An Aqueous Extract of Marine Microalgae Exhibits Antimetastatic Activity through Preferential Killing of Suspended Cancer Cells and Anticolony Forming Activity

Science.gov (United States)

Somasekharan, Syam Prakash; El-Naggar, Amal; Sorensen, Poul H.

2016-01-01

Research on marine natural products as potential anticancer agents is still limited. In the present study, an aqueous extract of a Canadian marine microalgal preparation was assessed for anticancer activities using various assays and cell lines of human cancers, including lung, prostate, stomach, breast, and pancreatic cancers, as well as an osteosarcoma. In vitro, the microalgal extract exhibited marked anticolony forming activity. In addition, it was more toxic, as indicated by increased apoptosis, to nonadherent cells (grown in suspension) than to adherent cells. In vivo, an antimetastatic effect of the extract was observed in NOD-SCID mice carrying subrenal capsule xenografts of PC3 prostate cancer cells. The results of the present study suggest that the antimetastatic effect of the aqueous microalgal extract is based on inhibition of colony forming ability of cancer cells and the preferential killing of suspended cancer cells. Further research aimed at identification of the molecular basis of the anticancer activities of the microalgal extract appears to be warranted. PMID:27656243

An Aqueous Extract of Marine Microalgae Exhibits Antimetastatic Activity through Preferential Killing of Suspended Cancer Cells and Anticolony Forming Activity

Directory of Open Access Journals (Sweden)

Syam Prakash Somasekharan

2016-01-01

Full Text Available Research on marine natural products as potential anticancer agents is still limited. In the present study, an aqueous extract of a Canadian marine microalgal preparation was assessed for anticancer activities using various assays and cell lines of human cancers, including lung, prostate, stomach, breast, and pancreatic cancers, as well as an osteosarcoma. In vitro, the microalgal extract exhibited marked anticolony forming activity. In addition, it was more toxic, as indicated by increased apoptosis, to nonadherent cells (grown in suspension than to adherent cells. In vivo, an antimetastatic effect of the extract was observed in NOD-SCID mice carrying subrenal capsule xenografts of PC3 prostate cancer cells. The results of the present study suggest that the antimetastatic effect of the aqueous microalgal extract is based on inhibition of colony forming ability of cancer cells and the preferential killing of suspended cancer cells. Further research aimed at identification of the molecular basis of the anticancer activities of the microalgal extract appears to be warranted.

Microalgal Culture Collection Transfers

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The Milford Microalgal culture Collection holds over 200 live cultures representing 13 classes of of algae. The cultures are maintained in three different growing...

Microalgal lipids biochemistry and biotechnological perspectives.

Science.gov (United States)

Bellou, Stamatia; Baeshen, Mohammed N; Elazzazy, Ahmed M; Aggeli, Dimitra; Sayegh, Fotoon; Aggelis, George

2014-12-01

In the last few years, there has been an intense interest in using microalgal lipids in food, chemical and pharmaceutical industries and cosmetology, while a noteworthy research has been performed focusing on all aspects of microalgal lipid production. This includes basic research on the pathways of solar energy conversion and on lipid biosynthesis and catabolism, and applied research dealing with the various biological and technical bottlenecks of the lipid production process. In here, we review the current knowledge in microalgal lipids with respect to their metabolism and various biotechnological applications, and we discuss potential future perspectives. The committing step in fatty acid biosynthesis is the carboxylation of acetyl-CoA to form malonyl-CoA that is then introduced in the fatty acid synthesis cycle leading to the formation of palmitic and stearic acids. Oleic acid may also be synthesized after stearic acid desaturation while further conversions of the fatty acids (i.e. desaturations, elongations) occur after their esterification with structural lipids of both plastids and the endoplasmic reticulum. The aliphatic chains are also used as building blocks for structuring storage acylglycerols via the Kennedy pathway. Current research, aiming to enhance lipogenesis in the microalgal cell, is focusing on over-expressing key-enzymes involved in the earlier steps of the pathway of fatty acid synthesis. A complementary plan would be the repression of lipid catabolism by down-regulating acylglycerol hydrolysis and/or β-oxidation. The tendency of oleaginous microalgae to synthesize, apart from lipids, significant amounts of other energy-rich compounds such as sugars, in processes competitive to lipogenesis, deserves attention since the lipid yield may be considerably increased by blocking competitive metabolic pathways. The majority of microalgal production occurs in outdoor cultivation and for this reason biotechnological applications face some difficulties

An experimental investigation of microalgal dewatering efficiency of belt filter system

Directory of Open Access Journals (Sweden)

Anjali Sandip

2015-11-01

Full Text Available The objective of this study was to investigate the microalgal dewatering efficiency of a belt filter system for feed concentrations below 10 g dry wt./L. A prototype belt filtration system designed for 50 g dry wt./L microalgal feed concentration was used for this investigation. The highest concentration of microalgal suspension available for testing on the prototype belt filtration system was 6 g dry wt./L obtained from biomass settling tanks at the Lawrence, Kansas domestic wastewater treatment plant. For preparation of feed suspension with concentrations below 10 g dry wt./L, microalgal cultivation was followed by flocculation. A mixed laboratory culture of freshwater species dominated by three eukaryotic green microalgae (Chlorella vulgaris, Scenedesmus sp., and Kirchneriella sp. was cultivated in wastewater effluent. This was followed by flocculation which resulted in a microalgal feed suspension concentration of 4 g dry wt./L. Belt dewatering tests were conducted on microalgal suspensions with feed concentrations of 4 g dry wt./L and 6 g dry wt./L. The maximum microalgal recovery with the belt dewatering system was 46% from the 4 g dry wt./L, and 84% from the 6 g dry wt./L suspensions respectively. The results of this study indicate that microalgal suspension concentrations as low as 6 g dry wt./L can be recovered with a belt filter system improving the overall dewatering efficiency of the system.

Biomass and Neutral Lipid Production in Geothermal Microalgal Consortia

Science.gov (United States)

Bywaters, Kathryn F.; Fritsen, Christian H.

2015-01-01

Recently, technologies have been developed that offer the possibility of using algal biomass as feedstocks to energy producing systems – in addition to oil-derived fuels (Bird et al., 2011, 2012). Growing native mixed microalgal consortia for biomass in association with geothermal resources has the potential to mitigate negative impacts of seasonally low temperatures on biomass production systems as well as mitigate some of the challenges associated with growing unialgal strains. We assessed community composition, growth rates, biomass, and neutral lipid production of microalgal consortia obtained from geothermal hot springs in the Great Basin/Nevada area that were cultured under different thermal and light conditions. Biomass production rates ranged from 39.0 to 344.1 mg C L−1 day−1. The neutral lipid production in these consortia with and without shifts to lower temperatures and additions of bicarbonate (both environmental parameters that have been shown to enhance neutral lipid production) ranged from 0 to 38.74 mg free fatty acids (FFA) and triacylglycerols (TAG) L−1 day−1; the upper value was approximately 6% of the biomass produced. The higher lipid values were most likely due to the presence of Achnanthidium sp. Palmitic and stearic acids were the dominant free fatty acids. The S/U ratio (the saturated to unsaturated FA ratio) decreased for cultures shifted from their original temperature to 15°C. Biomass production was within the upper limits of those reported for individual strains, and production of neutral lipids was increased with secondary treatment. All results demonstrate a potential of culturing and manipulating resultant microalgal consortia for biomass-based energy production and perhaps even for biofuels. PMID:25763368

Biomass and Neutral Lipid Production in Geothermal Microalgal Consortia

Directory of Open Access Journals (Sweden)

Kathryn Faye Bywaters

2015-02-01

Full Text Available Recently, technologies have been developed that offer the possibility of using algal biomass as feedstocks to energy producing systems- in addition to oil-derived fuels (Bird et al., 2011;Bird et al., 2012. Growing native mixed microalgal consortia for biomass in association with geothermal resources has the potential to mitigate negative impacts of seasonally low temperatures on biomass production systems as well as mitigate some of the challenges associated with growing unialgal strains. We assessed community composition, growth rates, biomass and neutral lipid production of microalgal consortia obtained from geothermal hot springs in the Great Basin/Nevada area that were cultured under different thermal and light conditions. Biomass production rates ranged from 368 to 3246 mg C L-1 d-1. The neutral lipid production in these consortia with and without shifts to lower temperatures and additions of bicarbonate (both environmental parameters that have been shown to enhance neutral lipid production ranged from zero to 38.74 mg free fatty acids and triacylglycerols L-1 d-1, the upper value was approximately 6% of the biomass produced. The higher lipid values were most likely due to the presence of Achnanthidium sp. Palmitic and stearic acids were the dominant free fatty acids. The S/U ratio (the saturated to unsaturated FA ratio decreased for cultures shifted from their original temperature to 15°C. Biomass production was within the upper limits of those reported for individual strains, and production of neutral lipids was increased with secondary treatment – all results demonstrate a potential of culturing and manipulating resultant microalgal consortia for biomass-based energy production and perhaps even for biofuels.

Cell disruption and lipid extraction for microalgal biorefineries: A review.

Science.gov (United States)

Lee, Soo Youn; Cho, Jun Muk; Chang, Yong Keun; Oh, You-Kwan

2017-11-01

The microalgae-based biorefinement process has attracted much attention from academic and industrial researchers attracted to its biofuel, food and nutraceutical applications. In this paper, recent developments in cell-disruption and lipid-extraction methods, focusing on four biotechnologically important microalgal species (namely, Chlamydomonas, Haematococcus, Chlorella, and Nannochloropsis spp.), are reviewed. The structural diversity and rigidity of microalgal cell walls complicate the development of efficient downstream processing methods for cell-disruption and subsequent recovery of intracellular lipid and pigment components. Various mechanical, chemical and biological cell-disruption methods are discussed in detail and compared based on microalgal species and status (wet/dried), scale, energy consumption, efficiency, solvent extraction, and synergistic combinations. The challenges and prospects of the downstream processes for the future development of eco-friendly and economical microalgal biorefineries also are outlined herein. Copyright © 2017 Elsevier Ltd. All rights reserved.

Modeling of microalgal metabolism

NARCIS (Netherlands)

Kliphuis, A.M.J.

2010-01-01

Microalgae are a potential source for a wide range of products, such as carotenoids, lipids, hydrogen, protein and starch, which are of interest for food, feed and biofuel applications. Maximization of microalgal product and biomass productivity in (large-scale) outdoor photobioreactors is important

Preliminary study on the dye removal efficacy of immobilized marine ...

African Journals Online (AJOL)

Preliminary study on the dye removal efficacy of immobilized marine and freshwater microalgal beads from textile wastewater. SD Kumar, P Santhanam, R Nandakumar, S Anath, B Balaji Prasath, A Shenbaga Devi, S Jeyanthi, T Jayalakshima, P Ananthi ...

Microalgal production--a close look at the economics.

Science.gov (United States)

Norsker, Niels-Henrik; Barbosa, Maria J; Vermuë, Marian H; Wijffels, René H

2011-01-01

Worldwide, microalgal biofuel production is being investigated. It is strongly debated which type of production technology is the most adequate. Microalgal biomass production costs were calculated for 3 different micro algal production systems operating at commercial scale today: open ponds, horizontal tubular photobioreactors and flat panel photobioreactors. For the 3 systems, resulting biomass production costs including dewatering, were 4.95, 4.15 and 5.96 € per kg, respectively. The important cost factors are irradiation conditions, mixing, photosynthetic efficiency of systems, medium- and carbon dioxide costs. Optimizing production with respect to these factors, a price of € 0.68 per kg resulted. At this cost level microalgae become a promising feedstock for biodiesel and bulk chemicals. Photobioreactors may become attractive for microalgal biofuel production. Copyright © 2010 Elsevier Inc. All rights reserved.

Community Involvement in Marine Protected Areas.

Science.gov (United States)

Kaza, Stephanie

1988-01-01

Lists several key concepts in developing successful interpretive programs for marine protected areas with community involvement. Identifies educational tools that help foster community involvement in conservation and management. Cites three model programs. Sets standards and goals for international success including leadership, education,…

Dependence of carbon dioxide concentration on microalgal carbon dioxide fixation

Energy Technology Data Exchange (ETDEWEB)

Yun, Yeoung Sang; Park, Song Moon [Department of Chemical Engineering, School of Environmental Engineering, Pohang University of Science and Technology, Pohang (Korea); Bolesky, Bohumil [Department of Chemical Engineering, McGill University (Canada)

1999-10-01

Batch cultivation of chlorella vulgaris was carried out under various CO{sub 2} concentrations in order to understand and describe mathematically the CO{sub 2} inhibition of microalgal CO{sub 2} fixation. The volumetric CO{sub 2} transfer coefficient from mixture gas to culture medium was estimated from the volumetric O{sub 2} transfer coefficient obtained experimentally. Using this transfer coefficient and aquatic equilibrium relationship between dissolved inorganic carbons, the behavior of dissolved CO{sub 2} was calculated during microalgal culture. When air containing 0.035%(v/v) CO{sub 2} was supplied into microalgal culture, the fixation rate was limited by CO{sub 2} transfer rate. However, the limitation was disappeared by supplying mixture gas containing above 2%(v/v) CO{sub 2} and the dissolved CO{sub 2} concentration was maintained at the saturated value. In the range of CO{sub 2} partial pressure in the flue gases from thermal power sations and steel-making plants, the microalgal CO{sub 2} fixation rate was inhibited. The CO{sub 2} fixation rate was successfully formulated by a new empirical equation as a function of dissolved CO{sub 2} concentration, which could be useful for modeling and simulating the performance of photobioreaction with enriched CO{sub 2}. Also, it was found that the CO{sub 2} inhibition of microalgal CO{sub 2} fixation was reversible and that microalgal CO{sub 2} fixation process could be stable against a shock of unusually high CO{sub 2} concentration. 29 refs., 8 figs.

Biodiesel production from microalgal isolates of southern Pakistan and quantification of FAMEs by GC-MS/MS analysis

Directory of Open Access Journals (Sweden)

Musharraf Syed

2012-12-01

Full Text Available Abstract Background Microalgae have attracted major interest as a sustainable source for biodiesel production on commercial scale. This paper describes the screening of six microalgal species, Scenedesmus quadricauda, Scenedesmus acuminatus, Nannochloropsis sp., Anabaena sp., Chlorella sp. and Oscillatoria sp., isolated from fresh and marine water resources of southern Pakistan for biodiesel production and the GC-MS/MS analysis of their fatty acid methyl esters (FAMEs. Results Growth rate, biomass productivity and oil content of each algal species have been investigated under autotrophic condition. Biodiesel was produced from algal oil by acid catalyzed transesterification reaction and resulting fatty acid methyl esters (FAMEs content was analyzed by GC/MS. Fatty acid profiling of the biodiesel, obtained from various microalgal oils showed high content of C-16:0, C-18:0, cis-Δ9C-18:1, cis-Δ11C-18:1 (except Scenedesmus quadricauda and 10-hydroxyoctadecanoic (except Scenedesmus acuminatus. Absolute amount of C-14:0, C-16:0 and C-18:0 by a validated GC-MS/MS method were found to be 1.5-1.7, 15.0-42.5 and 4.2-18.4 mg/g, respectively, in biodiesel obtained from various microalgal oils. Biodiesel was also characterized in terms of cetane number, kinematic viscosity, density and higher heating value and compared with the standard values. Conclusion Six microalgae of local origin were screened for biodiesel production. A method for absolute quantification of three important saturated fatty acid methyl esters (C-14, C-16 and C-18 by gas chromatography-tandem mass spectrometry (GC-MS/MS, using multiple reactions monitoring (MRM mode, was employed for the identification and quantification of biodiesels obtained from various microalgal oils. The results suggested that locally found microalgae can be sustainably harvested for the production of biodiesel. This offers the tremendous economic opportunity for an energy-deficient nation.

Third-generation biofuels: current and future research on microalgal lipid biotechnology

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Li-Beisson Yonghua

2013-11-01

Full Text Available One pressing issue faced by modern societies is to develop renewable energy for transportation. Microalgal biomass offers an attractive solution due to its high (annual surface biomass productivity, efficient conversion of solar energy into chemical energy and the ability to grow on non-agricultural land. Despite these considerable advantages, microalgal biofuels are not yet commercially sustainable. Major challenges lie in improving both cultivation technologies and microalgal strains. A microalgal crop species is yet to emerge. In this review, we focus on researches aiming at understanding and harnessing lipid metabolism in microalgae in view of producing lipid-based biofuels such as biodiesel. Current biotechnological challenges and key progresses made in the development of algal models, genetic tools and lipid metabolic engineering strategies are reviewed. Possible future research directions to increase oil yields in microalgae are also highlighted.

Modelling of green microalgal growth and algal storage processes using wastewater resources

DEFF Research Database (Denmark)

Wágner, Dorottya Sarolta; Plósz, Benedek G.; Valverde Pérez, Borja

2017-01-01

Recent research focuses on the recovery of nutrients, water and energy from wastewater. Microalgal cultivation on wastewater resources is considered as a more sustainable means to produce fertilizers or biofuels. Innovative systems that incorporate microalgal cultivation into conventional wastewa...... have been developed according to the activated sludge modelling (ASM) framework to facilitate the integration with existing modelling frameworks in water treatment. This chapter presents in detail the recently developed ASM-A biokinetic green microalgal process model. The model includes...

Kinetics of inorganic carbon utilization by microalgal biofilm in a flat plate photoreactor

Energy Technology Data Exchange (ETDEWEB)

Lin, Y.H.; Leu, J.Y.; Lan, C.R.; Lin, P.H.P.; Chang, F.L. [Development Center for Biotechnology, Taipei (Taiwan). Dept. for Environmental Program

2003-11-01

A kinetic model was developed to describe inorganic carbon utilization by microalgae biofilm in a flat plate photoreactor. The model incorporates the fundamental mechanisms of diffusive mass transport and biological reaction of inorganic carbon by microalgal biofilm. An advanced numerical technique, the orthogonal collocation method and Gear's method, was employed to solve this kinetic model. The model solutions included the concentration profiles of inorganic carbon in the microalgal biofilm, the growths of suspended microalgae and microalgal biofilm, the effluent concentrations of inorganic carbon, and the flux of inorganic carbon from bulk liquid into biofilm. The batch kinetic test was independently conducted to determine biokinetic parameters used in the microalgal biofilm model simulation while initial thickness of microalgal biofilm were assumed. A laboratory-scale flat plate photoreactor with a high recycle flow rate was set up and conducted to verify the model. The volume of photoreactor is 60 l which yields a hydraulic retention time of 1.67 days. The model-generated inorganic carbon and the suspended microalgae concentration curves agreed well with those obtained in the laboratory-scale test. The fixation efficiencies of HCO{sub 3}{sup -} and CO{sub 2} are 98.5% and 90% at a steady-state condition, respectively. The concentration of suspended microalgal cell reached up to 12 mg/l at a maximum growth rate while the thickness of microalgal biofilm was estimated to be 104 pm at a steady-state condition. The approaches of experiments and model simulation presented in this study could be employed for the design of a flat plate photoreactor to treat CO{sub 2} by microalgal biofilm in a fossil-fuel power plant.

FY1995 microalgal biotechnology for recycling of pollutants; 1995 nendo tayona sorui kino wo kiban to suru seibutsuken busshitsu junkangta sogo saishigenka gijutsu

Energy Technology Data Exchange (ETDEWEB)

NONE

1997-03-01

The objectives are 1) development of biological processes needed for the treatment of pollutants and the conversion of resulting biomass to value added products such as energy and fine chemicals, and 2) development of techniques for monitoring of both biological and chemical hazards associated with process operation. We developed a microalgal system for simultaneous removal of CO{sub 2}/NO{sub x} from flue gas, as well as an electro-osmotic method for recovery of microalgal cells. A strategy for effective culturing of photoautotrophic cells in photobioreactors was also proposed. We utilized waste algal biomass to produce biosurfactants, and studied about structure-function relationship of lipopeptide biosurfactants. As an energy product, H{sub 2} was produced via lactic acid fermentation of algal biomass. Physiology of marine phytoplankton was also studied in relation to the future mass production of microalgal biomass. A rapid monitoring of microbial populations was possible by using fluorescent probes. An enzyme immunosorbent assay system specific to fish metallothionein was established for the assessment of aquatic environmental pollution. Human herpesvirus latent infection was effectively applied to biological assay of environmental hygiene. (NEDO)

Superstructure optimization of biodiesel production from microalgal biomass

DEFF Research Database (Denmark)

Rizwan, Muhammad; Lee, Jay H.; Gani, Rafiqul

2013-01-01

In this study, we propose a mixed integer nonlinear programming (MINLP) model for superstructure based optimization of biodiesel production from microalgal biomass. The proposed superstructure includes a number of major processing steps for the production of biodiesel from microalgal biomass...... for the production of biodiesel from microalgae. The proposed methodology is tested by implementing on a specific case study. The MINLP model is implemented and solved in GAMS using a database built in Excel. The results from the optimization are analyzed and their significances are discussed....

Microalgal Mass Culture Room Harvest Records

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The microalgal mass culture room, housed at the NOAA Fisheries' Milford CT laboratory, provides research grade microalgae (phytoplankton) to in-house and...

Marine protected areas increase resilience among coral reef communities.

Science.gov (United States)

Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M

2016-06-01

With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider ecosystem functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of coral reef communities to natural disturbances, including coral bleaching, coral diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier Reef, we show that within MPAs, (1) reef community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects. © 2016 John Wiley & Sons Ltd/CNRS.

Perspectives of microalgal biofuels as a renewable source of energy

International Nuclear Information System (INIS)

Kiran, Bala; Kumar, Ritunesh; Deshmukh, Devendra

2014-01-01

Highlights: • Microalgae offer solution of wastewater treatment, CO 2 sequestration, and energy crises. • Microalgal biofuel is renewable, nontoxic and environmentally friendly option. • Integration of wastewater treatment with biofuels production has made them more cost effective. • This article details out the potential production process and benefits of microalgal biofuels. - Abstract: Excessive use of fossil fuels to satisfy our rapidly increasing energy demand has created severe environmental problems, such as air pollution, acid rain and global warming. Biofuels are a potential alternative to fossil fuels. First- and second-generation biofuels face criticism due to food security and biodiversity issues. Third-generation biofuels, based on microalgae, seem to be a plausible solution to the current energy crisis, as their oil-producing capability is many times higher than that of various oil crops. Microalgae are the fastest-growing plants and can serve as a sustainable energy source for the production of biodiesel and several other biofuels by conversion of sunlight into chemical energy. Biofuels produced from microalgae are renewable, non-toxic, biodegradable and environment friendly. Microalgae can be grown in open pond systems or closed photobioreactors. Microalgal biofuels are a potential means to keep the development of human activities in synchronization with the environment. The integration of wastewater treatment with biofuel production using microalgae has made microalgal biofuels more attractive and cost effective. A biorefinery approach can also be used to improve the economics of biofuel production, in which all components of microalgal biomass (i.e., proteins, lipids and carbohydrates) are used to produce useful products. The integration of various processes for maximum economic and environmental benefits minimizes the amount of waste produced and the pollution level. This paper presents an overview of various aspects associated with

Role of granular activated carbon in the microalgal cultivation from bacteria contamination.

Science.gov (United States)

Ni, Zhi-Yi; Li, Jing-Ya; Xiong, Zhao-Zhao; Cheng, Li-Hua; Xu, Xin-Hua

2018-01-01

Microalgal wastewater treatment has been considered as one of the most promising measures to treat nitrogen and phosphorus in the municipal wastewater. While the municipal wastewater provides sufficient nitrogen and phosphorus for microalgal growth, the microalgae still faces serious biological contamination caused by bacteria in wastewater. In this study, the commercial granular activated carbon (GAC) was added into the simulated municipal wastewater to avoid the influence of bacteria on the growth of microalgae. The extracellular organic matter (EOM) in microalgal broth was then characterized to enlighten the role of GAC in reducing the bioavailability of EOM. The results showed that the GAC addition could increase the dry weight of microalgae from 0.06mgL -1 to 0.46mgL -1 under the condition of bacterial inoculation. The GAC could mitigate bacterial contamination mainly due to its adsorption of both bacteria and EOM that might contain algicidal extracellular substances. Moreover, compared to the control group, the GAC addition could mitigate the microalgal lysis caused by bacteria and thus greatly reduce the bioavailability of EOM from 2.80mgL -1 to 0.61mgL -1 , which was beneficial for the improvement of biostability and reuse of effluent after the microalgal harvesting. Copyright © 2017 Elsevier Ltd. All rights reserved.

Identification of an industrial microalgal strain for starch production in biorefinery context

NARCIS (Netherlands)

Gifuni, Imma; Olivieri, Giuseppe; Pollio, Antonino; Marzocchella, Antonio

2018-01-01

The recent trends in microalgal cultures are focused on the biorefinery of the biomass components. Some of them are not completely valorised, for example starch. Since there is a wide market for starch products in food and non-food industries, the exploitation of microalgal starch fractions could

Microalgal Cultivation in Secondary Effluent: Recent Developments and Future Work

Directory of Open Access Journals (Sweden)

Junping Lv

2017-01-01

Full Text Available Eutrophication of water catchments and the greenhouse effect are major challenges in developing the global economy in the near future. Secondary effluents, containing high amounts of nitrogen and phosphorus, need further treatment before being discharged into receiving water bodies. At the same time, new environmentally friendly energy sources need to be developed. Integrating microalgal cultivation for the production of biodiesel feedstock with the treatment of secondary effluent is one way of addressing both issues. This article provides a comprehensive review of the latest progress in microalgal cultivation in secondary effluent to remove pollutants and accumulate lipids. Researchers have discovered that microalgae remove nitrogen and phosphorus effectively from secondary effluent, accumulating biomass and lipids in the process. Immobilization of appropriate microalgae, and establishing a consortium of microalgae and/or bacteria, were both found to be feasible ways to enhance pollutant removal and lipid production. Demonstrations of pilot-scale microalgal cultures in secondary effluent have also taken place. However there is still much work to be done in improving pollutants removal, biomass production, and lipid accumulation in secondary effluent. This includes screening microalgae, constructing the consortium, making use of flue gas and nitrogen, developing technologies related to microalgal harvesting, and using lipid-extracted algal residues (LEA.

Life in the "plastisphere": microbial communities on plastic marine debris.

Science.gov (United States)

Zettler, Erik R; Mincer, Tracy J; Amaral-Zettler, Linda A

2013-07-02

Plastics are the most abundant form of marine debris, with global production rising and documented impacts in some marine environments, but the influence of plastic on open ocean ecosystems is poorly understood, particularly for microbial communities. Plastic marine debris (PMD) collected at multiple locations in the North Atlantic was analyzed with scanning electron microscopy (SEM) and next-generation sequencing to characterize the attached microbial communities. We unveiled a diverse microbial community of heterotrophs, autotrophs, predators, and symbionts, a community we refer to as the "Plastisphere". Pits visualized in the PMD surface conformed to bacterial shapes suggesting active hydrolysis of the hydrocarbon polymer. Small-subunit rRNA gene surveys identified several hydrocarbon-degrading bacteria, supporting the possibility that microbes play a role in degrading PMD. Some Plastisphere members may be opportunistic pathogens (the authors, unpublished data) such as specific members of the genus Vibrio that dominated one of our plastic samples. Plastisphere communities are distinct from surrounding surface water, implying that plastic serves as a novel ecological habitat in the open ocean. Plastic has a longer half-life than most natural floating marine substrates, and a hydrophobic surface that promotes microbial colonization and biofilm formation, differing from autochthonous substrates in the upper layers of the ocean.

Microalgal toxin(s): characteristics and importance

African Journals Online (AJOL)

Prokaryotic and eukaryotic microalgae produce a wide array of compounds with biological activities. These include antibiotics, algicides, toxins, pharmaceutically active compounds and plant growth regulators. Toxic microalgae, in this sense, are common only among the cyanobacteria and dinoflagellates. The microalgal ...

Qualitative Analysis of Microbial Dynamics during Anaerobic Digestion of Microalgal Biomass in a UASB Reactor

Directory of Open Access Journals (Sweden)

Anna Doloman

2017-01-01

Full Text Available Anaerobic digestion (AD is a microbiologically coordinated process with dynamic relationships between bacterial players. Current understanding of dynamic changes in the bacterial composition during the AD process is incomplete. The objective of this research was to assess changes in bacterial community composition that coordinates with anaerobic codigestion of microalgal biomass cultivated on municipal wastewater. An upflow anaerobic sludge blanket reactor was used to achieve high rates of microalgae decomposition and biogas production. Samples of the sludge were collected throughout AD and extracted DNA was subjected to next-generation sequencing using methanogen mcrA gene specific and universal bacterial primers. Analysis of the data revealed that samples taken at different stages of AD had varying bacterial composition. A group consisting of Bacteroidales, Pseudomonadales, and Enterobacteriales was identified to be putatively responsible for the hydrolysis of microalgal biomass. The methanogenesis phase was dominated by Methanosarcina mazei. Results of observed changes in the composition of microbial communities during AD can be used as a road map to stimulate key bacterial species identified at each phase of AD to increase yield of biogas and rate of substrate decomposition. This research demonstrates a successful exploitation of methane production from microalgae without any biomass pretreatment.

Qualitative Analysis of Microbial Dynamics during Anaerobic Digestion of Microalgal Biomass in a UASB Reactor

Science.gov (United States)

Doloman, Anna; Soboh, Yousef; Walters, Andrew J.; Sims, Ronald C.

2017-01-01

Anaerobic digestion (AD) is a microbiologically coordinated process with dynamic relationships between bacterial players. Current understanding of dynamic changes in the bacterial composition during the AD process is incomplete. The objective of this research was to assess changes in bacterial community composition that coordinates with anaerobic codigestion of microalgal biomass cultivated on municipal wastewater. An upflow anaerobic sludge blanket reactor was used to achieve high rates of microalgae decomposition and biogas production. Samples of the sludge were collected throughout AD and extracted DNA was subjected to next-generation sequencing using methanogen mcrA gene specific and universal bacterial primers. Analysis of the data revealed that samples taken at different stages of AD had varying bacterial composition. A group consisting of Bacteroidales, Pseudomonadales, and Enterobacteriales was identified to be putatively responsible for the hydrolysis of microalgal biomass. The methanogenesis phase was dominated by Methanosarcina mazei. Results of observed changes in the composition of microbial communities during AD can be used as a road map to stimulate key bacterial species identified at each phase of AD to increase yield of biogas and rate of substrate decomposition. This research demonstrates a successful exploitation of methane production from microalgae without any biomass pretreatment. PMID:29259629

Nutrient removal and biomass production: advances in microalgal biotechnology for wastewater treatment.

Science.gov (United States)

Abinandan, Sudharsanam; Subashchandrabose, Suresh R; Venkateswarlu, Kadiyala; Megharaj, Mallavarapu

2018-05-17

Owing to certain drawbacks, such as energy-intensive operations in conventional modes of wastewater treatment (WWT), there has been an extensive search for alternative strategies in treatment technology. Biological modes for treating wastewaters are one of the finest technologies in terms of economy and efficiency. An integrated biological approach with chemical flocculation is being conventionally practiced in several-sewage and effluent treatment plants around the world. Overwhelming responsiveness to treat wastewaters especially by using microalgae is due to their simplest photosynthetic mechanism and ease of acclimation to various habitats. Microalgal technology, also known as phycoremediation, has been in use for WWT since 1950s. Various strategies for the cultivation of microalgae in WWT systems are evolving faster. However, the availability of innovative approaches for maximizing the treatment efficiency, coupled with biomass productivity, remains the major bottleneck for commercialization of microalgal technology. Investment costs and invasive parameters also delimit the use of microalgae in WWT. This review critically discusses the merits and demerits of microalgal cultivation strategies recently developed for maximum pollutant removal as well as biomass productivity. Also, the potential of algal biofilm technology in pollutant removal, and harvesting the microalgal biomass using different techniques have been highlighted. Finally, an economic assessment of the currently available methods has been made to validate microalgal cultivation in wastewater at the commercial level.

Learning from disaster: Community-based marine protected areas in Fiji

OpenAIRE

Yoshito Takasaki

2013-01-01

This paper empirically examines whether and how experiencing climate-related disasters can improve the rural poor fs adaptation to climate change through community-based resource management. Original household survey data in Fiji capture the unique sequence of a tropical cyclone and the establishment of community-based marine protected areas as a natural experiment. The analysis reveals that household disaster victimization increases its support for establishing marine protected areas for fut...

Dynamics of microalgal communities in the water-column/sediment interface of the inner shelf off Parana State, Southern Brazil

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Ricardo Luiz Queiroz

2004-12-01

Full Text Available The composition and biomass of the microalgal community at the water-column/sediment interface on the continental shelf off Parana State (Brazil were studied every 2 months during 1999. Samples for cell identification and determination of chlorophyll a were taken from the interface layer and at discrete depths up to 4 m above the sediment. Results showed a community mainly formed by benthic and planktonic diatoms >30 µm, benthic diatoms 30 µm, which accounted for most of the pigment biomass, were resuspended from the interface after turbulent periods, and may take advantage of calm periods to stay and grow at the interface. Small benthic diatoms were more susceptible to wind-induced turbulence occurring in higher densities in the water column just above the water-sediment interface. A cyanobacterial bloom (Trichodesmiun was observed at these bottom layers in the spring-summer periods.A composição geral e a biomassa da comunidade microalgal da interface sedimento/água da plataforma do Estado do Paraná (Brasil foram estudadas em 1999 em relação ao regime de ventos. A cada dois meses foram coletadas amostras para a identificação de organismos e determinação de clorofila a, na interface água-sedimento e em profundidades discretas, ao longo da coluna d'água, até 4m acima do sedimento. Os resultados obtidos revelaram uma comunidade constituída principalmente por diatomáceas planctônicas e bentônicas maiores que 30 µm, diatomáceas bentônicas menores que 30 µm, e cianobactérias coloniais. As densidades celulares foram geralmente mais altas na interface. Eventos de mistura e sedimentação parecem ser determinantes na regulação da composição e biomassa de tais comunidades. Formas menores, mais susceptíveis à turbulência, dominaram a comunidade de água de fundo na maioria das ocasiões, e foram as mais abundantes na interface apenas em períodos de extrema estabilidade. Células maiores, aparentemente contendo a maior parte

Do plastic particles affect microalgal photosynthesis and growth?

Science.gov (United States)

Sjollema, Sascha B; Redondo-Hasselerharm, Paula; Leslie, Heather A; Kraak, Michiel H S; Vethaak, A Dick

2016-01-01

The unbridled increase in plastic pollution of the world's oceans raises concerns about potential effects these materials may have on microalgae, which are primary producers at the basis of the food chain and a major global source of oxygen. Our current understanding about the potential modes and mechanisms of toxic action that plastic particles exert on microalgae is extremely limited. How effects might vary with particle size and the physico-chemical properties of the specific plastic material in question are equally unelucidated, but may hold clues to how toxicity, if observed, is exerted. In this study we selected polystyrene particles, both negatively charged and uncharged, and three different sizes (0.05, 0.5 and 6μm) for testing the effects of size and material properties. Microalgae were exposed to different polystyrene particle sizes and surface charges for 72h. Effects on microalgal photosynthesis and growth were determined by pulse amplitude modulation fluorometry and flow cytometry, respectively. None of the treatments tested in these experiments had an effect on microalgal photosynthesis. Microalgal growth was negatively affected (up to 45%) by uncharged polystyrene particles, but only at high concentrations (250mg/L). Additionally, these adverse effects were demonstrated to increase with decreasing particle size. Copyright © 2015 Elsevier B.V. All rights reserved.

Interactions between polystyrene microplastics and marine phytoplankton lead to species-specific hetero-aggregation.

Science.gov (United States)

Long, Marc; Paul-Pont, Ika; Hégaret, Hélène; Moriceau, Brivaela; Lambert, Christophe; Huvet, Arnaud; Soudant, Philippe

2017-09-01

To understand the fate and impacts of microplastics (MP) in the marine ecosystems, it is essential to investigate their interactions with phytoplankton as these may affect MP bioavailability to marine organisms as well as their fate in the water column. However, the behaviour of MP with marine phytoplanktonic cells remains little studied and thus unpredictable. The present study assessed the potential for phytoplankton cells to form hetero-aggregates with small micro-polystyrene (micro-PS) particles depending on microalgal species and physiological status. A prymnesiophycea, Tisochrysis lutea, a dinoflagellate, Heterocapsa triquetra, and a diatom, Chaetoceros neogracile, were exposed to micro-PS (2 μm diameter; 3.96 μg L -1 ) during their growth culture cycles. Micro-PS were quantified using an innovative flow-cytometry approach, which allowed the monitoring of the micro-PS repartition in microalgal cultures and the distinction between free suspended micro-PS and hetero-aggregates of micro-PS and microalgae. Hetero-aggregation was observed for C. neogracile during the stationary growth phase. The highest levels of micro-PS were "lost" from solution, sticking to flasks, with T. lutea and H. triquetra cultures. This loss of micro-PS sticking to the flask walls increased with the age of the culture for both species. No effects of micro-PS were observed on microalgal physiology in terms of growth and chlorophyll fluorescence. Overall, these results highlight the potential for single phytoplankton cells and residual organic matter to interact with microplastics, and thus potentially influence their distribution and bioavailability in experimental systems and the water column. Copyright © 2017 Elsevier Ltd. All rights reserved.

The effect of light supply on microalgal growth, CO2 uptake and nutrient removal from wastewater

International Nuclear Information System (INIS)

Gonçalves, A.L.; Simões, M.; Pires, J.C.M.

2014-01-01

Highlights: • Effect of irradiance and light:dark ratio on microalgal growth was analysed. • Microalgal growth, CO 2 capture, nitrogen and phosphorus uptake were evaluated. • Higher irradiances and light periods supported higher growth and CO 2 uptake rates. • All the studied microalgal strains have shown high nitrogen removal efficiencies. • The highest phosphorus removal efficiency was 67.6%. - Abstract: Microalgal based biofuels have been reported as an attractive alternative for fossil fuels, since they constitute a renewable energy source that reduces greenhouse gas emissions to the atmosphere. However, producing biofuels from microalgae is still not economically viable. Therefore, the integration of biofuel production with other microalgal applications, such as CO 2 capture and nutrient removal from wastewaters, would reduce the microalgal production costs (and the environmental impact of cultures), increasing the economic viability of the whole process. Additionally, producing biofuels from microalgae strongly depends on microalgal strain and culture conditions. This study evaluates the effect of culture conditions, namely light irradiance (36, 60, 120 and 180 μE m −2 s −1 ) and light:dark ratio (10:14, 14:10 and 24:0), on microalgal growth, atmospheric CO 2 uptake and nutrient (nitrogen and phosphorous) removal from culture medium. Four different microalgal strains, Chlorella vulgaris, Pseudokirchneriella subcapitata, Synechocystis salina and Microcystis aeruginosa, were studied to ascertain the most advantageous regarding the referred applications. This study has shown that higher light irradiance values and light periods resulted in higher specific growth rates and CO 2 uptake rates. C. vulgaris presented the highest specific growth rate and CO 2 uptake rate: 1.190 ± 0.041 d −1 and 0.471 ± 0.047 g CO2 L −1 d −1 , respectively. All the strains have shown high nitrogen removal efficiencies, reaching 100% removal percentages in

Towards microalgal triglycerides in the commodity markets

NARCIS (Netherlands)

Benvenuti, Giulia; Ruiz, Jesús; Lamers, Packo P.; Bosma, Rouke; Wijffels, René H.; Barbosa, Maria J.

2017-01-01

Background: Microalgal triglycerides (TAGs) hold great promise as sustainable feedstock for commodity industries. However, to determine research priorities and support business decisions, solid techno-economic studies are essential. Here, we present a techno-economic analysis of two-step TAG

Kinetics of Chlorella protothecoides microalgal oil using base catalyst

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Mukesh Kumar

2016-09-01

Full Text Available Due to continuous diminishing of fossil fuel resources and emission of greenhouse gases, the search for alternative fuels such as biodiesel and bioethanol has become inevitable. Biodiesel, also known as fatty acid methyl or ethyl ester, has emerged as a substitute for diesel because of similar fuel properties. Presently, biodiesel is produced from edible, non-edible and microalgal oil. Chlorella protothecoides (lipid content 14.6–57.8% is being investigated as the potential microalgae species owing to high oil content, less land area required for cultivation and faster growth rate. The present investigation shows the results of the kinetics of transesterification of C. protothecoides microalgal oil carried out at optimum conditions of catalyst concentration, reaction temperature, molar ratio and reaction time. The percentage of methyl ester yield is the only parameter chosen to carry out the optimum parameter and the kinetics of transesterification. The reaction rate constant was to be 0.0618 min−1. Furthermore, microalgal biodiesel is characterized for physico-chemical properties that are found to meet American (ASTM D6751 and Indian (IS 15607 standards, especially in cold flow properties and stability of conventional biodiesel.

Marine and giant viruses as indicators of a marine microbial community in a riverine system.

Science.gov (United States)

Dann, Lisa M; Rosales, Stephanie; McKerral, Jody; Paterson, James S; Smith, Renee J; Jeffries, Thomas C; Oliver, Rod L; Mitchell, James G

2016-12-01

Viral communities are important for ecosystem function as they are involved in critical biogeochemical cycles and controlling host abundance. This study investigates riverine viral communities around a small rural town that influences local water inputs. Myoviridae, Siphoviridae, Phycodnaviridae, Mimiviridae, Herpesviridae, and Podoviridae were the most abundant families. Viral species upstream and downstream of the town were similar, with Synechoccocus phage, salinus, Prochlorococcus phage, Mimivirus A, and Human herpes 6A virus most abundant, contributing to 4.9-38.2% of average abundance within the metagenomic profiles, with Synechococcus and Prochlorococcus present in metagenomes as the expected hosts for the phage. Overall, the majority of abundant viral species were or were most similar to those of marine origin. At over 60 km to the river mouth, the presence of marine communities provides some support for the Baas-Becking hypothesis "everything is everywhere, but, the environment selects." We conclude marine microbial species may occur more frequently in freshwater systems than previously assumed, and hence may play important roles in some freshwater ecosystems within tens to a hundred kilometers from the sea. © 2016 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.

Physico-chemical and biotic factors influencing microalgal seed ...

African Journals Online (AJOL)

Physico-chemical and biotic factors influencing microalgal seed culture propagation for inoculation of a ... African Journal of Biotechnology ... used to inoculate an open raceway pond for large scale biomass production for biodiesel production.

Use of Cellulolytic Marine Bacteria for Enzymatic Pretreatment in Microalgal Biogas Production

Science.gov (United States)

Muñoz, Camilo; Hidalgo, Catalina; Zapata, Manuel; Jeison, David; Riquelme, Carlos

2014-01-01

In this study, we designed and evaluated a microalgal pretreatment method using cellulolytic bacteria that naturally degrades microalgae in their native habitat. Bacterial strains were isolated from each of two mollusk species in a medium containing 1% carboxymethyl cellulose agar. We selected nine bacterial strains that had endoglucanase activity: five strains from Mytilus chilensis, a Chilean mussel, and four strains from Mesodesma donacium, a clam found in the Southern Pacific. These strains were identified phylogenetically as belonging to the genera Aeromonas, Pseudomonas, Chryseobacterium, and Raoultella. The cellulase-producing capacities of these strains were characterized, and the degradation of cell walls in Botryococcus braunii and Nannochloropsis gaditana was tested with “whole-cell” cellulolytic experiments. Aeromonas bivalvium MA2, Raoultella ornithinolytica MA5, and Aeromonas salmonicida MC25 degraded B. braunii, and R. ornithinolytica MC3 and MA5 degraded N. gaditana. In addition, N. gaditana was pretreated with R. ornithinolytica strains MC3 and MA5 and was then subjected to an anaerobic digestion process, which increased the yield of methane by 140.32% and 158.68%, respectively, over that from nonpretreated microalgae. Therefore, a “whole-cell” cellulolytic pretreatment can increase the performance and efficiency of biogas production. PMID:24795376

Treatment of cattle-slaughterhouse wastewater and the reuse of sludge for biodiesel production by microalgal heterotrophic bioreactors

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Mariana Manzoni Maroneze

2014-12-01

Full Text Available Microalgal heterotrophic bioreactors are a potential technological development that can convert organic matter, nitrogen and phosphorus of wastewaters into a biomass suitable for energy production. The aim of this work was to evaluate the performance of microalgal heterotrophic bioreactors in the secondary treatment of cattle-slaughterhouse wastewater and the reuse of microalgal sludge for biodiesel production. The experiments were performed in a bubble column bioreactor using the microalgae Phormidium sp. Heterotrophic microalgal bioreactors removed 90 % of the chemical oxygen demand, 57 % of total nitrogen and 52 % of total phosphorus. Substantial microalgal sludge is produced in the process (substrate yield coefficient of 0.43 mg sludge mg chemical oxygen demand−¹, resulting in a biomass with high potential for producing biodiesel (ester content of more than 99 %, cetane number of 55, iodine value of 73.5 g iodine 100 g−¹, unsaturation degree of ~75 % and a cold filter plugging point of 5 ºC.

Microalgal Cultivation in Treating Liquid Digestate from Biogas Systems.

Science.gov (United States)

Xia, Ao; Murphy, Jerry D

2016-04-01

Biogas production via anaerobic digestion (AD) has rapidly developed in recent years. In addition to biogas, digestate is an important byproduct. Liquid digestate is the major fraction of digestate and may contain high levels of ammonia nitrogen. Traditional processing technologies (such as land application) require significant energy inputs and raise environmental risks (such as eutrophication). Alternatively, microalgae can efficiently remove the nutrients from digestate while producing high-value biomass that can be used for the production of biochemicals and biofuels. Both inorganic and organic carbon sources derived from biogas production can significantly improve microalgal production. Land requirement for microalgal cultivation is estimated as 3% of traditional direct land application of digestate. Copyright © 2015 Elsevier Ltd. All rights reserved.

Harvesting Microalgal Biomass grown in Anaerobic Sewage Treatment Effluent by the Coagulation-Flocculation Method: Effect of pH

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Servio Tulio Cassini

2017-03-01

Full Text Available ABSTRACT Harvesting is a critical step in microalgal biomass production process for many reasons. Among the existing techniques available for harvesting and dewatering microalgal biomass, recovery from aqueous medium by coagulation-flocculation has been the most economically viable process, althoughit is highly dependent on pH. This study aims to assess alternative coagulants compared to the standard coagulant aluminum sulfate for microalgal biomass recovery from anaerobic effluent of domestic sewage treatment. The effluent quality was also analyzed after biomass recovery. Coagulants represented by modified tannin, cationic starch and aluminum sulfate recovered more than 90% of algae biomass, at concentrations greater than 80 mg/L, in the pH range 7-10. Cationic starch promoted higher microalgal biomass recovery with a wider pH range. Powdered seeds of Moringa oleifera and Hibiscus esculentus(okra gum promoted biomass removal of 50%, only in the acidic range of pH. After sedimentation of the microalgal biomass, the effluents showed a removal of >80% for phosphorus and nitrogen values and >50% for BOD and COD when using aluminum sulfate, cationic starch and modified tannin as coagulants. Natural organic coagulants in a wide pH range can replace aluminum sulfate, a reference coagulant in microalgal biomass recovery, without decreasing microalgal biomass harvesting efficiency and the quality of the final effluent.

Physiology limits commercially viable photoautotrophic production of microalgal biofuels.

Science.gov (United States)

Kenny, Philip; Flynn, Kevin J

2017-01-01

Algal biofuels have been offered as an alternative to fossil fuels, based on claims that microalgae can provide a highly productive source of compounds as feedstocks for sustainable transport fuels. Life cycle analyses identify algal productivity as a critical factor affecting commercial and environmental viability. Here, we use mechanistic modelling of the biological processes driving microalgal growth to explore optimal production scenarios in an industrial setting, enabling us to quantify limits to algal biofuels potential. We demonstrate how physiological and operational trade-offs combine to restrict the potential for solar-powered algal-biodiesel production in open ponds to a ceiling of ca. 8000 L ha -1 year -1 . For industrial-scale operations, practical considerations limit production to ca. 6000 L ha -1 year -1 . According to published economic models and life cycle analyses, such production rates cannot support long-term viable commercialisation of solar-powered cultivation of natural microalgae strains exclusively as feedstock for biofuels. The commercial viability of microalgal biofuels depends critically upon limitations in microalgal physiology (primarily in rates of C-fixation); we discuss the scope for addressing this bottleneck concluding that even deployment of genetically modified microalgae with radically enhanced characteristics would leave a very significant logistical if not financial burden.

A glimpse into the future composition of marine phytoplankton communities

Directory of Open Access Journals (Sweden)

Esteban eAcevedo-Trejos

2014-07-01

Full Text Available It is expected that climate change will have significant impacts on ecosystems. Most model projections agree that the ocean will experience stronger stratification and less nutrient supply from deep waters. These changes will likely affect marine phytoplankton communities and will thus impact on the higher trophic levels of the oceanic food web. The potential consequences of future climate change on marine microbial communities can be investigated and predicted only with the help of mathematical models. Here we present the application of a model that describes aggregate properties of marine phytoplankton communities and captures the effects of a changing environment on their composition and adaptive capacity. Specifically, the model describes the phytoplankton community in terms of total biomass, mean cell size, and functional diversity. The model is applied to two contrasting regions of the Atlantic Ocean (tropical and temperate and is tested under two emission scenarios: SRES A2 or ``business as usual'' and SRES B1 or ``local utopia''. We find that all three macroecological properties will decline during the next century in both regions, although this effect will be more pronounced in the temperate region. Being consistent with previous model predictions, our results show that a simple trait-based modelling framework represents a valuable tool for investigating how phytoplankton communities may reorganize under a changing climate.

Modeling bubble dynamics and radical kinetics in ultrasound induced microalgal cell disruption.

Science.gov (United States)

Wang, Meng; Yuan, Wenqiao

2016-01-01

Microalgal cell disruption induced by acoustic cavitation was simulated through solving the bubble dynamics in an acoustical field and their radial kinetics (chemical kinetics of radical species) occurring in the bubble during its oscillation, as well as calculating the bubble wall pressure at the collapse point. Modeling results indicated that increasing ultrasonic intensity led to a substantial increase in the number of bubbles formed during acoustic cavitation, however, the pressure generated when the bubbles collapsed decreased. Therefore, cumulative collapse pressure (CCP) of bubbles was used to quantify acoustic disruption of a freshwater alga, Scenedesmus dimorphus, and a marine alga, Nannochloropsis oculata and compare with experimental results. The strong correlations between CCP and the intracellular lipid fluorescence density, chlorophyll-a fluorescence density, and cell particle/debris concentration were found, which suggests that the developed models could accurately predict acoustic cell disruption, and can be utilized in the scale up and optimization of the process. Copyright © 2015 Elsevier B.V. All rights reserved.

Marine wildlife entanglement: Assessing knowledge, attitudes, and relevant behaviour in the Australian community

International Nuclear Information System (INIS)

Pearson, Elissa; Mellish, Sarah; Sanders, Ben; Litchfield, Carla

2014-01-01

Highlights: • Marine debris and marine wildlife entanglement remains a significant global issue. • We examined awareness of this issue in an Australian community sample. • Findings reveal gaps exist in terms of what entanglement is and the risks posed. • Enhancing community understanding may facilitate greater conservation action. • The ‘Seal the Loop’ initiative provides one potential mechanism for such education. - Abstract: Marine debris remains a global challenge, with significant impacts on wildlife. Despite this, there is a paucity of research examining public understanding about marine wildlife entanglement [MWE], particularly within an Australian context. The present study surveyed two hundred and thirteen participants across three coastal sites to assess familiarity with MWE and the effectiveness of a new community education initiative ‘Seal the Loop’ [STL]. Results revealed attitudes toward marine wildlife were very positive (M 40.5, SD 4.12); however 32% of participants were unable to correctly explain what MWE is and risks to wildlife were under-estimated. STL may be one method to enhance public understanding and engagement-if community familiarity with the program can be increased. For those aware of STL (<13% of the sample at the time of the study), findings revealed this was having a positive impact (e.g. learning something new, changed waste disposal behaviours)

Contaminants reduce the richness and evenness of marine communities: A review and meta-analysis

International Nuclear Information System (INIS)

Johnston, Emma L.; Roberts, David A.

2009-01-01

Biodiversity of marine ecosystems is integral to their stability and function and is threatened by anthropogenic processes. We conducted a literature review and meta-analysis of 216 studies to understand the effects of common contaminants upon diversity in various marine communities. The most common diversity measures were species richness, the Shannon-Wiener index (H') and Pielou evenness (J). Largest effect sizes were observed for species richness, which tended to be the most sensitive index. Pollution was associated with marine communities containing fewer species or taxa than their pristine counterparts. Marine habitats did not vary in their susceptibility to contamination, rather a ∼40% reduction in richness occurred across all habitats. No class of contaminant was associated with significantly greater impacts on diversity than any other. Survey studies identified larger effects than laboratory or field experiments. Anthropogenic contamination is strongly associated with reductions in the species richness and evenness of marine habitats. - Contamination substantially reduces the biodiversity of marine communities in all major habitat types and across all major contaminant classes.

Similarity microalgal epiphyte composition on seagrass of Enhalus acoroides and Thalasia hemprichii from different waters

Science.gov (United States)

Hartati, R.; Zainuri, M.; Ambariyanto, A.; Widianingsih; Trianto, A.; Mahendrajaya, R. T.

2018-03-01

The epiphytes are all autotrophic organisms that are permanently attached to rhizomes, roots, and leaves of seagrasses. The epiphyte is an important primary producer for the seagrass ecosystem and contributes significantly to the food chain. This study aims to identify the composition of microepiphyte algae on Enhalus acoroides and Thalassia hemprichii and their similarity levels of both compositions. The 20 leaves samples of E. acoroides and T. hemprichii were observed. The epiphytic microalgae which found on the surface of the seagrass leaves were scrapped, collected in a bottle sample, and fixed with 70 % alcohol and identified into genera. The relation of epiphytic microalgal genera to the location and species of seagrass was analyzed using similarity analysis. The Chrysophyta, Cyanophyta, and Chlorophyta epiphytic microalgal were found. There were similarity variations of the microalgal epiphyte in seagrass of E. acoroides and T. hemprichii and seagrass habitat sites. Morphology and seagrass life affects the abundance and diversity of the epiphytic microalgal attached to the seagrass and it may be associated with the epiphytic lifetime in the seagrass.

Ultrasonic disintegration of microalgal biomass and consequent improvement of bioaccessibility/bioavailability in microbial fermentation.

Science.gov (United States)

Jeon, Byong-Hun; Choi, Jeong-A; Kim, Hyun-Chul; Hwang, Jae-Hoon; Abou-Shanab, Reda Ai; Dempsey, Brian A; Regan, John M; Kim, Jung Rae

2013-01-01

Microalgal biomass contains a high level of carbohydrates which can be biochemically converted to biofuels using state-of-the-art strategies that are almost always needed to employ a robust pretreatment on the biomass for enhanced energy production. In this study, we used an ultrasonic pretreatment to convert microalgal biomass (Scenedesmus obliquus YSW15) into feasible feedstock for microbial fermentation to produce ethanol and hydrogen. The effect of sonication condition was quantitatively evaluated with emphases on the characterization of carbohydrate components in microalgal suspension and on subsequent production of fermentative bioenergy. Scenedesmus obliquus YSW15 was isolated from the effluent of a municipal wastewater treatment plant. The sonication durations of 0, 10, 15, and 60 min were examined under different temperatures at a fixed frequency and acoustic power resulted in morphologically different states of microalgal biomass lysis. Fermentation was performed to evaluate the bioenergy production from the non-sonicated and sonicated algal biomasses after pretreatment stage under both mesophilic (35°C) and thermophilic (55°C) conditions. A 15 min sonication treatment significantly increased the concentration of dissolved carbohydrates (0.12 g g(-1)), which resulted in an increase of hydrogen/ethanol production through microbial fermentation. The bioconvertibility of microalgal biomass sonicated for 15 min or longer was comparable to starch as a control, indicating a high feasibility of using microalgae for fermentative bioenergy production. Increasing the sonication duration resulted in increases in both algal surface hydrophilicity and electrostatic repulsion among algal debris dispersed in aqueous solution. Scanning electron microscope images supported that ruptured algal cell allowed fermentative bacteria to access the inner space of the cell, evidencing an enhanced bioaccessibility. Sonication for 15 min was the best for fermentative

The Role of Perceptions for Community-Based Marine Resource Management

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Katharina Beyerl

2016-11-01

Full Text Available Every community-based marine resource management (CBMRM inherently takes place in a highly complex social-ecological environment, and stakeholder perceptions related to various aspects of the natural and social environment guide behavior in every stage of the management process. This paper provides an introduction to the psychology of perception with regard to marine resource management. In particular, it offers a typology of CBMRM relevant perceptions along with an analysis of psychological, societal, and physical factors that modulate them. Based on this analysis, we propose the introduction of specially trained local Perception Experts (PE’s, whose role will be to recognize and reflect individual perceptions of involved stakeholders, and to communicate them at community meetings where decisions are made. This empirically testable addition to current CBMRM schemes could help to increase participation, develop management measures that fit the capacities of the involved stakeholders more accurately, and hence, contribute to a faster rehabilitation of marine resources.

Microalgal bioremediation : Current practices and perspectives

OpenAIRE

BISWAJIT RATH

2011-01-01

During last two decades, extensive attention has been paid on the management of environmental pollution caused by hazardous materials. A number of methods has been developed for removal of such substances like precipitation, evaporation, ion-exchange etc. However these methods have several disadvantages. This review highlights the alternative biological agent abundantly present in nature i.e Microalgae as a potential sink for removal of such toxic substances from the surrounding. Microalgal b...

On diel variability of marine sediment backscattering properties caused by microphytobenthos photosynthesis: Impact of environmental factors

Science.gov (United States)

Gorska, Natalia; Kowalska-Duda, Ewa; Pniewski, Filip; Latała, Adam

2018-06-01

The study has been motivated by the development of the hydroacoustic techniques for mapping and classifying the benthic habitats and for the research of the microbenthos photosynthesis in the semi-enclosed Baltic Sea, particularly sensitive to human activity. The investigation of the effect of the benthic microalgal photosynthesis on the echo signal from the Baltic sandy sediments is continuing. The study clarifies the impact of the abiotic and biotic factors on the diel variation of the backscattering caused by the benthic microalgal photosynthetic activity. Five multiday laboratory experiments, different in hydrophysical or biological conditions, were conducted. During each measurement series, the "day" (illumination) and "night" (darkness) conditions (L:D cycle) were simulated and the diel variations of the echo energy of the backscattered signal were analyzed. The hydroacoustic data were acquired along with measuring biological and biooptical parameters and oxygen concentration. The study demonstrated the impact of microphytobenthos photosynthesis on the backscattering properties of the marine sediment which is sensitive to the illumination level, benthic microalgal biomass and macrozoobenthos bioturbation.

On the use of selective environments in microalgal cultivation

NARCIS (Netherlands)

Mooij, P.R.

2016-01-01

This thesis deals with selective environments in microalgal cultivation. As explained in Chapter 1 microalgae have changed the course of life on Earth dramatically by performing oxygenic photosynthesis. In oxygenic photosynthesis electrons from water are used to reduce carbon dioxide to

Differential response of marine flagellate communities to prokaryotic food quality

Science.gov (United States)

De Corte, D.; Paredes, G.; Sintes, E.; Herndl, G. J.

2016-02-01

Marine prokaryotes play a major role in the biogeochemical cycles. The main predators of prokaryotes are heterotrophic nanoflagellates (HNF). HNF are thus a major link connecting dissolved organic material through prokaryotic grazing to the higher trophic levels. However, little is known about the grazing specificity of HNF on specific prokaryotic taxa. Bacterial and archaeal microbes may have different nutritive values for the HNF communities, thus affecting growth rates and community composition of HNFs. In this study we investigated the influence of prey food quality on Cafeteria roenbergensis and on a natural HNF community isolated in the northern Adriatic Sea. Two Nitrosopumilus maritimus-related strains isolated from the northern Adriatic Sea (Nitrosopumilus adriaticus, Nitrosopumilus piranensis), two Nitrosococcus strains and two fast growing marine Bacteria (Pseudomonas marina and Marinobacter algicola) were fed to the HNFs. The two fast growing bacterial strains resulted in high growth rates of Cafeteria roenbergensis and the mixed HNF community, while the two Nitrosococcus strains did not. Cafeteria roenbergensis fed on N. adriaticus but it did not graze N. piranensis, suggesting that the subtle metabolic and physiological differences between these two closely related thaumarchaeal strains affect the grazing pressure to which they are exposed. Our study also indicates that prokaryotic community composition influences the composition of the HNF community.

Patterns of distribution, abundance, and change over time in a subarctic marine bird community

Science.gov (United States)

Cushing, Daniel A.; Roby, Daniel D.; Irons, David B.

2018-01-01

Over recent decades, marine ecosystems of Prince William Sound (PWS), Alaska, have experienced concurrent effects of natural and anthropogenic perturbations, including variability in the climate system of the northeastern Pacific Ocean. We documented spatial and temporal patterns of variability in the summer marine bird community in relation to habitat and climate variability using boat-based surveys of marine birds conducted during the period 1989-2012. We hypothesized that a major factor structuring marine bird communities in PWS would be proximity to the shoreline, which is theorized to relate to aspects of food web structure. We also hypothesized that shifts in physical ecosystem drivers differentially affected nearshore-benthic and pelagic components of PWS food webs. We evaluated support for our hypotheses using an approach centered on community-level patterns of spatial and temporal variability. We found that an environmental gradient related to water depth and distance from shore was the dominant factor spatially structuring the marine bird community. Responses of marine birds to this onshore-offshore environmental gradient were related to dietary specialization, and separated marine bird taxa by prey type. The primary form of temporal variability over the study period was monotonic increases or decreases in abundance for 11 of 18 evaluated genera of marine birds; 8 genera had declined, whereas 3 had increased. The greatest declines occurred in genera associated with habitats that were deeper and farther from shore. Furthermore, most of the genera that declined primarily fed on pelagic prey resources, such as forage fish and mesozooplankton, and few were directly affected by the 1989 Exxon Valdez oil spill. Our observations of synchronous declines are indicative of a shift in pelagic components of PWS food webs. This pattern was correlated with climate variability at time-scales of several years to a decade.

Patterns of distribution, abundance, and change over time in a subarctic marine bird community

Science.gov (United States)

Cushing, Daniel; Roby, Daniel D.; Irons, David B.

2017-01-01

Over recent decades, marine ecosystems of Prince William Sound (PWS), Alaska, have experienced concurrent effects of natural and anthropogenic perturbations, including variability in the climate system of the northeastern Pacific Ocean. We documented spatial and temporal patterns of variability in the summer marine bird community in relation to habitat and climate variability using boat-based surveys of marine birds conducted during the period 1989–2012. We hypothesized that a major factor structuring marine bird communities in PWS would be proximity to the shoreline, which is theorized to relate to aspects of food web structure. We also hypothesized that shifts in physical ecosystem drivers differentially affected nearshore-benthic and pelagic components of PWS food webs. We evaluated support for our hypotheses using an approach centered on community-level patterns of spatial and temporal variability. We found that an environmental gradient related to water depth and distance from shore was the dominant factor spatially structuring the marine bird community. Responses of marine birds to this onshore-offshore environmental gradient were related to dietary specialization, and separated marine bird taxa by prey type. The primary form of temporal variability over the study period was monotonic increases or decreases in abundance for 11 of 18 evaluated genera of marine birds; 8 genera had declined, whereas 3 had increased. The greatest declines occurred in genera associated with habitats that were deeper and farther from shore. Furthermore, most of the genera that declined primarily fed on pelagic prey resources, such as forage fish and mesozooplankton, and few were directly affected by the 1989 Exxon Valdez oil spill. Our observations of synchronous declines are indicative of a shift in pelagic components of PWS food webs. This pattern was correlated with climate variability at time-scales of several years to a decade.

Enzymatic transesterification of microalgal oil from Chlorella vulgaris ESP-31 for biodiesel synthesis using immobilized Burkholderia lipase.

Science.gov (United States)

Tran, Dang-Thuan; Yeh, Kuei-Ling; Chen, Ching-Lung; Chang, Jo-Shu

2012-03-01

An indigenous microalga Chlorella vulgaris ESP-31 grown in an outdoor tubular photobioreactor with CO(2) aeration obtained a high oil content of up to 63.2%. The microalgal oil was then converted to biodiesel by enzymatic transesterification using an immobilized lipase originating from Burkholderia sp. C20. The conversion of the microalgae oil to biodiesel was conducted by transesterification of the extracted microalgal oil (M-I) and by transesterification directly using disrupted microalgal biomass (M-II). The results show that M-II achieved higher biodiesel conversion (97.3 wt% oil) than M-I (72.1 wt% oil). The immobilized lipase worked well when using wet microalgal biomass (up to 71% water content) as the oil substrate. The immobilized lipase also tolerated a high methanol to oil molar ratio (>67.93) when using the M-II approach, and can be repeatedly used for six cycles (or 288 h) without significant loss of its original activity. Copyright © 2012 Elsevier Ltd. All rights reserved.

Marine macrofossil communities in the uppermost Maastrichtian chalk of Stevns Klint, Denmark

DEFF Research Database (Denmark)

Hansen, Thomas; Surlyk, Finn

2014-01-01

Three successive marine habitats and their benthic macrofossil communities have been recognised and assessed in the uppermost Maastrichtian chalk of Stevns Klint, Denmark. The mound-bedded lower Sigerslev Member was deposited below the photic zone under the influence of persistent, non-erosive bo......Three successive marine habitats and their benthic macrofossil communities have been recognised and assessed in the uppermost Maastrichtian chalk of Stevns Klint, Denmark. The mound-bedded lower Sigerslev Member was deposited below the photic zone under the influence of persistent, non...

Informing and involving: the community`s right to know [marine oil spills

Energy Technology Data Exchange (ETDEWEB)

Watson, G. [Marine and Coastal Community Network, Perth, WA (Australia)

1996-12-31

The Marine and Coastal Community Network was established in 1993 to facilitate communication between all user groups of Australia`s coasts and seas, to promote ecological sustainability, to encourage greater community involvement, and to provide information. It is proving successful in providing a line of communication between a broad range of sectorial interests and developing a cooperative approach to ecological sustainability. This paper addresses the question of how the oil industry is shaping up in relation to providing relevant, accessible, understandable and up-to-date information to the community, in involving the community, and in developing and delivering industry best practice. It also outlines what the community wants to know and what industry can do better. The community, it is concluded, is always going to react very strongly over oil spills. Maintenance of water quality and the conservation of Australia`s coastline are extremely important issues for the community. A greater willingness to involve the community and a greater commitment to better research and practices is considered necessary. (author). 1 tab., 1 fig., 20 refs.

Optimal processing pathway for the production of biodiesel from microalgal biomass: A superstructure based approach

DEFF Research Database (Denmark)

Rizwan, Muhammad; Lee, Jay H.; Gani, Rafiqul

2013-01-01

In this study, we propose a mixed integer nonlinear programming (MINLP) model for superstructure based optimization of biodiesel production from microalgal biomass. The proposed superstructure includes a number of major processing steps for the production of biodiesel from microalgal biomass......, such as the harvesting of microalgal biomass, pretreatments including drying and cell disruption of harvested biomass, lipid extraction, transesterification, and post-transesterfication purification. The proposed model is used to find the optimal processing pathway among the large number of potential pathways that exist...... for the production of biodiesel from microalgae. The proposed methodology is tested by implementing on a specific case with different choices of objective functions. The MINLP model is implemented and solved in GAMS using a database built in Excel. The results from the optimization are analyzed...

Succession and physiological health of freshwater microalgal fouling in a Tasmanian hydropower canal.

Science.gov (United States)

Perkins, Kathryn J; Andrewartha, Jessica M; McMinn, Andrew; Cook, Suellen S; Hallegraeff, Gustaaf M

2010-08-01

Freshwater microalgal biofouling in hydropower canals in Tarraleah, Tasmania, is dominated by a single diatom species, Gomphonema tarraleahae. The microfouling community is under investigation with the aim of reducing its impact on electricity generation. Species succession was investigated using removable glass slides. Fouled slides were examined microscopically and for chlorophyll a biomass. Chl a biomass increased steeply after 8 weeks (0.09-0.87 mg m(-2)), but increased much earlier on slides surrounded by a biofouled inoculum. Succession began with low profile diatoms such as Tabellaria flocculosa, progressing to stalked diatoms such as Gomphonema spp. and Cymbella aspera. Few chlorophytes and no filamentous algae were present. Pulse amplitude modulated fluorometry was used to measure the physiological health of fouling on the canal wall. Maximum quantum yield (F(v)/F(m)) measurements were consistently <0.18, indicating that the fouling mat consisted of dead or dying algae. The succession and physiological health of cells in the fouling community has broad implications for mitigation techniques used.

Women in the United States Marine Corps CI/HUMINT Community

National Research Council Canada - National Science Library

Reese, Jackson L

2008-01-01

The purpose of the researchers Masters of Military Arts and Science thesis is to explore the possibility of including women in the Marine Corps CI/HUMINT community without diminishing the overall unit...

Thermochemical conversion of microalgal biomass into biofuels: a review.

Science.gov (United States)

Chen, Wei-Hsin; Lin, Bo-Jhih; Huang, Ming-Yueh; Chang, Jo-Shu

2015-05-01

Following first-generation and second-generation biofuels produced from food and non-food crops, respectively, algal biomass has become an important feedstock for the production of third-generation biofuels. Microalgal biomass is characterized by rapid growth and high carbon fixing efficiency when they grow. On account of potential of mass production and greenhouse gas uptake, microalgae are promising feedstocks for biofuels development. Thermochemical conversion is an effective process for biofuel production from biomass. The technology mainly includes torrefaction, liquefaction, pyrolysis, and gasification. Through these conversion technologies, solid, liquid, and gaseous biofuels are produced from microalgae for heat and power generation. The liquid bio-oils can further be upgraded for chemicals, while the synthesis gas can be synthesized into liquid fuels. This paper aims to provide a state-of-the-art review of the thermochemical conversion technologies of microalgal biomass into fuels. Detailed conversion processes and their outcome are also addressed. Copyright © 2014 Elsevier Ltd. All rights reserved.

Global learning for local solutions: Reducing vulnerability of marine-dependent coastal communities

Science.gov (United States)

Salim, S. S.; Paytan, A.

2016-12-01

The project `Global learning for local solutions: Reducing vulnerability of marine-dependent coastal communities' (GULLS) falls within the Belmont Forum and G8 Research Councils Initiative on Multilateral Research Funding. Participants include teams from nine countries: Australia, Brazil, India, Madagascar, Mozambique, New Zealand, South Africa, the United Kingdom and the United States of America. The project focuses on five regional `hotspots' of climate and social change, defined as fast-warming marine areas and areas experiencing social tensions as a result of change: south-east Australia, Brazil, India, South Africa, and the Mozambique Channel and adjacent countries of Mozambique and Madagascar. These areas require most urgent attention and serve as valuable case studies for wider applications. The project aims to assist coastal communities and other stakeholders dependent on marine resources to adapt to climate change and variability through an integrated and trans-disciplinary approach. Combining best available global knowledge with local knowledge and conditions, it is exploring adaptation options and approaches to strengthen resilience at local and community levels, with a focus on options for reconciling the needs for food security with long-term sustainability and conservation. The project will also contribute to capacity development and empowering fishing communities and other fisheries-dependent stakeholders.A standardized vulnerability assessment framework is being developed that will be used to integrate results from natural, social and economic studies in order to identify needs and options for strengthening management and existing policies. Structured comparisons between the hot-spots will assist global efforts for adaptation and strengthening resilience in marine and coastal social-ecological systems.

European Community's program in marine resources development

International Nuclear Information System (INIS)

Lenoble, J.P.; Jarmache, E.

1995-01-01

The European Community launched already several research program in the different fields of social and industrial activities. The Fourth Framework Programme is divided into 4 main activities comporting a total of 18 programs. These programs are dealing with general topics as information and communication, industrial technologies, environment, life sciences and technologies, energy, transport and socioeconomic research. One line is devoted to marine sciences and technology, but offshore activities could also be included in the other topics as offshore oil and gas in energy, ship building and harbor in transport, aquaculture and fisheries in life sciences and technology, etc. In order to maintain a coherent approach toward offshore activities, the European maritime industries met intensively front 1991 to 1994 and recommended a series of proposal for Research and Development of marine resources. The methodology and content of these proposals is exposed

Microalgal cell disruption via ultrasonic nozzle spraying.

Science.gov (United States)

Wang, M; Yuan, W

2015-01-01

The objective of this study was to understand the effect of operating parameters, including ultrasound amplitude, spraying pressure, nozzle orifice diameter, and initial cell concentration on microalgal cell disruption and lipid extraction in an ultrasonic nozzle spraying system (UNSS). Two algal species including Scenedesmus dimorphus and Nannochloropsis oculata were evaluated. Experimental results demonstrated that the UNSS was effective in the disruption of microalgal cells indicated by significant changes in cell concentration and Nile red-stained lipid fluorescence density between all treatments and the control. It was found that increasing ultrasound amplitude generally enhanced cell disruption and lipid recovery although excessive input energy was not necessary for best results. The effect of spraying pressure and nozzle orifice diameter on cell disruption and lipid recovery was believed to be dependent on the competition between ultrasound-induced cavitation and spraying-generated shear forces. Optimal cell disruption was not always achieved at the highest spraying pressure or biggest nozzle orifice diameter; instead, they appeared at moderate levels depending on the algal strain and specific settings. Increasing initial algal cell concentration significantly reduced cell disruption efficiency. In all UNSS treatments, the effectiveness of cell disruption and lipid recovery was found to be dependent on the algal species treated.

Metabolite Profiling of the Microalgal Diatom Chaetoceros Calcitrans and Correlation with Antioxidant and Nitric Oxide Inhibitory Activities via 1H NMR-Based Metabolomics

Directory of Open Access Journals (Sweden)

Awanis Azizan

2018-05-01

Full Text Available Microalgae are promising candidate resources from marine ecology for health-improving effects. Metabolite profiling of the microalgal diatom, Chaetoceros calcitrans was conducted by using robust metabolomics tools, namely 1H nuclear magnetic resonance (NMR spectroscopy coupled with multivariate data analysis (MVDA. The unsupervised data analysis, using principal component analysis (PCA, resolved the five types of extracts made by solvents ranging from polar to non-polar into five different clusters. Collectively, with various extraction solvents, 11 amino acids, cholesterol, 6 fatty acids, 2 sugars, 1 osmolyte, 6 carotenoids and 2 chlorophyll pigments were identified. The fatty acids and both carotenoid pigments as well as chlorophyll, were observed in the extracts made from medium polar (acetone, chloroform and non-polar (hexane solvents. It is suggested that the compounds were the characteristic markers that influenced the separation between the clusters. Based on partial least square (PLS analysis, fucoxanthin, astaxanthin, violaxanthin, zeaxanthin, canthaxanthin, and lutein displayed strong correlation to 2,2-diphenyl-1-picrylhydrazyl (DPPH free radical scavenging and nitric oxide (NO inhibitory activity. This metabolomics study showed that solvent extractions are one of the main bottlenecks for the maximum recovery of bioactive microalgal compounds and could be a better source of natural antioxidants due to a high value of metabolites.

Transcriptome analyses to investigate symbiotic relationships between marine protists

Science.gov (United States)

Balzano, Sergio; Corre, Erwan; Decelle, Johan; Sierra, Roberto; Wincker, Patrick; Da Silva, Corinne; Poulain, Julie; Pawlowski, Jan; Not, Fabrice

2015-01-01

Rhizaria are an important component of oceanic plankton communities worldwide. A number of species harbor eukaryotic microalgal symbionts, which are horizontally acquired in the environment at each generation. Although these photosymbioses are determinant for Rhizaria ability to thrive in oceanic ecosystems, the mechanisms for symbiotic interactions are unclear. Using high-throughput sequencing technology (i.e., 454), we generated large Expressed Sequence Tag (EST) datasets from four uncultured Rhizaria, an acantharian (Amphilonche elongata), two polycystines (Collozoum sp. and Spongosphaera streptacantha), and one phaeodarian (Aulacantha scolymantha). We assessed the main genetic features of the host/symbionts consortium (i.e., the holobiont) transcriptomes and found rRNA sequences affiliated to a wide range of bacteria and protists in all samples, suggesting that diverse microbial communities are associated with the holobionts. A particular focus was then carried out to search for genes potentially involved in symbiotic processes such as the presence of c-type lectins-coding genes, which are proteins that play a role in cell recognition among eukaryotes. Unigenes coding putative c-type lectin domains (CTLD) were found in the species bearing photosynthetic symbionts (A. elongata, Collozoum sp., and S. streptacantha) but not in the non-symbiotic one (A. scolymantha). More particularly, phylogenetic analyses group CTLDs from A. elongata and Collozoum sp. on a distinct branch from S. streptacantha CTLDs, which contained carbohydrate-binding motifs typically observed in other marine photosymbiosis. Our data suggest that similarly to other well-known marine photosymbiosis involving metazoans, the interactions of glycans with c-type lectins is likely involved in modulation of the host/symbiont specific recognition in Radiolaria. PMID:25852650

Moving Toward Spatial Solutions in Marine Conservation with Indigenous Communities

Directory of Open Access Journals (Sweden)

Natalie C. Ban

2008-06-01

Full Text Available Community and resource user support has often been declared as essential to achieving globally agreed targets for marine protection. Given that indigenous people in Canada have resource use rights, we engaged two indigenous communities in British Columbia for their views on marine planning and protected areas. We developed a three-phased approach for executing our research: building research partnerships, carrying out individual interviews, and holding community discussion sessions. Participants expressed a common goal of recovering depleted species and ensuring the sustainability of indigenous fishing. We found strong support for spatial protection measures, and significant overlaps amongst participants in the areas suggested for protection. The most common type of protection recommended by participants was the exclusion of commercial and recreational fisheries while allowing for indigenous fishing; this stands in contrast to the emphasis on strict no-take MPAs advocated in the literature. Similarities in the goal, and level and areas of protection point to a gap in conservation approaches: the conservation of important areas and resources to indigenous people, allowing the continued practice and adaptation of their culture.

Microalgal biomass pretreatment for bioethanol production: a review

Directory of Open Access Journals (Sweden)

Jesús Velazquez-Lucio

2018-03-01

Full Text Available Biofuels derived from microalgae biomass have received a great deal of attention owing to their high potentials as sustainable alternatives to fossil fuels. Microalgae have a high capacity of CO2 fixation and depending on their growth conditions, they can accumulate different quantities of lipids, proteins, and carbohydrates. Microalgal biomass can, therefore, represent a rich source of fermentable sugars for third generation bioethanol production. The utilization of microalgal carbohydrates for bioethanol production follows three main stages: i pretreatment, ii saccharification, and iii fermentation. One of the most important stages is the pretreatment, which is carried out to increase the accessibility to intracellular sugars, and thus plays an important role in improving the overall efficiency of the bioethanol production process. Diverse types of pretreatments are currently used including chemical, thermal, mechanical, biological, and their combinations, which can promote cell disruption, facilitate extraction, and result in the modification the structure of carbohydrates as well as the production of fermentable sugars. In this review, the different pretreatments used on microalgae biomass for bioethanol production are presented and discussed. Moreover, the methods used for starch and total carbohydrates quantification in microalgae biomass are also briefly presented and compared.

Temporal Stability of the Microbial Community in Sewage-Polluted Seawater Exposed to Natural Sunlight Cycles and Marine Microbiota

Science.gov (United States)

Sassoubre, Lauren M.; Yamahara, Kevan M.

2015-01-01

Billions of gallons of untreated wastewater enter the coastal ocean each year. Once sewage microorganisms are in the marine environment, they are exposed to environmental stressors, such as sunlight and predation. Previous research has investigated the fate of individual sewage microorganisms in seawater but not the entire sewage microbial community. The present study used next-generation sequencing (NGS) to examine how the microbial community in sewage-impacted seawater changes over 48 h when exposed to natural sunlight cycles and marine microbiota. We compared the results from microcosms composed of unfiltered seawater (containing naturally occurring marine microbiota) and filtered seawater (containing no marine microbiota) to investigate the effect of marine microbiota. We also compared the results from microcosms that were exposed to natural sunlight cycles with those from microcosms kept in the dark to investigate the effect of sunlight. The microbial community composition and the relative abundance of operational taxonomic units (OTUs) changed over 48 h in all microcosms. Exposure to sunlight had a significant effect on both community composition and OTU abundance. The effect of marine microbiota, however, was minimal. The proportion of sewage-derived microorganisms present in the microcosms decreased rapidly within 48 h, and the decrease was the most pronounced in the presence of both sunlight and marine microbiota, where the proportion decreased from 85% to 3% of the total microbial community. The results from this study demonstrate the strong effect that sunlight has on microbial community composition, as measured by NGS, and the importance of considering temporal effects in future applications of NGS to identify microbial pollution sources. PMID:25576619

Applications of Microalgal Biotechnology for Disease Control in Aquaculture

Directory of Open Access Journals (Sweden)

Patai Charoonnart

2018-04-01

Full Text Available Aquaculture industries, and in particular the farming of fish and crustaceans, are major contributors to the economy of many countries and an increasingly important component in global food supply. However, the severe impact of aquatic microbial diseases on production performance remains a challenge to these industries. This article considers the potential applications of microalgal technology in the control of such diseases. At the simplest level, microalgae offer health-promoting benefits as a nutritional supplement in feed meal because of their digestibility and high content of proteins, lipids and essential nutrients. Furthermore, some microalgal species possess natural anti-microbial compounds or contain biomolecules that can serve as immunostimulants. In addition, emerging genetic engineering technologies in microalgae offer the possibility of producing ‘functional feed additives’ in which novel and specific bioactives, such as fish growth hormones, anti-bacterials, subunit vaccines, and virus-targeted interfering RNAs, are components of the algal supplement. The evaluation of such technologies for farm applications is an important step in the future development of sustainable aquaculture.

Microalgal biofactories: a promising approach towards sustainable omega-3 fatty acid production

Directory of Open Access Journals (Sweden)

Adarme-Vega T

2012-07-01

Full Text Available Abstract Omega-3 fatty acids eicosapentaenoic acid (EPA and docosahexaenoic acid (DHA provide significant health benefits and this has led to an increased consumption as dietary supplements. Omega-3 fatty acids EPA and DHA are found in animals, transgenic plants, fungi and many microorganisms but are typically extracted from fatty fish, putting additional pressures on global fish stocks. As primary producers, many marine microalgae are rich in EPA (C20:5 and DHA (C22:6 and present a promising source of omega-3 fatty acids. Several heterotrophic microalgae have been used as biofactories for omega-3 fatty acids commercially, but a strong interest in autotrophic microalgae has emerged in recent years as microalgae are being developed as biofuel crops. This paper provides an overview of microalgal biotechnology and production platforms for the development of omega-3 fatty acids EPA and DHA. It refers to implications in current biotechnological uses of microalgae as aquaculture feed and future biofuel crops and explores potential applications of metabolic engineering and selective breeding to accumulate large amounts of omega-3 fatty acids in autotrophic microalgae.

Bacterial communities in sediment of a Mediterranean marine protected area.

Science.gov (United States)

Catania, Valentina; Sarà, Gianluca; Settanni, Luca; Quatrini, Paola

2017-04-01

Biodiversity is crucial in preservation of ecosystems, and bacterial communities play an indispensable role for the functioning of marine ecosystems. The Mediterranean marine protected area (MPA) "Capo Gallo-Isola delle Femmine" was instituted to preserve marine biodiversity. The bacterial diversity associated with MPA sediment was compared with that from sediment of an adjacent harbour exposed to intense nautical traffic. The MPA sediment showed higher diversity with respect to the impacted site. A 16S rDNA clone library of the MPA sediment allowed the identification of 7 phyla: Proteobacteria (78%), Firmicutes (11%), Acidobacteria (3%), Actinobacteria (3%), Bacteroidetes (2%), Planctomycetes (2%), and Cyanobacteria (1%). Analysis of the hydrocarbon (HC)-degrading bacteria was performed using enrichment cultures. Most of the MPA sediment isolates were affiliated with Gram-positive G+C rich bacteria, whereas the majority of taxa in the harbour sediment clustered with Alpha- and Gammaproteobacteria; no Gram-positive HC degraders were isolated from the harbour sediment. Our results show that protection probably has an influence on bacterial diversity, and suggest the importance of monitoring the effects of protection at microbial level as well. This study creates a baseline of data that can be used to assess changes over time in bacterial communities associated with a Mediterranean MPA.

Strong seasonality and interannual recurrence in marine myovirus communities.

Science.gov (United States)

Pagarete, A; Chow, C-E T; Johannessen, T; Fuhrman, J A; Thingstad, T F; Sandaa, R A

2013-10-01

The temporal community dynamics and persistence of different viral types in the marine environment are still mostly obscure. Polymorphism of the major capsid protein gene, g23, was used to investigate the community composition dynamics of T4-like myoviruses in a North Atlantic fjord for a period of 2 years. A total of 160 unique operational taxonomic units (OTUs) were identified by terminal restriction fragment length polymorphism (TRFLP) of the gene g23. Three major community profiles were identified (winter-spring, summer, and autumn), which resulted in a clear seasonal succession pattern. These seasonal transitions were recurrent over the 2 years and significantly correlated with progression of seawater temperature, Synechococcus abundance, and turbidity. The appearance of the autumn viral communities was concomitant with the occurrence of prominent Synechococcus blooms. As a whole, we found a highly dynamic T4-like viral community with strong seasonality and recurrence patterns. These communities were unexpectedly dominated by a group of persistently abundant viruses.

Exploring the efficacy of wastewater-grown microalgal biomass as a biofertilizer for wheat.

Science.gov (United States)

Renuka, Nirmal; Prasanna, Radha; Sood, Anjuli; Ahluwalia, Amrik S; Bansal, Radhika; Babu, Santosh; Singh, Rajendra; Shivay, Yashbir S; Nain, Lata

2016-04-01

Microalgae possess the ability to grow and glean nutrients from wastewater; such wastewater-grown biomass can be used as a biofertilizer for crops. The present investigation was undertaken to evaluate two formulations (formulation with unicellular microalgae (MC1) and formulation with filamentous microalgae (MC2); T4 and T5, respectively), prepared using wastewater-grown microalgal biomass, as a biofertilizer (after mixing with vermiculite/compost as a carrier) in wheat crop (Triticum aestivum L. HD2967) under controlled conditions. The highest values of available nitrogen (N), phosphorus (P), and potassium (K) in soil and nitrogen-fixing potential were recorded in treatment T5 (75% N + full-dose PK + formulation with filamentous microalgae (MC2). Microbial biomass carbon was significantly enhanced by 31.8-67.0% in both the inoculated treatments over control (recommended dose of fertilizers), with highest values in T4 (75% N + full-dose PK + formulation with unicellular microalgae (MC1)). Both the microalgal formulations significantly increased the N, P, and K content of roots, shoots, and grains, and the highest total N content of 3.56% in grains was observed in treatment T5. At harvest stage, the treatments inoculated with microalgal formulations (T4 and T5) recorded a 7.4-33% increase in plant dry weight and up to 10% in spike weight. The values of 1000-grain weight showed an enhancement of 5.6-8.4%, compared with T1 (recommended doses of fertilizers). A positive correlation was observed between soil nutrient availability at mid crop stage and plant biometrical parameters at harvest stage. This study revealed the promise of such microalgal consortia as a biofertilizer for 25% N savings and improved yields of wheat crop.

Marine protected areas increase temporal stability of community structure, but not density or diversity, of tropical seagrass fish communities.

Directory of Open Access Journals (Sweden)

Elisa Alonso Aller

Full Text Available Marine protected areas (MPAs have been shown to increase long-term temporal stability of fish communities and enhance ecosystem resilience to anthropogenic disturbance. Yet, the potential ability of MPAs to buffer effects of environmental variability at shorter time scales remains widely unknown. In the tropics, the yearly monsoon cycle is a major natural force affecting marine organisms in tropical regions, and its timing and severity are predicted to change over the coming century, with potentially severe effects on marine organisms, ecosystems and ecosystem services. Here, we assessed the ability of MPAs to buffer effects of monsoon seasonality on seagrass-associated fish communities, using a field survey in two MPAs (no-take zones and two unprotected (open-access sites around Zanzibar (Tanzania. We assessed the temporal stability of fish density and community structure within and outside MPAs during three monsoon seasons in 2014-2015, and investigated several possible mechanisms that could regulate temporal stability. Our results show that MPAs did not affect fish density and diversity, but that juvenile fish densities were temporally more stable within MPAs. Second, fish community structure was more stable within MPAs for juvenile and adult fish, but not for subadult fish or the total fish community. Third, the observed effects may be due to a combination of direct and indirect (seagrass-mediated effects of seasonality and, potentially, fluctuating fishing pressure outside MPAs. In summary, these MPAs may not have the ability to enhance fish density and diversity and to buffer effects of monsoon seasonality on the whole fish community. However, they may increase the temporal stability of certain groups, such as juvenile fish. Consequently, our results question whether MPAs play a general role in the maintenance of biodiversity and ecosystem functioning under changing environmental conditions in tropical seagrass fish communities.

Scenario Analysis of Nutrient Removal from Municipal Wastewater by Microalgal Biofilms

NARCIS (Netherlands)

Boelee, N.C.; Temmink, H.; Janssen, M.; Buisman, C.J.N.; Wijffels, R.H.

2012-01-01

Microalgae can be used for the treatment of municipal wastewater. The application of microalgal biofilms in wastewater treatment systems seems attractive, being able to remove nitrogen, phosphorus and COD from wastewater at a short hydraulic retention time. This study therefore investigates the area

Assessment of environmental stresses for enhanced microalgal biofuel production-an overview

Directory of Open Access Journals (Sweden)

Dan eCheng

2014-07-01

Full Text Available Microalgal biofuels are currently considered to be the most promising alternative to future renewable energy source. Microalgae have great potential to produce various biofuels, including biodiesel, bioethanol, biomethane, and biohydrogen. Cultivation of biofuel-producing microalgae demands favorable environmental conditions, such as suitable light, temperature, nutrients, salinity, and pH. However, these conditions are not always compatible with the conditions beneficial to biofuel production, because biofuel-related compounds (such as lipids and carbohydrates tend to accumulate under environmental-stress conditions of light, temperature, nutrient, and salt. This paper presents a brief overview of the effects of environmental conditions on production of microalgal biomass and biofuel, with specific emphasis on how to utilize environmental stresses to improve biofuel productivity. The potential avenues of reaping the benefits of enhanced biofuel production by environmental stresses while maintaining high yields of biomass production have been discussed.

Comparisons of the fungal and protistan communities among different marine sponge holobionts by pyrosequencing.

Science.gov (United States)

He, Liming; Liu, Fang; Karuppiah, Valliappan; Ren, Yi; Li, Zhiyong

2014-05-01

To date, the knowledge of eukaryotic communities associated with sponges remains limited compared with prokaryotic communities. In a manner similar to prokaryotes, it could be hypothesized that sponge holobionts have phylogenetically diverse eukaryotic symbionts, and the eukaryotic community structures in different sponge holobionts were probably different. In order to test this hypothesis, the communities of eukaryota associated with 11 species of South China Sea sponges were compared with the V4 region of 18S ribosomal ribonucleic acid gene using 454 pyrosequencing. Consequently, 135 and 721 unique operational taxonomic units (OTUs) of fungi and protists were obtained at 97 % sequence similarity, respectively. These sequences were assigned to 2 phyla of fungi (Ascomycota and Basidiomycota) and 9 phyla of protists including 5 algal phyla (Chlorophyta, Haptophyta, Streptophyta, Rhodophyta, and Stramenopiles) and 4 protozoal phyla (Alveolata, Cercozoa, Haplosporidia, and Radiolaria) including 47 orders (12 fungi, 35 protists). Entorrhizales of fungi and 18 orders of protists were detected in marine sponges for the first time. Particularly, Tilletiales of fungi and Chlorocystidales of protists were detected for the first time in marine habitats. Though Ascomycota, Alveolata, and Radiolaria were detected in all the 11 sponge species, sponge holobionts have different fungi and protistan communities according to OTU comparison and principal component analysis at the order level. This study provided the first insights into the fungal and protistan communities associated with different marine sponge holobionts using pyrosequencing, thus further extending the knowledge on sponge-associated eukaryotic diversity.

Community-Level Analysis of psbA Gene Sequences and Irgarol Tolerance in Marine Periphyton▿

Science.gov (United States)

Eriksson, K. M.; Clarke, A. K.; Franzen, L.-G.; Kuylenstierna, M.; Martinez, K.; Blanck, H.

2009-01-01

This study analyzes psbA gene sequences, predicted D1 protein sequences, species relative abundance, and pollution-induced community tolerance in marine periphyton communities exposed to the antifouling compound Irgarol 1051. The mechanism of action of Irgarol is the inhibition of photosynthetic electron transport at photosystem II by binding to the D1 protein. The metagenome of the communities was used to produce clone libraries containing fragments of the psbA gene encoding the D1 protein. Community tolerance was quantified with a short-term test for the inhibition of photosynthesis. The communities were established in a continuous flow of natural seawater through microcosms with or without added Irgarol. The selection pressure from Irgarol resulted in an altered species composition and an inducted community tolerance to Irgarol. Moreover, there was a very high diversity in the psbA gene sequences in the periphyton, and the composition of psbA and D1 fragments within the communities was dramatically altered by increased Irgarol exposure. Even though tolerance to this type of compound in land plants often depends on a single amino acid substitution (Ser264→Gly) in the D1 protein, this was not the case for marine periphyton species. Instead, the tolerance mechanism likely involves increased degradation of D1. When we compared sequences from low and high Irgarol exposure, differences in nonconserved amino acids were found only in the so-called PEST region of D1, which is involved in regulating its degradation. Our results suggest that environmental contamination with Irgarol has led to selection for high-turnover D1 proteins in marine periphyton communities at the west coast of Sweden. PMID:19088321

Effects of organic pollution on biological communities of marine biofilm on hard substrata

International Nuclear Information System (INIS)

Sanz-Lázaro, C.; Fodelianakis, S.; Guerrero-Meseguer, L.; Marín, A.; Karakassis, I.

2015-01-01

We examined the effect of organic enrichment on diatom and bacterial assemblages of marine epilithic biofilms on two locations in the Mediterranean, one situated in Spain and the other in Greece. Total organic carbon, total organic nitrogen, stable isotopes (δ 13 C and δ 15 N) and chlorophyll a indicated significant incorporation of organic wastes, increased primary production and trophic niche modifications on the biofilms close to the organic enrichment source. In Spain, where the organic load was higher than in Greece, diatom and, to some extent, bacterial assemblages varied following the organic enrichment gradient. The taxonomic richness of diatom and bacterial communities was not influenced by organic enrichment. Classical community parameters showed consistent patterns to organic pollution in both locations, whereas community assemblages were only influenced when organic pollution was greatest. The successional patterns of these communities were similar to other epilithic communities. The modification of community assemblages induced by organic pollution may affect ecological functions. - Highlights: • We examined the effect of organic enrichment on assemblages of marine biofilms. • Classical community parameters showed consistent patterns to organic pollution. • Diatom and bacterial assemblages were affected under high level of organic enrichment. • Successional patterns were similar to other communities inhabiting hard substrata. • Assemblage modifications induced by organic pollution may affect ecological functions. - Organic pollution modifies the assemblages of biofilm communities which may affect important ecological functions

Local Stakeholder Perception on Community Participation in Marine Protected Area Management: A Q-Method Approach

Science.gov (United States)

Megat Jamual Fawaeed, P. S.; Daim, M. S.

2018-02-01

Local stakeholder involvement in Marine Protected Area (MPA) management can bring to a successful MPA. Generally, participatory research in marine protected area management is exploring the relationship between marine protected area management approach adopted by the management agencies and the level of participation of local stakeholder whom reside within the marine protected areas. However, the scenario of local community participation in MPA management in Malaysia seems discouraging and does not align with the International Aichi Biodiversity Target 2020. In order to achieve the International Aichi Biodiversity Target 2020, this paper attempts to explore the methodology on participatory research towards the local stakeholder of Pulau Perhentian Marine Park (PPMP), Terengganu, Malaysia. A Q-methodology is used to investigate the perspective of local stakeholder who represents different stances on the issues, by having participants rank and sort a series of statements by comply quantitative and qualitative method in collecting the data. A structured questionnaire will be employed across this study by means of face-to-face interview. In total, 210 respondents from Kampung Pasir Hantu are randomly selected. Meanwhile, a workshop with the agency (Department of Marine Park) had been held to discuss about the issues faces on behalf of management that manage the PPMP. Using the Q-method, researcher acknowledged wise viewpoints, reflecting how different stakeholders’ perception and opinion about community participation with highlights the current level of community participation in MPA. Thus, this paper describes the phases involved in this study, methodology and analysis used in making a conclusion .

Light requirements in microalgal photobioreactors. An overview of biophotonic aspects

Energy Technology Data Exchange (ETDEWEB)

Carvalho, Ana P. [Universidade Catolica Portuguesa, Porto (Portugal). CBQF/Escola Superior de Biotecnologia; Silva, Susana O. [Universidade Catolica Portuguesa, Porto (Portugal). CBQF/Escola Superior de Biotecnologia; INESC Porto, Porto (Portugal); Baptista, Jose M. [INESC Porto, Porto (Portugal); Universidade da Madeira, Funchal (Portugal). Centro de Competencia de Ciencias Exactas e de Engenharia; Malcata, F. Xavier [ISMAI - Instituto Superior da Maia, Avioso S. Pedro (Portugal); Universidade Nova de Lisboa, Oeiras (Portugal). Inst. de Tecnologia Quimica e Biologica

2011-03-15

In order to enhance microalgal growth in photobioreactors (PBRs), light requirement is one of the most important parameters to be addressed; light should indeed be provided at the appropriate intensity, duration, and wavelength. Excessive intensity may lead to photo-oxidation and -inhibition, whereas low light levels will become growth-limiting. The constraint of light saturation may be overcome via either of two approaches: increasing photosynthetic efficiency by genetic engineering, aimed at changing the chlorophyll antenna size; or increasing flux tolerance, via tailoring the photonic spectrum, coupled with its intensity and temporal characteristics. These approaches will allow an increased control over the illumination features, leading to maximization of microalgal biomass and metabolite productivity. This minireview briefly introduces the nature of light, and describes its harvesting and transformation by microalgae, as well as its metabolic effects under excessively low or high supply. Optimization of the photosynthetic efficiency is discussed under the two approaches referred to above; the selection of light sources, coupled with recent improvements in light handling by PBRs, are chronologically reviewed and critically compared. (orig.)

The Power of Computer-aided Tomography to Investigate Marine Benthic Communities

Science.gov (United States)

Utilization of Computer-aided-Tomography (CT) technology is a powerful tool to investigate benthic communities in aquatic systems. In this presentation, we will attempt to summarize our 15 years of experience in developing specific CT methods and applications to marine benthic co...

Microalgal carbohydrates. An overview of the factors influencing carbohydrates production, and of main bioconversion technologies for production of biofuels

Energy Technology Data Exchange (ETDEWEB)

Markou, Giorgos; Georgakakis, Dimitris [Agricultural Univ. of Athens (Greece). Dept. of Natural Resources Management and Agricultural Engineering; Angelidaki, Irini [Technical Univ. of Denmark, Lyngby (Denmark). Dept. of Environmental Engineering

2012-11-15

Microalgal biomass seems to be a promising feedstock for biofuel generation. Microalgae have relative high photosynthetic efficiencies, high growth rates, and some species can thrive in brackish water or seawater and wastewater from the food- and agro-industrial sector. Today, the main interest in research is the cultivation of microalgae for lipids production to generate biodiesel. However, there are several other biological or thermochemical conversion technologies, in which microalgal biomass could be used as substrate. However, the high protein content or the low carbohydrate content of the majority of the microalgal species might be a constraint for their possible use in these technologies. Moreover, in the majority of biomass conversion technologies, carbohydrates are the main substrate for production of biofuels. Nevertheless, microalgae biomass composition could be manipulated by several cultivation techniques, such as nutrient starvation or other stressed environmental conditions, which cause the microalgae to accumulate carbohydrates. This paper attempts to give a general overview of techniques that can be used for increasing the microalgal biomass carbohydrate content. In addition, biomass conversion technologies, related to the conversion of carbohydrates into biofuels are discussed. (orig.)

Assessment of Environmental Stresses for Enhanced Microalgal Biofuel Production – An Overview

International Nuclear Information System (INIS)

Cheng, Dan; He, Qingfang

2014-01-01

Microalgal biofuels are currently considered to be the most promising alternative to future renewable energy source. Microalgae have great potential to produce various biofuels, including biodiesel, bioethanol, biomethane, and biohydrogen. Cultivation of biofuel-producing microalgae demands favorable environmental conditions, such as suitable light, temperature, nutrients, salinity, and pH. However, these conditions are not always compatible with the conditions beneficial to biofuel production, because biofuel-related compounds (such as lipids and carbohydrates) tend to accumulate under environmental-stress conditions of light, temperature, nutrient, and salt. This paper presents a brief overview of the effects of environmental conditions on production of microalgal biomass and biofuel, with specific emphasis on how to utilize environmental stresses to improve biofuel productivity. The potential avenues of reaping the benefits of enhanced biofuel production by environmental stresses while maintaining high yields of biomass production have been discussed.

Assessment of Environmental Stresses for Enhanced Microalgal Biofuel Production – An Overview

Energy Technology Data Exchange (ETDEWEB)

Cheng, Dan, E-mail: dxcheng@ualr.edu; He, Qingfang, E-mail: dxcheng@ualr.edu [Department of Applied Science, University of Arkansas at Little Rock, Little Rock, AR (United States)

2014-07-07

Microalgal biofuels are currently considered to be the most promising alternative to future renewable energy source. Microalgae have great potential to produce various biofuels, including biodiesel, bioethanol, biomethane, and biohydrogen. Cultivation of biofuel-producing microalgae demands favorable environmental conditions, such as suitable light, temperature, nutrients, salinity, and pH. However, these conditions are not always compatible with the conditions beneficial to biofuel production, because biofuel-related compounds (such as lipids and carbohydrates) tend to accumulate under environmental-stress conditions of light, temperature, nutrient, and salt. This paper presents a brief overview of the effects of environmental conditions on production of microalgal biomass and biofuel, with specific emphasis on how to utilize environmental stresses to improve biofuel productivity. The potential avenues of reaping the benefits of enhanced biofuel production by environmental stresses while maintaining high yields of biomass production have been discussed.

Aerobic treatment of swine manure to enhance anaerobic digestion and microalgal cultivation.

Science.gov (United States)

Bekoe, Dominic; Wang, Lijun; Zhang, Bo; Scott Todd, Matthew; Shahbazi, Abolghasem

2018-02-01

Aerobic treatment of swine manure was coupled with anaerobic digestion and microalgal cultivation. A 14-day aerobic treatment reduced the total solid content of swine manure by >15%. Ammonia and carbon dioxide were stripped by the air supplied, and this off-gas was further used to aerate the culture of Chlorella vulgaris. The microalgal growth rates in Bristol medium and the wastewater with the off-gas increased from 0.08 to 0.22 g/L/d and from 0.15 to 0.24 g/L/d, respectively. Meanwhile, the aerobically treated swine manure showed a higher methane yield during anaerobic digestion. The experimental results were used to establish a demonstration unit consisting of a 100 L composter, a 200 L anaerobic digester, a 60 L tubular photobioreactor, and a 300 L micro-open raceway pond.

Two-step microalgal biodiesel production using acidic catalyst generated from pyrolysis-derived bio-char

International Nuclear Information System (INIS)

Dong, Tao; Gao, Difeng; Miao, Chao; Yu, Xiaochen; Degan, Charles; Garcia-Pérez, Manuel; Rasco, Barbara; Sablani, Shyam S.; Chen, Shulin

2015-01-01

Highlights: • Highly active catalyst was prepared using bio-char co-produced in Auger pyrolysis. • Catalyst inhibitors in crude oil were effectively removed by a practical refinery process. • Free fatty acids (FFA) content in refined microalgal oil was reduced to less than 0.5%. • A total fatty acid methyl ester (FAME) yield of 99% was obtained via a two-step process. • The inexpensive bio-char catalyst is superior to Amberlyst-15 in pre-esterification. - Abstract: An efficient process for biodiesel production from fast-refined microalgal oil was demonstrated. A low cost catalyst prepared from pyrolysis-derived bio-char, was applied in pre-esterification to reduce free fatty acid (FFA) content. Results showed that the bio-char catalyst was highly active in esterification; however, the performance of the catalyst significantly reduced when crude microalgal oil was used as feedstock. To solve the problem caused by catalyst-fouling, a fast and scalable crude oil refinery procedure was carried out to remove chlorophyll and phospholipids that might degrade the catalyst and the quality of biodiesel. The activity and reusability of bio-char catalyst were remarkably improved in the fast-refined oil. FFA content in the refined microalgal oil was reduced to less than 0.5% after pre-esterification. The bio-char catalyst could be reused for 10 cycles without dramatic loss in activity. The pre-esterification fits the first-order kinetic reaction with activation energy of 42.16 kJ/mol. The activity of bio-char catalyst was superior to commercial Amberlyst-15 under the same reaction condition. A total fatty acid methyl ester (FAME, namely biodiesel) yield of 99% was obtained following the second-step CaO-catalyzed transesterification. The cost-effective bio-char catalyst has great potential for biodiesel production using feedstocks having high FFA content.

Microalgal carbohydrates: an overview of the factors influencing carbohydrates production, and of main bioconversion technologies for production of biofuels

DEFF Research Database (Denmark)

Markou, Giorgos; Angelidaki, Irini; Georgakakis, Dimitris

2012-01-01

in research is the cultivation of microalgae for lipids production to generate biodiesel. However, there are several other biological or thermochemical conversion technologies, in which microalgal biomass could be used as substrate. However, the high protein content or the low carbohydrate content...... of the majority of the microalgal species might be a constraint for their possible use in these technologies. Moreover, in the majority of biomass conversion technologies, carbohydrates are the main substrate for production of biofuels. Nevertheless, microalgae biomass composition could be manipulated by several......Microalgal biomass seems to be a promising feedstock for biofuel generation. Microalgae have relative high photosynthetic efficiencies, high growth rates, and some species can thrive in brackish water or seawater and wastewater from the food- and agro-industrial sector. Today, the main interest...

A simple, reproducible and sensitive spectrophotometric method to estimate microalgal lipids

Energy Technology Data Exchange (ETDEWEB)

Chen Yimin [ChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Sheffield S1 3JD (United Kingdom); Vaidyanathan, Seetharaman, E-mail: s.vaidyanathan@sheffield.ac.uk [ChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Sheffield S1 3JD (United Kingdom)

2012-04-29

Highlights: Black-Right-Pointing-Pointer FAs released from lipids form complex with Cu-TEA in chloroform. Black-Right-Pointing-Pointer The FA-Cu-TEA complex gives strong absorbance at 260 nm. Black-Right-Pointing-Pointer The absorbance is sensitive and independent of C-atom number in the FAs (10-18). Black-Right-Pointing-Pointer Microalgal lipid extract and pure FA (such as C16) can both be used as standards. - Abstract: Quantification of total lipids is a necessity for any study of lipid production by microalgae, especially given the current interest in microalgal carbon capture and biofuels. In this study, we employed a simple yet sensitive method to indirectly measure the lipids in microalgae by measuring the fatty acids (FA) after saponification. The fatty acids were reacted with triethanolamine-copper salts (TEA-Cu) and the ternary TEA-Cu-FA complex was detected at 260 nm using a UV-visible spectrometer without any colour developer. The results showed that this method could be used to analyse low levels of lipids in the range of nano-moles from as little as 1 mL of microalgal culture. Furthermore, the structure of the TEA-Cu-FA complex and related reaction process are proposed to better understand this assay. There is no special instrument required and the method is very reproducible. To the best of our knowledge, this is the first report of the use of UV absorbance of copper salts with FA as a method to estimate lipids in algal cultures. It will pave the way for a more convenient assay of lipids in microalgae and can readily be expanded for estimating lipids in other biological systems.

A simple, reproducible and sensitive spectrophotometric method to estimate microalgal lipids

International Nuclear Information System (INIS)

Chen Yimin; Vaidyanathan, Seetharaman

2012-01-01

Highlights: ► FAs released from lipids form complex with Cu–TEA in chloroform. ► The FA–Cu–TEA complex gives strong absorbance at 260 nm. ► The absorbance is sensitive and independent of C-atom number in the FAs (10–18). ► Microalgal lipid extract and pure FA (such as C16) can both be used as standards. - Abstract: Quantification of total lipids is a necessity for any study of lipid production by microalgae, especially given the current interest in microalgal carbon capture and biofuels. In this study, we employed a simple yet sensitive method to indirectly measure the lipids in microalgae by measuring the fatty acids (FA) after saponification. The fatty acids were reacted with triethanolamine–copper salts (TEA–Cu) and the ternary TEA–Cu–FA complex was detected at 260 nm using a UV–visible spectrometer without any colour developer. The results showed that this method could be used to analyse low levels of lipids in the range of nano-moles from as little as 1 mL of microalgal culture. Furthermore, the structure of the TEA–Cu–FA complex and related reaction process are proposed to better understand this assay. There is no special instrument required and the method is very reproducible. To the best of our knowledge, this is the first report of the use of UV absorbance of copper salts with FA as a method to estimate lipids in algal cultures. It will pave the way for a more convenient assay of lipids in microalgae and can readily be expanded for estimating lipids in other biological systems.

Patterns and drivers of fish community assembly in a large marine ecosystem

DEFF Research Database (Denmark)

Pécuchet, Lauréne; Törnroos, Anna; Lindegren, Martin

2016-01-01

. To determine assembly rules, ecological similarities of co-occurring species are often investigated. This can be evaluated using trait-based indices summarizing the species’ niches in a given community. In order to investigate the underlying processes shaping community assembly in marine ecosystems, we...... investigated the patterns and drivers of fish community composition in the Baltic Sea, a semi-enclosed sea characterized by a pronounced environmental gradient. Our results showed a marked decline in species- and functional richness, largely explained by decreasing salinities. In addition, habitat complexity...

Divergent ecosystem responses within a benthic marine community to ocean acidification.

Science.gov (United States)

Kroeker, Kristy J; Micheli, Fiorenza; Gambi, Maria Cristina; Martz, Todd R

2011-08-30

Ocean acidification is predicted to impact all areas of the oceans and affect a diversity of marine organisms. However, the diversity of responses among species prevents clear predictions about the impact of acidification at the ecosystem level. Here, we used shallow water CO(2) vents in the Mediterranean Sea as a model system to examine emergent ecosystem responses to ocean acidification in rocky reef communities. We assessed in situ benthic invertebrate communities in three distinct pH zones (ambient, low, and extreme low), which differed in both the mean and variability of seawater pH along a continuous gradient. We found fewer taxa, reduced taxonomic evenness, and lower biomass in the extreme low pH zones. However, the number of individuals did not differ among pH zones, suggesting that there is density compensation through population blooms of small acidification-tolerant taxa. Furthermore, the trophic structure of the invertebrate community shifted to fewer trophic groups and dominance by generalists in extreme low pH, suggesting that there may be a simplification of food webs with ocean acidification. Despite high variation in individual species' responses, our findings indicate that ocean acidification decreases the diversity, biomass, and trophic complexity of benthic marine communities. These results suggest that a loss of biodiversity and ecosystem function is expected under extreme acidification scenarios.

Marine fish community structure and habitat associations on the Canadian Beaufort shelf and slope

Science.gov (United States)

Majewski, Andrew R.; Atchison, Sheila; MacPhee, Shannon; Eert, Jane; Niemi, Andrea; Michel, Christine; Reist, James D.

2017-03-01

Marine fishes in the Canadian Beaufort Sea have complex interactions with habitats and prey, and occupy a pivotal position in the food web by transferring energy between lower- and upper-trophic levels, and also within and among habitats (e.g., benthic-pelagic coupling). The distributions, habitat associations, and community structure of most Beaufort Sea marine fishes, however, are unknown thus precluding effective regulatory management of emerging offshore industries in the region (e.g., hydrocarbon development, shipping, and fisheries). Between 2012 and 2014, Fisheries and Oceans Canada conducted the first baseline survey of offshore marine fishes, their habitats, and ecological relationships in the Canadian Beaufort Sea. Benthic trawling was conducted at 45 stations spanning 18-1001 m depths across shelf and slope habitats. Physical oceanographic variables (depth, salinity, temperature, oxygen), biological variables (benthic chlorophyll and integrated water-column chlorophyll) and sediment composition (grain size) were assessed as potential explanatory variables for fish community structure using a non-parametric statistical approach. Selected stations were re-sampled in 2013 and 2014 for a preliminary assessment of inter-annual variability in the fish community. Four distinct fish assemblages were delineated on the Canadian Beaufort Shelf and slope: 1) Nearshore-shelf: 50 and ≤200 m depths, 3) Upper-slope: ≥200 and ≤500 m depths, and 4) Lower-slope: ≥500 m depths. Depth was the environmental variable that best explained fish community structure, and each species assemblage was spatially associated with distinct aspects of the vertical water mass profile. Significant differences in the fish community from east to west were not detected, and the species composition of the assemblages on the Canadian Beaufort Shelf have not changed substantially over the past decade. This community analysis provides a framework for testing hypotheses regarding the trophic

Large-scale assessment of benthic communities across multiple marine protected areas using an autonomous underwater vehicle.

Science.gov (United States)

Ferrari, Renata; Marzinelli, Ezequiel M; Ayroza, Camila Rezende; Jordan, Alan; Figueira, Will F; Byrne, Maria; Malcolm, Hamish A; Williams, Stefan B; Steinberg, Peter D

2018-01-01

Marine protected areas (MPAs) are designed to reduce threats to biodiversity and ecosystem functioning from anthropogenic activities. Assessment of MPAs effectiveness requires synchronous sampling of protected and non-protected areas at multiple spatial and temporal scales. We used an autonomous underwater vehicle to map benthic communities in replicate 'no-take' and 'general-use' (fishing allowed) zones within three MPAs along 7o of latitude. We recorded 92 taxa and 38 morpho-groups across three large MPAs. We found that important habitat-forming biota (e.g. massive sponges) were more prevalent and abundant in no-take zones, while short ephemeral algae were more abundant in general-use zones, suggesting potential short-term effects of zoning (5-10 years). Yet, short-term effects of zoning were not detected at the community level (community structure or composition), while community structure varied significantly among MPAs. We conclude that by allowing rapid, simultaneous assessments at multiple spatial scales, autonomous underwater vehicles are useful to document changes in marine communities and identify adequate scales to manage them. This study advanced knowledge of marine benthic communities and their conservation in three ways. First, we quantified benthic biodiversity and abundance, generating the first baseline of these benthic communities against which the effectiveness of three large MPAs can be assessed. Second, we identified the taxonomic resolution necessary to assess both short and long-term effects of MPAs, concluding that coarse taxonomic resolution is sufficient given that analyses of community structure at different taxonomic levels were generally consistent. Yet, observed differences were taxa-specific and may have not been evident using our broader taxonomic classifications, a classification of mid to high taxonomic resolution may be necessary to determine zoning effects on key taxa. Third, we provide an example of statistical analyses and

Viruses in the marine environment: community dynamics, phage-host interactions and genomic structure

OpenAIRE

Lara de la Casa, Elena

2014-01-01

There are an estimated 1030 viruses in the world oceans, the majority of which are phages (viruses that infect bacteria). Extensive research has demonstrated the significant influence of marine phages on microbial abundance, community structure, genetic exchange and global biogeochemical cycles. In this thesis, we contribute to increase the knowledge about the ecological role of viruses in marine systems, but also we aimed to provide a better understanding about the interactions between phage...

Effect of the nutritional status of semi-continuous microalgal cultures on the productivity and biochemical composition of Brachionus plicatilis.

Science.gov (United States)

Ferreira, Martiña; Seixas, Pedro; Coutinho, Paula; Fábregas, Jaime; Otero, Ana

2011-12-01

The rotifer Brachionus plicatilis was cultured using the microalga Isochrysis aff. galbana clone T-ISO as feed. T-ISO was cultured semi-continuously with daily renewal rates of 10%, 20%, 30%, 40%, and 50% of the volume of cultures. The increase of renewal rate led to increasing nutrient and light availability in microalgal cultures, which caused differences in the biochemical composition of microalgal biomass. Growth rate, individual dry weight, organic content, and biomass productivity of rotifer cultures increased in response to higher growth rate in T-ISO cultures. Rotifer growth rate showed a strong negative correlation (R² = 0.90) with the C/N ratio of microalgal biomass. Rotifer dry weight was also affected by nutrient availability of T-ISO cultures, increasing up to 50% from nutrient-limited to nutrient-sufficient conditions. Consequently, biomass productivity of rotifer cultures increased more than twofold with the increase of renewal rate of T-ISO cultures. Rotifer organic content underwent the same trend of total dry weight. Maximum content of polyunsaturated fatty acids was reached in rotifers fed T-ISO from the renewal rate of 40%, with percentages of docosahexaenoic acid (22:6ω-3, DHA) and eicosapentaenoic acid (20:5ω-3, EPA) of 11% and 5% of total fatty acids, respectively. Selecting the most appropriate conditions for microalgal culture can therefore enhance the nutritive quality of microalgal biomass, resulting in a better performance of filter feeders and their nutrient content, and may constitute a useful tool to improve the rearing of fish larvae and other aquaculture organisms that require live feed in some or all the stages of their life cycle.

Advances in photobioreactors for intensive microalgal production: configurations, operating strategies and applications

NARCIS (Netherlands)

Olivieri, G.; Salatino, P.; Marzocchella, A.

2014-01-01

Over the past ten years a great deal of literature has focused on the biotechnological potential of microalgal commercial applications, mainly in the field of biofuel production. However, the biofuel production is not yet competitive, mainly due to the incidence of the photobioreactor technology on

Marine harmful algal blooms, human health and wellbeing: challenges and opportunities in the 21st century

Science.gov (United States)

BERDALET, ELISA; FLEMING, LORA E.; GOWEN, RICHARD; DAVIDSON, KEITH; HESS, PHILIPP; BACKER, LORRAINE C.; MOORE, STEPHANIE K.; HOAGLAND, PORTER; ENEVOLDSEN, HENRIK

2015-01-01

Microalgal blooms are a natural part of the seasonal cycle of photosynthetic organisms in marine ecosystems. They are key components of the structure and dynamics of the oceans and thus sustain the benefits that humans obtain from these aquatic environments. However, some microalgal blooms can cause harm to humans and other organisms. These harmful algal blooms (HABs) have direct impacts on human health and negative influences on human wellbeing, mainly through their consequences to coastal ecosystem services (fisheries, tourism and recreation) and other marine organisms and environments. HABs are natural phenomena, but these events can be favoured by anthropogenic pressures in coastal areas. Global warming and associated changes in the oceans could affect HAB occurrences and toxicity as well, although forecasting the possible trends is still speculative and requires intensive multidisciplinary research. At the beginning of the 21st century, with expanding human populations, particularly in coastal and developing countries, mitigating HABs impacts on human health and wellbeing is becoming a more pressing public health need. The available tools to address this global challenge include maintaining intensive, multidisciplinary and collaborative scientific research, and strengthening the coordination with stakeholders, policymakers and the general public. Here we provide an overview of different aspects of the HABs phenomena, an important element of the intrinsic links between oceans and human health and wellbeing. PMID:26692586

Metabolic engineering of microalgal based biofuel production: prospects and challenges

Directory of Open Access Journals (Sweden)

Chiranjib eBanerjee

2016-03-01

Full Text Available The current scenario in renewable energy is focused on development of alternate and sustainable energy sources, amongst which microalgae stands as one of the promising feedstock for biofuel production. It is well known that microalgae generate much larger amounts of biofuels in a shorter time than other sources based on plant seeds. However, the greatest challenge in a transition to algae-based biofuel production is the various other complications involved in microalgal cultivation, its harvesting, concentration, drying and lipid extraction. Several green microalgae accumulate lipids, especially triacylglycerols (TAGs, which are main precursors in the production of lipid. The various aspects on metabolic pathway analysis of an oleaginous microalgae i.e. Chlamydomonas reinhardtii have elucidated some novel metabolically important genes and this enhances the lipid production in this microalgae. Adding to it, various other aspects in metabolic engineering using OptFlux and effectual bioprocess design also gives an interactive snapshot of enhancing lipid production which ultimately improvises the oil yield. This article reviews the current status of microalgal based technologies for biofuel production, bioreactor process design, flux analysis and it also provides various strategies to increase lipids accumulation via metabolic engineering.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem

2016-06-27

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

Science.gov (United States)

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Fernández de Puelles, María L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Veríssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-06-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Ferná ndez de Puelles, Marí a L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Verí ssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-01-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

SIMULATION OF MICROALGAL GROWTH IN A CONTINUOUS PHOTOBIOREACTOR WITH SEDIMENTATION AND PARTIAL BIOMASS RECYCLING

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C. E. de Farias Silva

Full Text Available Abstract Microalgae are considered as promising feedstocks for the third generation of biofuels. They are autotrophic organisms with high growth rate and can stock an enormous quantity of lipids (about 20 - 40% of their dried cellular weight. This work was aimed at studying the cultivation of Scenedesmus obliquus in a two-stage system composed of a photobioreactor and a settler to concentrate and partially recycle the biomass as a way to enhance the microalgae cellular productivity. It was attempted to specify by simulation and experimental data a relationship between the recycling rate, kinetic parameters of microalgal growth and photobioreactor operating conditions. Scenedesmus obliquus cells were cultivated in a lab-scale flat-plate reactor, homogenized by aeration, and running in continuous flow with a residence time of 1.66 day. Experimental data for the microalgal growth were used in a semi-empirical simulation model. The best results were obtained for Fw=0.2FI, when R = 1 and kd = 0 and 0.05 day-1, with the biomass production in the reactor varying between 8 g L -1 and 14 g L-1, respectively. The mathematical model fitted to the microalgal growth experimental data was appropriate for predicting the efficiency of the reactor in producing Scenedesmus obliquus cells, establishing a relation between cellular productivity and the minimum recycling rate that must be used in the system.

Nile Red Staining for Oil Determination in Microalgal Cells: A New Insight through Statistical Modelling

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Ronald Halim

2015-01-01

Full Text Available In the wake of global warming and rapid fossil fuel depletion, microalgae emerge as promising feedstocks for sustainable biofuel production. Nile red staining acts as a rapid diagnostic tool to measure the amount of biodiesel-convertible lipid that the cells accumulate. There is a need for the development of a more uniform staining procedure. In its first phase, this study examined the dependence of microalgal Nile red fluorescence (Tetraselmis suecica in terms of its most pertinent staining variables. A quadratic surface model that successfully described the Nile red fluorescence intensity as a composite function of its variables was generated (r2=0.86. Cell concentration was shown to have a significant effect on the fluorescence intensity. Up to a certain threshold, fluorescence intensity was shown to increase with Nile red dye concentration. In its second phase, the study reviewed findings from previous Nile red studies to elucidate some of the fundamental mechanism underlying the diffusion of Nile red dye molecules into the microalgal cells and their subsequent interaction with intracellular lipids. Through the review process, we were able to develop a simple framework that provided a set of guidelines for the standardization of the Nile red staining procedure across different microalgal species.

Modeling Microalgal Biosediment Formation Based on Attenuated Total Reflection Fourier Transform Infrared (ATR FT-IR) Monitoring.

Science.gov (United States)

Ogburn, Zachary L; Vogt, Frank

2018-03-01

With increasing amounts of anthropogenic pollutants being released into ecosystems, it becomes ever more important to understand their fate and interactions with living organisms. Microalgae play an important ecological role as they are ubiquitous in marine environments and sequester inorganic pollutants which they transform into organic biomass. Of particular interest in this study is their role as a sink for atmospheric CO 2 , a greenhouse gas, and nitrate, one cause of harmful algal blooms. Novel chemometric hard-modeling methodologies have been developed for interpreting phytoplankton's chemical and physiological adaptations to changes in their growing environment. These methodologies will facilitate investigations of environmental impacts of anthropogenic pollutants on chemical and physiological properties of marine microalgae (here: Nannochloropsis oculata). It has been demonstrated that attenuated total reflection Fourier transform infrared (ATR FT-IR) spectroscopy can gain insights into both and this study only focuses on the latter. From time-series of spectra, the rate of microalgal biomass settling on top of a horizontal ATR element is derived which reflects several of phytoplankton's physiological parameters such as growth rate, cell concentrations, cell size, and buoyancy. In order to assess environmental impacts on such parameters, microalgae cultures were grown under 25 different chemical scenarios covering 200-600 ppm atmospheric CO 2 and 0.35-0.75 mM dissolved NO 3 - . After recording time-series of ATR FT-IR spectra, a multivariate curve resolution-alternating least squares (MCR-ALS) algorithm extracted spectroscopic and time profiles from each data set. From the time profiles, it was found that in the considered concentration ranges only NO 3 - has an impact on the cells' physiological properties. In particular, the cultures' growth rate has been influenced by the ambient chemical conditions. Thus, the presented spectroscopic�

Effects of co-products on the life-cycle impacts of microalgal biodiesel.

Science.gov (United States)

Soratana, Kullapa; Barr, William J; Landis, Amy E

2014-05-01

Microalgal biodiesel production has been investigated for decades, yet it is not commercially available. Part of the problem is that the production process is energy and chemical intensive due, in part, to the high portion of microalgal biomass left as residues. This study investigated cradle-to-gate life-cycle environmental impacts from six different scenarios of microalgal biodiesel and its co-products. Ozone depletion, global warming, photochemical smog formation, acidification and eutrophication potentials were assessed using the Tool for the Reduction and Assessment of Chemical and other environmental Impacts (TRACI). Monte Carlo Analysis was conducted to investigate the processes with major contribution in each impact category. The market opportunity for each co-product was examined based on supply, demand and prices of the products that could potentially be substituted by the co-products. The results indicated that the scenario with the least life-cycle environmental impacts in all the five impact categories with the highest net energy ratio was the scenario utilizing a multitude of co-products including bioethanol from lipid-extracted microalgae (LEA), biomethane (to produce electricity and heat) from simultaneous saccharification-fermentation (SSF) residues, land-applied material from SSF residue anaerobic digestion (AD) solid digestate, recycling nutrients from SSF residue AD liquid digestate and CO2 recovered from SSF process contributed. Decreasing the energy consumption of the centrifuge in the land-applied material production process and increasing the lipid content of microalgae can reduce environmental footprints of the co-products. The same scenario also had the highest total income indicating their potential as co-products in the market. Copyright © 2014 Elsevier Ltd. All rights reserved.

Structure of macroalgal communities on tropical rocky shores inside and outside a marine protected area.

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Portugal, Adriana Brizon; Carvalho, Fabrício Lopes; Soares, Marcelo de Oliveira; Horta, Paulo Antunes; de Castro Nunes, José Marcos

2017-09-01

The structure of marine macroalgal communities and morpho-functional groups were investigated in a poorly characterized region on the Tropical Southwestern Atlantic coast, Brazil. The survey was conducted at six rocky shores located on the mainland and on coastal islands distributed inside a marine protected area (MPA) and outside the MPA (near a densely populated area). We hypothesized that tropical rocky shores inside the MPA and islands have higher species richness, diversity, and evenness of marine macroalgae. Results confirmed that species richness, diversity and evenness were significantly higher inside the MPA than in rocky shores outside the MPA. Only species richness was higher on islands than on the mainland. The results suggest that human impacts could lead to a competitive advantage and dominance in the articulated calcareous morphotype, resulting in community differences and lower benthic biodiversity in tropical ecosystems near urbanized sites. Copyright © 2017 Elsevier Ltd. All rights reserved.

Resource Assessment for Microalgal/Emergent Aquatic Biomass Systems in the Arid Southwest: Final Report

Energy Technology Data Exchange (ETDEWEB)

Vigon, B. W.; Arthur, M. F.; Taft, L. G.; Wagner, C. K.; Lipinsky, E. S.; Litchfield, J. H.; McCandlish, C. D.; Clark, R.

1982-12-23

This research project has been designed to facilitate the eventual selection of biomass production systems using aquatic species (microalgal and emergent aquatic plant species (MEAP) which effectively exploit the potentially available resources of the Southwest.

Temporal changes in the diazotrophic bacterial communities associated with Caribbean sponges Ircinia stroblina and Mycale laxissima.

Science.gov (United States)

Zhang, Fan; Vicente, Jan; Hill, Russell T

2014-01-01

Sponges that harbor microalgal or, cyanobacterial symbionts may benefit from photosynthetically derived carbohydrates, which are rich in carbon but devoid of nitrogen, and may therefore encounter nitrogen limitation. Diazotrophic communities associated with two Caribbean sponges, Ircinia strobilina and Mycale laxissima were studied in a time series during which three individuals of each sponge were collected in four time points (5:00 AM, 12:00 noon, 5:00 PM, 10:00 PM). nifH genes were successfully amplified from the corresponding gDNA and cDNA pools and sequenced by high throughput 454 amplicon sequencing. In both sponges, over half the nifH transcripts were classified as from cyanobacteria and the remainder from heterotrophic bacteria. We found various groups of bacteria actively expressing the nifH gene during the entire day-night cycle, an indication that the nitrogen fixation potential was fully exploited by different nitrogen fixing bacteria groups associated with their hosts. This study showed for the first time the dynamic changes in the activity of the diazotrophic bacterial communities in marine sponges. Our study expands understanding of the diazotrophic groups that contribute to the fixed nitrogen pool in the benthic community. Sponge bacterial community-associated diazotrophy may have an important impact on the nitrogen biogeochemical cycle in the coral reef ecosystem.

Temporal changes in the diazotrophic bacterial communities associated with Caribbean sponges Ircinia stroblina and Mycale laxissima

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Fan eZhang

2014-10-01

Full Text Available Sponges that harbor microalgal or cyanobacterial symbionts may benefit from photosynthetically derived carbohydrates, which are rich in carbon but devoid of nitrogen, and may therefore encounter nitrogen limitation. Diazotrophic communities associated with two Caribbean sponges, Ircinia strobilina and Mycale laxissima were studied in a time series during which three individuals of each sponge were collected in four time points (5:00 AM, 12:00 noon, 5:00 PM, 10:00 PM. nifH genes were successfully amplified from the corresponding gDNA and cDNA pools and sequenced by high throughput 454 amplicon sequencing. In both sponges, over half the nifH transcripts were classified as from cyanobacteria and the remainder from heterotrophic bacteria. We found various groups of bacteria actively expressing the nifH gene during the entire day-night cycle, an indication that the nitrogen fixation potential was fully exploited by different nitrogen fixing bacteria groups associated with their hosts. This study showed for the first time the dynamic changes in the activity of the diazotrophic bacterial communities in marine sponges. Our study expands understanding of the diazotrophic groups that contribute to the fixed nitrogen pool in the benthic community. Sponge bacterial community-associated diazotrophy may have an important impact on the nitrogen biogeochemical cycle in the coral reef ecosystem.

Challenges facing local communities in Tanzania in realising locally-managed marine areas

NARCIS (Netherlands)

Katikiro, R.E.; Macusi, E.D.; Ashoka Deepananda, K.H.M.

2015-01-01

This study explores how the history and process of establishing a marine protected area (MPA) under the control of the state has led to limited interest in community-based management amongst local stakeholders. The study contributes to the understanding of historical events that have discouraged

Marine bioinvasions: Differences in tropical copepod communities between inside and outside a port

Science.gov (United States)

Soares, Marcelo de Oliveira; Campos, Carolina Coelho; Santos, Nívia Maria Oliveira; Barroso, Hortência de Sousa; Mota, Erika Maria Targino; Menezes, Maria Ozilea Bezerra de; Rossi, Sergio; Garcia, Tatiane Martins

2018-04-01

The difficulty of detecting non-indigenous species (NIS) in marine environments is an "invisible problem" in areas where plankton monitoring does not occur. In this study, we investigated the dominance of the NIS Temora turbinata and copepod community structure in two tropical marine habitats: inside an offshore port, which had turbid and calm waters, and outside the port, which was more hydrodynamic. Our study area was on the northeast coast of Brazil. We found 17 taxa of Copepoda, which were dominated by T. turbinata and the congener, T. stylifera. The high average density of the NIS (21.03 ind./m3) was in stark contrast with that of the native copepods (0.01-3.27 ind./m3). The NIS density was negatively correlated with the species richness and evenness of the native community, was significantly higher inside the port than outside, and was positively correlated with phytoplankton density. A multivariate analysis revealed that there was a significant difference in copepod community structure between inside and outside the port; outside the port, the community was more diverse, and the native T. stylifera was more abundant. We found that tropical copepod communities inside an offshore port have low diversity, and probably have little biotic resistance against NIS invasions. Our results, combined with those previously obtained, highlight the need to study the spatial distributions of NIS and native species in pelagic environments.

Consolidated bioprocessing of microalgal biomass to carboxylates by a mixed culture of cow rumen bacteria using anaerobic sequencing batch reactor (ASBR).

Science.gov (United States)

Zhao, Baisuo; Liu, Jie; Frear, Craig; Holtzapple, Mark; Chen, Shulin

2016-12-01

This study employed mixed-culture consolidated bioprocessing (CBP) to digest microalgal biomass in an anaerobic sequencing batch reactor (ASBR). The primary objectives are to evaluate the impact of hydraulic residence time (HRT) on the productivity of carboxylic acids and to characterize the bacterial community. HRT affects the production rate and patterns of carboxylic acids. For the 5-L laboratory-scale fermentation, a 12-day HRT was selected because it offered the highest productivity of carboxylic acids and it synthesized longer chains. The variability of the bacterial community increased with longer HRT (R 2 =0.85). In the 5-L laboratory-scale fermentor, the most common phyla were Firmicutes (58.3%), Bacteroidetes (27.4%), and Proteobacteria (11.9%). The dominant bacterial classes were Clostridia (29.8%), Bacteroidia (27.4%), Tissierella (26.2%), and Betaproteobacteria (8.9%). Copyright © 2016 Elsevier Ltd. All rights reserved.

[Hyperbolic growth of marine and continental biodiversity through the phanerozoic and community evolution].

Science.gov (United States)

Markov, A V; Korotaev, A V

2008-01-01

Among diverse models that are used to describe and interpret the changes in global biodiversity through the Phanerozoic, the exponential and logistic models (traditionally used in population biology) are the most popular. As we have recently demonstrated (Markov, Korotayev, 2007), the growth of the Phanerozoic marine biodiversity at genus level correlates better with the hyperbolic model (widely used in demography and macrosociology). Here we show that the hyperbolic model is also applicable to the Phanerozoic continental biota at genus and family levels, and to the marine biota at species, genus, and family levels. There are many common features in the evolutionary dynamics of the marine and continental biotas that imply similarity and common nature of the factors and mechanisms underlying the hyperbolic growth. Both marine and continental biotas are characterized by continuous growth of the mean longevity of taxa, by decreasing extinction and origination rates, by similar pattern of replacement of dominant groups, by stepwise accumulation of evolutionary stable, adaptable and "physiologically buffered" taxa with effective mechanisms of parental care, protection of early developmental stages, etc. At the beginning of the development of continental biota, the observed taxonomic diversity was substantially lower than that predicted by the hyperbolic model. We suggest that this is due, firstly, to the fact that, during the earliest stages of the continental biota evolution, the groups that are not preserved in the fossil record (such as soil bacteria, unicellular algae, lichens, etc.) played a fundamental role, and secondly, to the fact that the continental biota initially formed as a marginal portion of the marine biota, rather than a separate system. The hyperbolic dynamics is most prominent when both marine and continental biotas are considered together. This fact can be interpreted as a proof of the integrated nature of the biosphere. In the macrosociological

Encapsulation of Multiple Microalgal Cells via a Combination of Biomimetic Mineralization and LbL Coating.

Science.gov (United States)

Kim, Minjeong; Choi, Myoung Gil; Ra, Ho Won; Park, Seung Bin; Kim, Yong-Joo; Lee, Kyubock

2018-02-13

The encapsulation of living cells is appealing for its various applications to cell-based sensors, bioreactors, biocatalysts, and bioenergy. In this work, we introduce the encapsulation of multiple microalgal cells in hollow polymer shells of rhombohedral shape by the following sequential processes: embedding of microalgae in CaCO₃ crystals; layer-by-layer (LbL) coating of polyelectrolytes; and removal of sacrificial crystals. The microcapsule size was controlled by the alteration of CaCO₃ crystal size, which is dependent on CaCl₂/Na₂CO₃ concentration. The microalgal cells could be embedded in CaCO₃ crystals by a two-step process: heterogeneous nucleation of crystal on the cell surface followed by cell embedment by the subsequent growth of crystal. The surfaces of the microalgal cells were highly favorable for the crystal growth of calcite; thus, micrometer-sized microalgae could be perfectly occluded in the calcite crystal without changing its rhombohedral shape. The surfaces of the microcapsules, moreover, could be decorated with gold nanoparticles, Fe₃O₄ magnetic nanoparticles, and carbon nanotubes (CNTs), by which we would expect the functionalities of a light-triggered release, magnetic separation, and enhanced mechanical and electrical strength, respectively. This approach, entailing the encapsulation of microalgae in semi-permeable and hollow polymer microcapsules, has the potential for application to microbial-cell immobilization for high-biomass-concentration cultivation as well as various other bioapplications.

Utilization of Microalgal Biofractions for Bioethanol, Higher Alcohols, and Biodiesel Production: A Review

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Marwa M. El-Dalatony

2017-12-01

Full Text Available Biomass is a crucial energy resource used for the generation of electricity and transportation fuels. Microalgae exhibit a high content of biocomponents which makes them a potential feedstock for the generation of ecofriendly biofuels. Biofuels derived from microalgae are suitable carbon-neutral replacements for petroleum. Fermentation is the major process for metabolic conversion of microalgal biocompounds into biofuels such as bioethanol and higher alcohols. In this review, we explored the use of all three major biocomponents of microalgal biomass including carbohydrates, proteins, and lipids for maximum biofuel generation. Application of several pretreatment methods for enhancement the bioavailability of substrates (simple sugar, amino acid, and fatty acid was discussed. This review goes one step further to discuss how to direct these biocomponents for the generation of various biofuels (bioethanol, higher alcohol, and biodiesel through fermentation and transesterification processes. Such an approach would result in the maximum utilization of biomasses for economically feasible biofuel production.

Towards microalgal triglycerides in the commodity markets.

Science.gov (United States)

Benvenuti, Giulia; Ruiz, Jesús; Lamers, Packo P; Bosma, Rouke; Wijffels, René H; Barbosa, Maria J

2017-01-01

Microalgal triglycerides (TAGs) hold great promise as sustainable feedstock for commodity industries. However, to determine research priorities and support business decisions, solid techno-economic studies are essential. Here, we present a techno-economic analysis of two-step TAG production (growth reactors are operated in continuous mode such that multiple batch-operated stress reactors are inoculated and harvested sequentially) for a 100-ha plant in southern Spain using vertically stacked tubular photobioreactors. The base case is established with outdoor pilot-scale data and based on current process technology. For the base case, production costs of 6.7 € per kg of biomass containing 24% TAG (w/w) were found. Several scenarios with reduced production costs were then presented based on the latest biological and technological advances. For instance, much effort should focus on increasing the photosynthetic efficiency during the stress and growth phases, as this is the most influential parameter on production costs (30 and 14% cost reduction from base case). Next, biological and technological solutions should be implemented for a reduction in cooling requirements (10 and 4.5% cost reduction from base case when active cooling is avoided and cooling setpoint is increased, respectively). When implementing all the suggested improvements, production costs can be decreased to 3.3 € per kg of biomass containing 60% TAG (w/w) within the next 8 years. With our techno-economic analysis, we indicated a roadmap for a substantial cost reduction. However, microalgal TAGs are not yet cost efficient when compared to their present market value. Cost-competiveness strictly relies on the valorization of the whole biomass components and on cheaper PBR designs (e.g. plastic film flat panels). In particular, further research should focus on the development and commercialization of PBRs where active cooling is avoided and stable operating temperatures are maintained by the water

Energy aspects of microalgal biodiesel production

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Edith Martinez-Guerra

2016-03-01

Full Text Available Algal biodiesel production will play a significant role in sustaining future transportation fuel supplies. A large number of researchers around the world are investigating into making this process sustainable by increasing the energy gains and by optimizing resource-utilization efficiencies. Although, research is being pursued aggressively in all aspects of algal biodiesel production from microalgal cell cultivation, cell harvesting, and extraction and transesterification steps to the final product separation and purification, there is a large disparity in the data presented in recent reports making it difficult to assess the real potential of microalgae as a future energy source. This article discusses some of the key issues in energy consumption in the process of algal biodiesel production and identifies the areas for improvement to make this process energy-positive and sustainable.

Identification of Carbohydrate Metabolism Genes in the Metagenome of a Marine Biofilm Community Shown to Be Dominated by Gammaproteobacteria and Bacteroidetes

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Jennifer L. Edwards

2010-10-01

Full Text Available Polysaccharides are an important source of organic carbon in the marine environment and degradation of the insoluble and globally abundant cellulose is a major component of the marine carbon cycle. Although a number of species of cultured bacteria are known to degrade crystalline cellulose, little is known of the polysaccharide hydrolases expressed by cellulose-degrading microbial communities, particularly in the marine environment. Next generation 454 Pyrosequencing was applied to analyze the microbial community that colonizes and degrades insoluble polysaccharides in situ in the Irish Sea. The bioinformatics tool MG-RAST was used to examine the randomly sampled data for taxonomic markers and functional genes, and showed that the community was dominated by members of the Gammaproteobacteria and Bacteroidetes. Furthermore, the identification of 211 gene sequences matched to a custom-made database comprising the members of nine glycoside hydrolase families revealed an extensive repertoire of functional genes predicted to be involved in cellulose utilization. This demonstrates that the use of an in situ cellulose baiting method yielded a marine microbial metagenome considerably enriched in functional genes involved in polysaccharide degradation. The research reported here is the first designed to specifically address the bacterial communities that colonize and degrade cellulose in the marine environment and to evaluate the glycoside hydrolase (cellulase and chitinase gene repertoire of that community, in the absence of the biases associated with PCR-based molecular techniques.

Microalgal cultivation for value-added products: a critical enviro-economical assessment.

Science.gov (United States)

Kothari, Richa; Pandey, Arya; Ahmad, Shamshad; Kumar, Ashwani; Pathak, Vinayak V; Tyagi, V V

2017-08-01

The present review focuses on the cultivation of algal biomass for generating value-added products (VAP) and to assess their economic benefits and harmful environmental impact. Additionally, the impact of bioreactor designs on the yield of microalgal biomass for VAP is also considered. All these factors are discussed in relation to the impact of microalgae production on the bio-economy sector of commercial biotechnology.

Large-scale biodiesel production using flue gas from coal-fired power plants with Nannochloropsis microalgal biomass in open raceway ponds.

Science.gov (United States)

Zhu, Baohua; Sun, Faqiang; Yang, Miao; Lu, Lin; Yang, Guanpin; Pan, Kehou

2014-12-01

The potential use of microalgal biomass as a biofuel source has raised broad interest. Highly effective and economically feasible biomass generating techniques are essential to realize such potential. Flue gas from coal-fired power plants may serve as an inexpensive carbon source for microalgal culture, and it may also facilitate improvement of the environment once the gas is fixed in biomass. In this study, three strains of the genus Nannochloropsis (4-38, KA2 and 75B1) survived this type of culture and bloomed using flue gas from coal-fired power plants in 8000-L open raceway ponds. Lower temperatures and solar irradiation reduced the biomass yield and lipid productivities of these strains. Strain 4-38 performed better than the other two as it contained higher amounts of triacylglycerols and fatty acids, which are used for biodiesel production. Further optimization of the application of flue gas to microalgal culture should be undertaken. Copyright © 2014 Elsevier Ltd. All rights reserved.

Effects of exotic fish farms on bird communities in lake and marine ecosystems

Science.gov (United States)

Jiménez, Jaime E.; Arriagada, Aldo M.; Fontúrbel, Francisco E.; Camus, Patricio A.; Ávila-Thieme, M. Isidora

2013-08-01

Salmon farming is a widespread activity around the world, also known to promote diverse environmental effects on aquatic ecosystems. However, information regarding the impact of salmon farming on bird assemblages is notably scarce. We hypothesize that salmon farming, by providing food subsidies and physical structures to birds, will change their local community structure. To test this hypothesis, we conducted a seasonal monitoring of bird richness, abundance, and composition at paired salmon pen and control plots in two marine and two lake sites in southern Chile, from fall 2002 to summer 2004. Overall, salmon farming had no significant effects on species richness, but bird abundance was significantly and noticeably higher in salmon pens than in controls. Such aggregation was mainly accounted for by the trophic guilds of omnivores, diving piscivores, carrion eaters, and perching piscivores, but not by invertebrate feeders, herbivores, and surface feeders. Species composition was also significantly and persistently different between salmon pens and controls within each lake or marine locality. The patterns described above remained consistent across environment types and seasons indicating that salmon farming is changing the community structure of birds in both lake and marine habitats by promoting functional and aggregation responses, particularly by favoring species with broader niches. Such local patterns may thus anticipate potential threats from the ongoing expansion of the salmon industry to neighboring areas in Chile, resulting in regional changes of bird communities, toward a less diverse one and dominated by opportunistic, common, and generalist species such as gulls, vultures, and cormorants.

Benthic microalgal production in the Arctic: Applied methods and status of the current database

DEFF Research Database (Denmark)

Glud, Ronnie Nøhr; Woelfel, Jana; Karsten, Ulf

2009-01-01

The current database on benthic microalgal production in Arctic waters comprises 10 peer-reviewed and three unpublished studies. Here, we compile and discuss these datasets, along with the applied measurement approaches used. The latter is essential for robust comparative analysis and to clarify ...

A novel microalgal system for energy production with nitrogen cycling

Energy Technology Data Exchange (ETDEWEB)

Minowa, T.; Sawayama, S. [National Institute for Resources and Environment, Tsukuba (Japan)

1999-08-01

A microalga, Chlorella vulgaris, could grow in the recovered solution from the low temperature catalytic gasification of itself, by which methane rich fuel gas was obtained. All nitrogen in the microalga was converted to ammonia during the gasification, and the recovered solution, in which ammonia was dissolved, could be used as nitrogen nutrient. The result of the energy evaluation indicated that the novel microalgal system for energy production with nitrogen cycling could be created. 9 refs., 3 tabs.

Hydrology Affects Environmental and Spatial Structuring of Microalgal Metacommunities in Tropical Pacific Coast Wetlands.

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Carmen Rojo

Full Text Available The alternating climate between wet and dry periods has important effects on the hydrology and therefore on niche-based processes of water bodies in tropical areas. Additionally, assemblages of microorganism can show spatial patterns, in the form of a distance decay relationship due to their size or life form. We aimed to test spatial and environmental effects, modulated by a seasonal flooding climatic pattern, on the distribution of microalgae in 30 wetlands of a tropical dry forest region: the Pacific coast of Costa Rica and Nicaragua. Three surveys were conducted corresponding to the beginning, the highest peak, and the end of the hydrological year during the wet season, and species abundance and composition of planktonic and benthic microalgae was determined. Variation partitioning analysis (as explained by spatial distance or environmental factors was applied to each seasonal dataset by means of partial redundancy analysis. Our results show that microalgal assemblages were structured by spatial and environmental factors depending on the hydrological period of the year. At the onset of hydroperiod and during flooding, neutral effects dominated community dynamics, but niche-based local effects resulted in more structured algal communities at the final periods of desiccating water bodies. Results suggest that climate-mediated effects on hydrology can influence the relative role of spatial and environmental factors on metacommunities of microalgae. Such variability needs to be accounted in order to describe accurately community dynamics in tropical coastal wetlands.

Hydrology Affects Environmental and Spatial Structuring of Microalgal Metacommunities in Tropical Pacific Coast Wetlands.

Science.gov (United States)

Rojo, Carmen; Mesquita-Joanes, Francesc; Monrós, Juan S; Armengol, Javier; Sasa, Mahmood; Bonilla, Fabián; Rueda, Ricardo; Benavent-Corai, José; Piculo, Rubén; Segura, M Matilde

2016-01-01

The alternating climate between wet and dry periods has important effects on the hydrology and therefore on niche-based processes of water bodies in tropical areas. Additionally, assemblages of microorganism can show spatial patterns, in the form of a distance decay relationship due to their size or life form. We aimed to test spatial and environmental effects, modulated by a seasonal flooding climatic pattern, on the distribution of microalgae in 30 wetlands of a tropical dry forest region: the Pacific coast of Costa Rica and Nicaragua. Three surveys were conducted corresponding to the beginning, the highest peak, and the end of the hydrological year during the wet season, and species abundance and composition of planktonic and benthic microalgae was determined. Variation partitioning analysis (as explained by spatial distance or environmental factors) was applied to each seasonal dataset by means of partial redundancy analysis. Our results show that microalgal assemblages were structured by spatial and environmental factors depending on the hydrological period of the year. At the onset of hydroperiod and during flooding, neutral effects dominated community dynamics, but niche-based local effects resulted in more structured algal communities at the final periods of desiccating water bodies. Results suggest that climate-mediated effects on hydrology can influence the relative role of spatial and environmental factors on metacommunities of microalgae. Such variability needs to be accounted in order to describe accurately community dynamics in tropical coastal wetlands.

Encapsulation of Multiple Microalgal Cells via a Combination of Biomimetic Mineralization and LbL Coating

Directory of Open Access Journals (Sweden)

Minjeong Kim

2018-02-01

Full Text Available The encapsulation of living cells is appealing for its various applications to cell-based sensors, bioreactors, biocatalysts, and bioenergy. In this work, we introduce the encapsulation of multiple microalgal cells in hollow polymer shells of rhombohedral shape by the following sequential processes: embedding of microalgae in CaCO3 crystals; layer-by-layer (LbL coating of polyelectrolytes; and removal of sacrificial crystals. The microcapsule size was controlled by the alteration of CaCO3 crystal size, which is dependent on CaCl2/Na2CO3 concentration. The microalgal cells could be embedded in CaCO3 crystals by a two-step process: heterogeneous nucleation of crystal on the cell surface followed by cell embedment by the subsequent growth of crystal. The surfaces of the microalgal cells were highly favorable for the crystal growth of calcite; thus, micrometer-sized microalgae could be perfectly occluded in the calcite crystal without changing its rhombohedral shape. The surfaces of the microcapsules, moreover, could be decorated with gold nanoparticles, Fe3O4 magnetic nanoparticles, and carbon nanotubes (CNTs, by which we would expect the functionalities of a light-triggered release, magnetic separation, and enhanced mechanical and electrical strength, respectively. This approach, entailing the encapsulation of microalgae in semi-permeable and hollow polymer microcapsules, has the potential for application to microbial-cell immobilization for high-biomass-concentration cultivation as well as various other bioapplications.

Adsorptive removal of cesium using bio fuel extraction microalgal waste

Energy Technology Data Exchange (ETDEWEB)

Inoue, Katsutoshi, E-mail: inoue@elechem.chem.saga-u.ac.jp [Department of Applied Chemistry, Faculty of Science and Engineering, Saga University, Honjo 1, Saga 840-8502 (Japan); Gurung, Manju [Department of Applied Chemistry, Faculty of Science and Engineering, Saga University, Honjo 1, Saga 840-8502 (Japan); Faculty of Engineering and Applied Science, Memorial University of Newfoundland, St. John' s, NL, Canada A1B 3X5 (Canada); Adhikari, Birendra Babu; Alam, Shafiq [Faculty of Engineering and Applied Science, Memorial University of Newfoundland, St. John' s, NL, Canada A1B 3X5 (Canada); Kawakita, Hidetaka; Ohto, Keisuke [Department of Applied Chemistry, Faculty of Science and Engineering, Saga University, Honjo 1, Saga 840-8502 (Japan); Kurata, Minoru [Research Laboratories, DENSO CORPORATION, Minamiyama 500-1, Komenoki, Nisshin, Aichi 470-0111 (Japan); Atsumi, Kinya [New Business Promotion Dept., DENSO CORPORATION, Showa-cho 1-1, Kariya, Aichi 448-8661 (Japan)

2014-04-01

Highlights: • A novel biosorbent was prepared from the microalgal waste after biofuel extraction. • Higher selectivity and adsorption efficiency of the adsorbent for Cs{sup +} over Na{sup +} ions from aqueous solutions. • Potential candidate and eco-friendly alternative to the commercial resins such as zeolite. - Abstract: An adsorption gel was prepared from microalgal waste after extracting biodiesel oil by a simple chemical treatment of crosslinking using concentrated sulfuric acid. The adsorbent exhibited notably high selectivity and adsorption capacity towards Cs{sup +} over Na{sup +} from aqueous solutions, within the pH range of slightly acidic to neutral. The adsorption followed Langmuir isotherm and the maximum adsorption capacity of the gel for Cs{sup +} calculated from Langmuir model was found to be 1.36 mol kg{sup −1}. Trace concentration of Cs{sup +} ions present in aqueous streams was successfully separated from Na{sup +} ions using a column packed with the adsorbent at pH 6.5. The adsorption capacity of the gel towards Cs{sup +} in column operation was 0.13 mol kg{sup −1}. Although the adsorbed Cs{sup +} ions were easily eluted using 1 M hydrochloric acid solution, simple incineration is proposed as an alternative for the treatment of adsorbent loaded with radioactive Cs{sup +} ions due to the combustible characteristics of this adsorbent.

[Trends of microalgal biotechnology: a view from bibliometrics].

Science.gov (United States)

Yang, Xiaoqiu; Wu, Yinsong; Yan, Jinding; Song, Haigang; Fan, Jianhua; Li, Yuanguang

2015-10-01

Microalgae is a single-cell organism with the characteristics of high light energy utilization rate, fast growth rate, high-value bioactive components and high energy material content. Therefore, microalgae has broad application prospects in food, feed, bioenergy, carbon sequestration, wastewater treatment and other fields. In this article, the microalgae biotechnology development in recent years were fully consulted, through analysis from the literature and patent. The progress of microalgal biotechnology at home and abroad is compared and discussed. Furthermore, the project layout, important achievements and development bottlenecks of microalgae biotechnology in our country were also summarized. At last, future development directions of microalgae biotechnology were discussed.

Community-level microalgal toxicity assessment by multiwavelength-excitation PAM fluorometry

International Nuclear Information System (INIS)

Schmitt-Jansen, Mechthild; Altenburger, Rolf

2008-01-01

In ecotoxicological studies involving community-level investigations, rapid and multiparametric fluorescence-based methods may provide substantial advantages over traditional methods used for structural and functional community analysis. Therefore, multiwavelength-excitation pulse-amplitude modulated (PAM) fluorometry was applied in this study to assess long-term changes in periphyton community structure, short-term effects on periphyton functioning (photosynthesis) and pollution induced community tolerance (PICT). For inter-calibration, periphyton structure was evaluated by chemotaxonomic analysis of accessory pigments and a four-wavelength-excitation PAM fluorometer. Short-term effects of herbicides were evaluated by fluorescence quenching analysis and 14 C-incorporation as a proxy of primary production. Subsequently, the method was applied to assess structural and functional changes in periphyton communities after isoproturon exposure for 14 and 26 days, respectively. Results showed good correlation of the PAM fluorescence-based measurements with traditional methods for biofilms in the initial colonisation phase for structural and functional parameters. However, for biofilms older than 9 weeks PAM fluorescence may underestimate biomass. Multiwavelength-excitation PAM fluorometry showed good correlation with marker pigment concentrations indicating that this method provides a reliable estimate of the community structure. PAM fluorometry was able to quantify changes of biomass and follow relative shifts in class composition of biofilms under exposure of isoproturon. Short-term tests based on the quantification of the inhibition of the effective quantum yield revealed a concentration-dependent increase of PICT. The observation of two succession phases of the biofilms after 14 and 26 days of growth, respectively, revealed that sensitivity of biofilms decreased with increasing age and biomass, respectively, but PICT remained a characteristic parameter of exposed

Community-level microalgal toxicity assessment by multiwavelength-excitation PAM fluorometry

Energy Technology Data Exchange (ETDEWEB)

Schmitt-Jansen, Mechthild [UFZ-Helmholtz Centre for Environmental Research, Department of Bioanalytical Ecotoxicology, Permoserstr. 15, 04318 Leipzig (Germany)], E-mail: Mechthild.Schmitt@ufz.de; Altenburger, Rolf [UFZ-Helmholtz Centre for Environmental Research, Department of Bioanalytical Ecotoxicology, Permoserstr. 15, 04318 Leipzig (Germany)

2008-01-20

In ecotoxicological studies involving community-level investigations, rapid and multiparametric fluorescence-based methods may provide substantial advantages over traditional methods used for structural and functional community analysis. Therefore, multiwavelength-excitation pulse-amplitude modulated (PAM) fluorometry was applied in this study to assess long-term changes in periphyton community structure, short-term effects on periphyton functioning (photosynthesis) and pollution induced community tolerance (PICT). For inter-calibration, periphyton structure was evaluated by chemotaxonomic analysis of accessory pigments and a four-wavelength-excitation PAM fluorometer. Short-term effects of herbicides were evaluated by fluorescence quenching analysis and {sup 14}C-incorporation as a proxy of primary production. Subsequently, the method was applied to assess structural and functional changes in periphyton communities after isoproturon exposure for 14 and 26 days, respectively. Results showed good correlation of the PAM fluorescence-based measurements with traditional methods for biofilms in the initial colonisation phase for structural and functional parameters. However, for biofilms older than 9 weeks PAM fluorescence may underestimate biomass. Multiwavelength-excitation PAM fluorometry showed good correlation with marker pigment concentrations indicating that this method provides a reliable estimate of the community structure. PAM fluorometry was able to quantify changes of biomass and follow relative shifts in class composition of biofilms under exposure of isoproturon. Short-term tests based on the quantification of the inhibition of the effective quantum yield revealed a concentration-dependent increase of PICT. The observation of two succession phases of the biofilms after 14 and 26 days of growth, respectively, revealed that sensitivity of biofilms decreased with increasing age and biomass, respectively, but PICT remained a characteristic parameter of exposed

Ecological succession reveals potential signatures of marine-terrestrial transition in salt marsh fungal communities

NARCIS (Netherlands)

Dini-Andreote, Francisco; Pylro, Victor Satler; Baldrian, Petr; van Elsas, Jan Dirk; Salles, Joana Falcão

Marine-to-terrestrial transition represents one of the most fundamental shifts in microbial life. Understanding the distribution and drivers of soil microbial communities across coastal ecosystems is critical given the roles of microbes in soil biogeochemistry and their multifaceted influence on

Microalgal-biochar immobilized complex: A novel efficient biosorbent for cadmium removal from aqueous solution.

Science.gov (United States)

Shen, Ying; Li, Huan; Zhu, Wenzhe; Ho, Shih-Hsin; Yuan, Wenqiao; Chen, Jianfeng; Xie, Youping

2017-11-01

The feasibility of the bioremediation of cadmium (Cd) using microalgal-biochar immobilized complex (MBIC) was investigated. Major operating parameters (e.g., pH, biosorbent dosage, initial Cd(II) concentration and microalgal-biochar ratio) were varied to compare the treatability of viable algae (Chlorella sp.), biochar and MBIC. The biosorption isotherms obtained by using algae or biochar were found to have satisfactory Langmuir predictions, while the best fitting adsorption isotherm model for MBIC was the Sips model. The maximum Cd(II) adsorption capacity of MBIC with a Chlorella sp.: biochar ratio of 2:3 (217.41mgg -1 ) was higher than that of Chlorella sp. (169.92mgg -1 ) or biochar (95.82mgg -1 ) alone. The pseudo-second-order model fitted the biosorption process of MBIC well (R 2 >0.999). Moreover, zeta potential, SEM and FTIR studies revealed that electrostatic attraction, ion exchange and surface complexation were the main mechanisms responsible for Cd removal when using MBIC. Copyright © 2017 Elsevier Ltd. All rights reserved.

Metagenomic Sequencing of Marine Periphyton: Taxonomic and Functional Insights into Biofilm Communities

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Kemal eSanli

2015-10-01

Full Text Available Periphyton communities are complex phototrophic, multispecies biofilms that develop on surfaces in aquatic environments. These communities harbor a large diversity of organisms comprising viruses, bacteria, algae, fungi, protozoans and metazoans. However, thus far the total biodiversity of periphyton has not been described. In this study, we use metagenomics to characterize periphyton communities from the marine environment of the Swedish west coast. Although we found approximately ten times more eukaryotic rRNA marker gene sequences compared to prokaryotic, the whole metagenome-based similarity searches showed that bacteria constitute the most abundant phyla in these biofilms. We show that marine periphyton encompass a range of heterotrophic and phototrophic organisms. Heterotrophic bacteria, including the majority of proteobacterial clades and Bacteroidetes, and eukaryotic macro-invertebrates were found to dominate periphyton. The phototrophic groups comprise Cyanobacteria and the alpha-proteobacterial genus Roseobacter, followed by different micro- and macro-algae. We also assess the metabolic pathways that predispose these communities to an attached lifestyle. Functional indicators of the biofilm form of life in periphyton involve genes coding for enzymes that catalyze the production and degradation of extracellular polymeric substances, mainly in the form of complex sugars such as starch and glycogen-like meshes together with chitin. Genes for 278 different transporter proteins were detected in the metagenome, constituting the most abundant protein complexes. Finally, genes encoding enzymes that participate in anaerobic pathways, such as denitrification and methanogenesis, were detected suggesting the presence of anaerobic or low-oxygen micro-zones within the biofilms.

Decoding size distribution patterns in marine and transitional water phytoplankton: from community to species level.

Directory of Open Access Journals (Sweden)

Leonilde Roselli

Full Text Available Understanding the mechanisms of phytoplankton community assembly is a fundamental issue of aquatic ecology. Here, we use field data from transitional (e.g. coastal lagoons and coastal water environments to decode patterns of phytoplankton size distribution into organization and adaptive mechanisms. Transitional waters are characterized by higher resource availability and shallower well-mixed water column than coastal marine environments. Differences in physico-chemical regime between the two environments have been hypothesized to exert contrasting selective pressures on phytoplankton cell morphology (size and shape. We tested the hypothesis focusing on resource availability (nutrients and light and mixed layer depth as ecological axes that define ecological niches of phytoplankton. We report fundamental differences in size distributions of marine and freshwater diatoms, with transitional water phytoplankton significantly smaller and with higher surface to volume ratio than marine species. Here, we hypothesize that mixing condition affecting size-dependent sinking may drive phytoplankton size and shape distributions. The interplay between shallow mixed layer depth and frequent and complete mixing of transitional waters may likely increase the competitive advantage of small phytoplankton limiting large cell fitness. The nutrient regime appears to explain the size distribution within both marine and transitional water environments, while it seem does not explain the pattern observed across the two environments. In addition, difference in light availability across the two environments appear do not explain the occurrence of asymmetric size distribution at each hierarchical level. We hypothesize that such competitive equilibria and adaptive strategies in resource exploitation may drive by organism's behavior which exploring patch resources in transitional and marine phytoplankton communities.

Ecology and biotechnological potential of bacterial community from three marine sponges of the coast of Rio de Janeiro, Brazil

Directory of Open Access Journals (Sweden)

FÁBIO V. DE ARAÚJO

2017-12-01

Full Text Available ABSTRACT Marine sponges has been a large reservoir of microbial diversity, with the presence of many species specific populations as well as producing biologically active compounds, which has attracted great biotechnological interest. In order to verify the influence of the environment in the composition of the bacterial community present in marine sponges and biotechnological potential of bacteria isolated from these organisms, three species of sponges and the waters surrounding them were collected in different beaches of Rio de Janeiro, Brazil. The profile of the bacterial community present in sponges and water was obtained by PCR-DGGE technique and the biotechnological potential of the strains isolated by producing amylase, cellulase, protease and biosurfactants. The results showed that despite the influence of the environment in the composition of the microbial community, studied marine sponges shown to have specific bacterial populations, with some, showing potential in the production of substances of biotechnological applications.

Islands in a Sea of Mud: Insights From Terrestrial Island Theory for Community Assembly on Insular Marine Substrata.

Science.gov (United States)

Meyer, K S

Most marine hard-bottom habitats are isolated, separated from other similar habitats by sand or mud flats, and can be considered analogous to terrestrial islands. The extensive scientific literature on terrestrial islands provides a theoretical framework for the analysis of isolated marine habitats. More individuals and higher species richness occur on larger marine substrata, a pattern that resembles terrestrial islands. However, while larger terrestrial islands have greater habitat diversity and productivity, the higher species richness on larger marine hard substrata can be explained by simple surface area and hydrodynamic phenomena: larger substrata extend further into the benthic boundary, exposing fauna to faster current and higher food supply. Marine island-like communities are also influenced by their distance to similar habitats, but investigations into the reproductive biology and dispersal ability of individual species are required for a more complete understanding of population connectivity. On terrestrial islands, nonrandom co-occurrence patterns have been attributed to interspecific competition, but while nonrandom co-occurrence patterns have been found for marine fauna, different mechanisms are responsible, including epibiontism. Major knowledge gaps for community assembly in isolated marine habitats include the degree of connectivity between isolated habitats, mechanisms of succession, and the extent of competition on hard substrata, particularly in the deep sea. Anthropogenic hard substrata of known age can be used opportunistically as "natural" laboratories to begin answering these questions. © 2017 Elsevier Ltd. All rights reserved.

Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community.

Science.gov (United States)

Zaghmouri, Imen; Michotey, Valerie D; Armougom, Fabrice; Guasco, Sophie; Bonin, Patricia C

2018-05-01

The sensitivity of denitrifying community to salinity fluctuations was studied in microcosms filled with marine coastal sediments subjected to different salinity disturbances over time (sediment under frequent salinity changes vs sediment with "stable" salinity pattern). Upon short-term salinity shift, denitrification rate and denitrifiers abundance showed high resistance whatever the sediment origin is. Denitrifying community adapted to frequent salinity changes showed high resistance when salinity increases, with a dynamic nosZ relative expression level. Marine sediment denitrifying community, characterized by more stable pattern, was less resistant when salinity decreases. However, after two successive variations of salinity, it shifted toward the characteristic community of fluctuating conditions, with larger proportion of Pseudomonas-nosZ, exhibiting an increase of nosZ relative expression level. The impact of long-term salinity variation upon bacterial community was confirmed at ribosomal level with a higher percentage of Pseudomonas and lower proportion of nosZII clade genera. Copyright © 2018 Elsevier Ltd. All rights reserved.

Follow-up trends of parasite community alteration in a marine fish after the Prestige oil-spill: shifting baselines?

Science.gov (United States)

Pérez-del-Olmo, A; Montero, F E; Raga, J A; Fernández, M; Kostadinova, A

2009-01-01

This study evaluates the follow-up trends in the composition and structure of the parasite communities in the marine sparid Boops boops after the Prestige oil-spill. A total of 400 fish comprising 11 seasonal samples was analyzed from three impacted localities on the Atlantic coast of Spain. A large number of parasite species was recovered only after the spill thus suggesting a substantial alteration of the marine food webs. Post-spill communities exhibited higher richness and abundance due to the significant changes in the abundance of the common species, the latter indicating accelerated parasite transmission rates. Multivariate analyses at two nested scales detected a directional trend in parasite community succession towards the pre-spill situation, however, with no full support for community recovery. The state of parasite communities in 2005-2006 may provide the new baseline data which can serve as a framework for quantifying the impact of potential future spills in the region.

Climate-driven changes in functional biogeography of Arctic marine fish communities.

Science.gov (United States)

Frainer, André; Primicerio, Raul; Kortsch, Susanne; Aune, Magnus; Dolgov, Andrey V; Fossheim, Maria; Aschan, Michaela M

2017-11-14

Climate change triggers poleward shifts in species distribution leading to changes in biogeography. In the marine environment, fish respond quickly to warming, causing community-wide reorganizations, which result in profound changes in ecosystem functioning. Functional biogeography provides a framework to address how ecosystem functioning may be affected by climate change over large spatial scales. However, there are few studies on functional biogeography in the marine environment, and none in the Arctic, where climate-driven changes are most rapid and extensive. We investigated the impact of climate warming on the functional biogeography of the Barents Sea, which is characterized by a sharp zoogeographic divide separating boreal from Arctic species. Our unique dataset covered 52 fish species, 15 functional traits, and 3,660 stations sampled during the recent warming period. We found that the functional traits characterizing Arctic fish communities, mainly composed of small-sized bottom-dwelling benthivores, are being rapidly replaced by traits of incoming boreal species, particularly the larger, longer lived, and more piscivorous species. The changes in functional traits detected in the Arctic can be predicted based on the characteristics of species expected to undergo quick poleward shifts in response to warming. These are the large, generalist, motile species, such as cod and haddock. We show how functional biogeography can provide important insights into the relationship between species composition, diversity, ecosystem functioning, and environmental drivers. This represents invaluable knowledge in a period when communities and ecosystems experience rapid climate-driven changes across biogeographical regions. Copyright © 2017 the Author(s). Published by PNAS.

High-throughput, label-free, single-cell, microalgal lipid screening by machine-learning-equipped optofluidic time-stretch quantitative phase microscopy.

Science.gov (United States)

Guo, Baoshan; Lei, Cheng; Kobayashi, Hirofumi; Ito, Takuro; Yalikun, Yaxiaer; Jiang, Yiyue; Tanaka, Yo; Ozeki, Yasuyuki; Goda, Keisuke

2017-05-01

The development of reliable, sustainable, and economical sources of alternative fuels to petroleum is required to tackle the global energy crisis. One such alternative is microalgal biofuel, which is expected to play a key role in reducing the detrimental effects of global warming as microalgae absorb atmospheric CO 2 via photosynthesis. Unfortunately, conventional analytical methods only provide population-averaged lipid amounts and fail to characterize a diverse population of microalgal cells with single-cell resolution in a non-invasive and interference-free manner. Here high-throughput label-free single-cell screening of lipid-producing microalgal cells with optofluidic time-stretch quantitative phase microscopy was demonstrated. In particular, Euglena gracilis, an attractive microalgal species that produces wax esters (suitable for biodiesel and aviation fuel after refinement), within lipid droplets was investigated. The optofluidic time-stretch quantitative phase microscope is based on an integration of a hydrodynamic-focusing microfluidic chip, an optical time-stretch quantitative phase microscope, and a digital image processor equipped with machine learning. As a result, it provides both the opacity and phase maps of every single cell at a high throughput of 10,000 cells/s, enabling accurate cell classification without the need for fluorescent staining. Specifically, the dataset was used to characterize heterogeneous populations of E. gracilis cells under two different culture conditions (nitrogen-sufficient and nitrogen-deficient) and achieve the cell classification with an error rate of only 2.15%. The method holds promise as an effective analytical tool for microalgae-based biofuel production. © 2017 International Society for Advancement of Cytometry. © 2017 International Society for Advancement of Cytometry.

Spatial and body-size dependent response of marine pelagic communities to projected global climate change.

Science.gov (United States)

Lefort, Stelly; Aumont, Olivier; Bopp, Laurent; Arsouze, Thomas; Gehlen, Marion; Maury, Olivier

2015-01-01

Temperature, oxygen, and food availability directly affect marine life. Climate models project a global warming of the ocean's surface (~+3 °C), a de-oxygenation of the ocean's interior (~-3%) and a decrease in total marine net primary production (~-8%) under the 'business as usual' climate change scenario (RCP8.5). We estimated the effects of these changes on biological communities using a coupled biogeochemical (PISCES)--ecosystems (APECOSM) model forced by the physical outputs of the last generation of the IPSL-CM Earth System Model. The APECOSM model is a size-structured bio-energetic model that simulates the 3D dynamical distributions of three interactive pelagic communities (epipelagic, mesopelagic, and migratory) under the effects of multiple environmental factors. The PISCES-APECOSM model ran from 1850 to 2100 under historical forcing followed by RCP8.5. Our RCP8.5 simulation highlights significant changes in the spatial distribution, biomass, and maximum body-size of the simulated pelagic communities. Biomass and maximum body-size increase at high latitude over the course of the century, reflecting the capacity of marine organisms to respond to new suitable environment. At low- and midlatitude, biomass and maximum body-size strongly decrease. In those regions, large organisms cannot maintain their high metabolic needs because of limited and declining food availability. This resource reduction enhances the competition and modifies the biomass distribution among and within the three communities: the proportion of small organisms increases in the three communities and the migrant community that initially comprised a higher proportion of small organisms is favored. The greater resilience of small body-size organisms resides in their capacity to fulfill their metabolic needs under reduced energy supply and is further favored by the release of predation pressure due to the decline of large organisms. These results suggest that small body-size organisms might be

Predicting the effects of climate change on marine communities and the consequences for fisheries

DEFF Research Database (Denmark)

Jennings, Simon; Brander, Keith

2010-01-01

for the community under the same climate scenario. The main weakness of the community approach is that the methods predict abundance and production by size-class rather than taxonomic group, and society would be particularly concerned if climate driven changes had a strong effect on the relative production...... of fishable and non-fishable species in the community. The main strength of the community approach is that it provides widely applicable ‘null’ models for assessing the biological effects of climate change and a baseline for model comparisons.......Climate effects on the structure and function of marine communities have received scant attention. The few existing approaches for predicting climate effects suggest that community responses might be predicted from the responses of component populations. These approaches require a very complex...

Ecological succession reveals potential signatures of marine-terrestrial transition in salt marsh fungal communities.

Science.gov (United States)

Dini-Andreote, Francisco; Pylro, Victor Satler; Baldrian, Petr; van Elsas, Jan Dirk; Salles, Joana Falcão

2016-08-01

Marine-to-terrestrial transition represents one of the most fundamental shifts in microbial life. Understanding the distribution and drivers of soil microbial communities across coastal ecosystems is critical given the roles of microbes in soil biogeochemistry and their multifaceted influence on landscape succession. Here, we studied the fungal community dynamics in a well-established salt marsh chronosequence that spans over a century of ecosystem development. We focussed on providing high-resolution assessments of community composition, diversity and ecophysiological shifts that yielded patterns of ecological succession through soil formation. Notably, despite containing 10- to 100-fold lower fungal internal transcribed spacer abundances, early-successional sites revealed fungal richnesses comparable to those of more mature soils. These newly formed sites also exhibited significant temporal variations in β-diversity that may be attributed to the highly dynamic nature of the system imposed by the tidal regime. The fungal community compositions and ecophysiological assignments changed substantially along the successional gradient, revealing a clear signature of ecological replacement and gradually transforming the environment from a marine into a terrestrial system. Moreover, distance-based linear modelling revealed soil physical structure and organic matter to be the best predictors of the shifts in fungal β-diversity along the chronosequence. Taken together, our study lays the basis for a better understanding of the spatiotemporally determined fungal community dynamics in salt marshes and highlights their ecophysiological traits and adaptation in an evolving ecosystem.

Follow-up trends of parasite community alteration in a marine fish after the Prestige oil-spill: Shifting baselines?

International Nuclear Information System (INIS)

Perez-del-Olmo, A.; Montero, F.E.; Raga, J.A.; Fernandez, M.; Kostadinova, A.

2009-01-01

This study evaluates the follow-up trends in the composition and structure of the parasite communities in the marine sparid Boops boops after the Prestige oil-spill. A total of 400 fish comprising 11 seasonal samples was analyzed from three impacted localities on the Atlantic coast of Spain. A large number of parasite species was recovered only after the spill thus suggesting a substantial alteration of the marine food webs. Post-spill communities exhibited higher richness and abundance due to the significant changes in the abundance of the common species, the latter indicating accelerated parasite transmission rates. Multivariate analyses at two nested scales detected a directional trend in parasite community succession towards the pre-spill situation, however, with no full support for community recovery. The state of parasite communities in 2005-2006 may provide the new baseline data which can serve as a framework for quantifying the impact of potential future spills in the region. - Prestige oil-spill impact on parasite communities in the sparid fish B. boops

Assessing the Effect of Pretreatments on the Structure and Functionality of Microbial Communities for the Bioconversion of Microalgae to Biogas

Directory of Open Access Journals (Sweden)

Olivia Córdova

2018-06-01

Full Text Available Microalgae biomethanization is driven by anaerobic sludge associated microorganisms and is generally limited by the incomplete hydrolysis of the microalgae cell wall, which results in a low availability of microalgal biomass for the methanogenic community. The application of enzymatic pretreatments, e.g., with hydrolytic enzymes, is among the strategies used to work around the incomplete hydrolysis of the microalgae cell wall. Despite the proven efficacy of these pretreatments in increasing biomethanization, the changes that a given pretreatment may cause to the anaerobic sludge associated microorganisms during biomethanization are still unknown. This study evaluated the changes in the expression of the metatranscriptome of anaerobic sludge associated microorganisms during Chlorella sorokiniana biomethanization without pretreatment (WP (control and pretreated with commercial cellulase in order to increase the solubilization of the microalgal organic matter. Pretreated microalgal biomass experienced significant increases in biogas the production. The metatranscriptomic analysis of control samples showed functionally active microalgae cells, a bacterial community dominated by γ- and δ-proteobacteria, and a methanogenic community dominated by Methanospirillum hungatei. In contrast, pretreated samples were characterized by the absence of active microalgae cells and a bacteria population dominated by species of the Clostridia class. These differences are also related to the differential activation of metabolic pathways e.g., those associated with the degradation of organic matter during its biomethanization.

Distribution of the dominant microbial communities in marine sediments containing high concentrations of gas hydrates

Energy Technology Data Exchange (ETDEWEB)

Briggs, B.; Colwell, F.; Carini, P.; Torres, M. [Oregon State Univ., Corvallis, OR (United States); Hangsterfer, A.; Kastner, M. [California Univ., San Diego, CA (United States). Scripps Inst. of Oceanography; Brodie, E. [Lawrence Berkeley National Laboratory, Berkeley, CA (United States). Center for Environmental Biotechnology; Daly, R. [California Univ., Berkeley, CA (United States); Holland, M. [GeoTek, Daventry, Northants (United Kingdom); Long, P.; Schaef, H. [Pacific Northwest National Laboratory, Richland, WA (United States). Environmental Technology; Delwiche, M. [Idaho National Laboratory, Idaho Falls, ID (United States). Biotechnology; Winters, W. [United States Geological Survey, Woods Hole, MA (United States). Woods Hole Science Center; Riedel, M. [McGill Univ., Montreal, PQ (Canada). Dept. of Earth and Planetary Sciences

2008-07-01

Methane produced by microorganisms represents a large portion of the methane that occurs in marine sediments where gas hydrates are present. The diverse communities that populate these formations have been documented by cultures or through molecular traces. Previous studies have explored the biogeography of hydrate-bearing systems by comparing clone libraries developed from sediments where hydrates are abundant with those developed from sediments that lack hydrates. There is a distinct microbial community present in sediments that have methane hydrates. This paper presented an investigation into finer-scale biogeography, in order to determine how factors such as the presence or absence of hydrates, grain size, and the depositional environment in marine sediments may control the number, type and distribution of microbial communities in sediments. The purpose of the study was to understand the controls on the distribution and activity of all microbes that contribute to the conversion of organic matter to methane. To this aim, DNA was extracted from deep marine sediments cored from continental slope locations including offshore India and the Cascadia Margin. The data from the study was used to refine computational models that require biological rate terms that are consistent with sediment conditions in order to accurately describe the dynamics of this large methane reservoir. The paper discussed the materials and methods used for the study, including the sample site, sample collection and microbiological analysis. Results were presented in terms of DNA extractions; microbial diversity; and biofilm analyses. It was concluded that the findings from the study complemented previously reported studies which indicated the presence of diverse microbial communities in sediments containing methane hydrates. 9 refs., 5 figs.

Biodiversity characterisation and hydrodynamic consequences of marine fouling communities on marine renewable energy infrastructure in the Orkney Islands Archipelago, Scotland, UK.

Science.gov (United States)

Want, Andrew; Crawford, Rebecca; Kakkonen, Jenni; Kiddie, Greg; Miller, Susan; Harris, Robert E; Porter, Joanne S

2017-08-01

As part of ongoing commitments to produce electricity from renewable energy sources in Scotland, Orkney waters have been targeted for potential large-scale deployment of wave and tidal energy converting devices. Orkney has a well-developed infrastructure supporting the marine energy industry; recently enhanced by the construction of additional piers. A major concern to marine industries is biofouling on submerged structures, including energy converters and measurement instrumentation. In this study, the marine energy infrastructure and instrumentation were surveyed to characterise the biofouling. Fouling communities varied between deployment habitats; key species were identified allowing recommendations for scheduling device maintenance and preventing spread of invasive organisms. A method to measure the impact of biofouling on hydrodynamic response is described and applied to data from a wave-monitoring buoy deployed at a test site in Orkney. The results are discussed in relation to the accuracy of the measurement resources for power generation. Further applications are suggested for future testing in other scenarios, including tidal energy.

Energy analysis and environmental impacts of microalgal biodiesel in China

International Nuclear Information System (INIS)

Liao Yanfen; Huang Zehao; Ma Xiaoqian

2012-01-01

The entire life cycle of biodiesel produced by microalgal biomasses was evaluated using the method of life cycle assessment (LCA) to identify and quantify the fossil energy requirements and environmental impact loading of the system. The life cycle considers microalgae cultivation, harvesting, drying, oil extraction, anaerobic digestion, oil transportation, esterification, biodiesel transportation and biodiesel combustion. The investigation results show that the fossil energy requirement for the biodiesel production is 0.74 MJ/MJ biodiesel, indicating that 1 MJ of biodiesel requires an input of 0.74 MJ of fossil energy. Accordingly, biodiesel production is feasible as an energy producing process. The environmental impact loading of microalgal biodiesel is 3.69 PET 2010 (Person Equivalents, Targeted, in 2010) and the GWP is 0.16 kg CO 2-eq /MJ biodiesel. The effects of photochemical ozone formation were greatest among all calculated categorization impacts. The fossil energy requirement and GWP in this operation were found to be particularly sensitive to oil content, drying rate and esterification rate. Overall, the results presented herein indicate that the cultivation of microalgae has the potential to produce an environmentally sustainable feedstock for the production of biodiesel. - Highlights: ► Do energy analysis and environmental impacts of algal biodiesel in China. ► GWP and energy consumption are sensitive to lipid content and drying rate. ► Fossil energy consumption for algal biodiesel is 0.74 MJ/MJ. ► Microalgae are an environmentally sustainable feedstock for biodiesel production.

Pole-to-pole biogeography of surface and deep marine bacterial communities

Science.gov (United States)

Ghiglione, Jean-François; Galand, Pierre E.; Pommier, Thomas; Pedrós-Alió, Carlos; Maas, Elizabeth W.; Bakker, Kevin; Bertilson, Stefan; Kirchman, David L.; Lovejoy, Connie; Yager, Patricia L.; Murray, Alison E.

2012-01-01

The Antarctic and Arctic regions offer a unique opportunity to test factors shaping biogeography of marine microbial communities because these regions are geographically far apart, yet share similar selection pressures. Here, we report a comprehensive comparison of bacterioplankton diversity between polar oceans, using standardized methods for pyrosequencing the V6 region of the small subunit ribosomal (SSU) rRNA gene. Bacterial communities from lower latitude oceans were included, providing a global perspective. A clear difference between Southern and Arctic Ocean surface communities was evident, with 78% of operational taxonomic units (OTUs) unique to the Southern Ocean and 70% unique to the Arctic Ocean. Although polar ocean bacterial communities were more similar to each other than to lower latitude pelagic communities, analyses of depths, seasons, and coastal vs. open waters, the Southern and Arctic Ocean bacterioplankton communities consistently clustered separately from each other. Coastal surface Southern and Arctic Ocean communities were more dissimilar from their respective open ocean communities. In contrast, deep ocean communities differed less between poles and lower latitude deep waters and displayed different diversity patterns compared with the surface. In addition, estimated diversity (Chao1) for surface and deep communities did not correlate significantly with latitude or temperature. Our results suggest differences in environmental conditions at the poles and different selection mechanisms controlling surface and deep ocean community structure and diversity. Surface bacterioplankton may be subjected to more short-term, variable conditions, whereas deep communities appear to be structured by longer water-mass residence time and connectivity through ocean circulation. PMID:23045668

Effects of organic pollution on biological communities of marine biofilm on hard substrata.

Science.gov (United States)

Sanz-Lázaro, C; Fodelianakis, S; Guerrero-Meseguer, L; Marín, A; Karakassis, I

2015-06-01

We examined the effect of organic enrichment on diatom and bacterial assemblages of marine epilithic biofilms on two locations in the Mediterranean, one situated in Spain and the other in Greece. Total organic carbon, total organic nitrogen, stable isotopes (δ(13)C and δ(15)N) and chlorophyll a indicated significant incorporation of organic wastes, increased primary production and trophic niche modifications on the biofilms close to the organic enrichment source. In Spain, where the organic load was higher than in Greece, diatom and, to some extent, bacterial assemblages varied following the organic enrichment gradient. The taxonomic richness of diatom and bacterial communities was not influenced by organic enrichment. Classical community parameters showed consistent patterns to organic pollution in both locations, whereas community assemblages were only influenced when organic pollution was greatest. The successional patterns of these communities were similar to other epilithic communities. The modification of community assemblages induced by organic pollution may affect ecological functions. Copyright © 2015 Elsevier Ltd. All rights reserved.

Phosphorus removal using a microalgal biofilm in a new biofilm photobioreactor for tertiary wastewater treatment

Czech Academy of Sciences Publication Activity Database

Sukačová, Kateřina; Trtílek, M.; Rataj, Tomáš

2015-01-01

Roč. 75, mar (2015), s. 55-63 ISSN 0043-1354 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:67179843 Keywords : microalgal biofilm * phosphorus removal * wastewater treatment Subject RIV: EH - Ecology, Behaviour Impact factor: 5.991, year: 2015

Microalgal composition and primary production in Arctic sea ice: a seasonal study from Kobbeijord (Kangerluarsunnguaq), West Greenland

DEFF Research Database (Denmark)

Mikkelsen, Ditte Marie; Rysgaard, Søren; Glud, Ronnie N.

2008-01-01

We investigated the microalgal community in sea ice and in the water column of Kobbefjord, west Greenland, through an entire sea ice season, Temporal variation in physical (photosynthetically active radiation [PAR), temperature, brine volume) and chemical (salinity, nutrient concentration......) properties confirmed that sea ice is a very dynamic habitat. Nevertheless, a viable sea ice algal comuunity was present throughout the year, with a species succession from flagellate dominance (dinoflagellates and cryptophytes) in December to February, followed by Chaetoceros simplex (a centric diatom...... (maxima of 1.8 and 2.6 mu g chl](-1) in March and May, respectively). Primary production mirrored biomass dynamic, which had 2 seasonal peaks of ca. 21 and 15 mg Cm-2 d(-1). Integrated primary production over 7 mo was 0.8 g Cm-2 in sea ice and 94.4 g C m(-2) in the water column, with the vast majority...

Microalgal composition and primary production in Arctic sea ice: a seasonal study from Kobbeijord (Kangerluarsunnguaq), West Greenland

DEFF Research Database (Denmark)

Mikkelsen, Ditte Marie; Rysgaard, Søren; Glud, Ronnie N.

2008-01-01

We investigated the microalgal community in sea ice and in the water column of Kobbefjord, west Greenland, through an entire sea ice season, Temporal variation in physical (photosynthetically active radiation [PAR), temperature, brine volume) and chemical (salinity, nutrient concentration...... (maxima of 1.8 and 2.6 mu g chl](-1) in March and May, respectively). Primary production mirrored biomass dynamic, which had 2 seasonal peaks of ca. 21 and 15 mg Cm-2 d(-1). Integrated primary production over 7 mo was 0.8 g Cm-2 in sea ice and 94.4 g C m(-2) in the water column, with the vast majority......) properties confirmed that sea ice is a very dynamic habitat. Nevertheless, a viable sea ice algal comuunity was present throughout the year, with a species succession from flagellate dominance (dinoflagellates and cryptophytes) in December to February, followed by Chaetoceros simplex (a centric diatom...

Enhanced the energy outcomes from microalgal biomass by the novel biopretreatment

International Nuclear Information System (INIS)

He, Shuai; Fan, Xiaolei; Luo, Shengjun; Katukuri, Naveen Reddy; Guo, Rongbo

2017-01-01

Highlights: • The micro-aerobic pretreatment was used to improve energy yield of Chlorella sp. • The Bacillus licheniformis was confirmed to damage the cell wall of microalgae. • Obtained energy from Chlorella sp. was improved by 12.3%. • Pretreatment time was decreased from 60 h to 24 h. • The VS degradation efficiency was increased from 75.7% to 82.1%. - Abstract: Microalgae have been considered as one of the most promising biomass for the generation of biofuels. The anaerobic digestion (AD) has been proved to be a promising technique to transfer the microalgal biomass into biofuels. Previous study demonstrated that anaerobic pretreatment of microalgae biomass by Bacillus licheniformis could improve methane production. In this study micro-aerobic bio-pretreatment of microalgal biomass by the facultative anaerobic bacteria Bacillus licheniformis was invested with different loads of oxygen supplied. The bio-hydrogen and biomethane productions were tested to calculate total energy outcomes. The transmission electron microscope (TEM) photographs suggested that the novel micro-aerobic bio-pretreatment (MBP) could effectively damage the firm cell wall of algal cells. The processing time of the novel method (24 h) was less than the previous anaerobic pretreatment (60 h). Results showed that the group with 5 mL oxygen/g VS fed had the highest total energy outcomes, which was 17.6% higher than that of the anaerobic pretreatment.

Isolation and Selection of Microalgal Strains from Natural Water Sources in Viet Nam with Potential for Edible Oil Production.

Science.gov (United States)

Thao, Tran Yen; Linh, Dinh Thi Nhat; Si, Vo Chi; Carter, Taylor W; Hill, Russell T

2017-06-23

Industrial vegetable oil production in Viet Nam depends on oil seeds and crude plant oils that are currently more than 90% imported. As the first step in investigating the feasibility of using microalgae to provide Viet Nam with a domestic source of oil for food and edible oil industries, fifty lipid-producing microalgae were isolated and characterized. The microalgae were isolated from water sources ranging from freshwater to brackish and marine waters from a wide geographic distribution in Viet Nam. Initial analyses showed that 20 of the 50 strains had good growth rates, produced high biomass and had high lipid content, ranging up to 50% of dry weight biomass. 18S rRNA gene sequence analyses of the 50 strains showed a great diversity in this assemblage of microalgae, comprising at least 38 species and representatives of 25 genera : Chlamydomonas , Poterioochromonas , Scenedesmus , Desmodesmus , Chlorella , Bracteacoccus , Monoraphidium , Selenastrum , Acutodesmus , Mychonastes , Ankistrodesmus , Kirchneriella , Raphidocelis , Dictyosphaerium , Coelastrella , Schizochlamydella , Oocystidium , Nannochloris , Auxenochlorella , Chlorosarcinopsis , Stichococcus , Picochlorum , Prasinoderma , Chlorococcum , and Marvania. Some of the species are closely related to well-known lipid producers such as Chlorella sorokiniana , but some other strains are not closely related to the strains found in public sequence databases and likely represent new species. Analysis of oil quality showed that fatty acid profiles of the microalgal strains were very diverse and strain-dependent. Fatty acids in the microalgal oils comprised saturated fatty acids (SFAs), poly-unsaturated fatty acids (PUFAs), and mono-unsaturated fatty acids (MUFAs). The main SFA was palmitic acid. MUFAs and PUFAs were dominated by oleic acid, and linoleic and linolenic acids, respectively. Some strains were especially rich in the essential fatty acid α-linolenic acid (ALA), which comprised more than 20% of the

An integrated microalgal growth model and its application to optimize the biomass production of Scenedesmus sp. LX1 in open pond under the nutrient level of domestic secondary effluent.

Science.gov (United States)

Wu, Yin-Hu; Li, Xin; Yu, Yin; Hu, Hong-Ying; Zhang, Tian-Yuan; Li, Feng-Min

2013-09-01

Microalgal growth is the key to the coupled system of wastewater treatment and microalgal biomass production. In this study, Monod model, Droop model and Steele model were incorporated to obtain an integrated growth model describing the combined effects of nitrogen, phosphorus and light intensity on the growth rate of Scenedesmus sp. LX1. The model parameters were obtained via fitting experimental data to these classical models. Furthermore, the biomass production of Scenedesmus sp. LX1 in open pond under nutrient level of secondary effluent was analyzed based on the integrated model, predicting a maximal microalgal biomass production rate about 20 g m(-2) d(-1). In order to optimize the biomass production of open pond the microalgal biomass concentration, light intensity on the surface of open pond, total depth of culture medium and hydraulic retention time should be 500 g m(-3), 16,000 lx, 0.2 m and 5.2 d in the conditions of this study, respectively. Copyright © 2013 Elsevier Ltd. All rights reserved.

Competition and facilitation between the marine nitrogen-fixing cyanobacterium Cyanothece and its associated bacterial community

NARCIS (Netherlands)

Brauer, Verena S; Stomp, Maayke; Bouvier, Thierry; Fouilland, Eric; Leboulanger, Christophe; Confurius-Guns, Veronique; Weissing, Franz J; Stal, Lucas J; Huisman, Jef

2015-01-01

N2-fixing cyanobacteria represent a major source of new nitrogen and carbon for marine microbial communities, but little is known about their ecological interactions with associated microbiota. In this study we investigated the interactions between the unicellular N2-fixing cyanobacterium Cyanothece

A Mosaic of Geothermal and Marine Features Shapes Microbial Community Structure on Deception Island Volcano, Antarctica

OpenAIRE

Amanda G. Bendia; Camila N. Signori; Diego C. Franco; Rubens T. D. Duarte; Brendan J. M. Bohannan; Vivian H. Pellizari

2018-01-01

Active volcanoes in Antarctica contrast with their predominantly cold surroundings, resulting in environmental conditions capable of selecting for versatile and extremely diverse microbial communities. This is especially true on Deception Island, where geothermal, marine, and polar environments combine to create an extraordinary range of environmental conditions. Our main goal in this study was to understand how microbial community structure is shaped by gradients of temperature, salinity, an...

Growth and metabolic characteristics of oleaginous microalgal isolates from Nilgiri biosphere Reserve of India.

Science.gov (United States)

Thangavel, Kalaiselvi; Radha Krishnan, Preethi; Nagaiah, Srimeena; Kuppusamy, Senthil; Chinnasamy, Senthil; Rajadorai, Jude Sudhagar; Nellaiappan Olaganathan, Gopal; Dananjeyan, Balachandar

2018-01-03

Renewable energy for sustainable development is a subject of a worldwide debate since continuous utilization of non-renewable energy sources has a drastic impact on the environment and economy; a search for alternative energy resources is indispensable. Microalgae are promising and potential alternate energy resources for biodiesel production. Thus, our efforts were focused on surveying the natural diversity of microalgae for the production of biodiesel. The present study aimed at identification, isolation, and characterization of oleaginous microalgae from shola forests of Nilgiri Biosphere Reserve (NBR), the biodiversity hot spot of India, where the microalgal diversity has not yet been systematically investigated. Overall the higher biomass yield, higher lipid accumulation and thermotolerance observed in the isolated microalgal strains have been found to be the desirable traits for the efficient biodiesel production. Species composition and diversity analysis yielded ten potential microalgal isolates belonging to Chlorophyceae and Cyanophyceae classes. The chlorophytes exhibited higher growth rate, maximum biomass yield, and higher lipid accumulation than Cyanophyceae. Among the chlorophytes, the best performing strains were identified and represented by Acutodesmus dissociatus (TGA1), Chlorella sp. (TGA2), Chlamydomonadales sp. (TGA3) and Hindakia tetrachotoma (PGA1). The Chlamydomonadales sp. recorded with the highest growth rate, lipid accumulation and biomass yield of 0.28 ± 0.03 day -1 (μ exp ), 29.7 ± 0.69% and 134.17 ± 16.87 mg L -1  day -1 , respectively. It was also found to grow well at various temperatures, viz., 25 °C, 35 °C, and 45 °C, indicating its suitability for open pond cultivation. The fatty acid methyl ester (FAME) analysis of stationary phase cultures of selected four algal strains by tandem mass spectrograph showed C16:0, C18:1 and C18:3 as dominant fatty acids suitable for biodiesel production. All the three

The lipid response of aerobic marine methanotroph communities under changing environmental conditions.

Science.gov (United States)

Rush, D.; Villanueva, L.; van der Meer, M.; S Sinninghe Damsté, J.

2017-12-01

Methane (CH4) originating from marine environments accounts for a significant amount of atmospheric greenhouse gas. Aerobic methanotrophs, which convert CH4 to CO­2, are responsible for quenching a part of this methane before its release. Modern-day climate projections show a rapid shift towards a warmer, more acidic ocean. How do these important methanotrophic communities respond to such changes to their environment? Here, we present the results of microcosm experiments from three marine regions influenced by CH4. Particulate organic matter and sediment were collected from the Black Sea, the Baltic Sea, and the North Sea, at depths ideal for aerobic methanotroph communities at the time of sampling (e.g. oxic, in area of active CH4 release). These were incubated under different temperatures, pHs, and labelled 13CH4 concentrations. We monitored methane concentration in these microcosms as an indication of 13CH4 consumption by methanotrophs. Once the methane concentration was lipids of the organisms oxidising methane in order to elucidate which organisms are performing methane oxidation and whether they synthesize specific biomarker lipids. Particular attention will be paid to the abundances and diversity of bacteriohopanepolyol lipids, known methanotroph biomarkers. The ultimate goal of our investigation is to determine the effect changes in these environmental parameters have on aerobic methanotroph community structures and their lipid fingerprints. By establishing reliable biomarker lipids for aerobic methanotrophy at certain conditions, we will then be able to investigate the contribution of aerobic methanotrophy throughout Earth's history, especially at times when CH4 concentrations were higher than they are at present.

Genetic diversity and temporal variation of the marine Synechococcus community in the subtropical coastal waters of Hong Kong.

Science.gov (United States)

Jing, Hongmei; Zhang, Rui; Pointing, Stephen B; Liu, Hongbin; Qian, Peiyuan

2009-03-01

The phylogenetic diversity of the marine Synechococcus community in the subtropical coastal waters of Hong Kong, China, was examined through intergenic transcribed spacer clone libraries. All the sequences obtained fell within both marine cluster A (MC-A) and B (MC-B), with MC-A phylotypes dominating throughout the year. Distinct phylogenetic lineages specific to Hong Kong waters were detected from both MC-A and MC-B. The highest Synechococcus community diversity occurred in December, but the highest Synechococcus abundance occurred in August. On the other hand, both the abundance and diversity of Synechococcus showed a minimum in February. The remarkable seasonal variations of Synechococcus diversity observed were likely the result of the changes of hydrographic condition modulated by monsoons. Principal component analysis revealed that the in situ abiotic water characteristics, especially salinity and water turbidity, explained much of the variability of the marine Synechococcus population diversity in Hong Kong coastal waters. In addition, the temporal changes of Synechococcus abundance were largely driven by water temperature.

Molecular Techniques Revealed Highly Diverse Microbial Communities in Natural Marine Biofilms on Polystyrene Dishes for Invertebrate Larval Settlement

KAUST Repository

Lee, On On

2014-01-09

Biofilm microbial communities play an important role in the larval settlement response of marine invertebrates. However, the underlying mechanism has yet to be resolved, mainly because of the uncertainties in characterizing members in the communities using traditional 16S rRNA gene-based molecular methods and in identifying the chemical signals involved. In this study, pyrosequencing was used to characterize the bacterial communities in intertidal and subtidal marine biofilms developed during two seasons. We revealed highly diverse biofilm bacterial communities that varied with season and tidal level. Over 3,000 operational taxonomic units with estimates of up to 8,000 species were recovered in a biofilm sample, which is by far the highest number recorded in subtropical marine biofilms. Nineteen phyla were found, of which Cyanobacteria and Proteobacteria were the most dominant one in the intertidal and subtidal biofilms, respectively. Apart from these, Actinobacteria, Bacteroidetes, and Planctomycetes were the major groups recovered in both intertidal and subtidal biofilms, although their relative abundance varied among samples. Full-length 16S rRNA gene clone libraries were constructed for the four biofilm samples and showed similar bacterial compositions at the phylum level to those revealed by pyrosequencing. Laboratory assays confirmed that cyrids of the barnacle Balanus amphitrite preferred to settle on the intertidal rather than subtidal biofilms. This preference was independent of the biofilm bacterial density or biomass but was probably related to the biofilm community structure, particularly, the Proteobacterial and Cyanobacterial groups. © 2014 Springer Science+Business Media New York.

A Mosaic of Geothermal and Marine Features Shapes Microbial Community Structure on Deception Island Volcano, Antarctica

Directory of Open Access Journals (Sweden)

Amanda G. Bendia

2018-05-01

Full Text Available Active volcanoes in Antarctica contrast with their predominantly cold surroundings, resulting in environmental conditions capable of selecting for versatile and extremely diverse microbial communities. This is especially true on Deception Island, where geothermal, marine, and polar environments combine to create an extraordinary range of environmental conditions. Our main goal in this study was to understand how microbial community structure is shaped by gradients of temperature, salinity, and geochemistry in polar marine volcanoes. Thereby, we collected surface sediment samples associated with fumaroles and glaciers at two sites on Deception, with temperatures ranging from 0 to 98°C. Sequencing of the 16S rRNA gene was performed to assess the composition and diversity of Bacteria and Archaea. Our results revealed that Deception harbors a combination of taxonomic groups commonly found both in cold and geothermal environments of continental Antarctica, and also groups normally identified at deep and shallow-sea hydrothermal vents, such as hyperthermophilic archaea. We observed a clear separation in microbial community structure across environmental gradients, suggesting that microbial community structure is strongly niche driven on Deception. Bacterial community structure was significantly associated with temperature, pH, salinity, and chemical composition; in contrast, archaeal community structure was strongly associated only with temperature. Our work suggests that Deception represents a peculiar “open-air” laboratory to elucidate central questions regarding molecular adaptability, microbial evolution, and biogeography of extremophiles in polar regions.

Ecology of selected marine communities in Glacier Bay: Zooplankton, forage fish, seabirds and marine mammals

Science.gov (United States)

Robards, Martin D.; Drew, Gary S.; Piatt, John F.; Anson, Jennifer Marie; Abookire, Alisa A.; Bodkin, James L.; Hooge, Philip N.; Speckman, Suzann G.

2003-01-01

We studied oceanography (including primary production), secondary production, small schooling fish (SSF), and marine bird and mammal predators in Glacier Bay during 1999 and 2000. Results from these field efforts were combined with a review of current literature relating to the Glacier Bay environment. Since the conceptual model developed by Hale and Wright (1979) ‘changes and cycles’ continue to be the underlying theme of the Glacier Bay ecosystem. We found marked seasonality in many of the parameters that we investigated over the two years of research, and here we provide a comprehensive description of the distribution and relative abundance of a wide array of marine biota. Glacier Bay is a tidally mixed estuary that leads into basins, which stratify in summer, with the upper arms behaving as traditional estuaries. The Bay is characterized by renewal and mixing events throughout the year, and markedly higher primary production than in many neighboring southeast Alaska fjords (Hooge and Hooge, 2002). Zooplankton diversity and abundance within the upper 50 meters of the water column in Glacier Bay is similar to communities seen throughout the Gulf of Alaska. Zooplankton in the lower regions of Glacier Bay peak in abundance in late May or early June, as observed at Auke Bay and in the Gulf of Alaska. The key distinction between the lower Bay and other estuaries in the Gulf of Alaska is that a second smaller peak in densities occurs in August. The upper Bay behaved uniformly in temporal trends, peaking in July. Densities had begun to decline in August, but were still more than twice those observed in that region in May. The highest density of zooplankton observed was 17,870 organisms/m3 in Tarr Inlet during July. Trends in zooplankton community abundance and diversity within the lower Bay were distinct from upper-Glacier Bay trends. Whereas the lower Bay is strongly influenced by Gulf of Alaska processes, local processes are the strongest influence in the upper

Direct measurement and characterization of active photosynthesis zones inside biofuel producing and wastewater remediating microalgal biofilms

Energy Technology Data Exchange (ETDEWEB)

Bernstein, Hans C.; Kesaano, Maureen; Moll, Karen; Smith, Terence; Gerlach, Robin; Carlson, Ross; Miller, Charles D.; Peyton, Brent; Cooksey, Keith; Gardner, Robert D.; Sims, Ronald C.

2014-03-01

Abstract: Microalgal biofilm based technologies are of keen interest due to their high biomass concentrations and ability to utilize renewable resources, such as light and CO2. While photoautotrophic biofilms have long been used for wastewater remediation applications, biofuel production represents a relatively new and under-represented focus area. However, the direct measurement and characterization of fundamental parameters required for physiological analyses are challenging due to biofilm heterogeneity. This study evaluated oxygenic photosynthesis and biofuel precursor molecule production using a novel rotating algal biofilm reactor (RABR) operated at field- and laboratory-scales for wastewater remediation and biofuel production, respectively. Clear differences in oxygenic-photosynthesis, respiration and biofuel-precursor capacities were observed between the two systems and different conditions based on light and nitrogen availability. Nitrogen depletion was not found to have the same effect on lipid accumulation compared to prior planktonic studies. Physiological characterizations of these microalgal biofilms identify potential areas for future process optimization.

Effect of solvents and oil content on direct transesterification of wet oil-bearing microalgal biomass of Chlorella vulgaris ESP-31 for biodiesel synthesis using immobilized lipase as the biocatalyst.

Science.gov (United States)

Tran, Dang-Thuan; Chen, Ching-Lung; Chang, Jo-Shu

2013-05-01

In this work, a one-step extraction/transesterification process was developed to directly convert wet oil-bearing microalgal biomass of Chlorella vulgaris ESP-31 into biodiesel using immobilized Burkholderia lipase as the catalyst. The microalgal biomass (water content of 86-91%; oil content 14-63%) was pre-treated by sonication to disrupt the cell walls and then directly mixed with methanol and solvent to carry out the enzymatic transesterification. Addition of a sufficient amount of solvent (hexane is most preferable) is required for the direct transesterification of wet microalgal biomass, as a hexane-to-methanol mass ratio of 1.65 was found optimal for the biodiesel conversion. The amount of methanol and hexane required for the direct transesterification process was also found to correlate with the lipid content of the microalga. The biodiesel synthesis process was more efficient and economic when the lipid content of the microalgal biomass was higher. Therefore, using high-lipid-content microalgae as feedstock appears to be desirable. Copyright © 2012 Elsevier Ltd. All rights reserved.

Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

Science.gov (United States)

Graw, Michael F.; D'Angelo, Grace; Borchers, Matthew; Thurber, Andrew R.; Johnson, Joel E.; Zhang, Chuanlun; Liu, Haodong; Colwell, Frederick S.

2018-01-01

The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS) experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP) at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics. PMID:29696012

 Marine derived dinoflagellates in Antarctic saline lakes: Community composition and annual dynamics

DEFF Research Database (Denmark)

Rengefors, K.; Layborn-Parry, L.; Logares, R.

2008-01-01

polar dinoflagellate community, and not freshwater species. Polarella glacialis Montresor, Procaccini et Stoecker, a bipolar marine species, was for the first time described in a lake habitat and was an important phototrophic component in the higher salinity lakes. In the brackish lakes, we found a new...... sibling species to the brackish-water species Scrippsiella hangoei (J. Schiller) J. Larsen, previously observed only in the Baltic Sea....

COMPLEXITY OF ECOLOGICAL SYSTEMS (THE CASE OF MARINE CILIATE COMMUNITY

Directory of Open Access Journals (Sweden)

I.V. Burkovsky

2016-03-01

Full Text Available The paper analyzes the seasonal and long-term dynamics of marine interstitial ciliates communities as a result of the processes of system self-organization (of increasing complexity in constantly fluctuating environment. The traits of simple structure of ciliate community include substantial variability in the composition (even in case of stable environment and the lack of sustainable combinations of species. The mechanism of the current state maintenance is the lack of energy supply in certain periods or in specific loci of space, as well as large amplitude and unpredictable fluctuations of environmental factors. An indication of the community’s complexity is availability of stable combinations of species in time and space. The mechanisms of formation of stable species combinations are a constant flow of external energy, optimal values and stability of environmental factors (including repeatability of seasonal cycles and the use of space resources by species according the principle of complementarity of ecological niches.

Salt Effect on the Antioxidant Activity of Red Microalgal Sulfated Polysaccharides in Soy-Bean Formula

Directory of Open Access Journals (Sweden)

Ariela Burg

2015-10-01

Full Text Available Sulfated polysaccharides produced by microalgae, which are known to exhibit various biological activities, may potentially serve as natural antioxidant sources. To date, only a few studies have examined the antioxidant bioactivity of red microalgal polysaccharides. In this research, the effect of different salts on the antioxidant activities of two red microalgal sulfated polysaccharides derived from Porphyridium sp. and Porphyridium aerugineum were studied in a soy bean-based infant milk formula. Salt composition and concentration were both shown to affect the polysaccharides’ antioxidant activity. It can be postulated that the salt ions intefer with the polysaccharide chains’ interactions and alter their structure, leading to a new three-dimensional structure that better exposes antiooxidant sites in comparison to the polysaccharide without salt supplement. Among the cations that were studied, Ca2+ had the strongest enhancement effect on antioxidant activities of both polysaccharides. Understanding the effect of salts on polysaccharides’ stucture, in addition to furthering knowledge on polysaccharide bioactivities, may also shed light on the position of the antioxidant active sites.

Salt Effect on the Antioxidant Activity of Red Microalgal Sulfated Polysaccharides in Soy-Bean Formula.

Science.gov (United States)

Burg, Ariela; Oshrat, Levy-Ontman

2015-10-20

Sulfated polysaccharides produced by microalgae, which are known to exhibit various biological activities, may potentially serve as natural antioxidant sources. To date, only a few studies have examined the antioxidant bioactivity of red microalgal polysaccharides. In this research, the effect of different salts on the antioxidant activities of two red microalgal sulfated polysaccharides derived from Porphyridium sp. and Porphyridium aerugineum were studied in a soy bean-based infant milk formula. Salt composition and concentration were both shown to affect the polysaccharides' antioxidant activity. It can be postulated that the salt ions intefer with the polysaccharide chains' interactions and alter their structure, leading to a new three-dimensional structure that better exposes antiooxidant sites in comparison to the polysaccharide without salt supplement. Among the cations that were studied, Ca(2+) had the strongest enhancement effect on antioxidant activities of both polysaccharides. Understanding the effect of salts on polysaccharides' stucture, in addition to furthering knowledge on polysaccharide bioactivities, may also shed light on the position of the antioxidant active sites.

Broad-Scale Comparison of Photosynthesis in Terrestrial and Aquatic Plant Communities

DEFF Research Database (Denmark)

Sand-Jensen, Kaj; Krause-Jensen, D.

1997-01-01

Comparisons of photosynthesis in terrestrial and aquatic habitats have been impaired by differences in methods and time-scales of measurements. We compiled information on gross photosynthesis at high irradiance and photosynthetic efficiency at low irradiance from 109 published terrestrial studies...... communities probably due to more efficient light utilization and gas exchange in the terrestrial habitats. By contrast only small differences were found within different aquatic plant communities or within different terrestrial plant communities....... of forests, grasslands and crops and 319 aquatic studies of phytoplankton, macrophyte and attached microalgal communities to test if specific differences existed between the communities. Maximum gross photosynthesis and photosynthetic efficiency were systematically higher in terrestrial than in aquatic...

Characterization of the bacterial metagenome in an industrial algae bioenergy production system

Energy Technology Data Exchange (ETDEWEB)

Huang, Shi [Chinese Academy of Sciences; Fulbright, Scott P [Colorado State University; Zeng, Xiaowei [Chinese Academy of Sciences; Yates, Tracy [Solix Biofuels; Wardle, Greg [Solix Biofuels; Chisholm, Stephen T [Colorado State University; Xu, Jian [Chinese Academy of Sciences; Lammers, Peter [New Mexico State University

2011-03-16

Cultivation of oleaginous microalgae for fuel generally requires growth of the intended species to the maximum extent supported by available light. The presence of undesired competitors, pathogens and grazers in cultivation systems will create competition for nitrate, phosphate, sulfate, iron and other micronutrients in the growth medium and potentially decrease microalgal triglyceride production by limiting microalgal health or cell density. Pathogenic bacteria may also directly impact the metabolism or survival of individual microalgal cells. Conversely, symbiotic bacteria that enhance microalgal growth may also be present in the system. Finally, the use of agricultural and municipal wastes as nutrient inputs for microalgal production systems may lead to the introduction and proliferation of human pathogens or interfere with the growth of bacteria with beneficial effects on system performance. These considerations underscore the need to understand bacterial community dynamics in microalgal production systems in order to assess microbiome effects on microalgal productivity and pathogen risks. Here we focus on the bacterial component of microalgal production systems and describe a pipeline for metagenomic characterization of bacterial diversity in industrial cultures of an oleaginous alga, Nannochloropsis salina. Environmental DNA was isolated from 12 marine algal cultures grown at Solix Biofuels, a region of the 16S rRNA gene was amplified by PCR, and 16S amplicons were sequenced using a 454 automated pyrosequencer. The approximately 70,000 sequences that passed quality control clustered into 53,950 unique sequences. The majority of sequences belonged to thirteen phyla. At the genus level, sequences from all samples represented 169 different genera. About 52.94% of all sequences could not be identified at the genus level and were classified at the next highest possible resolution level. Of all sequences, 79.92% corresponded to 169 genera and 70 other taxa. We

Microalgal technology for remediation of CO{sub 2} from power plant flue gas: A technoeconomic perspective

Energy Technology Data Exchange (ETDEWEB)

Kadam, K.L.; Sheehan, J.J. [National Renewable Energy Lab., Golden, CO (United States). Biotechnology Center for Fuels and Chemicals

1996-12-01

Power plants burning fossil fuels are a major source of CO{sub 2}, which is implicated in global warming. Microalgal systems, which photosynthetically assimilate CO{sub 2}, can be used to mitigate this major greenhouse gas. A technoeconomic model was developed for trapping CO{sub 2} from flue gases by microalgae in outdoor ponds. The model allows the authors to make some notable observations about the microalgal process. For example, although it was known that the delivered CO{sub 2} cost is an important parameter, this model demonstrates in quantitative terms that the targeted improvements for productivity and lipid content double the relative impact of CO{sub 2} resource cost on total annualized cost of the technology. The model also shows that both algal lipid content and growth rate are important for an economical process, but a trade-off exists between the two, i.e., a high lipid content and low growth rate combination can be as effective as a low lipid content and high growth rate combination. Model predictions were also used to compare the microalgal technology with alternative technologies in terms of CO{sub 2} mitigation costs. The mid-term process, which can be implemented in the near future, is competitive with other CO{sub 2} remediation technologies currently being proposed. Incorporating anticipated advances into the design basis, a CO{sub 2} mitigation cost of $30/t (CO{sub 2} avoided basis) is obtained for the long-term process, which is very promising. Deployment of this technology for CO{sub 2} mitigation looks attractive if research goals put forth by the model are achieved.

Detailing the start-up and microalgal growth performance of a full-scale photobioreactor operated with bioindustrial wastewater

DEFF Research Database (Denmark)

Podevin, Michael Paul Ambrose; Fotidis, Ioannis; De Francisci, Davide

2017-01-01

were tested. Bioindustrial WW medium was treated with ultrafiltration and was demonstrated to be a viable microalgal growth medium at large scale; however, further treatment is needed for the removal of fecal coliform to meet drinking water standards. The fresh water mesophilic algae Chlorella...

Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

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Michael F. Graw

2018-04-01

Full Text Available The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics.

Assessing the effect of marine reserves on household food security in Kenyan coral reef fishing communities.

Directory of Open Access Journals (Sweden)

Emily S Darling

Full Text Available Measuring the success or failure of natural resource management is a key challenge to evaluate the impact of conservation for ecological, economic and social outcomes. Marine reserves are a popular tool for managing coastal ecosystems and resources yet surprisingly few studies have quantified the social-economic impacts of marine reserves on food security despite the critical importance of this outcome for fisheries management in developing countries. Here, I conducted semi-structured household surveys with 113 women heads-of-households to investigate the influence of two old, well-enforced, no-take marine reserves on food security in four coastal fishing communities in Kenya, East Africa. Multi-model information-theoretic inference and matching methods found that marine reserves did not influence household food security, as measured by protein consumption, diet diversity and food coping strategies. Instead, food security was strongly influenced by fishing livelihoods and household wealth: fishing families and wealthier households were more food secure than non-fishing and poorer households. These findings highlight the importance of complex social and economic landscapes of livelihoods, urbanization, power and gender dynamics that can drive the outcomes of marine conservation and management.

Shared Physiological and Molecular Responses in Marine Fish and Invertebrates to Environmental Hypoxia: Potential Biomarkers of Adverse Impacts on Marine Communities

Science.gov (United States)

Thomas, P.; Rahman, S.

2016-02-01

Knowledge of the effects of environmental exposure to hypoxia (dissolved oxygen: reproduction, growth and metabolism in both fish and invertebrates is essential for accurate predictions of its chronic impacts on marine communities. Marked disruption of reproduction and its endocrine control was observed in Atlantic croaker collected from the hypoxic region in the northern Gulf of Mexico. Recent research has shown that growth and its physiological upregulation is also impaired in hypoxia-exposed marine fish. Expression of insulin-like growth factor (IGF) binding protein (IGFBP), which inhibits growth, was increased in croaker livers, whereas plasma levels of IGF, the primary regulator of growth, were decreased in snapper after hypoxia exposure. In addition, hypoxia inducible factor-1 (HIF-1), which regulates changes in metabolism during adaptation to hypoxia, was upregulated in croaker collected from hypoxic environments. Interestingly, similar changes in the expression of IGFBP and HIF-1 have been found in marine crustaceans after hypoxia exposure, suggesting these responses to hypoxia are common to marine fish and invertebrates. Preliminary field studies indicate that hypoxia exposure also causes epigenetic modifications, including increases in global DNA methylation, and that these epigenetic changes can influence reproduction and growth in croaker. Epigenetic modifications can be passed to offspring and persist in future generations no longer exposed to an environmental stressor further aggravating its long-term adverse impacts on population abundance and delaying recovery. The growing availability of complete invertebrate genomes and high-throughput DNA sequencing indicates similar epigenetic studies can now be conducted with marine invertebrates. Collectively, the results indicate that environmental hypoxia exposure disrupts major physiological functions in fish and invertebrates critical for maintenance of their populations.

Molecular Techniques Revealed Highly Diverse Microbial Communities in Natural Marine Biofilms on Polystyrene Dishes for Invertebrate Larval Settlement

KAUST Repository

Lee, On On; Chung, Hong Chun; Yang, Jiangke; Wang, Yong; Dash, Swagatika; Wang, Hao; Qian, Pei-Yuan

2014-01-01

Biofilm microbial communities play an important role in the larval settlement response of marine invertebrates. However, the underlying mechanism has yet to be resolved, mainly because of the uncertainties in characterizing members

Extraction of microalgal lipids and the influence of polar lipids on biodiesel production by lipase-catalyzed transesterification.

Science.gov (United States)

Navarro López, Elvira; Robles Medina, Alfonso; González Moreno, Pedro Antonio; Esteban Cerdán, Luis; Molina Grima, Emilio

2016-09-01

In order to obtain microalgal saponifiable lipids (SLs) fractions containing different polar lipid (glycolipids and phospholipids) contents, SLs were extracted from wet Nannochloropsis gaditana microalgal biomass using seven extraction systems, and the polar lipid contents of some fractions were reduced by low temperature acetone crystallization. We observed that the polar lipid content in the extracted lipids depended on the polarity of the first solvent used in the extraction system. Lipid fractions with polar lipid contents between 75.1% and 15.3% were obtained. Some of these fractions were transformed into fatty acid methyl esters (FAMEs, biodiesel) by methanolysis, catalyzed by the lipases Novozym 435 and Rhizopus oryzae in tert-butanol medium. We observed that the reaction velocity was higher the lower the polar lipid content, and that the final FAME conversions achieved after using the same lipase batch to catalyze consecutive reactions decreased in relation to an increase in the polar lipid content. Copyright © 2016 Elsevier Ltd. All rights reserved.

Three-Dimensional Simulation of Ultrasound-Induced Microalgal Cell Disruption.

Science.gov (United States)

Wang, M; Yuan, W; Hale, Andy

2016-03-01

The three-dimensional distribution (x, y, and z) of ultrasound-induced microalgal cell disruption in a sonochemical reactor was predicted by solving the Helmholtz equation using a three-dimensional acoustic module in the COMSOL Multiphysics software. The simulated local ultrasound pressure at any given location (x, y, and z) was found to correlate with cell disruption of a freshwater alga, Scenedesmus dimorphus, represented by the change of algal cell particle/debris concentration, chlorophyll-a fluorescence density (CAFD), and Nile red stained lipid fluorescence density (LFD), which was also validated by the model reaction of potassium iodide oxidation (the Weissler reaction). Furthermore, the effect of ultrasound power intensity and processing duration on algal cell disruption was examined to address the limitation of the model.

Biofouling community composition across a range of environmental conditions and geographical locations suitable for floating marine renewable energy generation.

Science.gov (United States)

Macleod, Adrian K; Stanley, Michele S; Day, John G; Cook, Elizabeth J

2016-01-01

Knowledge of biofouling typical of marine structures is essential for engineers to define appropriate loading criteria in addition to informing other stakeholders about the ecological implications of creating novel artificial environments. There is a lack of information regarding biofouling community composition (including weight and density characteristics) on floating structures associated with future marine renewable energy generation technologies. A network of navigation buoys were identified across a range of geographical areas, environmental conditions (tidal flow speed, temperature and salinity), and deployment durations suitable for future developments. Despite the perceived importance of environmental and temporal factors, geographical location explained the greatest proportion of the observed variation in community composition, emphasising the importance of considering geography when assessing the impact of biofouling on device functioning and associated ecology. The principal taxa associated with variation in biofouling community composition were mussels (Mytilus edulis), which were also important when determining loading criteria.

Diversity and community structure of marine microbes around the Benham Rise underwater plateau, northeastern Philippines.

Science.gov (United States)

Gajigan, Andrian P; Yñiguez, Aletta T; Villanoy, Cesar L; San Diego-McGlone, Maria Lourdes; Jacinto, Gil S; Conaco, Cecilia

2018-01-01

Microbes are central to the structuring and functioning of marine ecosystems. Given the remarkable diversity of the ocean microbiome, uncovering marine microbial taxa remains a fundamental challenge in microbial ecology. However, there has been little effort, thus far, to describe the diversity of marine microorganisms in the region of high marine biodiversity around the Philippines. Here, we present data on the taxonomic diversity of bacteria and archaea in Benham Rise, Philippines, Western Pacific Ocean, using 16S V4 rRNA gene sequencing. The major bacterial and archaeal phyla identified in the Benham Rise are Proteobacteria, Cyanobacteria, Actinobacteria, Bacteroidetes, Marinimicrobia, Thaumarchaeota and, Euryarchaeota. The upper mesopelagic layer exhibited greater microbial diversity and richness compared to surface waters. Vertical zonation of the microbial community is evident and may be attributed to physical stratification of the water column acting as a dispersal barrier. Canonical Correspondence Analysis (CCA) recapitulated previously known associations of taxa and physicochemical parameters in the environment, such as the association of oligotrophic clades with low nutrient surface water and deep water clades that have the capacity to oxidize ammonia or nitrite at the upper mesopelagic layer. These findings provide foundational information on the diversity of marine microbes in Philippine waters. Further studies are warranted to gain a more comprehensive picture of microbial diversity within the region.

Marine snow microbial communities: scaling of abundances with aggregate size

DEFF Research Database (Denmark)

Kiørboe, Thomas

2003-01-01

Marine aggregates are inhabited by diverse microbial communities, and the concentration of attached microbes typically exceeds concentrations in the ambient water by orders of magnitude. An extension of the classical Lotka-Volterra model, which includes 3 trophic levels (bacteria, flagellates...... are controlled by flagellate grazing, while flagellate and ciliate populations are governed by colonization and detachment. The model also suggests that microbial populations are turned over rapidly (1 to 20 times d-1) due to continued colonization and detachment. The model overpredicts somewhat the scaling...... of microbial abundances with aggregate size observed in field-collected aggregates. This may be because it disregards the aggregation/disaggregation dynamics of aggregates, as well as interspecific interactions between bacteria....

Microalgal process-monitoring based on high-selectivity spectroscopy tools: status and future perspectives.

Science.gov (United States)

Podevin, Michael; Fotidis, Ioannis A; Angelidaki, Irini

2018-08-01

Microalgae are well known for their ability to accumulate lipids intracellularly, which can be used for biofuels and mitigate CO 2 emissions. However, due to economic challenges, microalgae bioprocesses have maneuvered towards the simultaneous production of food, feed, fuel, and various high-value chemicals in a biorefinery concept. On-line and in-line monitoring of macromolecules such as lipids, proteins, carbohydrates, and high-value pigments will be more critical to maintain product quality and consistency for downstream processing in a biorefinery to maintain and valorize these markets. The main contribution of this review is to present current and prospective advances of on-line and in-line process analytical technology (PAT), with high-selectivity - the capability of monitoring several analytes simultaneously - in the interest of improving product quality, productivity, and process automation of a microalgal biorefinery. The high-selectivity PAT under consideration are mid-infrared (MIR), near-infrared (NIR), and Raman vibrational spectroscopies. The current review contains a critical assessment of these technologies in the context of recent advances in software and hardware in order to move microalgae production towards process automation through multivariate process control (MVPC) and software sensors trained on "big data". The paper will also include a comprehensive overview of off-line implementations of vibrational spectroscopy in microalgal research as it pertains to spectral interpretation and process automation to aid and motivate development.

Marine Microalgae with Anti-Cancer Properties.

Science.gov (United States)

Martínez Andrade, Kevin A; Lauritano, Chiara; Romano, Giovanna; Ianora, Adrianna

2018-05-15

Cancer is the leading cause of death globally and finding new therapeutic agents for cancer treatment remains a major challenge in the pursuit for a cure. This paper presents an overview on microalgae with anti-cancer activities. Microalgae are eukaryotic unicellular plants that contribute up to 40% of global primary productivity. They are excellent sources of pigments, lipids, carotenoids, omega-3 fatty acids, polysaccharides, vitamins and other fine chemicals, and there is an increasing demand for their use as nutraceuticals and food supplements. Some microalgae are also reported as having anti-cancer activity. In this review, we report the microalgal species that have shown anti-cancer properties, the cancer cell lines affected by algae and the concentrations of compounds/extracts tested to induce arrest of cell growth. We also report the mediums used for growing microalgae that showed anti-cancer activity and compare the bioactivity of these microalgae with marine anticancer drugs already on the market and in phase III clinical trials. Finally, we discuss why some microalgae can be promising sources of anti-cancer compounds for future development.

B-Vitamin Competition: Intracellular and Dissolved B-Vitamins Provide Insight into Marine Microbial Community Dynamics

Science.gov (United States)

Suffridge, C.; Gomez-Consarnau, L.; Qu, P.; Tenenbaum, N.; Fu, F.; Hutchins, D. A.; Sanudo-Wilhelmy, S. A.

2016-02-01

The availability of B-vitamins has the ability to directly affect the dynamics of the marine microbial community. Here we show, for the first time, the connection between dissolved and intracellular B-vitamins in a marine environmental community. Two incubation experiments were conducted at a long-term study site (SPOT) in the San Pedro Basin off the coast of Los Angeles, CA. Experiments were conducted in oligotrophic, preupwelling conditions. Due to the 2015 El Niño event, the seasonal upwelling at SPOT did not occur, creating unusually nutrient depleted conditions. Vitamins B1, B7, and B12 were added in addition to macronutrients at concentrations similar to typical SPOT upwelling conditions. Intracellular and dissolved B-vitamin analyses were conducted to determine shifts in cellular B-vitamin requirements as a function of growth rate. We observed a significant bacterioplankton and phytoplankton growth responses with the addition of B-vitamins in a manner that appears to match the enzymatic requirements for these compounds (e.g. B1>B7>B12). Intracellular B-vitamin analysis of T0 samples support this observation, as all four forms of B12 were not detectable within cells, yet multiple forms of B1 and B7 were detected at or near levels previously reported. Treatments with B12 and macronutrients were observed to have the greatest growth rates. This finding, in addition to the apparent lack of intracellular B12 in the initial community, appears to indicate that the initial microbial community was limited by B12. The addition of each vitamin caused a distinct shift in the blooming microbial community. Our results demonstrate that B-vitamins strongly influence not only the growth rate, but also the species composition and species succession of the microbial community as a whole. Large-scale changes to upwelling regimes are predicted in the future ocean; our results indicate that B-vitamins will have a substantial role in controlling microbial community dynamics under

Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities.

Science.gov (United States)

Gilbert, Jack A; Field, Dawn; Huang, Ying; Edwards, Rob; Li, Weizhong; Gilna, Paul; Joint, Ian

2008-08-22

Sequencing the expressed genetic information of an ecosystem (metatranscriptome) can provide information about the response of organisms to varying environmental conditions. Until recently, metatranscriptomics has been limited to microarray technology and random cloning methodologies. The application of high-throughput sequencing technology is now enabling access to both known and previously unknown transcripts in natural communities. We present a study of a complex marine metatranscriptome obtained from random whole-community mRNA using the GS-FLX Pyrosequencing technology. Eight samples, four DNA and four mRNA, were processed from two time points in a controlled coastal ocean mesocosm study (Bergen, Norway) involving an induced phytoplankton bloom producing a total of 323,161,989 base pairs. Our study confirms the finding of the first published metatranscriptomic studies of marine and soil environments that metatranscriptomics targets highly expressed sequences which are frequently novel. Our alternative methodology increases the range of experimental options available for conducting such studies and is characterized by an exceptional enrichment of mRNA (99.92%) versus ribosomal RNA. Analysis of corresponding metagenomes confirms much higher levels of assembly in the metatranscriptomic samples and a far higher yield of large gene families with >100 members, approximately 91% of which were novel. This study provides further evidence that metatranscriptomic studies of natural microbial communities are not only feasible, but when paired with metagenomic data sets, offer an unprecedented opportunity to explore both structure and function of microbial communities--if we can overcome the challenges of elucidating the functions of so many never-seen-before gene families.

Fluoranthene induced changes in photosynthetic pigments, biochemical compounds and enzymatic activities in two microalgal species: Chlorella vulgaris Beijerinck and Desmodesmus subspicatus Chodat

Directory of Open Access Journals (Sweden)

Miral Patel

2014-02-01

Full Text Available The photosynthetic pigments, biochemical and enzymatic activities in two freshwater microalgal species, Chlorella vulgaris and Desmodesmus subspicatus at different fluoranthene concentrations were compared with the control conditions. During 16-days of incubation period when treated with fluoranthene, both microalgal species exhibited variable amount of photosynthetic pigment, biochemical compounds and enzymatic activities. The addition of fluoranthene at concentrations ranged from 1.5 mg l-1; to 10 mg l-1; to microalgal cultures led to changes in all different metabolites but the patterns varied from species to species. Among the two species tested, pigment, biochemical and enzymatic contents were remarkably declined from 7 % to 95% in C. vulgaris. Moreover, all metabolites in D. subspicatus also diminishing significantly by 3% to 88% of fluoranthene doses (10ppm. These results suggest that fluoranthene-induced changes of pigments, biochemical and enzymatic variations in test microalgae, D. subspicatus and C. vulgaris, might reveal its resistance and ability to metabolize PAHs. At the same time, the PAH impact changes on different metabolic activities were higher at 12 and 16 days than at 4 and 8 days in treated microalgae. DOI: http://dx.doi.org/10.3126/ije.v3i1.9941 International Journal of Environment Vol.3(1 2014: 41-55

Establishment and Implementation of the Balingasay Marine Protected Area: A Community-Based Approach

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Severino Salmo III

2000-12-01

Full Text Available A community-based approach in the establishment and implementation of a marine protected area (MPA in Balingasay, Bolinao, Pangasinan is presented. The factors necessary to facilitate the successful establishment and implementation of a community-managed MPA include heightening of environmental awareness, community mobilization, and legal/institutional and financial assistance. A heightened environmental awareness encouraged the community to undertake resource management action. The formation of a people’s organization, SAMMABAL (Samahan ng mga Mangingisda at Mamamayan ng Balingasay, was crucial in assessing environmental problems (e.g., overfishing and identifying the establishment of an MPA as a management tool to address the problem. SAMMABAL was also instrumental in eliciting community support for the issuance of a municipal ordinance in the establishment of the MPA. Subsequently, the organization initiated the patrolling of the MPA. Institutions involved in the community-based management of the MPA also included the multi-sectoral council (BRMC – Balingasay Resource Management Council and representatives from the barangay council and the municipal government. This institutional arrangement has proven to be very resilient, indicating a high probability of sustaining its successes despite some obstacles and shortcomings. Clear delineation of the role and functions of the institutions and the stakeholders was essential in advancing the initiative. This case study will draw on the lessons from the experience of a four-year community-managed MPA.

Biogeochemical interactions control a temporal succession in the elemental composition of marine communities

KAUST Repository

Martiny, Adam C.; Talarmin, Agathe Anne Gaelle; Mouginot, Cé line; Lee, Jeanette A.; Huang, Jeremy S.; Gellene, Alyssa G.; Caron, David A.

2015-01-01

Recent studies have revealed clear regional differences in the particulate organic matter composition and stoichiometry of plankton communities. In contrast, less is known about potential mechanisms and patterns of temporal changes in the elemental composition of marine systems. Here, we monitored weekly changes in environmental conditions, phytoplankton abundances, and particulate organic carbon, nitrogen, and phosphorus concentrations over a 3-yr period. We found that variation in the particulate organic matter (POM) concentrations and ratios were related to seasonal oscillations of environmental conditions and phytoplankton abundances. Periods with low temperature, high nutrient concentrations and a dominance of large phytoplankton corresponded to low C : N : P and vice-versa for warmer periods during the summer and fall. In addition to seasonal changes, we observed a multiyear increase in POM C : P and N : P that might be associated with the Pacific Decadal Oscillation. Finally, there was substantial short-term variability in all factors but similar linkages between environmental variability and elemental composition as observed on seasonal and interannual time-scales. Using a feed-forward neural network, we could explain a large part of the variation in POM concentrations and ratios based on changes in environmental conditions and phytoplankton abundances. The apparent links across all time-scales between changes in physics, chemistry, phytoplankton, and POM concentrations and ratios suggest we have identified key controls of the elemental composition of marine communities in this region.

Biogeochemical interactions control a temporal succession in the elemental composition of marine communities

KAUST Repository

Martiny, Adam C.

2015-11-23

Recent studies have revealed clear regional differences in the particulate organic matter composition and stoichiometry of plankton communities. In contrast, less is known about potential mechanisms and patterns of temporal changes in the elemental composition of marine systems. Here, we monitored weekly changes in environmental conditions, phytoplankton abundances, and particulate organic carbon, nitrogen, and phosphorus concentrations over a 3-yr period. We found that variation in the particulate organic matter (POM) concentrations and ratios were related to seasonal oscillations of environmental conditions and phytoplankton abundances. Periods with low temperature, high nutrient concentrations and a dominance of large phytoplankton corresponded to low C : N : P and vice-versa for warmer periods during the summer and fall. In addition to seasonal changes, we observed a multiyear increase in POM C : P and N : P that might be associated with the Pacific Decadal Oscillation. Finally, there was substantial short-term variability in all factors but similar linkages between environmental variability and elemental composition as observed on seasonal and interannual time-scales. Using a feed-forward neural network, we could explain a large part of the variation in POM concentrations and ratios based on changes in environmental conditions and phytoplankton abundances. The apparent links across all time-scales between changes in physics, chemistry, phytoplankton, and POM concentrations and ratios suggest we have identified key controls of the elemental composition of marine communities in this region.

Simultaneous improvement in production of microalgal biodiesel and high-value alpha-linolenic acid by a single regulator acetylcholine.

Science.gov (United States)

Parsaeimehr, Ali; Sun, Zhilan; Dou, Xiao; Chen, Yi-Feng

2015-01-01

Photoautotrophic microalgae are a promising avenue for sustained biodiesel production, but are compromised by low yields of biomass and lipids at present. We are developing a chemical approach to improve microalgal accumulation of feedstock lipids as well as high-value alpha-linolenic acid which in turn might provide a driving force for biodiesel production. We demonstrate the effectiveness of the small bioactive molecule "acetylcholine" on accumulation of biomass, total lipids, and alpha-linolenic acid in Chlorella sorokiniana. The effectiveness exists in different species of Chlorella. Moreover, the precursor and analogs of acetylcholine display increased effectiveness at higher applied doses, with maximal increases by 126, 80, and 60% over controls for biomass, total lipids, and alpha-linolenic acid, respectively. Production of calculated biodiesel was also improved by the precursor and analogs of acetylcholine. The biodiesel quality affected by changes in microalgal fatty acid composition was addressed. The chemical approach described here could improve the lipid yield and biodiesel production of photoautotrophic microalgae if combined with current genetic approaches.

Microalgal Photosynthesis and Spectral Scalar Irradiance in Coastal Marine-Sediments of Limfjorden, Denmark

DEFF Research Database (Denmark)

LASSEN, C.; PLOUG, H.; JØRGENSEN, BB

1992-01-01

(bacteriochlorophyll a). Infrared scalar irradiance reached 200% of incident light intensity at 0.0-0.3-mm depth and IR penetration was independent of the development of a cyanobacterial surface film. At high incident light intensity, 740 muEinst m-2 s-1, the photosynthetic efficiency at 1.0-mm depth was 10-fold...... higher than in the uppermost 0.0-0.6 mm of the sediment. The lower boundary of the euphotic zone (detectable gross photosynthesis) was at a mean light level of greater-than-or-equal-to 7.5 muEinst m-2 s-1.......Scalar irradiance and oxygenic photosynthesis were measured simultaneously at 100-mum spatial resolution by a fiber-optic scalar irradiance microsensor and an oxygen microelectrode spaced 120 mum apart. Marine microbial mats on sandy sediments along the coast of Limfjorden, Denmark, were dominated...

Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan.

Science.gov (United States)

Soliman, Taha; Reimer, James D; Yang, Sung-Yin; Villar-Briones, Alejandro; Roy, Michael C; Jenke-Kodama, Holger

2017-01-01

Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan "Kaichu-Doro" Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima) to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores ( n = 10) from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA) of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs) revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae) were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments.

Effects of marine reserves versus nursery habitat availability on structure of reef fish communities.

Science.gov (United States)

Nagelkerken, Ivan; Grol, Monique G G; Mumby, Peter J

2012-01-01

No-take marine fishery reserves sustain commercial stocks by acting as buffers against overexploitation and enhancing fishery catches in adjacent areas through spillover. Likewise, nursery habitats such as mangroves enhance populations of some species in adjacent habitats. However, there is lack of understanding of the magnitude of stock enhancement and the effects on community structure when both protection from fishing and access to nurseries concurrently act as drivers of fish population dynamics. In this study we test the separate as well as interactive effects of marine reserves and nursery habitat proximity on structure and abundance of coral reef fish communities. Reserves had no effect on fish community composition, while proximity to nursery habitat only had a significant effect on community structure of species that use mangroves or seagrass beds as nurseries. In terms of reef fish biomass, proximity to nursery habitat by far outweighed (biomass 249% higher than that in areas with no nursery access) the effects of protection from fishing in reserves (biomass 21% lower than non-reserve areas) for small nursery fish (≤ 25 cm total length). For large-bodied individuals of nursery species (>25 cm total length), an additive effect was present for these two factors, although fish benefited more from fishing protection (203% higher biomass) than from proximity to nurseries (139% higher). The magnitude of elevated biomass for small fish on coral reefs due to proximity to nurseries was such that nursery habitats seem able to overrule the usually positive effects on fish biomass by reef reserves. As a result, conservation of nursery habitats gains importance and more consideration should be given to the ecological processes that occur along nursery-reef boundaries that connect neighboring ecosystems.

Effects of marine reserves versus nursery habitat availability on structure of reef fish communities.

Directory of Open Access Journals (Sweden)

Ivan Nagelkerken

Full Text Available No-take marine fishery reserves sustain commercial stocks by acting as buffers against overexploitation and enhancing fishery catches in adjacent areas through spillover. Likewise, nursery habitats such as mangroves enhance populations of some species in adjacent habitats. However, there is lack of understanding of the magnitude of stock enhancement and the effects on community structure when both protection from fishing and access to nurseries concurrently act as drivers of fish population dynamics. In this study we test the separate as well as interactive effects of marine reserves and nursery habitat proximity on structure and abundance of coral reef fish communities. Reserves had no effect on fish community composition, while proximity to nursery habitat only had a significant effect on community structure of species that use mangroves or seagrass beds as nurseries. In terms of reef fish biomass, proximity to nursery habitat by far outweighed (biomass 249% higher than that in areas with no nursery access the effects of protection from fishing in reserves (biomass 21% lower than non-reserve areas for small nursery fish (≤ 25 cm total length. For large-bodied individuals of nursery species (>25 cm total length, an additive effect was present for these two factors, although fish benefited more from fishing protection (203% higher biomass than from proximity to nurseries (139% higher. The magnitude of elevated biomass for small fish on coral reefs due to proximity to nurseries was such that nursery habitats seem able to overrule the usually positive effects on fish biomass by reef reserves. As a result, conservation of nursery habitats gains importance and more consideration should be given to the ecological processes that occur along nursery-reef boundaries that connect neighboring ecosystems.

Socioeconomic Factors Influencing Customary Marine Tenure in the Indo-Pacific

Directory of Open Access Journals (Sweden)

Joshua Cinner

2005-06-01

Full Text Available For generations communities in the Western Pacific have employed a range of resource management techniques (including periodic reef closures, gear restrictions, entry limitations, and the protection of spawning aggregations to limit marine resource use. Localized control over marine resources, commonly known as customary marine tenure (CMT, is the legal and cultural foundation for many of these practices. Because of their perceived potential to meet both conservation and community goals, these traditional resource management techniques are being revitalized by communities, governments, and NGOs as an integral part of national and regional marine conservation plans in the Pacific. However, the viability of conservation strategies built on a foundation of marine tenure may be in question, as it remains unclear whether marine tenure systems will be able to withstand the profound social and economic changes sweeping the Pacific region. Numerous studies have suggested that changes in marine tenure are attributed to social and economic factors, however, specific relationships between socioeconomic conditions and marine tenure are still not well understood. This paper examines the social and economic characteristics of 21 coastal communities in Papua New Guinea and Indonesia, and explores the characteristics of the communities that employ exclusive marine tenure to answer the following questions: Which socioeconomic factors are related to the presence of CMT regimes? How might socioeconomic factors influence the ability of communities to employ or maintain CMT regimes? Distance to market, immigration, dependence on fishing, and conflicts were found to be related to the presence of highly exclusive marine tenure systems. Exploring these relationships will help conservation practitioners better understand how future social changes may influence the foundation of conservation and development projects.

Marine Microbial Gene Abundance and Community Composition in Response to Ocean Acidification and Elevated Temperature in Two Contrasting Coastal Marine Sediments

Directory of Open Access Journals (Sweden)

Ashleigh R. Currie

2017-08-01

Full Text Available Marine ecosystems are exposed to a range of human-induced climate stressors, in particular changing carbonate chemistry and elevated sea surface temperatures as a consequence of climate change. More research effort is needed to reduce uncertainties about the effects of global-scale warming and acidification for benthic microbial communities, which drive sedimentary biogeochemical cycles. In this research, mesocosm experiments were set up using muddy and sandy coastal sediments to investigate the independent and interactive effects of elevated carbon dioxide concentrations (750 ppm CO2 and elevated temperature (ambient +4°C on the abundance of taxonomic and functional microbial genes. Specific quantitative PCR primers were used to target archaeal, bacterial, and cyanobacterial/chloroplast 16S rRNA in both sediment types. Nitrogen cycling genes archaeal and bacterial ammonia monooxygenase (amoA and bacterial nitrite reductase (nirS were specifically targeted to identify changes in microbial gene abundance and potential impacts on nitrogen cycling. In muddy sediment, microbial gene abundance, including amoA and nirS genes, increased under elevated temperature and reduced under elevated CO2 after 28 days, accompanied by shifts in community composition. In contrast, the combined stressor treatment showed a non-additive effect with lower microbial gene abundance throughout the experiment. The response of microbial communities in the sandy sediment was less pronounced, with the most noticeable response seen in the archaeal gene abundances in response to environmental stressors over time. 16S rRNA genes (amoA and nirS were lower in abundance in the combined stressor treatments in sandy sediments. Our results indicated that marine benthic microorganisms, especially in muddy sediments, are susceptible to changes in ocean carbonate chemistry and seawater temperature, which ultimately may have an impact upon key benthic biogeochemical cycles.

A Review on the Assessment of Stress conditions for Simultaneous Production of Microalgal Lipids and Carotenoids

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Amritpreet kaur Minhas

2016-05-01

Full Text Available Microalgal species are potential resource of both biofuels and high-value metabolites, and their production is growth dependent. Growth parameters can be screened for the selection of novel microalgal species that produce molecules of interest. In this context our review confirms that, autotrophic and heterotrophic organisms have demonstrated a dual potential, namely the ability to produce lipids as well as value-added products (particularly carotenoids under influence of various physico-chemical stresses on microalgae. Some species of microalgae can synthesize, besides some pigments, very-long-chain polyunsaturated fatty acids (VL-PUFA,>20C such as docosahexaenoic acid and eicosapentaenoic acid, those have significant applications in food and health. Producing value-added by-products in addition to biofuels, fatty acid methyl esters (FAME, and lipids has the potential to improve microalgae-based biorefineries by employing either the autotrophic or the heterotrophic mode, which could be an offshoot of biotechnology. The review considers the potential of microalgae to produce a range of products and indicates future directions for developing suitable criteria for choosing novel isolates through bioprospecting large gene pool of microalga obtained from various habitats and climatic conditions.

A Review on the Assessment of Stress Conditions for Simultaneous Production of Microalgal Lipids and Carotenoids

Science.gov (United States)

Minhas, Amritpreet K.; Hodgson, Peter; Barrow, Colin J.; Adholeya, Alok

2016-01-01

Microalgal species are potential resource of both biofuels and high-value metabolites, and their production is growth dependent. Growth parameters can be screened for the selection of novel microalgal species that produce molecules of interest. In this context our review confirms that, autotrophic and heterotrophic organisms have demonstrated a dual potential, namely the ability to produce lipids as well as value-added products (particularly carotenoids) under influence of various physico-chemical stresses on microalgae. Some species of microalgae can synthesize, besides some pigments, very-long-chain polyunsaturated fatty acids (VL-PUFA,>20C) such as docosahexaenoic acid and eicosapentaenoic acid, those have significant applications in food and health. Producing value-added by-products in addition to biofuels, fatty acid methyl esters (FAME), and lipids has the potential to improve microalgae-based biorefineries by employing either the autotrophic or the heterotrophic mode, which could be an offshoot of biotechnology. The review considers the potential of microalgae to produce a range of products and indicates future directions for developing suitable criteria for choosing novel isolates through bioprospecting large gene pool of microalga obtained from various habitats and climatic conditions. PMID:27199903

Identifying Sources of Marine Litter

OpenAIRE

VEIGA Joana Mira; FLEET David; KINSEY Sue; NILSSON Per; VLACHOGIANNI Thomais; WERNER Stefanie; GALGANI Francois; THOMPSON Richard; DAGEVOS Jeroen; GAGO Jesus; SOBRAL Paula; CRONIN Richard

2016-01-01

Marine litter is a global problem causing harm to marine wildlife, coastal communities and maritime activities. It also embodies an emerging concern for human health and safety. The reduction of marine litter pollution poses a complex challenge for humankind, requiring adjustments in human behaviour as well as in the different phases of the life-cycle of products and across multiple economic sectors. The Marine Strategy Framework Directive (MSFD) requires European Member States to monitor...

Aggregate formation affects ultrasonic disruption of microalgal cells.

Science.gov (United States)

Wang, Wei; Lee, Duu-Jong; Lai, Juin-Yih

2015-12-01

Ultrasonication is a cell disruption process of low energy efficiency. This study dosed K(+), Ca(2+) and Al(3+) to Chlorella vulgaris cultured in Bold's Basal Medium at 25°C and measured the degree of cell disruption under ultrasonication. Adding these metal ions yielded less negatively charged surfaces of cells, while with the latter two ions large and compact cell aggregates were formed. The degree of cell disruption followed: control=K(+)>Ca(2+)>Al(3+) samples. Surface charges of cells and microbubbles have minimal effects on the microbubble number in the proximity of the microalgal cells. Conversely, cell aggregates with large size and compact interior resist cell disruption under ultrasonication. Staining tests revealed high diffusional resistance of stains over the aggregate interior. Microbubbles may not be effective generated and collapsed inside the compact aggregates, hence leading to low cell disruption efficiencies. Effective coagulation/flocculation in cell harvesting may lead to adverse effect on subsequent cell disruption efficiency. Copyright © 2015 Elsevier Ltd. All rights reserved.

Microalgal process-monitoring based on high-selectivity spectroscopy tools: status and future perspectives

DEFF Research Database (Denmark)

Podevin, Michael Paul Ambrose; Fotidis, Ioannis; Angelidaki, Irini

2018-01-01

microalgae production towards process automation through multivariate process control (MVPC) and software sensors trained on “big data”. The paper will also include a comprehensive overview of off-line implementations of vibrational spectroscopy in microalgal research as it pertains to spectral...... contribution of this review is to present current and prospective advances of on-line and in-line process analytical technology (PAT), with high-selectivity – the capability of monitoring several analytes simultaneously – in the interest of improving product quality, productivity, and process automation...... interpretation and process automation to aid and motivate development....

Assessing the state of pelagic fish communities within an ecosystem approach and the European Marine Strategy Framework Directive

DEFF Research Database (Denmark)

Shephard, Samuel; Rindorf, Anna; Dickey-Collas, Mark

2014-01-01

Pelagic fish are key elements in marine foodwebs and thus comprise an important part of overall ecosystem health. We develop a suite of ecological indicators that track pelagic fish community state and evaluate state of specific objectives against Good Environmental Status (GES) criteria. Indicator...

Understanding the scale of Marine protection in Hawai'i: from community-based management to the remote Northwestern Hawaiian Islands.

Science.gov (United States)

Friedlander, Alan M; Stamoulis, Kostantinos A; Kittinger, John N; Drazen, Jeffrey C; Tissot, Brian N

2014-01-01

Ancient Hawaiians developed a sophisticated natural resource management system that included various forms of spatial management. Today there exists in Hawai'i a variety of spatial marine management strategies along a range of scales, with varying degrees of effectiveness. State-managed no-take areas make up less than 0.4% of nearshore waters, resulting in limited ecological and social benefits. There is increasing interest among communities and coastal stakeholders in integrating aspects of customary Hawaiian knowledge into contemporary co-management. A network of no-take reserves for aquarium fish on Hawai'i Island is a stakeholder-driven, adaptive management strategy that has been successful in achieving ecological objectives and economic benefits. A network of large-scale no-take areas for deepwater (100-400m) bottomfishes suffered from a lack of adequate data during their initiation; however, better technology, more ecological data, and stakeholder input have resulted in improvements and the ecological benefits are becoming clear. Finally, the Papahānaumokuākea Marine National Monument (PMNM) is currently the single largest conservation area in the United States, and one of the largest in the world. It is considered an unqualified success and is managed under a new model of collaborative governance. These case studies allow an examination of the effects of scale on spatial marine management in Hawai'i and beyond that illustrate the advantages and shortcomings of different management strategies. Ultimately a marine spatial planning framework should be applied that incorporates existing marine managed areas to create a holistic, regional, multi-use zoning plan engaging stakeholders at all levels in order to maximize resilience of ecosystems and communities.

Biodiversity of marine communities in Pearl Harbor, Oahu, Hawaii with observations in 1996 on introduced exotic species (NODC Accession 0000330)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The marine and estuarine invertebrate and fish communities in Pearl Harbor, Oahu, Hawaii were surveyed between January and October, 1996. Samples were taken and...

Capturing Early Changes in the Marine Bacterial Community as a Result of Crude Oil Pollution in a Mesocosm Experiment.

Science.gov (United States)

Krolicka, Adriana; Boccadoro, Catherine; Nilsen, Mari Mæland; Baussant, Thierry

2017-12-27

The results of marine bacterial community succession from a short-term study of seawater incubations at 4°C to North Sea crude oil are presented herein. Oil was used alone (O) or in combination with a dispersant (OD). Marine bacterial communities resulting from these incubations were characterized by a fingerprinting analysis and pyrosequencing of the 16S rRNA gene with the aim of 1) revealing differences in bacterial communities between the control, O treatment, and OD treatment and 2) identifying the operational taxonomic units (OTUs) of early responders in order to define the bacterial gene markers of oil pollution for in situ monitoring.After an incubation for 1 d, the distribution of the individual ribotypes of bacterial communities in control and oil-treated (O and OD) tanks differed. Differences related to the structures of bacterial communities were observed at later stages of the incubation. Among the early responders identified (Pseudoalteromonas, Sulfitobacter, Vibrio, Pseudomonas, Glaciecola, Neptunomonas, Methylophaga, and Pseudofulvibacter), genera that utilize a disintegrated biomass or hydrocarbons as well as biosurfactant producers were detected. None of these genera included obligate hydrocarbonoclastic bacteria (OHCB). After an incubation for 1 d, the abundances of Glaciecola and Pseudofulvibacter were approximately 30-fold higher in the OD and O tanks than in the control tank. OTUs assigned to the Glaciecola genus were represented more in the OD tank, while those of Pseudofulvibacter were represented more in the O tank. We also found that 2 to 3% of the structural community shift originated from the bacterial community in the oil itself, with Polaribacter being a dominant bacterium.

Lifting the veil: Impact of contaminants on coastal phytoplankton

NARCIS (Netherlands)

Sjollema, S.B.

2014-01-01

Coastal waters are among the most productive ecosystems on the planet. Yet, they also suffer from a high contaminant load, resulting in a ‘grey veil’ of contaminants. Exposure of microalgal communities to these contaminants potentially results in shifts in microalgal community composition. As

The Impacts of Human Visitation on Mussel Bed Communities Along the California Coast: Are Regulatory Marine Reserves Effective in Protecting These Communities?

Science.gov (United States)

Smith, Jayson R.; Fong, Peggy; Ambrose, Richard F.

2008-04-01

Rocky intertidal habitats frequently are used by humans for recreational, educational, and subsistence-harvesting purposes, with intertidal populations damaged by visitation activities such as extraction, trampling, and handling. California Marine Managed Areas, particularly regulatory marine reserves (MRs), were established to provide legal protection and enhancement of coastal resources and include prohibitions on harvesting intertidal populations. However, the effectiveness of MRs is unclear as enforcement of no-take laws is weak and no regulations protect intertidal species from other detrimental visitor impacts such as trampling. The goal of this study was two-fold: (1) to determine impacts from human visitation on California mussel populations ( Mytilus californianus) and mussel bed community diversity; and (2) to investigate the effectiveness of regulatory MRs in reducing visitor impacts on these populations. Surveys of mussel populations and bed-associated diversity were compared: (1) at sites subjected to either high or low levels of human use, and (2) at sites either unprotected or with regulatory protection banning collecting. At sites subjected to higher levels of human visitation, mussel populations were significantly lower than low-use sites. Comparisons of mussel populations inside and outside of regulatory MRs revealed no consistent pattern suggesting that California no-take regulatory reserves may have limited effectiveness in protecting mussel communities. In areas where many people visit intertidal habitats for purposes other than collecting, many organisms will be affected by trampling, turning of rocks, and handling. In these cases, effective protection of rocky intertidal communities requires an approach that goes beyond the singular focus on collecting to reduce the full suite of impacts.

Marine botany. Second edition

International Nuclear Information System (INIS)

Dawes, C.J.

1998-01-01

Marine plants are a diverse group that include unicellular algae, seaweeds, seagrasses, salt marshes, and mangrove forests. They carry out a variety of ecological functions and serve as the primary producers in coastal wetlands and oceanic waters. The theme that connects such a wide variety of plants is their ecology, which was also emphasized in the 1981 edition. The goal of this revision is to present taxonomic, physiological, chemical, and ecological aspects of marine plants, their adaptations, and how abiotic and biotic factors interact in their communities. The data are presented in a concise, comparative manner in order to identify similarities and differences between communities such as salt marsh and mangroves or subtidal seaweeds and seagrasses. To accomplish this, the text is organized into five chapters that introduce the marine habitats, consider abiotic and biotic factors, and anthropogenic influences on the communities followed by seven chapters that deal with microalgae, seaweeds, salt marshes, mangroves, seagrasses, and coral reefs. Two appendixes are included; one presents simple field techniques and the other is a summary of seaweed uses

Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro in Okinawa Island, Japan

Directory of Open Access Journals (Sweden)

Taha Soliman

2017-12-01

Full Text Available Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan “Kaichu-Doro” Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores (n = 10 from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (<150 m than to other pairs, but now the members of each pair are isolated by the causeway. Each core was 60–80 cm long and was divided into 15-cm layers. We examined the vertical diversity of microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments.

Production of Microalgal Lipids as Biodiesel Feedstock with Fixation of CO2 by Chlorella vulgaris

OpenAIRE

Qiao Hu; Sen-Xiang Zhang; Zhong-Hua Yang; Hao Huang; Rong Zeng

2014-01-01

The global warming and shortage of energy are two critical problems for human social development. CO2 mitigation and replacing conventional diesel with biodiesel are effective routes to reduce these problems. Production of microalgal lipids as biodiesel feedstock by a freshwater microalga, Chlorella vulgaris, with the ability to fixate CO2 is studied in this work. The results show that nitrogen deficiency, CO2 volume fraction and photoperiod are the key factors responsible for the lipid accum...

Ocean Filmmaking Camp @ Duke Marine Lab: Building Community with Ocean Science for a Better World

Science.gov (United States)

De Oca, M.; Noll, S.

2016-02-01

A democratic society requires that its citizens are informed of everyday's global issues. Out of all issues those related to ocean conservation can be hard to grasp for the general public and especially so for disadvantaged racial and ethnic groups. Opportunity-scarce communities generally have more limited access to the ocean and to science literacy programs. The Ocean Filmmaking Camp @ Duke Marine Lab (OFC@DUML) is an effort to address this gap at the level of high school students in a small coastal town. We designed a six-week summer program to nurture the talents of high school students from under-represented communities in North Carolina with training in filmmaking, marine science and conservation. Our science curriculum is especially designed to present the science in a locally and globally-relevant context. Class discussions, field trips and site visits develop the students' cognitive abilities while they learn the value of the natural environment they live in. Through filmmaking students develop their voice and their media literacy, while connecting with their local community, crossing class and racial barriers. By the end of the summer this program succeeds in encouraging students to engage in the democratic process on ocean conservation, climate change and other everyday affairs affecting their local communities. This presentation will cover the guiding principles followed in the design of the program, and how this high impact-low cost program is implemented. In its first year the program was co-directed by a graduate student and a local high school teacher, who managed more than 20 volunteers with a total budget of $1,500. The program's success was featured in the local newspaper and Duke University's Environment Magazine. This program is an example of how ocean science can play a part in building a better world, knitting diverse communities into the fabric of the larger society with engaged and science-literate citizens living rewarding lives.

The radiological exposure of the population of the European Community from radioactivity in North European marine waters Project 'Marina'

International Nuclear Information System (INIS)

1990-01-01

Project Marina was set up by the Commission of the European Communities in 1985 to look at the radiological impact of radionuclides, both natural and anthropogenic, in northern European marine waters. This paper is a summary of project Marina's work and its conclusions

Lipid Production of Heterotrophic Chlorella sp. from Hydrolysate Mixtures of Lipid-Extracted Microalgal Biomass Residues and Molasses.

Science.gov (United States)

Zheng, Hongli; Ma, Xiaochen; Gao, Zhen; Wan, Yiqin; Min, Min; Zhou, Wenguang; Li, Yun; Liu, Yuhuan; Huang, He; Chen, Paul; Ruan, Roger

2015-10-01

This study investigated the feasibility of lipid production of Chlorella sp. from waste materials. Lipid-extracted microalgal biomass residues (LMBRs) and molasses were hydrolyzed, and their hydrolysates were analyzed. Five different hydrolysate mixture ratios (w/w) of LMBRs/molasses (1/0, 1/1, 1/4, 1/9, and 0/1) were used to cultivate Chlorella sp. The results showed that carbohydrate and protein were the two main compounds in the LMBRs, and carbohydrate was the main compound in the molasses. The highest biomass concentration of 5.58 g/L, Y biomass/sugars of 0.59 g/g, lipid productivity of 335 mg/L/day, and Y lipids/sugars of 0.25 g/g were obtained at the hydrolysate mixture ratio of LMBRs/molasses of 1/4. High C/N ratio promoted the conversion of sugars into lipids. The lipids extracted from Chlorella sp. shared similar lipid profile of soybean oil and is therefore a potential viable biodiesel feedstock. These results showed that Chlorella sp. can utilize mixed sugars and amino acids from LMBRs and molasses to accumulate lipids efficiently, thus reducing the cost of microalgal biodiesel production and improving its economic viability.

Strengthened enforcement enhances marine sanctuary performance

Directory of Open Access Journals (Sweden)

Brendan P. Kelaher

2015-01-01

Full Text Available Marine sanctuaries are areas where the extraction of biota is not permitted. Although most marine sanctuaries have a positive influence on biotic communities, not all sanctuaries are meeting their conservation objectives. Amidst possible explanations (e.g., size, age and isolation, insufficient enforcement is often speculated to be a key driver of marine sanctuary underperformance. Despite this, there are few studies directly linking quantitative enforcement data to changes in biotic communities within marine sanctuaries. Here, we used an asymmetrical-BACI experimental design from 2006–2012 to test whether new enforcement initiatives enhanced abundances of target fishes and threatened species in an existing large sub-tropical marine sanctuary relative to areas open to fishing. Implementation of the new enforcement initiatives in 2010 was associated with a 201% increase in annual fine rate and a significant increase in target fish and elasmobranch abundance, as well as sightings of a critically-endangered shark, in the marine sanctuary relative to areas open to fishing. Overall, these results demonstrate that strengthening enforcement can have a rapid positive influence on target fish and perhaps threatened species in a subtropical marine sanctuary. From this, we contend that increased enforcement guided by risk-based compliance planning and operations may be a useful first step for improving underperforming marine sanctuaries.

A robust bioassay to assess the toxicity of metals to the Antarctic marine microalga Phaeocystis antarctica.

Science.gov (United States)

Gissi, Francesca; Adams, Merrin S; King, Catherine K; Jolley, Dianne F

2015-07-01

Despite evidence of contamination in Antarctic coastal marine environments, no water-quality guidelines have been established for the region because of a paucity of biological effects data for local Antarctic species. Currently, there is limited information on the sensitivity of Antarctic microalgae to metal contamination, which is exacerbated by the lack of standard toxicity testing protocols for local marine species. In the present study, a routine and robust toxicity test protocol was developed using the Antarctic marine microalga Phaeocystis antarctica, and its sensitivity was investigated following 10-d exposures to dissolved copper, cadmium, lead, zinc, and nickel. In comparisons of 10% inhibition of population growth rate (IC10) values, P. antarctica was most sensitive to copper (3.3 μg/L), followed by cadmium (135 μg/L), lead (260 μg/L), and zinc (450 μg/L). Although an IC10 value for nickel could not be accurately estimated, the no-observed-effect concentration value for nickel was 1070 μg/L. Exposure to copper and cadmium caused changes in internal cell granularity and increased chlorophyll a fluorescence. Lead, zinc, and nickel had no effect on any of the cellular parameters measured. The present study provides valuable metal-ecotoxicity data for an Antarctic marine microalga, with P. antarctica representing one of the most sensitive microalgal species to dissolved copper ever reported when compared with temperate and tropical species. © 2015 SETAC.

Taxonomic and functional diversity of a coastal planktonic bacterial community in a river-influenced marine area.

Science.gov (United States)

Thiele, Stefan; Richter, Michael; Balestra, Cecilia; Glöckner, Frank Oliver; Casotti, Raffaella

2017-04-01

The Gulf of Naples is a dynamical area with intense exchanges between offshore oligotrophic and coastal eutrophic waters with frequent freshwater inputs. The Sarno River, one of the most polluted rivers in Europe, strongly contributes to the pollution of the area, discharging high amounts of heavy metals and organic wastes from heavily cultivated and industrial areas. This paper reports on the diversity and community structure of the marine residential Bacteria and Archaea of the Gulf of Naples in an area close to the river Sarno plume and investigates their small-scale taxonomic diversity and expression patterns as a proxy of potential metabolic activity using metagenomics and metatranscriptomics. Bacteria and Archaea were mainly represented by marine clades, with only minor contributors from freshwater ones. The community was dominated by Alpha- and Gammaproteobacteria, of which Rhodospirillales, Pelagibacteriales, and Oceanospirilalles were most represented. However, Alteromonadales and Rhodobacterales were the most active, despite their relative lower abundance, suggesting that they are important for overall ecosystem functioning and nutrient cycling. Nitrification and a reversed form of dissimilatory sulfate reduction were the major metabolic processes found in the metatrascriptomes and were mainly associated to Nitrosopumilales and Pelagibacter, respectively. No clear indication of transcripts related to stress induced by heavy metals or organic pollutants was found. In general, despite the high loads of pollutants discharged continuously by the Sarno River, the microbial community did not show marks of stress-induced changes neither structural nor functional, thus suggesting that this river has little or no effect on the planktonic bacterial community of the Gulf of Naples. Copyright © 2016 Elsevier B.V. All rights reserved.

Comparative assessment of various lipid extraction protocols and optimization of transesterification process for microalgal biodiesel production.

Science.gov (United States)

Mandal, Shovon; Patnaik, Reeza; Singh, Amit Kumar; Mallick, Nirupama

2013-01-01

Biodiesel, using microalgae as feedstocks, is being explored as the most potent form of alternative diesel fuel for sustainable economic development. A comparative assessment of various protocols for microalgal lipid extraction was carried out using five green algae, six blue-green algae and two diatom species treated with different single and binary solvents both at room temperature and using a soxhlet. Lipid recovery was maximum with chloroform-methanol in the soxhlet extractor. Pretreatments ofbiomass, such as sonication, homogenization, bead-beating, lyophilization, autoclaving, microwave treatment and osmotic shock did not register any significant rise in lipid recovery. As lipid recovery using chloroform-methanol at room temperature demonstrated a marginally lower value than that obtained under the soxhlet extractor, on economical point of view, the former is recommended for microalgal total lipid extraction. Transesterification process enhances the quality of biodiesel. Experiments were designed to determine the effects of catalyst type and quantity, methanol to oil ratio, reaction temperature and time on the transesterification process using response surface methodology. Fatty acid methyl ester yield reached up to 91% with methanol:HCl:oil molar ratio of 82:4:1 at 65 degrees C for 6.4h reaction time. The biodiesel yield relative to the weight of the oil was found to be 69%.

Production of Microalgal Lipids as Biodiesel Feedstock with Fixation of CO2 by Chlorella vulgaris

Directory of Open Access Journals (Sweden)

Qiao Hu

2014-01-01

Full Text Available The global warming and shortage of energy are two critical problems for human social development. CO2 mitigation and replacing conventional diesel with biodiesel are effective routes to reduce these problems. Production of microalgal lipids as biodiesel feedstock by a freshwater microalga, Chlorella vulgaris, with the ability to fixate CO2 is studied in this work. The results show that nitrogen deficiency, CO2 volume fraction and photoperiod are the key factors responsible for the lipid accumulation in C. vulgaris. With 5 % CO2, 0.75 g/L of NaNO3 and 18:6 h of light/dark cycle, the lipid content and overall lipid productivity reached 14.5 % and 33.2 mg/(L·day, respectively. Furthermore, we proposed a technique to enhance the microalgal lipid productivity by activating acetyl-CoA carboxylase (ACCase with an enzyme activator. Citric acid and Mg2+ were found to be efficient enzyme activators of ACCase. With the addition of 150 mg/L of citric acid or 1.5 mmol/L of MgCl2, the lipid productivity reached 39.1 and 38.0 mg/(L·day, respectively, which was almost twofold of the control. This work shows that it is practicable to produce lipids by freshwater microalgae that can fixate CO2, and provides a potential route to solving the global warming and energy shortage problems.

Ecotoxicological effects of enrofloxacin and its removal by monoculture of microalgal species and their consortium.

Science.gov (United States)

Xiong, Jiu-Qiang; Kurade, Mayur B; Jeon, Byong-Hun

2017-07-01

Enrofloxacin (ENR), a fluoroquinolone antibiotic, has gained big scientific concern due to its ecotoxicity on aquatic microbiota. The ecotoxicity and removal of ENR by five individual microalgae species and their consortium were studied to correlate the behavior and interaction of ENR in natural systems. The individual microalgal species (Scenedesmus obliquus, Chlamydomonas mexicana, Chlorella vulgaris, Ourococcus multisporus, Micractinium resseri) and their consortium could withstand high doses of ENR (≤1 mg L -1 ). Growth inhibition (68-81%) of the individual microalgae species and their consortium was observed in ENR (100 mg L -1 ) compared to control after 11 days of cultivation. The calculated 96 h EC 50 of ENR for individual microalgae species and microalgae consortium was 9.6-15.0 mg ENR L -1 . All the microalgae could recover from the toxicity of high concentrations of ENR during cultivation. The biochemical characteristics (total chlorophyll, carotenoid, and malondialdehyde) were significantly influenced by ENR (1-100 mg L -1 ) stress. The individual microalgae species and microalgae consortium removed 18-26% ENR at day 11. Although the microalgae consortium showed a higher sensitivity (with lower EC 50 ) toward ENR than the individual microalgae species, the removal efficiency of ENR by the constructed microalgae consortium was comparable to that of the most effective microalgal species. Copyright © 2017 Elsevier Ltd. All rights reserved.

Community composition, structure, and interrelationships in the marine intertidal Endocladia muricata – Balanus glandula association in Monterey Bay, California

NARCIS (Netherlands)

Glynn, Peter W.

1965-01-01

Studies of the community composition, structure and species interrelationships of the Endocladia-Balanus association were carried out on the rocky shores at the Hopkins Marine Station, Pacific Grove, California, over the period 1959—1961. The organisms making up this biotic association form a

Using community-level metrics to monitor the effects of marine protected areas on biodiversity.

Science.gov (United States)

Soykan, Candan U; Lewison, Rebecca L

2015-06-01

Marine protected areas (MPAs) are used to protect species, communities, and their associated habitats, among other goals. Measuring MPA efficacy can be challenging, however, particularly when considering responses at the community level. We gathered 36 abundance and 14 biomass data sets on fish assemblages and used meta-analysis to evaluate the ability of 22 distinct community diversity metrics to detect differences in community structure between MPAs and nearby control sites. We also considered the effects of 6 covariates-MPA size and age, MPA size and age interaction, latitude, total species richness, and level of protection-on each metric. Some common metrics, such as species richness and Shannon diversity, did not differ consistently between MPA and control sites, whereas other metrics, such as total abundance and biomass, were consistently different across studies. Metric responses derived from the biomass data sets were more consistent than those based on the abundance data sets, suggesting that community-level biomass differs more predictably than abundance between MPA and control sites. Covariate analyses indicated that level of protection, latitude, MPA size, and the interaction between MPA size and age affect metric performance. These results highlight a handful of metrics, several of which are little known, that could be used to meet the increasing demand for community-level indicators of MPA effectiveness. © 2015 Society for Conservation Biology.

Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina -like nitrite oxidizers dominate the nitrifier community in a marine aquaculture biofilm

DEFF Research Database (Denmark)

Foesel, Bärbel U.; Gieseke, Armin; Schwermer, Carsten

2008-01-01

Zero-discharge marine aquaculture systems are an environmentally friendly alternative to conventional aquaculture. In these systems, water is purified and recycled via microbial biofilters. Here, quantitative data on nitrifier community structure of a trickling filter biofilm associated with a re......Zero-discharge marine aquaculture systems are an environmentally friendly alternative to conventional aquaculture. In these systems, water is purified and recycled via microbial biofilters. Here, quantitative data on nitrifier community structure of a trickling filter biofilm associated...

Protection enhances community and habitat stability: evidence from a mediterranean marine protected area.

Science.gov (United States)

Fraschetti, Simonetta; Guarnieri, Giuseppe; Bevilacqua, Stanislao; Terlizzi, Antonio; Boero, Ferdinando

2013-01-01

Rare evidences support that Marine Protected Areas (MPAs) enhance the stability of marine habitats and assemblages. Based on nine years of observation (2001-2009) inside and outside a well managed MPA, we assessed the potential of conservation and management actions to modify patterns of spatial and/or temporal variability of Posidonia oceanica meadows, the lower midlittoral and the shallow infralittoral rock assemblages. Significant differences in both temporal variations and spatial patterns were observed between protected and unprotected locations. A lower temporal variability in the protected vs. unprotected assemblages was found in the shallow infralittoral, demonstrating that, at least at local scale, protection can enhance community stability. Macrobenthos with long-lived and relatively slow-growing invertebrates and structurally complex algal forms were homogeneously distributed in space and went through little fluctuations in time. In contrast, a mosaic of disturbed patches featured unprotected locations, with small-scale shifts from macroalgal stands to barrens, and harsh temporal variations between the two states. Opposite patterns of spatial and temporal variability were found for the midlittoral assemblages. Despite an overall clear pattern of seagrass regression through time, protected meadows showed a significantly higher shoot density than unprotected ones, suggesting a higher resistance to local human activities. Our results support the assumption that the exclusion/management of human activities within MPAs enhance the stability of the structural components of protected marine systems, reverting or arresting threat-induced trajectories of change.

Biodiesel production by direct transesterification of microalgal biomass with co-solvent.

Science.gov (United States)

Zhang, Yan; Li, Ya; Zhang, Xu; Tan, Tianwei

2015-11-01

In this study, a direct transesterification process using 75% ethanol and co-solvent was studied to reduce the energy consumption of lipid extraction process and improve the conversion yield of the microalgae biodiesel. The addition of a certain amount of co-solvent (n-hexane is most preferable) was required for the direct transesterification of microalgae biomass. With the optimal reaction condition of n-hexane to 75% ethanol volume ratio 1:2, mixed solvent dosage 6.0mL, reaction temperature 90°C, reaction time 2.0h and catalyst volume 0.6mL, the direct transesterification process of microalgal biomass resulted in a high conversion yield up to 90.02±0.55wt.%. Copyright © 2015 Elsevier Ltd. All rights reserved.

An assessment of natural product discovery from marine (sensu strictu) and marine-derived fungi

Science.gov (United States)

Overy, David P.; Bayman, Paul; Kerr, Russell G.; Bills, Gerald F.

2014-01-01

The natural products community has been investigating secondary metabolites from marine fungi for several decades, but when one attempts to search for validated reports of new natural products from marine fungi, one encounters a literature saturated with reports from ‘marine-derived’ fungi. Of the 1000+ metabolites that have been characterized to date, only approximately 80 of these have been isolated from species from exclusively marine lineages. These metabolites are summarized here along with the lifestyle and habitats of their producing organisms. Furthermore, we address some of the reasons for the apparent disconnect between the stated objectives of discovering new chemistry from marine organisms and the apparent neglect of the truly exceptional obligate marine fungi. We also offer suggestions on how to reinvigorate enthusiasm for marine natural products discovery from fungi from exclusive marine lineages and highlight the need for critically assessing the role of apparently terrestrial fungi in the marine environment. PMID:25379338

Modeling the transformation of atmospheric CO2 into microalgal biomass.

Science.gov (United States)

Hasan, Mohammed Fahad; Vogt, Frank

2017-10-23

Marine phytoplankton acts as a considerable sink of atmospheric CO 2 as it sequesters large quantities of this greenhouse gas for biomass production. To assess microalgae's counterbalancing of global warming, the quantities of CO 2 they fix need to be determined. For this task, it is mandatory to understand which environmental and physiological parameters govern this transformation from atmospheric CO 2 to microalgal biomass. However, experimental analyses are challenging as it has been found that the chemical environment has a major impact on the physiological properties of the microalgae cells (diameter typ. 5-20 μm). Moreover, the cells can only chemically interact with their immediate vicinity and thus compound sequestration needs to be studied on a microscopic spatial scale. Due to these reasons, computer simulations are a more promising approach than the experimental studies. Modeling software has been developed that describes the dissolution of atmospheric CO 2 into oceans followed by the formation of HCO 3 - which is then transported to individual microalgae cells. The second portion of this model describes the competition of different cell species for this HCO 3 - , a nutrient, as well as its uptake and utilization for cell production. Two microalgae species, i.e. Dunaliella salina and Nannochloropsis oculata, were cultured individually and in a competition situation under different atmospheric CO 2 conditions. It is shown that this novel model's predictions of biomass production are in very good agreement with the experimental flow cytometry results. After model validation, it has been applied to long-term prediction of phytoplankton generation. These investigations were motivated by the question whether or not cell production slows down as cultures grow. This is of relevance as a reduced cell production rate means that the increase in a culture's CO 2 -sinking capacity slows down as well. One implication resulting from this is that an increase in

Sensing of phosphates by using luminescent Eu(III) and Tb(III) complexes: application to the microalgal cell Chlorella vulgaris.

Science.gov (United States)

Nadella, Sandeep; Sahoo, Jashobanta; Subramanian, Palani S; Sahu, Abhishek; Mishra, Sandhya; Albrecht, Markus

2014-05-12

Phenanthroline-based chiral ligands L(1) and L(2) as well as the corresponding Eu(III) and Tb(III) complexes were synthesized and characterized. The coordination compounds show red and green emission, which was explored for the sensing of a series of anions such as F(-), Cl(-), Br(-), I(-), NO3(-), NO2(-), HPO4(2-), HSO4(-), CH3COO(-), and HCO3(-). Among the anions, HPO4(2-) exhibited a strong response in the emission property of both europium(III) and terbium(III) complexes. The complexes showed interactions with the nucleoside phosphates adenosine triphosphate (ATP), adenosine diphosphate (ADP), and adenosine monophosphate (AMP). Owing to this recognition, these complexes have been applied as staining agents in the microalgal cell Chlorella vulgaris. The stained microalgal cells were monitored through fluorescence microscopy and scanning electron microscopy. Initially, the complexes bind to the outer cell wall and then enter the cell wall through holes in which they probably bind to phospholipids. This leads to a quenching of the luminescence properties. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Dunaliella salina as marine microalga highly tolerant to but a poor remover of cadmium

International Nuclear Information System (INIS)

Folgar, S.; Torres, E.; Perez-Rama, M.; Cid, A.; Herrero, C.; Abalde, J.

2009-01-01

Cadmium tolerance and removal in the marine microalga Dunaliella salina were studied in cultures exposed to different metal concentrations (5-120 mg Cd l -1 ) for 96 h. This microalga can be included in the group of microalgal species most tolerant to cadmium due to the high value of EC50 that it possesses (48.9 mg Cd l -1 at 96 h of culture). The greater percentage of cadmium removed was obtained in cultures exposed to 5 mg Cd l -1 at 96 h, but removing only 11.3% of the added cadmium. In all cultures, the quantity of cadmium removed intracellularly was much lower than the bioadsorbed quantity and it was proportional to the sulfhydryl group levels. Both the Freundlich and Langmuir adsorption models were suitable for describing the short-term biosorption of cadmium by living cells of D. salina.

Conserving biodiversity in a human-dominated world: degradation of marine sessile communities within a protected area with conflicting human uses.

Directory of Open Access Journals (Sweden)

Valeriano Parravicini

Full Text Available Conservation research aims at understanding whether present protection schemes are adequate for the maintenance of ecosystems structure and function across time. We evaluated long-term variation in rocky reef communities by comparing sites surveyed in 1993 and again in 2008. This research took place in Tigullio Gulf, an emblematic case study where various conservation measures, including a marine protected area, have been implemented to manage multiple human uses. Contrary to our prediction that protection should have favored ecosystem stability, we found that communities subjected to conservation measures (especially within the marine protected area exhibited the greatest variation toward architectural complexity loss. Between 1993 and 2008, chronic anthropogenic pressures (especially organic load that had already altered unprotected sites in 1993 expanded their influence into protected areas. This expansion of human pressure likely explains our observed changes in the benthic communities. Our results suggest that adaptive ecosystem-based management (EBM, that is management taking into account human interactions, informed by continuous monitoring, is needed in order to attempt reversing the current trend towards less architecturally complex communities. Protected areas are not sufficient to stop ecosystem alteration by pressures coming from outside. Monitoring, and consequent management actions, should therefore extend to cover the relevant scales of those pressures.

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats.

Science.gov (United States)

Simon, Meinhard; Scheuner, Carmen; Meier-Kolthoff, Jan P; Brinkhoff, Thorsten; Wagner-Döbler, Irene; Ulbrich, Marcus; Klenk, Hans-Peter; Schomburg, Dietmar; Petersen, Jörn; Göker, Markus

2017-06-01

Marine Rhodobacteraceae (Alphaproteobacteria) are key players of biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic environments and are often mutualists of eukaryotes. As 'Roseobacter clade', these 'roseobacters' are assumed to be monophyletic, but non-marine Rhodobacteraceae have not yet been included in phylogenomic analyses. Therefore, we analysed 106 genome sequences, particularly emphasizing gene sampling and its effect on phylogenetic stability, and investigated relationships between marine versus non-marine habitat, evolutionary origin and genomic adaptations. Our analyses, providing no unequivocal evidence for the monophyly of roseobacters, indicate several shifts between marine and non-marine habitats that occurred independently and were accompanied by characteristic changes in genomic content of orthologs, enzymes and metabolic pathways. Non-marine Rhodobacteraceae gained high-affinity transporters to cope with much lower sulphate concentrations and lost genes related to the reduced sodium chloride and organohalogen concentrations in their habitats. Marine Rhodobacteraceae gained genes required for fucoidan desulphonation and synthesis of the plant hormone indole 3-acetic acid and the compatible solutes ectoin and carnitin. However, neither plasmid composition, even though typical for the family, nor the degree of oligotrophy shows a systematic difference between marine and non-marine Rhodobacteraceae. We suggest the operational term 'Roseobacter group' for the marine Rhodobacteraceae strains.

Looking for hotspots of marine metacommunity connectivity: a methodological framework

Science.gov (United States)

Melià, Paco; Schiavina, Marcello; Rossetto, Marisa; Gatto, Marino; Fraschetti, Simonetta; Casagrandi, Renato

2016-03-01

Seascape connectivity critically affects the spatiotemporal dynamics of marine metacommunities. Understanding how connectivity patterns emerge from physically and biologically-mediated interactions is therefore crucial to conserve marine ecosystem functions and biodiversity. Here, we develop a set of biophysical models to explore connectivity in assemblages of species belonging to a typical Mediterranean community (Posidonia oceanica meadows) and characterized by different dispersing traits. We propose a novel methodological framework to synthesize species-specific results into a set of community connectivity metrics and show that spatiotemporal variation in magnitude and direction of the connections, as well as interspecific differences in dispersing traits, are key factors structuring community connectivity. We eventually demonstrate how these metrics can be used to characterize the functional role of each marine area in determining patterns of community connectivity at the basin level and to support marine conservation planning.

Harvesting Environmental Microalgal Blooms for Remediation and Resource Recovery: A Laboratory Scale Investigation with Economic and Microbial Community Impact Assessment

Directory of Open Access Journals (Sweden)

Jagroop Pandhal

2017-12-01

Full Text Available A laboratory based microflotation rig termed efficient FLOtation of Algae Technology (eFLOAT was used to optimise parameters for harvesting microalgal biomass from eutrophic water systems. This was performed for the dual objectives of remediation (nutrient removal and resource recovery. Preliminary experiments demonstrated that chitosan was more efficient than alum for flocculation of biomass and the presence of bacteria could play a positive role and reduce flocculant application rates under the natural conditions tested. Maximum biomass removal from a hyper-eutrophic water retention pond sample was achieved with 5 mg·L−1 chitosan (90% Chlorophyll a removal. Harvesting at maximum rates showed that after 10 days, the bacterial diversity is significantly increased with reduced cyanobacteria, indicating improved ecosystem functioning. The resource potential within the biomass was characterized by 9.02 μg phosphate, 0.36 mg protein, and 103.7 μg lipid per mg of biomass. Fatty acid methyl ester composition was comparable to pure cultures of microalgae, dominated by C16 and C18 chain lengths with saturated, monounsaturated, and polyunsaturated fatty acids. Finally, the laboratory data was translated into a full-size and modular eFLOAT system, with estimated costs as a novel eco-technology for efficient algal bloom harvesting.

Effects of trophic skewing of species richness on ecosystem functioning in a diverse marine community.

Directory of Open Access Journals (Sweden)

Pamela L Reynolds

Full Text Available Widespread overharvesting of top consumers of the world's ecosystems has "skewed" food webs, in terms of biomass and species richness, towards a generally greater domination at lower trophic levels. This skewing is exacerbated in locations where exotic species are predominantly low-trophic level consumers such as benthic macrophytes, detritivores, and filter feeders. However, in some systems where numerous exotic predators have been added, sometimes purposefully as in many freshwater systems, food webs are skewed in the opposite direction toward consumer dominance. Little is known about how such modifications to food web topology, e.g., changes in the ratio of predator to prey species richness, affect ecosystem functioning. We experimentally measured the effects of trophic skew on production in an estuarine food web by manipulating ratios of species richness across three trophic levels in experimental mesocosms. After 24 days, increasing macroalgal richness promoted both plant biomass and grazer abundance, although the positive effect on plant biomass disappeared in the presence of grazers. The strongest trophic cascade on the experimentally stocked macroalgae emerged in communities with a greater ratio of prey to predator richness (bottom-rich food webs, while stronger cascades on the accumulation of naturally colonizing algae (primarily microalgae with some early successional macroalgae that recruited and grew in the mesocosms generally emerged in communities with greater predator to prey richness (the more top-rich food webs. These results suggest that trophic skewing of species richness and overall changes in food web topology can influence marine community structure and food web dynamics in complex ways, emphasizing the need for multitrophic approaches to understand the consequences of marine extinctions and invasions.

Marine habitat mapping at Labuan Marine Park, Federal Territory of Labuan, Malaysia

Science.gov (United States)

Mustajap, Fazliana; Saleh, Ejria; Madin, John; Hamid, Shahimah Abdul

2015-06-01

Marine habitat mapping has recently become essential in coastal marine science research. It is one of the efforts to understand marine ecosystems, and thus to protect them. Habitat mapping is integral to marine-related industries such as fisheries, aquaculture, forestry and tourism. An assessment of marine habitat mapping was conducted at Labuan Marine Park (LMP), a marine protected area in the Federal Territory of Labuan. It is surrounded by shallow water within its islands (Kuraman, Rusukan Kecil and Rusukan Besar) with an area of 39.7 km2. The objectives of the study are to identify the substrate and types of marine habitat present within the park. Side scan sonar (SSS) (Aquascan TM) was used to determine the substrates and habitat while ground truthings were done through field observation and SCUBA diving survey. Seabed classification and marine habitat was based on NOAA's biogeography program. Three substrate types (sand, rock, silt) were identified in this area. The major marine habitats identified are corals, macro algae and small patches of sea grass. The study area is an important refuge for spawning and juvenile fish and supports the livelihood of the coastal communities on Labuan Island. Therefore, proper management is crucial in order to better maintain the marine protected area. The findings are significant and provide detailed baseline information on marine habitat for conservation, protection and future management in LMP.

Databases of the marine metagenomics

KAUST Repository

Mineta, Katsuhiko

2015-10-28

The metagenomic data obtained from marine environments is significantly useful for understanding marine microbial communities. In comparison with the conventional amplicon-based approach of metagenomics, the recent shotgun sequencing-based approach has become a powerful tool that provides an efficient way of grasping a diversity of the entire microbial community at a sampling point in the sea. However, this approach accelerates accumulation of the metagenome data as well as increase of data complexity. Moreover, when metagenomic approach is used for monitoring a time change of marine environments at multiple locations of the seawater, accumulation of metagenomics data will become tremendous with an enormous speed. Because this kind of situation has started becoming of reality at many marine research institutions and stations all over the world, it looks obvious that the data management and analysis will be confronted by the so-called Big Data issues such as how the database can be constructed in an efficient way and how useful knowledge should be extracted from a vast amount of the data. In this review, we summarize the outline of all the major databases of marine metagenome that are currently publically available, noting that database exclusively on marine metagenome is none but the number of metagenome databases including marine metagenome data are six, unexpectedly still small. We also extend our explanation to the databases, as reference database we call, that will be useful for constructing a marine metagenome database as well as complementing important information with the database. Then, we would point out a number of challenges to be conquered in constructing the marine metagenome database.

Investigation of the marine communities of Midway Harbor and adjacent lagoon, Midway Atoll, Northwest Hawaiian Islands in 1998 (NODC Accession 0001098)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — A survey of the marine communities of Midway Atoll harbor and surrounding lagoon was conducted at 12 sites from September 5 to 9, 1998. The primary focus of these...

Molasses wastewater treatment and lipid production at low temperature conditions by a microalgal mutant Scenedesmus sp. Z-4

OpenAIRE

Ma, Chao; Wen, Hanquan; Xing, Defeng; Pei, Xuanyuan; Zhu, Jiani; Ren, Nanqi; Liu, Bingfeng

2017-01-01

Background Simultaneous wastewater treatment and lipid production by oleaginous microalgae show great potential to alleviate energy shortage and environmental pollution, because they exhibit tremendous advantages over traditional activated sludge. Currently, most research on wastewater treatment by microalgal are carried out at optimized temperature conditions (25?35??C), but no information about simultaneous wastewater treatment and lipid production by microalgae at low temperatures has been...

Harvesting microalgae using activated sludge can decrease polymer dosing and enhance methane production via co-digestion in a bacterial-microalgal process

DEFF Research Database (Denmark)

Wágner, Dorottya Sarolta; Radovici, Maria; Smets, Barth F.

2016-01-01

, there is the potential to produce energy by co-digesting the two types of biomass. We present an innovative approach to recover microalgal biomass via a two-step flocculation using bacterial biomass after the destabilisation of microalgae with conventional cationic polymer. A short solids retention time (SRT) enhanced...

Re-envisioning the renewable fuel standard to minimize unintended consequences: A comparison of microalgal diesel with other biodiesels

International Nuclear Information System (INIS)

Soratana, Kullapa; Khanna, Vikas; Landis, Amy E.

2013-01-01

Highlights: • Conducted a life cycle assessment (LCA) of microalgal diesel from PBR to combustion. • Compared the results with other existing LCA results of petroleum and other biodiesels. • Assessed the current Renewable Fuel Standard (RFS2). • Proposed an approach to set emission thresholds for eutrophication (EP) and smog formation potentials (PSP). • Future RFS should include a life-cycle emissions threshold for EP and PSP. - Abstract: The Renewable Fuel Standard 2 (RFS2) program under the Energy Independence and Security Act of 2007 set a life-cycle emission reduction threshold to only greenhouse gas (GHG) emissions; this type of single-dimensional threshold could lead to the unintended trading of one environmental problem for another. Many of the environmental impacts resulting over the life cycle of oil-crop biodiesel fuels manifest in the agricultural phase of production in the form of water quality degradation. This study investigated the extent to which different biofuels meet the RFS GHG requirement, and presents alternative strategies for minimizing unintended consequences. In addition to life-cycle global warming potential (GWP), the eutrophication potential (EP) and photochemical smog formation potential (PSP) from microalgal diesel were compared to the impacts resulting from petroleum-based diesel, soybean diesel and canola diesel. The results showed tradeoffs between GWP and eutrophication potential when microalgal diesel was compared to soybean diesel. Future RFS criteria should include EP and PSP metrics, however establishing thresholds like the GHG management approach may not be appropriate for these other impacts. Two possible strategies to setting life-cycle eutrophication standards are to establish a threshold based on first generation biofuels, as opposed to petro-fuels or to set maximum levels of EP loads for major watersheds or coastal areas. To decrease PSP, together with existing standards for tailpipe emissions, future RFSs

Microalgal Species Selection for Biodiesel Production Based on Fuel Properties Derived from Fatty Acid Profiles

Directory of Open Access Journals (Sweden)

Md. Nurun Nabi

2013-10-01

Full Text Available Physical and chemical properties of biodiesel are influenced by structural features of the fatty acids, such as chain length, degree of unsaturation and branching of the carbon chain. This study investigated if microalgal fatty acid profiles are suitable for biodiesel characterization and species selection through Preference Ranking Organisation Method for Enrichment Evaluation (PROMETHEE and Graphical Analysis for Interactive Assistance (GAIA analysis. Fatty acid methyl ester (FAME profiles were used to calculate the likely key chemical and physical properties of the biodiesel [cetane number (CN, iodine value (IV, cold filter plugging point, density, kinematic viscosity, higher heating value] of nine microalgal species (this study and twelve species from the literature, selected for their suitability for cultivation in subtropical climates. An equal-parameter weighted (PROMETHEE-GAIA ranked Nannochloropsis oculata, Extubocellulus sp. and Biddulphia sp. highest; the only species meeting the EN14214 and ASTM D6751-02 biodiesel standards, except for the double bond limit in the EN14214. Chlorella vulgaris outranked N. oculata when the twelve microalgae were included. Culture growth phase (stationary and, to a lesser extent, nutrient provision affected CN and IV values of N. oculata due to lower eicosapentaenoic acid (EPA contents. Application of a polyunsaturated fatty acid (PUFA weighting to saturation led to a lower ranking of species exceeding the double bond EN14214 thresholds. In summary, CN, IV, C18:3 and double bond limits were the strongest drivers in equal biodiesel parameter-weighted PROMETHEE analysis.

Youth Science Ambassadors: Connecting Indigenous communities with Ocean Networks Canada tools to inspire future ocean scientists and marine resource managers

Science.gov (United States)

Pelz, M.; Hoeberechts, M.; Hale, C.; McLean, M. A.

2017-12-01

This presentation describes Ocean Networks Canada's (ONC) Youth Science Ambassador Program. The Youth Science Ambassadors are a growing network of youth in Canadian coastal communities whose role is to connect ocean science, ONC data, and Indigenous knowledge. By directly employing Indigenous youth in communities in which ONC operates monitoring equipment, ONC aims to encourage wider participation and interest in ocean science and exploration. Further, the Youth Science Ambassadors act as role models and mentors to other local youth by highlighting connections between Indigenous and local knowledge and current marine science efforts. Ocean Networks Canada, an initiative of the University of Victoria, develops, operates, and maintains cabled ocean observatory systems. These include technologies developed on the world-leading NEPTUNE and VENUS observatories as well as community observatories in the Arctic and coastal British Columbia. These observatories, large and small, enable communities, users, scientists, teachers, and students to monitor real-time and historical data from the local marine environment from anywhere on the globe. Youth Science Ambassadors are part of the Learning and Engagement team whose role includes engaging Indigenous communities and schools in ocean science through ONC's K-12 Ocean Sense education program. All of the data collected by ONC are freely available over the Internet for non-profit use, including disaster planning, community-based decision making, and education. The Youth Science Ambassadors support collaboration with Indigenous communities and schools by facilitating educational programming, encouraging participation in ocean data collection and analysis, and fostering interest in ocean science. In addition, the Youth Science Ambassadors support community collaboration in decision-making for instrument deployment locations and identify ways in which ONC can help to address any areas of concern raised by the community. This

Biological Soil Crusts of Arctic Svalbard—Water Availability as Potential Controlling Factor for Microalgal Biodiversity

Directory of Open Access Journals (Sweden)

Nadine Borchhardt

2017-08-01

Full Text Available In the present study the biodiversity of biological soil crusts (BSCs formed by phototrophic organisms were investigated on Arctic Svalbard (Norway. These communities exert several important ecological functions and constitute a significant part of vegetation at high latitudes. Non-diatom eukaryotic microalgal species of BSCs from 20 sampling stations around Ny-Ålesund and Longyearbyen were identified by morphology using light microscopy, and the results revealed a high species richness with 102 species in total. 67 taxa belonged to Chlorophyta (31 Chlorophyceae and 36 Trebouxiophyceae, 13 species were Streptophyta (11 Klebsormidiophyceae and two Zygnematophyceae and 22 species were Ochrophyta (two Eustigmatophyceae and 20 Xanthophyceae. Surprisingly, Klebsormidium strains belonging to clade G (Streptophyta, which were so far described from Southern Africa, could be determined at 5 sampling stations. Furthermore, comparative analyses of Arctic and Antarctic BSCs were undertaken to outline differences in species composition. In addition, a pedological analysis of BSC samples included C, N, S, TP (total phosphorus, and pH measurements to investigate the influence of soil properties on species composition. No significant correlation with these chemical soil parameters was confirmed but the results indicated that pH might affect the BSCs. In addition, a statistically significant influence of precipitation on species composition was determined. Consequently, water availability was identified as one key driver for BSC biodiversity in Arctic regions.

Biological Soil Crusts of Arctic Svalbard-Water Availability as Potential Controlling Factor for Microalgal Biodiversity.

Science.gov (United States)

Borchhardt, Nadine; Baum, Christel; Mikhailyuk, Tatiana; Karsten, Ulf

2017-01-01

In the present study the biodiversity of biological soil crusts (BSCs) formed by phototrophic organisms were investigated on Arctic Svalbard (Norway). These communities exert several important ecological functions and constitute a significant part of vegetation at high latitudes. Non-diatom eukaryotic microalgal species of BSCs from 20 sampling stations around Ny-Ålesund and Longyearbyen were identified by morphology using light microscopy, and the results revealed a high species richness with 102 species in total. 67 taxa belonged to Chlorophyta (31 Chlorophyceae and 36 Trebouxiophyceae), 13 species were Streptophyta (11 Klebsormidiophyceae and two Zygnematophyceae) and 22 species were Ochrophyta (two Eustigmatophyceae and 20 Xanthophyceae). Surprisingly, Klebsormidium strains belonging to clade G (Streptophyta), which were so far described from Southern Africa, could be determined at 5 sampling stations. Furthermore, comparative analyses of Arctic and Antarctic BSCs were undertaken to outline differences in species composition. In addition, a pedological analysis of BSC samples included C, N, S, TP (total phosphorus), and pH measurements to investigate the influence of soil properties on species composition. No significant correlation with these chemical soil parameters was confirmed but the results indicated that pH might affect the BSCs. In addition, a statistically significant influence of precipitation on species composition was determined. Consequently, water availability was identified as one key driver for BSC biodiversity in Arctic regions.

Selective synthesis of human milk fat-style structured triglycerides from microalgal oil in a microfluidic reactor packed with immobilized lipase.

Science.gov (United States)

Wang, Jun; Liu, Xi; Wang, Xu-Dong; Dong, Tao; Zhao, Xing-Yu; Zhu, Dan; Mei, Yi-Yuan; Wu, Guo-Hua

2016-11-01

Human milk fat-style structured triacylglycerols were produced from microalgal oil in a continuous microfluidic reactor packed with immobilized lipase for the first time. A remarkably high conversion efficiency was demonstrated in the microreactor with reaction time being reduced by 8 times, Michaelis constant decreased 10 times, the lipase reuse times increased 2.25-fold compared to those in a batch reactor. In addition, the content of palmitic acid at sn-2 position (89.0%) and polyunsaturated fatty acids at sn-1, 3 positions (81.3%) are slightly improved compared to the product in a batch reactor. The increase of melting points (1.7°C) and decrease of crystallizing point (3°C) implied higher quality product was produced using the microfluidic technology. The main cost can be reduced from $212.3 to $14.6 per batch with the microreactor. Overall, the microfluidic bioconversion technology is promising for modified functional lipids production allowing for cost-effective approach to produce high-value microalgal coproducts. Copyright © 2016 Elsevier Ltd. All rights reserved.

The Development of Coastal and Marine

Directory of Open Access Journals (Sweden)

Suharto Widjojo

2004-01-01

Full Text Available Planning and development process of oastaland marine resources tends centralized and adopted top down policy, without any active participations from coastal and marine communities. In order to reach integrated and sustainable development in coastaland marine areas, people should have both complete and up to date information, so that planning and decision making for all aspect of the environment can be done easily. People should give a high attention of surveis, mappings, as well as science and technology of coastal and marine sectors, in order to change the paradigm of development from inland to coastal and marine. Moreover, people should give high attention of potential resources of coastal and marine areas.

Marine Science

African Journals Online (AJOL)

sustainable coastal development in the region, as well as contributing to the ... between humans and the coastal and marine environment. ... exploitation for timber, fuel wood, aquaculture, urban. Abstract. Given the high dependence of coastal communities on natural resources, mangrove conservation is a challenge in.

Natural acidification changes the timing and rate of succession, alters community structure, and increases homogeneity in marine biofouling communities.

Science.gov (United States)

Brown, Norah E M; Milazzo, Marco; Rastrick, Samuel P S; Hall-Spencer, Jason M; Therriault, Thomas W; Harley, Christopher D G

2018-01-01

Ocean acidification may have far-reaching consequences for marine community and ecosystem dynamics, but its full impacts remain poorly understood due to the difficulty of manipulating pCO 2 at the ecosystem level to mimic realistic fluctuations that occur on a number of different timescales. It is especially unclear how quickly communities at various stages of development respond to intermediate-scale pCO 2 change and, if high pCO 2 is relieved mid-succession, whether past acidification effects persist, are reversed by alleviation of pCO 2 stress, or are worsened by departures from prior high pCO 2 conditions to which organisms had acclimatized. Here, we used reciprocal transplant experiments along a shallow water volcanic pCO 2 gradient to assess the importance of the timing and duration of high pCO 2 exposure (i.e., discrete events at different stages of successional development vs. continuous exposure) on patterns of colonization and succession in a benthic fouling community. We show that succession at the acidified site was initially delayed (less community change by 8 weeks) but then caught up over the next 4 weeks. These changes in succession led to homogenization of communities maintained in or transplanted to acidified conditions, and altered community structure in ways that reflected both short- and longer-term acidification history. These community shifts are likely a result of interspecific variability in response to increased pCO 2 and changes in species interactions. High pCO 2 altered biofilm development, allowing serpulids to do best at the acidified site by the end of the experiment, although early (pretransplant) negative effects of pCO 2 on recruitment of these worms were still detectable. The ascidians Diplosoma sp. and Botryllus sp. settled later and were more tolerant to acidification. Overall, transient and persistent acidification-driven changes in the biofouling community, via both past and more recent exposure, could have important

Inhibitory activities of microalgal extracts against Epstein-Barr Virus (EBV antigen expression in lymphoblastoid cells

Directory of Open Access Journals (Sweden)

Koh Yih Yih

2014-01-01

Full Text Available The inhibitory activities of microalgal extracts against the expression of three EBV antigens, latent membrane protein (LMP1, Epstein-Barr nuclear antigen (EBNA1 and Z Epstein-Barr reactivation activator (ZEBRA were assessed by immunocytochemistry. The observation that the methanol extracts and their fractions from Ankistrodesmus convolutus, Synechococcus elongatus and Spirulina platensis exhibited inhibitory activity against EBV proteins in three Burkitt’s lymphoma cell lines at concentrations as low as 20 μg/ml suggests that microalgae could be a potential source of antiviral compounds against EBV.

Mycosporine-like amino acids are multifunctional molecules in sea hares and their marine community

Science.gov (United States)

Kicklighter, Cynthia E.; Kamio, Michiya; Nguyen, Linh; Germann, Markus W.; Derby, Charles D.

2011-01-01

Molecules of keystone significance are relatively rare, yet mediate a variety of interactions between organisms. They influence the distribution and abundance of species, the transfer of energy across multiple trophic levels, and thus they play significant roles in structuring ecosystems. Despite their potential importance in facilitating our understanding of ecological systems, only three molecules thus far have been proposed as molecules of keystone significance: saxitoxin and dimethyl sulfide in marine communities and tetrodotoxin in riparian communities. In the course of studying the neuroecology of chemical defenses, we identified three mycosporine-like amino acids (MAAs)—N-ethanol palythine (= asterina-330), N-isopropanol palythine (= aplysiapalythine A), and N-ethyl palythine (= aplysiapalythine B)—as intraspecific alarm cues for sea hares (Aplysia californica). These alarm cues are released in the ink secretion of sea hares and cause avoidance behaviors in neighboring conspecifics. Further, we show that these three bioactive MAAs, two [aplysiapalythine A (APA) and -B (APB)] being previously unknown molecules, are present in the algal diet of sea hares and are concentrated in their defensive secretion as well as in their skin. MAAs are known to be produced by algae, fungi, and cyanobacteria and are acquired by many aquatic animals through trophic interactions. MAAs are widely used as sunscreens, among other uses, but sea hares modify their function to serve a previously undocumented role, as intraspecific chemical cues. Our findings highlight the multifunctionality of MAAs and their role in ecological connectivity, suggesting that they may function as molecules of keystone significance in marine ecosystems. PMID:21709250

Comparing marine and terrestrial ecosystems: Implications for the design of coastal marine reserves

Science.gov (United States)

Carr, M.H.; Neigel, J.E.; Estes, J.A.; Andelman, S.; Warner, R.R.; Largier, J. L.

2003-01-01

Concepts and theory for the design and application of terrestrial reserves is based on our understanding of environmental, ecological, and evolutionary processes responsible for biological diversity and sustainability of terrestrial ecosystems and how humans have influenced these processes. How well this terrestrial-based theory can be applied toward the design and application of reserves in the coastal marine environment depends, in part, on the degree of similarity between these systems. Several marked differences in ecological and evolutionary processes exist between marine and terrestrial ecosystems as ramifications of fundamental differences in their physical environments (i.e., the relative prevalence of air and water) and contemporary patterns of human impacts. Most notably, the great extent and rate of dispersal of nutrients, materials, holoplanktonic organisms, and reproductive propagules of benthic organisms expand scales of connectivity among near-shore communities and ecosystems. Consequently, the "openness" of marine populations, communities, and ecosystems probably has marked influences on their spatial, genetic, and trophic structures and dynamics in ways experienced by only some terrestrial species. Such differences appear to be particularly significant for the kinds of organisms most exploited and targeted for protection in coastal marine ecosystems (fishes and macroinvertebrates). These and other differences imply some unique design criteria and application of reserves in the marine environment. In explaining the implications of these differences for marine reserve design and application, we identify many of the environmental and ecological processes and design criteria necessary for consideration in the development of the analytical approaches developed elsewhere in this Special Issue.

Effects on the function of three trophic levels in marine plankton communities under stress from the antifouling compound zinc pyrithione

International Nuclear Information System (INIS)

Hjorth, M.; Dahlloef, I.; Forbes, V.E.

2006-01-01

This study aimed to investigate functional responses of natural marine planktonic communities to stress from the antifouling compound zinc pyrithione (ZPT). Isotope labelling techniques ( 14 C) were applied to study bacterial incorporation of leucine, photosynthetic activity of phytoplankton and grazing of labelled prey by zooplankton communities for 6 days after exposures to nominal concentrations of 0, 5, 25, 50 nM ZPT in a mesocosm experiment in Isefjord, Denmark. Significant direct effects were visible on chlorophyll a concentrations, which decreased in all exposed communities, to between 48 and 36% of control concentrations on Day 3, 1 day after the last exposure. Phytoplankton activities were also significantly affected on Day 3 with activities between 9 and 26% of control levels, as was zooplankton activities in the 25 and 50 nM exposures. In the 50 nM exposure the total community zooplankton activity was reduced to 25 ± 4%, and per individual to 46 ± 11% of control levels. Bacterial communities showed positive indirect effects with high activities (up to 183 ± 40%) due to higher amounts of available substrate from algal death. Pollution induced community tolerance analyses performed on phytoplankton and bacterial communities at the end of the experiment indicated a development of increased tolerance for phytoplankton in the 50 nM exposed communities, whereas there were no changes in tolerance in the bacterial communities. Multivariate analysis of the integrated functional response by the plankton communities revealed a significant difference (p < 0.05) between exposed communities compared to controls in the first 3 days after last exposure and in the end of the experiment. The study provides evidence of diverse effects on the functions of marine plankton communities under stress from a pollutant. Direct effects lead to cascading indirect effects throughout the community, eventually causing different developments. Continuous exposure to ZPT could lead to

Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments

DEFF Research Database (Denmark)

Knoblauch, C.; Jørgensen, BB; Harder, J.

1999-01-01

The numbers of sulfate reducers in two Arctic sediments within situ temperatures of 2.6 and -1.7 degrees C were determined. Most-probable-number counts were higher at 10 degrees C than at 20 degrees C, indicating the predominance of a psychrophilic community. Mean specific sulfate reduction rates...... of 19 isolated psychrophiles were compared to corresponding rates of 9 marine, mesophilic sulfate-reducing bacteria. The results indicate that, as a physiological adaptation to the permanently cold Arctic environment, psychrophilic sulfate reducers have considerably higher specific metabolic rates than...... their mesophilic counterparts at similarly low temperatures....

Nanocellulose size regulates microalgal flocculation and lipid metabolism

Science.gov (United States)

Yu, Sun Il; Min, Seul Ki; Shin, Hwa Sung

2016-01-01

Harvesting of microalgae is a cost-consuming step for biodiesel production. Cellulose has recently been studied as a biocompatible and inexpensive flocculant for harvesting microalgae via surface modifications such as cation-modifications. In this study, we demonstrated that cellulose nanofibrils (CNF) played a role as a microalgal flocculant via its network geometry without cation modification. Sulfur acid-treated tunicate CNF flocculated microalgae, but cellulose nanocrystals (CNC) did not. In addition, desulfurization did not significantly influence the flocculation efficiency of CNF. This mechanism is likely related to encapsulation of microalgae by nanofibrous structure formation, which is derived from nanofibrils entanglement and intra-hydrogen bonding. Moreover, flocculated microalgae were subject to mechanical stress resulting in changes in metabolism induced by calcium ion influx, leading to upregulated lipid synthesis. CNF do not require surface modifications such as cation modified CNC and flocculation is derived from network geometry related to nanocellulose size; accordingly, CNF is one of the least expensive cellulose-based flocculants ever identified. If this flocculant is applied to the biodiesel process, it could decrease the cost of harvest, which is one of the most expensive steps, while increasing lipid production. PMID:27796311

Public perspective towards marine litter in West Aceh City

Science.gov (United States)

Kusumawati, I.; Setyowati, M.; Riana, E.; Prartono, T.

2018-03-01

Marine litter or marine debris is a man-made solid material discarded, abandoned or lost in coastline or into the sea. To reduce the amount of marine litter in the ocean, raising public awareness is an important way. One of the contributing factors on marine litter is the lack of understanding within the community, but to identify how people notice the problem is required adequate research literature. The purpose of this study is to examine the awareness of West Aceh community on marine litter along western coastal area. The research objectives; 1) to evaluate societal perception towards marine litter; 2) to examine the urgent indicator of public awareness in West Aceh City. This study will employ a survey approach by distributing questionnaires to 383 respondents. It was found that respondents show low awareness on marine litter according to statistical data, but there are some rooms to manage in order to raise the level of public awareness. It concludes that sense of responsibility could be enhanced by involving public in any activities for preventing and eradicating marine litter. Education aspect is also important to increase public understanding about the threats of marine debris on environment, human health and economic income.

Microalgal technology for remediation of CO{sub 2} from power plant flue gas: A techno-economic perspective

Energy Technology Data Exchange (ETDEWEB)

Kadam, K.L. [National Renewable Energy Lab., Golden, CO (United States)

1996-12-31

Power plants burning fossil fuels are a major source of CO{sub 2} which is implicated in global warming. Microalgal systems which photosynthetically assimilate carbon dioxide can be used for mitigation of this major greenhouse gas. A techno-economic model was developed for trapping carbon dioxide from flue gases by microalgae in outdoor ponds. The model also shows that algal lipid content and growth rate are both important for an economical process, but a trade-off exists between the two, i.e., a high lipid content and low growth rate combination can be as effective as a low lipid content and high growth rate combination. Hence, these two parameters may be treated as a composite parameter to be optimized to yield the least CO{sub 2} mitigation cost. Model predictions were also used to compare the microalgal technology with alternative technologies in terms of CO{sub 2} mitigation costs. Incorporating advances anticipated in the future into the design basis, the model yields a CO{sub 2} mitigation cost that is competitive with other CO{sub 2} remediation technologies currently being proposed. Furthermore, this technology also provides a lipid feedstock for producing a renewable fuel such as biodiesel. Deployment of this technology for CO{sub 2} mitigation looks attractive if research goals put forth by the model are achieved.

A New, Sensitive Marine Microalgal Recombinant Biosensor Using Luminescence Monitoring for Toxicity Testing of Antifouling Biocides

Science.gov (United States)

Sanchez-Ferandin, Sophie; Leroy, Fanny; Bouget, François-Yves

2013-01-01

In this study, we propose the use of the marine green alga Ostreococcus tauri, the smallest free-living eukaryotic cell known to date, as a new luminescent biosensor for toxicity testing in the environment. Diuron and Irgarol 1051, two antifouling biocides commonly encountered in coastal waters, were chosen to test this new biosensor along with two degradation products of diuron. The effects of various concentrations of the antifoulants on four genetic constructs of O. tauri (based on genes involved in photosynthesis, cell cycle, and circadian clock) were compared using 96-well culture microplates and a luminometer to automatically measure luminescence over 3 days. This was compared to growth inhibition of O. tauri wild type under the same conditions. Luminescence appeared to be more sensitive than growth inhibition as an indicator of toxicity. Cyclin-dependent kinase (CDKA), a protein involved in the cell cycle, fused to luciferase (CDKA-Luc) was found to be the most sensitive of the biosensors, allowing an accurate determination of the 50% effective concentration (EC50) after only 2 days (diuron, 5.65 ± 0.44 μg/liter; Irgarol 1015, 0.76 ± 0.10 μg/liter). The effects of the antifoulants on the CDKA-Luc biosensor were then compared to growth inhibition in natural marine phytoplankton. The effective concentrations of diuron and Irgarol 1051 were found to be similar, indicating that this biosensor would be suitable as a reliable ecotoxicological test. The advantage of this biosensor over cell growth inhibition testing is that the process can be easily automated and could provide a high-throughput laboratory approach to perform short-term toxicity tests. The ability to genetically transform and culture recombinant O. tauri gives it huge potential for screening many other toxic compounds. PMID:23144143

Simultaneous improvement in production of microalgal biodiesel and high-value alpha-linolenic acid by a single regulator acetylcholine

OpenAIRE

Parsaeimehr, Ali; Sun, Zhilan; Dou, Xiao; Chen, Yi-Feng

2015-01-01

Background Photoautotrophic microalgae are a promising avenue for sustained biodiesel production, but are compromised by low yields of biomass and lipids at present. We are developing a chemical approach to improve microalgal accumulation of feedstock lipids as well as high-value alpha-linolenic acid which in turn might provide a driving force for biodiesel production. Results We demonstrate the effectiveness of the small bioactive molecule ?acetylcholine? on accumulation of biomass, total li...

Protist communities in a marine oxygen minimum zone off Costa Rica by 454 pyrosequencing

Science.gov (United States)

Jing, H.; Rocke, E.; Kong, L.; Xia, X.; Liu, H.; Landry, M. R.

2015-08-01

Marine planktonic protists, including microalgae and protistan grazers, are an important contributor to global primary production and carbon and mineral cycles, however, little is known about their population shifts along the oxic-anoxic gradient in the water column. We used 454 pyrosequencing of the 18S rRNA gene and gene transcripts to study the community composition of whole and active protists throughout a water column in the Costa Rica Dome, where a stable oxygen minimum zone (OMZ) exists at a depth of 400~700 m. A clear shift of protist composition from photosynthetic Dinoflagellates in the surface to potential parasitic Dinoflagellates and Ciliates in the deeper water was revealed along the vertical profile at both rRNA and rDNA levels. Those protist groups recovered only at the rDNA level represent either lysed aggregates sinking from the upper waters or potential hosts for parasitic groups. UPGMA clustering demonstrated that total and active protists in the anoxic core of OMZ (550 m) were distinct from those in other water depths. The reduced community diversity and presence of a parasitic/symbiotic trophic lifestyle in the OMZ, especially the anoxic core, suggests that OMZs can exert a selective pressure on protist communities. Such changes in community structure and a shift in trophic lifestyle could result in a modulation of the microbial loop and associated biogeochemical cycling.

Impacts of exotic mangrove forests and mangrove deforestation on carbon remineralization and ecosystem functioning in marine sediments

Science.gov (United States)

Sweetman, A.K.; Middelburg, J.J.; Berle, A.M.; Bernardino, A.F.; Schander, C.; Demopoulos, A.W.J.; Smith, C.R.

2010-01-01

To evaluate how mangrove invasion and removal can modify benthic carbon cycling processes and ecosystem functioning, we used stable-isotopically labelled algae as a deliberate tracer to quantify benthic respiration and C-flow through macrofauna and bacteria in sediments collected from (1) an invasive mangrove forest, (2) deforested mangrove sites 2 and 6 years after removal of above-sediment mangrove biomass, and (3) two mangrove-free, control sites in the Hawaiian coastal zone. Sediment oxygen consumption (SOC) rates were significantly greater in the mangrove and mangrove removal site experiments than in controls and were significantly correlated with total benthic (macrofauna and bacteria) biomass and sedimentary mangrove biomass (SMB). Bacteria dominated short-term C-processing of added microalgal-C and benthic biomass in sediments from the invasive mangrove forest habitat. In contrast, macrofauna were the most important agents in the short-term processing of microalgal-C in sediments from the mangrove removal and control sites. Mean faunal abundance and short term C-uptake rates in sediments from both removal sites were significantly higher than in control cores, which collectively suggest that community structure and short-term C-cycling dynamics in habitats where mangroves have been cleared can remain fundamentally different from un-invaded mudflat sediments for at least 6-yrs following above-sediment mangrove removal. In summary, invasion by mangroves can lead to large shifts in benthic ecosystem function, with sediment metabolism, benthic community structure and short-term C-remineralization dynamics being affected for years following invader removal. ?? 2010 Author(s).

Microbial diversity and stratification of South Pacific abyssal marine sediments.

Science.gov (United States)

Durbin, Alan M; Teske, Andreas

2011-12-01

Abyssal marine sediments cover a large proportion of the ocean floor, but linkages between their microbial community structure and redox stratification have remained poorly constrained. This study compares the downcore gradients in microbial community composition to porewater oxygen and nitrate concentration profiles in an abyssal marine sediment column in the South Pacific Ocean. Archaeal 16S rRNA clone libraries showed a stratified archaeal community that changed from Marine Group I Archaea in the aerobic and nitrate-reducing upper sediment column towards deeply branching, uncultured crenarchaeotal and euryarchaeotal lineages in nitrate-depleted, anaerobic sediment horizons. Bacterial 16S rRNA clone libraries revealed a similar shift on the phylum and subphylum level within the bacteria, from a complex community of Alpha-, Gamma- and Deltaproteobacteria, Actinobacteria and Gemmatimonadetes in oxic surface sediments towards uncultured Chloroflexi and Planctomycetes in the anaerobic sediment column. The distinct stratification of largely uncultured bacterial and archaeal groups within the oxic and nitrate-reducing marine sediment column provides initial constraints for their microbial habitat preferences. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

Effects of conventional and biodegradable microplastics on a marine ecosystem engineer (Arenicola marina) and sediment nutrient cycling

International Nuclear Information System (INIS)

Green, Dannielle Senga; Boots, Bas; Sigwart, Julia; Jiang, Shan; Rocha, Carlos

2016-01-01

Effects of microplastic pollution on benthic organisms and ecosystem services provided by sedimentary habitats are largely unknown. An outdoor mesocosm experiment was done to realistically assess the effects of three different types of microplastic pollution (one biodegradable type; polylactic acid and two conventional types; polyethylene and polyvinylchloride) at increasing concentrations (0.02, 0.2 and 2% of wet sediment weight) on the health and biological activity of lugworms, Arenicola marina (Linnaeus, 1758), and on nitrogen cycling and primary productivity of the sediment they inhabit. After 31 days, A. marina produced less casts in sediments containing microplastics. Metabolic rates of A. marina increased, while microalgal biomass decreased at high concentrations, compared to sediments with low concentrations or without microplastics. Responses were strongest to polyvinylchloride, emphasising that different materials may have differential effects. Each material needs to be carefully evaluated in order to assess their risks as microplastic pollution. Overall, both conventional and biodegradable microplastics in sandy sediments can affect the health and behaviour of lugworms and directly or indirectly reduce primary productivity of these habitats. - Highlights: • Effects of conventional and biodegradable microplastics on lugworm habitats. • 0.2–2% microplastics (by weight) reduced microalgal biomass of sediment. • Biodegradable (PLA) and conventional (HDPE, PVC) microplastics had similar effects. • High doses (2% by sediment weight) of PVC altered metabolism of lugworms. • Microplastics altered burrowing activity of lugworms measured as casts. - Biodegradable and conventional microplastics altered activities of a key marine ecosystem engineer and reduced primary productivity of sandy sediments.

Horizontal gene transfer and mobile genetic elements in marine systems.

Science.gov (United States)

Sobecky, Patricia A; Hazen, Tracy H

2009-01-01

The pool of mobile genetic elements (MGE) in microbial communities consists of viruses, plasmids, and associated elements (insertion sequences, transposons, and integrons) that are either self-transmissible or use mobile plasmids and viruses as vehicles for their dissemination. This mobilome facilitates the horizontal transfer of genes that promote the evolution and adaptation of microbial communities. Efforts to characterize MGEs from microbial populations resident in a variety of ecological habitats have revealed a surprisingly novel and seemingly untapped biodiversity. To better understand the impact of horizontal gene transfer (HGT), as well as the agents that promote HGT in marine ecosystems and to determine whether or not environmental parameters can effect the composition and structure of the mobilome in marine microbial communities, information on the distribution, diversity, and ecological traits of the marine mobilome is presented. In this chapter we discuss recent insights gained from different methodological approaches used to characterize the biodiversity and ecology of MGE in marine environments and their contributions to HGT. In addition, we present case studies that highlight specific HGT examples in coastal, open-ocean, and deep-sea marine ecosystems.

Community photosynthesis of aquatic macrophytes

DEFF Research Database (Denmark)

Binzer, T.; Sand-Jensen, K.; Middelboe, A. L.

2006-01-01

We compared 190 photosynthesis-irradiance (P-E) experiments with single- and multispecies communities of macroalgae and vascular plants from freshwater and marine habitats. We found a typical hyperbolic P-E relation in all communities and no sign of photosaturation or photoinhibition of photosynt......We compared 190 photosynthesis-irradiance (P-E) experiments with single- and multispecies communities of macroalgae and vascular plants from freshwater and marine habitats. We found a typical hyperbolic P-E relation in all communities and no sign of photosaturation or photoinhibition...

Adsorption of marine phycotoxin okadaic acid on a covalent organic framework.

Science.gov (United States)

Salonen, Laura M; Pinela, Sara R; Fernandes, Soraia P S; Louçano, João; Carbó-Argibay, Enrique; Sarriá, Marisa P; Rodríguez-Abreu, Carlos; Peixoto, João; Espiña, Begoña

2017-11-24

Phycotoxins, compounds produced by some marine microalgal species, can reach high concentrations in the sea when a massive proliferation occurs, the so-called harmful algal bloom. These compounds are especially dangerous to human health when concentrated in the digestive glands of seafood. In order to generate an early warning system to alert for approaching toxic outbreaks, it is very important to improve monitoring methods of phycotoxins in aquatic ecosystems. Solid-phase adsorption toxin tracking devices reported thus far based on polymeric resins have not been able to provide an efficient harmful algal bloom prediction system due to their low adsorption capabilities. In this work, a water-stable covalent organic framework (COF) was evaluated as adsorbent for the hydrophobic toxin okadaic acid, one of the most relevant marine toxins and the parental compound of the most common group of toxins responsible for the diarrhetic shellfish poisoning. Adsorption kinetics of okadaic acid onto the COF in seawater showed that equilibrium concentration was reached in only 60min, with a maximum experimental adsorption of 61mgg -1 . Desorption of okadaic acid from the COF was successful with both 70% ethanol and acetonitrile as solvent, and the COF material could be reused with minor losses in adsorption capacity for three cycles. The results demonstrate that COF materials are promising candidates for solid-phase adsorption in water monitoring devices. Copyright © 2017 Elsevier B.V. All rights reserved.

A novel one-stage cultivation/fermentation strategy for improved biogas production with microalgal biomass.

Science.gov (United States)

Klassen, Viktor; Blifernez-Klassen, Olga; Hoekzema, Yoep; Mussgnug, Jan H; Kruse, Olaf

2015-12-10

The use of alga biomass for biogas generation has been studied for over fifty years but until today, several distinct features, like inefficient degradation and low C/N ratios, limit the applicability of algal biomass for biogas production in larger scale. In this work we investigated a novel, one-stage combined cultivation/fermentation strategy including inherently progressing nitrogen starvation conditions to generate improved microalgal biomass substrates. For this strategy, comparable low amounts of nitrogen fertilizers were applied during cultivation and no additional enzymatic, chemical or physical pretreatments had to be performed. The results of this study demonstrate that progressing nitrogen limitation leads to continuously increasing C/N ratios of the biomass up to levels of 24-26 for all three tested alga strains (Chlamydomonas reinhardtii, Parachlorella kessleri and Scenedesmus obliquus). Importantly, the degradation efficiency of the algal cells increased with progressing starvation, leading to strain-specific cell disintegration efficiencies of 35%-100% during the fermentation process. Nitrogen limitation treatment resulted in a 65% increase of biogas yields for C. reinhardtii biomass (max. 698±23mL biogas g(-1) VS) when compared to replete conditions. For P. kessleri and S. obliquus, yields increased by 94% and 106% (max. 706±39mL and 586±36mL biogas g(-1) VS, respectively). From these results we conclude that this novel one-stage cultivation strategy with inherent nitrogen limitation can be used as a pretreatment for microalgal biomass generation, in order to produce accessible substrates with optimized C/N ratios for the subsequent anaerobic fermentation process, thus increasing methane production and avoiding the risk of ammonia inhibition effects within the fermenter. Copyright © 2015 Elsevier B.V. All rights reserved.

Multicellular Features of Phytoplankton

Directory of Open Access Journals (Sweden)

Adi Abada

2018-04-01

Full Text Available Microscopic marine phytoplankton drift freely in the ocean, harvesting sunlight through photosynthesis. These unicellular microorganisms account for half of the primary productivity on Earth and play pivotal roles in the biogeochemistry of our planet (Field et al., 1998. The major groups of microalgae that comprise the phytoplankton community are coccolithophores, diatoms and dinoflagellates. In present oceans, phytoplankton individuals and populations are forced to rapidly adjust, as key chemical and physical parameters defining marine habitats are changing globally. Here we propose that microalgal populations often display the characteristics of a multicellular-like community rather than a random collection of individuals. Evolution of multicellularity entails a continuum of events starting from single cells that go through aggregation or clonal divisions (Brunet and King, 2017. Phytoplankton may be an intermediate state between single cells and aggregates of physically attached cells that communicate and co-operate; perhaps an evolutionary snapshot toward multicellularity. In this opinion article, we journey through several studies conducted in two key phytoplankton groups, coccolithophores and diatoms, to demonstrate how observations in these studies could be interpreted in a multicellular context.

Exploring Social Resilience in Madagascar's Marine Protected Areas

Directory of Open Access Journals (Sweden)

Joshua Cinner

2009-06-01

Full Text Available We examined and compared aspects of local-level resilience in 13 coastal communities within and adjacent to all of Madagascar's national marine protected areas. Our examination of social resilience focused on indicators of the flexibility of household livelihood portfolios and both formal and informal governance institutions, the capacity of communities to organize, their capacity to learn, and access to household assets and community infrastructure. In general, we found high levels of flexibility in formal institutions and livelihood portfolios and high levels of participation in decision-making and community groups. Together, these indicators suggest some latent capacity to adaptively manage resources, but this capacity may be offset by poor levels of trust between communities and resource managers, a poor understanding of the ways in which humans affect marine resources, inadequate feedback of ecological monitoring to communities, inflexibility in informal governance institutions, and a lack of assets to draw upon. We suggest that building desirable resilience in Madagascar's marine protected areas will require the following: investments in community-level infrastructure, projects to generate household income, and enhanced agricultural production to improve the well-being of communities; improvements in the capacity to learn through investments in formal and informal education; enhanced trust between park staff and local communities; empowerment of communities to govern and enforce natural resources; the increased accountability of leaders and transparency of governance processes; adequate cross-scale interaction with local, provincial, and national institutions; and the pursuit of these activities in ways that capitalize on community-specific strengths, such as high flexibility and the presence of sociocultural institutions such as taboos that regulate resource use.

Molecular characterization of two microalgal strains in Egypt and investigation of the antimicrobial activity of their extracts

Directory of Open Access Journals (Sweden)

El Semary, NA.

2013-01-01

Full Text Available The emergence of new pathogens and the increasing drug-resistance of recognized ones pose a difficult challenge. One way that this challenge is being addressed is through the discovery of new cost-effective drug resources in the form of bioactive compounds. Algae represent a promising source of bioactive compounds in this regard. In the present research, we used molecular and phylogenetic analysis to isolate and identify two microalgal strains. We found that one strain belonged to the phylum chrysophyta and the other to the cyanobacteria. We also investigated the antimicrobial activity of some of the lipophilic extracts of the two microalgal strains. Several fractions showed high individual antimicrobial bioactivity against multidrug-resistant Salmonella sp., Citrobacter sp., Aspergillus niger and Aspergillus flavus. Fraction III from Poterioochromonas malhamensis showed the highest level of activity against two multidrug-resistant bacterial pathogens. The inhibition zone diameter was 1.4 cm for Salmonella and 1.4 cm for Citrobacter. Meanwhile, another lipophilic fraction from the cyanobacterium Synechocystis salina showed broad-spectrum bioactivity (inhibition zone diameter of 0.9 cm for Aspergillus niger, 1 cm for Citrobacter and 0.9 cm for Salmonella. One lipophilic fraction from Aphanizomenon showed antifungal bioactivity against Aspergillus niger and Aspergillus flavus, where the inhibition zone diameter was 1.1 cm and 1.0 cm, respectively. The study highlights the antimicrobial bioactivity of extracts from local microalgae and emphasizes the importance of carrying out screening programs for those microorganisms.

The tropicalization of temperate marine ecosystems: climate-mediated changes in herbivory and community phase shifts

Science.gov (United States)

Vergés, Adriana; Steinberg, Peter D.; Hay, Mark E.; Poore, Alistair G. B.; Campbell, Alexandra H.; Ballesteros, Enric; Heck, Kenneth L.; Booth, David J.; Coleman, Melinda A.; Feary, David A.; Figueira, Will; Langlois, Tim; Marzinelli, Ezequiel M.; Mizerek, Toni; Mumby, Peter J.; Nakamura, Yohei; Roughan, Moninya; van Sebille, Erik; Gupta, Alex Sen; Smale, Dan A.; Tomas, Fiona; Wernberg, Thomas; Wilson, Shaun K.

2014-01-01

Climate-driven changes in biotic interactions can profoundly alter ecological communities, particularly when they impact foundation species. In marine systems, changes in herbivory and the consequent loss of dominant habitat forming species can result in dramatic community phase shifts, such as from coral to macroalgal dominance when tropical fish herbivory decreases, and from algal forests to ‘barrens’ when temperate urchin grazing increases. Here, we propose a novel phase-shift away from macroalgal dominance caused by tropical herbivores extending their range into temperate regions. We argue that this phase shift is facilitated by poleward-flowing boundary currents that are creating ocean warming hotspots around the globe, enabling the range expansion of tropical species and increasing their grazing rates in temperate areas. Overgrazing of temperate macroalgae by tropical herbivorous fishes has already occurred in Japan and the Mediterranean. Emerging evidence suggests similar phenomena are occurring in other temperate regions, with increasing occurrence of tropical fishes on temperate reefs. PMID:25009065

Marine products with anti-protozoal activity: a review.

Science.gov (United States)

García, Marley; Monzote, Lianet

2014-01-01

The marine organisms are a rich source of varied natural products with unique functionality. A variety of natural products of new molecular structures with diverse biological activities have been reported from marine flora and fauna for treatment and/or prevention of human diseases. The present review briefly illustrates current status of marine products as antiprotozoal agents. The in vitro and in vivo studies of marine algae, invertebrates and micro-organism against different protozoa parasites are included. The marine products studied, according to international criterions for selection of more promisory products in the different models reported, demonstrated their potentialities as antiprozoal agents. Herein, the interest of scientific community to search new alternatives from marine environment has been demonstrated.

Enzymatic Processes in Marine Biotechnology.

Science.gov (United States)

Trincone, Antonio

2017-03-25

In previous review articles the attention of the biocatalytically oriented scientific community towards the marine environment as a source of biocatalysts focused on the habitat-related properties of marine enzymes. Updates have already appeared in the literature, including marine examples of oxidoreductases, hydrolases, transferases, isomerases, ligases, and lyases ready for food and pharmaceutical applications. Here a new approach for searching the literature and presenting a more refined analysis is adopted with respect to previous surveys, centering the attention on the enzymatic process rather than on a single novel activity. Fields of applications are easily individuated: (i) the biorefinery value-chain, where the provision of biomass is one of the most important aspects, with aquaculture as the prominent sector; (ii) the food industry, where the interest in the marine domain is similarly developed to deal with the enzymatic procedures adopted in food manipulation; (iii) the selective and easy extraction/modification of structurally complex marine molecules, where enzymatic treatments are a recognized tool to improve efficiency and selectivity; and (iv) marine biomarkers and derived applications (bioremediation) in pollution monitoring are also included in that these studies could be of high significance for the appreciation of marine bioprocesses.

Reactive Leadership: Divining, Developing, and Demonstrating Community Ontologies

Science.gov (United States)

Graybeal, J.

2008-12-01

The Marine Metadata Interoperability Project (known as MMI, on the web at http://marinemetadata.org) was formed to provide leadership in metadata practices to the marine science community. In 2004 this meant finding and writing about resources and best practices, which until then were all but invisible. In 2008 the scope is far wider, encompassing comprehensive guidance, collaborative community environments, and introduction and demonstration of advanced technologies to an increasingly interested scientific domain. MMI's technical leadership, based on experiences gained in the hydrologic community, emphasized the role ontologies could play in marine science. An early MMI workshop successfully incorporated a large number of community vocabularies, tools to harmonize them in a common ontological format, and the mapping of terms from vocabularies expressed in that format. That 2005 workshop demonstrated the connections to be made among different community vocabularies, and was well regarded by participants, but did not lead to widespread adoption of the tools, technologies, or even the vocabularies. Ontology development efforts for marine sensors and platforms showed intermittent progress, but again were not adopted or pushed toward completion. It is now 2008, and the marine community is increasingly attentive to a wide range of interoperability issues. A large part of the community has at least heard of "semantic interoperability", and many understand its critical role in finding and working with data. Demand for specific solutions, and for workable approaches, is becoming more vocal in the marine community. Yet there is still no encompassing model in place for achieving semantic interoperability, only simple operational registries have been set up for oceanographic community vocabularies, and only a few isolated applications demonstrate how semantic barriers can be overcome. Why has progress been so slow? Are good answers on the horizon? And if we build it, will the

Marine Invertebrates: Communities at Risk

Directory of Open Access Journals (Sweden)

Jennifer Mather

2013-06-01

Full Text Available Our definition of the word ‘animal’ centers on vertebrates, yet 99% of the animals on the planet are invertebrates, about which we know little. In addition, although the Census of Marine Life (COML.org has recently conducted an extensive audit of marine ecosystems, we still do not understand much about the animals of the seas. Surveys of the best-known ecosystems, in which invertebrate populations often play a key role, show that the invertebrate populations are affected by human impact. Coral animals are the foundation of coral reef systems, which are estimated to contain 30% of the species in the ocean. Physical impact and chemical changes on the water severely damage these reefs, and may lead to the removal of these important habitats. Tiny pteropod molluscs live in huge numbers in the polar seas, and their fragile shells are particularly vulnerable to ocean acidification. Their removal would mean that fishes on which we depend would have a hugely diminished food supply. In the North Sea, warming is leading to replacement of colder water copepods by warmer water species which contain less fat. This is having an effect on the birds which eat them, who enrich the otherwise poor land on which they nest. Conversely, the warming of the water and the loss of top predators such as whales and sharks has led to an explosion of the jumbo squid of the Pacific coast of North America. This is positive in the development of a squid fishery, yet negative because the squid eat fish that have been the mainstay of the fishery along that coast. These examples show how invertebrates are key in the oceans, and what might happen when global changes impact them.

Marine invertebrates: communities at risk.

Science.gov (United States)

Mather, Jennifer

2013-06-10

Our definition of the word 'animal' centers on vertebrates, yet 99% of the animals on the planet are invertebrates, about which we know little. In addition, although the Census of Marine Life (COML.org) has recently conducted an extensive audit of marine ecosystems, we still do not understand much about the animals of the seas. Surveys of the best-known ecosystems, in which invertebrate populations often play a key role, show that the invertebrate populations are affected by human impact. Coral animals are the foundation of coral reef systems, which are estimated to contain 30% of the species in the ocean. Physical impact and chemical changes on the water severely damage these reefs, and may lead to the removal of these important habitats. Tiny pteropod molluscs live in huge numbers in the polar seas, and their fragile shells are particularly vulnerable to ocean acidification. Their removal would mean that fishes on which we depend would have a hugely diminished food supply. In the North Sea, warming is leading to replacement of colder water copepods by warmer water species which contain less fat. This is having an effect on the birds which eat them, who enrich the otherwise poor land on which they nest. Conversely, the warming of the water and the loss of top predators such as whales and sharks has led to an explosion of the jumbo squid of the Pacific coast of North America. This is positive in the development of a squid fishery, yet negative because the squid eat fish that have been the mainstay of the fishery along that coast. These examples show how invertebrates are key in the oceans, and what might happen when global changes impact them.

Multiple Drivers of Local (Non- Compliance in Community-Based Marine Resource Management: Case Studies from the South Pacific

Directory of Open Access Journals (Sweden)

Janne R. Rohe

2017-05-01

Full Text Available The outcomes of marine conservation and related management interventions depend to a large extent on people's compliance with these rule systems. In the South Pacific, community-based marine resource management (CBMRM has gained wide recognition as a strategy for the sustainable management of marine resources. In current practice, CBMRM initiatives often build upon customary forms of marine governance, integrating scientific advice and management principles in collaboration with external partners. However, diverse socio-economic developments as well as limited legal mandates can challenge these approaches. Compliance with and effective (legally-backed enforcement of local management strategies constitute a growing challenge for communities—often resulting in considerable impact on the success or failure of CBMRM. Marine management arrangements are highly dynamic over time, and similarly compliance with rule systems tends to change depending on context. Understanding the factors contributing to (non- compliance in a given setting is key to the design and function of adaptive management approaches. Yet, few empirical studies have looked in depth into the dynamics around local (non- compliance with local marine tenure rules under the transforming management arrangements. Using two case studies from Solomon Islands and Fiji, we investigate what drives local (non- compliance with CBMRM and what hinders or supports its effective enforcement. The case studies reveal that non-compliance is mainly driven by: (1 diminishing perceived legitimacy of local rules and rule-makers; (2 increased incentives to break rules due to market access and/ or lack of alternative income; and (3 relatively weak enforcement of local rules (i.e., low perceptions of risk from sanctions for rule-breaking. These drivers do not stand alone but can act together and add up to impair effective management. We further analyze how enforcement of CBMRM is challenged through a range of

Effects of the antibiotic ciprofloxacin on the bacterial community structure and degradation of pyrene in marine sediment

International Nuclear Information System (INIS)

Naeslund, Johan; Hedman, Jenny E.; Agestrand, Cecilia

2008-01-01

The ecological consequences of antibiotics in the aquatic environment have been an issue of concern over the past years due to the potential risk for negative effects on indigenous microorganisms. Microorganisms provide important ecosystem services, such as nutrient recycling, organic matter mineralization and degradation of pollutants. In this study, effects of exposure to the antibiotic ciprofloxacin on the bacterial diversity and pollutant degradation in natural marine sediments were studied using molecular methods (T-RFLP) in combination with radiorespirometry. In a microcosm experiment, sediment spiked with 14 C-labelled pyrene was exposed to five concentrations of ciprofloxacin (0, 20, 200, 1000 and 2000 μg L -1 ) in a single dose to the overlying water. The production of 14 CO 2 (i.e. complete mineralization of pyrene) was measured during 11 weeks. Sediment samples for bacterial community structure analysis were taken after 7 weeks. Results showed a significant dose-dependent inhibition of pyrene mineralization measured as the total 14 CO 2 production. The nominal EC 50 was calculated to 560 μg L -1 , corresponding to 0.4 μg/kg d.w. sediment. The lowest effect concentration on the bacterial community structure was 200 μg L -1 , which corresponds to 0.1 μg/kg d.w. sediment. Our results show that antibiotic pollution can be a potential threat to both bacterial diversity and an essential ecosystem service they perform in marine sediment

Enhanced biodiversity beyond marine reserve boundaries: the cup spillith over.

Science.gov (United States)

Russ, Garry R; Alcala, Angel C

2011-01-01

Overfishing can have detrimental effects on marine biodiversity and the structure of marine ecosystems. No-take marine reserves (NTMRs) are much advocated as a means of protecting biodiversity and ecosystem structure from overharvest. In contrast to terrestrial protected areas, NTMRs are not only expected to conserve or recover biodiversity and ecosystems within their boundaries, but also to enhance biodiversity beyond their boundaries by exporting species richness and more complex biological communities. Here we show that species richness of large predatory reef fish increased fourfold and 11-fold inside two Philippine no-take marine reserves over 14 and 25 years, respectively. Outside one reserve (Apo) the species richness also increased. This increase beyond the Apo reserve boundary was 78% higher closer to the boundary (200-250 m) than farther from it (250-500 m). The increase in richness beyond the boundary could not be explained by improvements over time in habitat or prey availability. Furthermore, community composition of predatory fish outside but close to (200-250 m) the Apo reserve became very similar to that inside the reserve over time, almost converging with it in multivariate space after 26 years of reserve protection. This is consistent with the suggestion that, as community composition inside Apo reserve increased in complexity, this complexity spilled over the boundary into nearby fished areas. Clearly, the spillover of species richness and community complexity is a direct consequence of the spillover of abundance of multiple species. However, this spillover of species richness and community complexity demonstrates an important benefit of biodiversity and ecosystem export from reserves, and it provides hope that reserves can help to reverse the decline of marine ecosystems and biodiversity.

Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters

NARCIS (Netherlands)

Hardoim, C.C.P.; Costa, R.; Araujo, F. V.; Hajdu, E.; Peixoto, R.; Lins, U.; Rosado, A. S.; van Elsas, J. D.

2009-01-01

Microorganisms can account for up to 60% of the fresh weight of marine sponges. Marine sponges have been hypothesized to serve as accumulation spots of particular microbial communities, but it is unknown to what extent these communities are directed by the organism or the site or occur randomly. To

Structural changes of marine communities over the Permian-Triassic transition: Ecologically assessing the end-Permian mass extinction and its aftermath

Science.gov (United States)

Chen, Zhong-Qiang; Tong, Jinnan; Liao, Zhuo-Ting; Chen, Jing

2010-08-01

The Permian/Triassic (P/Tr) transition is ecologically assessed based on examining 23 shelly communities from five shallow platform, ramp and shelf basin facies Permian-Triassic boundary (PTB) sections in South China. The shelly communities have undergone two major collapses coinciding with the two episodes of the end-Permian mass extinction. The first P/Tr extinction event devastated shelly communities in all types of settings to some extent. The basin communities have been more severely impacted than both platform and ramp communities. The survival faunas have rebounded more rapidly in shallow niches than in relatively deep habitats. The second P/Tr crisis destroyed the survival communities in shallow setting and had little impact on the basin communities in terms of community structures. The early Griesbachian communities are overall low-diversity and high-dominance. The governorship switch from brachiopods to bivalves in marine communities has been facilitated by two pulses of the end-Permian mass extinction and the whole takeover process took about 200 ka across the P/Tr boundary. Bivalve ecologic takeover initially occurred immediately after the first P/Tr extinction in shallow water habitats and was eventually completed in all niches after the second P/Tr event. Some post-extinction communities have the irregular rarefaction curves due to the unusual community structures rather than sampling intensities.

Effect of microalgal treatments on pesticides in water.

Science.gov (United States)

Hultberg, Malin; Bodin, Hristina; Ardal, Embla; Asp, Håkan

2016-01-01

The effect of the microalgae Chlorella vulgaris on a wide range of different pesticides in water was studied. Treatments included short-term exposure (1 h) to living and dead microalgal biomass and long-term exposure (4 days) to actively growing microalgae. The initial pesticide concentration was 63.5 ± 3.9 µg L(-1). There was no significant overall reduction of pesticides after short-term exposure. A significant reduction of the total amount of pesticides was achieved after the long-term exposure to growing microalgae (final concentration 29.7 ± 1.0 µg L(-1)) compared with the long-term control (37.0 ± 1.2 µg L(-1)). The concentrations of 10 pesticides out of 38 tested were significantly lowered in the long-term algal treatment. A high impact of abiotic factors such as sunlight and aeration for pesticide reduction was observed when the initial control (63.5 ± 3.9 µg L(-1)) and the long-term control (37.0 ± 1.2 µg L(-1)) were compared. The results suggest that water treatment using microalgae, natural inhabitants of polluted surface waters, could be further explored not only for removal of inorganic nutrients but also for removal of organic pollutants in water.

Sustainability Entrepreneurship in marine protected areas

OpenAIRE

Bush, S.R.; Bottema, Mariska; Midavaine, J.J.; Carter, E.

2017-01-01

So called ‘entrepreneurial marine protected areas’ are one way in which private actors are setting and enforcing control over spatially contiguous marine habitats. These entrepreneurs fulfil both environmental and social outcomes, providing a sustainable source of funding for conservation and restoration activities, as well as interacting with communities dependent on these resources. In doing so they contribute to the conservation of public resources. But unlike state-led management, the suc...

Direct quantification of fatty acids in wet microalgal and yeast biomass via a rapid in situ fatty acid methyl ester derivatization approach.

Science.gov (United States)

Dong, Tao; Yu, Liang; Gao, Difeng; Yu, Xiaochen; Miao, Chao; Zheng, Yubin; Lian, Jieni; Li, Tingting; Chen, Shulin

2015-12-01

Accurate determination of fatty acid contents is routinely required in microalgal and yeast biofuel studies. A method of rapid in situ fatty acid methyl ester (FAME) derivatization directly from wet fresh microalgal and yeast biomass was developed in this study. This method does not require prior solvent extraction or dehydration. FAMEs were prepared with a sequential alkaline hydrolysis (15 min at 85 °C) and acidic esterification (15 min at 85 °C) process. The resulting FAMEs were extracted into n-hexane and analyzed using gas chromatography. The effects of each processing parameter (temperature, reaction time, and water content) upon the lipids quantification in the alkaline hydrolysis step were evaluated with a full factorial design. This method could tolerate water content up to 20% (v/v) in total reaction volume, which equaled up to 1.2 mL of water in biomass slurry (with 0.05-25 mg of fatty acid). There were no significant differences in FAME quantification (p>0.05) between the standard AOAC 991.39 method and the proposed wet in situ FAME preparation method. This fatty acid quantification method is applicable to fresh wet biomass of a wide range of microalgae and yeast species.

Madagascar's nascent locally managed marine area network

African Journals Online (AJOL)

communication, raise the profile and expand the use of the ... community - led approaches to conservation in Madagascar and ... Fishing communities have been managing marine resources in ... munities are finding that once abundant resources are dwin- .... per closure and lead to an enhancement in catch per unit effort.

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris.

Science.gov (United States)

Oberbeckmann, Sonja; Osborn, A Mark; Duhaime, Melissa B

2016-01-01

Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate) (PET) drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5-6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae-all known to degrade complex carbon substrates) and diatoms (e.g. Coscinodiscophytina, Bacillariophytina). The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm) communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact with the PET

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris

Science.gov (United States)

Osborn, A. Mark

2016-01-01

Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate) (PET) drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5–6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae—all known to degrade complex carbon substrates) and diatoms (e.g. Coscinodiscophytina, Bacillariophytina). The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm) communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact with the

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris.

Directory of Open Access Journals (Sweden)

Sonja Oberbeckmann

Full Text Available Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate (PET drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5-6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae-all known to degrade complex carbon substrates and diatoms (e.g. Coscinodiscophytina, Bacillariophytina. The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact

Evidence That Marine Reserves Enhance Resilience to Climatic Impacts

Science.gov (United States)

Micheli, Fiorenza; Saenz-Arroyo, Andrea; Greenley, Ashley; Vazquez, Leonardo; Espinoza Montes, Jose Antonio; Rossetto, Marisa; De Leo, Giulio A.

2012-01-01

Establishment of marine protected areas, including fully protected marine reserves, is one of the few management tools available for local communities to combat the deleterious effect of large scale environmental impacts, including global climate change, on ocean ecosystems. Despite the common hope that reserves play this role, empirical evidence of the effectiveness of local protection against global problems is lacking. Here we show that marine reserves increase the resilience of marine populations to a mass mortality event possibly caused by climate-driven hypoxia. Despite high and widespread adult mortality of benthic invertebrates in Baja California, Mexico, that affected populations both within and outside marine reserves, juvenile replenishment of the species that supports local economies, the pink abalone Haliotis corrugata, remained stable within reserves because of large body size and high egg production of the protected adults. Thus, local protection provided resilience through greater resistance and faster recovery of protected populations. Moreover, this benefit extended to adjacent unprotected areas through larval spillover across the edges of the reserves. While climate change mitigation is being debated, coastal communities have few tools to slow down negative impacts of global environmental shifts. These results show that marine protected areas can provide such protection. PMID:22855690

Evidence that marine reserves enhance resilience to climatic impacts.

Directory of Open Access Journals (Sweden)

Fiorenza Micheli

Full Text Available Establishment of marine protected areas, including fully protected marine reserves, is one of the few management tools available for local communities to combat the deleterious effect of large scale environmental impacts, including global climate change, on ocean ecosystems. Despite the common hope that reserves play this role, empirical evidence of the effectiveness of local protection against global problems is lacking. Here we show that marine reserves increase the resilience of marine populations to a mass mortality event possibly caused by climate-driven hypoxia. Despite high and widespread adult mortality of benthic invertebrates in Baja California, Mexico, that affected populations both within and outside marine reserves, juvenile replenishment of the species that supports local economies, the pink abalone Haliotis corrugata, remained stable within reserves because of large body size and high egg production of the protected adults. Thus, local protection provided resilience through greater resistance and faster recovery of protected populations. Moreover, this benefit extended to adjacent unprotected areas through larval spillover across the edges of the reserves. While climate change mitigation is being debated, coastal communities have few tools to slow down negative impacts of global environmental shifts. These results show that marine protected areas can provide such protection.

Large recovery of fish biomass in a no-take marine reserve.

Directory of Open Access Journals (Sweden)

Octavio Aburto-Oropeza

Full Text Available No-take marine reserves are effective management tools used to restore fish biomass and community structure in areas depleted by overfishing. Cabo Pulmo National Park (CPNP was created in 1995 and is the only well enforced no-take area in the Gulf of California, Mexico, mostly because of widespread support from the local community. In 1999, four years after the establishment of the reserve, there were no significant differences in fish biomass between CPNP (0.75 t ha(-1 on average and other marine protected areas or open access areas in the Gulf of California. By 2009, total fish biomass at CPNP had increased to 4.24 t ha(-1 (absolute biomass increase of 3.49 t ha(-1, or 463%, and the biomass of top predators and carnivores increased by 11 and 4 times, respectively. However, fish biomass did not change significantly in other marine protected areas or open access areas over the same time period. The absolute increase in fish biomass at CPNP within a decade is the largest measured in a marine reserve worldwide, and it is likely due to a combination of social (strong community leadership, social cohesion, effective enforcement and ecological factors. The recovery of fish biomass inside CPNP has resulted in significant economic benefits, indicating that community-managed marine reserves are a viable solution to unsustainable coastal development and fisheries collapse in the Gulf of California and elsewhere.

Marine metagenomics: strategies for the discovery of novel enzymes with biotechnological applications from marine environments

Directory of Open Access Journals (Sweden)

Dobson Alan DW

2008-08-01

Full Text Available Abstract Metagenomic based strategies have previously been successfully employed as powerful tools to isolate and identify enzymes with novel biocatalytic activities from the unculturable component of microbial communities from various terrestrial environmental niches. Both sequence based and function based screening approaches have been employed to identify genes encoding novel biocatalytic activities and metabolic pathways from metagenomic libraries. While much of the focus to date has centred on terrestrial based microbial ecosystems, it is clear that the marine environment has enormous microbial biodiversity that remains largely unstudied. Marine microbes are both extremely abundant and diverse; the environments they occupy likewise consist of very diverse niches. As culture-dependent methods have thus far resulted in the isolation of only a tiny percentage of the marine microbiota the application of metagenomic strategies holds great potential to study and exploit the enormous microbial biodiversity which is present within these marine environments.

Open Data, Jupyter Notebooks and Geospatial Data Standards Combined - Opening up large volumes of marine and climate data to other communities

Science.gov (United States)

Clements, O.; Siemen, S.; Wagemann, J.

2017-12-01

The EU-funded Earthserver-2 project aims to offer on-demand access to large volumes of environmental data (Earth Observation, Marine, Climate data and Planetary data) via the interface standard Web Coverage Service defined by the Open Geospatial Consortium. Providing access to data via OGC web services (e.g. WCS and WMS) has the potential to open up services to a wider audience, especially to users outside the respective communities. Especially WCS 2.0 with its processing extension Web Coverage Processing Service (WCPS) is highly beneficial to make large volumes accessible to non-expert communities. Users do not have to deal with custom community data formats, such as GRIB for the meteorological community, but can directly access the data in a format they are more familiar with, such as NetCDF, JSON or CSV. Data requests can further directly be integrated into custom processing routines and users are not required to download Gigabytes of data anymore. WCS supports trim (reduction of data extent) and slice (reduction of data dimension) operations on multi-dimensional data, providing users a very flexible on-demand access to the data. WCPS allows the user to craft queries to run on the data using a text-based query language, similar to SQL. These queries can be very powerful, e.g. condensing a three-dimensional data cube into its two-dimensional mean. However, the more processing-intensive the more complex the query. As part of the EarthServer-2 project, we developed a python library that helps users to generate complex WCPS queries with Python, a programming language they are more familiar with. The interactive presentation aims to give practical examples how users can benefit from two specific WCS services from the Marine and Climate community. Use-cases from the two communities will show different approaches to take advantage of a Web Coverage (Processing) Service. The entire content is available with Jupyter Notebooks, as they prove to be a highly beneficial tool

The bacterial community structure of hydrocarbon-polluted marine environments as the basis for the definition of an ecological index of hydrocarbon exposure.

Science.gov (United States)

Lozada, Mariana; Marcos, Magalí S; Commendatore, Marta G; Gil, Mónica N; Dionisi, Hebe M

2014-09-17

The aim of this study was to design a molecular biological tool, using information provided by amplicon pyrosequencing of 16S rRNA genes, that could be suitable for environmental assessment and bioremediation in marine ecosystems. We selected 63 bacterial genera that were previously linked to hydrocarbon biodegradation, representing a minimum sample of the bacterial guild associated with this process. We defined an ecological indicator (ecological index of hydrocarbon exposure, EIHE) using the relative abundance values of these genera obtained by pyrotag analysis. This index reflects the proportion of the bacterial community that is potentially capable of biodegrading hydrocarbons. When the bacterial community structures of intertidal sediments from two sites with different pollution histories were analyzed, 16 of the selected genera (25%) were significantly overrepresented with respect to the pristine site, in at least one of the samples from the polluted site. Although the relative abundances of individual genera associated with hydrocarbon biodegradation were generally low in samples from the polluted site, EIHE values were 4 times higher than those in the pristine sample, with at least 5% of the bacterial community in the sediments being represented by the selected genera. EIHE values were also calculated in other oil-exposed marine sediments as well as in seawater using public datasets from experimental systems and field studies. In all cases, the EIHE was significantly higher in oiled than in unpolluted samples, suggesting that this tool could be used as an estimator of the hydrocarbon-degrading potential of microbial communities.

Chemicals to enhance microalgal growth and accumulation of high-value bioproducts

Directory of Open Access Journals (Sweden)

Xinheng eYu

2015-02-01

Full Text Available Photosynthetic microalgae have attracted significant attention as they can serve as important sources for cosmetic, food and pharmaceutical products, industrial materials and even biofuel biodiesels. However, current productivity of microalga-based processes is still very low, which has restricted their scale-up application. In addition to various efforts in strain improvement and cultivation optimization, it was proposed that the productivity of microalga-based processes can also be increased using various chemicals to trigger or enhance cell growth and accumulation of bioproducts. Herein, we summarized recent progresses in applying chemical triggers or enhancers to improve cell growth and accumulation of bioproducts in algal cultures. Based on their enhancing mechanisms, these chemicals can be classified into four categories：chemicals regulating biosynthetic pathways, chemicals inducing oxidative stress responses, phytohormones and analogues regulating multiple aspects of microalgal metabolism, and chemicals directly as metabolic precursors. Taken together, the early researches demonstrated that the use of chemical stimulants could be a very effective and economical way to improve cell growth and accumulation of high-value bioproducts in large-scale cultivation of microalgae.

Marine disease impacts, diagnosis, forecasting, management and policy

Science.gov (United States)

Lafferty, Kevin D.; Hofmann, Eileen E.

2016-01-01

As Australians were spending millions of dollars in 2014 to remove the coral-eating crown of thorns sea star from the Great Barrier Reef, sea stars started washing up dead for free along North America's Pacific Coast. Because North American sea stars are important and iconic predators in marine communities, locals and marine scientists alike were alarmed by what proved to be the world's most widespread marine mass mortality in geographical extent and species affected, especially given its mysterious cause. Investigative research using modern diagnostic techniques implicated a never-before-seen virus [1]. The virus inspired international attention to marine diseases, including this theme issue.

MESA: Supporting Teaching and Learning about the Marine Environment--Primary Science Focus

Science.gov (United States)

Preston, Christine

2010-01-01

The Marine Education Society of Australasia (MESA) Inc. is a national organisation of marine educators that aims to bring together people interested in the study and enjoyment of coastal and marine environments. MESA representatives and members organise education and interpretation activities in support of schools and communities during a number…

Latitudinal gradients in degradation of marine dissolved organic carbon.

Directory of Open Access Journals (Sweden)

Carol Arnosti

Full Text Available Heterotrophic microbial communities cycle nearly half of net primary productivity in the ocean, and play a particularly important role in transformations of dissolved organic carbon (DOC. The specific means by which these communities mediate the transformations of organic carbon are largely unknown, since the vast majority of marine bacteria have not been isolated in culture, and most measurements of DOC degradation rates have focused on uptake and metabolism of either bulk DOC or of simple model compounds (e.g. specific amino acids or sugars. Genomic investigations provide information about the potential capabilities of organisms and communities but not the extent to which such potential is expressed. We tested directly the capabilities of heterotrophic microbial communities in surface ocean waters at 32 stations spanning latitudes from 76°S to 79°N to hydrolyze a range of high molecular weight organic substrates and thereby initiate organic matter degradation. These data demonstrate the existence of a latitudinal gradient in the range of complex substrates available to heterotrophic microbial communities, paralleling the global gradient in bacterial species richness. As changing climate increasingly affects the marine environment, changes in the spectrum of substrates accessible by microbial communities may lead to shifts in the location and rate at which marine DOC is respired. Since the inventory of DOC in the ocean is comparable in magnitude to the atmospheric CO(2 reservoir, such a change could profoundly affect the global carbon cycle.

Microbial Surface Colonization and Biofilm Development in Marine Environments

Science.gov (United States)

2015-01-01

SUMMARY Biotic and abiotic surfaces in marine waters are rapidly colonized by microorganisms. Surface colonization and subsequent biofilm formation and development provide numerous advantages to these organisms and support critical ecological and biogeochemical functions in the changing marine environment. Microbial surface association also contributes to deleterious effects such as biofouling, biocorrosion, and the persistence and transmission of harmful or pathogenic microorganisms and their genetic determinants. The processes and mechanisms of colonization as well as key players among the surface-associated microbiota have been studied for several decades. Accumulating evidence indicates that specific cell-surface, cell-cell, and interpopulation interactions shape the composition, structure, spatiotemporal dynamics, and functions of surface-associated microbial communities. Several key microbial processes and mechanisms, including (i) surface, population, and community sensing and signaling, (ii) intraspecies and interspecies communication and interaction, and (iii) the regulatory balance between cooperation and competition, have been identified as critical for the microbial surface association lifestyle. In this review, recent progress in the study of marine microbial surface colonization and biofilm development is synthesized and discussed. Major gaps in our knowledge remain. We pose questions for targeted investigation of surface-specific community-level microbial features, answers to which would advance our understanding of surface-associated microbial community ecology and the biogeochemical functions of these communities at levels from molecular mechanistic details through systems biological integration. PMID:26700108

Construction and screening of marine metagenomic libraries.

Science.gov (United States)

Weiland, Nancy; Löscher, Carolin; Metzger, Rebekka; Schmitz, Ruth

2010-01-01

Marine microbial communities are highly diverse and have evolved during extended evolutionary processes of physiological adaptations under the influence of a variety of ecological conditions and selection pressures. They harbor an enormous diversity of microbes with still unknown and probably new physiological characteristics. Besides, the surfaces of marine multicellular organisms are typically covered by a consortium of epibiotic bacteria and act as barriers, where diverse interactions between microorganisms and hosts take place. Thus, microbial diversity in the water column of the oceans and the microbial consortia on marine tissues of multicellular organisms are rich sources for isolating novel bioactive compounds and genes. Here we describe the sampling, construction of large-insert metagenomic libraries from marine habitats and exemplarily one function based screen of metagenomic clones.

Effects of different levels of UV-B radiation on marine epilithic communities: a short-term microcosm study

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R. A. Danilov

2000-12-01

Full Text Available Epilithic communities from brackish coastal water of the east coast of Sweden were studied in order to reveal their responses to different levels of UV-B radiation. The experiment was conducted for seven days in an indoor microcosm system. The epilithic communities were exposed daily to different doses of UV-B radiation: 1, 3, 5 and 7 hours, respectively. The intensity of the UV-B radiation used was similar to that in natural environments. After seven days clear shifts both in species composition and community structure were observed. All species of diatoms showed negative correlation with enhanced levels of UV-B. On the other hand, abundance of cyanobacteria was positively correlated with enhanced levels of UV-B (Calothrix aeruginea, R=0.49;Oscillatoria amphibia, R=0.93; Pseudanabaena mucicola, R=0.26. Communities dominated by diatoms and green algae at the initial stage of the experiment did show a drastic decrease in diatom abundance under UV-B stress and finally became dominated by cyanobacteria. Among green algae the abundance of Cladophora sericea correlated positively (R=0.33 with enhanced exposure to UV-B, while Monoraphidium-species exhibited negative correlation to UV-B. Otherwise, no significant correlation between other green algae species identified and UV-B stress could be detected. We conclude that UV-B radiation, even at lower levels, is capable to induce severe changes to marine epilithic communities. The trends revealed in the present study predict a shift from communities dominated by diatoms and green algae to those dominated by cyanobacteria.

Ocean acidification of a coastal Antarctic marine microbial community reveals a critical threshold for CO2 tolerance in phytoplankton productivity

Science.gov (United States)

Deppeler, Stacy; Petrou, Katherina; Schulz, Kai G.; Westwood, Karen; Pearce, Imojen; McKinlay, John; Davidson, Andrew

2018-01-01

High-latitude oceans are anticipated to be some of the first regions affected by ocean acidification. Despite this, the effect of ocean acidification on natural communities of Antarctic marine microbes is still not well understood. In this study we exposed an early spring, coastal marine microbial community in Prydz Bay to CO2 levels ranging from ambient (343 µatm) to 1641 µatm in six 650 L minicosms. Productivity assays were performed to identify whether a CO2 threshold existed that led to a change in primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) in the minicosms. In addition, photophysiological measurements were performed to identify possible mechanisms driving changes in the phytoplankton community. A critical threshold for tolerance to ocean acidification was identified in the phytoplankton community between 953 and 1140 µatm. CO2 levels ≥ 1140 µatm negatively affected photosynthetic performance and Chl a-normalised primary productivity (csGPP14C), causing significant reductions in gross primary production (GPP14C), Chl a accumulation, nutrient uptake, and POM production. However, there was no effect of CO2 on C : N ratios. Over time, the phytoplankton community acclimated to high CO2 conditions, showing a down-regulation of carbon concentrating mechanisms (CCMs) and likely adjusting other intracellular processes. Bacterial abundance initially increased in CO2 treatments ≥ 953 µatm (days 3-5), yet gross bacterial production (GBP14C) remained unchanged and cell-specific bacterial productivity (csBP14C) was reduced. Towards the end of the experiment, GBP14C and csBP14C markedly increased across all treatments regardless of CO2 availability. This coincided with increased organic matter availability (POC and PON) combined with improved efficiency of carbon uptake. Changes in phytoplankton community production could have negative effects on the Antarctic food web and the

Ocean acidification of a coastal Antarctic marine microbial community reveals a critical threshold for CO2 tolerance in phytoplankton productivity

Directory of Open Access Journals (Sweden)

S. Deppeler

2018-01-01

Full Text Available High-latitude oceans are anticipated to be some of the first regions affected by ocean acidification. Despite this, the effect of ocean acidification on natural communities of Antarctic marine microbes is still not well understood. In this study we exposed an early spring, coastal marine microbial community in Prydz Bay to CO2 levels ranging from ambient (343 µatm to 1641 µatm in six 650 L minicosms. Productivity assays were performed to identify whether a CO2 threshold existed that led to a change in primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a and particulate organic matter (POM in the minicosms. In addition, photophysiological measurements were performed to identify possible mechanisms driving changes in the phytoplankton community. A critical threshold for tolerance to ocean acidification was identified in the phytoplankton community between 953 and 1140 µatm. CO2 levels  ≥ 1140 µatm negatively affected photosynthetic performance and Chl a-normalised primary productivity (csGPP14C, causing significant reductions in gross primary production (GPP14C, Chl a accumulation, nutrient uptake, and POM production. However, there was no effect of CO2 on C : N ratios. Over time, the phytoplankton community acclimated to high CO2 conditions, showing a down-regulation of carbon concentrating mechanisms (CCMs and likely adjusting other intracellular processes. Bacterial abundance initially increased in CO2 treatments  ≥ 953 µatm (days 3–5, yet gross bacterial production (GBP14C remained unchanged and cell-specific bacterial productivity (csBP14C was reduced. Towards the end of the experiment, GBP14C and csBP14C markedly increased across all treatments regardless of CO2 availability. This coincided with increased organic matter availability (POC and PON combined with improved efficiency of carbon uptake. Changes in phytoplankton community production could have negative

Regime shifts in demersal assemblages of the Benguela Current Large Marine Ecosystem: a comparative assessment

DEFF Research Database (Denmark)

Kirkman, Stephen P.; Yemane, Dawit; Atkinson, Lara J.

2015-01-01

Using long‐term survey data, changes in demersal faunal communities in the Benguela Current Large Marine Ecosystem were analysed at community and population levels to provide a comparative overview of the occurrence and timing of regime shifts. For South Africa, the timing of a community‐level sh......Using long‐term survey data, changes in demersal faunal communities in the Benguela Current Large Marine Ecosystem were analysed at community and population levels to provide a comparative overview of the occurrence and timing of regime shifts. For South Africa, the timing of a community...

Secondary production in shallow marine environments

International Nuclear Information System (INIS)

Pomeroy, L.R.

1976-01-01

Recommendations are discussed with regard to population ecology, microbial food webs, marine ecosystems, improved instrumentation, and effects of land and sea on shallow marine systems. The control of secondary production is discussed with regard to present status of knowledge; research needs for studies on dominant secondary producers, food webs that lead to commercial species, and significant features of the trophic structure of shallow water marine communities. Secondary production at the land-water interface is discussed with regard to present status of knowledge; importance of macrophytes to secondary production; export to secondary consumers; utilization of macrophyte primary production; and correlations between secondary production and river discharge. The role of microorganisms in secondary production is also discussed

Effectiveness of marine protected areas in managing the drivers of ecosystem change: a case of Mnazi Bay Marine Park, Tanzania.

Science.gov (United States)

Machumu, Milali Ernest; Yakupitiyage, Amararatne

2013-04-01

Marine protected areas (MPAs) are being promoted in Tanzania to mitigate the drivers of ecosystem change such as overfishing and other anthropogenic impacts on marine resources. The effectiveness of MPAs in managing those drivers was assessed in three ecological zones, seafront, mangrove, and riverine of Mnazi Bay Marine Park, using Participatory Community Analysis techniques, questionnaire survey, checklist and fishery resource assessment methods. Eleven major drivers of ecosystem change were identified. Resource dependence had a major effect in all ecological zones of the park. The results indicated that the park's legislations/regulations, management procedures, and conservation efforts are reasonably effective in managing its resources. The positive signs accrued from conservation efforts have been realized by the communities in terms of increased catch/income, awareness and compliance. However, some natural and anthropogenic drivers continued to threaten the park's sustainability. Furthermore, implementation of resource use and benefit sharing mechanisms still remained a considerable challenge to be addressed.

Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities

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Williamson, David H; Ceccarelli, Daniela M; Evans, Richard D; Jones, Geoffrey P; Russ, Garry R

2014-01-01

Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish populations. Numerous studies have documented positive ecological and socio-economic benefits of NTRs; however, the ability of NTRs to ameliorate the effects of acute disturbances on coral reefs has seldom been investigated. Here, we test these factors by tracking the dynamics of benthic and fish communities, including the important fishery species, coral trout (Plectropomus spp.), over 8 years in both NTRs and fished areas in the Keppel Island group, Great Barrier Reef, Australia. Two major disturbances impacted the reefs during the monitoring period, a coral bleaching event in 2006 and a freshwater flood plume in 2011. Both disturbances generated significant declines in coral cover and habitat complexity, with subsequent declines in fish abundance and diversity, and pronounced shifts in fish assemblage structure. Coral trout density also declined in response to the loss of live coral, however, the approximately 2:1 density ratio between NTRs and fished zones was maintained over time. The only post-disturbance refuges for coral trout spawning stocks were within the NTRs that escaped the worst effects of the disturbances. Although NTRs had little discernible effect on the temporal dynamics of benthic or fish communities, it was evident that the post-disturbance refuges for coral trout spawning stocks within some NTRs may be critically important to regional-scale population persistence and recovery. PMID:24634720

Sustainability of marine artisanal fishing as a livelihood and the ...

African Journals Online (AJOL)

The study aims to assess the livelihoods activities of marine fisher folks and their activities on the environment. Ten marine fishing communities in Lagos State were selected using two stage stratified sampling system. Data were collected from 60 households (50 male headed and 10 female headed households).

Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing.

Science.gov (United States)

Hong, Pei-Ying; Wheeler, Emily; Cann, Isaac K O; Mackie, Roderick I

2011-09-01

Herbivorous reptiles depend on complex gut microbial communities to effectively degrade dietary polysaccharides. The composition of these fermentative communities may vary based on dietary differences. To explore the role of diet in shaping gut microbial communities, we evaluated the fecal samples from two related host species--the algae-consuming marine iguana (Amblyrhynchus cristatus) and land iguanas (LI) (genus Conolophus) that consume terrestrial vegetation. Marine and LI fecal samples were collected from different islands in the Galápagos archipelago. High-throughput 16S rRNA-based pyrosequencing was used to provide a comparative analysis of fecal microbial diversity. At the phylum level, the fecal microbial community in iguanas was predominated by Firmicutes (69.5±7.9%) and Bacteroidetes (6.2±2.8%), as well as unclassified Bacteria (20.6±8.6%), suggesting that a large portion of iguana fecal microbiota is novel and could be involved in currently unknown functions. Host species differed in the abundance of specific bacterial groups. Bacteroides spp., Lachnospiraceae and Clostridiaceae were significantly more abundant in the marine iguanas (MI) (P-value>1E-9). In contrast, Ruminococcaceae were present at >5-fold higher abundance in the LI than MI (P-value>6E-14). Archaea were only detected in the LI. The number of operational taxonomic units (OTUs) in the LI (356-896 OTUs) was >2-fold higher than in the MI (112-567 OTUs), and this increase in OTU diversity could be related to the complexity of the resident bacterial population and their gene repertoire required to breakdown the recalcitrant polysaccharides prevalent in terrestrial plants. Our findings suggest that dietary differences contribute to gut microbial community differentiation in herbivorous lizards. Most importantly, this study provides a better understanding of the microbial diversity in the iguana gut; therefore facilitating future efforts to discover novel bacterial-associated enzymes that

Enriching distinctive microbial communities from marine sediments via an electrochemical-sulfide-oxidizing process on carbon electrodes

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Shiue-Lin eLi

2015-02-01

Full Text Available Sulfide is a common product of marine anaerobic respiration, and a potent reactant biologically and geochemically. Here we demonstrate the impact on microbial communities with the removal of sulfide via electrochemical methods. The use of differential pulse voltammetry revealed that the oxidation of soluble sulfide was seen at + mV (vs. SHE at all pH ranges tested (from pH = 4 to 8, while non-ionized sulfide, which dominated at pH = 4 was poorly oxidized via this process. Two mixed cultures (CAT and LA were enriched from two different marine sediments (from Catalina Island, CAT; from the Port of Los Angeles, LA in serum bottles using a seawater medium supplemented with lactate, sulfate, and yeast extract, to obtain abundant biomass. Both CAT and LA cultures were inoculated in electrochemical cells (using yeast-extract-free seawater medium as an electrolyte equipped with carbon-felt electrodes. In both cases, when potentials of +630 or 130 mV (vs. SHE were applied, currents were consistently higher at +630 then at 0 mV, indicating more sulfide being oxidized at the higher potential. In addition, higher organic-acid and sulfate conversion rates were found at +630 mV with CAT, while no significant differences were found with LA at different potentials. The results of microbial-community analyses revealed a decrease in diversity for both CAT and LA after electrochemical incubation. In addition, some bacteria (e.g., Clostridium and Arcobacter not well known to be capable of extracellular electron transfer, were found to be dominant in the electrochemical cells. Thus, even though the different mixed cultures have different tolerances for sulfide, electrochemical-sulfide removal can lead to major population changes.

Distribution and abundance of phytobenthic communities: Implications for connectivity and ecosystem functioning in a Black Sea Marine Protected Area

Science.gov (United States)

Berov, Dimitar; Todorova, Valentina; Dimitrov, Lubomir; Rinde, Eli; Karamfilov, Ventzislav

2018-01-01

The distribution and abundance of macroalgal communities in a Marine Protected Area (MPA) along the Bulgarian Black Sea coast were mapped and quantified, with particular focus on the previously unstudied P. crispa lower-infralittoral communities on Ostrea edulis biogenic reefs. Data from high resolution geophysical substrate mapping were combined with benthic community observations from georeferenced benthic photographic surveys and sampling. Multivariate analysis identified four distinct assemblages of lower-infralittoral macroalgal communities at depths between 10 and 17 m, dominated by Phyllophora crispa, Apoglossum ruscifoluim, Zanardinia typus and Gelidium spp. Maxent software analysis showed distinct preferences of the identified communities to areas with specific ranges of depth, inclination and curvature, with P. crispa more frequently occurring on vertical oyster biogenic reef structures. By combining production rates from literature, biomass measurements and the produced habitat maps, the highest proportion of primary production and DOC release was shown for the upper infralittoral Cystoseira barbata and Cystoseira bosphorica, followed by the production of the lower-infralittoral macroalgae. The observed distribution of P. crispa within the studied MPA was related to the network of Natura 2000 maritime MPAs along the Bulgarian Black Sea coast, which indicated that the connectivity of the populations of the species within the established network is insufficient within this cell of ecosystem functioning.

The marine cytotoxin portimine is a potent and selective inducer of apoptosis.

Science.gov (United States)

Cuddihy, Sarah L; Drake, Sarah; Harwood, D Tim; Selwood, Andrew I; McNabb, Paul S; Hampton, Mark B

2016-12-01

Portimine is a recently discovered member of a class of marine micro-algal toxins called cyclic imines. In dramatic contrast to related compounds in this toxin class, portimine has very low acute toxicity to mice but is highly cytotoxic to cultured cells. In this study we show that portimine kills human Jurkat T-lymphoma cells and mouse embryonic fibroblasts (MEFs), with LC 50 values of 6 and 2.5 nM respectively. Treated cells displayed rapid caspase activation and phosphatidylserine exposure, indicative of apoptotic cell death. Jurkat cells overexpressing the anti-apoptotic protein Bcl-2 or Bax/Bak knockout MEFs were completely protected from portimine. This protection was apparent even at high concentrations of portimine, with no evidence of necrotic cell death, indicating that portimine is a selective chemical inducer of apoptosis. Treatment of the Bcl-2-overexpressing cells with both portimine and the Bcl-2 inhibitor ABT-737 proved a powerful combination, causing >90 % death. We conclude that portimine is one of the most potent naturally derived inducers of apoptosis to be discovered, and it displays strong selectivity for the induction of apoptotic pathways.

Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

Directory of Open Access Journals (Sweden)

Amy Apprill

Full Text Available Microbes are now well regarded for their important role in mammalian health. The microbiology of skin--a unique interface between the host and environment--is a major research focus in human health and skin disorders, but is less explored in other mammals. Here, we report on a cross-population study of the skin-associated bacterial community of humpback whales (Megaptera novaeangliae, and examine the potential for a core bacterial community and its variability with host (endogenous or geographic/environmental (exogenous specific factors. Skin biopsies or freshly sloughed skin from 56 individuals were sampled from populations in the North Atlantic, North Pacific and South Pacific oceans and bacteria were characterized using 454 pyrosequencing of SSU rRNA genes. Phylogenetic and statistical analyses revealed the ubiquity and abundance of bacteria belonging to the Flavobacteria genus Tenacibaculum and the Gammaproteobacteria genus Psychrobacter across the whale populations. Scanning electron microscopy of skin indicated that microbial cells colonize the skin surface. Despite the ubiquity of Tenacibaculum and Psychrobater spp., the relative composition of the skin-bacterial community differed significantly by geographic area as well as metabolic state of the animals (feeding versus starving during migration and breeding, suggesting that both exogenous and endogenous factors may play a role in influencing the skin-bacteria. Further, characteristics of the skin bacterial community from these free-swimming individuals were assembled and compared to two entangled and three dead individuals, revealing a decrease in the central or core bacterial community members (Tenacibaculum and Psychrobater spp., as well as the emergence of potential pathogens in the latter cases. This is the first discovery of a cross-population, shared skin bacterial community. This research suggests that the skin bacteria may be connected to humpback health and immunity and could

Phytoplankton Biogeography and Community Stability in the Ocean

Science.gov (United States)

Cermeño, Pedro; de Vargas, Colomban; Abrantes, Fátima; Falkowski, Paul G.

2010-01-01

Background Despite enormous environmental variability linked to glacial/interglacial climates of the Pleistocene, we have recently shown that marine diatom communities evolved slowly through gradual changes over the past 1.5 million years. Identifying the causes of this ecological stability is key for understanding the mechanisms that control the tempo and mode of community evolution. Methodology/Principal Findings If community assembly were controlled by local environmental selection rather than dispersal, environmental perturbations would change community composition, yet, this could revert once environmental conditions returned to previous-like states. We analyzed phytoplankton community composition across >104 km latitudinal transects in the Atlantic Ocean and show that local environmental selection of broadly dispersed species primarily controls community structure. Consistent with these results, three independent fossil records of marine diatoms over the past 250,000 years show cycles of community departure and recovery tightly synchronized with the temporal variations in Earth's climate. Conclusions/Significance Changes in habitat conditions dramatically alter community structure, yet, we conclude that the high dispersal of marine planktonic microbes erases the legacy of past environmental conditions, thereby decreasing the tempo of community evolution. PMID:20368810

Deep-Subsurface Marine Methane Hydrate Microbial Communities: Who's There and What Are They Doing?

Science.gov (United States)

Colwell, F.; Reed, D.; Fujita, Y.; Delwiche, M.; Blackwelder, D.; Uchida, T.; Fujii, T.; Lu, H.

2001-12-01

Natural gas hydrates are crystalline deposits of freshwater and primarily methane. They are estimated to represent a potentially vast reservoir of energy. Relatively little is known regarding microbial communities surrounding deep [>100 meters below sea floor (mbsf)] hydrate-bearing sediments. Deep sediment cores were collected in zones above, within, and below the hydrate bearing strata in an accretionary prism off the coast of Japan. Microorganisms were characterized using cultivation- and non-cultivation-based microbiological techniques to better understand the role that they play in the production and distribution of methane in gas hydrates. Direct counts show cell density at 105 cells/g throughout the hydrate strata. Lipid and 16S rDNA analyses indicate that diverse bacterial and archaeal microorganisms are represented throughout the strata. Acetate and hydrogen were utilized as an energy source for methane-producing microorganisms from each sediment depth. Although the methanogenic biomarker coenzyme M was not present above the detection limit in any of the samples, cloning and characterization of amplified 16S ribosomal RNA genes indicated the presence of methanogenic microorganisms related to the Methanobacteriales and Methanococcales. In addition, archaeal clones closely related to the hyperthermophilic Pyrodictiales were detected. Analysis of eubacterial clones indicated a more diverse eubacterial community compared to the archaea, including members from the groups of cyanobacteria, proteobacteria, gram positive bacteria, and flexibacter-cytophaga-bacteriodes. This study suggests that the diversity of microbial communities associated with the presence of methane in gas hydrate-rich deep marine sediments is greater than previously estimated.

Construction and Screening of Marine Metagenomic Large Insert Libraries.

Science.gov (United States)

Weiland-Bräuer, Nancy; Langfeldt, Daniela; Schmitz, Ruth A

2017-01-01

The marine environment covers more than 70 % of the world's surface. Marine microbial communities are highly diverse and have evolved during extended evolutionary processes of physiological adaptations under the influence of a variety of ecological conditions and selection pressures. They harbor an enormous diversity of microbes with still unknown and probably new physiological characteristics. In the past, marine microbes, mostly bacteria of microbial consortia attached to marine tissues of multicellular organisms, have proven to be a rich source of highly potent bioactive compounds, which represent a considerable number of drug candidates. However, to date, the biodiversity of marine microbes and the versatility of their bioactive compounds and metabolites have not been fully explored. This chapter describes sampling in the marine environment, construction of metagenomic large insert libraries from marine habitats, and exemplarily one function based screen of metagenomic clones for identification of quorum quenching activities.

Impact of Anthracene Exposure on Bacterial Community Composition and Function in an Egyptian Marine Environment

International Nuclear Information System (INIS)

Zakaria, A.E.M.; Lappin-Scott, H.

2013-01-01

The application of bioremediation technology for pollution treatment requires more knowledge about how do microbial communities respond to pollutant exposure. The main goals of this study are to investigate the behavior of natural bacterial microflora of Suez Gulf (SGM) in response to exposure to different concentrations of Polycyclic Aromatic Hydrocarbons (PAHs) for different periods. In this study, anthracene, as a model of (PAHs) was added in different concentrations, (30,150 and 500 ppm) to fertilized Suez Gulf water in shaking microcosms to examine the possible shifts in bacterial community composition and function. Changes in bacterial community composition was followed up after different periods of exposure (0, 6, 12, and 18) days to the above mentioned concentrations of anthracene by profiling the amplified product of 16S rDNA via denaturing gradient gel electrophoresis (DGGE) of SGM in treated microcosm separately. DGGE profiles revealed remarkable changes in diversity due to exposure concentration and duration to anthracene. A diverse relationship between anthracene concentration and bacterial diversity was detected. On the other hand, changes in community function were determined by testing the biodegradation capabilities of the consortia after different exposures separately in microcosms containing 50 ppm of anthracene for 14 days. The remaining anthracene was extracted and monitored by high performance liquid chromatography (HPLC) and DGGE profiles of amplified 16S rDNA extracted from parallel biodegradation microcosms were examined to indicate the effects of pre-exposure to different concentrations for different periods to PAHs on the bacterial community compositions. The results confirm that the long term effects of pre exposure to high concentrations of PAH on the bacterial community composition, suggesting that that some organisms can be used as a bio marker indicating the exposures of the marine environment to high concentrations of PAHs. HPLC

Community change within a Caribbean coral reef Marine Protected Area following two decades of local management.

Directory of Open Access Journals (Sweden)

Mae M Noble

Full Text Available Structural change in both the habitat and reef-associated fish assemblages within spatially managed coral reefs can provide key insights into the benefits and limitations of Marine Protected Areas (MPAs. While MPA zoning effects on particular target species are well reported, we are yet to fully resolve the various affects of spatial management on the structure of coral reef communities over decadal time scales. Here, we document mixed affects of MPA zoning on fish density, biomass and species richness over the 21 years since establishment of the Saba Marine Park (SMP. Although we found significantly greater biomass and species richness of reef-associated fishes within shallow habitats (5 meters depth closed to fishing, this did not hold for deeper (15 m habitats, and there was a widespread decline (38% decrease in live hard coral cover and a 68% loss of carnivorous reef fishes across all zones of the SMP from the 1990s to 2008. Given the importance of live coral for the maintenance and replenishment of reef fishes, and the likely role of chronic disturbance in driving coral decline across the region, we explore how local spatial management can help protect coral reef ecosystems within the context of large-scale environmental pressures and disturbances outside the purview of local MPA management.

A cost analysis of microalgal biomass and biodiesel production in open raceways treating municipal wastewater and under optimum light wavelength.

Science.gov (United States)

Kang, Zion; Kim, Byung-Hyuk; Ramanan, Rishiram; Choi, Jong-Eun; Yang, Ji-Won; Oh, Hee-Mock; Kim, Hee-Sik

2015-01-01

Open raceway ponds are cost-efficient for mass cultivation of microalgae compared with photobioreactors. Although low-cost options like wastewater as nutrient source is studied to overcome the commercialization threshold for biodiesel production from microalgae, a cost analysis on the use of wastewater and other incremental increases in productivity has not been elucidated. We determined the effect of using wastewater and wavelength filters on microalgal productivity. Experimental results were then fitted into a model, and cost analysis was performed in comparison with control raceways. Three different microalgal strains, Chlorella vulgaris AG10032, Chlorella sp. JK2, and Scenedesmus sp. JK10, were tested for nutrient removal under different light wavelengths (blue, green, red, and white) using filters in batch cultivation. Blue wavelength showed an average of 27% higher nutrient removal and at least 42% higher chemical oxygen demand removal compared with white light. Naturally, the specific growth rate of microalgae cultivated under blue wavelength was on average 10.8% higher than white wavelength. Similarly, lipid productivity was highest in blue wavelength, at least 46.8% higher than white wavelength, whereas FAME composition revealed a mild increase in oleic and palmitic acid levels. Cost analysis reveals that raceways treating wastewater and using monochromatic wavelength would decrease costs from 2.71 to 0.73 $/kg biomass. We prove that increasing both biomass and lipid productivity is possible through cost-effective approaches, thereby accelerating the commercialization of low-value products from microalgae, like biodiesel.

Projected impacts of climate change on marine fish and fisheries

DEFF Research Database (Denmark)

Hollowed, Anne B.; Barange, Manuel; Beamish, Richard J.

2013-01-01

This paper reviews current literature on the projected effects of climate change on marine fish and shellfish, their fisheries, and fishery-dependent communities throughout the northern hemisphere. The review addresses the following issues: (i) expected impacts on ecosystem productivity and habitat......) implications for food security and associated changes; and (v) uncertainty and modelling skill assessment. Climate change will impact fish and shellfish, their fisheries, and fishery-dependent communities through a complex suite of linked processes. Integrated interdisciplinary research teams are forming...... in many regions to project these complex responses. National and international marine research organizations serve a key role in the coordination and integration of research to accelerate the production of projections of the effects of climate change on marine ecosystems and to move towards a future where...

ZOOPLANKTON COMMUNITY STRUCTURE OF THE SEA SURFACE MICROLAYER NEAR NUCLEAR POWER PLANTS AND MARINE FISH CULTURE ZONES IN DAYA BAY

Institute of Scientific and Technical Information of China (English)

杨宇峰; 王肇鼎; 潘明祥; 焦念志

2002-01-01

The authors' surveys in May-June 1999 (two cruises) at six sampling stations near nuclear power plants (NPP) and marine fish culture zones in Daya Bay, Guangdong, revealed species composition, densities and body-size of thesea surface microlayer (SM) zooplankton (>35 μm). Results showed that protozoans and copepod nauplii were the predominant components, accounting for 65.40% to95.56% of total zooplankton in abundance. The size-frequency distributions showed that the frequency of micro-zooplankton (0.02-0.2 mm) reached 0.8235. The SM zooplankton community structure revealed in the present study was quite different from that revealed by investigations in the 1980s in Daya Bay. Difference of sampling method has important influence on the obtained zooplankton community structure. SM zooplankton consisted of micro- and mesozooplankton (0.2-2.0 mm), with micro-zooplankton being predominant. Some possible cause-effect relations between the zooplankton community structure and mariculture, nuclear power plants cooling systems and sampling method are discussed.``

Spatial and seasonal variation in diversity and structure of microbial biofilms on marine plastics in Northern European waters.

Science.gov (United States)

Oberbeckmann, Sonja; Loeder, Martin G J; Gerdts, Gunnar; Osborn, A Mark

2014-11-01

Plastic pollution is now recognised as a major threat to marine environments and marine biota. Recent research highlights that diverse microbial species are found to colonise plastic surfaces (the plastisphere) within marine waters. Here, we investigate how the structure and diversity of marine plastisphere microbial community vary with respect to season, location and plastic substrate type. We performed a 6-week exposure experiment with polyethylene terephthalate (PET) bottles in the North Sea (UK) as well as sea surface sampling of plastic polymers in Northern European waters. Scanning electron microscopy revealed diverse plastisphere communities comprising prokaryotic and eukaryotic microorganisms. Denaturing gradient gel electrophoresis (DGGE) and sequencing analysis revealed that plastisphere microbial communities on PET fragments varied both with season and location and comprised of bacteria belonging to Bacteroidetes, Proteobacteria, Cyanobacteria and members of the eukaryotes Bacillariophyceae and Phaeophyceae. Polymers sampled from the sea surface mainly comprised polyethylene, polystyrene and polypropylene particles. Variation within plastisphere communities on different polymer types was observed, but communities were primarily dominated by Cyanobacteria. This research reveals that the composition of plastisphere microbial communities in marine waters varies with season, geographical location and plastic substrate type. © 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

A comparison of community and trophic structure in five marine ecosystems based on energy budgets and system metrics

Science.gov (United States)

Gaichas, Sarah; Skaret, Georg; Falk-Petersen, Jannike; Link, Jason S.; Overholtz, William; Megrey, Bernard A.; Gjøsæter, Harald; Stockhausen, William T.; Dommasnes, Are; Friedland, Kevin D.; Aydin, Kerim

2009-04-01

Energy budget models for five marine ecosystems were compared to identify differences and similarities in trophic and community structure. We examined the Gulf of Maine and Georges Bank in the northwest Atlantic Ocean, the combined Norwegian/Barents Seas in the northeast Atlantic Ocean, and the eastern Bering Sea and the Gulf of Alaska in the northeast Pacific Ocean. Comparable energy budgets were constructed for each ecosystem by aggregating information for similar species groups into consistent functional groups. Several ecosystem indices (e.g., functional group production, consumption and biomass ratios, cumulative biomass, food web macrodescriptors, and network metrics) were compared for each ecosystem. The comparative approach clearly identified data gaps for each ecosystem, an important outcome of this work. Commonalities across the ecosystems included overall high primary production and energy flow at low trophic levels, high production and consumption by carnivorous zooplankton, and similar proportions of apex predator to lower trophic level biomass. Major differences included distinct biomass ratios of pelagic to demersal fish, ranging from highest in the combined Norwegian/Barents ecosystem to lowest in the Alaskan systems, and notable differences in primary production per unit area, highest in the Alaskan and Georges Bank/Gulf of Maine ecosystems, and lowest in the Norwegian ecosystems. While comparing a disparate group of organisms across a wide range of marine ecosystems is challenging, this work demonstrates that standardized metrics both elucidate properties common to marine ecosystems and identify key distinctions useful for fisheries management.

Gendered Disparities in Quality of Cataract Surgery in a Marginalised Population in Pakistan: The Karachi Marine Fishing Communities Eye and General Health Survey.

Directory of Open Access Journals (Sweden)

Khabir Ahmad

Full Text Available Marine fishing communities are among the most marginalised and hard-to-reach groups and have been largely neglected in health research. We examined the quality of cataract surgery and its determinants, with an emphasis on gender, in marine fishing communities in Karachi, Pakistan, using multiple indicators of performance.The Karachi Marine Fishing Communities Eye and General Health Survey was a door-to-door, cross-sectional study conducted between March 2009 and April 2010 in fishing communities living on 7 islands and in coastal areas in Keamari, Karachi, located on the Arabian Sea. A population-based sample of 638 adults, aged ≥ 50 years, was studied. A total of 145 eyes (of 97 persons had undergone cataract surgery in this sample. Cataract surgical outcomes assessed included vision (presenting and best-corrected with a reduced logMAR chart, satisfaction with surgery, astigmatism, and pupil shape. Overall, 65.5% of the operated eyes had some form of visual loss (presenting visual acuity [PVA] < 6/12. 55.2%, 29.0%, and 15.9% of these had good, borderline, and poor visual outcomes based on presenting vision; with best correction, these values were: 68.3 %, 18.6%, and 13.1%, respectively. Of 7 covariates evaluated in the multivariable generalized estimating equations (GEE analyses, gender was the only significant independent predictor of visual outcome. Women's eyes were nearly 4.38 times more likely to have suboptimal visual outcome (PVA<6/18 compared with men's eyes (adjusted odds ratio 4.38, 95% CI 1.96-9.79; P<0.001 after adjusting for the effect of household financial status. A higher proportion of women's than men's eyes had an irregular pupil (26.5% vs. 14.8% or severe/very severe astigmatism (27.5% vs. 18.2%. However, these differences did not reach statistical significance. Overall, more than one fourth (44/144 of cataract surgeries resulted in dissatisfaction. The only significant predictor of satisfaction was visual outcome (P <0

Minimising losses to predation during microalgae cultivation.

Science.gov (United States)

Flynn, Kevin J; Kenny, Philip; Mitra, Aditee

2017-01-01

We explore approaches to minimise impacts of zooplanktonic pests upon commercial microalgal crops using system dynamics models to describe algal growth controlled by light and nutrient availability and zooplankton growth controlled by crop abundance and nutritional quality. Losses of microalgal crops are minimised when their growth is fastest and, in contrast, also when growing slowly under conditions of nutrient exhaustion. In many culture systems, however, dwindling light availability due to self-shading in dense suspensions favours slow growth under nutrient sufficiency. Such a situation improves microalgal quality as prey, enhancing zooplankton growth, and leads to rapid crop collapse. Timing of pest entry is important; crop losses are least likely in established, nutrient-exhausted microalgal communities grown for high C-content (e.g. for biofuels). A potentially useful approach is to promote a low level of P-stress that does not adversely affect microalgal growth but which produces a crop that is suboptimal for zooplankton growth.

Aspects regarding environmental impact of oil marine platforms from Black sea coast - Romanian area

International Nuclear Information System (INIS)

Szabo, N.

2005-01-01

Full text : As a result of investigations conducted by R.A.PETROM - PETROMAR Constanta subsidiary, reserves of oil and gas in geological structures LEBADA, EOCEN - LEBADA and SINOE from romanian sector of Black Sea Continental Platform, have been discovered. These reserves are exploited by marine platforms and ways of oil transportation to the shore are submarine pipe-lines and ships. To assess environmental impact of oil transportation, studies covered following steps; Characterization of the present status of environmental factors, in the range of pipe-lines and ships; Marine water characterization: salinity, ionic composition, dissolved gases, organic depositions on metallic bodies; Marine bicenosys: phytoplankton and zooplankton characteristics, phytobenthos and zoobenthos communities, marine ichtyofauna, marine mammals. Marine resources available for exploitation; Total radioactivity analysis results; Marine water hydrocarbons analysis results; Present pollution sources in the area; Air quality in oil marine platforms area and shore area; Potential pollution sources and pollutants resulted from oil products transport between marine platforms and shore; Sources and emissions in air; Sources and emissions in marine environment; Aspects regarding waste management; Environmental impact of oil products transport between marine platforms and shore; Impact on the air quality and marine environment of oil marine platforms activities; Assessment of environmental impact on atmosphere generated by the oil products transport between marine platforms and shore; Impact on the marine environment of oil transport ships; Effects of oil fractions on marine organisms; Acute effects of oil pollution on marine communities; Risks of causing major environmental impact accidents/failures on marine platforms PETROMAR; Chronic effects of low oil concentrations;Marine environment recovery potential after discharges accidents

A simple method for decomposition of peracetic acid in a microalgal cultivation system.

Science.gov (United States)

Sung, Min-Gyu; Lee, Hansol; Nam, Kibok; Rexroth, Sascha; Rögner, Matthias; Kwon, Jong-Hee; Yang, Ji-Won

2015-03-01

A cost-efficient process devoid of several washing steps was developed, which is related to direct cultivation following the decomposition of the sterilizer. Peracetic acid (PAA) is known to be an efficient antimicrobial agent due to its high oxidizing potential. Sterilization by 2 mM PAA demands at least 1 h incubation time for an effective disinfection. Direct degradation of PAA was demonstrated by utilizing components in conventional algal medium. Consequently, ferric ion and pH buffer (HEPES) showed a synergetic effect for the decomposition of PAA within 6 h. On the contrary, NaNO3, one of the main components in algal media, inhibits the decomposition of PAA. The improved growth of Chlorella vulgaris and Synechocystis PCC6803 was observed in the prepared BG11 by decomposition of PAA. This process involving sterilization and decomposition of PAA should help cost-efficient management of photobioreactors in a large scale for the production of value-added products and biofuels from microalgal biomass.

Effect of nitrogen regime on microalgal lipid production during mixotrophic growth with glycerol.

Science.gov (United States)

Paranjape, Kiran; Leite, Gustavo B; Hallenbeck, Patrick C

2016-08-01

Mixotrophic growth of microalgae to boost lipid production is currently under active investigation. Such a process could be of practical importance if a cheap source of organic carbon, such as waste glycerol from biodiesel production, could be used. Several previous studies have already demonstrated that this carbon source can be used by different indigenous strains of microalgae. In this study it is shown that different nitrogen limitation strategies can be applied to further increase lipid production during growth with glycerol. In one strategy, cultures were grown in nitrogen replete medium and then resuspended in nitrogen free medium. In a second strategy, cultures were grown with different initial concentrations of nitrate. Lipid production by the two microalgal strains used, Chlorella sorokiniana (PCH02) and Chlorella vulgaris (PCH05), was shown to be boosted by strategies of nitrogen limitation, but they responded differently to how nitrogen limitation was imposed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Anaerobic co-digestion of coffee husks and microalgal biomass after thermal hydrolysis.

Science.gov (United States)

Passos, Fabiana; Cordeiro, Paulo Henrique Miranda; Baeta, Bruno Eduardo Lobo; de Aquino, Sergio Francisco; Perez-Elvira, Sara Isabel

2018-04-01

Residual coffee husks after seed processing may be better profited if bioconverted into energy through anaerobic digestion. This process may be improved by implementing a pretreatment step and by co-digesting the coffee husks with a more liquid biomass. In this context, this study aimed at evaluating the anaerobic co-digestion of coffee husks with microalgal biomass. For this, both substrates were pretreated separately and in a mixture for attaining 15% of total solids (TS), which was demonstrated to be the minimum solid content for pretreatment of coffee husks. The results showed that the anaerobic co-digestion presented a synergistic effect, leading to 17% higher methane yield compared to the theoretical value of both substrates biodegraded separately. Furthermore, thermal hydrolysis pretreatment increased coffee husks anaerobic biodegradability. For co-digestion trials, the highest values were reached for pretreatment at 120 °C for 60 min, which led to 196 mLCH 4 /gVS and maximum methane production rate of 0.38 d -1 . Copyright © 2017 Elsevier Ltd. All rights reserved.

Microalgal bioengineering for sustainable energy development: Recent transgenesis and metabolic engineering strategies.

Science.gov (United States)

Banerjee, Chiranjib; Singh, Puneet Kumar; Shukla, Pratyoosh

2016-03-01

Exploring the efficiency of algae to produce remarkable products can be directly benefitted by studying its mechanism at systems level. Recent advents in biotechnology like flux balance analysis (FBA), genomics and in silico proteomics minimize the wet lab exertion. It is understood that FBA predicts the metabolic products, metabolic pathways and alternative pathway to maximize the desired product, and these are key components for microalgae bio-engineering. This review encompasses recent transgenesis techniques and metabolic engineering strategies applied to different microalgae for improving different traits. Further it also throws light on RNAi and riboswitch engineering based methods which may be advantageous for high throughput microalgal research. A valid and optimally designed microalga can be developed where every engineering strategies meet each other successfully and will definitely fulfill the market needs. It is also to be noted that Omics (viz. genetic and metabolic manipulation with bioinformatics) should be integrated to develop a strain which could prove to be a futuristic solution for sustainable development for energy. Copyright © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Composition and Quantitation of Microalgal Lipids by ERETIC 1H NMR Method

Directory of Open Access Journals (Sweden)

Angelo Fontana

2013-09-01

Full Text Available Accurate characterization of biomass constituents is a crucial aspect of research in the biotechnological application of natural products. Here we report an efficient, fast and reproducible method for the identification and quantitation of fatty acids and complex lipids (triacylglycerols, glycolipids, phospholipids in microalgae under investigation for the development of functional health products (probiotics, food ingredients, drugs, etc. or third generation biofuels. The procedure consists of extraction of the biological matrix by modified Folch method and direct analysis of the resulting material by proton nuclear magnetic resonance (1H NMR. The protocol uses a reference electronic signal as external standard (ERETIC method and allows assessment of total lipid content, saturation degree and class distribution in both high throughput screening of algal collection and metabolic analysis during genetic or culturing studies. As proof of concept, the methodology was applied to the analysis of three microalgal species (Thalassiosira weissflogii, Cyclotella cryptica and Nannochloropsis salina which drastically differ for the qualitative and quantitative composition of their fatty acid-based lipids.

Microalgal Mass Culture Data from Greenhouse Tanks

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Data is collected during experiments growing marine microalgae, on a pilot scale, to improve culture methods and yield. Cultures are typically 450 liters in...

Marine renewable energy policy in China and recommendations for improving implementation

Science.gov (United States)

Wang, Haifeng; Wang, Ji; Liu, Yuxin; Chen, Libo

2018-02-01

Renewable energy is the effective solution for the harmonious coexistence of human and environment as well as for the sustainable development. Marine renewable energy as one of the renewable energies, potentially offer fewer environmental risks and thus community acceptance than other renewable energy developments. Government support is the key and initial power for developing marine renewable energy. To promote the development and utilization of marine renewable energy, the Chinese government has established the special funding plan for marine renewable energy, and released “the 13th Five-years Plan (2016-2020) for marine renewable energy”. This paper describes the mechanisms established by the marine renewable Energy policy in China, and provides a comparative analysis of the Chinese marine renewable energy policy framework. We provides some policy recommendations for future development of marine renewable energy in China.

Exploring Social Resilience in Madagascar's Marine Protected Areas

OpenAIRE

Joshua Cinner; Mariana M. P. B. Fuentes; Herilala Randriamahazo

2009-01-01

We examined and compared aspects of local-level resilience in 13 coastal communities within and adjacent to all of Madagascar's national marine protected areas. Our examination of social resilience focused on indicators of the flexibility of household livelihood portfolios and both formal and informal governance institutions, the capacity of communities to organize, their capacity to learn, and access to household assets and community infrastructure. In general, we found high levels of flexib...

Experimental Warming Decreases the Average Size and Nucleic Acid Content of Marine Bacterial Communities

KAUST Repository

Huete-Stauffer, Tamara M.

2016-05-23

Organism size reduction with increasing temperature has been suggested as a universal response to global warming. Since genome size is usually correlated to cell size, reduction of genome size in unicells could be a parallel outcome of warming at ecological and evolutionary time scales. In this study, the short-term response of cell size and nucleic acid content of coastal marine prokaryotic communities to temperature was studied over a full annual cycle at a NE Atlantic temperate site. We used flow cytometry and experimental warming incubations, spanning a 6°C range, to analyze the hypothesized reduction with temperature in the size of the widespread flow cytometric bacterial groups of high and low nucleic acid content (HNA and LNA bacteria, respectively). Our results showed decreases in size in response to experimental warming, which were more marked in 0.8 μm pre-filtered treatment rather than in the whole community treatment, thus excluding the role of protistan grazers in our findings. Interestingly, a significant effect of temperature on reducing the average nucleic acid content (NAC) of prokaryotic cells in the communities was also observed. Cell size and nucleic acid decrease with temperature were correlated, showing a common mean decrease of 0.4% per °C. The usually larger HNA bacteria consistently showed a greater reduction in cell and NAC compared with their LNA counterparts, especially during the spring phytoplankton bloom period associated to maximum bacterial growth rates in response to nutrient availability. Our results show that the already smallest planktonic microbes, yet with key roles in global biogeochemical cycling, are likely undergoing important structural shrinkage in response to rising temperatures.

Experimental Warming Decreases the Average Size and Nucleic Acid Content of Marine Bacterial Communities

KAUST Repository

Huete-Stauffer, Tamara M.; Arandia-Gorostidi, Nestor; Alonso-Sá ez, Laura; Moran, Xose Anxelu G.

2016-01-01

Organism size reduction with increasing temperature has been suggested as a universal response to global warming. Since genome size is usually correlated to cell size, reduction of genome size in unicells could be a parallel outcome of warming at ecological and evolutionary time scales. In this study, the short-term response of cell size and nucleic acid content of coastal marine prokaryotic communities to temperature was studied over a full annual cycle at a NE Atlantic temperate site. We used flow cytometry and experimental warming incubations, spanning a 6°C range, to analyze the hypothesized reduction with temperature in the size of the widespread flow cytometric bacterial groups of high and low nucleic acid content (HNA and LNA bacteria, respectively). Our results showed decreases in size in response to experimental warming, which were more marked in 0.8 μm pre-filtered treatment rather than in the whole community treatment, thus excluding the role of protistan grazers in our findings. Interestingly, a significant effect of temperature on reducing the average nucleic acid content (NAC) of prokaryotic cells in the communities was also observed. Cell size and nucleic acid decrease with temperature were correlated, showing a common mean decrease of 0.4% per °C. The usually larger HNA bacteria consistently showed a greater reduction in cell and NAC compared with their LNA counterparts, especially during the spring phytoplankton bloom period associated to maximum bacterial growth rates in response to nutrient availability. Our results show that the already smallest planktonic microbes, yet with key roles in global biogeochemical cycling, are likely undergoing important structural shrinkage in response to rising temperatures.

Basin-scale seasonal changes in marine free-living bacterioplankton community in the Ofunato Bay

KAUST Repository

Reza, Md. Shaheed

2018-04-26

The Ofunato Bay in the northeastern Pacific Ocean area of Japan possesses the highest biodiversity of marine organisms in the world and has attracted much attention due to its economic and environmental importance. We report here a shotgun metagenomic analysis of the year-round variation in free-living bacterioplankton collected across the entire length of the bay. Phylogenetic differences among spring, summer, autumn and winter bacterioplankton suggested that members of Proteobacteria tended to decrease at high water temperatures and increase at low temperatures. It was revealed that Candidatus Pelagibacter varied seasonally, reaching as much as 60% of all sequences at the genus level in the surface waters during winter. This increase was more evident in the deeper waters, where they reached up to 75%. The relative abundance of Planktomarina also rose during winter and fell during summer. A significant component of the winter bacterioplankton community was Archaea (mainly represented by Nitrosopumilus), as their relative abundance was very low during spring and summer but high during winter. In contrast, Actinobacteria and Cyanobacteria appeared to be higher in abundance during high-temperature periods. It was also revealed that Bacteroidetes constituted a significant component of the summer bacterioplankton community, being the second largest bacterial phylum detected in the Ofunato Bay. Its members, notably Polaribacter and Flavobacterium, were found to be high in abundance during spring and summer, particularly in the surface waters. Principal component analysis and hierarchal clustering analyses showed that the bacterial communities in the Ofunato Bay changed seasonally, likely caused by the levels of organic matter, which would be deeply mixed with surface runoff in the winter.

Utilization of distillery stillage for energy generation and concurrent production of valuable microalgal biomass in the sequence: Biogas-cogeneration-microalgae-products

Energy Technology Data Exchange (ETDEWEB)

Douskova, Irena; Doucha, Jiri; Zachleder, Vilem [Laboratory of Cell Cycles of Algae, Department of Autotrophic Microorganisms, Institute of Microbiology of the Academy of Sciences of the Czech Republic, Novohradska 237, 379 81 Trebon - Opatovicky mlyn (Czech Republic); Kastanek, Frantisek; Maleterova, Ywette [Institute of Chemical Process Fundamentals of the Academy of Sciences of the Czech Republic, Rozvojova 135, 16502 Prague 6 - Suchdol (Czech Republic); Kastanek, Petr [Biocen, Ltd., Ondrickova 1246/13, 13000 Praha - Zizkov (Czech Republic)

2010-03-15

The aim of the study was the experimental verification of a proposed novel technology of energy and materials production, consisting of the following process steps: production of biogas from agricultural waste (distillery stillage), presumed utilization of biogas for electricity and heat production (cogeneration) in association with its use as a source of carbon dioxide for microalgae cultivation. The microalgal biomass can be hereafter processed to valuable products such as food and feed supplements. A part of the process wastewater can be utilized as a nitrogen source (ammonium ions) for microalgae cultivation, so the whole process is technologically closed. The tests were performed in a pilot-scale device. Optimization of biogas production from distillery stillage is described. The growth kinetics of microalgae Chlorella sp. consuming biogas or mixture of air and carbon dioxide in the concentration range of 2-20% (v/v) (simulating a flue gas from biogas incineration) in laboratory-scale photo-bioreactors are presented. It was proven that the raw biogas (even without the removal of hydrogen sulphide) could be used as a source of carbon dioxide for growth of microalgae. The growth rate of microalgae consuming biogas was the same as the growth rate of the culture grown on a mixture of air and food-grade carbon dioxide. Using biogas as a source of carbon dioxide has two main advantages: the biomass production costs are reduced and the produced biomass does not contain harmful compounds, which can occur in flue gases. The microalgal growth in bubbled cylinders was typically linear with time. The growth rate dependence on the diameter of the photobioreactor can be correlated using an empirical formula M = 2.2 D{sup -0.8} (valid for the linear bubbling velocities in the range of w = 0.1-0.3 cm/s), where M is the growth rate in g/L/h, and D is the photobioreactor diameter in mm. Processing of the fermenter wastewater was also quantified. Particularly the removal of

Utilization of distillery stillage for energy generation and concurrent production of valuable microalgal biomass in the sequence: Biogas-cogeneration-microalgae-products

International Nuclear Information System (INIS)

Douskova, Irena; Kastanek, Frantisek; Maleterova, Ywette; Kastanek, Petr; Doucha, Jiri; Zachleder, Vilem

2010-01-01

The aim of the study was the experimental verification of a proposed novel technology of energy and materials production, consisting of the following process steps: production of biogas from agricultural waste (distillery stillage), presumed utilization of biogas for electricity and heat production (cogeneration) in association with its use as a source of carbon dioxide for microalgae cultivation. The microalgal biomass can be hereafter processed to valuable products such as food and feed supplements. A part of the process wastewater can be utilized as a nitrogen source (ammonium ions) for microalgae cultivation, so the whole process is technologically closed. The tests were performed in a pilot-scale device. Optimization of biogas production from distillery stillage is described. The growth kinetics of microalgae Chlorella sp. consuming biogas or mixture of air and carbon dioxide in the concentration range of 2-20% (v/v) (simulating a flue gas from biogas incineration) in laboratory-scale photo-bioreactors are presented. It was proven that the raw biogas (even without the removal of hydrogen sulphide) could be used as a source of carbon dioxide for growth of microalgae. The growth rate of microalgae consuming biogas was the same as the growth rate of the culture grown on a mixture of air and food-grade carbon dioxide. Using biogas as a source of carbon dioxide has two main advantages: the biomass production costs are reduced and the produced biomass does not contain harmful compounds, which can occur in flue gases. The microalgal growth in bubbled cylinders was typically linear with time. The growth rate dependence on the diameter of the photobioreactor can be correlated using an empirical formula M = 2.2 D -0.8 (valid for the linear bubbling velocities in the range of w = 0.1-0.3 cm/s), where M is the growth rate in g/L/h, and D is the photobioreactor diameter in mm. Processing of the fermenter wastewater was also quantified. Particularly the removal of ammonia

Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea off Vulcano, Italy.

Science.gov (United States)

Kerfahi, Dorsaf; Hall-Spencer, Jason M; Tripathi, Binu M; Milazzo, Marco; Lee, Junghoon; Adams, Jonathan M

2014-05-01

The effects of increasing atmospheric CO(2) on ocean ecosystems are a major environmental concern, as rapid shoaling of the carbonate saturation horizon is exposing vast areas of marine sediments to corrosive waters worldwide. Natural CO(2) gradients off Vulcano, Italy, have revealed profound ecosystem changes along rocky shore habitats as carbonate saturation levels decrease, but no investigations have yet been made of the sedimentary habitat. Here, we sampled the upper 2 cm of volcanic sand in three zones, ambient (median pCO(2) 419 μatm, minimum Ω(arag) 3.77), moderately CO(2)-enriched (median pCO(2) 592 μatm, minimum Ω(arag) 2.96), and highly CO(2)-enriched (median pCO(2) 1611 μatm, minimum Ω(arag) 0.35). We tested the hypothesis that increasing levels of seawater pCO(2) would cause significant shifts in sediment bacterial community composition, as shown recently in epilithic biofilms at the study site. In this study, 454 pyrosequencing of the V1 to V3 region of the 16S rRNA gene revealed a shift in community composition with increasing pCO(2). The relative abundances of most of the dominant genera were unaffected by the pCO(2) gradient, although there were significant differences for some 5 % of the genera present (viz. Georgenia, Lutibacter, Photobacterium, Acinetobacter, and Paenibacillus), and Shannon Diversity was greatest in sediments subject to long-term acidification (>100 years). Overall, this supports the view that globally increased ocean pCO(2) will be associated with changes in sediment bacterial community composition but that most of these organisms are resilient. However, further work is required to assess whether these results apply to other types of coastal sediments and whether the changes in relative abundance of bacterial taxa that we observed can significantly alter the biogeochemical functions of marine sediments.

Examining predator–prey body size, trophic level and body mass across marine and terrestrial mammals

Science.gov (United States)

Tucker, Marlee A.; Rogers, Tracey L.

2014-01-01

Predator–prey relationships and trophic levels are indicators of community structure, and are important for monitoring ecosystem changes. Mammals colonized the marine environment on seven separate occasions, which resulted in differences in species' physiology, morphology and behaviour. It is likely that these changes have had a major effect upon predator–prey relationships and trophic position; however, the effect of environment is yet to be clarified. We compiled a dataset, based on the literature, to explore the relationship between body mass, trophic level and predator–prey ratio across terrestrial (n = 51) and marine (n = 56) mammals. We did not find the expected positive relationship between trophic level and body mass, but we did find that marine carnivores sit 1.3 trophic levels higher than terrestrial carnivores. Also, marine mammals are largely carnivorous and have significantly larger predator–prey ratios compared with their terrestrial counterparts. We propose that primary productivity, and its availability, is important for mammalian trophic structure and body size. Also, energy flow and community structure in the marine environment are influenced by differences in energy efficiency and increased food web stability. Enhancing our knowledge of feeding ecology in mammals has the potential to provide insights into the structure and functioning of marine and terrestrial communities. PMID:25377460

An Overview on Marine Sponge-Symbiotic Bacteria as Unexhausted Sources for Natural Product Discovery

Directory of Open Access Journals (Sweden)

Candice M. Brinkmann

2017-09-01

Full Text Available Microbial symbiotic communities of marine macro-organisms carry functional metabolic profiles different to the ones found terrestrially and within surrounding marine environments. These symbiotic bacteria have increasingly been a focus of microbiologists working in marine environments due to a wide array of reported bioactive compounds of therapeutic importance resulting in various patent registrations. Revelations of symbiont-directed host specific functions and the true nature of host-symbiont interactions, combined with metagenomic advances detecting functional gene clusters, will inevitably open new avenues for identification and discovery of novel bioactive compounds of biotechnological value from marine resources. This review article provides an overview on bioactive marine symbiotic organisms with specific emphasis placed on the sponge-associated ones and invites the international scientific community to contribute towards establishment of in-depth information of the environmental parameters defining selection and acquisition of true symbionts by the host organisms.

77 FR 27188 - Extension of Application Period for Seats for the Channel Islands National Marine Sanctuary...

Science.gov (United States)

2012-05-09

... Period for Seats for the Channel Islands National Marine Sanctuary Advisory Council AGENCY: Office of National Marine Sanctuaries (ONMS), National Ocean Service (NOS), National Oceanic and Atmospheric... following vacant seats on the Channel Islands National Marine Sanctuary Advisory Council: Chumash Community...

Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea

Science.gov (United States)

Horak, Rachel E A; Qin, Wei; Schauer, Andy J; Armbrust, E Virginia; Ingalls, Anitra E; Moffett, James W; Stahl, David A; Devol, Allan H

2013-01-01

Archaeal ammonia oxidizers (AOAs) are increasingly recognized as prominent members of natural microbial assemblages. Evidence that links the presence of AOA with in situ ammonia oxidation activity is limited, and the abiotic factors that regulate the distribution of AOA natural assemblages are not well defined. We used quantitative PCR to enumerate amoA (encodes α-subunit of ammonia monooxygenase) abundances; AOA amoA gene copies greatly outnumbered ammonia-oxidizing bacteria and amoA transcripts were derived primarily from AOA throughout the water column of Hood Canal, Puget Sound, WA, USA. We generated a Michaelis–Menten kinetics curve for ammonia oxidation by the natural community and found that the measured Km of 98±14 nmol l−1 was close to that for cultivated AOA representative Nitrosopumilus maritimus SCM1. Temperature did not have a significant effect on ammonia oxidation rates for incubation temperatures ranging from 8 to 20 °C, which is within the temperature range for depths of measurable ammonia oxidation at the site. This study provides substantial evidence, through both amoA gene copies and transcript abundances and the kinetics response, that AOA are the dominant active ammonia oxidizers in this marine environment. We propose that future ammonia oxidation experiments use a Km for the natural community to better constrain ammonia oxidation rates determined with the commonly used 15NH4+ dilution technique. PMID:23657360

Decomposition in pelagic marine ecosytems

International Nuclear Information System (INIS)

Lucas, M.I.

1986-01-01

During the decomposition of plant detritus, complex microbial successions develop which are dominated in the early stages by a number of distinct bacterial morphotypes. The microheterotrophic community rapidly becomes heterogenous and may include cyanobacteria, fungi, yeasts and bactivorous protozoans. Microheterotrophs in the marine environment may have a biomass comparable to that of all other heterotrophs and their significance as a resource to higher trophic orders, and in the regeneration of nutrients, particularly nitrogen, that support 'regenerated' primary production, has aroused both attention and controversy. Numerous methods have been employed to measure heterotrophic bacterial production and activity. The most widely used involve estimates of 14 C-glucose uptake; the frequency of dividing cells; the incorporation of 3 H-thymidine and exponential population growth in predator-reduced filtrates. Recent attempts to model decomposition processes and C and N fluxes in pelagic marine ecosystems are described. This review examines the most sensitive components and predictions of the models with particular reference to estimates of bacterial production, net growth yield and predictions of N cycling determined by 15 N methodology. Directed estimates of nitrogen (and phosphorus) flux through phytoplanktonic and bacterioplanktonic communities using 15 N (and 32 P) tracer methods are likely to provide more realistic measures of nitrogen flow through planktonic communities

Diversity and biological activities of the bacterial community associated with the marine sponge Phorbas tenacior (Porifera, Demospongiae).

Science.gov (United States)

Dupont, S; Carré-Mlouka, A; Descarrega, F; Ereskovsky, A; Longeon, A; Mouray, E; Florent, I; Bourguet-Kondracki, M L

2014-01-01

The diversity of the cultivable microbiota of the marine sponge Phorbas tenacior frequently found in the Mediterranean Sea was investigated, and its potential as a source of antimicrobial, antioxidant and antiplasmodial compounds was evaluated. The cultivable bacterial community was studied by isolation, cultivation and 16S rRNA gene sequencing. Twenty-three bacterial strains were isolated and identified in the Proteobacteria (α or γ classes) and Actinobacteria phyla. Furthermore, three different bacterial morphotypes localized extracellularly within the sponge tissues were revealed by microscopic observations. Bacterial strains were assigned to seven different genera, namely Vibrio, Photobacterium, Shewanella, Pseudomonas, Ruegeria, Pseudovibrio and Citricoccus. The strains affiliated to the same genus were differentiated according to their genetic dissimilarities using random amplified polymorphic DNA (RAPD) analyses. Eleven bacterial strains were selected for evaluation of their bioactivities. Three isolates Pseudovibrio P1Ma4, Vibrio P1MaNal1 and Citricoccus P1S7 revealed antimicrobial activity; Citricoccus P1S7 and Vibrio P1MaNal1 isolates also exhibited antiplasmodial activity, while two Vibrio isolates P1Ma8 and P1Ma5 displayed antioxidant activity. These data confirmed the importance of Proteobacteria and Actinobacteria associated with marine sponges as a reservoir of bioactive compounds. This study presents the first report on the diversity of the cultivable bacteria associated with the marine sponge Phorbas tenacior, frequently found in the Mediterranean Sea. Evaluation of the antiplasmodial, antimicrobial and antioxidant activities of the isolates has been investigated and allowed to select bacterial strains, confirming the importance of Proteobacteria and Actinobacteria as sources of bioactive compounds. © 2013 The Society for Applied Microbiology.

The Bacterial Symbiont Phaeobacter inhibens Shapes the Life History of Its Algal Host Emiliania huxleyi

Directory of Open Access Journals (Sweden)

Anna R. Bramucci

2018-05-01

Full Text Available Marine microbes form host-associated biofilm communities that are shaped by complex interactions between bacteria and their host. The roseobacter Phaeobacter inhibens exploits both symbiotic and pathogenic niches while interacting with its microalgal host Emiliania huxleyi. During co-cultivation over extended periods with E. huxleyi, we show that P. inhibens selectively kills two host cell types, the diploid calcifying strain and the haploid flagellated strain. Meanwhile, various non-calcifying diploid strains are resistant to this pathogen or the pathogen is avirulent to this cell type. This differential pathogenesis has the potential of dramatically altering the composition of E. huxleyi blooms, which are typically dominated by the roseobacter-susceptible calcifying strain. This cell type makes calcite plates, which are an important sink in the marine carbon cycle and forms part of the marine paleobotanic record. P. inhibens kills the haploid cells, which have been proposed as critical to the survival of the algae, as they readily escape both eukaryotic predation and viral infection. Consequently, bacteria such as P. inhibens could influence E. huxleyi's life history by selective pathogenesis, thereby altering the composition of cell types within E. huxleyi populations and its bloom-bust lifestyle.

Community Change within a Caribbean Coral Reef Marine Protected Area following Two Decades of Local Management

KAUST Repository

Noble, Mae M.

2013-01-14

Structural change in both the habitat and reef-associated fish assemblages within spatially managed coral reefs can provide key insights into the benefits and limitations of Marine Protected Areas (MPAs). While MPA zoning effects on particular target species are well reported, we are yet to fully resolve the various affects of spatial management on the structure of coral reef communities over decadal time scales. Here, we document mixed affects of MPA zoning on fish density, biomass and species richness over the 21 years since establishment of the Saba Marine Park (SMP). Although we found significantly greater biomass and species richness of reef-associated fishes within shallow habitats (5 meters depth) closed to fishing, this did not hold for deeper (15 m) habitats, and there was a widespread decline (38% decrease) in live hard coral cover and a 68% loss of carnivorous reef fishes across all zones of the SMP from the 1990s to 2008. Given the importance of live coral for the maintenance and replenishment of reef fishes, and the likely role of chronic disturbance in driving coral decline across the region, we explore how local spatial management can help protect coral reef ecosystems within the context of large-scale environmental pressures and disturbances outside the purview of local MPA management. © 2013 Noble et al.

Growth - Sustainable aquafeeds for marine finfish: Effects of vegetable oil replacement feeds containing novel microalgal and fungal oils on growth performance of juvenile sablefish

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The concomitant replacement of fish meal and fish oil in carnivorous marine fish feeds by more sustainable terrestrial alternatives is problematic due to the limited...

Composition and predicted functional ecology of mussel - associated bacteria in Indonesian marine lakes

NARCIS (Netherlands)

Cleary, D.F.R.; Becking, L.E.; Polonia, A.; Freitas, R.M.; Gomes, N.

2015-01-01

In the present study, we sampled bacterial communities associated with mussels inhabiting two distinct coastal marine ecosystems in Kalimantan, Indonesia, namely, marine lakes and coastal mangroves. We used 16S rRNA gene pyrosequencing and predicted metagenomic analysis to compare microbial

Rocky intertidal macrobenthic communities across a large-scale estuarine gradient

Directory of Open Access Journals (Sweden)

Luis Giménez

2010-03-01

Full Text Available We evaluated relationships between (1 salinity and species richness and (2 frontal zones and community structure for the rocky intertidal macrobenthic community of the Uruguayan coast. A large-scale sampling design (extent ~500 km covering 9 rocky shores across 3 intertidal levels was performed between September and November 2002. The linear relationship between salinity and species richness (minimum at the freshwater extreme and the lack of correlation between variation in salinity and richness rejected two previous empirical models, explaining variations in species richness along the salinity gradient. Other factors (e.g. turbidity may explain this discrepancy. The estuarine front defined two communities—freshwater and estuarine-marine—differing in species composition and richness. The freshwater community was characterised by low richness and few individuals confined to crevices or tide pools, and must be structured by physical processes (e.g. desiccation; the estuarine-marine community, with individuals occupying almost all available substrata, must be structured by both physical and biological processes. A marine front, separating estuarine and marine habitats, had a weak effect on community structure although estuarine and marine assemblages differed according to species characterising different functional groups. We conclude that the position of the estuarine frontal zones is important for explaining large-scale patterns of community structure in the study area.

Using expert informed GIS to locate important marine social-ecological hotspots.

Science.gov (United States)

Mahboubi, Pouyan; Parkes, Margot; Stephen, Craig; Chan, Hing Man

2015-09-01

The marine environment provides significant benefits to many local communities. Pressure to develop coastal waterways worldwide creates an urgent need for tools to locate marine spaces that have important social or ecological values, and to quantify their relative importance. The primary objective of this study was to develop, apply and critically assess a tool to identify important social-ecological hotspots in the marine environment. The study was conducted in a typical coastal community in northern British Columbia, Canada. This expert-informed GIS, or xGIS, tool used a survey instrument to draw on the knowledge of local experts from a range of backgrounds with respect to a series of 12 social-ecological value attributes, such as biodiversity, cultural and economic values. We identified approximately 1500 polygons on marine maps and assigned relative values to them using a token distribution exercise. A series of spatial statistical analyses were performed to locate and quantify the relative social-ecological importance of marine spaces and the results were ultimately summarized in a single hotspot map of the entire study area. This study demonstrates the utility of xGIS as a useful tool for stakeholders and environmental managers engaged in the planning and management of marine resources at the local and regional levels. Copyright © 2015 Elsevier Ltd. All rights reserved.

Re-Structuring of Marine Communities Exposed to Environmental Change: A Global Study on the Interactive Effects of Species and Functional Richness

Science.gov (United States)

Wahl, Martin; Link, Heike; Alexandridis, Nicolaos; Thomason, Jeremy C.; Cifuentes, Mauricio; Costello, Mark J.; da Gama, Bernardo A. P.; Hillock, Kristina; Hobday, Alistair J.; Kaufmann, Manfred J.; Keller, Stefanie; Kraufvelin, Patrik; Krüger, Ina; Lauterbach, Lars; Antunes, Bruno L.; Molis, Markus; Nakaoka, Masahiro; Nyström, Julia; bin Radzi, Zulkamal; Stockhausen, Björn; Thiel, Martin; Vance, Thomas; Weseloh, Annika; Whittle, Mark; Wiesmann, Lisa; Wunderer, Laura; Yamakita, Takehisa; Lenz, Mark

2011-01-01

Species richness is the most commonly used but controversial biodiversity metric in studies on aspects of community stability such as structural composition or productivity. The apparent ambiguity of theoretical and experimental findings may in part be due to experimental shortcomings and/or heterogeneity of scales and methods in earlier studies. This has led to an urgent call for improved and more realistic experiments. In a series of experiments replicated at a global scale we translocated several hundred marine hard bottom communities to new environments simulating a rapid but moderate environmental change. Subsequently, we measured their rate of compositional change (re-structuring) which in the great majority of cases represented a compositional convergence towards local communities. Re-structuring is driven by mortality of community components (original species) and establishment of new species in the changed environmental context. The rate of this re-structuring was then related to various system properties. We show that availability of free substratum relates negatively while taxon richness relates positively to structural persistence (i.e., no or slow re-structuring). Thus, when faced with environmental change, taxon-rich communities retain their original composition longer than taxon-poor communities. The effect of taxon richness, however, interacts with another aspect of diversity, functional richness. Indeed, taxon richness relates positively to persistence in functionally depauperate communities, but not in functionally diverse communities. The interaction between taxonomic and functional diversity with regard to the behaviour of communities exposed to environmental stress may help understand some of the seemingly contrasting findings of past research. PMID:21611170

Pacific Island Network Marine Fish Monitoring Dataset - Transects

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The benthic marine community in the Pacific Island Network (PACN) is a complex ecologic system and a diverse taxonomic environment, including algae and corals and...

Antimicrobial Compounds from Marine Invertebrates-Derived Microorganisms.

Science.gov (United States)

Liu, Juan; Jung, Jee H; Liu, Yonghong

2016-01-01

It is known that marine invertebrates, including sponges, tunicates, cnidaria or mollusks, host affluent and various communities of symbiotic microorganisms. The microorganisms associated with the invertebrates metabolized various biologically active compounds, which could be an important resource for the discovery and development of potentially novel drugs. In this review, the new compounds with antimicrobial activity isolated from marine invertebrate-derived microorganisms in the last decade (2004-2014) will be presented, with focus on the relevant antimicrobial activities, origin of isolation, and information of strain species. New compounds without antimicrobial activity were not revealed.

Microalgae growth-promoting bacteria: A novel approach in wastewater treatment

Directory of Open Access Journals (Sweden)

Luz E. de-Bashan

2003-07-01

Full Text Available Plant growth-promoting bacteria (PGPB from the genus Azospirillum are known to enhance the growth of numerous agricultural crops. The use of these bacteria is proposed as "micro-algae-growth promoting bacteria" (MGPB for enhancing freshwater micro-algae Chlorella vulgaris and C. sorokiniana capadty to clean polluted water. The deliberate inoculation of Chlorella sp. with a terrestrial PGPB has not been reported prior to these studies, perhaps because of the different origin of the two micro-organisms. Chlorella spp. is not known to harbour any plant growth-promoting bacteria and Azospirillum sp. is rarely used for inoculation in aquatic environments. Co-immobilisation of C. vulgaris and A. brasilense Cd in small alginate beads resulted in significant increases in numerous micro-algae growth parameters. Dry and fresh weight, total number of cells, micro-algal cluster (colonies size within the bead, number of micro-algal cells per cluster and micro-algal pigments levels significantly increased. Lipids and the variety of fatty adds also significantly increased, as did the combination of micro-algae. MGPB had superior capacity for removing ammonium and phosphorus from polluted synthetic and municipal wastewaters than the micro-algae by itself. Other PGPB (i.e. Flavobacterium sp. Azospirillum sp. and Azotobacter sp. are currently being tested in aquaculture; carp farming using enhanced phytoplankton growth and stabilising mass marine micro-algae culture for use as feed for marine organisms are both retuming promising results. This aspect of PGPB effect on water micro-organisms is currently in its infancy. We pro pose that co-immobilising micro-algae and plant growth-promoting bacteria represent an effective means of increasing micro-algal populations and also their capacity for cleaning polluted water. Key words: PGPB; micro-algae; wastewater treatment; co-immobilised

Examining predator-prey body size, trophic level and body mass across marine and terrestrial mammals.

Science.gov (United States)

Tucker, Marlee A; Rogers, Tracey L

2014-12-22

Predator-prey relationships and trophic levels are indicators of community structure, and are important for monitoring ecosystem changes. Mammals colonized the marine environment on seven separate occasions, which resulted in differences in species' physiology, morphology and behaviour. It is likely that these changes have had a major effect upon predator-prey relationships and trophic position; however, the effect of environment is yet to be clarified. We compiled a dataset, based on the literature, to explore the relationship between body mass, trophic level and predator-prey ratio across terrestrial (n = 51) and marine (n = 56) mammals. We did not find the expected positive relationship between trophic level and body mass, but we did find that marine carnivores sit 1.3 trophic levels higher than terrestrial carnivores. Also, marine mammals are largely carnivorous and have significantly larger predator-prey ratios compared with their terrestrial counterparts. We propose that primary productivity, and its availability, is important for mammalian trophic structure and body size. Also, energy flow and community structure in the marine environment are influenced by differences in energy efficiency and increased food web stability. Enhancing our knowledge of feeding ecology in mammals has the potential to provide insights into the structure and functioning of marine and terrestrial communities. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

dEMBF: A Comprehensive Database of Enzymes of Microalgal Biofuel Feedstock.

Science.gov (United States)

Misra, Namrata; Panda, Prasanna Kumar; Parida, Bikram Kumar; Mishra, Barada Kanta

2016-01-01

Microalgae have attracted wide attention as one of the most versatile renewable feedstocks for production of biofuel. To develop genetically engineered high lipid yielding algal strains, a thorough understanding of the lipid biosynthetic pathway and the underpinning enzymes is essential. In this work, we have systematically mined the genomes of fifteen diverse algal species belonging to Chlorophyta, Heterokontophyta, Rhodophyta, and Haptophyta, to identify and annotate the putative enzymes of lipid metabolic pathway. Consequently, we have also developed a database, dEMBF (Database of Enzymes of Microalgal Biofuel Feedstock), which catalogues the complete list of identified enzymes along with their computed annotation details including length, hydrophobicity, amino acid composition, subcellular location, gene ontology, KEGG pathway, orthologous group, Pfam domain, intron-exon organization, transmembrane topology, and secondary/tertiary structural data. Furthermore, to facilitate functional and evolutionary study of these enzymes, a collection of built-in applications for BLAST search, motif identification, sequence and phylogenetic analysis have been seamlessly integrated into the database. dEMBF is the first database that brings together all enzymes responsible for lipid synthesis from available algal genomes, and provides an integrative platform for enzyme inquiry and analysis. This database will be extremely useful for algal biofuel research. It can be accessed at http://bbprof.immt.res.in/embf.

Participatory Sensing Marine Debris: Current Trends and Future Opportunities

Science.gov (United States)

Jambeck, J.; Johnsen, K.

2016-02-01

The monitoring of litter and debris is challenging at the global scale because of spatial and temporal variability, disconnected local organizations and the use of paper and pen for documentation. The Marine Debris Tracker mobile app and citizen science program allows for the collection of global standardized data at a scale, speed and efficiency that was not previously possible. The app itself also serves as an outreach and education tool, creating an engaged participatory sensing instrument. This instrument is characterized by several aspects including range and frequency, accuracy and precision, accessibility, measurement dimensions, participant performance, and statistical analysis. Also, important to Marine Debris Tracker is open data and transparency. A web portal provides data that users have logged allowing immediate feedback to users and additional education opportunities. The engagement of users through a top tracker competition and social media keeps participants interested in the Marine Debris Tracker community. Over half a million items have been tracked globally, and maps provide both global and local distribution of data. The Marine Debris Tracker community and dataset continues to grow daily. We will present current usage and engagement, participatory sensing data distributions, choropleth maps of areas of active tracking, and discuss future technologies and platforms to expand data collection and conduct statistical analysis.

Census of biodiversity in marine caves of the eastern Mediterranean Sea

Directory of Open Access Journals (Sweden)

V. GEROVASILEIOU

2015-03-01

Full Text Available Scientific information on the biodiversity of marine caves in the eastern Mediterranean is limited, especially when considering the extensively studied caves of the north-western and central Mediterranean. Aiming to enhance current knowledge regarding cave communities, this study represents a first assessment of the marine cave biota of the eastern Mediterranean, as this has been defined by the European Union’s Marine Strategy Framework Directive (MSFD. Information retrieved from an extensive overview of relevant scientific documents was combined with original data recorded from 23 marine caves of the north-eastern Mediterranean. Our results report a total of 520 taxa recorded in eastern Mediterranean marine caves to date, the majority of which are sponges, polychaetes, rhodophytes, bivalves, fishes, and gastropods. These include several protected, endemic, and alien species. However, not all taxonomic groups have been equally studied among different areas and future studies are expected to raise the number of endemic and alien species. The overall observed trend is that the reported species number is generally related to sampling effort and scientific expertise. The most well-studied marine cave communities of the eastern Mediterranean are those of the Aegean Sea (especially its northern sector, which presented the highest number of species, followed by those of the Levantine. Furthermore, our research in Aegean caves revealed numerous new records for the marine cave fauna of the eastern basin, while several species are reported for the first time in the marine cave habitat. The critical need for further scientific research, monitoring, and conservation of this unique ecosystem was highlighted by (i the presence of certain species endemic to the eastern Mediterranean coupled with a high proportion of alien species, especially in the Levantine, and (ii the marine cave habitat availability in isolated insular areas of the eastern Mediterranean.

Size structure of marine soft-bottom macrobenthic communities across natural habitat gradients: implications for productivity and ecosystem function.

Directory of Open Access Journals (Sweden)

Tara A Macdonald

Full Text Available Size distributions of biotic assemblages are important modifiers of productivity and function in marine sediments. We investigated the distribution of proportional organic biomass among logarithmic size classes (2(-6J to 2(16J in the soft-bottom macrofaunal communities of the Strait of Georgia, Salish Sea on the west coast of Canada. The study examines how size structure is influenced by 3 fundamental habitat descriptors: depth, sediment percent fines, and organic flux (modified by quality. These habitat variables are uncorrelated in this hydrographically diverse area, thus we examine their effects in combination and separately. Cluster analyses and cumulative biomass size spectra reveal clear and significant responses to each separate habitat variable. When combined, habitat factors result in three distinct assemblages: (1 communities with a high proportion of biomass in small organisms, typical of shallow areas (3 g C/m(2/yr/δ(15N from the Fraser River; and (3 communities with biomass dominated by moderately large organisms, but lacking the smallest and largest size classes, typical of deep, fine sediments experiencing low modified organic flux (<3.0 gC/m(2/yr/δ(15N. The remaining assemblages had intermediate habitat types and size structures. Sediment percent fines and flux appear to elicit threshold responses in size structure, whereas depth has the most linear influence on community size structure. The ecological implications of size structure in the Strait of Georgia relative to environmental conditions, secondary production and sediment bioturbation are discussed.

Status of Coral Reef Fish Communities within the Mombasa Marine ...

African Journals Online (AJOL)

investigated in the Mombasa Marine Protected Area (MPA) on the Kenya coast ... in 1991 in an urban and tourism development ... Coast Province of Kenya in ..... environmental factors such as salinity and ... SEM when sampling is difficult.

Effects of Pollutants on Marine Life Probed

Science.gov (United States)

Chemical and Engineering News, 1973

1973-01-01

Discusses research activities conducted by scientists from the United State of America, Canada, and the United Kingdom to determine the long-term effects on natural marine ecosystems, especially plankton communities, of such pollutants as heavy metals, synthetic hydrocarbons, and petroleum hydrocarbons. (CC)

Madagascar's nascent locally managed marine area network ...

African Journals Online (AJOL)

Since 2004, the creation of locally managed marine areas (LMMAs) in Madagascar has exponentially increased, highlighting the need for improved information sharing between communities and between support organizations. Until recently, however, these LMMAs operated in relative isolation, with little communication or ...

Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria.

Science.gov (United States)

Vandieken, Verona; Pester, Michael; Finke, Niko; Hyun, Jung-Ho; Friedrich, Michael W; Loy, Alexander; Thamdrup, Bo

2012-11-01

Dissimilatory manganese reduction dominates anaerobic carbon oxidation in marine sediments with high manganese oxide concentrations, but the microorganisms responsible for this process are largely unknown. In this study, the acetate-utilizing manganese-reducing microbiota in geographically well-separated, manganese oxide-rich sediments from Gullmar Fjord (Sweden), Skagerrak (Norway) and Ulleung Basin (Korea) were analyzed by 16S rRNA-stable isotope probing (SIP). Manganese reduction was the prevailing terminal electron-accepting process in anoxic incubations of surface sediments, and even the addition of acetate stimulated neither iron nor sulfate reduction. The three geographically distinct sediments harbored surprisingly similar communities of acetate-utilizing manganese-reducing bacteria: 16S rRNA of members of the genera Colwellia and Arcobacter and of novel genera within the Oceanospirillaceae and Alteromonadales were detected in heavy RNA-SIP fractions from these three sediments. Most probable number (MPN) analysis yielded up to 10(6) acetate-utilizing manganese-reducing cells cm(-3) in Gullmar Fjord sediment. A 16S rRNA gene clone library that was established from the highest MPN dilutions was dominated by sequences of Colwellia and Arcobacter species and members of the Oceanospirillaceae, supporting the obtained RNA-SIP results. In conclusion, these findings strongly suggest that (i) acetate-dependent manganese reduction in manganese oxide-rich sediments is catalyzed by members of taxa (Arcobacter, Colwellia and Oceanospirillaceae) previously not known to possess this physiological function, (ii) similar acetate-utilizing manganese reducers thrive in geographically distinct regions and (iii) the identified manganese reducers differ greatly from the extensively explored iron reducers in marine sediments.

RNA:DNA Ratio and Other Nucleic Acid Derived Indices in Marine Ecology

Directory of Open Access Journals (Sweden)

Luis Chícharo

2008-08-01

Full Text Available Some of most used indicators in marine ecology are nucleic acid-derived indices. They can be divided by target levels in three groups: 1 at the organism level as ecophysiologic indicators, indicators such as RNA:DNA ratios, DNA:dry weight and RNA:protein, 2 at the population level, indicators such as growth rate, starvation incidence or fisheries impact indicators, and 3 at the community level, indicators such as trophic interactions, exergy indices and prey identification. The nucleic acids derived indices, especially RNA:DNA ratio, have been applied with success as indicators of nutritional condition, well been and growth in marine organisms. They are also useful as indicators of natural or anthropogenic impacts in marine population and communities, such as upwelling or dredge fisheries, respectively. They can help in understanding important issues of marine ecology such as trophic interactions in marine environment, fish and invertebrate recruitment failure and biodiversity changes, without laborious work of counting, measuring and identification of small marine organisms. Besides the objective of integrate nucleic acid derived indices across levels of organization, the paper will also include a general characterization of most used nucleic acid derived indices in marine ecology and also advantages and limitations of them. We can conclude that using indicators, such RNA:DNA ratios and other nucleic acids derived indices concomitantly with organism and ecosystems measures of responses to climate change (distribution, abundance, activity, metabolic rate, survival will allow for the development of more rigorous and realistic predictions of the effects of anthropogenic climate change on marine systems.

Microalgal CO2 sequestering – Modeling microalgae production costs

International Nuclear Information System (INIS)

Bilanovic, Dragoljub; Holland, Mark; Armon, Robert

2012-01-01

Highlights: ► Microalgae production costs were modeled as a function of specific expenses. ► The effects of uncontrollable expenses/factors were incorporated into the model. ► Modeled microalgae production costs were in the range $102–1503 t −1 ha −1 y −1 . - Abstract: Microalgae CO 2 sequestering facilities might become an industrial reality if microalgae biomass could be produced at cost below $500.00 t −1 . We develop a model for estimation of total production costs of microalgae as a function of known production-specific expenses, and incorporate into the model the effects of uncontrollable factors which affect known production-specific expenses. Random fluctuations were intentionally incorporated into the model, consequently into generated cost/technology scenarios, because each and every logically interconnected equipment/operation that is used in design/construction/operation/maintenance of a production process is inevitably subject to random cost/price fluctuations which can neither be eliminated nor a priori controlled. A total of 152 costs/technology scenarios were evaluated to find 44 scenarios in which predicted total production costs of microalgae (PTPCM) was in the range $200–500 t −1 ha −1 y −1 . An additional 24 scenarios were found with PTCPM in the range of $102–200 t −1 ha −1 y −1 . These findings suggest that microalgae CO 2 sequestering and the production of commercial compounds from microalgal biomass can be economically viable venture even today when microalgae production technology is still far from its optimum.

Anaerobic Methane-Oxidizing Microbial Community in a Coastal Marine Sediment: Anaerobic Methanotrophy Dominated by ANME-3.

Science.gov (United States)

Bhattarai, Susma; Cassarini, Chiara; Gonzalez-Gil, Graciela; Egger, Matthias; Slomp, Caroline P; Zhang, Yu; Esposito, Giovanni; Lens, Piet N L

2017-10-01

The microbial community inhabiting the shallow sulfate-methane transition zone in coastal sediments from marine Lake Grevelingen (The Netherlands) was characterized, and the ability of the microorganisms to carry out anaerobic oxidation of methane coupled to sulfate reduction was assessed in activity tests. In vitro activity tests of the sediment with methane and sulfate demonstrated sulfide production coupled to the simultaneous consumption of sulfate and methane at approximately equimolar ratios over a period of 150 days. The maximum sulfate reduction rate was 5 μmol sulfate per gram dry weight per day during the incubation period. Diverse archaeal and bacterial clades were retrieved from the sediment with the majority of them clustered with Euryarchaeota, Thaumarcheota, Bacteroidetes, and Proteobacteria. The 16S rRNA gene sequence analysis showed that the sediment from marine Lake Grevelingen contained anaerobic methanotrophic Archaea (ANME) and methanogens as archaeal clades with a role in the methane cycling. ANME at the studied site mainly belong to the ANME-3 clade. This study provides one of the few reports for the presence of ANME-3 in a shallow coastal sediment. Sulfate-reducing bacteria from Desulfobulbus clades were found among the sulfate reducers, however, with very low relative abundance. Desulfobulbus has previously been commonly found associated with ANME, whereas in our study, ANME-3 and Desulfobulbus were not observed simultaneously in clusters, suggesting the possibility of independent AOM by ANME-3.

Differences in composition of shallow-water marine benthic communities associated with two ophiolitic rock substrata

Science.gov (United States)

Bavestrello, Giorgio; Bo, Marzia; Betti, Federico; Canessa, Martina; Gaggero, Laura; Rindi, Fabio; Cattaneo-Vietti, Riccardo

2018-01-01

On marine rocky shores, several physical, chemical and biological processes operate to maintain the benthic assemblages' heterogeneity, but among the abiotic factors, the composition and texture of the rocky substrata have been only sporadically considered. However, biomineralogical studies have demonstrated an unsuspected ability of the benthic organisms to interact at different levels with rocky substrata. Therefore, the mineralogy of the substratum can affect the structure of benthic communities. To evaluate this hypothesis, the macrobenthic assemblages developed on two different ophiolitic rocks (serpentinites and metagabbros) in contact at a restricted stretch of the western Ligurian Riviera (western Mediterranean Sea), with identical environmental and climatic conditions, were analysed. Samplings were carried out at four bathymetric levels (+1m, 0m, -1m, and -3m respect to the mean sea level) and the analysis of the data evidenced differences in terms of species distribution and percent coverage. Algal communities growing on metagabbros were poorer in species richness and showed a much simpler structure when compared to the assemblages occurring on the serpentinites. The most widely distributed animal organism, the barnacle Chthamalus stellatus, was dominant on serpentinites, and virtually absent on metagabbros. Our results suggest a complex pattern of interactions between lithology and benthic organisms operating through processes of inhibition/facilitation related to the mineral properties of the substratum.

Continuous microalgal cultivation in a laboratory-scale photobioreactor under seasonal day-night irradiation: experiments and simulation.

Science.gov (United States)

Bertucco, Alberto; Beraldi, Mariaelena; Sforza, Eleonora

2014-08-01

In this work, the production of Scenedesmus obliquus in a continuous flat-plate laboratory-scale photobioreactor (PBR) under alternated day-night cycles was tested both experimentally and theoretically. Variation of light intensity according to the four seasons of the year were simulated experimentally by a tunable LED lamp, and effects on microalgal growth and productivity were measured to evaluate the conversion efficiency of light energy into biomass during the different seasons. These results were used to validate a mathematical model for algae growth that can be applied to simulate a large-scale production unit, carried out in a flat-plate PBR of similar geometry. The cellular concentration in the PBR was calculated in both steady-state and transient conditions, and the value of the maintenance kinetic term was correlated to experimental profiles. The relevance of this parameter was finally outlined.

Novel schemes for production of biodiesel and value-added co-products from microalgal oil using heterogeneous catalysts

Science.gov (United States)

Dong, Tao

Microalgae are promising sources of biofuels primarily because of their higher potential productivity compared to terrestrial biofuel crops. However, the production of liquid fuels from microalgae suffers from a lack of viable methods of extraction, conversion and fractionation of various components of the algal biomass. In this dissertation study, a rapid method was developed to accurately evaluate the biodiesel potential of microalgae biomass. The major advantage of this method is in situ fatty acid methyl ester (FAME) preparation directly from wet fresh microalgal and yeast biomass, without prior solvent extraction or dehydration. FAMEs were prepared by a sequential alkaline hydrolysis and acidic esterification process. This method can be used even with high amount of water in the biomass and is applicable to a vast range of microalgae and yeast species. A two-step in situ process was also investigated in this study to obtain a high FAME yield from microalgae biomass that had high free fatty acids (FFA) content. This process has the potential to reduce the production cost of microalgae-derived FAME and be more environmental compatible due to the higher FAME yield with reduced catalyst consumption. A cost-effective bio-char based catalyst was tested for the two-step biodiesel production. The results indicated that the bio-char catalyst was superior to commercial Amberly-15. A scalable chlorophyll remove process was also developed as a part of the system. The research resulted in a practical and cost-effective approach for producing biodiesel from crude microalgal oil. An integrated approach was explored in the fourth part of the study to produce biodiesel and fractionate high-value polyunsaturated fatty acid (PUFA). Zeolites were employed as the catalyst for selective esterification of fatty acids according to their chain length and degree of saturation. Low-value short chain FFA could be largely converted into FAME, while PUFA would remain unreacted due to

Bacterial diversity in oil-polluted marine coastal sediments.

Science.gov (United States)

Acosta-González, Alejandro; Marqués, Silvia

2016-04-01

Marine environments harbour a persistent microbial seed which can be shaped by changes of the environmental conditions such as contamination by petroleum components. Oil spills, together with small but continuous discharges of oil from transportation and recreational activities, are important sources of hydrocarbon pollution within the marine realm. Consequently, prokaryotic communities have become well pre-adapted toward oil pollution, and many microorganisms that are exposed to its presence develop an active degradative response. The natural attenuation of oil pollutants, as has been demonstrated in many sites, is modulated according to the intrinsic environmental properties such as the availability of terminal electron acceptors and elemental nutrients, together with the degree of pollution and the type of hydrocarbon fractions present. Whilst dynamics in the bacterial communities in the aerobic zones of coastal sediments are well characterized and the key players in hydrocarbon biodegradation have been identified, the subtidal ecology of the anaerobic community is still not well understood. However, current data suggest common patterns of response in these ecosystems. Copyright © 2015 Elsevier Ltd. All rights reserved.

Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads

KAUST Repository

Gertler, Christoph

2015-04-29

Uric acid is a promising hydrophobic nitrogen source for biostimulation of microbial activities in oil-impacted marine environments. This study investigated metabolic processes and microbial community changes in a series of microcosms using sediment from the Mediterranean and the Red Sea amended with ammonium and uric acid. Respiration, emulsification, ammonium and protein concentration measurements suggested a rapid production of ammonium from uric acid accompanied by the development of microbial communities containing hydrocarbonoclastic bacteria after 3 weeks of incubation. About 80 % of uric acid was converted to ammonium within the first few days of the experiment. Microbial population dynamics were investigated by Ribosomal Intergenic Spacer Analysis and Illumina sequencing as well as by culture-based techniques. Resulting data indicated that strains related to Halomonas spp. converted uric acid into ammonium, which stimulated growth of microbial consortia dominated by Alcanivorax spp. and Pseudomonas spp. Several strains of Halomonas spp. were isolated on uric acid as the sole carbon source showed location specificity. These results point towards a possible role of halomonads in the conversion of uric acid to ammonium utilized by hydrocarbonoclastic bacteria. © 2015 Springer Science+Business Media New York

Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads

KAUST Repository

Gertler, Christoph; Bargiela, Rafael; Mapelli, Francesca; Han, Xifang; Chen, Jianwei; Hai, Tran; Amer, Ranya A.; Mahjoubi, Mouna; Malkawi, Hanan Issa; Magagnini, Mirko; Cherif, Ameur; Abdel-Fattah, Yasser Refaat; Kalogerakis, Nicolas E.; Daffonchio, Daniele; Ferrer, Manuel; Golyshin, Peter N.

2015-01-01

Uric acid is a promising hydrophobic nitrogen source for biostimulation of microbial activities in oil-impacted marine environments. This study investigated metabolic processes and microbial community changes in a series of microcosms using sediment from the Mediterranean and the Red Sea amended with ammonium and uric acid. Respiration, emulsification, ammonium and protein concentration measurements suggested a rapid production of ammonium from uric acid accompanied by the development of microbial communities containing hydrocarbonoclastic bacteria after 3 weeks of incubation. About 80 % of uric acid was converted to ammonium within the first few days of the experiment. Microbial population dynamics were investigated by Ribosomal Intergenic Spacer Analysis and Illumina sequencing as well as by culture-based techniques. Resulting data indicated that strains related to Halomonas spp. converted uric acid into ammonium, which stimulated growth of microbial consortia dominated by Alcanivorax spp. and Pseudomonas spp. Several strains of Halomonas spp. were isolated on uric acid as the sole carbon source showed location specificity. These results point towards a possible role of halomonads in the conversion of uric acid to ammonium utilized by hydrocarbonoclastic bacteria. © 2015 Springer Science+Business Media New York

Effects of temperature and irradiance on a benthic microalgal community: A combined two-dimensional oxygen and fluorescence imaging approach

DEFF Research Database (Denmark)

Hancke, Kasper; Sorrell, Brian Keith; Lund-Hansen, Lars Chresten

2014-01-01

The effects of temperature and light on both oxygen (O2) production and gross photosynthesis were resolved in a benthic microalgae community by combining two-dimensional (2D) imaging of O2 and variable chlorophyll a (Chl a) fluorescence. Images revealed a photosynthetically active community...... microbial community, at different temperatures. The present imaging approach demonstrates a great potential to study consequences of environmental effects on photosynthetic activity and O2 turnover in complex phototrophic benthic communities....

Chemical composition - Sustainable aquafeeds for marine finfish: Effects of vegetable oil replacement feeds containing novel microalgal and fungal oils on growth performance of juvenile sablefish

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The concomitant replacement of fish meal and fish oil in carnivorous marine fish feeds by more sustainable terrestrial alternatives is problematic due to the limited...

Lipid composition - Sustainable aquafeeds for marine finfish: Effects of vegetable oil replacement feeds containing novel microalgal and fungal oils on growth performance of juvenile sablefish

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The concomitant replacement of fish meal and fish oil in carnivorous marine fish feeds by more sustainable terrestrial alternatives is problematic due to the limited...

Research on intact marine ecosystems: a lost era.

Science.gov (United States)

Stachowitsch, Michael

2003-07-01

It is proposed that a new, fifth era should be added to the four historical phases of marine research identified by Rupert Riedl, specifically an era devoted to studying and ameliorating disturbed marine ecosystems. In an age of global environmental deterioration, many marine ecosystems and organisms are high on the list of threatened entities. This poor status prompts research that would otherwise have been unnecessary and hinders research that would normally have been conducted. I argue that research into intact marine ecosystems is becoming increasingly difficult, and that most of our future insights into marine habitats will stem from knowledge gained by examining various disfunctions of those systems rather than their functions. The new era will therefore differ from past research in its underlying aim, the range of topics studied, the selection and funding of those topics, the validity of its conclusions, and in its urgency. Sea turtles and cetaceans are cited as case studies at the organismic level, shallow-water benthic communities, including coral reefs, at the ecosystem level.

Irish Sea Marine Aggregate Initiative (IMAGIN) Technical Synthesis Report

OpenAIRE

Sutton, G.

2008-01-01

The Irish Sea Marine Aggregates Initiative (IMAGIN) is a collaborative project between Ireland and Wales focused on the sustainable management of marine aggregate resources. IMAGIN was a 2-year project with a total budget of €1.1 million. IMAGIN was part funded (66%) under the Ireland/Wales Inter Regional (INTERREG) IIIA Community Initiative Programme 2000-2006. The remaining project budget was met by contributions from partner organisations (19%) and aggregate companies – CEMEX, Lagan Ltd., ...

Contribution of transformation products towards the total herbicide toxicity to tropical marine organisms.

Science.gov (United States)

Mercurio, Philip; Eaglesham, Geoff; Parks, Stephen; Kenway, Matt; Beltran, Victor; Flores, Florita; Mueller, Jochen F; Negri, Andrew P

2018-03-19

The toxicity of herbicide degradation (transformation) products is rarely taken into account, even though these are commonly detected in the marine environment, sometimes at concentrations higher than the parent compounds. Here we assessed the potential contribution of toxicity by transformation products of five photosystem II herbicides to coral symbionts (Symbiodinium sp.), the green algae Dunaliella sp., and prawn (Penaeus monodon) larvae. Concentration-dependent inhibition of photosynthetic efficiency (∆F/F m ') was observed for all herbicides in both microalgal species. The toxicity of solutions of aged diuron solutions containing transformation products to Symbiodinium sp. and Dunaliella sp. was greater than could be explained by the concentrations of diuron measured, indicating transformation products contributed to the inhibition of ∆F/F m '. However, the toxicity of aged atrazine, simazine, hexazinone, and ametryn solutions could be explained by the concentration of parent herbicide, indicating no contribution by transformation products. Prawn larval metamorphosis was not sensitive to the herbicides, but preliminary results indicated some toxicity of the transformation products of atrazine and diuron. Risk assessments should take into account the contribution of herbicide transformation products; however, further studies are clearly needed to test the toxicity of a far wider range of transformation products to a representative diversity of relevant taxa.

Necromass as a source of energy to microorganisms in marine sediments.

Science.gov (United States)

Bradley, J.; Amend, J.; LaRowe, D.

2017-12-01

Marine sediments constitute one of the largest, most energy-limited biospheres on Earth. Despite increasing exploration and interest characterizing microbial communities in marine sediments, the production and role of microbial dead-matter (necromass) has largely been overlooked. Necromass is produced on a global scale, yet its significance as a power source to heterotrophic microorganisms remains unknown. We developed a physical, bio-energetic and geochemical model to quantify the total power supply from necromass oxidation and the total power demand of living microorganisms in marine sediments. This model is first applied to sediments from the oligotrophic South Pacific Gyre (SPG), where organic carbon and biomass concentrations are extremely low, yet microorganisms persist for millions of years in some of the lowest energy states on Earth. We show that necromass does not supply sufficient power to support the total demands of the living community (maintenance demands of microorganisms in marine sediments for up to 60,000 years following burial. Our model assumes that all counted cells are viable. Yet, if only a fraction of counted cells are alive, the role of necromass as an electron donor in fueling microbial metabolisms is even greater. This new insight requires a reassessment of carbon fluxes in the deep biosphere. By extension, we also demonstrate a mechanism for microbial communities to persist by oxidizing necromass over geological timescales, and thereby endure unfavorable, low-energy settings that might be analogous to conditions on early Earth and on other planetary bodies.

The Sea Floor: A Living Learning Residential Community

Science.gov (United States)

Guentzel, J. L.; Rosch, E.; Stoughton, M. A.; Bowyer, R.; Mortensen, K.; Smith, M.

2016-02-01

Living learning communities are collaborations between university housing and academic departments designed to enhance the overall student experience by integrating classroom/laboratory learning, student life and extracurricular activities. At Coastal Carolina University, the residential community associated with the Marine Science program is known as the Sea Floor. Students selected to become members of the Sea Floor remain "in residence" for two consecutive semesters. These students are first-time freshman that share a common course connection. This course is usually Introduction to Marine Science (MSCI 111) or MSCI 399s, which are one credit field/laboratory centered internships. The common course connection is designed so residents can establish and maintain an educational dialog with their peers. Activities designed to enhance the students' networking skills and educational and social development skills include monthly lunches with marine science faculty and dinner seminars with guest speakers from academia, industry and government. Additionally, each semester several activities outside the classroom are planned so that students can more frequently interact with themselves and their faculty and staff partners. These activities include field trips to regional aquariums, local boat trips that include water sample collection and analysis, and an alternative spring break trip to the Florida Keys to study the marine environment firsthand. The resident advisor that supervises the Sea Floor is usually a sophomore or junior marine science major. This provides the residents with daily communication and mentoring from a marine science major that is familiar with the marine science program and residence life. Assessment activities include: a university housing community living survey, student interest housing focus groups, fall to spring and fall to fall retention, and evaluation of program advisors and program activities.

Marine ecosystem analysis for wolsung nuclear power plant

International Nuclear Information System (INIS)

Lee, J.H.; Kim, Y.H.; Cho, T.J.

1982-01-01

Environmental surveys to provide base-line data for assessing the potential impact of the operation of Wolseong NPP on marine ecosystems were performed at 3-month intervals in 1981. Physico-chemical properties of seawater and gross beta activities in seawater and marine organisms were examined. The result shows that the ecosystems are non-polluted, typical of near-shore waters. The results of ecological surveys are summarized as follows: A total of 84 taxa of phytoplankton diatom were identified. Of the species, about 70 % are described as neritic species, and the major bloom occurred in September. The analysis of diversity indices shows that the community is very stable. The dominant species of zooplankton were protozoan Noctiluca scintillans and copepods. A total of 83 species of marine algae were identified. The algal community was more diverse in September-December than in March-July, and the dominant species were Chondria crassicaulis and Corallina pilulifera. Total algal production per unit area (0.25 m 2 ) was, on the average, 20 g-dry. The biomass of bacterial population was highest in December, and the result of multiple regression analysis indicates that the important environmental factors are nutrients, salinity and temperature. Primary productivities measured by Carbon-14 method were 1.11 mg C/m 3 /hr at 1 m depth, and 1.45 mg C/m 3 /hr at 6 m depth. As a whole the marine ecosystems adjacent Wolseong NPP site are thought to be stable. (author)

Reduction of environmental and energy footprint of microalgal biodiesel production through material and energy integration.

Science.gov (United States)

Chowdhury, Raja; Viamajala, Sridhar; Gerlach, Robin

2012-03-01

The life cycle impacts were assessed for an integrated microalgal biodiesel production system that facilitates energy- and nutrient- recovery through anaerobic digestion, and utilizes glycerol generated within the facility for additional heterotrophic biodiesel production. Results show that when external fossil energy inputs are lowered through process integration, the energy demand, global warming potential (GWP), and process water demand decrease significantly and become less sensitive to algal lipid content. When substitution allocation is used to assign additional credit for avoidance of fossil energy use (through utilization of recycled nutrients and biogas), GWP and water demand can, in fact, increase with increase in lipid content. Relative to stand-alone algal biofuel facilities, energy demand can be lowered by 3-14 GJ per ton of biodiesel through process integration. GWP of biodiesel from the integrated system can be lowered by up to 71% compared to petroleum fuel. Evaporative water loss was the primary water demand driver. Copyright © 2011 Elsevier Ltd. All rights reserved.

Informatics and Decisions support in Galway Bay (SmartBay) using ERDDAP, OGC Technologies and Third Party Data Sources to Provide Services to the Marine Community.

Science.gov (United States)

Delaney, Conor; Gaughan, Paul; Smyth, Damian

2013-04-01

of Galway Bay, Ireland. The architecture of the MAST is based on the concepts of Representational State Transfer (REST), Resource Orientated Architecture (ROA), Service Orientated Architecture (SOA), OpenData and MASHUPS. In this paper we demonstrate the architecture of the MAST system and discuss the potential of ERDDAP technology to serve complex data in formats that are accessible to the general developer community. We also discuss of the potential of next generation web technologies and OpenData to encourage the use of valuable marine data resources.

Adaptation of Australia’s Marine Ecosystems to Climate Change: Using Science to Inform Conservation Management

Directory of Open Access Journals (Sweden)

Johanna E. Johnson

2014-01-01

Full Text Available The challenges that climate change poses for marine ecosystems are already manifesting in impacts at the species, population, and community levels in Australia, particularly in Tasmania and tropical northern Australia. Many species and habitats are already under threat as a result of human activities, and the additional pressure from climate change significantly increases the challenge for marine conservation and management. Climate change impacts are expected to magnify as sea surface temperatures, ocean chemistry, ocean circulation, sea level, rainfall, and storm patterns continue to change this century. In particular, keystone species that form the foundation of marine habitats, such as coral reefs, kelp beds, and temperate rocky reefs, are projected to pass thresholds with subsequent implications for communities and ecosystems. This review synthesises recent science in this field: the observed impacts and responses of marine ecosystems to climate change, ecological thresholds of change, and strategies for marine conservation to promote adaptation. Increasing observations of climate-related impacts on Australia’s marine ecosystems—both temperate and tropical—are making adaptive management more important than ever before. Our increased understanding of the impacts and responses of marine ecosystems to climate change provides a focus for “no-regrets” adaptations that can be implemented now and refined as knowledge improves.

Establishing an agenda for social studies research in marine renewable energy

International Nuclear Information System (INIS)

Kerr, Sandy; Watts, Laura; Colton, John; Conway, Flaxen; Hull, Angela; Johnson, Kate; Jude, Simon; Kannen, Andreas; MacDougall, Shelley; McLachlan, Carly; Potts, Tavis; Vergunst, Jo

2014-01-01

To date, academic research relating to Marine Renewable Energy (MRE) has largely focused on resource assessment, technical viability and environmental impact. Experiences from onshore renewable energy tell us that social acceptability is equally critical to project success. However, the specific nature of the marine environment, patterns of resource distribution and governance means experiences from onshore may not be directly applicable to MRE and the marine environment. This paper sets out an agenda for social studies research linked to MRE, identifying key topics for future research: (i) economic impacts; (ii) wealth distribution and community benefits; (iii) communication and knowledge flow; (iv) consultation processes; (v) dealing with uncertainty; (vi) public attitudes; and (vii) planning processes. This agenda is based on the findings of the first workshop of ISSMER, an international research network of social scientists with interests in marine renewable energy. Importantly, this research agenda has been informed by the experiences of developers, regulators and community groups in Orkney. The Orkney archipelago, off the north coast of Scotland, is home to the most intense cluster of MRE research, development and deployment activity in the world today. - Highlights: • Existing marine renewable energy (MRE) research fails to address many social issues. • Social acceptability is essential to the future viability of the MRE industry. • An agenda is established for social science research into MRE

Marine Research Infrastructure collaboration in the COOPLUS project framework - Promoting synergies for marine ecosystems studies

Science.gov (United States)

Beranzoli, L.; Best, M.; Embriaco, D.; Favali, P.; Juniper, K.; Lo Bue, N.; Lara-Lopez, A.; Materia, P.; Ó Conchubhair, D.; O'Rourke, E.; Proctor, R.; Weller, R. A.

2017-12-01

Understanding effects on marine ecosystems of multiple drivers at various scales; from regional such as climate and ocean circulation, to local, such as seafloor gas emissions and harmful underwater noise, requires long time-series of integrated and standardised datasets. Large-scale research infrastructures for ocean observation are able to provide such time-series for a variety of ocean process physical parameters (mass and energy exchanges among surface, water column and benthic boundary layer) that constitute important and necessary measures of environmental conditions and change/development over time. Information deduced from these data is essential for the study, modelling and prediction of marine ecosystems changes and can reveal and potentially confirm deterioration and threats. The COOPLUS European Commission project brings together research infrastructures with the aim of coordinating multilateral cooperation among RIs and identifying common priorities, actions, instruments, resources. COOPLUS will produce a Strategic Research and Innovation Agenda (SRIA) which will be a shared roadmap for mid to long-term collaboration. In particular, marine RIs collaborating in COOPLUS, namely the European Multidisciplinary Seafloor and water column Observatory: EMSO (Europe), the Ocean Observatories Initiative (OOI, USA), Ocean Networks Canada (ONC), and the Integrated Marine Observing System (IMOS, Australia), can represent a source of important data for researchers of marine ecosystems. The RIs can then, in turn, receive suggestions from researchers for implementing new measurements and stimulating cross-cutting collaborations and data integration and standardisation from their user community. This poster provides a description of EMSO, OOI, ONC and IMOS for the benefit of marine ecosystem studies and presents examples of where the analyses of time-series have revealed noteworthy environmental conditions, temporal trends and events.

The Role of B Vitamins in Marine Biogeochemistry

Science.gov (United States)

Sañudo-Wilhelmy, Sergio A.; Gómez-Consarnau, Laura; Suffridge, Christopher; Webb, Eric A.

2014-01-01

The soluble B vitamins (B1, B7, and B12) have long been recognized as playing a central metabolic role in marine phytoplankton and bacteria; however, the importance of these organic external metabolites in marine ecology has been largely disregarded, as most research has focused on inorganic nutrients and trace metals. Using recently available genomic data combined with culture-based surveys of vitamin auxotrophy (i.e., vitamin requirements), we show that this auxotrophy is widespread in the marine environment and occurs in both autotrophs and heterotrophs residing in oligotrophic and eutrophic environments. Our analysis shows that vitamins originate from the activities of some bacteria and algae and that taxonomic changes observed in marine phytoplankton communities could be the result of their specific vitamin requirements and/or vitamin availability. Dissolved vitamin concentration measurements show that large areas of the world ocean are devoid of B vitamins, suggesting that vitamin limitation could be important for the efficiency of carbon and nitrogen fixation in those regions.

Interactions between marine snow and heterotrophic bacteria: aggregate formation and microbial dynamics

DEFF Research Database (Denmark)

Grossart, H.P.; Kiørboe, Thomas; Tang, K.W.

2006-01-01

as well as abundance, colonization behaviour, and community composition of bacteria during the growth of 2 marine diatoms (Thalassiosira weissflogii and Navicula sp.) under axenic and non-axenic conditions. Community composition of free-living and attached bacteria during phytoplankton growth...... and aggregation was studied by amplification of 16S rRNA gene fragments and denaturing gradient gel electrophoresis (DGGE). Our results show that the presence of bacteria was a prerequisite for aggregation of T. weissflogii but not of Navicula sp. Occurrences of distinct populations of free-living and attached...... bacteria depended on phytoplankton growth and aggregation dynamics. The community composition of especially attached bacteria significantly differed between the 2 algal cultures. Our study suggests that phytoplankton aggregation and vertical fluxes are closely linked to interactions between the marine...

The Impact of Global Warming and Anoxia on Marine Benthic Community Dynamics: an Example from the Toarcian (Early Jurassic)

Science.gov (United States)

Danise, Silvia; Twitchett, Richard J.; Little, Crispin T. S.; Clémence, Marie-Emilie

2013-01-01

The Pliensbachian-Toarcian (Early Jurassic) fossil record is an archive of natural data of benthic community response to global warming and marine long-term hypoxia and anoxia. In the early Toarcian mean temperatures increased by the same order of magnitude as that predicted for the near future; laminated, organic-rich, black shales were deposited in many shallow water epicontinental basins; and a biotic crisis occurred in the marine realm, with the extinction of approximately 5% of families and 26% of genera. High-resolution quantitative abundance data of benthic invertebrates were collected from the Cleveland Basin (North Yorkshire, UK), and analysed with multivariate statistical methods to detect how the fauna responded to environmental changes during the early Toarcian. Twelve biofacies were identified. Their changes through time closely resemble the pattern of faunal degradation and recovery observed in modern habitats affected by anoxia. All four successional stages of community structure recorded in modern studies are recognised in the fossil data (i.e. Stage III: climax; II: transitional; I: pioneer; 0: highly disturbed). Two main faunal turnover events occurred: (i) at the onset of anoxia, with the extinction of most benthic species and the survival of a few adapted to thrive in low-oxygen conditions (Stages I to 0) and (ii) in the recovery, when newly evolved species colonized the re-oxygenated soft sediments and the path of recovery did not retrace of pattern of ecological degradation (Stages I to II). The ordination of samples coupled with sedimentological and palaeotemperature proxy data indicate that the onset of anoxia and the extinction horizon coincide with both a rise in temperature and sea level. Our study of how faunal associations co-vary with long and short term sea level and temperature changes has implications for predicting the long-term effects of “dead zones” in modern oceans. PMID:23457537

Chemical ecology of the marine plankton.

Science.gov (United States)

Roy, Jessie S; Poulson-Ellestad, Kelsey L; Drew Sieg, R; Poulin, Remington X; Kubanek, Julia

2013-10-11

This review summarizes recent work in the chemical ecology of pelagic marine ecosystems. In order to provide a comprehensive overview of advances in the field over the period covered, we have organized this review by ecological interaction type beginning with intraspecific interactions, then interspecific interactions (including mutualism, parasitism, competition, and predation), and finally community- and ecosystem-wide interactions.

Status of Coral Reef Fish Communities within the Mombasa Marine ...

African Journals Online (AJOL)

The abundance, trophic composition and diversity of fish were investigated in the Mombasa Marine Protected Area (MPA) on the Kenya coast over a period of four years (2004-2007) sixteen years after its establishment to determine its effectiveness. Fish monitoring data collected using belt transects revealed significant ...

Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine Arctic sediments

DEFF Research Database (Denmark)

Ravenschlag, K.; Sahm, K.; Knoblauch, C.

2000-01-01

The community structure of sulfate-reducing bacteria (SRB) of a marine Arctic sediment (Smeerenburg-fjorden, Svalbard) a-as characterized by both fluorescence in situ hybridization (FISH) and rRNA slot blot hybridization by using group- and genus-specific 16S rRNA-targeted oligonucleotide probes...... that FISH and rRNA slot blot hybridization gave comparable results. Furthermore, a combination of the two methods allowed us to calculate specific cellular rRNA contents with respect to localization in the sediment profile. The rRNA contents of Desulfosarcina-Desulfococcus cells were highest in the first 5...... mm of the sediment (0.9 and 1.4 fg, respectively) and decreased steeply with depth, indicating that maximal metabolic activity occurred close to the surface, Based on SRB cell numbers, cellular sulfate reduction rates were calculated. The rates were highest in the surface layer (0.14 fmol cell(-1...

The Multiplier Effect of the Gandoriah Beach Marine Tourism to the Coastal Community of Kelurahan Pasir, Central Pariaman District, Pariaman City West Sumatra Province

OpenAIRE

Mazidah, Nurnaini; Nugroho, Firman; Bathara, Lamun

2016-01-01

This research was conducted on March 25, 2016 until 11 April 2016 which is placed in Gandoriah Beach, Kelurahan Pasir, Central Pariaman District, Pariaman City West Sumatra Province. This study aims to identify economic activities and socio-cultural as the impact of the presence of marine tourism and determine the impact of tourism activities on the beach Gandoriah to the economy of coastal communities. The method used in this research is survey method. There are 64 respondents, that consist ...

Genomic Approaches in Marine Biodiversity and Aquaculture

Directory of Open Access Journals (Sweden)

Jorge A Huete-Pérez

2013-01-01

Full Text Available Recent advances in genomic and post-genomic technologies have now established the new standard in medical and biotechnological research. The introduction of next-generation sequencing, NGS,has resulted in the generation of thousands of genomes from all domains of life, including the genomes of complex uncultured microbial communities revealed through metagenomics. Although the application of genomics to marine biodiversity remains poorly developed overall, some noteworthy progress has been made in recent years. The genomes of various model marine organisms have been published and a few more are underway. In addition, the recent large-scale analysis of marine microbes, along with transcriptomic and proteomic approaches to the study of teleost fishes, mollusks and crustaceans, to mention a few, has provided a better understanding of phenotypic variability and functional genomics. The past few years have also seen advances in applications relevant to marine aquaculture and fisheries. In this review we introduce several examples of recent discoveries and progress made towards engendering genomic resources aimed at enhancing our understanding of marine biodiversity and promoting the development of aquaculture. Finally, we discuss the need for auspicious science policies to address challenges confronting smaller nations in the appropriate oversight of this growing domain as they strive to guarantee food security and conservation of their natural resources.

Parasite communities: patterns and processes

National Research Council Canada - National Science Library

Esch, Gerald W; Bush, Albert O; Aho, John M

1990-01-01

.... Taking examples from many hosts including molluscs, marine and freshwater fish, amphibians, reptiles, birds and mammals, this book shows how parasitic communities are influenced by a multitude...

Early detection of protozoan grazers in algal biofuel cultures.

Science.gov (United States)

Day, John G; Thomas, Naomi J; Achilles-Day, Undine E M; Leakey, Raymond J G

2012-06-01

Future micro-algal biofuels will most likely be derived from open-pond production systems. These are by definition open to "invasion" by grazers, which could devastate micro-algal mass-cultures. There is an urgent requirement for methodologies capable of early detection and control of grazers in dense algal cultures. In this study a model system employing the marine alga Nannochloropsis oculata was challenged by grazers including ciliates, amoebae and a heterotrophic dinoflagellate. A FlowCAM flow-cytometer was used to detect all grazers investigated (size range 80 μm in length) in the presence of algae. Detection limits were 1.4 × 10(8) cells ml(-1) (>0.5 g l(-1) dry wt.). Copyright © 2012 Elsevier Ltd. All rights reserved.

Towards a network of locally managed marine areas (LMMAs in the Western Indian Ocean.

Directory of Open Access Journals (Sweden)

Steve Rocliffe

Full Text Available In the Western Indian Ocean (WIO, local communities are increasingly assuming responsibility for inshore marine resources either on their own or through collaborative management arrangements with governments or non-state actors. In this paper, we trace the evolution and expansion of community management in the WIO and present the first ever inventory and assessment of the region's locally managed marine areas (LMMAs. We compare the key attributes of these areas to those under government stewardship and assess their relative contributions to progress towards the Convention on Biodiversity (CBD target of 10% of marine and coastal ecological regions to be effectively conserved by 2020. We also explore the legal frameworks that underpin locally managed marine initiatives in Kenya, Madagascar, Mozambique and Tanzania to assess the potential for future expansion. A principal finding is that whilst LMMAs protect more than 11,000 square kilometres of marine resource in the WIO, they are hampered by underdeveloped local and national legal structures and enforcement mechanisms. In our recommendations to improve local management, we suggest establishing a network of LMMA practitioners in the WIO region to share experiences and best practice.

Rapid assessment of visual impairment (RAVI in marine fishing communities in South India - study protocol and main findings

Directory of Open Access Journals (Sweden)

Madala Sreenivas R

2011-09-01

Full Text Available Abstract Background Reliable data are a pre-requisite for planning eye care services. Though conventional cross sectional studies provide reliable information, they are resource intensive. A novel rapid assessment method was used to investigate the prevalence and causes of visual impairment and presbyopia in subjects aged 40 years and older. This paper describes the detailed methodology and study procedures of Rapid Assessment of Visual Impairment (RAVI project. Methods A population-based cross-sectional study was conducted using cluster random sampling in the coastal region of Prakasam district of Andhra Pradesh in India, predominantly inhabited by fishing communities. Unaided, aided and pinhole visual acuity (VA was assessed using a Snellen chart at a distance of 6 meters. The VA was re-assessed using a pinhole, if VA was Results The data collection was completed in Conclusion There is a high prevalence of visual impairment in marine fishing communities in Prakasam district in India. The data from this rapid assessment survey can now be used as a baseline to start eye care services in this region. The rapid assessment methodology (RAVI reported in this paper is robust, quick and has the potential to be replicated in other areas.

Accounting for tourism benefits in marine reserve design

Science.gov (United States)

2017-01-01

Marine reserve design often considers potential benefits to conservation and/or fisheries but typically ignores potential revenues generated through tourism. Since tourism can be the main source of economic benefits for many marine reserves worldwide, ignoring tourism objectives in the design process might lead to sub-optimal outcomes. To incorporate tourism benefits into marine reserve design, we develop a bioeconomic model that tracks tourism and fisheries revenues through time for different management options and location characteristics. Results from the model show that accounting for tourism benefits will ultimately motivate greater ocean protection. Our findings demonstrate that marine reserves are part of the optimal economic solution even in situations with optimal fisheries management and low tourism value relative to fisheries. The extent of optimal protection depends on specific location characteristics, such as tourism potential and other local amenities, and the species recreational divers care about. Additionally, as tourism value increases, optimal reserve area also increases. Finally, we demonstrate how tradeoffs between the two services depend on location attributes and management of the fishery outside marine reserve borders. Understanding when unavoidable tradeoffs will arise helps identify those situations where communities must choose between competing interests. PMID:29267364

Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding.

Directory of Open Access Journals (Sweden)

Elizabeth A Andruszkiewicz

Full Text Available Molecular analysis of environmental DNA (eDNA can be used to assess vertebrate biodiversity in aquatic systems, but limited work has applied eDNA technologies to marine waters. Further, there is limited understanding of the spatial distribution of vertebrate eDNA in marine waters. Here, we use an eDNA metabarcoding approach to target and amplify a hypervariable region of the mitochondrial 12S rRNA gene to characterize vertebrate communities at 10 oceanographic stations spanning 45 km within the Monterey Bay National Marine Sanctuary (MBNMS. In this study, we collected three biological replicates of small volume water samples (1 L at 2 depths at each of the 10 stations. We amplified fish mitochondrial DNA using a universal primer set. We obtained 5,644,299 high quality Illumina sequence reads from the environmental samples. The sequence reads were annotated to the lowest taxonomic assignment using a bioinformatics pipeline. The eDNA survey identified, to the lowest taxonomic rank, 7 families, 3 subfamilies, 10 genera, and 72 species of vertebrates at the study sites. These 92 distinct taxa come from 33 unique marine vertebrate families. We observed significantly different vertebrate community composition between sampling depths (0 m and 20/40 m deep across all stations and significantly different communities at stations located on the continental shelf (200 m bottom depth. All but 1 family identified using eDNA metabarcoding is known to occur in MBNMS. The study informs the implementation of eDNA metabarcoding for vertebrate biomonitoring.

Taxonomic and Functional Microbial Signatures of the Endemic Marine Sponge Arenosclera brasiliensis

Science.gov (United States)

Trindade-Silva, Amaro E.; Rua, Cintia; Silva, Genivaldo G. Z.; Dutilh, Bas E.; Moreira, Ana Paula B.; Edwards, Robert A.; Hajdu, Eduardo; Lobo-Hajdu, Gisele; Vasconcelos, Ana Tereza; Berlinck, Roberto G. S.; Thompson, Fabiano L.

2012-01-01

The endemic marine sponge Arenosclera brasiliensis (Porifera, Demospongiae, Haplosclerida) is a known source of secondary metabolites such as arenosclerins A-C. In the present study, we established the composition of the A. brasiliensis microbiome and the metabolic pathways associated with this community. We used 454 shotgun pyrosequencing to generate approximately 640,000 high-quality sponge-derived sequences (∼150 Mb). Clustering analysis including sponge, seawater and twenty-three other metagenomes derived from marine animal microbiomes shows that A. brasiliensis contains a specific microbiome. Fourteen bacterial phyla (including Proteobacteria, Cyanobacteria, Actinobacteria, Bacteroidetes, Firmicutes and Cloroflexi) were consistently found in the A. brasiliensis metagenomes. The A. brasiliensis microbiome is enriched for Betaproteobacteria (e.g., Burkholderia) and Gammaproteobacteria (e.g., Pseudomonas and Alteromonas) compared with the surrounding planktonic microbial communities. Functional analysis based on Rapid Annotation using Subsystem Technology (RAST) indicated that the A. brasiliensis microbiome is enriched for sequences associated with membrane transport and one-carbon metabolism. In addition, there was an overrepresentation of sequences associated with aerobic and anaerobic metabolism as well as the synthesis and degradation of secondary metabolites. This study represents the first analysis of sponge-associated microbial communities via shotgun pyrosequencing, a strategy commonly applied in similar analyses in other marine invertebrate hosts, such as corals and algae. We demonstrate that A. brasiliensis has a unique microbiome that is distinct from that of the surrounding planktonic microbes and from other marine organisms, indicating a species-specific microbiome. PMID:22768320

Functional responses and scaling in predator-prey interactions of marine fishes: contemporary issues and emerging concepts

NARCIS (Netherlands)

Hunsicker, M.E.; Ciannelli, L.; Bailey, K.M.; Buckel, J.A.; White, J.W.; Link, J.S.; Essington, T.E.; Gaichas, S.; Anderson, T.W.; Brodeur, R.D.; Chan, K.S.; Chen, K.; Englund, G.; Frank, K.T.; Freitas, V.; Hixon, M.A.; Hurst, T.; Johnson, D.W.; Kitchell, J.F.; Reese, D.; Rose, G.A.; Sjodin, H.; Sydeman, W.J.; van der Veer, H.W.; Vollset, K.; Zador, S.

2011-01-01

Predatorprey interactions are a primary structuring force vital to the resilience of marine communities and sustainability of the worlds oceans. Human influences on marine ecosystems mediate changes in species interactions. This generality is evinced by the cascading effects of overharvesting top

Microbial metatranscriptomics in a permanent marine oxygen minimum zone

OpenAIRE

Stewart, Frank J.; Ulloa, Osvaldo; DeLong, Edward

2010-01-01

Simultaneous characterization of taxonomic composition, metabolic gene content and gene expression in marine oxygen minimum zones (OMZs) has potential to broaden perspectives on the microbial and biogeochemical dynamics in these environments. Here, we present a metatranscriptomic survey of microbial community metabolism in the Eastern Tropical South Pacific OMZ off northern Chile. Community RNA was sampled in late austral autumn from four depths (50, 85, 110, 200 m) extending across the oxycl...

A General Business Model for Marine Reserves

Science.gov (United States)

Sala, Enric; Costello, Christopher; Dougherty, Dawn; Heal, Geoffrey; Kelleher, Kieran; Murray, Jason H.; Rosenberg, Andrew A.; Sumaila, Rashid

2013-01-01

Marine reserves are an effective tool for protecting biodiversity locally, with potential economic benefits including enhancement of local fisheries, increased tourism, and maintenance of ecosystem services. However, fishing communities often fear short-term income losses associated with closures, and thus may oppose marine reserves. Here we review empirical data and develop bioeconomic models to show that the value of marine reserves (enhanced adjacent fishing + tourism) may often exceed the pre-reserve value, and that economic benefits can offset the costs in as little as five years. These results suggest the need for a new business model for creating and managing reserves, which could pay for themselves and turn a profit for stakeholder groups. Our model could be expanded to include ecosystem services and other benefits, and it provides a general framework to estimate costs and benefits of reserves and to develop such business models. PMID:23573192

Functional responses and scaling in predator-prey interactions of marine fishes: contemporary issues and emerging concepts.

Science.gov (United States)

Hunsicker, Mary E; Ciannelli, Lorenzo; Bailey, Kevin M; Buckel, Jeffrey A; Wilson White, J; Link, Jason S; Essington, Timothy E; Gaichas, Sarah; Anderson, Todd W; Brodeur, Richard D; Chan, Kung-Sik; Chen, Kun; Englund, Göran; Frank, Kenneth T; Freitas, Vânia; Hixon, Mark A; Hurst, Thomas; Johnson, Darren W; Kitchell, James F; Reese, Doug; Rose, George A; Sjodin, Henrik; Sydeman, William J; van der Veer, Henk W; Vollset, Knut; Zador, Stephani

2011-12-01

Predator-prey interactions are a primary structuring force vital to the resilience of marine communities and sustainability of the world's oceans. Human influences on marine ecosystems mediate changes in species interactions. This generality is evinced by the cascading effects of overharvesting top predators on the structure and function of marine ecosystems. It follows that ecological forecasting, ecosystem management, and marine spatial planning require a better understanding of food web relationships. Characterising and scaling predator-prey interactions for use in tactical and strategic tools (i.e. multi-species management and ecosystem models) are paramount in this effort. Here, we explore what issues are involved and must be considered to advance the use of predator-prey theory in the context of marine fisheries science. We address pertinent contemporary ecological issues including (1) the approaches and complexities of evaluating predator responses in marine systems; (2) the 'scaling up' of predator-prey interactions to the population, community, and ecosystem level; (3) the role of predator-prey theory in contemporary fisheries and ecosystem modelling approaches; and (4) directions for the future. Our intent is to point out needed research directions that will improve our understanding of predator-prey interactions in the context of the sustainable marine fisheries and ecosystem management. 2011 Blackwell Publishing Ltd/CNRS.

Marine protected areas (MPAs) are expected to play a more ...

African Journals Online (AJOL)

spamer

MPAs are playing an important role in fisheries management. Community ..... and marine management falls under two of the Chief ... ment service, but enforcement officers are not dedicated to MPAs. ...... Financial rewards encourage illegal.

Nitrogen and phosphorus treatment of marine wastewater by a laboratory-scale sequencing batch reactor with eco-friendly marine high-efficiency sediment.

Science.gov (United States)

Cho, Seonghyeon; Kim, Jinsoo; Kim, Sungchul; Lee, Sang-Seob

2017-06-22

We screened and identified a NH 3 -N-removing bacterial strain, Bacillus sp. KGN1, and a [Formula: see text] removing strain, Vibrio sp. KGP1, from 960 indigenous marine isolates from seawater and marine sediment from Tongyeong, South Korea. We developed eco-friendly high-efficiency marine sludge (eco-HEMS), and inoculated these marine bacterial strains into the marine sediment. A laboratory-scale sequencing batch reactor (SBR) system using the eco-HEMS for marine wastewater from land-based fish farms improved the treatment performance as indicated by 88.2% removal efficiency (RE) of total nitrogen (initial: 5.6 mg/L) and 90.6% RE of total phosphorus (initial: 1.2 mg/L) under the optimal operation conditions (food and microorganism (F/M) ratio, 0.35 g SCOD Cr /g mixed liquor volatile suspended solids (MLVSS)·d; dissolved oxygen (DO) 1.0 ± 0.2 mg/L; hydraulic retention time (HRT), 6.6 h; solids retention time (SRT), 12 d). The following kinetic parameters were obtained: cell yield (Y), 0.29 g MLVSS/g SCOD Cr ; specific growth rate (µ), 0.06 d -1 ; specific nitrification rate (SNR), 0.49 mg NH 3 -N/g MLVSS·h; specific denitrification rate (SDNR), 0.005 mg [Formula: see text]/g MLVSS·h; specific phosphorus uptake rate (SPUR), 0.12 mg [Formula: see text]/g MLVSS·h. The nitrogen- and phosphorus-removing bacterial strains comprised 18.4% of distribution rate in the microbial community of eco-HEMS under the optimal operation conditions. Therefore, eco-HEMS effectively removed nitrogen and phosphorus from highly saline marine wastewater from land-based fish farms with improving SNR, SDNR, and SPUR values in more diverse microbial communities. DO: dissolved oxygen; Eco-HEMS: eco-friendly high efficiency marine sludge; F/M: food and microorganism ratio; HRT: hydraulic retention time; ML(V)SS: mixed liquor (volatile) suspended solids; NCBI: National Center for Biotechnology Information; ND: not determined; qPCR: quantitative real-time polymerase

Using the marine unicellular algae in biological monitoring

Directory of Open Access Journals (Sweden)

Kapkov V. I.

2017-06-01

Full Text Available The possibility of using marine unicellular algae from natural plankton community in biomonitoring of pollution by heavy metals has been investigated. Algae of different taxa from the Mediterranean Sea have been allocated to culture. In the laboratory the culture conditions – i. e. growth medium, temperature, photoperiod, level of artificial light and initial density – have been selected for every species. The impact of heavy metals (Hg, Cd, Cu, Pb in the form of chloride salts on the growth of axenic algae culture has been studied in the modelling experiments. The unicellular marine algae have a very short life cycle, therefore it is possible to use them in the experiments of studying the effect of anthropogenic factors at cellular and population levels on the test-object. With biomonitoring pollution of marine environment by heavy metals and others dangerous toxicants, the major indicators of algae community condition are the cellular cycle and the condition of the photosynthetic apparatus of the cell. The subsequent lysis of cells under the influence of heavy metals leads to the excretion of secondary metabolites which can essentially affect the metal toxicity. The established scales of threshold and lethal concentration of heavy metals for algae of different taxon make it possible to use the ratio of sensitive and resistant species to heavy metals as biological markers when forecasting ecological consequences of pollution of the marine environment by heavy metals. Distinctions in the resistance of different taxon to heavy metals can result in implementing the strategy of selection of test-objects depending on the purposes of the research.

Towards a common effort in mapping marine geohazard features in the Mediterranean Sea. An unavoidable tool for the "blue growth" and marine spatial planning.

Science.gov (United States)

Chiocci, F. L.; Gorini, C.; Ercilla, G.; Sakellariou, D.; Casalbore, D.; Ridente, D.

2017-12-01

46,000 km of densely settled coastlines characterise the Mediterranean Sea. The region connects three continents, where the population doubled in the last 20 years, and among which, trade, maritime transports and migratory fluxes have been increasing. Moreover, the Mediterranean is by far the world's largest tourist destination, attracting almost a third of international tourists and generating more than a quarter of tourism-related revenues worldwide. The Mediterranean area lays in a plate boundary zone highly active in terms of seismicity, volcanism and submarine geological processes that over recent time have repeatedly demonstrated to be able to generate catastrophic events.. As an example 98 tsunamis where recorded in the Mediterranean on historical times (on average one every century). This census do not encompasses small events, such as minor tsunamis generated by submarine landslides that can produce serious damage in the near field. In Stromboli volcanic island (Southern Tyrrhenian Sea) for instance, the frequency of such events accounts for 5 events over the last century Mapping the seafloor for geohazard assessment becomes, therefore, especially important for the sustainable development of the marine and coastal areas both economically and socially. The increasing amount of high resolution seafloor mapping data allows defining geohazard features such as volcanic vents, active faults, submarine landslide, canyon head migrating bedforms fluid expulsion structure with a detail able to highlight even locally dangerous situations. If the marine geoscience community will be able to build common standards to interpret and cartographically represent the marine geohazard features private industries and public agencies will benefit of an unvaluable tool which will help in better exploit the marine resource and/or preserve the marine and coastal environment. This contribution will present spectacular examples of marine geohazards from the Mediterranean Seas; the

Extraction of Total DNA and RNA from Marine Filter Samples and Generation of a cDNA as Universal Template for Marker Gene Studies.

Science.gov (United States)

Schneider, Dominik; Wemheuer, Franziska; Pfeiffer, Birgit; Wemheuer, Bernd

2017-01-01

Microbial communities play an important role in marine ecosystem processes. Although the number of studies targeting marker genes such as the 16S rRNA gene has been increased in the last few years, the vast majority of marine diversity is rather unexplored. Moreover, most studies focused on the entire bacterial community and thus disregarded active microbial community players. Here, we describe a detailed protocol for the simultaneous extraction of DNA and RNA from marine water samples and for the generation of cDNA from the isolated RNA which can be used as a universal template in various marker gene studies.

Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park

Science.gov (United States)

Sim, Vivian X. Y.; Dafforn, Katherine A.; Simpson, Stuart L.; Kelaher, Brendan P.; Johnston, Emma L.

2015-01-01

Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ) where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina) in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management. PMID:26086427

Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park.

Science.gov (United States)

Sim, Vivian X Y; Dafforn, Katherine A; Simpson, Stuart L; Kelaher, Brendan P; Johnston, Emma L

2015-01-01

Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ) where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina) in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management.

Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park.

Directory of Open Access Journals (Sweden)

Vivian X Y Sim

Full Text Available Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management.

Leatherback sea turtle stewardship to attain local, regional, and global marine conservation and management

Science.gov (United States)

Randall Arauz; Todd Steiner

2007-01-01

The leatherback sea turtle (Dermochelys coriacea) is the largest marine reptile with one of the longest known ocean migrations in the world and an important part of marine biodiversity. It is also important to the economies of coastal communities in developing countries, especially in areas where eco-tourism has replaced unsustainable harvest and...

Remote sensing in the marine environment. A description of facilities, applications, needs and opportunities in South Africa

CSIR Research Space (South Africa)

Shannon, LV

1988-01-01

Full Text Available Against a background of the techniques and instrumentation available for remote sensing in the marine environment, this report considers the rationale for their use by the South African marine community. Local applications of remote sensing...

Behind Waterlust - Bringing marine science, sport and art together

Science.gov (United States)

Rynne, P.; Graham, F.

2013-12-01

In today's economic climate, it has become increasingly important for scientists to demonstrate the relevance, societal impact, and value of their work. Combined with this financial driver is the inherent human desire to be creative, a characteristic that is often times suppressed when following the scientific method. Created by three marine science graduate students from the Rosenstiel School of Marine and Atmospheric Science at the University of Miami, Waterlust is an experiment to demonstrate that the pursuit of creative outlets that engage the general public is both valuable and rewarding for the scientific community.

Habitat damage, marine reserves, and the value of spatial management

KAUST Repository

Moeller, Holly V.; Neubert, Michael G.

2013-01-01

The biological benefits of marine reserves have garnered favor in the conservation community, but "no-take" reserve implementation is complicated by the economic interests of fishery stakeholders. There are now a number of studies examining

Application of Fungicides and Microalgal Phenolic Extracts for the Direct Control of Fumonisin Contamination in Maize.

Science.gov (United States)

Scaglioni, Priscila Tessmer; Blandino, Massimo; Scarpino, Valentina; Giordano, Debora; Testa, Giulio; Badiale-Furlong, Eliana

2018-05-16

Fungicides and, for the first time, microalgal phenolic extracts (MPE) from Spirulina sp. and Nannochloropsis sp. were applied on maize culture media under field conditions to evaluate their ability to minimize Fusarium species development and fumonisin production. An in vitro assay against F. verticillioides was carried out using maize grains as the culture medium. An open-field experiment was carried out in Northwest Italy under natural infection conditions. The compared treatments were factorial combinations of two insecticide treatments (an untreated control and pyrethroid, used against European Corn Borer), four antifungal treatments (an untreated control, MPE from Spirulina sp., MPE from Nannochloropsis sp., and a synthetic fungicide), and two timings of the application of the antifungal compounds (at maize flowering and at the milk stage). The MPE compounds were capable of inhibiting fumonisin production in vitro more efficiently than tebuconazole. Insecticide application reduced the infection by Fusarium species and subsequent fumonisin contamination. However, fumonisins in maize fields were not significantly controlled by either fungicide or MPE application.

Microfouling communities from pelagic and benthic marine plastic debris sampled across Mediterranean coastal waters

Directory of Open Access Journals (Sweden)

Mercedes Masó

2016-09-01

Full Text Available The present study used scanning electron microscopy to characterize the organisms colonizing marine plastic debris collected from pelagic and benthic habitats across Mediterranean coastal waters of Greece, Italy and Spain. A total of 42 fragments of plastic were collected during the COMSOM experimental cruise, 16 from the seafloor and 26 from surface waters. The results showed that diatoms were the most abundant organisms on both pelagic and benthic plastics. The diatom Ceratoneis closterium, frequently observed on surface plastics (73%, is a harmful microalgae associated with mucilage events in the Mediterranean. The abundance of marine plastic in coastal and oceanic waters may provide new habitats that offer an easy substrate for these invasive organisms. Furthermore, the colonization of these new environments might reduce the success of life strategies, or drive the organisms out of their essential habitat by dispersion and rafting phenomena. The results of the present work highlight the need to increase our knowledge of the consequences of colonization of plastics introduced into the marine environment, and the need to raise awareness of the potential impacts of debris accumulation on biodiversity of marine ecosystems.

Partitioning of organic production in marine plankton communities

DEFF Research Database (Denmark)

Conan, P.; Søndergaard, Morten; Kragh, T.

2007-01-01

We investigated the partitioning of carbon, nitrogen, and phosphorus between particulate and dissolved production using 11-m(3) marine mesocosms (bags) in a Norwegian fjord with a salinity of 28.3, a chlorophyll concentration of 0.6 mu g L-1, an even biomass among five algal groups, and nitrogen...... between 17 and 58 in the P-replete bags. The C: P ratio of new DOM in the +Si bags was about 300 at all dosing regimes. Consequently, the range in N: P ratios was also large, with values from below 1 to about 30. Carbon-rich DOM in oceans and coastal waters is not necessarily a function of a slow...

Coastal and Marine Environment Problems in East Kalimantan Province

OpenAIRE

Supriharyono

2000-01-01

Coastal and marine problems were collected from the coastal community in area of the Municipality of Balikpapan East Kalimantan Province, from fishermen, NGO's and government officials. The technique used was that of the Field Participatory Workshop's. the result of the study revealed some coastal community awarenees, coastal resources USAge, and governmental policy. The local government's failure to solve those problems was mainly due to lack of social awarenees for environmental coastal man...

Seasonal Variations in the Structure of Phytoplankton Communities near Nuclear Power Plants

International Nuclear Information System (INIS)

Lee, S.-K.; Choi, H.-C.; Moon, H.-T.

2015-01-01

To investigate effects of thermal discharge effluent from nuclear power plants on the surrounding marine environment, especially on the phytoplankton community, environmental data gained by seasonal survey around Hanbit and Hanul nuclear power plants during the periods of 11 years from 1999 to 2009 were analysed. The data used were from environmental survey and assessment around Hanbit and Hanul nuclear power plants of Korea during the period of 11 years from 1999 to 2009. The purposes of this study are (1) to evaluate the effect of operation of nuclear power plants on phytoplankton community, (2) to find out whether the thermal discharge affected negatively phytoplankton community, and (3) to evaluate the difference of thermal discharge influence on phytoplankton community between West and East coastal area, Korea. Through this study, (1) quantitative evaluation of the effect of thermal discharge effluent on marine ecology, especially on abundance and biomass of phytoplankton were performed, (2) found that depending on the season, the effect of thermal discharge effluent from nuclear power plant on the marine environment is not always negative (i.e. warm water may increase or prevent decline of abundance in seasons with low temperature such as winter in Hanbit area), and (3) found that same thermal discharge effluent rate to different marine environments, such as west and east coast of Korea, does not result in same effect on the marine ecosystem. (author)

Establishing an agenda for social studies research in marine renewable energy

DEFF Research Database (Denmark)

Watts, Laura; Kerr, Sandy

2014-01-01

To date, academic research relating to Marine Renewable Energy (MRE) has largely focused on resource assessment, technical viability and environmental impact. Experiences from onshore renewable energy tell us that social acceptability is equally critical to project success. However, the specific...... nature of the marine environment, patterns of resource distribution and governance means experiences from onshore may not be directly applicable to MRE and the marine environment. This paper sets out an agenda for social studies research linked to MRE, identifying key topics for future research: (i...... research network of social scientists with interests in marine renewable energy. Importantly, this research agenda has been informed by the experiences of developers, regulators and community groups in Orkney. The Orkney archipelago, off the north coast of Scotland, is home to the most intense cluster...

Ecosystem productivity is associated with bacterial phylogenetic distance in surface marine waters.

Science.gov (United States)

Galand, Pierre E; Salter, Ian; Kalenitchenko, Dimitri

2015-12-01

Understanding the link between community diversity and ecosystem function is a fundamental aspect of ecology. Systematic losses in biodiversity are widely acknowledged but the impact this may exert on ecosystem functioning remains ambiguous. There is growing evidence of a positive relationship between species richness and ecosystem productivity for terrestrial macro-organisms, but similar links for marine micro-organisms, which help drive global climate, are unclear. Community manipulation experiments show both positive and negative relationships for microbes. These previous studies rely, however, on artificial communities and any links between the full diversity of active bacterial communities in the environment, their phylogenetic relatedness and ecosystem function remain hitherto unexplored. Here, we test the hypothesis that productivity is associated with diversity in the metabolically active fraction of microbial communities. We show in natural assemblages of active bacteria that communities containing more distantly related members were associated with higher bacterial production. The positive phylogenetic diversity-productivity relationship was independent of community diversity calculated as the Shannon index. From our long-term (7-year) survey of surface marine bacterial communities, we also found that similarly, productive communities had greater phylogenetic similarity to each other, further suggesting that the traits of active bacteria are an important predictor of ecosystem productivity. Our findings demonstrate that the evolutionary history of the active fraction of a microbial community is critical for understanding their role in ecosystem functioning. © 2015 John Wiley & Sons Ltd.

Growth, Fatty Acid, and Lipid Composition of Marine Microalgae Skeletonema costatum Available in Bangladesh Coast: Consideration as Biodiesel Feedstock

Directory of Open Access Journals (Sweden)

Tania Sharmin

2016-01-01

Full Text Available Among the various potential sources of renewable energy, biofuels are of most interest. Marine microalgae are the most promising oil sources for making biofuels, which can grow very rapidly and convert solar energy to chemical energy via CO2 fixation. The fatty acid profile of almost all the microalgal oil is suitable for the synthesis of biofuel. In this research, fatty acid and lipid contents of Bangladeshi strains of marine microalgae Skeletonema costatum were performed. For this, the crude oil was extracted by Soxhlet extraction method, using three most common solvent systems, pure hexane and mixture of CHCl3 : MeOH (2 : 1 and hexane : EtOH (3 : 1 one by one. Highest oil recovery (15.37% came from CHCl3 : MeOH (2 : 1 solvent system from dry biomass whereas the lowest (2.49% came from n-hexane from wet biomass. The qualitative analysis of the extracted oil by GC/MS analysis revealed that it contained significant amount of myristic acid (C14:0, palmitic acid (C16:0, stearic acid (C18:0, and palmitoleic acid (C16:1. It also indicated presence of hexadecatrienoic acid, benzenedicarboxylic acid, oleic acid, arachidonic acid, eicosapentaenoic acid (EPA, 9-Octadecenoic acid methyl ester (C19H36O2, and so forth. The obtained fatty acid profile indicates high potentiality of S. costatum species to be used as promising biofuel feedstock a little improvisation and substantially it can replace diesel in near future.

Incorporating Local Wisdom Sasi into Marine Zoning to Increase the Resilience of a Marine Protected Area Network in Raja Ampat, Indonesia.

Science.gov (United States)

Purwanto, P., Jr.; Mangubhai, S.; Muhajir, M.; Hidayat, N. I.; Rumetna, L.; Awaludinnoer, A.; Thebu, K.

2016-02-01

The Raja Ampat government and local communities established 6 Marine Protected Areas (MPAs) in 2007 to protect the unique marine biodiversity and ensure sustainable fisheries in West Papua, Indonesia. Increasing human populations resulting in overfishing and the use of destructive fishing practices are the main threats and challenges the region faces. Biophysical, socioeconomic and climate change criteria and factors were developed for zoning the Raja Ampat MPA network. Resilience principles such as replication, habitat representation, protection of critical habitat and connectivity were applied to the final zoning design. Reef resilience data using global monitoring protocols were collected to provide insights into the resilience of different reefs to further guide zoning. Resilience rankings showed that fishing pressure on reef fish communities especially on piscivores, herbivores and excavators was the main factor lowering resilience in MPAs. In addition data were collected on `sasi' areas throughout the MPAs. Sasi is a type of traditional resource management practice used by local communities to open and close areas to fishing single or multiple fisheries species. Once the fishery recovers local communities then harvest the species for food or sale. Raja Ampat MPAs network managed as multi-objective zoning system. The current zoning system explicitly recognizes community sasi within Traditional Use Zones, which often are adjacent or close to No-Take Zones. The explicit inclusion of sasi areas within zoning plans for the MPAs will likely lead to good compliance by local communities, and the increase fish biomass. Improving the management of fisheries through the incorporation of traditional fisheries management will therefore increase the overall resilience of coral reefs in the Raja Ampat MPA network.

Anaerobic co-digestion of microalgal biomass and wheat straw with and without thermo-alkaline pretreatment.

Science.gov (United States)

Solé-Bundó, Maria; Eskicioglu, Cigdem; Garfí, Marianna; Carrère, Hélène; Ferrer, Ivet

2017-08-01

This study aimed at analyzing the anaerobic co-digestion of microalgal biomass grown in wastewater and wheat straw. To this end, Biochemical Methane Potential (BMP) tests were carried out testing different substrate proportions (20-80, 50-50 and 80-20%, on a volatile solid basis). In order to improve their biodegradability, the co-digestion of both substrates was also evaluated after applying a thermo-alkaline pretreatment (10% CaO at 75°C for 24h). The highest synergies in degradation rates were observed by adding at least 50% of wheat straw. Therefore, the co-digestion of 50% microalgae - 50% wheat straw was investigated in mesophilic lab-scale reactors. The results showed that the methane yield was increased by 77% with the co-digestion as compared to microalgae mono-digestion, while the pretreatment only increased the methane yield by 15% compared to the untreated mixture. Thus, the anaerobic co-digestion of microalgae and wheat straw was successful even without applying a thermo-alkaline pretreatment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Relationship between the Intracellular Integrity and the Morphology of the Capsular Envelope in Attached and Free-Living Marine Bacteria

OpenAIRE

Heissenberger, A.; Leppard, G. G.; Herndl, G. J.

1996-01-01

The integrity of the intracellular structures and the presence and dimension of the capsular envelope were investigated in marine snow-associated and marine free-living bacteria by transmission electron microscopy and special fixation techniques. Three categories depending on the presence of internal structures were differentiated. In marine snow, 51% of the marine snow-associated bacterial community was considered intact, 26% had a partly degraded internal structure, and 23% were empty with ...

Ocean Data Interoperability Platform (ODIP): developing a common framework for global marine data management

Science.gov (United States)

Glaves, H. M.

2015-12-01

In recent years marine research has become increasingly multidisciplinary in its approach with a corresponding rise in the demand for large quantities of high quality interoperable data as a result. This requirement for easily discoverable and readily available marine data is currently being addressed by a number of regional initiatives with projects such as SeaDataNet in Europe, Rolling Deck to Repository (R2R) in the USA and the Integrated Marine Observing System (IMOS) in Australia, having implemented local infrastructures to facilitate the exchange of standardised marine datasets. However, each of these systems has been developed to address local requirements and created in isolation from those in other regions.Multidisciplinary marine research on a global scale necessitates a common framework for marine data management which is based on existing data systems. The Ocean Data Interoperability Platform project is seeking to address this requirement by bringing together selected regional marine e-infrastructures for the purposes of developing interoperability across them. By identifying the areas of commonality and incompatibility between these data infrastructures, and leveraging the development activities and expertise of these individual systems, three prototype interoperability solutions are being created which demonstrate the effective sharing of marine data and associated metadata across the participating regional data infrastructures as well as with other target international systems such as GEO, COPERNICUS etc.These interoperability solutions combined with agreed best practice and approved standards, form the basis of a common global approach to marine data management which can be adopted by the wider marine research community. To encourage implementation of these interoperability solutions by other regional marine data infrastructures an impact assessment is being conducted to determine both the technical and financial implications of deploying them

Biogeochemical Indicators in High- and Low-Arctic Marine and Terrestrial Avian Community Changes: Comparative Isotopic (13C, 15N, and 34S) Studies in Alaska and Greenland

Science.gov (United States)

Causey, D.; Bargmann, N. A.; Burnham, K. K.; Burnham, J. L.; Padula, V. M.; Johnson, J. A.; Welker, J. M.

2011-12-01

Understanding the complex dynamics of environmental change in northern latitudes is of paramount importance today, given documented rapid shifts in sea ice, plant phenology, temperatures, deglaciation, and habitat fidelity. This knowledge is particularly critical for Arctic avian communities, which are integral components by which biological teleconnections are maintained between the mid and northern latitudes. Furthermore, Arctic birds are fundamental to Native subsistence lifestyles and a focus for conservation activities. Avian communities of marine and terrestrial Arctic environments represent a broad spectrum of trophic levels, from herbivores (eg., geese Chen spp.), planktivores (eg., auklets Aethia spp.), and insectivores (eg., passerines: Wheatears Oenanthe spp., Longspurs Calcarius spp.), to predators of marine invertebrates (eg., eiders Somateria spp.), nearshore and offshore fish (eg., cormorants Phalacrocorax spp, puffins Fratercula spp.), even other bird species (eg., gulls Larus spp., falcons Peregrinus spp.). This diversity of trophic interconnections is an integral factor in the dynamics of Arctic ecosystem ecology, and they are key indicators for the strength and trajectories of change. We are especially interested in their feeding ecology, using stable isotope-diet relations to examine historical diets and to predict future feeding ecology by this range of species. Since 2009, we have been studying the foodweb ecology using stable isotopes (δ13C, δ15N, δ34S) of contemporaneous coastal and marine bird communities in High Arctic (Northwest Greenland) and Low Arctic (western Aleutian Islands, AK). We are quantifying the isotopic values of blood, organ tissues, and feathers, and have carried out comparisons between native and lipid-extracted samples. Although geographically distant, these communities comprise similar taxonomic and ecological congeners, including several species common to both (eg., Common Eider, Black-legged Kittiwake, Northern

ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services.

Science.gov (United States)

Robertsen, Espen Mikal; Denise, Hubert; Mitchell, Alex; Finn, Robert D; Bongo, Lars Ailo; Willassen, Nils Peder

2017-01-01

Metagenomics, the study of genetic material recovered directly from environmental samples, has the potential to provide insight into the structure and function of heterogeneous microbial communities.  There has been an increased use of metagenomics to discover and understand the diverse biosynthetic capacities of marine microbes, thereby allowing them to be exploited for industrial, food, and health care products. This ELIXIR pilot action was motivated by the need to establish dedicated data resources and harmonized metagenomics pipelines for the marine domain, in order to enhance the exploration and exploitation of marine genetic resources. In this paper, we summarize some of the results from the ELIXIR pilot action "Marine metagenomics - towards user centric services".

Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.

Directory of Open Access Journals (Sweden)

Caroline Baroukh

2017-06-01

Full Text Available Microalgae are promising microorganisms for the production of numerous molecules of interest, such as pigments, proteins or triglycerides that can be turned into biofuels. Heterotrophic or mixotrophic growth on fermentative wastes represents an interesting approach to achieving higher biomass concentrations, while reducing cost and improving the environmental footprint. Fermentative wastes generally consist of a blend of diverse molecules and it is thus crucial to understand microalgal metabolism in such conditions, where switching between substrates might occur. Metabolic modeling has proven to be an efficient tool for understanding metabolism and guiding the optimization of biomass or target molecule production. Here, we focused on the metabolism of Chlorella sorokiniana growing heterotrophically and mixotrophically on acetate and butyrate. The metabolism was represented by 172 metabolic reactions. The DRUM modeling framework with a mildly relaxed quasi-steady-state assumption was used to account for the switching between substrates and the presence of light. Nine experiments were used to calibrate the model and nine experiments for the validation. The model efficiently predicted the experimental data, including the transient behavior during heterotrophic, autotrophic, mixotrophic and diauxic growth. It shows that an accurate model of metabolism can now be constructed, even in dynamic conditions, with the presence of several carbon substrates. It also opens new perspectives for the heterotrophic and mixotrophic use of microalgae, especially for biofuel production from wastes.

Carbon Stored on Seagrass Community in Marine Nature Tourism Park of Kotania Bay, Western Seram, Indonesia

Directory of Open Access Journals (Sweden)

Mintje Wawo

2014-04-01

Full Text Available Currently, the function of seagrass community as carbon storage has been discussed in line with “blue carbon” function of that seagrass has. Seagrass bed are a very valuable coastal ecosystem, however, seagrass bed is threatened if compared to other coastal ecosystems, such as mangroves and coral reefs. The threatened seagrass experienced also contributes to its capacity in absorbing CO2 emission from greenhouse gasses such as CO2 emission Temporal estimation shows that CO2 emission will increase in the coming decade. On the other side, efforts to decrease climate change can be influenced by the existence of seagrass. Informations about existence of seagrass as carbon storage are still very rare or limited. This study was aimed to estimate carbon storage on seagrass community in Marine Nature Tourism Park of Kotania Bay Area, Western Seram, Maluku Province. The quadrat transect method of 0.25 m2 for each plot was used to collect seagrass existence. The content of carbon in the sample of dry biomass of seagrass was analyzed in the laboratory using Walkley & Black method. The results showed that total carbon stored was higher in both Osi and Burung Islands of Kotania Bay than other studied areas (Buntal and Tatumbu Islands, Marsegu Island, Barnusang Peninsula, Loupessy and Tamanjaya Village. The average carbon stored in Kotania Bay waters was 2.385 Mg C ha-1, whereas the total of carbon stored was 2054.4967 Mg C.

Microbial community changes along the active seepage site of one cold seep in the Red Sea.

KAUST Repository

Cao, Huiluo

2015-07-21

The active seepage of the marine cold seeps could be a critical process for the exchange of energy between the submerged geosphere and the sea floor environment through organic-rich fluids, potentially even affecting surrounding microbial habitats. However, few studies have investigated the associated microbial community changes. In the present study, 16S rRNA genes were pyrosequenced to decipher changes in the microbial communities from the Thuwal seepage point in the Red Sea to nearby marine sediments in the brine pool, normal marine sediments and water, and benthic microbial mats. An unexpected number of reads from unclassified groups were detected in these habitats; however, the ecological functions of these groups remain unresolved. Furthermore, ammonia-oxidizing archaeal community structures were investigated using the ammonia monooxygenase subunit A (amoA) gene. Analysis of amoA showed that planktonic marine habitats, including seeps and marine water, hosted archaeal ammonia oxidizers that differed from those in microbial mats and marine sediments, suggesting modifications of the ammonia oxidizing archaeal (AOA) communities along the environmental gradient from active seepage sites to peripheral areas. Changes in the microbial community structure of AOA in different habitats (water vs. sediment) potentially correlated with changes in salinity and oxygen concentrations. Overall, the present results revealed for the first time unanticipated novel microbial groups and changes in the ammonia-oxidizing archaea in response to environmental gradients near the active seepages of a cold seep.

Microbial community changes along the active seepage site of one cold seep in the Red Sea.

KAUST Repository

Cao, Huiluo; Zhang, Weipeng; Wang, Yong; Qian, Pei-Yuan

2015-01-01

The active seepage of the marine cold seeps could be a critical process for the exchange of energy between the submerged geosphere and the sea floor environment through organic-rich fluids, potentially even affecting surrounding microbial habitats. However, few studies have investigated the associated microbial community changes. In the present study, 16S rRNA genes were pyrosequenced to decipher changes in the microbial communities from the Thuwal seepage point in the Red Sea to nearby marine sediments in the brine pool, normal marine sediments and water, and benthic microbial mats. An unexpected number of reads from unclassified groups were detected in these habitats; however, the ecological functions of these groups remain unresolved. Furthermore, ammonia-oxidizing archaeal community structures were investigated using the ammonia monooxygenase subunit A (amoA) gene. Analysis of amoA showed that planktonic marine habitats, including seeps and marine water, hosted archaeal ammonia oxidizers that differed from those in microbial mats and marine sediments, suggesting modifications of the ammonia oxidizing archaeal (AOA) communities along the environmental gradient from active seepage sites to peripheral areas. Changes in the microbial community structure of AOA in different habitats (water vs. sediment) potentially correlated with changes in salinity and oxygen concentrations. Overall, the present results revealed for the first time unanticipated novel microbial groups and changes in the ammonia-oxidizing archaea in response to environmental gradients near the active seepages of a cold seep.

In vitro populations of rotifer Brachionus plicatilis Müller demonstrate inhibition when fed with copper-preaccumulating microalgae.

Science.gov (United States)

Moreno-Garrido, I; Lubián, L M; Soares, A M

1999-10-01

Four marine microalgal species (Chlorella autotrophyca, Nannochloropsis gaditana, Tetraiselmis chuii, and Isochrysis aff. galbana) were exposed for 24 h to 1 mg L(-1) dissolved copper and then transferred to fresh medium. After that, a group of 10 neonate rotifers were fed with these four microalgal species. The levels of accumulated copper in cellular concentrations of the microalgae were checked, with the result of around 40% of original concentration, with the exception of I. aff. galbana (25% of original concentration). In all cases, cells with preaccumulated metal caused a delay of 1 or 2 days in populational development of rotifers (increase in "lag phase"). The microalgae that were not fed to rotifers (disposed in parallel series) did not significantly transfer metal to the medium after the first day.

Global change and marine communities: Alien species and climate change

International Nuclear Information System (INIS)

Occhipinti-Ambrogi, Anna

2007-01-01

Anthropogenic influences on the biosphere since the advent of the industrial age are increasingly causing global changes. Climatic change and the rising concentration of greenhouse gases in the atmosphere are ranking high in scientific and public agendas, and other components of global change are also frequently addressed, among which are the introductions of non indigenous species (NIS) in biogeographic regions well separated from the donor region, often followed by spectacular invasions. In the marine environment, both climatic change and spread of alien species have been studied extensively; this review is aimed at examining the main responses of ecosystems to climatic change, taking into account the increasing importance of biological invasions. Some general principles on NIS introductions in the marine environment are recalled, such as the importance of propagule pressure and of development stages during the time course of an invasion. Climatic change is known to affect many ecological properties; it interacts also with NIS in many possible ways. Direct (proximate) effects on individuals and populations of altered physical-chemical conditions are distinguished from indirect effects on emergent properties (species distribution, diversity, and production). Climatically driven changes may affect both local dispersal mechanisms, due to the alteration of current patterns, and competitive interactions between NIS and native species, due to the onset of new thermal optima and/or different carbonate chemistry. As well as latitudinal range expansions of species correlated with changing temperature conditions, and effects on species richness and the correlated extinction of native species, some invasions may provoke multiple effects which involve overall ecosystem functioning (material flow between trophic groups, primary production, relative extent of organic material decomposition, extent of benthic-pelagic coupling). Some examples are given, including a special

Assessing the effects of marine protected area (MPA) on a reef fish assemblage in a northwestern Mediterranean marine reserve: Identifying community-based indicators

OpenAIRE

Claudet, Joachim; Pelletier, Dominique; Jouvenel, J.y; Bachet, F; Galzin, R

2006-01-01

Marine protected areas (MPAs) are increasingly envisaged as a tool to manage coastal ecosystems and fisheries. Assessment of their performance with respect to management objectives is therefore important. A number of WAS provided conservation benefits for fished species. Observed benefits do not apply to all species at all times, and responses to protection are also highly variable among fish taxa. Among the many empirical studies on marine reserves, only a few designs considered 'before and ...

Influence of salinity on bacterioplankton communities from the Brazilian rain forest to the coastal Atlantic Ocean.