the values obtained for the molecular diffusion coefficient in binary mixtures, and the thermodiffusion coefficient of binary and ternary mixtures have been compared with recently derived correlations.
Discharge Coefficient of Rectangular Short-Crested Weir with Varying Slope Coefficients
Directory of Open Access Journals (Sweden)
Yuejun Chen
2018-02-01
Full Text Available Rectangular short-crested weirs are widely used for simple structure and high discharge capacity. As one of the most important and influential factors of discharge capacity, side slope can improve the hydraulic characteristics of weirs at special conditions. In order to systemically study the effects of upstream and downstream slope coefficients S1 and S2 on overflow discharge coefficient in a rectangular short-crested weir the Volume of Fluid (VOF method and the Renormalization Group (RNG κ-ε turbulence model are used. In this study, the slope coefficient ranges from V to 3H:1V and each model corresponds to five total energy heads of H0 ranging from 8.0 to 24.0 cm. Comparisons of discharge coefficients and free surface profiles between simulated and laboratory results display a good agreement. The simulated results show that the difference of discharge coefficients will decrease with upstream slopes and increase with downstream slopes as H0 increases. For a given H0, the discharge coefficient has a convex parabolic relation with S1 and a piecewise linearity relation with S2. The maximum discharge coefficient is always obtained at S2 = 0.8. There exists a difference between upstream and downstream slope coefficients in the influence range of free surface curvatures. Furthermore, a proposed discharge coefficient equation by nonlinear regression is a function of upstream and downstream slope coefficients.
International Nuclear Information System (INIS)
Ryan, J.
1981-01-01
By understanding the sun, astrophysicists hope to expand this knowledge to understanding other stars. To study the sun, NASA launched a satellite on February 14, 1980. The project is named the Solar Maximum Mission (SMM). The satellite conducted detailed observations of the sun in collaboration with other satellites and ground-based optical and radio observations until its failure 10 months into the mission. The main objective of the SMM was to investigate one aspect of solar activity: solar flares. A brief description of the flare mechanism is given. The SMM satellite was valuable in providing information on where and how a solar flare occurs. A sequence of photographs of a solar flare taken from SMM satellite shows how a solar flare develops in a particular layer of the solar atmosphere. Two flares especially suitable for detailed observations by a joint effort occurred on April 30 and May 21 of 1980. These flares and observations of the flares are discussed. Also discussed are significant discoveries made by individual experiments
Assessing Reliability of a Multi-Dimensional Scale by Coefficient Alpha
Directory of Open Access Journals (Sweden)
Ivan Šerbetar
2016-04-01
Full Text Available The purpose of the study was to assess internal consistency by calculating coefficient alpha. It presents the variation in coefficient alpha, depending on questionnaire length and the homogeneity or heterogeneity of the questionnaire. The maximum possible value for coefficient alpha was also calculated by the item elimination method. The study included 99 children aged 10. The children completed The Athletic Coping Skills Inventory – 28 (ACSI-28; Smith et al., 1995, which contains seven constructs: coping with adversity, coachability, concentration, confidence and achievement motivation, goal setting and mental preparation, peaking under pressure and freedom from worry. The results confirmed that the values of the alpha coefficient vary depending on the number and composition of items and the sample size. In terms of item structure, homogeneous constructs yielded lower values for the alpha coefficient (in a range from .48 to .61 than the questionnaire with all the constructs (alpha = .79, despite higher inter-item correlations. In terms of the number of items, the longer test generated higher alpha coefficients (alpha = .79 than the shorter test (half-sets of items = .60, .73, .69, .70. A higher overall value (alpha = .83 can be achieved by item elimination.
Maximum a posteriori decoder for digital communications
Altes, Richard A. (Inventor)
1997-01-01
A system and method for decoding by identification of the most likely phase coded signal corresponding to received data. The present invention has particular application to communication with signals that experience spurious random phase perturbations. The generalized estimator-correlator uses a maximum a posteriori (MAP) estimator to generate phase estimates for correlation with incoming data samples and for correlation with mean phases indicative of unique hypothesized signals. The result is a MAP likelihood statistic for each hypothesized transmission, wherein the highest value statistic identifies the transmitted signal.
Attenuation coefficients of soils
International Nuclear Information System (INIS)
Martini, E.; Naziry, M.J.
1989-01-01
As a prerequisite to the interpretation of gamma-spectrometric in situ measurements of activity concentrations of soil radionuclides the attenuation of 60 to 1332 keV gamma radiation by soil samples varying in water content and density has been investigated. A useful empirical equation could be set up to describe the dependence of the mass attenuation coefficient upon photon energy for soil with a mean water content of 10%, with the results comparing well with data in the literature. The mean density of soil in the GDR was estimated at 1.6 g/cm 3 . This value was used to derive the linear attenuation coefficients, their range of variation being 10%. 7 figs., 5 tabs. (author)
Monitoring device for local power peaking coefficients
International Nuclear Information System (INIS)
Mihashi, Ishi
1987-01-01
Purpose: To determine and monitor the local power peaking coefficients by a method not depending on the combination of fuel types. Constitution: Representative values for the local power distribution can be obtained by determining corresponding burn-up degrees based on the burn-up degree of each of fuel assembly segments obtained in a power distribution monitor and by the interpolation and extrapolation of void coefficients. The typical values are multiplied with compensation coefficients for the control rod effect and coefficients for compensating the effect of adjacent fuel assemblies in a calculation device to obtain typical values for the present local power distribution compensated with all of the effects. Further, the calculation device compares them with typical values of the present local power distribution to obtain an aimed local power peaking coefficient as the maximum value thereof. According to the present invention, since the local power peaking coefficients can be determined not depending on the combination of the kind of fuels, if the combination of fuel assemblies is increased upon fuel change, the amount of operation therefor is not increased. (Kamimura, M.)
Monitoring device for local power peaking coefficient
International Nuclear Information System (INIS)
Mitsuhashi, Ishi
1987-01-01
Purpose: To monitor the local power peaking coefficients obtained by the method not depending on the combination of fuel types. Method: A plurality of representative values for the local power distribution determined by the nuclear constant calculation for one fuel assembly are memorized regarding each of the burn-up degree and the void coefficient on every positions and fuel types in fuel rod assemblies. While on the other hand, the representative values for the local power distribution as described above are compensated by a compensation coefficient considering the effect of adjacent segments and a control rod compensation coefficient considering the effect due to the control rod insertion relative to the just-mentioned compensation coefficient. Then, the maximum value among them is selected to determine the local power peaking coefficient at each of the times and each of the segments, which is monitored. According to this system, the calculation and the working required for the fitting work depending on the combination of fuel types are no more required at all to facilitate the maintenance as well. (Horiuchi, T.)
International Nuclear Information System (INIS)
St-Jacques, R.G.; Martel, J.G.; Terreault, B.; Veilleux, G.; Das, S.K.; Kaminsky, M.; Fenske, G.
1976-01-01
The skin thickness of blisters formed on polycrystalline niobium by 4 He + irradiation at room temperature for energies from 15 to 80 keV have been measured. Similar measurements were conducted for 10 keV 4 He + irradiation at 500 0 C to increase blister exfoliation, and thereby allow examination of a larger number of blister skins. For energies smaller than 100 keV the skin thicknesses are compared with the projected range and the damage-energy distributions constructed from moments interpolated from Winterbon's tabulated values. For energies of 10 and 15 keV the projected ranges and damage-energy distributions have also been computed with a Monte Carlo program. For energies larger than 100 keV the projected ranges of 4 He + in Nb were calculated using either Brice's formalism or the one given by Schiott. The thicknesses for 60 and 80 keV, and those reported earlier for 100 to 1500 keV correlate well with calculated projected ranges. For energies lower than 60 keV the measured thicknesses are larger than the calculated ranges
The Truth About Ballistic Coefficients
Courtney, Michael; Courtney, Amy
2007-01-01
The ballistic coefficient of a bullet describes how it slows in flight due to air resistance. This article presents experimental determinations of ballistic coefficients showing that the majority of bullets tested have their previously published ballistic coefficients exaggerated from 5-25% by the bullet manufacturers. These exaggerated ballistic coefficients lead to inaccurate predictions of long range bullet drop, retained energy and wind drift.
International Nuclear Information System (INIS)
Mohsen-Nia, M.; Ebrahimabadi, A.H.; Niknahad, B.
2012-01-01
Highlights: ► n-Octanol/water partition coefficients of propranolol and atenolol were measured. ► The effect of temperature on the partition coefficient was studied. ► The equilibrium data were correlated using the NRTL and UNIQUAC activity models. ► The binary interaction parameters of the activity models were reported. ► It is concluded that propranolol is more hydrophobic than the atenolol at 298.15 K. - Abstract: The n-octanol/water partition coefficients of propranolol and atenolol were experimentally determined by ultraviolet (UV) spectroscopy at T = (298.15, 310.15 and 314.15) K. All measurements were made at the maximum wavelength corresponding to maximum absorption. The results showed that the n-octanol/water partition coefficients of propranolol and atenolol increase with the increase of temperature. The experimental data of this work were also used to examine the phase equilibrium correlating capability of some liquid-phase models. The equilibrium experimental data were correlated using the NRTL and UNIQUAC activity coefficient models and the binary interaction parameters were reported. The average root-mea n-square deviations (RMSD) between the experimental and calculated mass fractions of the (n-octanol + propranolol + water) and (n-octanol + atenolol + water) systems were determined. From the partition coefficients obtained, it is concluded that propranolol (log P ow = 3.12 ± 0.14) is more hydrophobic than the atenolol (log P ow = 0.16 ± 0.01) at T = 298.15 K.
Credal Networks under Maximum Entropy
Lukasiewicz, Thomas
2013-01-01
We apply the principle of maximum entropy to select a unique joint probability distribution from the set of all joint probability distributions specified by a credal network. In detail, we start by showing that the unique joint distribution of a Bayesian tree coincides with the maximum entropy model of its conditional distributions. This result, however, does not hold anymore for general Bayesian networks. We thus present a new kind of maximum entropy models, which are computed sequentially. ...
Dynamical maximum entropy approach to flocking.
Cavagna, Andrea; Giardina, Irene; Ginelli, Francesco; Mora, Thierry; Piovani, Duccio; Tavarone, Raffaele; Walczak, Aleksandra M
2014-04-01
We derive a new method to infer from data the out-of-equilibrium alignment dynamics of collectively moving animal groups, by considering the maximum entropy model distribution consistent with temporal and spatial correlations of flight direction. When bird neighborhoods evolve rapidly, this dynamical inference correctly learns the parameters of the model, while a static one relying only on the spatial correlations fails. When neighbors change slowly and the detailed balance is satisfied, we recover the static procedure. We demonstrate the validity of the method on simulated data. The approach is applicable to other systems of active matter.
Maximum entropy analysis of liquid diffraction data
International Nuclear Information System (INIS)
Root, J.H.; Egelstaff, P.A.; Nickel, B.G.
1986-01-01
A maximum entropy method for reducing truncation effects in the inverse Fourier transform of structure factor, S(q), to pair correlation function, g(r), is described. The advantages and limitations of the method are explored with the PY hard sphere structure factor as model input data. An example using real data on liquid chlorine, is then presented. It is seen that spurious structure is greatly reduced in comparison to traditional Fourier transform methods. (author)
Quantum Non-Markovian Langevin Equations and Transport Coefficients
International Nuclear Information System (INIS)
Sargsyan, V.V.; Antonenko, N.V.; Kanokov, Z.; Adamian, G.G.
2005-01-01
Quantum diffusion equations featuring explicitly time-dependent transport coefficients are derived from generalized non-Markovian Langevin equations. Generalized fluctuation-dissipation relations and analytic expressions for calculating the friction and diffusion coefficients in nuclear processes are obtained. The asymptotic behavior of the transport coefficients and correlation functions for a damped harmonic oscillator that is linearly coupled in momentum to a heat bath is studied. The coupling to a heat bath in momentum is responsible for the appearance of the diffusion coefficient in coordinate. The problem of regression of correlations in quantum dissipative systems is analyzed
Criticality predicts maximum irregularity in recurrent networks of excitatory nodes.
Directory of Open Access Journals (Sweden)
Yahya Karimipanah
Full Text Available A rigorous understanding of brain dynamics and function requires a conceptual bridge between multiple levels of organization, including neural spiking and network-level population activity. Mounting evidence suggests that neural networks of cerebral cortex operate at a critical regime, which is defined as a transition point between two phases of short lasting and chaotic activity. However, despite the fact that criticality brings about certain functional advantages for information processing, its supporting evidence is still far from conclusive, as it has been mostly based on power law scaling of size and durations of cascades of activity. Moreover, to what degree such hypothesis could explain some fundamental features of neural activity is still largely unknown. One of the most prevalent features of cortical activity in vivo is known to be spike irregularity of spike trains, which is measured in terms of the coefficient of variation (CV larger than one. Here, using a minimal computational model of excitatory nodes, we show that irregular spiking (CV > 1 naturally emerges in a recurrent network operating at criticality. More importantly, we show that even at the presence of other sources of spike irregularity, being at criticality maximizes the mean coefficient of variation of neurons, thereby maximizing their spike irregularity. Furthermore, we also show that such a maximized irregularity results in maximum correlation between neuronal firing rates and their corresponding spike irregularity (measured in terms of CV. On the one hand, using a model in the universality class of directed percolation, we propose new hallmarks of criticality at single-unit level, which could be applicable to any network of excitable nodes. On the other hand, given the controversy of the neural criticality hypothesis, we discuss the limitation of this approach to neural systems and to what degree they support the criticality hypothesis in real neural networks. Finally
High accurate volume holographic correlator with 4000 parallel correlation channels
Ni, Kai; Qu, Zongyao; Cao, Liangcai; Su, Ping; He, Qingsheng; Jin, Guofan
2008-03-01
Volume holographic correlator allows simultaneously calculate the two-dimensional inner product between the input image and each stored image. We have recently experimentally implemented in VHC 4000 parallel correlation channels with better than 98% output accuracy in a single location in a crystal. The speckle modulation is used to suppress the sidelobes of the correlation patterns, allowing more correlation spots to be contained in the output plane. A modified exposure schedule is designed to ensure the hologram in each channel with unity diffraction efficiency. In this schedule, a restricted coefficient was introduced into the original exposure schedule to solve the problem that the sensitivity and time constant of the crystal will change as a time function when in high-capacity storage. An interleaving method is proposed to improve the output accuracy. By unifying the distribution of the input and stored image patterns without changing the inner products between them, this method could eliminate the impact of correlation pattern variety on calculated inner product values. Moreover, by using this method, the maximum correlation spot size is reduced, which decreases the required minimum safe clearance between neighboring spots in the output plane, allowing more spots to be parallely detected without crosstalk. The experimental results are given and analyzed.
Maximum entropy prior uncertainty and correlation of statistical economic data
Dias, Rodriques J.F.
2016-01-01
Empirical estimates of source statistical economic data such as trade flows, greenhouse gas emissions or employment figures are always subject to uncertainty (stemming from measurement errors or confidentiality) but information concerning that uncertainty is often missing. This paper uses concepts
Global correlation imaging of magnetic total field gradients
International Nuclear Information System (INIS)
Guo, Lianghui; Meng, Xiaohong; Shi, Lei
2012-01-01
Firstly we introduce the correlation imaging approach for the x-, y- and z-gradients of a magnetic total field anomaly for deriving the distribution of equivalent magnetic sources of the subsurface. In this approach, the subsurface space is divided into a regular grid, and then a correlation coefficient function is computed at each grid node, based on the cross-correlation between the x-gradient (or y-gradient or z-gradient) of the observed magnetic total field anomaly and the x-gradient (or y-gradient or z-gradient) of the theoretical magnetic total field anomaly due to a magnetic dipole. The resultant correlation coefficient is used to describe the probability of a magnetic dipole occurring at the node. We then define a global correlation coefficient function for comprehensively delineating the probability of an occurrence of a magnetic dipole, which takes, at each node, the maximum positive value of the corresponding correlation coefficient function of the three gradients. We finally test the approach both on synthetic data and real data from a metallic deposit area in the middle-lower reaches of the Yangtze River, China. (paper)
Maximum likelihood approach for several stochastic volatility models
International Nuclear Information System (INIS)
Camprodon, Jordi; Perelló, Josep
2012-01-01
Volatility measures the amplitude of price fluctuations. Despite it being one of the most important quantities in finance, volatility is not directly observable. Here we apply a maximum likelihood method which assumes that price and volatility follow a two-dimensional diffusion process where volatility is the stochastic diffusion coefficient of the log-price dynamics. We apply this method to the simplest versions of the expOU, the OU and the Heston stochastic volatility models and we study their performance in terms of the log-price probability, the volatility probability, and its Mean First-Passage Time. The approach has some predictive power on the future returns amplitude by only knowing the current volatility. The assumed models do not consider long-range volatility autocorrelation and the asymmetric return-volatility cross-correlation but the method still yields very naturally these two important stylized facts. We apply the method to different market indices and with a good performance in all cases. (paper)
Heat transfer coefficient in pool boiling for an electrically heated tube at various inclinations
International Nuclear Information System (INIS)
Fahmy, A.S.A.; Mariy, A.H.; Mahmoud, S.I.; Ibrahim, N.A.
1987-01-01
An experimental investigation is carried out study the behaviour of heat transfer in pool boiling from a vertical and inclined heated tube at atmospheric pressure. An imperial correlation joining the different parameters affecting the heat transfer coefficient in pool boiling for an electrically heated tube at various inclinations is developed. Two test sections (zircaloy-4 and stainless steel) of 16 n n outer diameter and 120 nm length are investigated. Four levels of heat flux are used for heating the two lest sections (e.g. 381, 518, 721 and 929 k.watt/n 2). The maximum surface temperature achieved is 146.5 degree c for both materials, and the maximum bulk temperature is 95 degree C. It is found that the average heat transfer coefficient is inversely proportional with heated length l, where it reaches a constant value in the horizontal position. The heat transfer coefficient curves at various inclinations with respect to the heated tube length pass around one point which is defined as limit length
Estimation of rank correlation for clustered data.
Rosner, Bernard; Glynn, Robert J
2017-06-30
It is well known that the sample correlation coefficient (R xy ) is the maximum likelihood estimator of the Pearson correlation (ρ xy ) for independent and identically distributed (i.i.d.) bivariate normal data. However, this is not true for ophthalmologic data where X (e.g., visual acuity) and Y (e.g., visual field) are available for each eye and there is positive intraclass correlation for both X and Y in fellow eyes. In this paper, we provide a regression-based approach for obtaining the maximum likelihood estimator of ρ xy for clustered data, which can be implemented using standard mixed effects model software. This method is also extended to allow for estimation of partial correlation by controlling both X and Y for a vector U_ of other covariates. In addition, these methods can be extended to allow for estimation of rank correlation for clustered data by (i) converting ranks of both X and Y to the probit scale, (ii) estimating the Pearson correlation between probit scores for X and Y, and (iii) using the relationship between Pearson and rank correlation for bivariate normally distributed data. The validity of the methods in finite-sized samples is supported by simulation studies. Finally, two examples from ophthalmology and analgesic abuse are used to illustrate the methods. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.
Kubo Formulas for Second-Order Hydrodynamic Coefficients
International Nuclear Information System (INIS)
Moore, Guy D.; Sohrabi, Kiyoumars A.
2011-01-01
At second order in gradients, conformal relativistic hydrodynamics depends on the viscosity η and on five additional ''second-order'' hydrodynamical coefficients τ Π , κ, λ 1 , λ 2 , and λ 3 . We derive Kubo relations for these coefficients, relating them to equilibrium, fully retarded three-point correlation functions of the stress tensor. We show that the coefficient λ 3 can be evaluated directly by Euclidean means and does not in general vanish.
Encoding Strategy for Maximum Noise Tolerance Bidirectional Associative Memory
National Research Council Canada - National Science Library
Shen, Dan
2003-01-01
In this paper, the Basic Bidirectional Associative Memory (BAM) is extended by choosing weights in the correlation matrix, for a given set of training pairs, which result in a maximum noise tolerance set for BAM...
Lattice cell diffusion coefficients. Definitions and comparisons
International Nuclear Information System (INIS)
Hughes, R.P.
1980-01-01
Definitions of equivalent diffusion coefficients for regular lattices of heterogeneous cells have been given by several authors. The paper begins by reviewing these different definitions and the unification of their derivation. This unification makes clear how accurately each definition (together with appropriate cross-section definitions to preserve the eigenvalue) represents the individual reaction rates within the cell. The approach can be extended to include asymmetric cells and whereas before, the buckling describing the macroscopic flux shape was real, here it is found to be complex. A neutron ''drift'' coefficient as well as a diffusion coefficient is necessary to produce the macroscopic flux shape. The numerical calculation of the various different diffusion coefficients requires the solutions of equations similar to the ordinary transport equation for an infinite lattice. Traditional reactor physics codes are not sufficiently flexible to solve these equations in general. However, calculations in certain simple cases are presented and the theoretical results quantified. In difficult geometries, Monte Carlo techniques can be used to calculate an effective diffusion coefficient. These methods relate to those already described provided that correlation effects between different generations of neutrons are included. Again, these effects are quantified in certain simple cases. (author)
Mayer coefficients in two-dimensional Coulomb systems
International Nuclear Information System (INIS)
Speer, E.R.
1986-01-01
It is shown that, for neutral systems of particles of arbitrary charges in two dimensions, with hard cores, coefficients of the Mayer series for the pressure exist in the thermodynamic limit below certain thresholds in the temperature. The methods used here apply also to correlation functions and yield bounds on the asymptotic behavior of their Mayer coefficients
Determining Composite Validity Coefficients for Army Jobs and Job Families
National Research Council Canada - National Science Library
Zeidner, Joseph
2002-01-01
.... These correlation coefficients are corrected, first, for unreliability of the criterion and, then, for restriction in range effects due to assignment from an Army input population to MOS samples...
Maximum Entropy in Drug Discovery
Directory of Open Access Journals (Sweden)
Chih-Yuan Tseng
2014-07-01
Full Text Available Drug discovery applies multidisciplinary approaches either experimentally, computationally or both ways to identify lead compounds to treat various diseases. While conventional approaches have yielded many US Food and Drug Administration (FDA-approved drugs, researchers continue investigating and designing better approaches to increase the success rate in the discovery process. In this article, we provide an overview of the current strategies and point out where and how the method of maximum entropy has been introduced in this area. The maximum entropy principle has its root in thermodynamics, yet since Jaynes’ pioneering work in the 1950s, the maximum entropy principle has not only been used as a physics law, but also as a reasoning tool that allows us to process information in hand with the least bias. Its applicability in various disciplines has been abundantly demonstrated. We give several examples of applications of maximum entropy in different stages of drug discovery. Finally, we discuss a promising new direction in drug discovery that is likely to hinge on the ways of utilizing maximum entropy.
Overview of models allowing calculation of activity coefficients
Energy Technology Data Exchange (ETDEWEB)
Jaussaud, C.; Sorel, C
2004-07-01
Activity coefficients must be estimated to accurately quantify the extraction equilibrium involved in spent fuel reprocessing. For these calculations, binary data are required for each electrolyte over a concentration range sometimes exceeding the maximum solubility. The activity coefficients must be extrapolated to model the behavior of binary supersaturated aqueous solution. According to the bibliography, the most suitable models are based on the local composition concept. (authors)
Quadrature formulas for Fourier coefficients
Bojanov, Borislav
2009-09-01
We consider quadrature formulas of high degree of precision for the computation of the Fourier coefficients in expansions of functions with respect to a system of orthogonal polynomials. In particular, we show the uniqueness of a multiple node formula for the Fourier-Tchebycheff coefficients given by Micchelli and Sharma and construct new Gaussian formulas for the Fourier coefficients of a function, based on the values of the function and its derivatives. © 2009 Elsevier B.V. All rights reserved.
Coefficient Alpha: A Reliability Coefficient for the 21st Century?
Yang, Yanyun; Green, Samuel B.
2011-01-01
Coefficient alpha is almost universally applied to assess reliability of scales in psychology. We argue that researchers should consider alternatives to coefficient alpha. Our preference is for structural equation modeling (SEM) estimates of reliability because they are informative and allow for an empirical evaluation of the assumptions…
Coefficient estimates of negative powers and inverse coefficients for ...
Indian Academy of Sciences (India)
and the inequality is sharp for the inverse of the Koebe function k(z) = z/(1 − z)2. An alternative approach to the inverse coefficient problem for functions in the class S has been investigated by Schaeffer and Spencer [27] and FitzGerald [6]. Although, the inverse coefficient problem for the class S has been completely solved ...
Measuring of heat transfer coefficient
DEFF Research Database (Denmark)
Henningsen, Poul; Lindegren, Maria
Subtask 3.4 Measuring of heat transfer coefficient Subtask 3.4.1 Design and setting up of tests to measure heat transfer coefficient Objective: Complementary testing methods together with the relevant experimental equipment are to be designed by the two partners involved in order to measure...... the heat transfer coefficient for a wide range of interface conditions in hot and warm forging processes. Subtask 3.4.2 Measurement of heat transfer coefficient The objective of subtask 3.4.2 is to determine heat transfer values for different interface conditions reflecting those typically operating in hot...
Maximum stellar iron core mass
Indian Academy of Sciences (India)
60, No. 3. — journal of. March 2003 physics pp. 415–422. Maximum stellar iron core mass. F W GIACOBBE. Chicago Research Center/American Air Liquide ... iron core compression due to the weight of non-ferrous matter overlying the iron cores within large .... thermal equilibrium velocities will tend to be non-relativistic.
Maximum entropy beam diagnostic tomography
International Nuclear Information System (INIS)
Mottershead, C.T.
1985-01-01
This paper reviews the formalism of maximum entropy beam diagnostic tomography as applied to the Fusion Materials Irradiation Test (FMIT) prototype accelerator. The same formalism has also been used with streak camera data to produce an ultrahigh speed movie of the beam profile of the Experimental Test Accelerator (ETA) at Livermore. 11 refs., 4 figs
Maximum entropy beam diagnostic tomography
International Nuclear Information System (INIS)
Mottershead, C.T.
1985-01-01
This paper reviews the formalism of maximum entropy beam diagnostic tomography as applied to the Fusion Materials Irradiation Test (FMIT) prototype accelerator. The same formalism has also been used with streak camera data to produce an ultrahigh speed movie of the beam profile of the Experimental Test Accelerator (ETA) at Livermore
A portable storage maximum thermometer
International Nuclear Information System (INIS)
Fayart, Gerard.
1976-01-01
A clinical thermometer storing the voltage corresponding to the maximum temperature in an analog memory is described. End of the measurement is shown by a lamp switch out. The measurement time is shortened by means of a low thermal inertia platinum probe. This portable thermometer is fitted with cell test and calibration system [fr
Neutron spectra unfolding with maximum entropy and maximum likelihood
International Nuclear Information System (INIS)
Itoh, Shikoh; Tsunoda, Toshiharu
1989-01-01
A new unfolding theory has been established on the basis of the maximum entropy principle and the maximum likelihood method. This theory correctly embodies the Poisson statistics of neutron detection, and always brings a positive solution over the whole energy range. Moreover, the theory unifies both problems of overdetermined and of underdetermined. For the latter, the ambiguity in assigning a prior probability, i.e. the initial guess in the Bayesian sense, has become extinct by virtue of the principle. An approximate expression of the covariance matrix for the resultant spectra is also presented. An efficient algorithm to solve the nonlinear system, which appears in the present study, has been established. Results of computer simulation showed the effectiveness of the present theory. (author)
Parametric optimization of thermoelectric elements footprint for maximum power generation
DEFF Research Database (Denmark)
Rezania, A.; Rosendahl, Lasse; Yin, Hao
2014-01-01
The development studies in thermoelectric generator (TEG) systems are mostly disconnected to parametric optimization of the module components. In this study, optimum footprint ratio of n- and p-type thermoelectric (TE) elements is explored to achieve maximum power generation, maximum cost......-performance, and variation of efficiency in the uni-couple over a wide range of the heat transfer coefficient on the cold junction. The three-dimensional (3D) governing equations of the thermoelectricity and the heat transfer are solved using the finite element method (FEM) for temperature dependent properties of TE...... materials. The results, which are in good agreement with the previous computational studies, show that the maximum power generation and the maximum cost-performance in the module occur at An/Ap
Sabine absorption coefficients to random incidence absorption coefficients
DEFF Research Database (Denmark)
Jeong, Cheol-Ho
2014-01-01
into random incidence absorption coefficients for porous absorbers are investigated. Two optimization-based conversion methods are suggested: the surface impedance estimation for locally reacting absorbers and the flow resistivity estimation for extendedly reacting absorbers. The suggested conversion methods...
On Maximum Entropy and Inference
Directory of Open Access Journals (Sweden)
Luigi Gresele
2017-11-01
Full Text Available Maximum entropy is a powerful concept that entails a sharp separation between relevant and irrelevant variables. It is typically invoked in inference, once an assumption is made on what the relevant variables are, in order to estimate a model from data, that affords predictions on all other (dependent variables. Conversely, maximum entropy can be invoked to retrieve the relevant variables (sufficient statistics directly from the data, once a model is identified by Bayesian model selection. We explore this approach in the case of spin models with interactions of arbitrary order, and we discuss how relevant interactions can be inferred. In this perspective, the dimensionality of the inference problem is not set by the number of parameters in the model, but by the frequency distribution of the data. We illustrate the method showing its ability to recover the correct model in a few prototype cases and discuss its application on a real dataset.
Maximum Water Hammer Sensitivity Analysis
Jalil Emadi; Abbas Solemani
2011-01-01
Pressure waves and Water Hammer occur in a pumping system when valves are closed or opened suddenly or in the case of sudden failure of pumps. Determination of maximum water hammer is considered one of the most important technical and economical items of which engineers and designers of pumping stations and conveyance pipelines should take care. Hammer Software is a recent application used to simulate water hammer. The present study focuses on determining significance of ...
Directory of Open Access Journals (Sweden)
Yunfeng Shan
2008-01-01
Full Text Available Genomes and genes diversify during evolution; however, it is unclear to what extent genes still retain the relationship among species. Model species for molecular phylogenetic studies include yeasts and viruses whose genomes were sequenced as well as plants that have the fossil-supported true phylogenetic trees available. In this study, we generated single gene trees of seven yeast species as well as single gene trees of nine baculovirus species using all the orthologous genes among the species compared. Homologous genes among seven known plants were used for validation of the ﬁnding. Four algorithms—maximum parsimony (MP, minimum evolution (ME, maximum likelihood (ML, and neighbor-joining (NJ—were used. Trees were reconstructed before and after weighting the DNA and protein sequence lengths among genes. Rarely a gene can always generate the “true tree” by all the four algorithms. However, the most frequent gene tree, termed “maximum gene-support tree” (MGS tree, or WMGS tree for the weighted one, in yeasts, baculoviruses, or plants was consistently found to be the “true tree” among the species. The results provide insights into the overall degree of divergence of orthologous genes of the genomes analyzed and suggest the following: 1 The true tree relationship among the species studied is still maintained by the largest group of orthologous genes; 2 There are usually more orthologous genes with higher similarities between genetically closer species than between genetically more distant ones; and 3 The maximum gene-support tree reﬂects the phylogenetic relationship among species in comparison.
Water Use and Crop Coefficients in Sprinkler Irrigated Rice
Directory of Open Access Journals (Sweden)
Antonino Spanu
Full Text Available Field experiments were carried out during the years 2002, 2004, 2005 and 2006 to analyze water-soil-atmosphere interactions in sprinkler irrigated rice. The research was carried out in Sardinia (39º 59’ N; 8º 40’ E, at altitude 15 m. The cultivars used in the experiments, respectively in 2002 and in 2004-2005-2006, were Irat 212 and Eurosis. In each year cultivars were subjected to the same crop management. Irrigation was applied since the emergence with the sprinkler method, taking into account the loss of water from ‘Class A’ pan evaporation. Soil water content was monitored at 0.10 m intervals until 1.00-m depth using a ‘Diviner 2000’ (Sentek. In 2002 seven irrigation scheduling treatments were compared. In 2004, 2005, 2006 irrigation treatments provided for optimal soil water conditions during the growing season. In 2002 the results highlighted: 1 0-0.20 m depth was the most important layer for crop water uptake and the best correlated layer with rice rough yield; 2 the positive relationship between yield and water supply was significant until 6500 m3 ha-1 of water applied. Further seasonal irrigation volumes did not increase significantly yield. In 2004, 2005 and 2006 the analysis of the soil water balance at different crop phenological stages allowed to estimate crop coefficients (Kc using the Penman-Monteith equation and the ‘Class A’ pan evaporation (Kcev. Kc varied over the three-year period on average from 0.90 to 1.07 and 0.97, respectively for the emergence-end of tillering, end of tillering-heading and heading-maturing periods, while crop coefficients as a ratio between maximum crop evapotranspiration (ETc and Epan, Kcev ranged from 0.78 to 0.92 and 0.81 for the same time periods.
LCLS Maximum Credible Beam Power
International Nuclear Information System (INIS)
Clendenin, J.
2005-01-01
The maximum credible beam power is defined as the highest credible average beam power that the accelerator can deliver to the point in question, given the laws of physics, the beam line design, and assuming all protection devices have failed. For a new accelerator project, the official maximum credible beam power is determined by project staff in consultation with the Radiation Physics Department, after examining the arguments and evidence presented by the appropriate accelerator physicist(s) and beam line engineers. The definitive parameter becomes part of the project's safety envelope. This technical note will first review the studies that were done for the Gun Test Facility (GTF) at SSRL, where a photoinjector similar to the one proposed for the LCLS is being tested. In Section 3 the maximum charge out of the gun for a single rf pulse is calculated. In Section 4, PARMELA simulations are used to track the beam from the gun to the end of the photoinjector. Finally in Section 5 the beam through the matching section and injected into Linac-1 is discussed
Han, Xu; Suo, Shiteng; Sun, Yawen; Zu, Jinyan; Qu, Jianxun; Zhou, Yan; Chen, Zengai; Xu, Jianrong
2017-03-01
To compare four methods of region-of-interest (ROI) placement for apparent diffusion coefficient (ADC) measurements in distinguishing low-grade gliomas (LGGs) from high-grade gliomas (HGGs). Two independent readers measured ADC parameters using four ROI methods (single-slice [single-round, five-round and freehand] and whole-volume) on 43 patients (20 LGGs, 23 HGGs) who had undergone 3.0 Tesla diffusion-weighted imaging and time required for each method of ADC measurements was recorded. Intraclass correlation coefficients (ICCs) were used to assess interobserver variability of ADC measurements. Mean and minimum ADC values and time required were compared using paired Student's t-tests. All ADC parameters (mean/minimum ADC values of three single-slice methods, mean/minimum/standard deviation/skewness/kurtosis/the10 th and 25 th percentiles/median/maximum of whole-volume method) were correlated with tumor grade (low versus high) by unpaired Student's t-tests. Discriminative ability was determined by receiver operating characteristic curves. All ADC measurements except minimum, skewness, and kurtosis of whole-volume ROI differed significantly between LGGs and HGGs (all P determination methods. Whole-volume histogram analysis did not yield better results than single-slice methods and took longer. Mean ADC value derived from single-round ROI is the most optimal parameter for differentiating LGGs from HGGs. 3 J. Magn. Reson. Imaging 2017;45:722-730. © 2016 International Society for Magnetic Resonance in Medicine.
Correlation and path coefficient analysis of yield and agronomic ...
African Journals Online (AJOL)
STORAGESEVER
2010-05-03
May 3, 2010 ... 1Department of Biological Sciences, Fountain University, Osogbo, Osun State, Nigeria. ... on maize (Zea mays L.) at the University of Ilorin Teaching and Research ... great value in the evaluation of the most effective.
correlation studies and path coefficient analysis for seed yield
African Journals Online (AJOL)
Prof. Adipala Ekwamu
African Crop Science Journal, Vol. 21, No. 1, pp. 51 - 59 ... Yield being a quantitative trait has complex inheritance, which is ... Analysis for seed yield and yield components in Ethiopian coriander. 53 ..... The financial assistance of Canadian.
A new consensus measure based on Pearson correlation coefficient
Chiclana, Francisco; Gonzalez-Arteaga, Teresa; de Andres Calle, Rocio
2016-01-01
Obtaining consensual solutions is an important issue in decision making processes. It depends on several factors such as experts’ opinions, principles, knowledge, experience, etc. In the literature we can find a considerable amount of consensus measurement from different research areas (from a Social Choice perspective: Alcalde-Unzu and Vorsatz [1], Alcantud, de Andres Calle and Cascon [2] and Bosch [3], among others and from Decision Making Theory: Gonzalez-Arteaga, Alcantud and ...
correlation and path coefficient analysis of yield characters of bambara
African Journals Online (AJOL)
Finance DAC
1Adamawa State College of Agriculture, Ganye, Nigeria. ... seed yield (39.872%) followed by number of pods/plant which contributed 12.809%. ... Therefore, the most important yield determinants of bambara groundnut which should be.
Probabilistic optimization of safety coefficients
International Nuclear Information System (INIS)
Marques, M.; Devictor, N.; Magistris, F. de
1999-01-01
This article describes a reliability-based method for the optimization of safety coefficients defined and used in design codes. The purpose of the optimization is to determine the partial safety coefficients which minimize an objective function for sets of components and loading situations covered by a design rule. This objective function is a sum of distances between the reliability of the components designed using the safety coefficients and a target reliability. The advantage of this method is shown on the examples of the reactor vessel, a vapour pipe and the safety injection circuit. (authors)
Diffusion coefficient calculations for cylindrical cells
International Nuclear Information System (INIS)
Lam-Hime, M.
1983-03-01
An accurate and general diffusion coefficient calculation for cylindrical cells is described using isotropic scattering integral transport theory. This method has been particularly applied to large regular lattices of graphite-moderated reactors with annular coolant channels. The cells are divided into homogeneous zones, and a zone-wise flux expansion is used to formulate a collision probability problem. The reflection of neutrons at the cell boundary is accounted for by the conservation of the neutron momentum. The uncorrected diffusion coefficient Benoist's definition is used, and the described formulation does not neglect any effect. Angular correlation terms, energy coupling non-uniformity and anisotropy of the classical flux are exactly taken into account. Results for gas-graphite typical cells are given showing the importance of these approximations
International Nuclear Information System (INIS)
Ferguson, A.J.
1974-01-01
An outline of the theory of angular correlations is presented, and the difference between the modern density matrix method and the traditional wave function method is stressed. Comments are offered on particular angular correlation theoretical techniques. A brief discussion is given of recent studies of gamma ray angular correlations of reaction products recoiling with high velocity into vacuum. Two methods for optimization to obtain the most accurate expansion coefficients of the correlation are discussed. (1 figure, 53 references) (U.S.)
Quadrature formulas for Fourier coefficients
Bojanov, Borislav; Petrova, Guergana
2009-01-01
We consider quadrature formulas of high degree of precision for the computation of the Fourier coefficients in expansions of functions with respect to a system of orthogonal polynomials. In particular, we show the uniqueness of a multiple node
Diffusion coefficient for anomalous transport
International Nuclear Information System (INIS)
1986-01-01
A report on the progress towards the goal of estimating the diffusion coefficient for anomalous transport is given. The gyrokinetic theory is used to identify different time and length scale inherent to the characteristics of plasmas which exhibit anomalous transport
What to Do With "Moderate" Reliability and Validity Coefficients?
Post, Marcel W
Clinimetric studies may use criteria for test-retest reliability and convergent validity such that correlation coefficients as low as .40 are supportive of reliability and validity. It can be argued that moderate (.40-.60) correlations should not be interpreted in this way and that reliability
Fuel Temperature Coefficient of Reactivity
Energy Technology Data Exchange (ETDEWEB)
Loewe, W.E.
2001-07-31
A method for measuring the fuel temperature coefficient of reactivity in a heterogeneous nuclear reactor is presented. The method, which is used during normal operation, requires that calibrated control rods be oscillated in a special way at a high reactor power level. The value of the fuel temperature coefficient of reactivity is found from the measured flux responses to these oscillations. Application of the method in a Savannah River reactor charged with natural uranium is discussed.
Properties of Traffic Risk Coefficient
Tang, Tie-Qiao; Huang, Hai-Jun; Shang, Hua-Yan; Xue, Yu
2009-10-01
We use the model with the consideration of the traffic interruption probability (Physica A 387(2008)6845) to study the relationship between the traffic risk coefficient and the traffic interruption probability. The analytical and numerical results show that the traffic interruption probability will reduce the traffic risk coefficient and that the reduction is related to the density, which shows that this model can improve traffic security.
Amide temperature coefficients in the protein G B1 domain
International Nuclear Information System (INIS)
Tomlinson, Jennifer H.; Williamson, Mike P.
2012-01-01
Temperature coefficients have been measured for backbone amide 1 H and 15 N nuclei in the B1 domain of protein G (GB1), using temperatures in the range 283–313 K, and pH values from 2.0 to 9.0. Many nuclei display pH-dependent coefficients, which were fitted to one or two pK a values. 1 H coefficients showed the expected behaviour, in that hydrogen-bonded amides have less negative values, but for those amides involved in strong hydrogen bonds in regular secondary structure there is a negative correlation between strength of hydrogen bond and size of temperature coefficient. The best correlation to temperature coefficient is with secondary shift, indicative of a very approximately uniform thermal expansion. The largest pH-dependent changes in coefficient are for amides in loops adjacent to sidechain hydrogen bonds rather than the amides involved directly in hydrogen bonds, indicating that the biggest determinant of the temperature coefficient is temperature-dependent loss of structure, not hydrogen bonding. Amide 15 N coefficients have no clear relationship with structure.
Generic maximum likely scale selection
DEFF Research Database (Denmark)
Pedersen, Kim Steenstrup; Loog, Marco; Markussen, Bo
2007-01-01
in this work is on applying this selection principle under a Brownian image model. This image model provides a simple scale invariant prior for natural images and we provide illustrative examples of the behavior of our scale estimation on such images. In these illustrative examples, estimation is based......The fundamental problem of local scale selection is addressed by means of a novel principle, which is based on maximum likelihood estimation. The principle is generally applicable to a broad variety of image models and descriptors, and provides a generic scale estimation methodology. The focus...
RELIABILITY OF THE ONE REPETITION-MAXIMUM POWER CLEAN TEST IN ADOLESCENT ATHLETES
Faigenbaum, Avery D.; McFarland, James E.; Herman, Robert; Naclerio, Fernando; Ratamess, Nicholas A.; Kang, Jie; Myer, Gregory D.
2013-01-01
Although the power clean test is routinely used to assess strength and power performance in adult athletes, the reliability of this measure in younger populations has not been examined. Therefore, the purpose of this study was to determine the reliability of the one repetition maximum (1 RM) power clean in adolescent athletes. Thirty-six male athletes (age 15.9 ± 1.1 yrs, body mass 79.1 ± 20.3 kg, height 175.1 ±7.4 cm) who had more than 1 year of training experience with weightlifting exercises performed a 1 RM power clean on two nonconsecutive days in the afternoon following standardized procedures. All test procedures were supervised by a senior level weightlifting coach and consisted of a systematic progression in test load until the maximum resistance that could be lifted for one repetition using proper exercise technique was determined. Data were analyzed using an intraclass correlation coefficient (ICC [2,k]), Pearson correlation coefficient (r), repeated measures ANOVA, Bland-Altman plot, and typical error analyses. Analysis of the data revealed that the test measures were highly reliable demonstrating a test-retest ICC of 0.98 (95% CI = 0.96–0.99). Testing also demonstrated a strong relationship between 1 RM measures on trial 1 and trial 2 (r=0.98, pinjuries occurred during the study period and the testing protocol was well-tolerated by all subjects. These findings indicate that 1 RM power clean testing has a high degree of reproducibility in trained male adolescent athletes when standardized testing procedures are followed and qualified instruction is present. PMID:22233786
Optimizing the maximum reported cluster size in the spatial scan statistic for ordinal data.
Kim, Sehwi; Jung, Inkyung
2017-01-01
The spatial scan statistic is an important tool for spatial cluster detection. There have been numerous studies on scanning window shapes. However, little research has been done on the maximum scanning window size or maximum reported cluster size. Recently, Han et al. proposed to use the Gini coefficient to optimize the maximum reported cluster size. However, the method has been developed and evaluated only for the Poisson model. We adopt the Gini coefficient to be applicable to the spatial scan statistic for ordinal data to determine the optimal maximum reported cluster size. Through a simulation study and application to a real data example, we evaluate the performance of the proposed approach. With some sophisticated modification, the Gini coefficient can be effectively employed for the ordinal model. The Gini coefficient most often picked the optimal maximum reported cluster sizes that were the same as or smaller than the true cluster sizes with very high accuracy. It seems that we can obtain a more refined collection of clusters by using the Gini coefficient. The Gini coefficient developed specifically for the ordinal model can be useful for optimizing the maximum reported cluster size for ordinal data and helpful for properly and informatively discovering cluster patterns.