Analysis of the impact of cryopreservation and theophylline on motility of sperm

Directory of Open Access Journals (Sweden)

Elaheh Gorji

2018-06-01

Full Text Available Objective: Sperm parameters, particularly motility, decrease during cryopreservation. Theophylline generally enhances sperm motility. We analyzed effects of theophylline and freezing on sperm motility.Design: Experimental study.Setting: Private IVF lab.Setting: IVF lab of Mehrgan Hospital. Method: 22–55 year-old men participated in this study (30 fresh ejaculation and 8 TESE samples. After sperm analysis, we added theophylline (40 mM to half of our samples as case group to compare motility with the remaining samples as control group. Cryopreservation was performed in two groups. After thawing, motility of both groups was recorded. Furthermore, theophylline (40 mM was applied to both groups after thawing again. Result: After adding theophylline, sperm motility improved significantly in all samples. Sperm motility reduced in control group more than the study group after freeze-thaw procedure (P < 0.002, normal morphology <5%. Sperm motility was not enhanced significantly by re-adding of theophylline to the two groups. Interactions between stages and groups were statistically significant in semen and biopsy samples (p < 0.001. Conclusion: Adding theophylline before freezing can preserve motility of sperms in samples with different parameters and even sperms extracted in testicular biopsy. Theophylline may have protective impact on sperms in freezing procedure. Keywords: Sperm motility, Theophylline, Freezing, Morphology, Biopsy

Graphene Oxide as a Novel Evenly Continuous Phase Matrix for TOF-SIMS.

Science.gov (United States)

Cai, Lesi; Sheng, Linfeng; Xia, Mengchan; Li, Zhanping; Zhang, Sichun; Zhang, Xinrong; Chen, Hongyuan

2017-03-01

Using matrix to enhance the molecular ion signals for biomolecule identification without loss of spatial resolution caused by matrix crystallization is a great challenge for the application of TOF-SIMS in real-world biological research. In this report, graphene oxide (GO) was used as a matrix for TOF-SIMS to improve the secondary ion yields of intact molecular ions ([M + H] + ). Identifying and distinguishing the molecular ions of lipids (m/z >700) therefore became straightforward. The spatial resolution of TOF-SIMS imaging could also be improved as GO can form a homogeneous layer of matrix instead of crystalline domain, which prevents high spatial resolution in TOF-SIMS imaging. Lipid mapping in presence of GO revealed the delicate morphology and distribution of single vesicles with a diameter of 800 nm. On GO matrix, the vesicles with similar shape but different chemical composition could be distinguished using molecular ions. This novel matrix holds potentials in such applications as the analysis and imaging of complex biological samples by TOF-SIMS. Graphical Abstract ᅟ.

KEY COMPARISONS: Final report: SIM regional comparison of ac-dc voltage transfer difference (SIM.EM.K6a, SIM.EM-K9 and SIM.EM-K11)

Science.gov (United States)

Campos, Sara; Filipski, Piotr; Izquierdo, Daniel; Afonso, Edson; Landim, Régis P.; Di Lillo, Lucas; Lipe, Thomas

2009-01-01

Three comparisons of ac-dc voltage transfer difference held from January to December 2004 are reported. Six NMIs in the SIM region took part: NRC (Canada), NIST (United States of America), CENAM (Mexico), INTI (Argentina), UTE (Uruguay) and INMETRO (Brazil). The comparisons were proposed to assess the measurement capabilities in ac-dc voltage transfer difference of the NMIs in the SIM region. The test points were selected to link the results with the equivalent CCEM Key Comparisons, through three NMIs participating in both SIM and CCEM key comparisons. Additionally, a SIM.EM-Supplementary comparison was proposed, in support of the SIM NMIs' power/energy meter calibration capabilities. One technical protocol and one travelling standard were used, to economize on time and resources. The report shows the degree of equivalence in the SIM region and also the degree of equivalence with the corresponding CCEM reference value. The results of all participants support the values and uncertainties of the applicable CMC entries for ac-dc voltage transfer difference in the Key Comparison Database held at the BIPM. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCEM, according to the provisions of the CIPM Mutual Recognition Arrangement (MRA).

Surface Topography Hinders Bacterial Surface Motility.

Science.gov (United States)

Chang, Yow-Ren; Weeks, Eric R; Ducker, William A

2018-03-21

We demonstrate that the surface motility of the bacterium, Pseudomonas aeruginosa, is hindered by a crystalline hemispherical topography with wavelength in the range of 2-8 μm. The motility was determined by the analysis of time-lapse microscopy images of cells in a flowing growth medium maintained at 37 °C. The net displacement of bacteria over 5 min is much lower on surfaces containing 2-8 μm hemispheres than on flat topography, but displacement on the 1 μm hemispheres is not lower. That is, there is a threshold between 1 and 2 μm for response to the topography. Cells on the 4 μm hemispheres were more likely to travel parallel to the local crystal axis than in other directions. Cells on the 8 μm topography were less likely to travel across the crowns of the hemispheres and were also more likely to make 30°-50° turns than on flat surfaces. These results show that surface topography can act as a significant barrier to surface motility and may therefore hinder surface exploration by bacteria. Because surface exploration can be a part of the process whereby bacteria form colonies and seek nutrients, these results help to elucidate the mechanism by which surface topography hinders biofilm formation.

Field burial results and SIMS analysis of the Chalk River glass blocks

International Nuclear Information System (INIS)

Tait, J.C.; Hocking, W.H.; Betteridge, J.S.; Bart, G.

1986-01-01

In 1959, 25 2-kg hemispherical blocks of aluminosilicate glass, each containing ∼90 MBq/g of mixed fission products, were buried in a sandy soil aquifer in the waste management area at the Chalk River Nuclear Laboratories. A second set of blocks, containing ∼260 MBq/g mixed fission products, was buried in 1960. One block from each test was retrieved in 1978 to undergo chemical and surface analysis. This report reviews the migration of the 90 Sr and 137 Cs plume in the soil and presents the results of SIMS depth profiling of the surface of a glass block. (author)

Secondary Ion Mass Spectrometry SIMS XI

Science.gov (United States)

Gillen, G.; Lareau, R.; Bennett, J.; Stevie, F.

2003-05-01

This volume contains 252 contributions presented as plenary, invited and contributed poster and oral presentations at the 11th International Conference on Secondary Ion Mass Spectrometry (SIMS XI) held at the Hilton Hotel, Walt Disney World Village, Orlando, Florida, 7 12 September, 1997. The book covers a diverse range of research, reflecting the rapid growth in advanced semiconductor characterization, ultra shallow depth profiling, TOF-SIMS and the new areas in which SIMS techniques are being used, for example in biological sciences and organic surface characterization. Papers are presented under the following categories: Isotopic SIMS Biological SIMS Semiconductor Characterization Techniques and Applications Ultra Shallow Depth Profiling Depth Profiling Fundamental/Modelling and Diffusion Sputter-Induced Topography Fundamentals of Molecular Desorption Organic Materials Practical TOF-SIMS Polyatomic Primary Ions Materials/Surface Analysis Postionization Instrumentation Geological SIMS Imaging Fundamentals of Sputtering Ion Formation and Cluster Formation Quantitative Analysis Environmental/Particle Characterization Related Techniques These proceedings provide an invaluable source of reference for both newcomers to the field and experienced SIMS users.

Obtention and applications of Cs-Ba-137m generators

International Nuclear Information System (INIS)

Karpeles, Alfredo; Rivero, Mario.

1974-11-01

The preparation of a sterile Ba-137m generator and the properties of the product eluted with different solutions are described. The developed generator uses a very high stable inorganic ion exchanger: hexacianoferrate deposited on small steel turnings. The high void volume of the absorbing bed allows elution velocities of >10 ml/min and elution yields over 70%. Elution curves are presented and purities of the product are given for following elutrians: diluted hydrochloric acid and sodium chloride solutions EDTA and calcium levulinate solutions. The product can be obtained sterile and useful for direct administration to patients for diagnostic studies in Nuclear Medicine. Applications in medical dynamic studies and radio-chemistry teaching are given. (author)

SIMS studies of low-K materials

International Nuclear Information System (INIS)

Lin Xuefeng; Smith, Stephen P.

2006-01-01

We report progress in conducting quantitative SIMS analyses of low-K materials. Electron-beam (e-beam) pre-irradiation of SIMS measurement sites was used to study the e-beam-induced effects on SIMS depth profiling of a porous organosilicate low-K material. Pre-irradiation of the sample surface using the e-beam causes a reduction in the thickness of the low-K film. SIMS profiling was used to sputter to identifiable marker positions within the pre-irradiated film. Physical measurement of the thickness of the remaining film was used to show that the e-beam-induced reduction in thickness occurs uniformly throughout the pre-irradiated film. Exposure of the film to the e-beam prior to SIMS analysis also resulted in minor changes in the composition of the film. However, pre-irradiation of the film is not part of the normal SIMS measurement procedure. We conclude that when the e-beam irradiation is used only for charge compensation during SIMS depth profiling, the SIMS analysis of the low-K material will not be significantly affected

Carcinoma associated fibroblasts (CAFs) promote breast cancer motility by suppressing mammalian Diaphanous-related formin-2 (mDia2).

Science.gov (United States)

Dvorak, Kaitlyn M; Pettee, Krista M; Rubinic-Minotti, Kaitlin; Su, Robin; Nestor-Kalinoski, Andrea; Eisenmann, Kathryn M

2018-01-01

The tumor microenvironment (TME) promotes tumor cell invasion and metastasis. An important step in the shift to a pro-cancerous microenvironment is the transformation of normal stromal fibroblasts to carcinoma-associated fibroblasts (CAFs). CAFs are present in a majority of solid tumors and can directly promote tumor cell motility via cytokine, chemokine and growth factor secretion into the TME. The exact effects that the TME has upon cytoskeletal regulation in motile tumor cells remain enigmatic. The conserved formin family of cytoskeleton regulating proteins plays an essential role in the assembly and/or bundling of unbranched actin filaments. Mammalian Diaphanous-related formin 2 (mDia2/DIAPH3/Drf3/Dia) assembles a dynamic F-actin cytoskeleton that underlies tumor cell migration and invasion. We therefore sought to understand whether CAF-derived chemokines impact breast tumor cell motility through modification of the formin-assembled F-actin cytoskeleton. In MDA-MB-231 cells, conditioned media (CM) from WS19T CAFs, a human breast tumor-adjacent CAF line, significantly and robustly increased wound closure and invasion relative to normal human mammary fibroblast (HMF)-CM. WS19T-CM also promoted proteasome-mediated mDia2 degradation in MDA-MB-231 cells relative to control HMF-CM and WS21T CAF-CM, a breast CAF cell line that failed to promote robust MDA-MB-231 migration. Cytokine array analysis of CM identified up-regulated secreted factors in WS19T relative to control WS21T CM. We identified CXCL12 as a CM factor influencing loss of mDia2 protein while increasing MDA-MB-231 cell migration. Our data suggest a mechanism whereby CAFs promote tumor cell migration and invasion through CXCL12 secretion to regulate the mDia2-directed cytoskeleton in breast tumor cells.

Redistribution of cesium-137 in southeastern watersheds

International Nuclear Information System (INIS)

McHenry, J.R.; Ritchie, J.C.

1975-01-01

Sediment samples from 14 southeastern agricultural reservoirs and surface samples from representative soils from the contributing water shed areas were analyzed for 137 Cs. The concentrations of 137 Cs measured reflect the nature of the watershed, its cover, its use, and man's activities. Since the redistribution of 137 Cs was assumed to result from soil erosion, recent erosion rates can be calculated from the measured 137 Cs accumulations in sediments and from the decreases in the 137 Cs calculated to have been deposited on upland soils. Measured concentrations of 137 Cs ranged from 14 to 158 nCi/m 2 in surface soils. As much as 525 nCi/m 2 of 137 Cs was measured in the deposited sediment profile. Watershed budgets for 137 Cs were calculated for three representative watersheds using available sediment survey information and the measured 137 Cs concentrations

PEMBUATAN SUMBER RADIASI GAMMA 137Cs DENGAN AKTIVITAS 20 mCi DARI PEB U3Si2-Al PASCA IRADIASI DALAM CONTAINER STAINLESS STEEL

Directory of Open Access Journals (Sweden)

Aslina Br. Ginting

2016-03-01

Full Text Available ABSTRAK PEMBUATAN SUMBER RADIASI GAMMA ISOTOP 137Cs DENGAN AKTIVITAS 20 mCi DARI PEB U3Si2-Al PASCA IRADIASI DALAM CONTAINER STAINLESS STEEL. Kegiatan uji pasca iradiasi pelat elemen bakar (PEB U3Si2-Al banyak menghasilkan larutan dengan keaktifan yang sangat tinggi. Larutan tersebut mengandung isotop 137Cs, uranium serta transuranium yang mempunyai waktu paroh panjang dan berbahaya bagi lingkungan. Namun larutan tersebut memiliki nilai ekonomis tinggi karena dapat dimanfaatkan sebagai bahan baku untuk pembuatan sumber radiasi sinar gamma isotop 137Cs. Hal ini dapat membantu bidang industri dalam memenuhi kebutuhan sumber radioaktif dalam negeri karena selama ini kebutuhan isotop 137Cs di Indonesia masih tergantung dari industri luar negeri. Selain itu, pengadaan dan transportasi isotop 137Cs dari luar negeri serta dalam penggunaannya memerlukan persyaratan yang cukup ketat dari Badan Pengawas Tenaga Nuklir Nasional (BAPETEN, sehingga menyebabkan harga isotop 137Cs menjadi mahal sampai di Indonesia. Dengan alasan tersebut, BATAN sebagai lembaga litbang nuklir di Indonesia perlu mempelajari pembuatan sumber radiasi gamma isotop 137Cs dari larutan hasil pengujian bahan bakar nuklir U3Si2-Al pasca iradiasi. Manfaat isotop 137Cs sangat luas antara lain digunakan dalam menganalisis sampel lingkungan, industri migas, konstruksi, radiografi, perikanan, rumah sakit dan pertambangan. Pembuatan sumber radiasi gamma isotop 137Cs dimulai dari pengumpulan larutan hasil pengujian PEB U3Si2-Al. Larutan larutan hasil pengujian mengandung isotop 137Cs dan isotop lainnya dikumpulkan menjadi satu dalam botol dengan volume 65 mL. Pemisahan isotop 137Cs dari hasil fisi lainnya dilakukan dengan metode penukar kation menggunakan zeolit Lampung dengan berat 45 gr. Hasil pemisahan diperoleh 137Cs-zeolit dalam fasa padat dan isotop lainnya berada dalam fasa cair. Padatan137Cs-zeolit kering kemudian kemudian ditimbang dan diukur aktivitasnya menggunakan spektrometer

SIMS applications workshop. Proceedings

Energy Technology Data Exchange (ETDEWEB)

NONE

1997-04-01

The first ANSTO/AINSE SIMS Workshop drew together a mixture of Surface Analysis experts and Surface Analysis users with the concept that SIMS analysis has to be enfolded within the spectrum of surface analysis techniques and that the user should select the technique most applicable to the problem. With this concept in mind the program was structured as sessions on SIMS Facilities; Applications to Mineral Surfaces; Applications to Biological Systems, Applications to Surfaces as Semi- conductors, Catalysts and Surface Coatings; and Applications to Ceramics

CalSimHydro Tool - A Web-based interactive tool for the CalSim 3.0 Hydrology Prepropessor

Science.gov (United States)

Li, P.; Stough, T.; Vu, Q.; Granger, S. L.; Jones, D. J.; Ferreira, I.; Chen, Z.

2011-12-01

CalSimHydro, the CalSim 3.0 Hydrology Preprocessor, is an application designed to automate the various steps in the computation of hydrologic inputs for CalSim 3.0, a water resources planning model developed jointly by California State Department of Water Resources and United States Bureau of Reclamation, Mid-Pacific Region. CalSimHydro consists of a five-step FORTRAN based program that runs the individual models in succession passing information from one model to the next and aggregating data as required by each model. The final product of CalSimHydro is an updated CalSim 3.0 state variable (SV) DSS input file. CalSimHydro consists of (1) a Rainfall-Runoff Model to compute monthly infiltration, (2) a Soil moisture and demand calculator (IDC) that estimates surface runoff, deep percolation, and water demands for natural vegetation cover and various crops other than rice, (3) a Rice Water Use Model to compute the water demands, deep percolation, irrigation return flow, and runoff from precipitation for the rice fields, (4) a Refuge Water Use Model that simulates the ponding operations for managed wetlands, and (5) a Data Aggregation and Transfer Module to aggregate the outputs from the above modules and transfer them to the CalSim SV input file. In this presentation, we describe a web-based user interface for CalSimHydro using Google Earth Plug-In. The CalSimHydro tool allows users to - interact with geo-referenced layers of the Water Budget Areas (WBA) and Demand Units (DU) displayed over the Sacramento Valley, - view the input parameters of the hydrology preprocessor for a selected WBA or DU in a time series plot or a tabular form, - edit the values of the input parameters in the table or by downloading a spreadsheet of the selected parameter in a selected time range, - run the CalSimHydro modules in the backend server and notify the user when the job is done, - visualize the model output and compare it with a base run result, - download the output SV file to be

137Cs in the western South Pacific Ocean

International Nuclear Information System (INIS)

Yamada, Masatoshi; Wang Zhongliang

2007-01-01

The 137 Cs activities were determined for seawater samples from the East Caroline, Coral Sea, New Hebrides, South Fiji and Tasman Sea (two stations) Basins of the western South Pacific Ocean by γ spectrometry using a low background Ge detector. The 137 Cs activities ranged from 1.4 to 2.3 Bq m -3 over the depth interval 0-250 m and decreased exponentially from the subsurface to 1000 m depth. The distribution profiles of 137 Cs activity at these six western South Pacific Ocean stations did not differ from each other significantly. There was a remarkable difference for the vertical profiles of 137 Cs activity between the East Caroline Basin station in this study and the GEOSECS (Geochemical Ocean Sections Study) station at the same latitude in the Equatorial Pacific Ocean; the 137 Cs inventory over the depth interval 100-1000 m increased from 400 ± 30 Bq m -2 to 560 ± 30 Bq m -2 during the period from 1973 to 1992. The total 137 Cs inventories in the western South Pacific Ocean ranged from 850 ± 70 Bq m -2 in the Coral Sea Basin to 1270 ± 90 Bq m -2 in the South Fiji Basin. Higher 137 Cs inventories were observed at middle latitude stations in the subtropical gyre than at low latitude stations. The 137 Cs inventories were 1.9-4.5 times (2.9 ± 0.7 on average) and 1.7-4.3 times (3.1 ± 0.7 on average) higher than that of the expected deposition density of atmospheric global fallout at the same latitude and that of the estimated 137 Cs deposition density in 10 o latitude by 10 deg. longitude grid data obtained by Aoyama et al. [Aoyama M, Hirose K, Igarashi Y. Re-construction and updating our understanding on the global weapons tests 137 Cs fallout. J Environ Monit 2006;8:431-438], respectively. The possible processes for higher 137 Cs inventories in the western South Pacific Ocean than that of the expected deposition density of atmospheric global fallout may be attributable to the inter-hemisphere dispersion of the atmospheric nuclear weapons testing 137 Cs from

Esophageal motility disorders

International Nuclear Information System (INIS)

Hannig, C.; Rummeny, E.; Wuttge-Hannig, A.

2007-01-01

For the better understanding of esophageal motility, the muscle texture and the distribution of skeletal and smooth muscle fibers in the esophagus are of crucial importance. Esophageal physiology will be shortly mentioned as far as necessary for a comprehensive understanding of peristaltic disturbances. Besides the pure depiction of morphologic criteria, a complete esophageal study has to include an analysis of the motility. New diagnostic tools with reduced radiation for dynamic imaging (digital fluoroscopy, videofluoroscopy) at 4-30 frames/s are available. Radiomanometry is a combination of a functional pressure measurement and a simultaneous dynamic morphologic analysis. Esophageal motility disorders are subdivided by radiologic and manometric criteria into primary, secondary, and nonclassifiable forms. Primary motility disorders of the esophagus are achalasia, diffuse esophageal spasm, nutcracker esophagus, and the hypertonic lower esophageal sphincter. The secondary motility disorders include pseudoachalasia, reflux-associated motility disorders, functionally caused impactions, Boerhaave's syndrome, Chagas' disease, scleroderma, and presbyesophagus. The nonclassificable motility disorders (NEMD) are a very heterogeneous collective. (orig.) [de

MiR-137 inhibited cell proliferation and migration of vascular smooth muscle cells via targeting IGFBP-5 and modulating the mTOR/STAT3 signaling.

Directory of Open Access Journals (Sweden)

Jin Pan

Full Text Available Abnormal proliferation of vascular smooth muscle cells (VSMCs contributes to the development of cardiovascular diseases. Studies have shown the great impact of microRNAs (miRNAs on the cell proliferation of VSMCs. This study examined the effects of miR-137 on the cell proliferation and migration of VSMCs and also explored the underlying molecular mechanisms. The mRNA and protein expression levels were determined by qRT-PCR and western blot assays, respectively. The CCK-8 assay, wound healing assay and transwell migration assay were performed to measure cell proliferation and migration of VSMCs. The miR-137-targeted 3'untranslated region of insulin-like growth factor-binding protein-5 (IGFBP-5 was confirmed by luciferase reporter assay. Platelet-derived growth factor-bb (PDGF-bb treatment enhanced cell proliferation and suppressed the expression of miR-137 in VSMCs. The gain-of-function and loss-of-function assays showed that overexpression of miR-137 suppressed the cell proliferation and migration, and also inhibited the expression of matrix genes of VSMCs; down-regulation of miR-137 had the opposite effects on VSMCs. Bioinformatics analysis and luciferase report assay results showed that IGFBP-5 was a direct target of miR-137, and miR-137 overexpression suppressed the IGFBP-5 expression and down-regulation of miR-137 increased the IGFBP-5 expression in VSMCs. PDGF-bb treatment also increased the IGFBP-5 mRNA expression. In addition, enforced expression of IGFBP-5 reversed the inhibitory effects of miR-137 on cell proliferation and migration of VSMCs. More importantly, overexpression of miR-137 also suppressed the activity of mTOR/STAT3 signaling in VSMCs. Taken together, the results suggest that miR-137 may suppress cell proliferation and migration of VSMCs via targeting IGFBP-5 and modulating mTOR/STAT3 signaling pathway.

Chern–Simons theory in SIM(1) superspace

International Nuclear Information System (INIS)

Vohánka, Jiří; Faizal, Mir

2015-01-01

In this paper, we will analyze a three-dimensional supersymmetric Chern–Simons theory in SIM(1) superspace formalism. The breaking of the Lorentz symmetry down to the SIM(1) symmetry breaks half the supersymmetry of the Lorentz invariant theory. So, the supersymmetry of the Lorentz invariant Chern–Simons theory with N=1 supersymmetry will break down to N=1/2 supersymmetry, when the Lorentz symmetry is broken down to the SIM(1) symmetry. First, we will write the Chern–Simons action using SIM(1) projections of N=1 superfields. However, as the SIM(1) transformations of these projections are very complicated, we will define SIM(1) superfields which transform simply under SIM(1) transformations. We will then express the Chern–Simons action using these SIM(1) superfields. Furthermore, we will analyze the gauge symmetry of this Chern–Simons theory. This is the first time that a Chern–Simons theory with N=1/2 supersymmetry will be constructed on a manifold without a boundary

Persistent enhancement of bacterial motility increases tumor penetration.

Science.gov (United States)

Thornlow, Dana N; Brackett, Emily L; Gigas, Jonathan M; Van Dessel, Nele; Forbes, Neil S

2015-11-01

Motile bacteria can overcome the transport limitations that hinder many cancer therapies. Active bacteria can penetrate through tissue to deliver treatment to resistant tumor regions. Bacterial therapy has had limited success, however, because this motility is heterogeneous, and within a population many individuals are non-motile. In human trials, heterogeneity led to poor dispersion and incomplete tumor colonization. To address these problems, a swarm-plate selection method was developed to increase swimming velocity. Video microscopy was used to measure the velocity distribution of selected bacteria and a microfluidic tumor-on-a-chip device was used to measure penetration through tumor cell masses. Selection on swarm plates increased average velocity fourfold, from 4.9 to 18.7 μm/s (P < 0.05) and decreased the number of non-motile individuals from 51% to 3% (P < 0.05). The selected phenotype was both robust and stable. Repeating the selection process consistently increased velocity and eliminated non-motile individuals. When selected strains were cryopreserved and subcultured for 30.1 doublings, the high-motility phenotype was preserved. In the microfluidic device, selected Salmonella penetrated deeper into cell masses than unselected controls. By 10 h after inoculation, control bacteria accumulated in the front 30% of cell masses, closest to the flow channel. In contrast, selected Salmonella accumulated in the back 30% of cell masses, farthest from the channel. Selection increased the average penetration distance from 150 to 400 μm (P < 0.05). This technique provides a simple and rapid method to generate high-motility Salmonella that has increased penetration and potential for greater tumor dispersion and clinical efficacy. © 2015 Wiley Periodicals, Inc.

Sequencing Information Management System (SIMS). Final report

Energy Technology Data Exchange (ETDEWEB)

Fields, C.

1996-02-15

A feasibility study to develop a requirements analysis and functional specification for a data management system for large-scale DNA sequencing laboratories resulted in a functional specification for a Sequencing Information Management System (SIMS). This document reports the results of this feasibility study, and includes a functional specification for a SIMS relational schema. The SIMS is an integrated information management system that supports data acquisition, management, analysis, and distribution for DNA sequencing laboratories. The SIMS provides ad hoc query access to information on the sequencing process and its results, and partially automates the transfer of data between laboratory instruments, analysis programs, technical personnel, and managers. The SIMS user interfaces are designed for use by laboratory technicians, laboratory managers, and scientists. The SIMS is designed to run in a heterogeneous, multiplatform environment in a client/server mode. The SIMS communicates with external computational and data resources via the internet.

Imaging of dopant distribution in optical fibers with an orthogonal TOF SIMS

Czech Academy of Sciences Publication Activity Database

Lorinčík, Jan; Kašík, Ivan; Vaniš, Jan; Sedláček, L.; Dluhoš, J.

2014-01-01

Roč. 46, č. 1 (2014), s. 238-240 ISSN 0142-2421. [19th International Conference on Secondary Ion Mass Spectrometry ( SIMS ). Jeju, 29.09.2013-04.10.2013] Grant - others:GA AV ČR(CZ) M100761202 Institutional support: RVO:67985882 Keywords : TOF SIMS * Optical fibers * Dopant Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.245, year: 2014

Deployment and early results from the CanSIM (Canadian Solar Spectral Irradiance Meter) network

Science.gov (United States)

Tatsiankou, Viktar; Hinzer, Karin; Schriemer, Henry; McVey-White, Patrick; Beal, Richard

2017-09-01

Three of seven stations have been deployed as part of the Canadian Solar Spectral Irradiance (CanSIM) network situated in Ottawa, Varennes and Egbert to measure long term spectral variation of the direct normal (DNI) and global horizontal irradiances (GHI) across the country. Every station is equipped with a solar tracker, SolarSIM-D2+, SolarSIM-G+, and SR20 pyranometer, reporting the spectral DNI, GHI, diffuse horizontal irradiance (DHI) and aerosol optical depth in the 280-4000 nm range, broadband DNI, GHI, and DHI, atmospheric total column ozone and water vapour amounts. The spectral GHI as measured by the SolarSIM-G+ was within 5% as compared to EKO MS-700 spectroradiometer in 350-1050 nm range on 17 March 2017. The difference in the GHI as reported by SolarSIM-G+ and SR20 pyranometer from all stations was within 2% on 14 April 2017. Furthermore, on this day, the daily GHI sum for the Ottawa, Varennes, and Egbert stations was 7.01, 6.95, and 7.11 kWh/m2, respectively, while the daily DNI sum was 10.65, 10.86, 10.04 kWh/m2, respectively.

BioFET-SIM

DEFF Research Database (Denmark)

Hediger, M. R.; Martinez, K. L.; Nygård, J.

2013-01-01

Biosensors based on nanowire field effect transistor (FET) have received much attention in recent years as a way to achieve ultra-sensitive and label-free sensing of molecules of biological interest. The BioFET-SIM computer model permits the analysis and interpretation of experimental sensor...... signals through its web-based interface www.biofetsim.org. The model also allows for predictions of the effects of changes in the experimental setup on the sensor signal. After an introduction to nanowire-based FET biosensors, this chapter reviews the theoretical basis of BioFET-SIM models describing both...... single and multiple charges on the analyte. Afterwards the usage of the interface and its relative command line version is briefly shown. Finally, possible applications of the BioFET-SIM model are presented. Among the possible uses of the interface, the effects on the predicted signal of pH, buffer ionic...

Quantitative analysis of styrene butadiene copolymers using S-SIMS and LA-FTICRMS

International Nuclear Information System (INIS)

Ruch, D.; Boes, C.; Zimmer, R.; Muller, J.F.; Migeon, H.-N.

2003-01-01

Styrene butadiene copolymers (SBR) have been analyzed by static secondary ion mass spectrometry (S-SIMS) and laser ablation Fourier transform ion cyclotron resonance mass spectrometry (LA-FTICRMS) to obtain quantitative information based on specific peaks knowing that the complication of this system is that there are no characteristic SIMS peaks unique to each styrene and butadiene monomer. So, to overcome this problem, a silver deposition has been applied into polystyrene (PS), butadiene rubber (BR) and SBR. By this way, new secondary ions are detected in particular silver cationized butadiene and styrene monomers at m/z 161/163 and 211/213, respectively. The LA-FTICRMS experiments do not require pre-treatment. At high laser power density, UV photons (193, 266 and 355 nm) allow to detect directly the styrene and butadiene ions at m/z 104 and 54, respectively. Using these SIMS and LA-FTICRMS peaks, it is possible to obtain quantitative results. However, the silver coating in the SIMS experiment seems to have a great influence on the obtention of quantitative information. For LA-FTICRMS experiments, the best results seem to be obtained at the 355 nm wavelength

Cesium-137 body burdens in Norwegian Lapps, 1965-1983

International Nuclear Information System (INIS)

Westerlund, E.A.; Berthelsen, T.; Berteig, L.

1987-01-01

Results of measurements of the whole-body contents of 137 Cs during the period 1965-1983 in Lapps from the Kautokeino area in Norway are reported with measurements of 137 Cs in reindeer meat during the period 1966-1983. By using available data on 137 Cs in precipitation for the period 1950-1980, transfer coefficients from 137 Cs in precipitation to reindeer meat have been assessed. A correlation between the 137 Cs content in reindeer meat and the 137 Cs content in Lapp reindeer breeders has been established. The average whole-body committed dose equivalent, H50, to the reindeer breeders from internally deposited 137 Cs from intakes up to year 2000 was assessed to 13 mSv with a peak value of 30 mSv. In comparison, the corresponding committed dose equivalent to the Norwegian population from internally deposited 137 Cs has been estimated to be about 1 mSv. The higher intake of 137 Cs by reindeer breeders is due to the lichen-reindeer-man exposure pathway

Engineering bacterial motility towards hydrogen-peroxide.

Science.gov (United States)

Virgile, Chelsea; Hauk, Pricila; Wu, Hsuan-Chen; Shang, Wu; Tsao, Chen-Yu; Payne, Gregory F; Bentley, William E

2018-01-01

Synthetic biologists construct innovative genetic/biological systems to treat environmental, energy, and health problems. Many systems employ rewired cells for non-native product synthesis, while a few have employed the rewired cells as 'smart' devices with programmable function. Building on the latter, we developed a genetic construct to control and direct bacterial motility towards hydrogen peroxide, one of the body's immune response signaling molecules. A motivation for this work is the creation of cells that can target and autonomously treat disease, the latter signaled by hydrogen peroxide release. Bacteria naturally move towards a variety of molecular cues (e.g., nutrients) in the process of chemotaxis. In this work, we engineered bacteria to recognize and move towards hydrogen peroxide, a non-native chemoattractant and potential toxin. Our system exploits oxyRS, the native oxidative stress regulon of E. coli. We first demonstrated H2O2-mediated upregulation motility regulator, CheZ. Using transwell assays, we showed a two-fold increase in net motility towards H2O2. Then, using a 2D cell tracking system, we quantified bacterial motility descriptors including velocity, % running (of tumble/run motions), and a dynamic net directionality towards the molecular cue. In CheZ mutants, we found that increased H2O2 concentration (0-200 μM) and induction time resulted in increased running speeds, ultimately reaching the native E. coli wild-type speed of ~22 μm/s with a ~45-65% ratio of running to tumbling. Finally, using a microfluidic device with stable H2O2 gradients, we characterized responses and the potential for "programmed" directionality towards H2O2 in quiescent fluids. Overall, the synthetic biology framework and tracking analysis in this work will provide a framework for investigating controlled motility of E. coli and other 'smart' probiotics for signal-directed treatment.

siMS Score: Simple Method for Quantifying Metabolic Syndrome.

Science.gov (United States)

Soldatovic, Ivan; Vukovic, Rade; Culafic, Djordje; Gajic, Milan; Dimitrijevic-Sreckovic, Vesna

2016-01-01

To evaluate siMS score and siMS risk score, novel continuous metabolic syndrome scores as methods for quantification of metabolic status and risk. Developed siMS score was calculated using formula: siMS score = 2*Waist/Height + Gly/5.6 + Tg/1.7 + TAsystolic/130-HDL/1.02 or 1.28 (for male or female subjects, respectively). siMS risk score was calculated using formula: siMS risk score = siMS score * age/45 or 50 (for male or female subjects, respectively) * family history of cardio/cerebro-vascular events (event = 1.2, no event = 1). A sample of 528 obese and non-obese participants was used to validate siMS score and siMS risk score. Scores calculated as sum of z-scores (each component of metabolic syndrome regressed with age and gender) and sum of scores derived from principal component analysis (PCA) were used for evaluation of siMS score. Variants were made by replacing glucose with HOMA in calculations. Framingham score was used for evaluation of siMS risk score. Correlation between siMS score with sum of z-scores and weighted sum of factors of PCA was high (r = 0.866 and r = 0.822, respectively). Correlation between siMS risk score and log transformed Framingham score was medium to high for age groups 18+,30+ and 35+ (0.835, 0.707 and 0.667, respectively). siMS score and siMS risk score showed high correlation with more complex scores. Demonstrated accuracy together with superior simplicity and the ability to evaluate and follow-up individual patients makes siMS and siMS risk scores very convenient for use in clinical practice and research as well.

Determination of caesium-137 in liquid milk

International Nuclear Information System (INIS)

Jankowska, S.

1969-01-01

A technique for determining caesium-137 in milk on the basis of caesium-137 sorption has been adapted according to the method of Broadbank. The caesium carrier is not added, because its addition decreases the sensitivity of measurement. Two procedures were used for the assay of caesium-137 in milk: (a) Sorption of caesium-137 from the solution of milk ash dissolved in 3M HNO 3 ; (b) Sorption of caesium-137 from whey. In both methods the radioactivity of caesium-137 was determined directly on the ammonium molybdophosphate (AMP) bed by means of counting

SUPPLEMENTARY COMPARISON: Report of the bilateral comparison of the calibrations of hydrometers for liquid density determination between CENAM-Mexico and INRIM-Italy: SIM.M.D-S1

Science.gov (United States)

Becerra, Luis Omar; Lorefice, Salvatore

2009-01-01

Hydrometers are instruments usually made of glass which are widely used for different levels of precision to measure liquid density and related quantities to control different products and processes. This bilateral comparison on the calibration of hydrometers shows that results reported by CENAM-Mexico and INRIM-Italy are consistent within the claimed uncertainty in the range of 800 kg/m3 to 1200 kg/m3. This bilateral comparison is intended to link the two regional comparisons SIM.M.D-K4 and EURAMET.D-K4. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by SIM, according to the provisions of the CIPM Mutual Recognition Arrangement (MRA).

Quantitative determination of uranium by SIMS

International Nuclear Information System (INIS)

Kuruc, J.; Harvan, D.; Galanda, D.; Matel, L.; Aranyosiova, M.; Velic, D.

2008-01-01

The paper presents results of quantitative measurements of uranium-238 by secondary ion mass spectrometry (SIMS) with using alpha spectrometry as well as complementary technique. Samples with specific activity of uranium-238 were prepared by electrodeposition from aqueous solution of UO 2 (NO 3 ) 2 ·6H 2 O. We tried to apply SIMS to quantitative analysis and search for correlation between intensity obtained from SIMS and activity of uranium-238 in dependence on the surface's weight and possibility of using SIMS in quantitative analysis of environmental samples. The obtained results and correlations as well as results of two real samples measurements are presented in this paper. (authors)

siMS Score: Simple Method for Quantifying Metabolic Syndrome

OpenAIRE

Soldatovic, Ivan; Vukovic, Rade; Culafic, Djordje; Gajic, Milan; Dimitrijevic-Sreckovic, Vesna

2016-01-01

Objective To evaluate siMS score and siMS risk score, novel continuous metabolic syndrome scores as methods for quantification of metabolic status and risk. Materials and Methods Developed siMS score was calculated using formula: siMS score = 2*Waist/Height + Gly/5.6 + Tg/1.7 + TAsystolic/130?HDL/1.02 or 1.28 (for male or female subjects, respectively). siMS risk score was calculated using formula: siMS risk score = siMS score * age/45 or 50 (for male or female subjects, respectively) * famil...

Sims, Christopher Albert (born 1942)

NARCIS (Netherlands)

Boumans, M.; Durlauf, S.N.; Blume, L.E.

2012-01-01

Christopher Sims is one of the leaders in time-series econometrics and empirical macroeconomics and is well known for introducing the VAR approach to econometrics and macroeconomic modelling. Sims' main contribution to empirical macroeconomics was to show how macro-econometric modeling should be

SIMS depth profile analysis of environmental microparticles

International Nuclear Information System (INIS)

Konarski, P.

2000-01-01

Environmental and technological research demands chemical characterization of aerosol particles so minute in size, that conventional methods for bulk analyses are simply not applicable. In this work novel application of secondary ion mass spectrometry (SIMS) for characterization of microparticles suspended in atmosphere of the working environment of glass plant Thomson Polkolor, Piaseczno and steelworks Huta Sendzimira, Cracow is presented. The new technique based on sample rotation in depth profile analysis of sub-micrometer particulate material was performed on SAJW-02 analyser equipped with Balzers 16 mm quadrupole spectrometer and sample rotation manipulator using 5 keV Ar + and O 2 + ion beams. The results were compared with the standard method used on ims-3f Cameca analyser 12 keV O 2 + ion beam. Grain size distributions of aerosol microparticles were estimated using eight-stage cascade impactor with particle size range of 0.2 μm to 15 μm. Elemental concentration and crystalline structure of the collected dust particles were performed using spark source mass spectrometry and X-ray diffraction methods. SIMS depth profile analysis shows that sub-micrometer particles do not have uniform morphology, The core-shell structure has been observed for particles collected in both factories. Presented models show that the steelworks particles consists mainly of iron and manganese cores. At the shells of these microparticles :lead, chlorine and fluorine are found. The cores of glass plant submicrometer particles consists mainly of lead-zirconium glass covered by a shell containing carbon and copper. Sample rotation technique applied SIMS appears to be an effective tool for environmental microparticle morphology studies. (author)

Bio-SimVerb and Bio-SimLex: wide-coverage evaluation sets of word similarity in biomedicine.

Science.gov (United States)

Chiu, Billy; Pyysalo, Sampo; Vulić, Ivan; Korhonen, Anna

2018-02-05

Word representations support a variety of Natural Language Processing (NLP) tasks. The quality of these representations is typically assessed by comparing the distances in the induced vector spaces against human similarity judgements. Whereas comprehensive evaluation resources have recently been developed for the general domain, similar resources for biomedicine currently suffer from the lack of coverage, both in terms of word types included and with respect to the semantic distinctions. Notably, verbs have been excluded, although they are essential for the interpretation of biomedical language. Further, current resources do not discern between semantic similarity and semantic relatedness, although this has been proven as an important predictor of the usefulness of word representations and their performance in downstream applications. We present two novel comprehensive resources targeting the evaluation of word representations in biomedicine. These resources, Bio-SimVerb and Bio-SimLex, address the previously mentioned problems, and can be used for evaluations of verb and noun representations respectively. In our experiments, we have computed the Pearson's correlation between performances on intrinsic and extrinsic tasks using twelve popular state-of-the-art representation models (e.g. word2vec models). The intrinsic-extrinsic correlations using our datasets are notably higher than with previous intrinsic evaluation benchmarks such as UMNSRS and MayoSRS. In addition, when evaluating representation models for their abilities to capture verb and noun semantics individually, we show a considerable variation between performances across all models. Bio-SimVerb and Bio-SimLex enable intrinsic evaluation of word representations. This evaluation can serve as a predictor of performance on various downstream tasks in the biomedical domain. The results on Bio-SimVerb and Bio-SimLex using standard word representation models highlight the importance of developing dedicated

Secondary ion mass spectrometry (SIMS)

International Nuclear Information System (INIS)

Grasserbauer, M.

1986-01-01

After an introductory chapter the subject is covered under the following headings: principles and physical fundamentals, measurement equipment, analytic characteristics, sample preparation, special measuring techniques for insulators, analytic procedures and applications of SIMS, summarized evaluation of SIMS. 108 references, 60 figures, and 13 tables are included

Modelling 137Cs uptake in plants from undisturbed soil monoliths

International Nuclear Information System (INIS)

Waegeneers, Nadia; Smolders, Erik; Merckx, Roel

2005-01-01

A model predicting 137 Cs uptake in plants was applied on data from artificially contaminated lysimeters. The lysimeter data involve three different crops (beans, ryegrass and lettuce) grown on five different soils between 3 and 5 years after contamination and where soil solution composition was monitored. The mechanistic model predicts plant uptake of 137 Cs from soil solution composition. Predicted K concentrations in the rhizosphere were up to 50-fold below that in the bulk soil solution whereas corresponding 137 Cs concentration gradients were always less pronounced. Predictions of crop 137 Cs content based on rhizosphere soil solution compositions were generally closer to observations than those based on bulk soil solution composition. The model explained 17% (beans) to 91% (lettuce) of the variation in 137 Cs activity concentrations in the plants. The model failed to predict the 137 Cs activity concentration in ryegrass where uptake of the 5-year-old 137 Cs from 3 soils was about 40-fold larger than predicted. The model generally underpredicted crop 137 Cs concentrations at soil solution K concentration below about 1.0 mM. It is concluded that 137 Cs uptake can be predicted from the soil solution composition at adequate K nutrition but that significant uncertainties remain when soil solution K is below 1 mM

IntNetLncSim: an integrative network analysis method to infer human lncRNA functional similarity.

Science.gov (United States)

Cheng, Liang; Shi, Hongbo; Wang, Zhenzhen; Hu, Yang; Yang, Haixiu; Zhou, Chen; Sun, Jie; Zhou, Meng

2016-07-26

Increasing evidence indicated that long non-coding RNAs (lncRNAs) were involved in various biological processes and complex diseases by communicating with mRNAs/miRNAs each other. Exploiting interactions between lncRNAs and mRNA/miRNAs to lncRNA functional similarity (LFS) is an effective method to explore function of lncRNAs and predict novel lncRNA-disease associations. In this article, we proposed an integrative framework, IntNetLncSim, to infer LFS by modeling the information flow in an integrated network that comprises both lncRNA-related transcriptional and post-transcriptional information. The performance of IntNetLncSim was evaluated by investigating the relationship of LFS with the similarity of lncRNA-related mRNA sets (LmRSets) and miRNA sets (LmiRSets). As a result, LFS by IntNetLncSim was significant positively correlated with the LmRSet (Pearson correlation γ2=0.8424) and LmiRSet (Pearson correlation γ2=0.2601). Particularly, the performance of IntNetLncSim is superior to several previous methods. In the case of applying the LFS to identify novel lncRNA-disease relationships, we achieved an area under the ROC curve (0.7300) in experimentally verified lncRNA-disease associations based on leave-one-out cross-validation. Furthermore, highly-ranked lncRNA-disease associations confirmed by literature mining demonstrated the excellent performance of IntNetLncSim. Finally, a web-accessible system was provided for querying LFS and potential lncRNA-disease relationships: http://www.bio-bigdata.com/IntNetLncSim.

Ion bombardment techniques - recent developments in SIMS

International Nuclear Information System (INIS)

Konarski, P.; Miśnik, M.

2013-01-01

We present a short review of cluster ion bombardment technique recently applied in SIMS. Many advantages of using cluster ion beams are specified over monoatomic ion species. Cluster ions open really new perspectives especially in organic based structures analysis. Nevertheless cluster ions are not the perfect solution and still new ideas of ion erosion in SIMS are needed. Another issue discussed is 'storing matter' technique applied for quantitative analysis in SIMS. Simple idea of sputter deposition of eroded material onto rotating substrate and then analysing the stored material allows to avoid strong matrix effects in SIMS. Presented are the results performed in Tele and Radio Research Institute, Warszawa, Poland. These are the first results of ‘storing matter’ technique performed in one analytical chamber of SIMS instrument. (authors)

Motility Disorders in Children.

Science.gov (United States)

Nurko, Samuel

2017-06-01

Gastrointestinal motility disorders in the pediatric population are common and can range from benign processes to more serious disorders. Performing and interpreting motility evaluations in children present unique challenges. There are primary motility disorders but abnormal motility may be secondary due to other disease processes. Diagnostic studies include radiographic scintigraphic and manometry studies. Although recent advances in the genetics, biology, and technical aspects are having an important impact and have allowed for a better understanding of the pathophysiology and therapy for gastrointestinal motility disorders in children, further research is needed to be done to have better understanding of the pathophysiology and for better therapies. Copyright © 2017 Elsevier Inc. All rights reserved.

Some applications of SIMS in conservation science, archaeometry and cosmochemistry

International Nuclear Information System (INIS)

McPhail, D.S.

2006-01-01

Some applications of SIMS in conservation science, archaeometry and cosmochemistry are described. Ultra-low energy SIMS depth profiling and TOF-SIMS imaging are used to study the corrosion of low-lime glass vessels from the V and A museum. Static SIMS and focused ion beam (FIB) SIMS are used to study the effects of laser cleaning on museum artefacts. Archaeological glass from Raqqa, Syria is studied with FIB-SIMS and micrometeorite impacts on space vessels are studied with FIB and FIB-SIMS. The new analytical challenges provided to the SIMS community by these materials are presented and the ethical issues associated with sampling and destructive analysis discussed

SIMS analysis: Development and evaluation 1994 summary report

International Nuclear Information System (INIS)

Groenewold, G.S.; Appelhans, A.D.; Ingram, J.C.; Delmore, J.E.; Dahl, D.A.

1994-12-01

Secondary ion mass spectrometry (SIMS) was evaluated for applicability to the characterization of salt cake and environmental samples. Salt cake is representative of waste found in radioactive waste storage tanks located at Hanford and at other DOE sites; it consists of nitrate, nitrite, hydroxide, and ferrocyanide salts, and the samples form the tanks are extremely radioactive. SIMS is an attractive technology for characterizing these samples because it has the capability for producing speciation information with little or no sample preparation, and it generates no additional waste. Experiments demonstrated that substantial speciation information could be readily generated using SIMS: metal clusters which include nitrate, nitrite, hydroxide, carbonate, cyanide, ferrocyanide and ferricyanide were observed. In addition, the mechanism of SIMS desorption of tributyl phosphate (TBP) was clearly identified, and minimum detection limit studies involving TBP were performed. Procurements leading to the construction of an ion trap SIMS instrument were initiated. Technology transfer of SIMS components to three instrument vendors was initiated. For FY-95, the SIMS evaluation program has been redirected toward identification of metal species on environmental samples

Supplement to CCM.D-K4 'Hydrometer' report: linkage of EURAMET.M.D-K4 comparison, SIM.M.D-K4 comparison and the supplementary SIM.M.D-S2 to CCM.D-K4 'Hydrometer'

Science.gov (United States)

Lorefice, S.; Becerra, L. O.

2017-01-01

Evaluation of different types of comparisons to a common set of reference values of a CIPM key comparison is essential to satisfy the concept of the CIPM Mutual Recognition Arrangement (CIPM MRA), where the DoEs of any participant who took part in comparisons should be within the Calibration and Measurement Capability (CMC) section of the CIPM MRA Key Comparison Data Base. The subject of this supplementary report is therefore to present the equivalence of each National Metrological Institute (NMI) participant in the CCM.D-K4 'Hydrometer' key comparison, which was performed in the density range 600 kg/m3 to 2000 kg/m3 at the temperature of 20 °C, and the linkage of the European and Inter-American NMI results performed in the RMO.M.D-K4 comparisons as well as those of the supplementary SIM.M.D-S2 to the common set of KCRVs of the CCM.D-K4 'Hydrometer'. The linking procedure has been obtained by numerical simulation, based on the Monte Carlo method, in which the differences in the results of the different comparison between the intended laboratory and one or more linking laboratory/ies, which took part in both comparisons, are correlated with a continuous function describing the DoEs of the linking laboratory/ies with respect to the common set of KCRVs of the CCM.D-K4. Main text To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCM, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

Distribution of caesium-137 in the Mediterranean Sea

International Nuclear Information System (INIS)

Fukai, R.; Ballestra, S.; Vas, D.

1980-01-01

The International Laboratory of Marine Radioactivity (Monaco) conducted several oceanographic cruises during 1975-1977 to collect data on heavy metals and chlorinated hydrocarbons in the open Mediterranean. Sea water samples for radionuclide measurements were also collected on these cruises. The 137 Cs measurements in these samples are presented and discussed. After collection sea water was immediately acidified to pH 1.5 and 137 Cs was sorbed on solid ammonium phosphomolybdate together with added stable cesium carrier. After dissolution of AMP by NaoH, Cs was separated from K and Rb by ion exchange, precipitated as chloroplatinate and beta-counted. The surface concentrations of 137 Cs in the different areas of the Mediterranean fall in the range of 80-180 fCi 137 Cs/l, the average of all values being 126 +- 7 fCi 137 Cs. The vertical distribution of 137 Cs measured at four different locations varied considerably. It increased from surface to a maximum at a depth between 50m and 250m and then decreased with depth. The depth of maximum concentration differed from station to station but was always above the chlorinity maximum. The vertical distribution, therefore, seems to be closely related to vertical water mass movements. The inventories of 137 Cs delivered by radioactive fallout into the Mediterranean water columns are computed on the basis 137 Cs/ 90 Sr activity ratio and presented. (M.G.B.)

Inventories and fluxes of 137Cs in the Syrian land

International Nuclear Information System (INIS)

Al-Masri, M. S.; Amin, Y.

2005-03-01

Cesium-137 inventories and atmospheric fluxes have been determined using radiocesium distributions in undistributed soil profiles, collected from 38 sites distributed all over the Syrian lands. Results have shown that 137 Cs inventories determination by Soil Layers Sum Method is more accurate than the Integration Method, where the best curve fitting of 137 Cs distribution with depth is difficult to establish. 137 Cs inventories ranged from 441 Bq.m - 2 and 13312 Bq.m - 2 using the Layers Sum Method with a mean value of 3679 Bq.m - 2; the highest values observed were in the coastal, middle and north east regions. This is due to the fact that most of Chernobyl accident atmospheric fall-out of cesium 137 had entered the Syrian land came from the west boarders (Mediterranean sea). While the lowest values were found to be in the samples collected from the east south region. In addition, 137 Cs flux ranged from 3.1 kBq m - 2y - 1 and 527.8 kBq m - 2 y - 1 with a mean value of 65.7 kBq m - 2y - 1. Moreover, there was a semi linear relationship found between 137 Cs flux and the height above sea level. While no linear relationship was found between 137 Cs flux and annual rainfall. On the other hand, the external radiation dose to Syrians that due to gamma-rays emitted from cesium 137 decay has been determined and reached a mean value of 166μ Sv.y - 1. This value is about 20% of the radiation dose received by the Syrian from naturally occurring radionuclides in soil. (Author)

TOF-SIMS imaging technique with information entropy

International Nuclear Information System (INIS)

Aoyagi, Satoka; Kawashima, Y.; Kudo, Masahiro

2005-01-01

Time-of-flight secondary ion mass spectrometry (TOF-SIMS) is capable of chemical imaging of proteins on insulated samples in principal. However, selection of specific peaks related to a particular protein, which are necessary for chemical imaging, out of numerous candidates had been difficult without an appropriate spectrum analysis technique. Therefore multivariate analysis techniques, such as principal component analysis (PCA), and analysis with mutual information defined by information theory, have been applied to interpret SIMS spectra of protein samples. In this study mutual information was applied to select specific peaks related to proteins in order to obtain chemical images. Proteins on insulated materials were measured with TOF-SIMS and then SIMS spectra were analyzed by means of the analysis method based on the comparison using mutual information. Chemical mapping of each protein was obtained using specific peaks related to each protein selected based on values of mutual information. The results of TOF-SIMS images of proteins on the materials provide some useful information on properties of protein adsorption, optimality of immobilization processes and reaction between proteins. Thus chemical images of proteins by TOF-SIMS contribute to understand interactions between material surfaces and proteins and to develop sophisticated biomaterials

Characterization of plasma-functionalized surfaces by means of Tof-SIMS and multivariate analysis methods; Charakterisierung von plasmafunktionalisierten Oberflaechen mittels ToF-SIMS und multivariaten Analysemethoden

Energy Technology Data Exchange (ETDEWEB)

Gradowski, M. von

2006-11-13

The basic principles and opportunities of surface characterisation of selected functionalised samples via ToF-SIMS (time-of-flight secondary ion mass spectrometry) are presented. One major focus of the project was the investigation of non-cohesive surface layers which could exhibit either domain like structure or well defined single functionalised surfaces. By means of ToF-SIMS with the ability of displaying the lateral distribution of surface fragments information on the structure and surface density of specific fragments on the investigated film can be obtained. The combination of the ToF-SIMS experiment with a multivariate algorithm (partial least squares, PLS) provides an interesting opportunity to quantitatively determine surface properties such as elemental and molecular concentrations. Due to the fact that the ToF-SIMS spectrum consist of a huge amount of intensities, a single one-dimensional correlation (e.g. CF{sub 3} fragment intensity <-{yields} CF{sub 3} concentration) would disregard the rest of the spectral information. The large number of fragment intensities in the spectrum is representative for the chemical structure of the analysed surface. Therefore, it is crucial to consider this total information for the quantification of surface properties (element concentration, water contact angle etc.). Furthermore, this method allows the determination of surface properties with a lateral resolution of a few microns only. This can be used for chemically structured surfaces which for many applications show micrometer sized surface structures. Finally, a successful application of the multivariate models is presented for samples from the biological and medical area. Human fibroblasts and pancreas cells have been cultivated on plasma functionalised surfaces in order to study the influence of the functionalisation on the cell growth. The samples have been covered by TEM grids with meshes in the {mu}m range before the plasma treatment to generate structured

Caesium-137 distribution, inventories and accumulation history in the Baltic Sea sediments

International Nuclear Information System (INIS)

Zaborska, Agata; Winogradow, Aleksandra; Pempkowiak, Janusz

2014-01-01

The Baltic Sea is susceptible to pollution by hazardous substances due to limited water exchange, shallowness, and the large catchment area. Radionuclides, particularly 137 Cs, are one of the most hazardous anthropogenic substances present in the Baltic environment. This study was conducted to present 137 Cs present contamination that should further be a subject of reliable monitoring when the new Nuclear Power Plant is put into operation in the northern Poland. The sea-wide, up to date distribution of 137 Cs activities and inventories in the Baltic Sea bottom sediments are presented. The 137 Cs activity concentrations were measured in 30 cm long sediment cores collected at 22 sampling stations. Sediment accumulation rates were quantified by 210 Pb geochronology to follow the history of 137 Cs accumulation. The 137 Cs inventories and fluxes were calculated. Most of the Baltic Sea sediments accumulated 137 Cs in the range from 750 to 2675 Bq m −2 . The Bothnian Bay is severely contaminated by 137 Cs with inventories up to 95,191 Bq m −2 . This region is moreover characterized by extremely large patchiness of 137 Cs inventories. The 137 Cs annual fluxes are highest at the two stations located at the Bothnian Bay (342 Bq m −2 and 527 Bq m −2 ) due to large Chernobyl 137 Cs contamination of that region and high sediment accumulation rates. When these stations are excluded, the recent, annual mean value of 137 Cs load to the Baltic Sea deposits is 38 ± 22 Bq m −2 . The distribution of radio-caesium inventories over the Baltic Sea nowadays reflects the pattern of Chernobyl contamination. The radio-caesium deposited in surface sediments is not permanently buried, but may be resuspended and redeposited by currents, bioturbation or anthropogenic activities. -- Highlights: • 137 Cs contamination in the Baltic Sea was studied before the new NPP is put into operation. • Bothnian Sea sediments are severely contaminated by 137 Cs (inventories up to 95,191 Bq m �

Accurate depth profiling for ultra-shallow implants using backside-SIMS

International Nuclear Information System (INIS)

Hongo, Chie; Tomita, Mitsuhiro; Takenaka, Miyuki

2004-01-01

We studied methods for accurate depth profiling for ultra-shallow implants using backside-SIMS. For the measurement of ultra-shallow profiles, the effects of surface transient and atomic mixing are not negligible. Therefore, we applied backside-SIMS to analyze ultra-shallow doping in order to exclude these effects. Backside-SIMS profiles show a sharper ion implantation tail than surface-side-SIMS profiles. In addition, the primary ion energy dependence becomes weaker when backside-SIMS is used [Surf. Interf. Anal. 29 (2000) 362; Appl. Surf. Sci. 203-204 (2003) 264; J. Vac. Sci. Technol. B 21 (2003) 1422]. However, the peak concentration of the backside sample was lower than that of the surface-side sample. Therefore, the sample flatness was estimated using the SIMS response function. Furthermore, SIMS profiles were simulated using SIMS response functions. This simulation shows how the sample flatness affects the SIMS profile

ActivitySim: large-scale agent based activity generation for infrastructure simulation

Energy Technology Data Exchange (ETDEWEB)

Gali, Emmanuel [Los Alamos National Laboratory; Eidenbenz, Stephan [Los Alamos National Laboratory; Mniszewski, Sue [Los Alamos National Laboratory; Cuellar, Leticia [Los Alamos National Laboratory; Teuscher, Christof [PORTLAND STATE UNIV

2008-01-01

The United States' Department of Homeland Security aims to model, simulate, and analyze critical infrastructure and their interdependencies across multiple sectors such as electric power, telecommunications, water distribution, transportation, etc. We introduce ActivitySim, an activity simulator for a population of millions of individual agents each characterized by a set of demographic attributes that is based on US census data. ActivitySim generates daily schedules for each agent that consists of a sequence of activities, such as sleeping, shopping, working etc., each being scheduled at a geographic location, such as businesses or private residences that is appropriate for the activity type and for the personal situation of the agent. ActivitySim has been developed as part of a larger effort to understand the interdependencies among national infrastructure networks and their demand profiles that emerge from the different activities of individuals in baseline scenarios as well as emergency scenarios, such as hurricane evacuations. We present the scalable software engineering principles underlying ActivitySim, the socia-technical modeling paradigms that drive the activity generation, and proof-of-principle results for a scenario in the Twin Cities, MN area of 2.6 M agents.

K2-137 b: an Earth-sized planet in a 4.3-h orbit around an M-dwarf

DEFF Research Database (Denmark)

Smith, A. M. S.; Cabrera, J.; Csizmadia, Sz

2018-01-01

We report the discovery in K2's Campaign 10 of a transiting terrestrial planet in an ultra-short-period orbit around an M3-dwarf. K2-137 b completes an orbit in only 4.3 h, the second shortest orbital period of any known planet, just 4 min longer than that of KOI 1843.03, which also orbits an M-d...

Polymyxin B effects on motility parameters of cryopreserved bull semen

Directory of Open Access Journals (Sweden)

Mojtaba Rashedi

2017-01-01

Full Text Available Objective: To evaluate the effect of adding different values of polymyxin B (PMB to bull semen on various motility parameters of post-thawed semen such as total motility, progressive motility and velocity parameters using kinetic parameters of sperm by Computer Assisted Sperm Analysis.Methods: Gram negative bacteria release lipopolysaccharide, which induces the apoptotic pathway. Antibiotics are added to semen in order to prevent bacterial contaminations in bovine semen. These antibiotics kill the bacteria especially gram negative bacteria. Therefore, their endotoxins are released during bacteriolysis and bind to the head region and midpiece of sperm. PMB is a bactericidal antibiotic against multidrug resistant gram-negative bacteria and is able to neutralize the toxic effects of the released endotoxin. This study was performed on 3-year old Taleshi bulls.Results: The results showed both positive and negative significant effects of PMB on semen quality. Total motility and progressive motility were significantly increased (P<0.000 1 by 100 μg per mL of PMB (55.2% and 48.8% respectively against the control groups (43.5% and 37.7%, respectively. Moreover, they were significantly decreased (P<0.000 1 by 1 000 μg per mL of PMB (35.2% and 28.8% respectively against the control groups (43.5% and 37.7% respectively in above-mentioned parameters. In Computer Assisted Semen Analyzer, parameter VAP was significantly decreased (P<0.04 in 1 000 μg (69.6 μm/s against the control group (78.7 μm/s. Finally, using PMB in processing cryopreserved bull semen is advised, but before using it, the rate of endotoxins must be measured.Conclusions: We advise using PMB after measuring endotoxin concentration; In vitro, in vivo and in field fertilization, adding other sperm evaluation factors such as acrosomal integrity, DNA integrity, mitochondrial function to PMB treated semen.

uleSIMS characterization of silver reference surfaces

Science.gov (United States)

Palitsin, V. V.; Dowsett, M. G.; Mata, B. Guzmán de la; Oloff, I. W.; Gibbons, R.

2006-07-01

Ultra low energy SIMS (uleSIMS) is a high sensitivity analytical technique that is normally used for ultra shallow profiling at a depth resolution of up to1 nm. This work describes the use of uleSIMS as both a spectroscopic and depth-profiling tool for the characterization of the early stages of corrosion formed on reference surfaces of silver. These samples are being developed to help with the characterization of tarnished surfaces in a cultural heritage context, and uleSIMS enables the tarnishing to be studied from its very earliest stages due to its high sensitivity (ppm-ppb) and surface specificity. We show that, uleSIMS can be used effectively to study the surface chemistry and aid the development of reference surfaces themselves. In particular, handling contaminants, surface dust, and residues from polishing are relatively easy to identify allowing them to be separated from the parts of the mass spectrum specific to the early stages of corrosion.

Direct infusion-SIM as fast and robust method for absolute protein quantification in complex samples

Directory of Open Access Journals (Sweden)

Christina Looße

2015-06-01

Full Text Available Relative and absolute quantification of proteins in biological and clinical samples are common approaches in proteomics. Until now, targeted protein quantification is mainly performed using a combination of HPLC-based peptide separation and selected reaction monitoring on triple quadrupole mass spectrometers. Here, we show for the first time the potential of absolute quantification using a direct infusion strategy combined with single ion monitoring (SIM on a Q Exactive mass spectrometer. By using complex membrane fractions of Escherichia coli, we absolutely quantified the recombinant expressed heterologous human cytochrome P450 monooxygenase 3A4 (CYP3A4 comparing direct infusion-SIM with conventional HPLC-SIM. Direct-infusion SIM revealed only 14.7% (±4.1 (s.e.m. deviation on average, compared to HPLC-SIM and a decreased processing and analysis time of 4.5 min (that could be further decreased to 30 s for a single sample in contrast to 65 min by the LC–MS method. Summarized, our simplified workflow using direct infusion-SIM provides a fast and robust method for quantification of proteins in complex protein mixtures.

Assessment of gastric motility using meal labeled with technetium-99m sulfur colloid

International Nuclear Information System (INIS)

Matolo, N.M.; Stadalnik, R.C.

1983-01-01

During a 2 year period, 83 patients with gastric motility problems were evaluated using radionuclide imaging. The patients presented with epigastric distress, postprandial fullness, pain, nausea, vomiting, and diarrhea; signs and symptoms suggestive of either gastroparesis or gastric outlet obstruction. Upper gastrointestinal series or endoscopy, or both, demonstrated no mechanical obstruction. After oral administration of a 300 g meal labeled with 600 muCi of technetium-99m sulfur colloid, a gastric emptying study consisting of serial images and data acquisition was performed. Of the patients studied, 52 had had peptic ulcer surgery, 17 were suspected of having gastroesophageal reflux, 8 were diabetic and suspected of having visceral enteropathy, and 6 had a history of irritable bowel syndrome. The normal mean gastric half emptying time was 77 +/- 16 minutes. Of the patients who had had gastric surgery, 90.4 percent had abnormal emptying: 69.2 percent had delayed gastric emptying and 21.2 percent had rapid gastric emptying time; 9.6 percent had normal emptying time. Of the gastroesophageal reflux group, all but two had normal gastric emptying time; 65 percent demonstrated gastroesophageal reflux within 15 minutes. Two of the patients with irritable bowel syndrome had prolonged emptying; the rest had normal emptying. All diabetic patients with gastroparesis had prolonged gastric emptying time, and all responded favorably to metoclopramide. Of the patients who previously had peptic ulcer surgery and had prolonged emptying time, 72 percent also responded favorably to metoclopramide. We conclude that radionuclide gastric imaging is a useful diagnostic test for the measurement of gastric emptying in patients with a variety of gastrointestinal motility disorders and may be helpful in assessing medical therapy and selecting those who may be candidates for surgery

Long-term distribution of Cs-137 in freshwater ecosystem and the effect of bioturbation on leakage of Cs-137 from the sediments

International Nuclear Information System (INIS)

Aquilonius, K.

1995-06-01

The first aim of the project was to make a literature compilation regarding Cs-137 in freshwater systems. Secondly, in order to follow up the long-term behaviour of Cs-137 in Lake Hillesjoen, sediment and water was sampled with respect to Cs-137. Finally, an experiment was done with chironomids, with the aim to assess the impact of bioturbation on the leakage of Cs-137 from the sediment, since this is one of the factors contributing to the uncertainties in radioecological models. Some aspects of long-term distribution of Cs-137 in freshwater lakes is discussed. In lake Hillesjoen the pool of Cs-137 in sediments (225 kBq/m 2 , 1993) has gradually increased since the Chernobyl accident, and now exceeds the initial deposition (100 kBq/m 2 ). The effect of bioturbation on the leakage from the sediment to the water could not be clarified in this experiment, but is discussed. 40 refs

Topochemical Analysis of Cell Wall Components by TOF-SIMS.

Science.gov (United States)

Aoki, Dan; Fukushima, Kazuhiko

2017-01-01

Time-of-flight secondary ion mass spectrometry (TOF-SIMS) is a recently developing analytical tool and a type of imaging mass spectrometry. TOF-SIMS provides mass spectral information with a lateral resolution on the order of submicrons, with widespread applicability. Sometimes, it is described as a surface analysis method without the requirement for sample pretreatment; however, several points need to be taken into account for the complete utilization of the capabilities of TOF-SIMS. In this chapter, we introduce methods for TOF-SIMS sample treatments, as well as basic knowledge of wood samples TOF-SIMS spectral and image data analysis.

Detection of SiO2 nanoparticles in lung tissue by ToF-SIMS imaging and fluorescence microscopy.

Science.gov (United States)

Veith, Lothar; Vennemann, Antje; Breitenstein, Daniel; Engelhard, Carsten; Wiemann, Martin; Hagenhoff, Birgit

2017-07-10

The direct detection of nanoparticles in tissues at high spatial resolution is a current goal in nanotoxicology. Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) is widely used for the direct detection of inorganic and organic substances with high spatial resolution but its capability to detect nanoparticles in tissue sections is still insufficiently explored. To estimate the applicability of this technique for nanotoxicological questions, comparative studies with established techniques on the detection of nanoparticles can offer additional insights. Here, we compare ToF-SIMS imaging data with sub-micrometer spatial resolution to fluorescence microscopy imaging data to explore the usefulness of ToF-SIMS for the detection of nanoparticles in tissues. SiO 2 nanoparticles with a mean diameter of 25 nm, core-labelled with fluorescein isothiocyanate, were intratracheally instilled into rat lungs. Subsequently, imaging of lung cryosections was performed with ToF-SIMS and fluorescence microscopy. Nanoparticles were successfully detected with ToF-SIMS in 3D microanalysis mode based on the lateral distribution of SiO 3 - (m/z 75.96), which was co-localized with the distribution pattern that was obtained from nanoparticle fluorescence. In addition, the lateral distribution of protein (CN - , m/z 26.00) and phosphate based signals (PO 3 - , m/z 78.96) originating from the tissue material could be related to the SiO 3 - lateral distribution. In conclusion, ToF-SIMS is suitable to directly detect and laterally resolve SiO 2 nanomaterials in biological tissue at sufficient intensity levels. At the same time, information about the chemical environment of the nanoparticles in the lung tissue sections is obtained.

Correlation of radiographic and manometric findings in patients with ineffective esophageal motility.

Science.gov (United States)

Shakespear, J S; Blom, D; Huprich, J E; Peters, J H

2004-03-01

Ineffective esophageal motility disorder (IEM) is a new, manometrically defined, esophageal motility disorder, associated with severe gastroesophageal reflux disease (GERD), GERD-associated respiratory symptoms, delayed acid clearance, and mucosal injury. Videoesophagram is an important, inexpensive, and widely available tool in the diagnostic evaluation of patients with esophageal pathologies. The efficacy of videoesophagography has not been rigorously examined in patients with IEM. The aim of this study was to determine the diagnostic value of videoesophagography in patients with IEM. The radiographic and manometric findings of 202 consecutive patients presenting with foregut symptoms were evaluated. IEM was defined by strict manometric criteria. All other named motility disorders such as achalasia were excluded. Videoesophagography was performed according to a standard protocol. Of patients in this cohort, 16% (33/202) had IEM by manometric criteria. Of IEM patients, 55% (18/33) had an abnormal videoesophagram, while in 45% (15/33) this test was read as normal. Only 11% (15/137) of patients with a normal videoesophagram were found to have IEM. Sensitivity of videoesophagram was 54.6%, specificity 72.2%, positive predictive value only 27.7%, and negative predictive value 89.1% in the diagnosis of IEM. These data show that videoesophagram is relatively insensitive in detecting patients with IEM and should not be considered a valid diagnostic test for this disorder. We conclude that esophageal manometry is an indispensable diagnostic modality in the workup of a patient with suspected of IEM.

Enhanced sensitivity to neoplastic transformation by 137Cs γ-rays of cells in the G2-/M-phase age interval

International Nuclear Information System (INIS)

Cao, J.; Wells, R.L.; Elkind, M.M.

1992-01-01

C3H mouse 10T1/2 cells, exposed to low doses of fission-spectrum neutrons, have an enhanced frequency of neoplastic transformation if protracted exposures are used (Hill et al. 1982, 1984a, 1985). To explain this anormaly, a biophysical model was proposed (Elkind 1991 a,b). The unique shape and radiobiological properties of cells in and around mitosis, led to the proposal that the sensitive window is mitosis and possible cells just preceding or just following M phase (Elkind 1991a,b). This study was undertaken using 137 Cs γ-rays. The authors found that late G 2- to M-phase 10T1/2 cells have a maximal sensitivity to neoplastic transformation as well as to killing by 137 Cs γ-rays. (author)

Effects of environment factors on initiation of sperm motility in sea cucumber Apostichopus japonicus (Selenka)

Science.gov (United States)

Yu, Li; Shao, Mingyu; Bao, Zhenmin; Hu, Jingjie; Zhang, Zhifeng

2011-06-01

Sperm of sea cucumber Apostichopus japonicus (Selenka) were quiescent in electrolyte NaCl solution and artificial seawater (ASW) and nonelectrolyte glucose and mannitol solutions when the osmolality was less than 200 mOsm kg-1. The sperm started to be motile as a result of increased osmolality, indicating an osmolality-dependent initiation of sperm motility in sea cucumber. After a brief incubation in hypotonic NaCl and glucose solutions with osmolalities of 200 and 400 mOsm kg-1, sperm lost partial motile ability. Sperm became immobilized when pH was 6.0 in NaCl, glucose and mannitol solutions, suggesting that an H+ release is involved in sperm activation. The decreased pH had no effect on the percentage of motile sperm in ASW, whereas it delayed the time period to reach the maximum motility (motilitymax). Extracellular Ca2+ in electrolyte solutions was not essential for motility stimulation but shortened the time of reaching motilitymax. When Ca2+ was mixed in nonelectrolyte solutions the sperm motility was completely suppressed. The K+ channel blocker, quinine, suppressed the sperm motility in electrolyte solution, showing a possible involvement of K+ transport in the process. High K+ concentration did not affect the sperm motility in NaCl solution, but decreased it in ASW and almost entirely suppressed it in nonelectrolyte solutions. The different effects of pH and K+ in ASW and NaCl solution indicate that external ions may also regulate sperm motility.

A protein secretion system linked to bacteroidete gliding motility and pathogenesis

Science.gov (United States)

Sato, Keiko; Naito, Mariko; Yukitake, Hideharu; Hirakawa, Hideki; Shoji, Mikio; McBride, Mark J.; Rhodes, Ryan G.; Nakayama, Koji

2009-01-01

Porphyromonas gingivalis secretes strong proteases called gingipains that are implicated in periodontal pathogenesis. Protein secretion systems common to other Gram-negative bacteria are lacking in P. gingivalis, but several proteins, including PorT, have been linked to gingipain secretion. Comparative genome analysis and genetic experiments revealed 11 additional proteins involved in gingipain secretion. Six of these (PorK, PorL, PorM, PorN, PorW, and Sov) were similar in sequence to Flavobacterium johnsoniae gliding motility proteins, and two others (PorX and PorY) were putative two-component system regulatory proteins. Real-time RT-PCR analysis revealed that porK, porL, porM, porN, porP, porT, and sov were down-regulated in P. gingivalis porX and porY mutants. Disruption of the F. johnsoniae porT ortholog resulted in defects in motility, chitinase secretion, and translocation of a gliding motility protein, SprB adhesin, to the cell surface, providing a link between a unique protein translocation system and a motility apparatus in members of the Bacteroidetes phylum. PMID:19966289

Low-energy electron microdosimetry of CS-137

International Nuclear Information System (INIS)

Paschoa, A.S.; Wrenn, M.E.

1980-09-01

The mass of tissue irradiated by an internal emitter depends upon the distribution of the radionuclide within the organism and the type of radiation emitted. The range (95% absorption) of low-energy electron effectively defines the sensitive volume in which the energy of the emitted electron is deposited. Accordingly, in the case of Auger electron microdosimetry of internal emitters the correct definition of the sensitive volume is of paramount importance. The amount of energy delivered by the monoenergetic electrons emitted by the decay system 137 Cs → sup(137m)Ba to spherical volumes of water-like tissue media of radii equivalent to the estimated ranges of those electrons in water is calculated and discussed as far as the variations of the estimated ranges of electrons as a function of the initial energy of emission are concerned. Although there are still many uncertainties on the actual ranges of low-energy electrons, one can state confidently that the ranges of the Auger electrons of the decay system 137 Cs → 137 sup(m) Ba → 137 Ba can be considered to be in the same order of magnitude of the diameter of a cell. The energy deposition in spherical volumes of water-like tissue media, considered equivalent to the sensitive volumes for the Auger electrons of the decay system 137 Cs → 137 sub(m) Ba → 137 Ba, range for several orders of magnitude from 10 2 to about 10 10 times higher than the energy deposition in similar media by the internal conversion electrons of this decay system. If equivalent variations of energy deposition per unit mass occur when the masses considered are cellular, and subcellular structures, then the effects into the sensitive volume should be taken into biological consideration as far as the microdosimetry of low-energy electrons (approximately equal to 10 keV) is considered, whenever there is internal localization of Auger emitters. (Author) [pt

Novel roles of formin mDia2 in lamellipodia and filopodia formation in motile cells.

Directory of Open Access Journals (Sweden)

Changsong Yang

2007-11-01

Full Text Available Actin polymerization-driven protrusion of the leading edge is a key element of cell motility. The important actin nucleators formins and the Arp2/3 complex are believed to have nonoverlapping functions in inducing actin filament bundles in filopodia and dendritic networks in lamellipodia, respectively. We tested this idea by investigating the role of mDia2 formin in leading-edge protrusion by loss-of-function and gain-of-function approaches. Unexpectedly, mDia2 depletion by short interfering RNA (siRNA severely inhibited lamellipodia. Structural analysis of the actin network in the few remaining lamellipodia suggested an mDia2 role in generation of long filaments. Consistently, constitutively active mDia2 (DeltaGBD-mDia2 induced accumulation of long actin filaments in lamellipodia and increased persistence of lamellipodial protrusion. Depletion of mDia2 also inhibited filopodia, whereas expression of DeltaGBD-mDia2 promoted their formation. Correlative light and electron microscopy showed that DeltaGBD-mDia2-induced filopodia were formed from lamellipodial network through gradual convergence of long lamellipodial filaments into bundles. Efficient filopodia induction required mDia2 targeting to the membrane, likely through a scaffolding protein Abi1. Furthermore, mDia2 and Abi1 interacted through the N-terminal regulatory sequences of mDia2 and the SH3-containing Abi1 sequences. We propose that mDia2 plays an important role in formation of lamellipodia by nucleating and/or protecting from capping lamellipodial actin filaments, which subsequently exhibit high tendency to converge into filopodia.

pH controls spermatozoa motility in the Pacific oyster (Crassostrea gigas

Directory of Open Access Journals (Sweden)

Myrina Boulais

2018-03-01

Full Text Available Investigating the roles of chemical factors stimulating and inhibiting sperm motility is required to understand the mechanisms of spermatozoa movement. In this study, we described the composition of the seminal fluid (osmotic pressure, pH, and ions and investigated the roles of these factors and salinity in initiating spermatozoa movement in the Pacific oyster, Crassostrea gigas. The acidic pH of the gonad (5.82±0.22 maintained sperm in the quiescent stage and initiation of flagellar movement was triggered by a sudden increase of spermatozoa external pH (pHe when released in seawater (SW. At pH 6.4, percentage of motile spermatozoa was three times higher when they were activated in SW containing 30 mM NH4Cl, which alkalinizes internal pH (pHi of spermatozoa, compared to NH4Cl-free SW, revealing the role of pHi in triggering sperm movement. Percentage of motile spermatozoa activated in Na+-free artificial seawater (ASW was highly reduced compared to ASW, suggesting that change of pHi triggering sperm motility was mediated by a Na+/H+ exchanger. Motility and swimming speed were highest in salinities between 33.8 and 42.7‰ (within a range of 0 to 50 ‰, and pH values above 7.5 (within a range of 4.5 to 9.5.

Analysis of TOF-SIMS spectra from fullerene compounds

Energy Technology Data Exchange (ETDEWEB)

Kato, N. [Department of Materials and Life Science, Faculty of Science and Technology, Seikei University, 3-3-1, Kichijoji-Kitamachi, Musashino-shi, Tokyo 180-8633 (Japan)], E-mail: kato-nobuhiko@st.seikei.ac.jp; Yamashita, Y. [Department of Materials and Life Science, Faculty of Science and Technology, Seikei University, 3-3-1, Kichijoji-Kitamachi, Musashino-shi, Tokyo 180-8633 (Japan); Iida, S.; Sanada, N. [ULVAC-PHI, Inc., 370 Enzo, Chigasaki, Kanagawa 253-0084 (Japan); Kudo, M. [Department of Materials and Life Science, Faculty of Science and Technology, Seikei University, 3-3-1, Kichijoji-Kitamachi, Musashino-shi, Tokyo 180-8633 (Japan)

2008-12-15

We analyzed TOF-SIMS spectra obtained from three different size of fullerenes (C{sub 60}, C{sub 70} and C{sub 84}) by using Ga{sup +}, Au{sup +} and Au{sub 3}{sup +} primary ion beams and investigated the fragmentation patterns, the enhancement of secondary ion yields and the restraint of fragmentation by using cluster primary ion beams compared with monoatomic primary ion beams. In the TOS-SIMS spectra from C{sub 70} and C{sub 84}, it was found that a fragment ion, identified as C{sub 60}{sup +} (m/z = 720), showed a relatively high intensity compared with that of other fragment ions related to C{sub 2} depletion. It was also found that the Au{sub 3}{sup +} bombardment caused intensity enhancement of intact molecules (C{sub 60}{sup +}, C{sub 70}{sup +} and C{sub 84}{sup +}) and restrained the fragmentation due to C{sub 2} depletion.

Estimate of oxygen consumption and intracellular zinc concentration of human spermatozoa in relation to motility.

Science.gov (United States)

Henkel, Ralf R; Defosse, Kerstin; Koyro, Hans-Wilhelm; Weissmann, Norbert; Schill, Wolf-Bernhard

2003-03-01

To investigate the human sperm oxygen/energy consumption and zinc content in relation to motility. In washed spermatozoa from 67 ejaculates, the oxygen consumption was determined. Following calculation of the total oxygen consumed by the Ideal Gas Law, the energy consumption of spermatozoa was calculated. In addition, the zinc content of the sperm was determined using an atomic absorption spectrometer. The resulting data were correlated to the vitality and motility. The oxygen consumption averaged 0.24 micromol/10(6) sperm x 24h, 0.28 micromol/10(6) live sperm x 24h and 0.85 micromol/10(6) live motile sperm x 24h. Further calculations revealed that sperm motility was the most energy consuming process (164.31 mJ/10(6) motile spermatozoa x 24h), while the oxygen consumption of the total spermatozoa was 46.06 mJ/10(6) spermatozoa x 24h. The correlation of the oxygen/energy consumption and zinc content with motility showed significant negative correlations (r= -0.759; P<0.0001 and r=-0.441; P<0.0001, respectively). However, when correlating sperm energy consumption with the zinc content, a significant positive relation (r=0.323; P=0.01) was observed. Poorly motile sperm are actually wasting the available energy. Moreover, our data clearly support the "Geometric Clutch Model" of the axoneme function and demonstrate the importance of the outer dense fibers for the generation of sperm motility, especially progressive motility.

The extremely high 137Cs inventory in the Sulu Sea: a possible mechanism

International Nuclear Information System (INIS)

Yamada, Masatoshi; Wang Zhongliang; Zheng Jian

2006-01-01

Large-volume seawater samples were collected in the Sulu and South China Seas and their 137 Cs activities were determined by γ-ray spectrometry using a low background type high-purity Ge detector. Vertical distributions of 137 Cs activity showed an exponential decrease in the South China Sea, whereas a subsurface maximum at 200 m depth and monotonic decrease below 300 m were observed in the Sulu Sea. A significant difference in intermediate water 137 Cs activities in the 500-2000 m depth was observed between the Sulu and South China Seas, i.e., the 137 Cs activities in the Sulu Sea were remarkably higher than those in the South China Sea. The difference in the 137 Cs inventory below 500 m was ∼1200 Bq m -2 between the Sulu and South China Seas. The 137 Cs total inventory of 3200 Bq m -2 in the Sulu Sea was 5.7 times higher than that expected from global fallout. A possible mechanism controlling this extremely high 137 Cs total inventory may be inflows of the 137 Cs rich water masses through the Luzon Strait, lateral transport across the Mindoro Strait into the Sulu Sea, and then subduction into the deep layer in the basin

Improved quantitative analysis of Cu(In,Ga)Se{sub 2} thin films using MCs{sup +}-SIMS depth profiling

Energy Technology Data Exchange (ETDEWEB)

Lee, Jihye; Kim, Seon Hee; Lee, Kang-Bong; Lee, Yeonhee [Korea Institute of Science and Technology, Advanced Analysis Center, Seoul (Korea, Republic of); Min, Byoung Koun [Korea Institute of Science and Technology, Clean Energy Research Center, Seoul (Korea, Republic of)

2014-06-15

The chalcopyrite semiconductor, Cu(InGa)Se{sub 2} (CIGS), is popular as an absorber material for incorporation in high-efficiency photovoltaic devices because it has an appropriate band gap and a high absorption coefficient. To improve the efficiency of solar cells, many research groups have studied the quantitative characterization of the CIGS absorber layers. In this study, a compositional analysis of a CIGS thin film was performed by depth profiling in secondary ion mass spectrometry (SIMS) with MCs{sup +} (where M denotes an element from the CIGS sample) cluster ion detection, and the relative sensitivity factor of the cluster ion was calculated. The emission of MCs{sup +} ions from CIGS absorber elements, such as Cu, In, Ga, and Se, under Cs{sup +} ion bombardment was investigated using time-of-flight SIMS (TOF-SIMS) and magnetic sector SIMS. The detection of MCs{sup +} ions suppressed the matrix effects of varying concentrations of constituent elements of the CIGS thin films. The atomic concentrations of the CIGS absorber layers from the MCs{sup +}-SIMS exhibited more accurate quantification compared to those of elemental SIMS and agreed with those of inductively coupled plasma atomic emission spectrometry. Both TOF-SIMS and magnetic sector SIMS depth profiles showed a similar MCs{sup +} distribution for the CIGS thin films. (orig.)

Cell Motility

CERN Document Server

Lenz, Peter

2008-01-01

Cell motility is a fascinating example of cell behavior which is fundamentally important to a number of biological and pathological processes. It is based on a complex self-organized mechano-chemical machine consisting of cytoskeletal filaments and molecular motors. In general, the cytoskeleton is responsible for the movement of the entire cell and for movements within the cell. The main challenge in the field of cell motility is to develop a complete physical description on how and why cells move. For this purpose new ways of modeling the properties of biological cells have to be found. This long term goal can only be achieved if new experimental techniques are developed to extract physical information from these living systems and if theoretical models are found which bridge the gap between molecular and mesoscopic length scales. Cell Motility gives an authoritative overview of the fundamental biological facts, theoretical models, and current experimental developments in this fascinating area.

Performance of BICM-based QAM-SIM OWC over gamma-gamma turbulence channels

KAUST Repository

Malik, Muhammad Talha; Hossain, Md Jahangir; Cheng, Julian; Alouini, Mohamed-Slim

2015-01-01

We derive a series expression for the pair-wise error probability (PEP) of bit interleaved coded modulation (BICM)-based subcarrier intensity modulation (SIM) optical wireless communication (OWC) system employing M^{2}-ary quadrature amplitude

Measuring Borrelia burgdorferi Motility and Chemotaxis.

Science.gov (United States)

Zhang, Kai; Li, Chunhao

2018-01-01

Swimming plate, cell motion tracking, and capillary tube assays are very useful tools to quantitatively measure bacterial motility and chemotaxis. These methods were modified and applied to study Borrelia burgdorferi motility and chemotaxis. By using these methods, numerous motility and chemotaxis mutants have been characterized and several chemoattractants were identified. With the assistance of these tools, the role of motility and chemotaxis in the pathogenicity of B. burgdorferi has been established. In addition, these tools also facilitate the study of motility and chemotaxis in other spirochetes.

The effect of cations on sperm motility performance and fertilizing ability of silver carp Hypophtalmychtis molitrix

Directory of Open Access Journals (Sweden)

Khara H.

2012-01-01

Full Text Available The objective of the study was to investigate the effect of saline solution containing cations (Na+, K+, Ca+2, Mg+2 on sperm motility performance (duration of sperm motility and percentage of motile spermatozoa and fertilizing capacity of sperm (fertilization rate, hatching rate, larvae length during hatching, larvae length during active feeding and survival rate in silver carp. The results suggested that solutions containing ions did not improve the duration of sperm motility. The same was observed for the percentage of motile spermatozoa. Fertilization rate influenced by solutions containing Ca+2, and other ions could not affect this parameter. The results showed that hatching rate was higher in solutions containing 99 mEq/L NaCl, 2 mEq/L MgCl2 and 2, 4 mEq/L CaCl2 respectively. Also, survival rate was higher in the solution containing 2 mEq/L MgCl2 and 36 mg/dL KCl respectively.With regard to the obtained results, it was concluded that using appropriate activation medium can improve quality of fish sperm and subsequently increases artificial reproduction performance.

Radioecological studies of 137Cs in limnological ecosystems. 137Cs concentrations in water, sediment and fishes at the pond in Saitama prefecture, Japan

International Nuclear Information System (INIS)

Miyake, Sadaaki; Motegi, Misako; Oosawa, Takashi; Nakazawa, Kiyoaki; Izumo, Yoshiro

1998-01-01

The concentrations of 137 Cs in water, sediment and fishes at the pond in Saitama prefecture were determined in order to elucidate the radioecology of 137 Cs in limnological ecosystems. 137 Cs concentration in water was 0.31±0.002 mBq/l (mean±standard error), and so indicated about 3 times higher than that (0.10 mBq/l) for the river in our previous report. 137 Cs concentrations in sediment, carp, Cyprinus carpio, crucian carp, Carassius auratus cuvieri, and Hakuren, Hypophthalmichthys molitrix, were about 20000, 1200, 2400 and 3100 times higher than that of the water, respectively. These concentrations were higher than those of each sample for the river in our previous report. It was so suggested that 137 Cs tended to be accumulated in these samples at the pond more than the nuclide in the river. Moreover, concentration ratios, concentration of 137 Cs in sediment, crucian carp and Hakuren to that of the water, were about 30, 2 and 3 times higher than these of 40 K, respectively, except for carp of which 137 Cs and 40 K concentration ratios were almost same. These results showed difference in accumulation mechanism between 137 Cs and 40 K in these samples, as well as 137 Cs transfer mechanism in the limnological ecosystems in part. (author)

Cesium-137 inventories in undisturbed areas in different regions of Brazil

Energy Technology Data Exchange (ETDEWEB)

Andrello, Avacir C.; Appoloni, Carlos R., E-mail: acandrello@uel.b [Universidade Estadual de Londrina, PR (Brazil). Dept. de Fisica; Araujo, Ednaldo S. [EMBRAPA Agrobiologia, Seropedica, RJ (Brazil); Thomaz, Edivaldo L. [Universidade Estadual do Centro-Oeste - UNICENTRO, Guarapuava, PR (Brazil). Dept. de Geografia; Medeiros, Pedro Henrique Augusto [Universidade Federal do Ceara (UFC), Fortaleza, CE (Brazil). Dept. de Engenharia Agricola; Macedo, Iris L. [Universidade de Brasilia (UnB), DF (Brazil). Faculdade de Tecnologia. Dept. de Engenharia Civil e Ambiental

2009-07-01

Cesium-137 is an anthropogenic radionuclide introduced in the environment in the early of 1960s to the end of 1970s. The Cesium-137 has very used to assess soil redistribution in the landscape because this is very tight in the fine soil particles and its movement in the landscape is due to soil redistribution. To use Cesium-137 to assess soil redistribution is need to known the Cesium-137 inventory in an area that not has experimented soil erosion neither soil deposition. So, this work present Cesium-137 inventories in undisturbed areas in different regions of Brazil, from South to Northeast of Brazil. The inventories in these areas represent the variational deposition of Cesium-137 in the whole national territory of Brazil. The inventories of Cesium-137 varied from 200 +- 15 Bq.m{sup -2} for South region to 15 +- 2 Bq.m{sup -2} for Northeast region. Moreover, was verified that the Cesium- 137 inventories depend on latitude and altitude of the area. (author)

Cesium-137 inventories in undisturbed areas in different regions of Brazil

International Nuclear Information System (INIS)

Andrello, Avacir C.; Appoloni, Carlos R.; Thomaz, Edivaldo L.; Medeiros, Pedro Henrique Augusto; Macedo, Iris L.

2009-01-01

Cesium-137 is an anthropogenic radionuclide introduced in the environment in the early of 1960s to the end of 1970s. The Cesium-137 has very used to assess soil redistribution in the landscape because this is very tight in the fine soil particles and its movement in the landscape is due to soil redistribution. To use Cesium-137 to assess soil redistribution is need to known the Cesium-137 inventory in an area that not has experimented soil erosion neither soil deposition. So, this work present Cesium-137 inventories in undisturbed areas in different regions of Brazil, from South to Northeast of Brazil. The inventories in these areas represent the variational deposition of Cesium-137 in the whole national territory of Brazil. The inventories of Cesium-137 varied from 200 ± 15 Bq.m -2 for South region to 15 ± 2 Bq.m -2 for Northeast region. Moreover, was verified that the Cesium- 137 inventories depend on latitude and altitude of the area. (author)

Primary Esophageal Motility Disorders: Beyond Achalasia.

Science.gov (United States)

Schlottmann, Francisco; Patti, Marco G

2017-06-30

The best-defined primary esophageal motor disorder is achalasia. However, symptoms such as dysphagia, regurgitation and chest pain can be caused by other esophageal motility disorders. The Chicago classification introduced new manometric parameters and better defined esophageal motility disorders. Motility disorders beyond achalasia with the current classification are: esophagogastric junction outflow obstruction, major disorders of peristalsis (distal esophageal spasm, hypercontractile esophagus, absent contractility) and minor disorders of peristalsis (ineffective esophageal motility, fragmented peristalsis). The aim of this study was to review the current diagnosis and management of esophageal motility disorders other than achalasia.

Biochemical imaging of tissues by SIMS for biomedical applications

International Nuclear Information System (INIS)

Lee, Tae Geol; Park, Ji-Won; Shon, Hyun Kyong; Moon, Dae Won; Choi, Won Woo; Li, Kapsok; Chung, Jin Ho

2008-01-01

With the development of optimal surface cleaning techniques by cluster ion beam sputtering, certain applications of SIMS for analyzing cells and tissues have been actively investigated. For this report, we collaborated with bio-medical scientists to study bio-SIMS analyses of skin and cancer tissues for biomedical diagnostics. We pay close attention to the setting up of a routine procedure for preparing tissue specimens and treating the surface before obtaining the bio-SIMS data. Bio-SIMS was used to study two biosystems, skin tissues for understanding the effects of photoaging and colon cancer tissues for insight into the development of new cancer diagnostics for cancer. Time-of-flight SIMS imaging measurements were taken after surface cleaning with cluster ion bombardment by Bi n or C 60 under varying conditions. The imaging capability of bio-SIMS with a spatial resolution of a few microns combined with principal component analysis reveal biologically meaningful information, but the lack of high molecular weight peaks even with cluster ion bombardment was a problem. This, among other problems, shows that discourse with biologists and medical doctors are critical to glean any meaningful information from SIMS mass spectrometric and imaging data. For SIMS to be accepted as a routine, daily analysis tool in biomedical laboratories, various practical sample handling methodology such as surface matrix treatment, including nano-metal particles and metal coating, in addition to cluster sputtering, should be studied

Binding properties of SUMO-interacting motifs (SIMs) in yeast.

Science.gov (United States)

Jardin, Christophe; Horn, Anselm H C; Sticht, Heinrich

2015-03-01

Small ubiquitin-like modifier (SUMO) conjugation and interaction play an essential role in many cellular processes. A large number of yeast proteins is known to interact non-covalently with SUMO via short SUMO-interacting motifs (SIMs), but the structural details of this interaction are yet poorly characterized. In the present work, sequence analysis of a large dataset of 148 yeast SIMs revealed the existence of a hydrophobic core binding motif and a preference for acidic residues either within or adjacent to the core motif. Thus the sequence properties of yeast SIMs are highly similar to those described for human. Molecular dynamics simulations were performed to investigate the binding preferences for four representative SIM peptides differing in the number and distribution of acidic residues. Furthermore, the relative stability of two previously observed alternative binding orientations (parallel, antiparallel) was assessed. For all SIMs investigated, the antiparallel binding mode remained stable in the simulations and the SIMs were tightly bound via their hydrophobic core residues supplemented by polar interactions of the acidic residues. In contrary, the stability of the parallel binding mode is more dependent on the sequence features of the SIM motif like the number and position of acidic residues or the presence of additional adjacent interaction motifs. This information should be helpful to enhance the prediction of SIMs and their binding properties in different organisms to facilitate the reconstruction of the SUMO interactome.

Decorporation of cesium-137; Decorporation du cesium-137

Energy Technology Data Exchange (ETDEWEB)

Le Fleche, Ph; Destombe, C; Grasseau, A; Mathieu, J; Chancerelle, Y; Mestries, J C [GMR, Direction des Recherches, Etudes et Techniques, 94 - Arcueil (France)

1998-12-31

Cesium radio-isotopes, especially cesium-137 ({sup 137}Cs) are among the radionuclides of main importance produced by a fission reaction in reactor or a nuclear weapon explosion. In the environment, {sup 137}Cs is a major contaminant which can cause severe {beta}, {gamma}irradiations and contaminations. {sup 137}Cs is distributed widely and relatively uniformly throughout the body with the highest concentration in skeletal muscles. A treatment becomes difficult afterwards. The purposes of this report are Firstly to compare the Prussian blue verses cobalt and potassium ferrocyanide (D.I. blue) efficiency for the {sup 137}Cs decorporation and secondly to assess a chronological treatment with D.I. blue. (author)

Decorporation of cesium-137; Decorporation du cesium-137

Energy Technology Data Exchange (ETDEWEB)

Le Fleche, Ph.; Destombe, C.; Grasseau, A.; Mathieu, J.; Chancerelle, Y.; Mestries, J.C. [GMR, Direction des Recherches, Etudes et Techniques, 94 - Arcueil (France)

1997-12-31

Cesium radio-isotopes, especially cesium-137 ({sup 137}Cs) are among the radionuclides of main importance produced by a fission reaction in reactor or a nuclear weapon explosion. In the environment, {sup 137}Cs is a major contaminant which can cause severe {beta}, {gamma}irradiations and contaminations. {sup 137}Cs is distributed widely and relatively uniformly throughout the body with the highest concentration in skeletal muscles. A treatment becomes difficult afterwards. The purposes of this report are Firstly to compare the Prussian blue verses cobalt and potassium ferrocyanide (D.I. blue) efficiency for the {sup 137}Cs decorporation and secondly to assess a chronological treatment with D.I. blue. (author)

Soil 137Cs background values in monsoon region of china

International Nuclear Information System (INIS)

Zhang Mingli; Yang Hao; Wang Xiaolei; Wang Yihong; Xu Congan; Yang Jiudong; Rong Jing

2009-01-01

Land degradation,, which is resulted from the soil erosion, is one of the major environmental problems. It severely affects the food supplies, environmental safety and the sustainable development in China. Some areas in the monsoon region are suffering from the acute soil erosion. To find out the degree of soil erosion, the proven technique of 137 Cs tracer is definitely one of the best methods, and the key is to ascertain the accuracy of soil 137 Cs background value. The distributions of 137 Cs were explored in soil profiles by detecting the 137 Cs of soil cores from the Yimeng mountain area in Shandong Province, hills in the southern area of Jiangsu Province and Dianchi catchment in Yunnan Province, respectively. We found that the depth of 137 Cs distribution is not the same in the soils of various areas. But the 137 Cs activity shows an exponential distribution in the uncultivated soil and demonstrates a strong correlation with the soil depth, while the 137 Cs activity proves uniform in the soil plowing layer of the cultivated land. The study shows the 137 Cs background values of three areas: 1737.1 Bq/m 2 in Yimeng mountain area, 1847.6 Bq/m 2 in southern area of hills in Jiangsu, 918.0 Bq/m 2 in Dianchi catchment. The certainty of 137 Cs background value can technically support the use of 137 Cs technique to study the spatial pattern of soil erosion, deposition and the land degradation, which provides the support for the sustainable utilization of soil resource, the assessment of economical benefit and loss and the evaluation of water and soil conservation measures. (authors)

Look@NanoSIMS--a tool for the analysis of nanoSIMS data in environmental microbiology.

Science.gov (United States)

Polerecky, Lubos; Adam, Birgit; Milucka, Jana; Musat, Niculina; Vagner, Tomas; Kuypers, Marcel M M

2012-04-01

We describe an open-source freeware programme for high throughput analysis of nanoSIMS (nanometre-scale secondary ion mass spectrometry) data. The programme implements basic data processing and analytical functions, including display and drift-corrected accumulation of scanned planes, interactive and semi-automated definition of regions of interest (ROIs), and export of the ROIs' elemental and isotopic composition in graphical and text-based formats. Additionally, the programme offers new functions that were custom-designed to address the needs of environmental microbiologists. Specifically, it allows manual and automated classification of ROIs based on the information that is derived either from the nanoSIMS dataset itself (e.g. from labelling achieved by halogen in situ hybridization) or is provided externally (e.g. as a fluorescence in situ hybridization image). Moreover, by implementing post-processing routines coupled to built-in statistical tools, the programme allows rapid synthesis and comparative analysis of results from many different datasets. After validation of the programme, we illustrate how these new processing and analytical functions increase flexibility, efficiency and depth of the nanoSIMS data analysis. Through its custom-made and open-source design, the programme provides an efficient, reliable and easily expandable tool that can help a growing community of environmental microbiologists and researchers from other disciplines process and analyse their nanoSIMS data. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

Elemental and isotopic imaging of biological samples using NanoSIMS.

Science.gov (United States)

Kilburn, Matt R; Clode, Peta L

2014-01-01

With its low detection limits and the ability to analyze most of the elements in the periodic table, secondary ion mass spectrometry (SIMS) represents one of the most versatile in situ analytical techniques available, and recent developments have resulted in significant advantages for the use of imaging mass spectrometry in biological and biomedical research. Increases in spatial resolution and sensitivity allow detailed interrogation of samples at relevant scales and chemical concentrations. Advances in dynamic SIMS, specifically with the advent of NanoSIMS, now allow the tracking of stable isotopes within biological systems at subcellular length scales, while static SIMS combines subcellular imaging with molecular identification. In this chapter, we present an introduction to the SIMS technique, with particular reference to NanoSIMS, and discuss its application in biological and biomedical research.

Installation of a shielded SIMS in CEA Cadarache

International Nuclear Information System (INIS)

Desgranges, L.; Pasquet, B.; Rasser, B.

2002-01-01

A shielded SIMS 6f has been installed in the LECA in 1999 and will examine nuclear fuels before the end of this year. Meanwhile several studies have been realised to test its technical performance for nuclear materials analysis. After a brief presentation of the design of the shielded SIMS, five examples of preliminary results will be underlined. In the nuclear field, SIMS is currently used for the analysis of Zircaloy cladding corrosion because it can detect light elements like boron or lithium. More than a quantitative measurement of isotopes, it was possible with our SIMS to produce a two dimension image of the corrosion layer focusing on the protective layer. SIMS has also the advantage to detect isotopes with a low concentration. This property will be enlightened with some results obtained on sulphur in UO 2 . Because SIMS uses the erosion of the sample surface, it is possible to make depth profile. This possibility will be demonstrated on water altered glass samples on which the altered layer will be evidenced on depth profile. The last application of SIMS presented in the paper is addressed to nuclear fuel with detection of xenon. Fission gases release is indeed of first importance for nuclear fuel because it affects fuel swelling, rod internal pressure, fuel thermal conductivity via the formation of pores etc. We have demonstrated that it was possible to measure xenon on an unirradiated UO 2 sample implanted with xenon. It was also proved that xenon could be measured in gaseous state, which would make possible the measurement of xenon filling pores. (author)

Comparison on the calibrations of hydrometers for liquids density determination between SIM laboratories

Science.gov (United States)

Morales, Abed; Quiroga, Aldo; Daued, Arturo; Cantero, Diana; Sequeira, Francisco; Castro, Luis Carlos; Becerra, Luis Omar; Salazar, Manuel; Vega, Maria

2017-01-01

A supplementary comparison was made between SIM laboratories concerning the calibration of four hydrometers within the range of 600 kg/m3 to 2000 kg/m3. The main objectives of the comparison were to evaluate the degree of equivalences SIM NMIs in the calibration of hydrometers of high accuracy. The participant NMIs were: CENAM, IBMETRO, INEN, INDECOPI, INM, INTN and LACOMET. Main text To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCM, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

Contribution of Asian dust to atmospheric deposition of radioactive cesium (137Cs)

International Nuclear Information System (INIS)

Fukuyama, Taijiro; Fujiwara, Hideshi

2008-01-01

Both Asian dust (kosa) transported from the East Asian continent and locally suspended dust near monitoring sites contribute to the observed atmospheric deposition of 137 Cs in Japan. To estimate the relative contribution of these dust phenomena to the total 137 Cs deposition, we monitored weekly deposition of mineral particles and 137 Cs in spring. Deposition of 137 Cs from a single Asian dust event was 62.3 mBq m -2 and accounted for 67% of the total 137 Cs deposition during the entire monitoring period. Furthermore, we found high 137 Cs specific activity in the Asian dust deposition sample. Although local dust events contributed to 137 Cs deposition, their contribution was considerably smaller than that of Asian dust. We conclude that the primary source of atmospheric 137 Cs in Japan is dust transported from the East Asian continent

Caesium-137 distribution, inventories and accumulation history in the Baltic Sea sediments.

Science.gov (United States)

Zaborska, Agata; Winogradow, Aleksandra; Pempkowiak, Janusz

2014-01-01

The Baltic Sea is susceptible to pollution by hazardous substances due to limited water exchange, shallowness, and the large catchment area. Radionuclides, particularly (137)Cs, are one of the most hazardous anthropogenic substances present in the Baltic environment. This study was conducted to present (137)Cs present contamination that should further be a subject of reliable monitoring when the new Nuclear Power Plant is put into operation in the northern Poland. The sea-wide, up to date distribution of (137)Cs activities and inventories in the Baltic Sea bottom sediments are presented. The (137)Cs activity concentrations were measured in 30 cm long sediment cores collected at 22 sampling stations. Sediment accumulation rates were quantified by (210)Pb geochronology to follow the history of (137)Cs accumulation. The (137)Cs inventories and fluxes were calculated. Most of the Baltic Sea sediments accumulated (137)Cs in the range from 750 to 2675 Bq m(-2). The Bothnian Bay is severely contaminated by (137)Cs with inventories up to 95,191 Bq m(-2). This region is moreover characterized by extremely large patchiness of (137)Cs inventories. The (137)Cs annual fluxes are highest at the two stations located at the Bothnian Bay (342 Bq m(-2) and 527 Bq m(-2)) due to large Chernobyl (137)Cs contamination of that region and high sediment accumulation rates. When these stations are excluded, the recent, annual mean value of (137)Cs load to the Baltic Sea deposits is 38 ± 22 Bq m(-2). The distribution of radio-caesium inventories over the Baltic Sea nowadays reflects the pattern of Chernobyl contamination. The radio-caesium deposited in surface sediments is not permanently buried, but may be resuspended and redeposited by currents, bioturbation or anthropogenic activities. Copyright © 2013 Elsevier Ltd. All rights reserved.

Radionuclide Esophageal Transit Study in the Esophageal Motility Disorders

Energy Technology Data Exchange (ETDEWEB)

Choi, Jae Gol; Lee, Min Jae; Song, Chi Wook [Korea University College of Medicine, Seoul (Korea, Republic of)

1993-07-15

Esophageal motility was evaluated from the analysis of 10 consecutive swallows using liquid bolus containing 0.5 mCi of {sup 99m}Tc tin colloid. We have reviewed our experience of esophageal transit study in the 20 normal volunteers and 55 patients with dysphagia that was not related to mechanical obstruction. The purpose of this study is to measure the esophageal transit in normal subjects and in patients with various esophageal motility disorders. The overall sensitivity and specificity of radionuclide esophageal transit study in detecting esophageal motor abnormality were compared with manometric results as a gold standard, which were 80% and 100% respectively. Radionuclide transit study is a safe, rapid, noninvasive test and suitable as a screening test for esophageal motor disorders.

Radionuclide Esophageal Transit Study in the Esophageal Motility Disorders

International Nuclear Information System (INIS)

Choi, Jae Gol; Lee, Min Jae; Song, Chi Wook

1993-01-01

Esophageal motility was evaluated from the analysis of 10 consecutive swallows using liquid bolus containing 0.5 mCi of 99m Tc tin colloid. We have reviewed our experience of esophageal transit study in the 20 normal volunteers and 55 patients with dysphagia that was not related to mechanical obstruction. The purpose of this study is to measure the esophageal transit in normal subjects and in patients with various esophageal motility disorders. The overall sensitivity and specificity of radionuclide esophageal transit study in detecting esophageal motor abnormality were compared with manometric results as a gold standard, which were 80% and 100% respectively. Radionuclide transit study is a safe, rapid, noninvasive test and suitable as a screening test for esophageal motor disorders.

Motility versus fluctuations in mixtures of self-motile and passive agents.

Science.gov (United States)

Hinz, Denis F; Panchenko, Alexander; Kim, Tae-Yeon; Fried, Eliot

2014-12-07

Many biological systems consist of self-motile and passive agents both of which contribute to overall functionality. However, little is known about the properties of such mixtures. Here we formulate a model for mixtures of self-motile and passive agents and show that the model gives rise to three different dynamical phases: a disordered mesoturbulent phase, a polar flocking phase, and a vortical phase characterized by large-scale counter rotating vortices. We use numerical simulations to construct a phase diagram and compare the statistical properties of the different phases with observed features of self-motile bacterial suspensions. Our findings afford specific insights regarding the interaction of microorganisms and passive particles and provide novel strategic guidance for efficient technological realizations of artificial active matter.

Acupuncture at heterotopic acupoints enhances jejunal motility in constipated and diarrheic rats

Science.gov (United States)

Qin, Qing-Guang; Gao, Xin-Yan; Liu, Kun; Yu, Xiao-Chun; Li, Liang; Wang, Hai-Ping; Zhu, Bing

2014-01-01

AIM: To investigate the effect and mechanism of acupuncture at heterotopic acupoints on jejunal motility, particularly in pathological conditions. METHODS: Jejunal motility was assessed using a manometric balloon placed in the jejunum approximately 18-20 cm downstream from the pylorus and filled with approximately 0.1 mL warm water in anesthetized normal rats or rats with diarrhea or constipation. The heterotopic acupoints including LI11 (Quchi), ST37 (Shangjuxu), BL25 (Dachangshu), and the homotopic acupoint ST25 (Tianshu), and were stimulated for 60 s by rotating acupuncture needles right and left at a frequency of 2 Hz. To determine the type of afferent fibers mediating the regulation of jejunal motility by manual acupuncture, the ipsilateral sciatic A or C fibers of ST37 were inactivated by local application of the A-fiber selective demyelination agent cobra venom or the C fiber blocker capsaicin. Methoctramine, a selective M2 receptor antagonist, was injected intravenously to identify a specific role for M2 receptors in mediating the effect of acupuncture on jejunal motility. RESULTS: Acupuncture at heterotopic acupoints, such as LI11 and ST37, increased jejunal motility not only in normal rats, but also in rats with constipation or diarrhea. In normal rats, manual acupuncture at LI11 or ST37 enhanced jejunal pressure from 7.34 ± 0.19 cmH2O to 7.93 ± 0.20 cmH2O, an increase of 9.05% ± 0.82% (P acupuncture at LI11 or ST37 increased intrajejunal pressure from 8.17 ± 0.31 cmH2O to 9.86 ± 0.36 cmH2O, an increase of 20.69% ± 2.10% (P 0.05), respectively. In contrast, acupuncture ST25, a homotopic acupoint, decreased not only intrajejunal pressure, but also significantly decreased frequency in normal rats and rats with constipation or diarrhea. Following demyelination of Aδ fibers, acupuncture at ST37 again augmented intrajejunal pressure to 121.48% ± 3.06% of baseline. Following capsaicin application for 24 h, acupuncture at ipsilateral ST37 increased

SIMS: addressing the problem of heterogeneity in databases

Science.gov (United States)

Arens, Yigal

1997-02-01

The heterogeneity of remotely accessible databases -- with respect to contents, query language, semantics, organization, etc. -- presents serious obstacles to convenient querying. The SIMS (single interface to multiple sources) system addresses this global integration problem. It does so by defining a single language for describing the domain about which information is stored in the databases and using this language as the query language. Each database to which SIMS is to provide access is modeled using this language. The model describes a database's contents, organization, and other relevant features. SIMS uses these models, together with a planning system drawing on techniques from artificial intelligence, to decompose a given user's high-level query into a series of queries against the databases and other data manipulation steps. The retrieval plan is constructed so as to minimize data movement over the network and maximize parallelism to increase execution speed. SIMS can recover from network failures during plan execution by obtaining data from alternate sources, when possible. SIMS has been demonstrated in the domains of medical informatics and logistics, using real databases.

Benchmarking Exercises To Validate The Updated ELLWF GoldSim Slit Trench Model

International Nuclear Information System (INIS)

Taylor, G. A.; Hiergesell, R. A.

2013-01-01

-on work using GoldSim to develop 1D equivalent models of the PORFLOW multi-dimensional models was justified. The comparison of GoldSim 1D equivalent models to PORFLOW multi-dimensional models was made at two locations in the model domains - at the unsaturated-saturated zone interface and at the 100m point of compliance. PORFLOW model results from the 2008 PA were utilized to investigate the comparison. By making iterative adjustments to certain water flux terms in the GoldSim models it was possible to produce contaminant mass fluxes and water concentrations that were highly similar to the PORFLOW model results at the two locations where comparisons were made. Based on the ability of the GoldSim 1D trench models to produce mass flux and concentration curves that are sufficiently similar to multi-dimensional PORFLOW models for all of the evaluated radionuclides and their progeny, it is concluded that the use of the GoldSim 1D equivalent Slit and Engineered trenches models for further probabilistic sensitivity and uncertainty analysis of ELLWF trench units is justified. A revision to the original report was undertaken to correct mislabeling on the y-axes of the compliance point concentration graphs, to modify the terminology used to define the ''blended'' source term Case for the saturated zone to make it consistent with terminology used in the 2008 PA, and to make a more definitive statement regarding the justification of the use of the GoldSim 1D equivalent trench models for follow-on probabilistic sensitivity and uncertainty analysis

Benchmarking Exercises To Validate The Updated ELLWF GoldSim Slit Trench Model

Energy Technology Data Exchange (ETDEWEB)

Taylor, G. A.; Hiergesell, R. A.

2013-11-12

-on work using GoldSim to develop 1D equivalent models of the PORFLOW multi-dimensional models was justified. The comparison of GoldSim 1D equivalent models to PORFLOW multi-dimensional models was made at two locations in the model domains - at the unsaturated-saturated zone interface and at the 100m point of compliance. PORFLOW model results from the 2008 PA were utilized to investigate the comparison. By making iterative adjustments to certain water flux terms in the GoldSim models it was possible to produce contaminant mass fluxes and water concentrations that were highly similar to the PORFLOW model results at the two locations where comparisons were made. Based on the ability of the GoldSim 1D trench models to produce mass flux and concentration curves that are sufficiently similar to multi-dimensional PORFLOW models for all of the evaluated radionuclides and their progeny, it is concluded that the use of the GoldSim 1D equivalent Slit and Engineered trenches models for further probabilistic sensitivity and uncertainty analysis of ELLWF trench units is justified. A revision to the original report was undertaken to correct mislabeling on the y-axes of the compliance point concentration graphs, to modify the terminology used to define the ''blended'' source term Case for the saturated zone to make it consistent with terminology used in the 2008 PA, and to make a more definitive statement regarding the justification of the use of the GoldSim 1D equivalent trench models for follow-on probabilistic sensitivity and uncertainty analysis.

Homocysteine is the confounding factor of metabolic syndrome-confirmed by siMS score.

Science.gov (United States)

Srećković, Branko; Soldatovic, Ivan; Colak, Emina; Mrdovic, Igor; Sumarac-Dumanovic, Mirjana; Janeski, Hristina; Janeski, Nenad; Gacic, Jasna; Dimitrijevic-Sreckovic, Vesna

2018-04-06

Abdominal adiposity has a central role in developing insulin resistance (IR) by releasing pro-inflammatory cytokines. Patients with metabolic syndrome (MS) have higher values of homocysteine. Hyperhomocysteinemia correlates with IR, increasing the oxidative stress. Oxidative stress causes endothelial dysfunction, hypertension and atherosclerosis. The objective of the study was to examine the correlation of homocysteine with siMS score and siMS risk score and with other MS co-founding factors. The study included 69 obese individuals (age over 30, body mass index [BMI] >25 kg/m2), classified into two groups: I-with MS (33 patients); II-without MS (36 patients). Measurements included: anthropometric parameters, lipids, glucose regulation parameters and inflammation parameters. IR was determined by homeostatic model assessment for insulin resistance (HOMA-IR). ATP III classification was applied for diagnosing MS. SiMS score was used as continuous measure of metabolic syndrome. A significant difference between groups was found for C-reactive protein (CRP) (psiMS risk score showed a positive correlation with homocysteine (p=0.023), while siMS score correlated positively with fibrinogen (p=0.013), CRP and acidum uricum (p=0.000) and homocysteine (p=0.08). Homocysteine correlated positively with ApoB (p=0.036), HbA1c (p=0.047), HOMA-IR (p=0.008) and negatively with ApoE (p=0.042). Correlation of siMS score with homocysteine, fibrinogen, CRP and acidum uricum indicates that they are co-founding factors of MS. siMS risk score correlation with homocysteine indicates that hyperhomocysteinemia increases with age. Hyperhomocysteinemia is linked with genetic factors and family nutritional scheme, increasing the risk for atherosclerosis.

Predicting the temporal relationship between soil cesium-137 and erosion rate

International Nuclear Information System (INIS)

Kachanoski, R.G.; De Jong, E.

1984-01-01

A model was developed that predicts the amount of 137 Cs remaining in soil as a function of time and erosion rate. The model accounts for atmospheric deposition, radioactive decay, tillage dilution, and erosion transport of 137 Cs, as well as seasonal differences in 137 Cs deposition and erosion rates. The model was used to estimate minimum resolution of erosion estimates based on detection limits and accuracy of 137 Cs measurement by gamma spectroscopy, as a function of time and erosion rate. The analysis showed that under Saskatchewan conditions, changes in 137 Cs at a given site can be used to estimate erosion rates between 0.5 and 10 kg m -2 yr -1 with reasonable precision, provided the sampling interval is at least 15 yr. The relationship of fraction of 137 Cs lost vs. erosion as predicted by the model was compared with other methods being used. The model was used to estimate erosion from selected Saskatchewan soils where 137 Cs levels were measured in 1966 and again in 1981. Erosion rates calculated with the model varied from 1 kg m -2 yr -1 for a sandy loam soil in continuous forage to 19 kg m -2 yr -1 for a similar soil in a crop-fallow rotation. Erosion estimates using the model were higher than those calculated by assuming that soil loss was directly proportional to 137 Cs loss, especially when 137 Cs loss was high

Testing CAN/CSA-N288.1-M87 (Air-to-forage-to-milk or -beef pathways for 131I and 137Cs and the water-to-fish and sediment pathways for 137Cs) against post-Chernobyl observations

International Nuclear Information System (INIS)

Peterson, S-R.

1993-05-01

The Canadian Standards Association's 'Guidelines for Calculating Derived Release Limits for Radioactive Material in Airborne and Liquid Effluents for Normal Operation of Nuclear Facilities' (CAN/CSA-N288.1-M87) is a steady-state chronic release model. Although it has been assumed that (because dose calculations involve several steps and because each step has some degree of conservatism) predictions usually should be conservative, the model had not been tested. An opportunity to test the model arose due to the activities of BIOMOVS (Biospheric Model Validation Study), which developed several scenarios with which to assess model performance. Each of these scenarios asked for predictions for several steps in the pathways studied (e.g., deposition, concentrations in forage and concentrations in milk or meat). The first of these, Scenario B1, was a chronic release over 30 years of 131 I and 137 Cs; predictions of CSA-N288.1-M87 have been compared with those of the sixteen models participating in the scenario. Scenario A4 was developed using world-wide 131 I and 137 Cs data from the Chernobyl accident, and from the following six months. Predictions made using CSA-N288.1-M87 were compared with observations. In addition, the results were compared with those of the 25 participating models. Finally, the model was used to calculate 137 Cs concentrations in water, sediment and fish in a Swedish lake for 18 months post-Chernobyl, for comparison with observations and other predictions. As assumed, most of the transfer parameters are conservative, so that the predictions are usually conservative for a source term of atmospheric 131 I. However, estimates of deposition for both 131 I and 137 Cs are not conservative, which has profound implications for estimating external dose. Furthermore, at some of the sites in the A4 Scenario, concentrations in milk and beef are underestimated for 137C s, which suggests that the transfer parameters are not as conservative as might be desired

Scintigraphic evaluation of gastrointestinal motility disorders

Energy Technology Data Exchange (ETDEWEB)

Choe, Jae Gol [College of Medicine, Korea Univ., Seoul (Korea, Republic of)

2001-02-01

Current scintigraphic tests of gastrointestinal motor function provides relevant pathophysiologic information, but their clinical utility is controversial. Many scintigraphic methods are developed to investigate gastrointestinal motility from oral cavity to colon. These are esophageal transit scintigraphy, oropharyngeal transit study, gastric emptying test, small bowel transit time measurement, colon transit study and gastroesopahgeal reflux scintigraphy. Scintigraphy of gastrointestinal tract is the most physiologic and noninvasive method to evaluate gastrointestinal motility disorders. Stomach emptying test is regarded as a gold standard in motility study. Gastrointestinal transit scintigraphy also has a certain role in assessment of drug effect to GI motility and changes after theraphy of motility disorders. Scintigraphy provides noninvasive and quantitative assessment of physiological transit throughout the gastrointestinal tract, and it is extremely useful for diagnosing gastrointestinal motor dysfunction. This article reviews the current procedures, indications, significance and guidelines for gastrointestinal motility measurements by scintigraphy.

Scintigraphic evaluation of gastrointestinal motility disorders

International Nuclear Information System (INIS)

Choe, Jae Gol

2001-01-01

Current scintigraphic tests of gastrointestinal motor function provides relevant pathophysiologic information, but their clinical utility is controversial. Many scintigraphic methods are developed to investigate gastrointestinal motility from oral cavity to colon. These are esophageal transit scintigraphy, oropharyngeal transit study, gastric emptying test, small bowel transit time measurement, colon transit study and gastroesopahgeal reflux scintigraphy. Scintigraphy of gastrointestinal tract is the most physiologic and noninvasive method to evaluate gastrointestinal motility disorders. Stomach emptying test is regarded as a gold standard in motility study. Gastrointestinal transit scintigraphy also has a certain role in assessment of drug effect to GI motility and changes after theraphy of motility disorders. Scintigraphy provides noninvasive and quantitative assessment of physiological transit throughout the gastrointestinal tract, and it is extremely useful for diagnosing gastrointestinal motor dysfunction. This article reviews the current procedures, indications, significance and guidelines for gastrointestinal motility measurements by scintigraphy

The effects of daikenchuto (DKT) on propulsive motility in the colon.

Science.gov (United States)

Wood, Michael J; Hyman, Neil H; Mawe, Gary M

2010-11-01

The purpose of this study is to examine the use of daikenchuto (DKT), a traditional Japanese medicine, as a potential treatment for opiate-induced slowing of intestinal transit in an isolated guinea pig colon model of motility. Isolated segments of distal guinea pig colon were mounted in a perfusion chamber and imaged with a digital video camera interfaced with a computer. Fecal pellets were inserted into the oral end of the colonic segment and the rates of propulsive motility over a 3 to 4 cm segment of colon were determined in the presence and absence of test compounds. In addition, intracellular recordings were obtained from intact circular muscle, and the responsiveness of inhibitory and excitatory junction potentials to DKT was evaluated. The addition of D-Ala2, N-Me-Phe4, Gly-ol5 (DAMGO), a selective μ-receptor agonist, caused a concentration dependent decrease in colon motility. Naloxone did not affect basal activity, but partially restored motility in the DAMGO treated preparations. DKT (1 × 10(-4)-3 × 10(-4)g/mL) also reversed the inhibitory effect of DAMGO treated colon in a concentration dependent manner. At higher concentrations (1 × 10(-3)-3 × 10(-3)g/mL), however, this effect was lost. Motility slowed even further when naloxone and DKT were combined with noticeable disruptions in spatiotemporal patterns. Interestingly, when added alone, DKT resulted in reverse peristalsis of the pellet. In electrophysiologic studies DKT inhibited both excitatory and inhibitory junction potentials. DKT appears to be as effective as naloxone in restoring motility in DAMGO treated colon. These two agents, however, do not appear to have an additive effect. When used on untreated colon segments, DKT appears to cause disruptions in the intrinsic reflex circuit of the gut resulting in a disruption of neuromuscular communication. Copyright © 2010 Elsevier Inc. All rights reserved.

Spermatozoa motility and short-term sperm storage of colourful orfe (Leuciscus idus aberr orfus

Directory of Open Access Journals (Sweden)

Beata I. Cejko

2012-07-01

Full Text Available In this study the effect of six activating buffers on the movement parameters of sperm was determined and short-term storage of semen in TLP buffer was attempted (0.292g NaCl; 0.012g KCl; 0.011g CaCl2; 0.004g MgCl2; 0.105g NaHCO3; 0.002g NaH2PO4; 50ml; pH 8.6. Sperm was collected from five orfe individual, and spermiation was stimulated by means of an intraperitoneal Ovopel injection. The basic parameters of spermatozoa motility were measured after the semen was diluted with six different activating solutions, previously used successfully in other fish species. The motility analysis was conducted on a Crismas apparatus. Additionally, short-term storage of semen in TLP buffer was attempted. Subsequently, motility parameters were verified after 0 (Control, 24 and 120 h of storage at 4°C. It has been found that Lahnsteiner’s buffer (100 mM NaCl, 10 mM Tris, 0.5% albumin, 199 mOsmkg-1 was found to be the most effective in sperm activation. In this paper, the spermatozoa motility of colourful ide is indicated for the first time. Finally, there was a successful attempt at short-term sperm storage for five days. For artificial insemination, it is very important to select the most effective solution to stimulate sperm motility. Data regarding sperm manipulation of orfe are scarce, so the aim of the study was to determine the basic sperm quality parameters of the colour ide form, i.e. Leuciscus idus aberr orfus.

Relationship of Total Motile Sperm Count and Percentage Motile Sperm to Successful Pregnancy Rates Following Intrauterine Insemination

OpenAIRE

Pasqualotto, Eleonora B.; Daitch, James A.; Hendin, Benjamin N.; Falcone, Tommaso; Thomas, Anthony J.; Nelson, David R.; Agarwal, Ashok

1999-01-01

Purpose:This study sought (i) to investigate the relationship between postwash total motile sperm count and postwash percentage motile sperm in predicting successful intrauterine insemination and (ii) to determine the minimal postwash total motile sperm count required to achieve pregnancy with intrauterine insemination.

Bacterial motility complexes require the actin-like protein, MreB and the Ras homologue, MglA.

Science.gov (United States)

Mauriello, Emilia M F; Mouhamar, Fabrice; Nan, Beiyan; Ducret, Adrien; Dai, David; Zusman, David R; Mignot, Tâm

2010-01-20

Gliding motility in the bacterium Myxococcus xanthus uses two motility engines: S-motility powered by type-IV pili and A-motility powered by uncharacterized motor proteins and focal adhesion complexes. In this paper, we identified MreB, an actin-like protein, and MglA, a small GTPase of the Ras superfamily, as essential for both motility systems. A22, an inhibitor of MreB cytoskeleton assembly, reversibly inhibited S- and A-motility, causing rapid dispersal of S- and A-motility protein clusters, FrzS and AglZ. This suggests that the MreB cytoskeleton is involved in directing the positioning of these proteins. We also found that a DeltamglA motility mutant showed defective localization of AglZ and FrzS clusters. Interestingly, MglA-YFP localization mimicked both FrzS and AglZ patterns and was perturbed by A22 treatment, consistent with results indicating that both MglA and MreB bind to motility complexes. We propose that MglA and the MreB cytoskeleton act together in a pathway to localize motility proteins such as AglZ and FrzS to assemble the A-motility machineries. Interestingly, M. xanthus motility systems, like eukaryotic systems, use an actin-like protein and a small GTPase spatial regulator.

SimPackJ/S: a web-oriented toolkit for discrete event simulation

Science.gov (United States)

Park, Minho; Fishwick, Paul A.

2002-07-01

SimPackJ/S is the JavaScript and Java version of SimPack, which means SimPackJ/S is a collection of JavaScript and Java libraries and executable programs for computer simulations. The main purpose of creating SimPackJ/S is that we allow existing SimPack users to expand simulation areas and provide future users with a freeware simulation toolkit to simulate and model a system in web environments. One of the goals for this paper is to introduce SimPackJ/S. The other goal is to propose translation rules for converting C to JavaScript and Java. Most parts demonstrate the translation rules with examples. In addition, we discuss a 3D dynamic system model and overview an approach to 3D dynamic systems using SimPackJ/S. We explain an interface between SimPackJ/S and the 3D language--Virtual Reality Modeling Language (VRML). This paper documents how to translate C to JavaScript and Java and how to utilize SimPackJ/S within a 3D web environment.

SimNEC : research platform for studying human functioning in NCW

NARCIS (Netherlands)

Veen, H.A.H.C. van; Graaf, B. de; Essens, P.

2006-01-01

SimNEC is TNOÆs grand scheme for experimentally studying human factors issues related to NEC/NCW. The research platform SimNEC consists of multidisciplinary expert teams, long-term research programmes, and a local network of state-of-the-art simulator modules. SimNEC does not focus on technology,

Parameters Affecting 137Cs Migration within Soil Profile

International Nuclear Information System (INIS)

Sefien, S.M.; Ibrahim, A.S.; Abdelmalik, W.E.Y.

2013-01-01

Some studies have been carried out on the adsorption, distribution and migration of 137 Cs within soils of the area in the vicinity of the Nuclear Research Centre, Egypt, and Ismailia Canal. The soil physicochemical and mineralogical characteristics were carried out and indicated that the soil samples consisted mainly of sand fraction (quartz) and silt fractions (semctite minerals). The kinetics of caesium adsorption and its adsorption isotherms for the tested soils were also studied. The sorption of 137 Cs on soil minerals markedly affects its migration rate. The natural background of both locations of study indicated that the amounts of 137 Cs present in the reactor site were found to be originated from the fallout and from the external contamination which affected the background level. The 137 Cs activity at the canal site was found to be 20.01 Bq/m 2 .cm, while that around the reactor site were found to be 231.15 Bq/m2.cm which may be originating from the fallout and from external contamination which affect the background level at that location. The activity in the canal soil which amounted to 20.01 Bq/m2/cm (0.87 Bq/kg) is about that of background.Based on the distribution data, the vertical distribution of 137 Cs has been studied for soil in both locations (the vicinity of the Nuclear Research Centre (NRC) and Ismailia canal). The vertical migration rates of 137 Cs were calculated for soil samples selected from different locations. These rates were found to be 0.056 and 0.031 cm/year for the reactor and canal site respectively.

137Cs and 9Sr uptake by sunflower cultivated under hydroponic conditions

International Nuclear Information System (INIS)

Soudek, Petr; Valenova, Sarka; Vavrikova, Zuzana; Vanek, Tomas

2006-01-01

The 9 Sr and 137 Cs uptake by the plant Helianthus annuus L. was studied during cultivation in a hydroponic medium. The accumulation of radioactivity in plants was measured after 2, 4, 8, 16 and 32 days of cultivation. About 12% of 137 Cs and 20% of 9 Sr accumulated during the experiments. We did not find any differences between the uptake of radioactive and stable caesium and strontium isotopes. Radioactivity distribution within the plant was determined by autoradiography. 137 Cs was present mainly in nodal segments, leaf veins and young leaves. High activity of 9 Sr was localized in leaf veins, stem, central root and stomata. The influence of stable elements or analogues on the transfer behaviour was investigated. The percentage of non-active caesium and strontium concentration in plants decreased with the increasing initial concentration of Cs or Sr in the medium. The percentage of 9 Sr activity in plants decreased with increasing initial activity of the nuclide in the medium, but the activity of 137 Cs in plants increased. The influence of K + and NH 4 + on the uptake of 137 Cs and the influence of Ca 2+ on the uptake of 9 Sr was tested. The highest accumulation of 137 Cs (24-27% of the initial activity of 137 Cs) was found in the presence of 10 mM potassium and 12 mM ammonium ions. Accumulation of about 22% of initial activity of 9 Sr was determined in plants grown on the medium with 8 mM calcium ions

Spatial variability and Cesium-137 inventories in native forest

International Nuclear Information System (INIS)

Andrello, A.C.; Appoloni, C.R.

2004-01-01

With the nuclear fission discovery and development of nuclear weapons in 1940s, artificial radioisotopes were introduced in the environment. This contamination is due to worldwide fallout by superficial nuclear tests realized from early 1950s to late 1970s by USA, former URSS, UK, France and China. One of theses radioisotopes that have been very studied is cesium-137. Cesium-137 has a half-life of 30.2 years and its biological behavior is similar to the potassium. The behavior in soil matrix, depth distribution, spatial variability and inventories values of cesium-137 has been determinate for several regions of the world. In Brazil, some research groups have worked on this subject, but there are few works published about theses properties of cesium-137. The aim of this paper was study the depth distribution, spatial variability, and inventory of cesium-137 in native forest. Two native forests (Mata 1 and Mata UEL) were sampling in region of Londrina, PR. The results shows that there is a spatial variability of 40% for Mata 1 and 42% for Mata UEL. The depth distribution of cesium-137 for two forests presented a exponential form, characteristic to undisturbed soil. Cesium-137 inventory determinate for Mata 1 was 358 Bq m -2 and for Mata UEL was 320 Bq m -2 . (author)

“Intensity-Response” Effects of Electroacupuncture on Gastric Motility and Its Underlying Peripheral Neural Mechanism

Directory of Open Access Journals (Sweden)

Yang-Shuai Su

2013-01-01

Full Text Available The aim of this study was to explore the “intensity-response” relationship between EAS and the effect of gastric motility of rats and its underlying peripheral neural mechanism by employing ASIC3 knockout (ASIC3−/−, TRPV1 knockout (TRPV1−/−, and C57BL/6 mice. For adult male Sprague-Dawley (n=18 rats, the intensities of EAS were 0.5, 1, 3, 5, 7, and 9 mA, respectively. For mice (n=8 in each group, only 1 mA was used, by which C fiber of the mice can be activated. Gastric antrum motility was measured by intrapyloric balloon. Gastric motility was facilitated by EAS at ST36 and inhibited by EAS at CV12. The half maximal facilitation intensity of EAS at ST36 was 2.1–2.3 mA, and the half maximal inhibitory intensity of EAS at CV12 was 2.8 mA. In comparison with C57BL/6 mice, the facilitatory effect of ST36 and inhibitive effect of CV12 in ASIC3−/− mice decreased, but the difference was not statistically significant (P>0.05. However, these effects in TRPV1−/− mice decreased significantly (P<0.001. The results indicated that there existed an “intensity-response” relationship between EAS and the effect of gastric motility. TRPV1 receptor was involved in the regulation of gastric motility of EAS.

Deposition of 137Cs in Rokkasho, Japan and its relation to Asian dust

International Nuclear Information System (INIS)

Akata, Naofumi; Hasegawa, Hidenao; Kawabata, Hitoshi; Chikuchi, Yuki; Sato, Tadahiro; Ohtsuka, Yoshihito; Kondo, Kunio; Hisamatsu, Shun'ichi

2007-01-01

Biweekly atmospheric depositions of 137 Cs were measured in Rokkasho, Aomori, Japan from March 2000 to March 2006 to study recent 137 Cs deposition. Although the deposition level was generally lower than the detectable limit, deposition samples collected in spring occasionally had measurable levels of 137 Cs. The annual 137 Cs deposition from 2001 to 2005 was 0.04-0.69 Bq m -2 with a mean value of 0.27 Bq m -2 . Depositions of insoluble Al, Fe and Ti were strongly correlated with the 137 Cs deposition, suggesting that suspension of soil particles was the main source of the recent 137 Cs deposition. Asian dust events were coincident with some of the significant 137 Cs depositions in spring. It was found that the ratios of 137 Cs/Al and Fe/Al could be used as indices for discriminating Asian dust from suspension of the local surface soil. Backward trajectory analysis suggested southern Mongolian and northeastern China regions as sources of the significant 137 Cs depositions

Vagal activation by sham feeding improves gastric motility in functional dyspepsia.

Science.gov (United States)

Lunding, J A; Nordström, L M; Haukelid, A-O; Gilja, O H; Berstad, A; Hausken, T

2008-06-01

Antral hypomotility and impaired gastric accommodation in patients with functional dyspepsia have been ascribed to vagal dysfunction. We investigated whether vagal stimulation by sham feeding would improve meal-induced gastric motor function in these patients. Fourteen healthy volunteers and 14 functional dyspepsia patients underwent a drink test twice, once with and once without simultaneous sham feeding. After ingesting 500 mL clear meat soup (20 kcal, 37 degrees C) in 4 min, sham feeding was performed for 10 min by chewing a sugar-containing chewing gum while spitting out saliva. Using two- and three-dimensional ultrasound, antral motility index (contraction amplitude x frequency) and intragastric volumes were estimated. Without sham feeding, functional dyspepsia patients had lower motility index than healthy volunteers (area under curve 8.0 +/- 1.2 vs 4.4 +/- 1.0 min(-1), P = 0.04). In functional dyspepsia patients, but not in healthy volunteers, motility index increased and intragastric volume tended to increase by sham feeding (P = 0.04 and P = 0.06 respectively). The change in motility index was negatively correlated to the change in pain score (r = -0.59, P = 0.007). In functional dyspepsia patients, vagal stimulation by sham feeding improves antral motility in response to a soup meal. The result supports the view that impaired vagal stimulation is implicated in the pathogenesis of gastric motility disturbances in functional dyspepsia.

RELATIONSHIP BETWEEN LEVEL OF COPPER IN BOVINE SEMINAL PLASMA AND SPERMATOZOA MOTILITY

Directory of Open Access Journals (Sweden)

Zuzana Kňažická

2013-02-01

Full Text Available The aim of this study was to evaluate relationship between copper (Cu concentration of bovine seminal plasma and spermatozoa motility. Semen samples were collected from 13 breeding bulls. The motility analysis was carried out using the Computer Assisted Sperm Analysis (CASA system. The mean value for the percentage of motile spermatozoa (MOT was 92.46±3.99% and the progressive motility of the spermatozoa (PROG as 90.23±4.02%. The seminal plasma Cu concentrations were analyzed by UV/VIS spectrophotometry. The total Cu concentration of the seminal plasma was 4.28±1.47 μM/L. The correlation analysis revealed a strong negative correlation between MOT and seminal plasma Cu concentration (rp=-0.781; P<0.01 as well as between PROG and Cu content in the seminal plasma (rp=-0.726; P<0.01. The data obtained from this study clearly indicated that concentration of copper in seminal plasma negatively affects the spermatozoa motility parameters and subsequently might cause reproductive alteration in male sexual functions.

Sim-based detection tools to minimize motorcycle theft

Science.gov (United States)

Triansyah, F. A.; Mudhafar, Z.; Lestari, C.; Amilia, S.; Ruswana, N. D.; Junaeti, E.

2018-05-01

The number of motorcycles in Indonesia spurs the increased criminal acts of motorcycle theft. In addition, the number of motorcycles increases the number of traffic accidents caused by improper motorists. The purpose of this research is to make METEOR (SIM Detector) which is a tool to detect the feasibility of SIM (driver license) which is used to operate and protect motorcycle against theft. METEOR is made through the assembly, encoding, testing, and sequencing stages of the motorcycle. Based on the research that has been done, METEOR generated that can detect the SIM by using additional RFID chip and can be set on the motorcycle. Without the proper SIM, motorized chests coupled with METEOR cannot be turned on. So it can be concluded that motorcycles with additional METEOR is able to be a safety device against theft and as a tool to test the feasibility of motorcycle riders.

The eponymous Dr James Marion Sims MD, LLD (1813-1883).

Science.gov (United States)

West, M J; Irvine, L M

2015-02-01

Dr James Marion Sims was born in 1813 in Lancaster County, South Carolina. It was while pioneering numerous surgical procedures in Alabama that in 1849 he achieved the outstanding landmark in medical history of successfully, and consistently, repairing vesicovaginal fistulae. Sims soon developed a reputation as a fine surgeon, with new operations and techniques, using novel surgical instruments and his innovative approaches frequently published. Moving to New York City in 1853, he further established hospitals devoted entirely to women's health. Sims was controversial, with flamboyant descriptions of self-confident success, yet they were tempered with sober reflection of failure and loss. Today we remain with the Sims speculum and Sims position, eponymous tributes to his accomplishments as the 'Father of Gynaecology'. © The Author(s) 2013 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

Colony Expansion of Socially Motile Myxococcus xanthus Cells Is Driven by Growth, Motility, and Exopolysaccharide Production.

Directory of Open Access Journals (Sweden)

Pintu Patra

2016-06-01

Full Text Available Myxococcus xanthus, a model organism for studies of multicellular behavior in bacteria, moves exclusively on solid surfaces using two distinct but coordinated motility mechanisms. One of these, social (S motility is powered by the extension and retraction of type IV pili and requires the presence of exopolysaccharides (EPS produced by neighboring cells. As a result, S motility requires close cell-to-cell proximity and isolated cells do not translocate. Previous studies measuring S motility by observing the colony expansion of cells deposited on agar have shown that the expansion rate increases with initial cell density, but the biophysical mechanisms involved remain largely unknown. To understand the dynamics of S motility-driven colony expansion, we developed a reaction-diffusion model describing the effects of cell density, EPS deposition and nutrient exposure on the expansion rate. Our results show that at steady state the population expands as a traveling wave with a speed determined by the interplay of cell motility and growth, a well-known characteristic of Fisher's equation. The model explains the density-dependence of the colony expansion by demonstrating the presence of a lag phase-a transient period of very slow expansion with a duration dependent on the initial cell density. We propose that at a low initial density, more time is required for the cells to accumulate enough EPS to activate S-motility resulting in a longer lag period. Furthermore, our model makes the novel prediction that following the lag phase the population expands at a constant rate independent of the cell density. These predictions were confirmed by S motility experiments capturing long-term expansion dynamics.

Colony Expansion of Socially Motile Myxococcus xanthus Cells Is Driven by Growth, Motility, and Exopolysaccharide Production.

Science.gov (United States)

Patra, Pintu; Kissoon, Kimberley; Cornejo, Isabel; Kaplan, Heidi B; Igoshin, Oleg A

2016-06-01

Myxococcus xanthus, a model organism for studies of multicellular behavior in bacteria, moves exclusively on solid surfaces using two distinct but coordinated motility mechanisms. One of these, social (S) motility is powered by the extension and retraction of type IV pili and requires the presence of exopolysaccharides (EPS) produced by neighboring cells. As a result, S motility requires close cell-to-cell proximity and isolated cells do not translocate. Previous studies measuring S motility by observing the colony expansion of cells deposited on agar have shown that the expansion rate increases with initial cell density, but the biophysical mechanisms involved remain largely unknown. To understand the dynamics of S motility-driven colony expansion, we developed a reaction-diffusion model describing the effects of cell density, EPS deposition and nutrient exposure on the expansion rate. Our results show that at steady state the population expands as a traveling wave with a speed determined by the interplay of cell motility and growth, a well-known characteristic of Fisher's equation. The model explains the density-dependence of the colony expansion by demonstrating the presence of a lag phase-a transient period of very slow expansion with a duration dependent on the initial cell density. We propose that at a low initial density, more time is required for the cells to accumulate enough EPS to activate S-motility resulting in a longer lag period. Furthermore, our model makes the novel prediction that following the lag phase the population expands at a constant rate independent of the cell density. These predictions were confirmed by S motility experiments capturing long-term expansion dynamics.

Evaluation of the airway of the SimMan full-scale patient simulator

DEFF Research Database (Denmark)

Hesselfeldt, R; Kristensen, M S; Rasmussen, L S

2005-01-01

SimMan is a full-scale patient simulator, capable of simulating normal and pathological airways. The performance of SimMan has never been critically evaluated.......SimMan is a full-scale patient simulator, capable of simulating normal and pathological airways. The performance of SimMan has never been critically evaluated....

The role of the transcription factor SIM2 in prostate cancer.

Directory of Open Access Journals (Sweden)

Bin Lu

Full Text Available Recent reports have suggested a possible involvement of Single-minded homolog 2 (SIM2 in human solid cancers, including prostate cancer. However, the exact role of SIM2 in cancer in general, and in prostate cancer in particular, remains largely unknown. This study was designed to elucidate the role of SIM2 in prostate cancer using a shRNA-based approach in the PC3 prostate cancer cell line.Lentiviral shRNAs were used to inhibit SIM2 gene and protein levels in PC3 cells. Quantitative RT-PCR and branched DNA were performed to evaluate transcript expression. SIM2 protein expression level was measured by western blot. Profiling of gene expression spanning the whole genome, as well as polar metabolomics of several major metabolic pathways was performed to identify major pathway dysregulations.SIM2 gene and protein products were significantly downregulated by lenti-shRNA in PC3 cell line. This low expression of SIM2 affected gene expression profile, revealing significant changes in major signaling pathways, networks and functions. In addition, major metabolic pathways were affected.Taken together, our results suggest an involvement of SIM2 in key traits of prostate tumor cell biology and might underlie a contribution of this transcription factor to prostate cancer onset and progression.

Structural analysis of poly-SUMO chain recognition by the RNF4-SIMs domain.

Science.gov (United States)

Kung, Camy C-H; Naik, Mandar T; Wang, Szu-Huan; Shih, Hsiu-Ming; Chang, Che-Chang; Lin, Li-Ying; Chen, Chia-Lin; Ma, Che; Chang, Chi-Fon; Huang, Tai-Huang

2014-08-15

The E3 ubiquitin ligase RNF4 (RING finger protein 4) contains four tandem SIM [SUMO (small ubiquitin-like modifier)-interaction motif] repeats for selective interaction with poly-SUMO-modified proteins, which it targets for degradation. We employed a multi-faceted approach to characterize the structure of the RNF4-SIMs domain and the tetra-SUMO2 chain to elucidate the interaction between them. In solution, the SIM domain was intrinsically disordered and the linkers of the tetra-SUMO2 were highly flexible. Individual SIMs of the RNF4-SIMs domains bind to SUMO2 in the groove between the β2-strand and the α1-helix parallel to the β2-strand. SIM2 and SIM3 bound to SUMO with a high affinity and together constituted the recognition module necessary for SUMO binding. SIM4 alone bound to SUMO with low affinity; however, its contribution to tetra-SUMO2 binding avidity is comparable with that of SIM3 when in the RNF4-SIMs domain. The SAXS data of the tetra-SUMO2-RNF4-SIMs domain complex indicate that it exists as an ordered structure. The HADDOCK model showed that the tandem RNF4-SIMs domain bound antiparallel to the tetra-SUMO2 chain orientation and wrapped around the SUMO protamers in a superhelical turn without imposing steric hindrance on either molecule.

Laser irradiation of centrosomes in newt eosinophils: evidence of centriole role in motility

Energy Technology Data Exchange (ETDEWEB)

Koonce, M.P.; Cloney, R.A.; Berns, M.W.

1984-06-01

Newt eosinophils are motile granulated leukocytes that uniquely display a highly visible centrosomal area. Electron microscope and tubulin antibody fluorescence confirms the presence of centrioles, pericentriolar material, and radiating microtubules within this visible area. Actin antibodies intensely stain the advancing cell edges and tail but only weakly stain pseudopods being withdrawn into the cell. Randomly activated eosinophils follow a roughly consistent direction with an average rate of 22.5 ..mu..m/min. The position of the centrosome is always located between the trailing cell nucleus and advancing cell edge. If the cell extends more than one pseudopod, the one closest to or containing the centrosome is always the one in which motility continues. Laser irradiation of the visible centrosomal area resulted in rapid cell rounding. After several minutes following irradiation, most cells flattened and movement continued. However, postirradiation motility was uncoordinated and directionless, and the rate decreased to an average of 14.5 ..mu..m/min. Electron microscopy and tubulin immunofluorescence indicated that an initial disorganization of microtubules resulted from the laser microirradiations. After several minutes, organized microtubules reappeared, but the centrioles appeared increasingly damaged. The irregularities in motility due to irradiation are probably related to the damaged centrioles. The results presented in this paper suggest that the centrosome is an important structure in controlling the rate and direction of newt eosinophil motility.

Dose-response effects of estrogenic mycotoxins (zearalenone, alpha- and beta-zearalenol on motility, hyperactivation and the acrosome reaction of stallion sperm

Directory of Open Access Journals (Sweden)

Colenbrander Ben

2011-10-01

Full Text Available Abstract Background The aim of this study was to investigate the in vitro effects of the Fusarium fungus-derived mycotoxin, zearalenone and its derivatives alpha-zearalenol and beta-zearalenol on motility parameters and the acrosome reaction of stallion sperm. Since the toxic effects of zearalenone and its derivatives are thought to result from their structural similarity to 17beta-estradiol, 17beta-estradiol was used as a positive control for 'estrogen-like' effects. Methods Stallion spermatozoa were exposed in vitro to zearalenone, alpha-zearalenol, beta-zearalenol or 17beta-estradiol at concentrations ranging from 1 pM - 0.1 mM. After 2 hours exposure, motility parameters were evaluated by computer-assisted analysis, and acrosome integrity was examined by flow cytometry after staining with fluoroscein-conjugated peanut agglutinin. Results Mycotoxins affected sperm parameters only at the highest concentration tested (0.1 mM after 2 hours exposure. In this respect, all of the compounds reduced the average path velocity, but only alpha-zearalenol reduced percentages of motile and progressively motile sperm. Induction of motility patterns consistent with hyperactivation was stimulated according to the following rank of potency: alpha-zearalenol >17beta-estradiol > zearalenone = beta-zearalenol. The hyperactivity-associated changes observed included reductions in straight-line velocity and linearity of movement, and an increase in the amplitude of lateral head displacement, while curvilinear velocity was unchanged. In addition, whereas alpha- and beta- zearalenol increased the percentages of live acrosome-reacted sperm, zearalenone and 17beta-estradiol had no apparent effect on acrosome status. In short, alpha-zearalenol inhibited normal sperm motility, but stimulated hyperactive motility in the remaining motile cells and simultaneously induced the acrosome reaction. Beta-zearalenol induced the acrosome reaction without altering motility

Sim Track User's Manual (v 1.0)

Energy Technology Data Exchange (ETDEWEB)

Luo, Y.

2010-01-27

SimTrack is a simple c++ library designed for the numeric particle tracking in the high energy accelerators. It adopts the 4th order symplectic integrator for the optical transport in the magnetic elements. The 4-D and 6-D weak-strong beam-beam treatments are integrated in it for the beam-beam studies. SimTrack is written with c++ class and standard template library. It provides versatile functions to manage elements and lines. It supports a large range of types of elements. New type of element can be easily created in the library. SimTrack calculates Twiss, coupling and fits tunes, chromaticities and corrects closed orbits. AC dipole and AC multipole are available in this library. SimTrack allows change of element parameters during tracking.

MultiSimPC: a multilevel logic simulator for microcomputers

OpenAIRE

Kelly, John S.

1986-01-01

Approved for public release; distribution is unlimited This thesis describes extensions to a multilevel VLSI logic simulator named MultiSim. Originally developed by Dr. Ausif Mahmood of the Washington State University for large minicomputers such as the VAX-11/780; MultiSim is now operational on desktop microcomputers costing only a few thousand dollars. In addition, MultiSim has been expanded to include provisions for adding user-defined primitive cells to the circuit library, true mu...

Sorbitol Can Fuel Mouse Sperm Motility and Protein Tyrosine Phosphorylation via Sorbitol Dehydrogenase1

Science.gov (United States)

Cao, Wenlei; Aghajanian, Haig K.; Haig-Ladewig, Lisa A.; Gerton, George L.

2008-01-01

Energy sources that can be metabolized to yield ATP are essential for normal sperm functions such as motility. Two major monosaccharides, sorbitol and fructose, are present in semen. Furthermore, sorbitol dehydrogenase (SORD) can convert sorbitol to fructose, which can then be metabolized via the glycolytic pathway in sperm to make ATP. Here we characterize Sord mRNA and SORD expression during mouse spermatogenesis and examine the ability of sorbitol to support epididymal sperm motility and tyrosine phosphorylation. Sord mRNA levels increased during the course of spermatogenic differentiation. SORD protein, however, was first detected at the condensing spermatid stage. By indirect immunofluorescence, SORD was present along the length of the flagella of caudal epididymal sperm. Furthermore, immunoelectron microscopy showed that SORD was associated with mitochondria and the plasma membranes of sperm. Sperm incubated with sorbitol maintained motility, indicating that sorbitol was utilized as an energy source. Sorbitol, as well as glucose and fructose, were not essential to induce hyperactive motility. Protein tyrosine phosphorylation increased in a similar manner when sorbitol was substituted for glucose in the incubation medium used for sperm capacitation. These results indicate that sorbitol can serve as an alternative energy source for sperm motility and protein tyrosine phosphorylation. PMID:18799757

Behaviour of caesium-137 in the marine environment

International Nuclear Information System (INIS)

Gilat, E.; Laichter, Y.; Shafrir, N.H.

1975-01-01

The radiological impacts of radioactive release from nuclear facilities into aquatic environments can be studied by following the behaviour of fallout radionuclides in the sea, provided that they exist in the same physico-chemical state. Caesium-137 entering the sea from fallout, although found to be at extremely low levels in the marine environment, is still detectable and can be considered representative for the behaviour of 137 Cs appearing in cooling waters and effluents of nuclear installations and processing plants located near the sea. The relatively high radiotoxicity, long physical half-life and high fission yield of 137 Cs justify further investigation of its behaviour in aquatic environments. In this investigation the sampling of sea water, sediments and organisms in the Mediterranean Sea was undertaken. Caesium-137 determinations were carried out using an extremely low level Ge(Li) gamma spectrometry system specifically designed for studies of environmental marine radioactivity. The activity of 137 Cs on the surface of the sea was found to be 0.49+-0.17 pCi/1. Caesium-137 concentrations at depth profiles down to 1000 m below the surface show variations by a factor of ten (0.65-0.07), maximum concentrations being found at a depth of 100-300 m. These concentration peaks may be explained by good mixing in the upper layers and by the existence of a thermocline or pycnocline which serve as mixing barriers at depths down to approximately 300 m, at least during part of the year. Caesium-137 concentrations in a number of marine biota representing a marine food chain composed of benthic algae, invertebrates and fishes, were determined. With reference to the average 137 Cs content in the upper water layers of the sea, concentration factors for these organisms were calculated. In all the three taxonomic groups mentioned, values within the range 10-300 were found. Biological concentration factors for any particular radionuclide are independent of its content in the

137Cs in a raised bog in central Sweden

International Nuclear Information System (INIS)

Rosen, K.; Vinichuk, M.; Johanson, K.J.

2009-01-01

The vertical distribution of 137 Cs activity in peat soil profiles and 137 Cs activity concentration in plants of various species was studied in samples collected at two sites on a raised bog in central Sweden. One site (open bog) was in an area with no trees and only a few sparsely growing plant species, while the other (low pine) was less than 100 m from the open bog site and had slowly growing Scots pine, a field layer dominated by some ericaceous plants and ground well-covered by plants. The plant samples were collected in 2004-2007 and were compared with samples collected in 1989 from the same open bog and low pine sites. Ground deposition of 137 Cs in 2005 was similar at both sites, 23 000 Bq m -2 . In the open bog peat profile it seems to be an upward transport of caesium since a clear peak of 137 Cs activity was found in the uppermost 1-4 cm of Sphagnum layers, whereas at the low pine site 137 Cs was mainly found in deeper (10-12 cm) layers. The migration rate was 0.57 cm yr -1 at the open bog site and the migration centre of 137 Cs was at a depth of 10.7, while the rate at the low pine site was 0.78 cm yr -1 and the migration centre was at 14.9 cm. Heather (Calluna vulgaris) was the plant species with the highest 137 Cs activity concentrations at both sites, 43.5 k Bq -1 DM in 1989 decreasing to 20.4 in 2004-2007 on open bog and 22.3 k Bq kg -1 DM in 1989 decreasing to 11.2 k Bq -1 DM by the period 2004-2007 on the low pine site. 137 Cs transfer factors in plants varied between 0.88 and 1.35 on the open bog and between 0.48 and 0.69 m 2 kg -1 DM at the low pine site.

HES6 enhances the motility of alveolar rhabdomyosarcoma cells

Energy Technology Data Exchange (ETDEWEB)

Wickramasinghe, Caroline M [MRC Cancer Cell Unit, Hutchison-MRC Research centre, Addenbrooke' s Hospital Cambridge, CB2 0XZ (United Kingdom); MRC Laboratory of Molecular Biology, Addenbrooke' s Hospital Cambridge, CB2 0QH (United Kingdom); Domaschenz, Renae [MRC Cancer Cell Unit, Hutchison-MRC Research centre, Addenbrooke' s Hospital Cambridge, CB2 0XZ (United Kingdom); Gene Regulation and Chromatin Group, MRC Clinical Sciences Centre, Faculty of Medicine, Imperial College, Hammersmith Campus, Du Cane Road, London W12 ONN (United Kingdom); Amagase, Yoko [MRC Cancer Cell Unit, Hutchison-MRC Research centre, Addenbrooke' s Hospital Cambridge, CB2 0XZ (United Kingdom); Department of Pathophysiology, Faculty of Pharmaceutical Sciences, Doshisha Women' s College of Liberal Arts, Kodo, Kyotanabe, Kyoto 610-0395 (Japan); Williamson, Daniel [Molecular Cytogenetics, The Institute of Cancer Research, Sutton SM2 5NG (United Kingdom); Northern Institute for Cancer Research, Paul O' Gorman Building, Medical School, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH (United Kingdom); Missiaglia, Edoardo; Shipley, Janet [Molecular Cytogenetics, The Institute of Cancer Research, Sutton SM2 5NG (United Kingdom); Murai, Kasumi [MRC Cancer Cell Unit, Hutchison-MRC Research centre, Addenbrooke' s Hospital Cambridge, CB2 0XZ (United Kingdom); Jones, Philip H, E-mail: phj20@cam.ac.uk [MRC Cancer Cell Unit, Hutchison-MRC Research centre, Addenbrooke' s Hospital Cambridge, CB2 0XZ (United Kingdom)

2013-01-01

Absract: HES6, a member of the hairy-enhancer-of-split family of transcription factors, plays multiple roles in myogenesis. It is a direct target of the myogenic transcription factor MyoD and has been shown to regulate the formation of the myotome in development, myoblast cell cycle exit and the organization of the actin cytoskeleton during terminal differentiation. Here we investigate the expression and function of HES6 in rhabdomyosarcoma, a soft tissue tumor which expresses myogenic genes but fails to differentiate into muscle. We show that HES6 is expressed at high levels in the subset of alveolar rhabdomyosarcomas expressing PAX/FOXO1 fusion genes (ARMSp). Knockdown of HES6 mRNA in the ARMSp cell line RH30 reduces proliferation and cell motility. This phenotype is rescued by expression of mouse Hes6 which is insensitive to HES6 siRNA. Furthermore, expression microarray analysis indicates that the HES6 knockdown is associated with a decrease in the levels of Transgelin, (TAGLN), a regulator of the actin cytoskeleton. Knockdown of TAGLN decreases cell motility, whilst TAGLN overexpression rescues the motility defect resulting from HES6 knockdown. These findings indicate HES6 contributes to the pathogenesis of ARMSp by enhancing both proliferation and cell motility.

Vertical distribution of 137Cs in the native forest soil at Londrina region (Parana, Brazil)

International Nuclear Information System (INIS)

Andrello, Avacir Casanova; Appolono, Carlos Roberto; Nascimento Filho, Virgilio Franco do

2002-01-01

The 137 Cs depth distribution has been studied in several areas in the world and its knowledge is very important to verify its behavior in the soil matrix. The form of 137 Cs depth distribution more observed in an undisturbed soil it is exponential type. In this work, the study of 137 Cs depth distribution was accomplished at three native forests and a coffee yard, built before the 137 Cs fallout, in the region of Londrina (Parana). The sampling was conducted in 1 cm, 2 cm, 4 cm and 5 cm increment depth. The 137 Cs inventory observed for the forests was 248 Bq m -2 (Mata1), 338 Bq m -2 (Mata2) and 325 Bq m -2 (MataUEL). No 137 Cs activity was detected in the coffee yard. The 137 Cs depth distribution for the three forests presented the exponential type. For the soil class of the forests, 137 Cs adsorbed on the soil particles can be considered fixed or slowly exchangeable. (author)

Inventory and vertical migration of 137Cs in Spanish mainland soils

International Nuclear Information System (INIS)

Legarda, F.; Romero, L.M.; Herranz, M.; Barrera, M.; Idoeta, R.; Valino, F.; Olondo, C.; Caro, A.

2011-01-01

In this study the total activity of 137 Cs deposited per unit area over the Spanish peninsular territory was analysed using a 150 x 150 km 2 mesh grid, with samples taken from 29 points. The deposited activities ranged between 251 and 6074 Bq/m 2 . A linear relationship was obtained between these values and the mean annual rainfall at each sampling point which allowed a map to be drawn, using GIS software, which shows the distribution of total deposited 137 Cs activity across the Spanish mainland. At twelve of these sampling points the vertical migration profile of 137 Cs was obtained. These profiles are separated into two groups with different behaviour, one of which includes clay and loam soils and the other containing sandy soils. For both groups of profiles the parameters of the convective-diffusive model, which describes the vertical migration of 137 Cs in the soil, v (apparent convection velocity) and D (apparent diffusion coefficient) were calculated. - Highlights: → Measured the 137 Cs activity in Spanish mainland, being within a range of [251, 6074] Bq/m 2 , with a mean value of 1726 Bq/m 2 . → Establishment of the 137 Cs background by means of a 137 Cs inventory map showing its distribution in the Spanish mainland. → 137 Cs shows two different behaviour tendencies in soil depending on it. → The parameters which govern the applied model have been obtained for the analysed profiles. → Analysed those parameters, the two tendencies have been reflected in the obtained values.

Primary Esophageal Motility Disorders: Beyond Achalasia

OpenAIRE

Schlottmann, Francisco; Patti, Marco G.

2017-01-01

The best-defined primary esophageal motor disorder is achalasia. However, symptoms such as dysphagia, regurgitation and chest pain can be caused by other esophageal motility disorders. The Chicago classification introduced new manometric parameters and better defined esophageal motility disorders. Motility disorders beyond achalasia with the current classification are: esophagogastric junction outflow obstruction, major disorders of peristalsis (distal esophageal spasm, hypercontractile esoph...

Detection and genomic characterization of motility in Lactobacillus curvatus: confirmation of motility in a species outside the Lactobacillus salivarius clade.

Science.gov (United States)

Cousin, Fabien J; Lynch, Shónagh M; Harris, Hugh M B; McCann, Angela; Lynch, Denise B; Neville, B Anne; Irisawa, Tomohiro; Okada, Sanae; Endo, Akihito; O'Toole, Paul W

2015-02-01

Lactobacillus is the largest genus within the lactic acid bacteria (LAB), with almost 180 species currently identified. Motility has been reported for at least 13 Lactobacillus species, all belonging to the Lactobacillus salivarius clade. Motility in lactobacilli is poorly characterized. It probably confers competitive advantages, such as superior nutrient acquisition and niche colonization, but it could also play an important role in innate immune system activation through flagellin–Toll-like receptor 5 (TLR5) interaction. We now report strong evidence of motility in a species outside the L. salivarius clade, Lactobacillus curvatus (strain NRIC0822). The motility of L. curvatus NRIC 0822 was revealed by phase-contrast microscopy and soft-agar motility assays. Strain NRIC 0822 was motile at temperatures between 15 °C and 37 °C, with a range of different carbohydrates, and under varying atmospheric conditions. We sequenced the L. curvatus NRIC 0822 genome, which revealed that the motility genes are organized in a single operon and that the products are very similar (>98.5% amino acid similarity over >11,000 amino acids) to those encoded by the motility operon of Lactobacillus acidipiscis KCTC 13900 (shown for the first time to be motile also). Moreover, the presence of a large number of mobile genetic elements within and flanking the motility operon of L. curvatus suggests recent horizontal transfer between members of two distinct Lactobacillus clades: L. acidipiscis in the L. salivarius clade and L. curvatus inthe L. sakei clade. This study provides novel phenotypic, genetic, and phylogenetic insights into flagellum-mediated motility in lactobacilli.

CoaSim Guile Manual — Using the Guile-based CoaSim Simulator

DEFF Research Database (Denmark)

Mailund, T

2006-01-01

CoaSim is a tool for simulating the coalescent process with recombination and geneconversion, under either constant population size or exponential population growth. It effectively constructs the ancestral recombination graph for a given number of chromosomes and uses this to simulate samples...

SIMS device with quadrupole mass spectrometer

International Nuclear Information System (INIS)

Szigethy, D.; Riedel, M.

1980-01-01

A versatile secondary ion mass spectrometer (SIMS) has been designed and constructed. The device is applicable for dinamic and static SIMS investigations. The sputtering and ionisation can be studied simultaneously. Oil diffusion pumps and an auxiliary ion-getter pump are used. A commercial ion gun is used in the working chamber. The secondary ion optics assures the preliminary filtering of fast ions, and the collection of sputtered ions for a separate microprobe analysis. The performance of the apparatus is illustrated with examples. (R.J.)

Motility Control of Bacteria-Actuated Biodegradable Polymeric Microstructures by Selective Adhesion Methods

Directory of Open Access Journals (Sweden)

Hyung Jung Yoo

2014-11-01

Full Text Available Certain bacteria have motility and can be made non-toxic, and using them for drug delivery has been proposed. For example, using bacteria with flagella motion in multiple spin actuators in drug delivery microrobots has been suggested. This paper investigates various adhesion enhancement methods for attaching bacteria on preferred surfaces of cubic polymeric microstructures to achieve the directional control of motion. Serratia marcescens which has an excellent swimming behavior and 50-μm sized cubic structures made of biodegradable poly-capro-lactone (PCL are used. Three treatment methods are investigated and compared to the untreated control case. The first method is retarding bacterial attachments by coating certain surfaces with bovine serum albumin (BSA which makes those surfaces anti-adherent to bacteria. The second and third methods are roughening the surfaces with X-ray irradiation and plasma respectively to purposely increase bacterial attachments on the roughened surfaces. The measured motilities of bacteria-tethered PCL microactuators are 1.40 μm/s for the BSA coating method, 0.82 μm/s for the X-ray irradiation, and 3.89 μm/s for the plasma treatment method. Therefore, among the methods investigated in the paper the plasma treatment method achieves the highest directionality control of bacteria motility.

Investigation of Ion-Solvent Interactions in Nonaqueous Electrolytes Using in Situ Liquid SIMS

Energy Technology Data Exchange (ETDEWEB)

Zhang, Yanyan; Su, Mao; Yu, Xiaofei; Zhou, Yufan; Wang, Jungang; Cao, Ruiguo; Xu, Wu; Wang, Chongmin; Baer, Donald R.; Borodin, Oleg; Xu, Kang; Wang, Yanting; Wang, Xue-Lin; Xu, Zhijie; Wang, Fuyi; Zhu, Zihua

2018-02-06

Ion-solvent interactions in non-aqueous electrolytes are of fundamental interest and practical importance, yet debates regarding ion preferential solvation and coordination numbers persist. In this work, in situ liquid SIMS was used to examine ion-solvent interactions in three representative electrolytes, i.e., lithium hexafluorophosphate (LiPF6) at 1.0 M in ethylene carbonate (EC)-dimethyl carbonate (DMC), and lithium bis(fluorosulfonyl)imide (LiFSI) at both low (1.0 M) and high (4.0 M) concentrations in 1,2-dimethoxyethane (DME). In the positive ion mode, solid molecular evidence strongly supports the preferential solvation of Li+ by EC. Besides, from the negative spectra, we also found that PF6- forms association with EC, which has been neglected by previous studies due to the relatively weak interaction. While in both LiFSI in DME electrolytes, no evidence shows that FSI- is associated with DME. Furthermore, strong salt ion cluster signals were observed in the 1.0 M LiPF6 in EC-DMC electrolyte, suggesting that a significant amount of Li+ ions stay in vicinity of anions. In sharp comparison, weak ion cluster signals were detected in dilute LiFSI in DME electrolyte, suggesting most ions are well separated, in agreement with our molecular dynamics (MD) simulation results. These findings indicate that with virtues of little bias on detecting positive and negative ions and the capability of directly analyzing concentrated electrolytes, in situ liquid SIMS is a powerful tool that can provide key evidence for improved understanding on the ion-solvent interactions in non-aqueous electrolytes. Therefore, we anticipate wide applications of in situ liquid SIMS on investigations of various ion-solvent interactions in the near future.

Sperm cryopreservation affects postthaw motility, but not embryogenesis or larval growth in the Brazilian fish Brycon insignis (Characiformes).

Science.gov (United States)

Viveiros, A T M; Isaú, Z A; Caneppele, D; Leal, M C

2012-09-01

Sperm cryopreservation is an important method for preserving genetic information and facilitating artificial reproduction. The objective was to investigate whether the cryopreservation process affects postthaw sperm motility, embryogenesis, and larval growth in the fish Brycon insignis. Sperm was diluted in methyl glycol and Beltsville Thawing solution, frozen in a nitrogen vapor vessel (dry shipper) and stored in liquid nitrogen. Half of the samples were evaluated both subjectively (% of motile sperm and motility quality score-arbitrary grading system from 0 [no movement] to 5 [rapidly swimming sperm]) and in a computer-assisted sperm analyzer (CASA; percentage of motile sperm and velocity). The other half was used for fertilization and the evaluation of embryogenesis (cleavage and gastrula stages), hatching rate, percentage of larvae with normal development and larval growth up to 112 days posthatching (dph). Fresh sperm was analyzed subjectively (percentage of motile sperm and motility quality score) and used as the control. In the subjective analysis, sperm motility significantly decreased from 100% motile sperm and quality score of 5 in fresh sperm to 54% motile sperm and quality score of 3 after thawing. Under computer-assisted sperm analyzer evaluation, postthaw sperm had 67% motile sperm, 122 μm/sec of curvilinear velocity, 87 μm/sec of straight-line velocity and 103 μm/sec of average path velocity. There were no significant differences between progenies (pooled data) for the percentage of viable embryos in cleavage (62%) or gastrula stages (24%) or in the hatching rate (24%), percentage of normal hatched larvae (93%), larval body weight (39.8 g), or standard length (12.7 cm) at 112 days posthatching. Based on these findings, cryopreserved sperm can be used as a tool to restore the population of endangered species, such as B. insignis, as well as for aquaculture purposes, without any concern regarding quality of the offspring. Copyright © 2012 Elsevier

Radiation-induced motility alterations in medulloblastoma cells

International Nuclear Information System (INIS)

Rieken, Stefan; Rieber, Juliane; Brons, Stephan

2015-01-01

Photon irradiation has been repeatedly suspected of increasing tumor cell motility and promoting locoregional recurrence of disease. This study was set up to analyse possible mechanisms underlying the potentially radiation-altered motility in medulloblastoma cells. Medulloblastoma cell lines D425 and Med8A were analyzed in migration and adhesion experiments with and without photon and carbon ion irradiation. Expression of integrins was determined by quantitative FACS analysis. Matrix metalloproteinase concentrations within cell culture supernatants were investigated by enzyme-linked immunosorbent assay (ELISA). Statistical analysis was performed using Student's t-test. Both photon and carbon ion irradiation significantly reduced chemotactic medulloblastoma cell transmigration through 8-μm pore size membranes, while simultaneously increasing adherence to fibronectin- and collagen I- and IV-coated surfaces. Correspondingly, both photon and carbon ion irradiation downregulate soluble MMP9 concentrations, while upregulating cell surface expression of proadhesive extracellular matrix protein-binding integrin α 5 . The observed phenotype of radiation-altered motility is more pronounced following carbon ion than photon irradiation. Both photon and (even more so) carbon ion irradiation are effective in inhibiting medulloblastoma cell migration through downregulation of matrix metalloproteinase 9 and upregulation of proadhesive cell surface integrin α 5 , which lead to increased cell adherence to extracellular matrix proteins. (author)

Achalasia and Esophageal Motility Disorders

Science.gov (United States)

... Tumors Mediastinal Tumors Achalasia and Esophageal Motility Disorders Pleural Diseases Mesothelioma Achalasia and Esophageal Motility Disorders Overview The esophagus (ĕ-sof´ah-gus) is the hollow, muscular tube that moves food and liquid from your mouth to your stomach. If the ...

{sup 137}CS-determination in game meat from some hunting areas in lower Austria; {sup 137}Cs-Bestimmungen im Wildfleisch aus einigen niederoesterreichischen Jagdrevieren

Energy Technology Data Exchange (ETDEWEB)

Ayromlou, S. [Inst. fuer Anorganische Chemie der Univ. Wien (Austria); Tataruch, F. [Forschungsinstitut fuer Wildtierkunde und Oekologie der Veterinaermedizinischen Univ., Wien (Austria)

2001-07-01

In 1986, the contamination of some regions in Austria by {sup 137}Cs, due to the Chernobyl accident was relatively high. Among other {sup 137}Cs is taken up by people by the consumption of game. In an area of Lower Austria which is relatively heavily contaminated by Chernobyl fallout since 1986 the {sup 137}Cs-contamination of meat of game-animals was measured every year. Clear differences arose in the load of the single game species whose causes just like the temporal changes are discussed. The highest {sup 137}Cs activity concentration was with 5243 Bq/kg measured on a wild boar. With this activity concentration an annual effective dose of only 0,06 mSv can be estimated for an annual average consumption of one kilogram meat of wild boar. (orig.) [German] Druch den Reaktor-Unfall in Tschernobyl wurde Oesterreich gebietsweise relativ stark mit {sup 137}Cs kontaminiert. Unter anderem gelangt {sup 137}Cs durch den Verzehr von Wildfleisch in den Koerper der Menschen. Daher wurden in einem niederoesterreichischen Gebiet, das 1986 durch Fallout verhaeltnismaessig stark kontaminiert worden war seither jaehrlich erlegte Wildtiere auf den {sup 137}Cs-Gehalt ihres Fleisches hin untersucht. Dabei ergaben sich deutliche Unterschiede in der Belastung der einzelnen Wildarten, deren Ursachen ebenso wie die zeitlichen Veraenderungen diskutiert werden. Die hoechste {sup 137}Cs-Aktivitaetskonzentration wurde mit 5243 Bq/kg bei einem Wildschwein gemessen. Mit einen durchschnittlichen Verzehr von 1 kg Wildschweinfleisch pro Jahr kann daraus eine maximale Effektivdosis von nur 0,06 mSv/Jahr abgeschaetzt werden. (orig.)

The portrayal of J. Marion Sims' controversial surgical legacy.

Science.gov (United States)

Spettel, Sara; White, Mark Donald

2011-06-01

In the mid 1800s Dr. J. Marion Sims reported the successful repair of vesicovaginal fistulas with a technique he developed by performing multiple operations on female slaves. A venerated physician in his time, the legacy of Dr. Sims is controversial and represents a significant chapter in the mistreatment of African-Americans by the medical establishment. This review compares the modern debate surrounding his legacy with the presentation of his operation in widely consulted urological texts and journals. A literature review was performed of medical, sociological and periodical sources (1851 to the present) regarding J. Marion Sims and vesicovaginal fistula repair. During the last several decades, while the controversy around Dr. Sims' surgical development has produced a steady stream of articles in the historical and popular literature, relatively little mention is found in standard urology textbooks or journals. With increased public attention, some have debated the removal or modification of public tributes to Dr. Sims. This move has been countered by arguments against the validity of judging a 19th century physician by modern standards. While historians, ethicists and the popular press have debated Dr. Sims' legacy, medical sources have continued to portray him unquestionably as a great figure in medical history. This division keeps the medical profession uninformed and detached from the public debate on his legacy and, thus, the larger issues of ethical treatment of surgical patients. Copyright © 2011 American Urological Association Education and Research, Inc. Published by Elsevier Inc. All rights reserved.

Asian motility studies in irritable bowel syndrome.

Science.gov (United States)

Lee, Oh Young

2010-04-01

Altered motility remains one of the important pathophysiologic factors in patients with irritable bowel syndrome (IBS) who commonly complain of abdominal pain and stool changes such as diarrhea and constipation. The prevalence of IBS has increased among Asian populations these days. Gastrointestinal (GI) physiology may vary between Asian and Western populations because of differences in diets, socio-cultural backgrounds, and genetic factors. The characteristics and differences of GI dysmotility in Asian IBS patients were reviewed. MEDLINE search work was performed including following terms, 'IBS,' 'motility,' 'transit time,' 'esophageal motility,' 'gastric motility,' 'small intestinal motility,' 'colonic motility,' 'anorectal function,' and 'gallbladder motility' and over 100 articles were categorized under 'esophagus,' 'stomach,' 'small intestine,' 'colon,' 'anorectum,' 'gallbladder,' 'transit,' 'motor pattern,' and 'effect of stressors.' Delayed gastric emptying, slow tansit in constipation predominant IBS patients, rapid transit in diarrhea predominant IBS patients, accelerated motility responses to various stressors such as meals, mental stress, or corticotrophin releasing hormones, and altered rectal compliance and altered rectal accomodation were reported in many Asian studies regarding IBS. Many conflicting results were found among these studies and there are still controversies to conclude these as unique features of Asian IBS patients. Multinational and multicenter studies are needed to be performed vigorously in order to elaborate characteristics as well as differences of altered motililty in Asian patients with IBS.

Cs-137 in Arctic foxes (Alopex lagopus) on Svalbard

International Nuclear Information System (INIS)

Gwynn, Justin P.; Fuglei, Eva; Dowdall, Mark

2007-01-01

This study presents 137 Cs muscle activity concentrations in Arctic foxes (Alopex lagopus) from Svalbard over a period of several years and discusses the transfer of 137 Cs to Arctic foxes through likely predator-prey relationships. Mean 137 Cs activity concentrations and 137 Cs T ag values (per trapping season) ranged from 0.51 ± 2.76 to 1.32 ± 2.89 Bq/kg (w.w.) and 5.1 x 10 -4 to 1.3 x 10 -3 m 2 /kg, respectively. Mean concentration ratios of 137 Cs in Arctic foxes compared to probable prey ranged from 1.0 to 7.9. On Svalbard, transfer of 137 Cs to Arctic foxes is likely to occur via both marine and terrestrial food chains. The relative contribution of marine and terrestrial food sources to the diet of Arctic foxes may vary by location and by season and may lead to either an increase or decrease in the trophic transfer of 137 Cs to Arctic foxes compared to transfer resulting from terrestrial only diets

Effect of semen preparation on casa motility results in cryopreserved bull spermatozoa.

Science.gov (United States)

Contri, Alberto; Valorz, Claudio; Faustini, Massimo; Wegher, Laura; Carluccio, Augusto

2010-08-01

Computer-assisted sperm analyzers (CASA) have become the standard tool for evaluating sperm motility and kinetic patterns because they provide objective data for thousands of sperm tracks. However, these devices are not ready-to-use and standardization of analytical practices is a fundamental requirement. In this study, we evaluated the effects of some settings, such as frame rate and frames per field, chamber and time of analysis, and samples preparations, including thawing temperature, sperm sample concentration, and media used for dilution, on the kinetic results of bovine frozen-thawed semen using a CASA. In Experiment 1, the frame rate (30-60 frame/s) significantly affected motility parameters, whereas the number of frames per field (30 or 45) did not seem to affect sperm kinetics. In Experiment 2, the thawing protocol affects sperm motility and kinetic parameters. Sperm sample concentration significantly limited the opportunity to perform the analysis and the kinetic results. A concentration of 100 and 50 x 10(6) sperm/mL limited the device's ability to perform the analysis or gave wrong results, whereas 5, 10, 20, and 30 x 10(6) sperm/mL concentrations allowed the analysis to be performed, but with different results (Experiment 3). The medium used for the dilution of the sample, which is fundamental for a correct sperm head detection, affects sperm motility results (Experiment 4). In this study, Makler and Leja chambers were used to perform the semen analysis with CASA devices. The chamber used significantly affected motility results (Experiment 5). The time between chamber loading and analysis affected sperm velocities, regardless of chamber used. Based on results recorded in this study, we propose that the CASA evaluation of motility of bovine frozen-thawed semen using Hamilton-Thorne IVOS 12.3 should be performed using a frame rate of 60 frame/s and 30 frames per field. Semen should be diluted at least at 20 x 10(6) sperm/mL using PBS. Furthermore, it is

NCAM regulates cell motility

DEFF Research Database (Denmark)

Prag, Søren; Lepekhin, Eugene A; Kolkova, Kateryna

2002-01-01

Cell migration is required during development of the nervous system. The regulatory mechanisms for this process, however, are poorly elucidated. We show here that expression of or exposure to the neural cell adhesion molecule (NCAM) strongly affected the motile behaviour of glioma cells...... independently of homophilic NCAM interactions. Expression of the transmembrane 140 kDa isoform of NCAM (NCAM-140) caused a significant reduction in cellular motility, probably through interference with factors regulating cellular attachment, as NCAM-140-expressing cells exhibited a decreased attachment...... to a fibronectin substratum compared with NCAM-negative cells. Ectopic expression of the cytoplasmic part of NCAM-140 also inhibited cell motility, presumably via the non-receptor tyrosine kinase p59(fyn) with which NCAM-140 interacts. Furthermore, we showed that the extracellular part of NCAM acted as a paracrine...

HexSim: a modeling environment for ecology and conservation.

Science.gov (United States)

HexSim is a powerful and flexible new spatially-explicit, individual based modeling environment intended for use in ecology, conservation, genetics, epidemiology, toxicology, and other disciplines. We describe HexSim, illustrate past applications that contributed to our >10 year ...

A scalable infrastructure model for carbon capture and storage: SimCCS

International Nuclear Information System (INIS)

Middleton, Richard S.; Bielicki, Jeffrey M.

2009-01-01

In the carbon capture and storage (CCS) process, CO 2 sources and geologic reservoirs may be widely spatially dispersed and need to be connected through a dedicated CO 2 pipeline network. We introduce a scalable infrastructure model for CCS (simCCS) that generates a fully integrated, cost-minimizing CCS system. SimCCS determines where and how much CO 2 to capture and store, and where to build and connect pipelines of different sizes, in order to minimize the combined annualized costs of sequestering a given amount of CO 2 . SimCCS is able to aggregate CO 2 flows between sources and reservoirs into trunk pipelines that take advantage of economies of scale. Pipeline construction costs take into account factors including topography and social impacts. SimCCS can be used to calculate the scale of CCS deployment (local, regional, national). SimCCS' deployment of a realistic, capacitated pipeline network is a major advancement for planning CCS infrastructure. We demonstrate simCCS using a set of 37 CO 2 sources and 14 reservoirs for California. The results highlight the importance of systematic planning for CCS infrastructure by examining the sensitivity of CCS infrastructure, as optimized by simCCS, to varying CO 2 targets. We finish by identifying critical future research areas for CCS infrastructure

Improving the Molecular Ion Signal Intensity for In Situ Liquid SIMS Analysis.

Science.gov (United States)

Zhou, Yufan; Yao, Juan; Ding, Yuanzhao; Yu, Jiachao; Hua, Xin; Evans, James E; Yu, Xiaofei; Lao, David B; Heldebrant, David J; Nune, Satish K; Cao, Bin; Bowden, Mark E; Yu, Xiao-Ying; Wang, Xue-Lin; Zhu, Zihua

2016-12-01

In situ liquid secondary ion mass spectrometry (SIMS) enabled by system for analysis at the liquid vacuum interface (SALVI) has proven to be a promising new tool to provide molecular information at solid-liquid and liquid-vacuum interfaces. However, the initial data showed that useful signals in positive ion spectra are too weak to be meaningful in most cases. In addition, it is difficult to obtain strong negative molecular ion signals when m/z>200. These two drawbacks have been the biggest obstacle towards practical use of this new analytical approach. In this study, we report that strong and reliable positive and negative molecular signals are achievable after optimizing the SIMS experimental conditions. Four model systems, including a 1,8-diazabicycloundec-7-ene (DBU)-base switchable ionic liquid, a live Shewanella oneidensis biofilm, a hydrated mammalian epithelia cell, and an electrolyte popularly used in Li ion batteries were studied. A signal enhancement of about two orders of magnitude was obtained in comparison with non-optimized conditions. Therefore, molecular ion signal intensity has become very acceptable for use of in situ liquid SIMS to study solid-liquid and liquid-vacuum interfaces. Graphical Abstract ᅟ.

Alternative Liquid Fuels Simulation Model (AltSim).

Energy Technology Data Exchange (ETDEWEB)

Williams, Ryan; Baker, Arnold Barry; Drennen, Thomas E.

2009-12-01

The Alternative Liquid Fuels Simulation Model (AltSim) is a high-level dynamic simulation model which calculates and compares the production and end use costs, greenhouse gas emissions, and energy balances of several alternative liquid transportation fuels. These fuels include: corn ethanol, cellulosic ethanol from various feedstocks (switchgrass, corn stover, forest residue, and farmed trees), biodiesel, and diesels derived from natural gas (gas to liquid, or GTL), coal (coal to liquid, or CTL), and coal with biomass (CBTL). AltSim allows for comprehensive sensitivity analyses on capital costs, operation and maintenance costs, renewable and fossil fuel feedstock costs, feedstock conversion ratio, financial assumptions, tax credits, CO{sub 2} taxes, and plant capacity factor. This paper summarizes the structure and methodology of AltSim, presents results, and provides a detailed sensitivity analysis. The Energy Independence and Security Act (EISA) of 2007 sets a goal for the increased use of biofuels in the U.S., ultimately reaching 36 billion gallons by 2022. AltSim's base case assumes EPA projected feedstock costs in 2022 (EPA, 2009). For the base case assumptions, AltSim estimates per gallon production costs for the five ethanol feedstocks (corn, switchgrass, corn stover, forest residue, and farmed trees) of $1.86, $2.32, $2.45, $1.52, and $1.91, respectively. The projected production cost of biodiesel is $1.81/gallon. The estimates for CTL without biomass range from $1.36 to $2.22. With biomass, the estimated costs increase, ranging from $2.19 per gallon for the CTL option with 8% biomass to $2.79 per gallon for the CTL option with 30% biomass and carbon capture and sequestration. AltSim compares the greenhouse gas emissions (GHG) associated with both the production and consumption of the various fuels. EISA allows fuels emitting 20% less greenhouse gases (GHG) than conventional gasoline and diesels to qualify as renewable fuels. This allows several of the

Characterizing the adhesion of motile and nonmotile Escherichia coli to a glass surface using a parallel-plate flow chamber.

Science.gov (United States)

McClaine, Jennifer W; Ford, Roseanne M

2002-04-20

A parallel-plate flow chamber was used to measure the attachment and detachment rates of Escherichia coli to a glass surface at various fluid velocities. The effect of flagella on adhesion was investigated by performing experiments with several E. coli strains: AW405 (motile); HCB136 (nonmotile mutant with paralyzed flagella); and HCB137 (nonmotile mutant without flagella). We compared the total attachment rates and the fraction of bacteria retained on the surface to determine how the presence and movement of the flagella influence transport to the surface and adhesion strength in this dynamic system. At the lower fluid velocities, there was no significant difference in the total attachment rates for the three bacterial strains; nonmotile strains settled at a rate that was of the same order of magnitude as the diffusion rate of the motile strain. At the highest fluid velocity, the effect of settling was minimized to better illustrate the importance of motility, and the attachment rates of both nonmotile strains were approximately five times slower than that of the motile bacteria. Thus, different processes controlled the attachment rate depending on the parameter regime in which the experiment was performed. The fractions of motile bacteria retained on the glass surface increased with increasing velocity, whereas the opposite trend was found for the nonmotile strains. This suggests that the rotation of the flagella enables cells to detach from the surface (at the lower fluid velocities) and strengthens adhesion (at higher fluid velocities), whereas nonmotile cells detach as a result of shear. There was no significant difference in the initial attachment rates of the two nonmotile species, which suggests that merely the presence of flagella was not important in this stage of biofilm development. Copyright 2002 Wiley Periodicals, Inc.

WEC-SIM Phase 1 Validation Testing -- Numerical Modeling of Experiments: Preprint

Energy Technology Data Exchange (ETDEWEB)

Ruehl, Kelley; Michelen, Carlos; Bosma, Bret; Yu, Yi-Hsiang

2016-08-01

The Wave Energy Converter Simulator (WEC-Sim) is an open-source code jointly developed by Sandia National Laboratories and the National Renewable Energy Laboratory. It is used to model wave energy converters subjected to operational and extreme waves. In order for the WEC-Sim code to be beneficial to the wave energy community, code verification and physical model validation is necessary. This paper describes numerical modeling of the wave tank testing for the 1:33-scale experimental testing of the floating oscillating surge wave energy converter. The comparison between WEC-Sim and the Phase 1 experimental data set serves as code validation. This paper is a follow-up to the WEC-Sim paper on experimental testing, and describes the WEC-Sim numerical simulations for the floating oscillating surge wave energy converter.

{sup 137}Cs Distribution in the Northern Adriatic Sea (2006-2010)

Energy Technology Data Exchange (ETDEWEB)

Pavicic-Hamer, D. [' Ruder Boskovic' Institute, Centre for Marine Research, Rovinj (Croatia); Barisic, D., E-mail: pavicic@cim.irb.hr [' Ruder Boskovic' Institute, Division for Marine and Environmental Research, Zagreb (Croatia)

2013-07-15

Artificial radioactivity in the northern Adriatic Sea was assessed by analysis of {sup 137}Cs concentrations in seawater, sediment and marine organisms. A comparison of radioactive contamination was made between different parts of the marine ecosystem including the area of the Po river delta, the protected area of the Lim bay and the Rovinj coastal area in the period from 2006 to 2010. In the area of the Po river delta {sup 137}Cs concentrations in seawater had decreased back to pre-Chernobyl values (2.48 Bq/m), although in sediment they were slightly higher (8.70 Bq/kg). Inside the Lim bay area {sup 137}Cs concentrations in surface water were low (1.93 Bq/m) and, in the mussel Mytilus galloprovincialis, even undetectable in this period. In the Rovinj coastal area {sup 137}Cs concentrations in surface water remained constant (2.23 Bq/m), as well as in the surface sediment (1.88 Bq/kg). {sup 137}Cs concentrations were detectable at very low activity levels in Mugil cephalus and Sardina pilchardus. The data indicate that some species such as the intertidal brown algae Fucus virsoides and the benthic fish Mullus barbatus are better bio-accumulators of {sup 137}Cs than others. These species should be used as bio-indicators in future monitoring schemes in the A driatic Sea. (author)

QuakeSim 2.0

Science.gov (United States)

Donnellan, Andrea; Parker, Jay W.; Lyzenga, Gregory A.; Granat, Robert A.; Norton, Charles D.; Rundle, John B.; Pierce, Marlon E.; Fox, Geoffrey C.; McLeod, Dennis; Ludwig, Lisa Grant

2012-01-01

QuakeSim 2.0 improves understanding of earthquake processes by providing modeling tools and integrating model applications and various heterogeneous data sources within a Web services environment. QuakeSim is a multisource, synergistic, data-intensive environment for modeling the behavior of earthquake faults individually, and as part of complex interacting systems. Remotely sensed geodetic data products may be explored, compared with faults and landscape features, mined by pattern analysis applications, and integrated with models and pattern analysis applications in a rich Web-based and visualization environment. Integration of heterogeneous data products with pattern informatics tools enables efficient development of models. Federated database components and visualization tools allow rapid exploration of large datasets, while pattern informatics enables identification of subtle, but important, features in large data sets. QuakeSim is valuable for earthquake investigations and modeling in its current state, and also serves as a prototype and nucleus for broader systems under development. The framework provides access to physics-based simulation tools that model the earthquake cycle and related crustal deformation. Spaceborne GPS and Inter ferometric Synthetic Aperture (InSAR) data provide information on near-term crustal deformation, while paleoseismic geologic data provide longerterm information on earthquake fault processes. These data sources are integrated into QuakeSim's QuakeTables database system, and are accessible by users or various model applications. UAVSAR repeat pass interferometry data products are added to the QuakeTables database, and are available through a browseable map interface or Representational State Transfer (REST) interfaces. Model applications can retrieve data from Quake Tables, or from third-party GPS velocity data services; alternatively, users can manually input parameters into the models. Pattern analysis of GPS and seismicity data

Social motility in african trypanosomes.

Directory of Open Access Journals (Sweden)

Michael Oberholzer

2010-01-01

Full Text Available African trypanosomes are devastating human and animal pathogens that cause significant human mortality and limit economic development in sub-Saharan Africa. Studies of trypanosome biology generally consider these protozoan parasites as individual cells in suspension cultures or in animal models of infection. Here we report that the procyclic form of the African trypanosome Trypanosoma brucei engages in social behavior when cultivated on semisolid agarose surfaces. This behavior is characterized by trypanosomes assembling into multicellular communities that engage in polarized migrations across the agarose surface and cooperate to divert their movements in response to external signals. These cooperative movements are flagellum-mediated, since they do not occur in trypanin knockdown parasites that lack normal flagellum motility. We term this behavior social motility based on features shared with social motility and other types of surface-induced social behavior in bacteria. Social motility represents a novel and unexpected aspect of trypanosome biology and offers new paradigms for considering host-parasite interactions.

OpenSimRoot: widening the scope and application of root architectural models.

Science.gov (United States)

Postma, Johannes A; Kuppe, Christian; Owen, Markus R; Mellor, Nathan; Griffiths, Marcus; Bennett, Malcolm J; Lynch, Jonathan P; Watt, Michelle

2017-08-01

OpenSimRoot is an open-source, functional-structural plant model and mathematical description of root growth and function. We describe OpenSimRoot and its functionality to broaden the benefits of root modeling to the plant science community. OpenSimRoot is an extended version of SimRoot, established to simulate root system architecture, nutrient acquisition and plant growth. OpenSimRoot has a plugin, modular infrastructure, coupling single plant and crop stands to soil nutrient and water transport models. It estimates the value of root traits for water and nutrient acquisition in environments and plant species. The flexible OpenSimRoot design allows upscaling from root anatomy to plant community to estimate the following: resource costs of developmental and anatomical traits; trait synergisms; and (interspecies) root competition. OpenSimRoot can model three-dimensional images from magnetic resonance imaging (MRI) and X-ray computed tomography (CT) of roots in soil. New modules include: soil water-dependent water uptake and xylem flow; tiller formation; evapotranspiration; simultaneous simulation of mobile solutes; mesh refinement; and root growth plasticity. OpenSimRoot integrates plant phenotypic data with environmental metadata to support experimental designs and to gain a mechanistic understanding at system scales. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Radioecological studies of 137Cs in limnological ecosystems. 137Cs concentrations in water, sediment and biota at the lower region of the famous river in Saitama Prefecture

International Nuclear Information System (INIS)

Miyake, Sadaaki; Motegi, Misako; Oosawa, Takashi; Nakazawa, Kiyoaki; Ogata, Hiromitsu; Izumo, Yoshiro; Nakamura, Fumio.

1996-01-01

The concentrations of 137 Cs in water, sediment and biota at the lower region of the famous river in Saitama prefecture were determined in order to elucidate the radioecology of 137 Cs in limnological ecosystems. 137 Cs concentration in water was 0.10 mBq/l. 137 Cs concentrations in sediment, shellfish, Sinotaia quadratus historica (mean for 2 detectable samples), and fish, Carassius auratus cuvieri (mean for 2 detectable samples), were about 6200, 840 and 320 times higher than the concentration of the water, respectively. But 137 Cs radioactivity in the crustacea, Procambarus clarki, was significantly not detected. So, 137 Cs transfer mechanism in the limnological ecosystems was indicated in part. (author)

Cesium-137 inventory of the undisturbed soil areas in the Londrina Region, Parana, Brazil

International Nuclear Information System (INIS)

Andrello, Avacir C.; Appoloni, Carlos Roberto

2005-01-01

Cesium-137 is an artificial radionuclide introduced in the environment through the radioactive fallout of the superficial tests of nuclear weapons. The cesium-137 deposition occurred to middles of the 1980-decade and, due to the Chernobyl accident, great part of Europe had a additional fallout of cesium-137. The contaminations of this accident do not have reached Southern Hemisphere. Cesium-137 is an alkaline metal, high electropositive, that in contact with the soil is strongly adsorbed to the clay in the FES (Frayed Edge Sites) and RES (Regular Edge Sites) positions, and it movement by chemical processes in the soil is insignificant. Because of this, cesium-137 became a good soil marker, and its movement is related to the soil movement particles, so that the cesium-137 have been used in the study of the soil redistribution processes, as a tool of quantifying the rates of soil losses and gain. To use this methodology, it is necessary the knowledge of the reference inventory of cesium-137, that is given as function of the total concentration of cesium-137 deposited in an area by the radioactive fallout. If a sampling point presents less cesium-137 than the reference inventory, this point is considered a point with soil loss; otherwise, the point is considered a point with soil deposition. To evaluate the cesium-137 inventory in the Londrina region, four areas of the undisturbed soil were sampling in grid of 3x3, with a distance of 9 meters among the points. Of these four sampling areas, three areas were of native forest (labeled Mata1, Mata2 and Mata UEL), and one was a pasture area. Cesium-137 inventory was 223 ± 41 Bq m -2 , 240 ± 65 Bq m -2 and 305 ± 36 Bq m -2 for Mata UEL, Mata1 and Mata2, respectively, and of 211 ± 28 Bq m -2 for the native pasture. Considering the deviation in each value, it is not possible to conclude that there are differences among the values of cesium-137 inventory, so that the average reference inventory of cesium-137 for the

Inventory and vertical migration of {sup 137}Cs in Spanish mainland soils

Energy Technology Data Exchange (ETDEWEB)

Legarda, F. [Dept. Nuclear Engineering and Fluid Mechanics, University of the Basque Country, Alda Urquijo, s/n, E-48013 Bilbao (Spain); Romero, L.M. [CIEMAT, Centro de Investigaciones Energeticas, Medioambientales y Tecnologicas, Av. Complutense 22, 28040 Madrid (Spain); Herranz, M. [Dept. Nuclear Engineering and Fluid Mechanics, University of the Basque Country, Alda Urquijo, s/n, E-48013 Bilbao (Spain); Barrera, M. [CIEMAT, Centro de Investigaciones Energeticas, Medioambientales y Tecnologicas, Av. Complutense 22, 28040 Madrid (Spain); Idoeta, R. [Dept. Nuclear Engineering and Fluid Mechanics, University of the Basque Country, Alda Urquijo, s/n, E-48013 Bilbao (Spain); Valino, F. [CIEMAT, Centro de Investigaciones Energeticas, Medioambientales y Tecnologicas, Av. Complutense 22, 28040 Madrid (Spain); Olondo, C., E-mail: kontxi.olondo@ehu.es [Dept. Nuclear Engineering and Fluid Mechanics, University of the Basque Country, Alda Urquijo, s/n, E-48013 Bilbao (Spain); Caro, A. [CIEMAT, Centro de Investigaciones Energeticas, Medioambientales y Tecnologicas, Av. Complutense 22, 28040 Madrid (Spain)

2011-06-15

In this study the total activity of {sup 137}Cs deposited per unit area over the Spanish peninsular territory was analysed using a 150 x 150 km{sup 2} mesh grid, with samples taken from 29 points. The deposited activities ranged between 251 and 6074 Bq/m{sup 2}. A linear relationship was obtained between these values and the mean annual rainfall at each sampling point which allowed a map to be drawn, using GIS software, which shows the distribution of total deposited {sup 137}Cs activity across the Spanish mainland. At twelve of these sampling points the vertical migration profile of {sup 137}Cs was obtained. These profiles are separated into two groups with different behaviour, one of which includes clay and loam soils and the other containing sandy soils. For both groups of profiles the parameters of the convective-diffusive model, which describes the vertical migration of {sup 137}Cs in the soil, v (apparent convection velocity) and D (apparent diffusion coefficient) were calculated. - Highlights: > Measured the {sup 137}Cs activity in Spanish mainland, being within a range of [251, 6074] Bq/m{sup 2}, with a mean value of 1726 Bq/m{sup 2}. > Establishment of the {sup 137}Cs background by means of a {sup 137}Cs inventory map showing its distribution in the Spanish mainland. > {sup 137}Cs shows two different behaviour tendencies in soil depending on it. > The parameters which govern the applied model have been obtained for the analysed profiles. > Analysed those parameters, the two tendencies have been reflected in the obtained values.

SimDialog: A visual game dialog editor

OpenAIRE

Owen, C.; Biocca, F.; Bohil, C.; Conley, J.

2008-01-01

SimDialog is a visual editor for dialog in computer games. This paper presents the design of SimDialog, illustrating how script writers and non-programmers can easily create dialog for video games with complex branching structures and dynamic response characteristics. The system creates dialog as a directed graph. This allows for play using the dialog with a state-based cause and effect system that controls selection of non-player character responses and can provide a basic scoring mechanism ...

Getting Started with CoaSim — An Introduction to the Simulator CoaSim

DEFF Research Database (Denmark)

Mailund, T

2005-01-01

CoaSim is a tool for simulating the coalescent process with recombination and geneconversion, under either constant population size or exponential population growth. It effectively constructs the ancestral recombination graph for a given number of chromosomes and uses this to simulate samples...

Cs-137 in aquatic organisms in the southern Lake Keurusselkae (Finland)[Radioecology

Energy Technology Data Exchange (ETDEWEB)

Ilus, E.; Klemola, S.; Vartti, V.P.; Mattila, J.; Ikaeheimonen, T.K. [STUK - Radiation and Nuclear Safety Authority, Helsinki (Finland)

2006-04-15

The results of a study carried out in Lake Keurusselkae, in the Finnish Lake District, are reported. The aim of the study was to collect biota samples for the INDOFERN Project from an area that was rather highly contaminated (70 kBq m{sup -2} of {sup 137}Cs in 1986) with the Chernobyl fallout in Finland. The samples were taken from a relatively small area surrounding the island of Iso Riihisaari in the southern part of the Keurusselkae water course. In total 15 samples of aquatic plants, 6 samples of aquatic animals, 1 water sample and 2 sediment cores were taken. In August 2003, the activity concentration of {sup 137}Cs in the surface water of the southern Lake Keurusselkae was 49 Bq m{sup -3}, whereas it was 310 Bq m{sup -3} in 1988, two year after the Chernobyl accident. In the relatively shallow area surrounding the island of Iso Riihisaari, the total amount of {sup 137}Cs in sediments was 32-37 kBq m{sup -2} in 2003, but in a deeper basin close to this area the total amount of {sup 137}Cs was 130 kBq m{sup -2} in 1990. The clearly highest activity concentration and concentration factor of {sup 137}Cs was found in one sample of Water horsetail (Equisetum fluviatile), 1 430 Bq kg{sup -1} dry wt; CF 29 200, whereas in another sample of the same species the concentration was only 174 Bq kg{sup -1} dry wt. In addition, the Water lily (Nymphaea candida), Spiked water millfoil (Myriophyllum spicatum), Broad-leaved pondweed (Potamogeton natans) and Yellow water lily (Nuphar lutea) seemed to be good indicators for {sup 137}Cs. The tall freshwater clam (Anodonta sp.) seemed to be a modest accumulator of {sup 137}Cs. Contrary to our results from the coastal areas of the Baltic Sea, many aquatic plants demonstrated in fresh water similar accumulation capacity of {sup 137}Cs as fish (perch and roach), while in the sea the uptake of {sup 137}Cs in fish seemed to be more efficient than in aquatic plants. (LN)

The chemical speciation of 137Cs in sheepmeat

International Nuclear Information System (INIS)

Pang, T.Y.M.; Taylor, D.M.; Williams, D.R.

1996-01-01

Minced sheep muscle, homogenised liver and fragmented rib or cortical bone, from sheep grazing near Bootle, Cumbria, U.K., which had been stored for some months at -20 o C, were extracted at 4 o C with an isotonic 0.15 M NaCl-0.02 M phosphate buffer at pH 7.4. Each successive extraction released about 50% of the total 137 Cs remaining in the tissue. Passage of the extracts through a column of the cation-exchanger Dowex 50 x 8 indicated that essentially all the extracted 137 Cs was in cationic form. (author)

ToF-SIMS measurements with topographic information in combined images.

Science.gov (United States)

Koch, Sabrina; Ziegler, Georg; Hutter, Herbert

2013-09-01

In 2D and 3D time-of-flight secondary ion mass spectrometric (ToF-SIMS) analysis, accentuated structures on the sample surface induce distorted element distributions in the measurement. The origin of this effect is the 45° incidence angle of the analysis beam, recording planar images with distortion of the sample surface. For the generation of correct element distributions, these artifacts associated with the sample surface need to be eliminated by measuring the sample surface topography and applying suitable algorithms. For this purpose, the next generation of ToF-SIMS instruments will feature a scanning probe microscope directly implemented in the sample chamber which allows the performance of topography measurements in situ. This work presents the combination of 2D and 3D ToF-SIMS analysis with topographic measurements by ex situ techniques such as atomic force microscopy (AFM), confocal microscopy (CM), and digital holographic microscopy (DHM). The concept of the combination of topographic and ToF-SIMS measurements in a single representation was applied to organic and inorganic samples featuring surface structures in the nanometer and micrometer ranges. The correct representation of planar and distorted ToF-SIMS images was achieved by the combination of topographic data with images of 2D as well as 3D ToF-SIMS measurements, using either AFM, CM, or DHM for the recording of topographic data.

Application of SIMS to the analysis of environmental samples

International Nuclear Information System (INIS)

Seyama, Haruhiko

2003-01-01

As an example of surface analysis of environmental samples, SIMS was applied to airborne particulates, fish otoliths (a calcareous ear-stone) and biotites (a rock-forming aluminosilicate mineral). Airborne particulates deposited on leaf surface were analyzed directly by fast atom bombardment (FAB)-SIMS using an O 2 primary neutral beam. Some metal elements, such as Pb, of aerosol origin could be detected. Local areas of a thin section of an otolith were analyzed by FAB-SIMS. Line scans and images of secondary ions revealed seasonal periodicity in Sr, Na and K concentrations in the otolith that corresponded to the annual band structure. Surface alteration of acid-treated and naturally weathered biotites was studied by SIMS depth profiling using an O - primary ion. The depth profile of the acid-treated biotite showed the formation of an altered surface layer rich in Si. In contrast a thick altered surface layer was not observed and Al was held on the surface under natural weathering

Functionality of novel black silicon based nanostructured surfaces studied by TOF SIMS

DEFF Research Database (Denmark)

Talian, Ivan; Aranyosiova, M.; Orinak, A.

2010-01-01

A functionality of the novel black silicon based nanostructured surfaces (BS 2) with different metal surface modifications was tested by time-of-flight secondary ion mass spectrometry (TOF SIMS). Mainly two surface functions were studied: analytical signal enhancement and analyte pre-ionization e......A functionality of the novel black silicon based nanostructured surfaces (BS 2) with different metal surface modifications was tested by time-of-flight secondary ion mass spectrometry (TOF SIMS). Mainly two surface functions were studied: analytical signal enhancement and analyte pre......-ionization effect in SIMS due to nanostructure type and the assistance of the noble metal surface coating (Ag or Au) for secondary ion formation. As a testing analyte a Rhodamine 6G was applied. Bi+ has been used as SIMS primary ions. It was found out that SIMS signal enhancement of the analyte significantly...... depends on Ag layer thickness and measured ion mode (negative, positive). The best SIMS signal enhancement was obtained at BS2 surface coated with 400 nm of Ag layer. SIMS fragmentation schemes were developed for a model analyte deposited onto a silver and gold surface. Significant differences in pre...

Development practices and lessons learned in developing SimPEG

Science.gov (United States)

Cockett, R.; Heagy, L. J.; Kang, S.; Rosenkjaer, G. K.

2015-12-01

Inverse modelling provides a mathematical framework for constructing a model of physical property distributions in the subsurface that are consistent with the data collected in geophysical surveys. The geosciences are increasingly moving towards the integration of geological, geophysical, and hydrological information to better characterize the subsurface. This integration must span disciplines and is not only challenging scientifically, but additionally the inconsistencies between conventions often makes implementations complicated, non­ reproducible, or inefficient. SimPEG is an open-source, multi-university effort aimed at providing a generalized framework for solving forward and inverse problems. SimPEG includes finite volume discretizations on structured and unstructured meshes, interfaces to standard numerical solver packages, convex optimization algorithms, model parameterizations, and visualization routines. The SimPEG package (http://simpeg.xyz) supports an ecosystem of forward and inverse modelling applications, including electromagnetics, vadose zone flow, seismic, and potential­ fields, that are all written with a common interface and toolbox. The goal of SimPEG is to support a community of researchers with well-tested, extensible tools, and encourage transparency and reproducibility both of the SimPEG software and the geoscientific research it is applied to. In this presentation, we will share some of the lessons we have learned in designing the modular infrastructure, testing and development practices of SimPEG. We will discuss our use of version control, extensive unit-testing, continuous integration, documentation, issue tracking, and resources that facilitate communication between existing team members and allows new researchers to get involved. These practices have enabled the use of SimPEG in research, industry, and education as well as the ability to support a growing number of dependent repositories and applications. We hope that sharing our

A Virtual Research Environment for a Secondary Ion Mass Spectrometer (SIMS)

Science.gov (United States)

Wiedenbeck, M.; Schäfer, L.; Klump, J.; Galkin, A.

2013-12-01

Overview: This poster describes the development of a Virtual Research Environment for the Secondary Ion Mass Spectrometer (SIMS) at GFZ Potsdam. Background: Secondary Ion Mass Spectrometers (SIMS) are extremely sensitive instruments for analyzing the surfaces of solid and thin film samples. These instruments are rare, expensive and experienced operators are very highly sought after. As such, measurement time is a precious commodity, until now only accessible to small numbers of researchers. The challenge: The Virtual SIMS Project aims to set up a Virtual Research Environment for the operation of the CAMECA IMS 1280-HR instrument at the GFZ Potsdam. The objective of the VRE is to provide SIMS access not only to researchers locally present in Potsdam but also to scientists working with SIMS cooperation partners in e.g., South Africa, Brazil or India. The requirements: The system should address the complete spectrum of laboratory procedures - from online application for measurement time, to remote access for data acquisition to data archiving for the subsequent publication and for future reuse. The approach: The targeted Virtual SIMS Environment will consist of a: 1. Web Server running the Virtual SIMS website providing general information about the project, lab access proposal forms and calendar for the timing of project related tasks. 2. LIMS Server, responsible for scheduling procedures, data management and, if applicable, accounting and billing. 3. Remote SIMS Tool, devoted to the operation of the experiment within a remote control environment. 4. Publishing System, which supports the publication of results in cooperation with the GFZ Library services. 5. Training Simulator, which offers the opportunity to rehearse experiments and to prepare for possible events such as a power outages or interruptions to broadband services. First results: The SIMS Virtual Research Environment will be mainly based on open source software, the only exception being the CAMECA IMS

Analysis of impurities in semiconductor by IMA (SIMS)

International Nuclear Information System (INIS)

Komori, Junko; Masuko, Yoji; Koyama, Hiroshi

1988-01-01

The report outlines the measuring mechanism of SIMS and its applications in the field of semiconductor production. SIMS is the only equipment currently available for micrometer-order analysis and ppb-level impurities detection required for evaluation of semiconductors. In SIMS, sputtering of the sample surface is performed with primary ions and the secondary ions released from the sample are analyzed to identify the atomic species existing in the surface. The sputtering process and ionization process are outlined in the report, though the details of sputtering has not been fully clarified yet. In actual observation, some problems may be caused due to interfering ions and residual ions. In general, various ions including multi-valent ions, cluster ions, molecular ions, hydrogenated/oxygenated ions and hydrocarbon ions are produced in addition to monovalent ions to interfere the atoms under analysis. Interference by these ions can cause serious problems in carrying out depth profile analysis as well as observation of mass spectra. Major applications of SIMS in the field of semiconductor production include the evaluation of silicon surface, light elements, insulating materials and semiconductor devices. Some requirements to be met by further studies are also listed. (N.K.)

137Cs in the fungal compartment of Swedish forest soils

International Nuclear Information System (INIS)

Vinichuk, Mykhaylo M.; Johanson, Karl J.; Taylor, Andy F.S.

2004-01-01

The 137 Cs activities in soil profiles and in the mycelia of four ectomycorrhizal fungi were studied in a Swedish forest in an attempt to understand the mechanisms governing the transfer and retention of 137 Cs in forest soil. The biomass of four species of fungi was determined and estimated to be 16 g m -2 in a peat soil and 47-189 g m -2 in non-peat soil to the depth of 10 cm. The vertical distribution was rather homogeneous for two species (Tylospora spp. and Piloderma fallax) and very superficial for Hydnellum peckii. Most of the 137 Cs activity in mycelium of non-peat soils was found in the upper 5 cm. Transfer factors were quite high even for those species producing resupinate sporocarps. In the peat soil only approximately 0.3% of the total 137 Cs inventory in soil was found in the fungal mycelium. The corresponding values for non-peat soil were 1.3, 1.8 and 1.9%

Flagellar motility confers epiphytic fitness advantages upon Pseudomonas syringae

International Nuclear Information System (INIS)

Haefele, D.M.; Lindow, S.E.

1987-01-01

The role of flagellar motility in determining the epiphytic fitness of an ice-nucleation-active strain of Pseudomonas syringae was examined. The loss of flagellar motility reduced the epiphytic fitness of a normally motile P. syringae strain as measured by its growth, survival, and competitive ability on bean leaf surfaces. Equal population sizes of motile parental or nonmotile mutant P. syringae strains were maintained on bean plants for at least 5 days following the inoculation of fully expanded primary leaves. However, when bean seedlings were inoculated before the primary leaves had expanded and bacterial populations on these leaves were quantified at full expansion, the population size of the nonmotile derivative strain reached only 0.9% that of either the motile parental or revertant strain. When fully expanded bean primary leaves were coinoculated with equal numbers of motile and nonmotile cells, the population size of a nonmotile derivative strain was one-third of that of the motile parental or revertant strain after 8 days. Motile and nonmotile cells were exposed in vitro and on plants to UV radiation and desiccating conditions. The motile and nonmotile strains exhibited equal resistance to both stresses in vitro. However, the population size of a nonmotile strain on leaves was less than 20% that of a motile revertant strain when sampled immediately after UV irradiation. Epiphytic populations of both motile and nonmotile P. syringae declined under desiccating conditions on plants, and after 8 days, the population size of a nonmotile strain was less than one-third that of the motile parental or revertant strain

Curriculum for neurogastroenterology and motility training

DEFF Research Database (Denmark)

Gyawali, C P; Savarino, E; Lazarescu, A

2018-01-01

Although neurogastroenterology and motility (NGM) disorders are some of the most frequent disorders encountered by practicing gastroenterologists, a structured competency-based training curriculum developed by NGM experts is lacking. The American Neurogastroenterology and Motility Society (ANMS) ...

Plankton motility patterns and encounter rates

DEFF Research Database (Denmark)

Visser, Andre; Kiørboe, Thomas

2006-01-01

measure of run length to reaction distance determines whether the underlying encounter is ballistic or diffusive. Since ballistic interactions are intrinsically more efficient than diffusive, we predict that organisms will display motility with long correlation run lengths compared to their reaction...... distances to their prey, but short compared to the reaction distances of their predators. We show motility data for planktonic organisms ranging from bacteria to copepods that support this prediction. We also present simple ballistic and diffusive motility models for estimating encounter rates, which lead...

Rapid characterisation of surface modifications and treatments using a benchtop SIMS instrument

Science.gov (United States)

McPhail, D. S.; Sokhan, M.; Rees, E. E.; Cliff, B.; Eccles, A. J.; Chater, R. J.

2004-06-01

The development of a novel benchtop SIMS instrument (Millbrook MiniSIMS) [Appl. Surf. Sci. 144 (1999) 106] has brought routine SIMS analysis to many new users, for example museum conservators. This is a result of the simple operation and the relatively low capital cost of the instrument. We report here on the continued development of the system in terms of increasing performance and functionality and its use in museum conservation based applications where a mobile instrument for high throughput, rapid SIMS analysis has proven to be of great benefit to the user. The example we describe here is the application of the MiniSIMS to the analysis of silver thread woven into a silk dress before and after laser cleaning.

Long-term ingestion dose monitoring in a population group with increased 137Cs intake

International Nuclear Information System (INIS)

Bartuskova, M.; Lusnak, J.; Malatova, I.; Pfeiferova, V.; Pospisilova, H.

2008-01-01

137 Cs amounts and ingestion doses in Czech population have been monitored by whole-body counting since the Chernobyl accident. Indirect estimation of the retention through measurement of 137 Cs excreted with urine in 24 hours has also been performed since 1987. The 137 Cs content in human body can be calculated from the urine data provided that the intake of 137 Cs during the period of interest is constant. In a semi-natural environment, the 137 Cs content in mushrooms, wild berries and game decreases due to its natural decay solely. The 137 Cs content in people who mostly consume venison and have been living in an area with elevated contamination has been monitored, mostly through measurement of 137 Cs in urine. In parallel, measurements with a mobile whole-body counter have also been performed. Currently, annual doses from the ingestion of 137 Cs in the inhabitants are very low (0.001 to 0.002 mSv.year -1 ). In a group of hunters in the Jeseniky Mountains (Northern Moravia) the doses were estimated to 0.10 mSv.year -1 . (orig.)

Scanner image methodology (SIM) to measure dimensions of leaves ...

African Journals Online (AJOL)

A scanner image methodology was used to determine plant dimensions, such as leaf area, length and width. The values obtained using SIM were compared with those recorded by the LI-COR leaf area meter. Bias, linearity, reproducibility and repeatability (R&R) were evaluated for SIM. Different groups of leaves were ...

Self Focusing SIMS: Probing thin film composition in very confined volumes

International Nuclear Information System (INIS)

Franquet, Alexis; Douhard, Bastien; Melkonyan, Davit; Favia, Paola; Conard, Thierry; Vandervorst, Wilfried

2016-01-01

that all cluster constituents originate from the same collision cascade and are emitted in close proximity (<0.5 nm). As such, the composition information becomes confined (i.e. self focused) to the areas where all constituents are simultaneously present. The examples shown in this work are based on SiGe compounds and demonstrate that it becomes feasible to determine the composition of thin films in ultra narrow trenches (down to 20 nm in width) with good accuracy and sensitivity. Whereas for the case where the probing beam is focused to a dimension smaller than the width of the structure, the analyzed volume/data point becomes very small (< a few tens of nm 3 ), the simultaneous detection of many atoms from the multiple structures in the Self Focusing SIMS approach, represents effectively a much larger volume providing the abundant sensitivity as the analyzed area is now increased up to 100 μm 2 . On the other hand, the minimum depth probed (in each trench) is still governed by the depth resolution of SIMS, hence it is similar to the one encountered in SIMS experiments performed on blanket films. This can be as small as 1–2 nm/dec and is only limited by the energy of the sputter beam.

The effect of Cs-137 short-range spatial variability on soil after the Chernobyl disaster

Science.gov (United States)

Martynenko, Vladimir; Vakulovsky, Sergey; Linnik, Vitaly

2014-05-01

After the Chernobyl accident of 1986, large areas of Russia were contaminated by 137Cs. Post-depositional redistribution of 137Cs fallout across the land surface resulting from mechanical, physical, chemical, and biological processes operating in the soil system and the grain size selectivity associated with soil erosion and sediment transport processes. Therefore of uppermost importance are data on evaluating 137Cs variability at short distances, obtained at the early period after the accident. Measurements of 137Cs deposit at the territory of Russia exposed to radioactive contamination were mainly conducted with the help of air-gamma survey, and were verified by soil sampling on test plots with size 10x10 m with control soil sampling using "envelope" method of fivefold soil sampling (1 sampling at the centre and 4 along the edges of the plot under study). Presented here are evaluation data of 137Cs contamination, obtained in the Bryansk, Yaroslav and Rostov regions in 1991. Test plots were selected at the distance of 50-100 m away from a road on matted areas with undisturbed soil structure. Test routes of sampling were made perpendicularly to directions crossing basic traces of radioactive contamination. Sampling measurements were carried out at Canberra and Ortec gamma spectrometers. Each of the 5 samples of the "envelope" was measured separately, soil mixing was not applied. 137Cs value for the Bryansk Region varied from 2,6 kBq/m2 to 2294 kBq/m2, at the territories of the Yaroslav and Rostov regions 137Cs value varied from 0,44 kBq/m2 to 5,1 kBq/m2 and 0,56 kBq/m2 to 22,2 kBq/m2, respectively. Statistical analysis of 137Cs deposit at different plots is a solid argumentation in favour of nonuniform distribution in various landscapes and at a different distance from the Chernobyl NPP. Such nonuniformity of 137Cs soil contamination in the limits of 10 m of the plot is most likely to be related to initial aerosol contamination nonuniformity at the moment of

Contact- and Protein Transfer-Dependent Stimulation of Assembly of the Gliding Motility Machinery in Myxococcus xanthus.

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Beata Jakobczak

2015-07-01

Full Text Available Bacteria engage in contact-dependent activities to coordinate cellular activities that aid their survival. Cells of Myxococcus xanthus move over surfaces by means of type IV pili and gliding motility. Upon direct contact, cells physically exchange outer membrane (OM lipoproteins, and this transfer can rescue motility in mutants lacking lipoproteins required for motility. The mechanism of gliding motility and its stimulation by transferred OM lipoproteins remain poorly characterized. We investigated the function of CglC, GltB, GltA and GltC, all of which are required for gliding. We demonstrate that CglC is an OM lipoprotein, GltB and GltA are integral OM β-barrel proteins, and GltC is a soluble periplasmic protein. GltB and GltA are mutually stabilizing, and both are required to stabilize GltC, whereas CglC accumulate independently of GltB, GltA and GltC. Consistently, purified GltB, GltA and GltC proteins interact in all pair-wise combinations. Using active fluorescently-tagged fusion proteins, we demonstrate that GltB, GltA and GltC are integral components of the gliding motility complex. Incorporation of GltB and GltA into this complex depends on CglC and GltC as well as on the cytoplasmic AglZ protein and the inner membrane protein AglQ, both of which are components of the gliding motility complex. Conversely, incorporation of AglZ and AglQ into the gliding motility complex depends on CglC, GltB, GltA and GltC. Remarkably, physical transfer of the OM lipoprotein CglC to a ΔcglC recipient stimulates assembly of the gliding motility complex in the recipient likely by facilitating the OM integration of GltB and GltA. These data provide evidence that the gliding motility complex in M. xanthus includes OM proteins and suggest that this complex extends from the cytoplasm across the cell envelope to the OM. These data add assembly of gliding motility complexes in M. xanthus to the growing list of contact-dependent activities in bacteria.

Hydration-controlled bacterial motility and dispersal on surfaces

DEFF Research Database (Denmark)

Dechesne, Arnaud; Wang, G.; Gulez, Gamze

2010-01-01

hydrated habitats, where water dynamics result in fragmented aquatic habitats connected by micrometric films, is debated. Here, we quantify the spatial dynamics of Pseudomonas putida KT2440 and its nonflagellated isogenic mutant as affected by the hydration status of a rough porous surface using......Flagellar motility, a mode of active motion shared by many prokaryotic species, is recognized as a key mechanism enabling population dispersal and resource acquisition in microbial communities living in marine, freshwater, and other liquid-replete habitats. By contrast, its role in variably...... an experimental system that mimics aquatic habitats found in unsaturated soils. The flagellar motility of the model soil bacterium decreased sharply within a small range of water potential (0 to −2 kPa) and nearly ceased in liquid films of effective thickness smaller than 1.5 μm. However, bacteria could rapidly...

An unsupervised MVA method to compare specific regions in human breast tumor tissue samples using ToF-SIMS.

Science.gov (United States)

Bluestein, Blake M; Morrish, Fionnuala; Graham, Daniel J; Guenthoer, Jamie; Hockenbery, David; Porter, Peggy L; Gamble, Lara J

2016-03-21

Imaging time-of-flight secondary ion mass spectrometry (ToF-SIMS) and principal component analysis (PCA) were used to investigate two sets of pre- and post-chemotherapy human breast tumor tissue sections to characterize lipids associated with tumor metabolic flexibility and response to treatment. The micron spatial resolution imaging capability of ToF-SIMS provides a powerful approach to attain spatially-resolved molecular and cellular data from cancerous tissues not available with conventional imaging techniques. Three ca. 1 mm(2) areas per tissue section were analyzed by stitching together 200 μm × 200 μm raster area scans. A method to isolate and analyze specific tissue regions of interest by utilizing PCA of ToF-SIMS images is presented, which allowed separation of cellularized areas from stromal areas. These PCA-generated regions of interest were then used as masks to reconstruct representative spectra from specifically stromal or cellular regions. The advantage of this unsupervised selection method is a reduction in scatter in the spectral PCA results when compared to analyzing all tissue areas or analyzing areas highlighted by a pathologist. Utilizing this method, stromal and cellular regions of breast tissue biopsies taken pre- versus post-chemotherapy demonstrate chemical separation using negatively-charged ion species. In this sample set, the cellular regions were predominantly all cancer cells. Fatty acids (i.e. palmitic, oleic, and stearic), monoacylglycerols, diacylglycerols and vitamin E profiles were distinctively different between the pre- and post-therapy tissues. These results validate a new unsupervised method to isolate and interpret biochemically distinct regions in cancer tissues using imaging ToF-SIMS data. In addition, the method developed here can provide a framework to compare a variety of tissue samples using imaging ToF-SIMS, especially where there is section-to-section variability that makes it difficult to use a serial hematoxylin

Radioecological studies of {sup 137}Cs in limnological ecosystems. {sup 137}Cs concentrations in water, sediment and biota at the lower region of the famous river in Saitama Prefecture

Energy Technology Data Exchange (ETDEWEB)

Miyake, Sadaaki; Motegi, Misako; Oosawa, Takashi; Nakazawa, Kiyoaki [Saitama Inst. of Public Health, Urawa (Japan); Ogata, Hiromitsu; Izumo, Yoshiro; Nakamura, Fumio

1996-02-01

The concentrations of {sup 137}Cs in water, sediment and biota at the lower region of the famous river in Saitama prefecture were determined in order to elucidate the radioecology of {sup 137}Cs in limnological ecosystems. {sup 137}Cs concentration in water was 0.10 mBq/l. {sup 137}Cs concentrations in sediment, shellfish, Sinotaia quadratus historica (mean for 2 detectable samples), and fish, Carassius auratus cuvieri (mean for 2 detectable samples), were about 6200, 840 and 320 times higher than the concentration of the water, respectively. But {sup 137}Cs radioactivity in the crustacea, Procambarus clarki, was significantly not detected. So, {sup 137}Cs transfer mechanism in the limnological ecosystems was indicated in part. (author).

Evaluation of biomolecular distributions in rat brain tissues by means of ToF-SIMS using a continuous beam of Ar clusters.

Science.gov (United States)

Nakano, Shusuke; Yokoyama, Yuta; Aoyagi, Satoka; Himi, Naoyuki; Fletcher, John S; Lockyer, Nicholas P; Henderson, Alex; Vickerman, John C

2016-06-08

Time-of-flight secondary ion mass spectrometry (ToF-SIMS) provides detailed chemical structure information and high spatial resolution images. Therefore, ToF-SIMS is useful for studying biological phenomena such as ischemia. In this study, in order to evaluate cerebral microinfarction, the distribution of biomolecules generated by ischemia was measured with ToF-SIMS. ToF-SIMS data sets were analyzed by means of multivariate analysis for interpreting complex samples containing unknown information and to obtain biomolecular mapping indicated by fragment ions from the target biomolecules. Using conventional ToF-SIMS (primary ion source: Bi cluster ion), it is difficult to detect secondary ions beyond approximately 1000 u. Moreover, the intensity of secondary ions related to biomolecules is not always high enough for imaging because of low concentration even if the masses are lower than 1000 u. However, for the observation of biomolecular distributions in tissues, it is important to detect low amounts of biological molecules from a particular area of tissue. Rat brain tissue samples were measured with ToF-SIMS (J105, Ionoptika, Ltd., Chandlers Ford, UK), using a continuous beam of Ar clusters as a primary ion source. ToF-SIMS with Ar clusters efficiently detects secondary ions related to biomolecules and larger molecules. Molecules detected by ToF-SIMS were examined by analyzing ToF-SIMS data using multivariate analysis. Microspheres (45 μm diameter) were injected into the rat unilateral internal carotid artery (MS rat) to cause cerebral microinfarction. The rat brain was sliced and then measured with ToF-SIMS. The brain samples of a normal rat and the MS rat were examined to find specific secondary ions related to important biomolecules, and then the difference between them was investigated. Finally, specific secondary ions were found around vessels incorporating microspheres in the MS rat. The results suggest that important biomolecules related to cerebral

Suppressive effects of 3-bromopyruvate on the proliferation and the motility of hepatocellular carcinoma cells.

Science.gov (United States)

Tomizawa, Minoru; Shinozaki, Fuminobu; Motoyoshi, Yasufumi; Sugiyama, Takao; Yamamoto, Shigenori; Ishige, Naoki

2016-01-01

The compound 3-bromopyruvate (3BP) is an analogue of pyruvate, which is the final product of glycolysis that enters the citric acid cycle. The present study aimed to investigate the suppressive effects of 3BP on the proliferation and motility of hepatocellular carcinoma (HCC) cells. HLF and PLC/PRF/5 cells were cultured with 3BP and subjected to an MTS assay. Apoptosis was analyzed by hematoxylin and eosin staining. Cell motility was analyzed using a scratch assay. Real-time quantitative polymerase chain reaction (PCR) was performed to determine the expression levels of cyclin D1 and matrix metalloproteinase (MMP)9. Proliferation of both cell lines was significantly suppressed by 3BP at 100 µM (P<0.05). The expression level of cyclin D1 was decreased after 3BP treatment at 100 µM in both cell lines (P<0.05). Pyknotic nuclei were observed in the cells cultured with 3BP at 100 µM. These results revealed that 3BP suppressed cell proliferation, decreased the expression of cyclin D1, and induced apoptosis in HCC cells. 3BP significantly suppressed motility in both cell lines (P<0.05). The expression level of MMP9 was significantly decreased (P<0.05). 3BP suppressed the proliferation and motility of HCC cells by decreasing the expression of cyclin D1 and MMP9.

Assessment of the efficiency of SimPlate™ total plate count color indicator (TPC CI to quantify mesophilic aerobic microorganisms in pasteurized milk Avaliação da eficiência do SimPlate™ Total Plate Count Color Indicator (TPC CI para enumeração de microrganismos aeróbios mesófilos em leite pasteurizado

Directory of Open Access Journals (Sweden)

Luís Augusto Nero

2002-01-01

Full Text Available The SimPlate™ TPC CI system is a rapid method to count mesophilic aerobic microorganisms (MAM in foods, based on the use of resazurine to indicate bacterial growth. Its efficiency in pasteurized milk was evaluated using 142 pasteurized milk samples (38 type A, 43 type B and 61 type C collected in Londrina, PR. The standard plating method, using Plate Count Agar (PCA was used for comparison. The plates of both systems were incubated at 35ºC and read after 24h and 48h. The occurrence of false-positive and false-negative wells and the predominant microorganisms in them were also evaluated. The results were compared by simple correlation and mean variance analyses. The correlation (r and mean variance values were 0.6811 and 0.7583 for the results obtained after 24h, respectively, and 0.9126 and 0.0842 for the results obtained after 48h, respectively. These results indicate that the performance of the system increases when the plates are incubated for 48h. When the three types of milk were evaluated separately, these values were 0.9285 and 0.0817 for type A milk, 0.9231 and 0.0466 for type B milk and 0.7209 and 0.1082 for type C milk. These results indicate that the better the quality of the milk the better the performance of SimPlate™ TPC CI. False-negative wells, found more frequently in samples with high MAM counts, were caused by Gram positive microorganisms, poorly detected by the SimPlate™ TPC CI system because they grew slowly and had low reduction capacity. The results indicated a higher efficiency of the SimPlate™ TPC CI system in the reading at 48h.O sistema SimPlate™ TPC CI é um método rápido para enumeração de microrganismos aeróbios mesófilos (MAM em alimentos que utiliza a resazurina como substância indicadora de crescimento bacteriano. Para avaliar sua eficiência em leite pasteurizado, 142 amostras (38 de leite tipo A, 43 de leite tipo B e 61 de leite tipo C foram colhidas em Londrina, PR, e analisadas pelo Sim

Quantitative Cs-137 distributions from airborne gamma ray data

International Nuclear Information System (INIS)

Oberlercher, G.; Seiberl, W.

1997-01-01

The Chernobyl reactor accident caused in Austria Cs-137 activities up to 180 kBq/m 2 . The following paper explains how airborne NaJ-spectroscopy, originally designed for geological surveys, was used as an accurate method to obtain the ground activity of Cs-137 in certain regions of Austria. To retrieve the net count rate in a Cs-137 window it is necessary to subtract all background contributions from the peak, including the Compton continuum and the contribution of overlapping peaks. Therefore the measurement of Cs-137 with a NaJ detector system must take into account radioactive elements with gamma-ray lines near the peak energy of Cs-137 at 662 keV. In regions with higher concentrations of the natural radioactive elements uranium and thorium a peak near 600 keV is found, containing the 609 keV line of Bi-214 and the 585 keV line of TI-208. Additionally a Cs-134 line is located at 604 keV. Because of the poor energy resolution of NaJ detectors it is not possible to find a clear separation between these peaks and the Cs-137 peak. The following section describes the method that was used to obtain accurate quantified Cs-137 activity values. (author)

SIMS analysis of extended impact features on LDEF experiment

Science.gov (United States)

Amari, S.; Foote, J.; Jessberger, E. K.; Simon, C.; Stadermann, F. J.; Swan, P.; Walker, R.; Zinner, E.

1991-01-01

Discussed here are the first Secondary Ion Mass Spectroscopy (SIMS) analysis of projectile material deposited in extended impact features on Ge wafers from the trailing edge. Although most capture cells lost their plastic film covers, they contain extended impact features that apparently were produced by high velocity impacts when the plastic foils were still intact. Detailed optical scanning of all bare capture cells from the trailing edge revealed more than 100 impacts. Fifty-eight were selected by scanning electron microscope (SEM) inspection as prime candidates for SIMS analysis. Preliminary SIMS measurements were made on 15 impacts. More than half showed substantial enhancements of Mg, Al, Si, Ca, and Fe in the impact region, indicating micrometeorites as the projectiles.

Crystallization and preliminary X-ray analysis of the TetR-like efflux pump regulator SimR

International Nuclear Information System (INIS)

Le, Tung B. K.; Stevenson, Clare E. M.; Buttner, Mark J.; Lawson, David M.

2011-01-01

Crystals of SimR, a TetR-like efflux pump repressor from S. antibioticus, were obtained and X-ray data were recorded to a resolution of 2.3 Å. Crystals of SimR were grown by vapour diffusion. The protein crystallized with trigonal symmetry and X-ray data were recorded to a resolution of 2.3 Å from a single crystal at the synchrotron. SimR belongs to the TetR family of bacterial transcriptional regulators. In the absence of the antibiotic simocyclinone, SimR represses the transcription of a divergently transcribed gene encoding the simocyclinone efflux pump SimX in Streptomyces antibioticus by binding to operators in the simR–simX intergenic region. Simocyclinone binding causes SimR to dissociate from its operators, leading to expression of the SimX efflux pump. Thus, SimR represents an intimate link between the biosynthesis of simocyclinone and its export, which may also provide the mechanism of self-resistance to the antibiotic in the producer strain

Multi-dimensional TOF-SIMS analysis for effective profiling of disease-related ions from the tissue surface.

Science.gov (United States)

Park, Ji-Won; Jeong, Hyobin; Kang, Byeongsoo; Kim, Su Jin; Park, Sang Yoon; Kang, Sokbom; Kim, Hark Kyun; Choi, Joon Sig; Hwang, Daehee; Lee, Tae Geol

2015-06-05

Time-of-flight secondary ion mass spectrometry (TOF-SIMS) emerges as a promising tool to identify the ions (small molecules) indicative of disease states from the surface of patient tissues. In TOF-SIMS analysis, an enhanced ionization of surface molecules is critical to increase the number of detected ions. Several methods have been developed to enhance ionization capability. However, how these methods improve identification of disease-related ions has not been systematically explored. Here, we present a multi-dimensional SIMS (MD-SIMS) that combines conventional TOF-SIMS and metal-assisted SIMS (MetA-SIMS). Using this approach, we analyzed cancer and adjacent normal tissues first by TOF-SIMS and subsequently by MetA-SIMS. In total, TOF- and MetA-SIMS detected 632 and 959 ions, respectively. Among them, 426 were commonly detected by both methods, while 206 and 533 were detected uniquely by TOF- and MetA-SIMS, respectively. Of the 426 commonly detected ions, 250 increased in their intensities by MetA-SIMS, whereas 176 decreased. The integrated analysis of the ions detected by the two methods resulted in an increased number of discriminatory ions leading to an enhanced separation between cancer and normal tissues. Therefore, the results show that MD-SIMS can be a useful approach to provide a comprehensive list of discriminatory ions indicative of disease states.

{sup 137}Cs in a raised bog in central Sweden

Energy Technology Data Exchange (ETDEWEB)

Rosen, K. [Department of Soil and Environment, Swedish University of Agricultural Sciences, SLU, Ulls vag 17, Box 7014, SE-75007, Uppsala (Sweden)], E-mail: klas.rosen@mv.slu.se; Vinichuk, M. [Department of Soil and Environment, Swedish University of Agricultural Sciences, SLU, Ulls vag 17, Box 7014, SE-75007, Uppsala (Sweden); Department of Ecology, Zhytomyr State Technological University, 103 Cherniakhovsky Str., 10005 Zhytomyr (Ukraine); Johanson, K.J. [Department of Soil and Environment, Swedish University of Agricultural Sciences, SLU, Ulls vag 17, Box 7014, SE-75007, Uppsala (Sweden)

2009-07-15

The vertical distribution of {sup 137}Cs activity in peat soil profiles and {sup 137}Cs activity concentration in plants of various species was studied in samples collected at two sites on a raised bog in central Sweden. One site (open bog) was in an area with no trees and only a few sparsely growing plant species, while the other (low pine) was less than 100 m from the open bog site and had slowly growing Scots pine, a field layer dominated by some ericaceous plants and ground well-covered by plants. The plant samples were collected in 2004-2007 and were compared with samples collected in 1989 from the same open bog and low pine sites. Ground deposition of {sup 137}Cs in 2005 was similar at both sites, 23 000 Bq m{sup -2}. In the open bog peat profile it seems to be an upward transport of caesium since a clear peak of {sup 137}Cs activity was found in the uppermost 1-4 cm of Sphagnum layers, whereas at the low pine site {sup 137}Cs was mainly found in deeper (10-12 cm) layers. The migration rate was 0.57 cm yr{sup -1} at the open bog site and the migration centre of {sup 137}Cs was at a depth of 10.7, while the rate at the low pine site was 0.78 cm yr{sup -1} and the migration centre was at 14.9 cm. Heather (Calluna vulgaris) was the plant species with the highest {sup 137}Cs activity concentrations at both sites, 43.5 k Bq{sup -1} DM in 1989 decreasing to 20.4 in 2004-2007 on open bog and 22.3 k Bq kg{sup -1} DM in 1989 decreasing to 11.2 k Bq{sup -1} DM by the period 2004-2007 on the low pine site. {sup 137}Cs transfer factors in plants varied between 0.88 and 1.35 on the open bog and between 0.48 and 0.69 m{sup 2} kg{sup -1} DM at the low pine site.

Motile hepatocellular carcinoma cells preferentially secret sugar metabolism regulatory proteins via exosomes.

Science.gov (United States)

Zhang, Jing; Lu, Shaohua; Zhou, Ye; Meng, Kun; Chen, Zhipeng; Cui, Yizhi; Shi, Yunfeng; Wang, Tong; He, Qing-Yu

2017-07-01

Exosomes are deliverers of critically functional proteins, capable of transforming target cells in numerous cancers, including hepatocellular carcinoma (HCC). We hypothesize that the motility of HCC cells can be featured by comparative proteome of exosomes. Hence, we performed the super-SILAC-based MS analysis on the exosomes secreted by three human HCC cell lines, including the non-motile Hep3B cell, and the motile 97H and LM3 cells. More than 1400 exosomal proteins were confidently quantified in each MS analysis with highly biological reproducibility. We justified that 469 and 443 exosomal proteins represented differentially expressed proteins (DEPs) in the 97H/Hep3B and LM3/Hep3B comparisons, respectively. These DEPs focused on sugar metabolism-centric canonical pathways per ingenuity pathway analysis, which was consistent with the gene ontology analysis on biological process enrichment. These pathways included glycolysis I, gluconeogenesis I and pentose phosphate pathways; and the DEPs enriched in these pathways could form a tightly connected network. By analyzing the relative abundance of proteins and translating mRNAs, we found significantly positive correlation between exosomes and cells. The involved exosomal proteins were again focusing on sugar metabolism. In conclusion, motile HCC cells tend to preferentially export more sugar metabolism-associated proteins via exosomes that differentiate them from non-motile HCC cells. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Development of a TOF SIMS setup at the Zagreb heavy ion microbeam facility

Science.gov (United States)

Tadić, Tonči; Bogdanović Radović, Iva; Siketić, Zdravko; Cosic, Donny Domagoj; Skukan, Natko; Jakšić, Milko; Matsuo, Jiro

2014-08-01

We describe a new Time-of-flight Secondary Ion Mass Spectrometry (TOF SIMS) setup for MeV SIMS application, which is constructed and installed at the heavy ion microbeam facility at the Ruđer Bošković Institute in Zagreb. The TOF-SIMS setup is developed for high sensitivity molecular imaging using a heavy ion microbeam that focuses ion beams (from C to I) with sub-micron resolution. Dedicated pulse processing electronics for MeV SIMS application have been developed, enabling microbeam-scanning control, incoming ion microbeam pulsing and molecular mapping. The first results showing measured MeV SIMS spectra as well as molecular maps for samples of interest are presented and discussed.

Development of a TOF SIMS setup at the Zagreb heavy ion microbeam facility

International Nuclear Information System (INIS)

Tadić, Tonči; Bogdanović Radović, Iva; Siketić, Zdravko; Cosic, Donny Domagoj; Skukan, Natko; Jakšić, Milko; Matsuo, Jiro

2014-01-01

We describe a new Time-of-flight Secondary Ion Mass Spectrometry (TOF SIMS) setup for MeV SIMS application, which is constructed and installed at the heavy ion microbeam facility at the Ruđer Bošković Institute in Zagreb. The TOF-SIMS setup is developed for high sensitivity molecular imaging using a heavy ion microbeam that focuses ion beams (from C to I) with sub-micron resolution. Dedicated pulse processing electronics for MeV SIMS application have been developed, enabling microbeam-scanning control, incoming ion microbeam pulsing and molecular mapping. The first results showing measured MeV SIMS spectra as well as molecular maps for samples of interest are presented and discussed

Stochastic models of cell motility

DEFF Research Database (Denmark)

Gradinaru, Cristian

2012-01-01

Cell motility and migration are central to the development and maintenance of multicellular organisms, and errors during this process can lead to major diseases. Consequently, the mechanisms and phenomenology of cell motility are currently under intense study. In recent years, a new...... interdisciplinary field focusing on the study of biological processes at the nanoscale level, with a range of technological applications in medicine and biological research, has emerged. The work presented in this thesis is at the interface of cell biology, image processing, and stochastic modeling. The stochastic...... models introduced here are based on persistent random motion, which I apply to real-life studies of cell motility on flat and nanostructured surfaces. These models aim to predict the time-dependent position of cell centroids in a stochastic manner, and conversely determine directly from experimental...

Motility of electric cable bacteria

DEFF Research Database (Denmark)

Bjerg, Jesper Tataru; Damgaard, Lars Riis; Holm, Simon Agner

2016-01-01

Cable bacteria are filamentous bacteria that electrically couple sulfide oxidation and oxygen reduction at centimeter distances, and observations in sediment environments have suggested that they are motile. By time-lapse microscopy, we found that cable bacteria used gliding motility on surfaces...... with a highly variable speed of 0.50.3 ms1 (meanstandard deviation) and time between reversals of 155108 s. They frequently moved forward in loops, and formation of twisted loops revealed helical rotation of the filaments. Cable bacteria responded to chemical gradients in their environment, and around the oxic......-anoxic interface, they curled and piled up, with straight parts connecting back to the source of sulfide. Thus, it appears that motility serves the cable bacteria in establishing and keeping optimal connections between their distant electron donor and acceptors in a dynamic sediment environment....

Emergence and modular evolution of a novel motility machinery in bacteria.

Directory of Open Access Journals (Sweden)

Jennifer Luciano

2011-09-01

Full Text Available Bacteria glide across solid surfaces by mechanisms that have remained largely mysterious despite decades of research. In the deltaproteobacterium Myxococcus xanthus, this locomotion allows the formation stress-resistant fruiting bodies where sporulation takes place. However, despite the large number of genes identified as important for gliding, no specific machinery has been identified so far, hampering in-depth investigations. Based on the premise that components of the gliding machinery must have co-evolved and encode both envelope-spanning proteins and a molecular motor, we re-annotated known gliding motility genes and examined their taxonomic distribution, genomic localization, and phylogeny. We successfully delineated three functionally related genetic clusters, which we proved experimentally carry genes encoding the basal gliding machinery in M. xanthus, using genetic and localization techniques. For the first time, this study identifies structural gliding motility genes in the Myxobacteria and opens new perspectives to study the motility mechanism. Furthermore, phylogenomics provide insight into how this machinery emerged from an ancestral conserved core of genes of unknown function that evolved to gliding by the recruitment of functional modules in Myxococcales. Surprisingly, this motility machinery appears to be highly related to a sporulation system, underscoring unsuspected common mechanisms in these apparently distinct morphogenic phenomena.

PLA-PMMA blends: A study by XPS and ToF-SIMS

International Nuclear Information System (INIS)

Cossement, D.; Gouttebaron, R.; Cornet, V.; Viville, P.; Hecq, M.; Lazzaroni, R.

2006-01-01

This paper reports which are the possibilities of quantification by time of flight secondary ion mass spectrometry (ToF-SIMS) for some polymer blends. In order to assess the composition of the mixtures, we studied first different poly(L-lactide)/polymethylmethacrylate (PLA/PMMA) blends by X-ray photoelectron spectroscopy (XPS), this technique being quantitative. By XPS fitting of the C 1s level, we found a very good agreement of the measured concentrations with the initial compositions. Concerning ToF-SIMS data treatment, we used principal component analysis (PCA) on negative spectra allowing to discriminate one polymer from the other one. By partial least square regression (PLS), we found also a good agreement between the ToF-SIMS predicted and initial compositions. This shows that ToF-SIMS, in a similar way to XPS, can lead to quantitative results. In addition, the observed agreement between XPS (60-100 A depth analyzed) and ToF-SIMS (10 A depth analyzed) measurements show that there is no segregation of one of the two polymers onto the surface

Flagellar Motility of Trypanosoma cruzi Epimastigotes

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G. Ballesteros-Rodea

2012-01-01

Full Text Available The hemoflagellate Trypanosoma cruzi is the causative agent of American trypanosomiasis. Despite the importance of motility in the parasite life cycle, little is known about T. cruzi motility, and there is no quantitative description of its flagellar beating. Using video microscopy and quantitative vectorial analysis of epimastigote trajectories, we find a forward parasite motility defined by tip-to-base symmetrical flagellar beats. This motion is occasionally interrupted by base-to-tip highly asymmetric beats, which represent the ciliary beat of trypanosomatid flagella. The switch between flagellar and ciliary beating facilitates the parasite's reorientation, which produces a large variability of movement and trajectories that results in different distance ranges traveled by the cells. An analysis of the distance, speed, and rotational angle indicates that epimastigote movement is not completely random, and the phenomenon is highly dependent on the parasite behavior and is characterized by directed and tumbling parasite motion as well as their combination, resulting in the alternation of rectilinear and intricate motility paths.

Mammalian Sperm Motility: Observation and Theory

KAUST Repository

Gaffney, E.A.

2011-01-21

Mammalian spermatozoa motility is a subject of growing importance because of rising human infertility and the possibility of improving animal breeding. We highlight opportunities for fluid and continuum dynamics to provide novel insights concerning the mechanics of these specialized cells, especially during their remarkable journey to the egg. The biological structure of the motile sperm appendage, the flagellum, is described and placed in the context of the mechanics underlying the migration of mammalian sperm through the numerous environments of the female reproductive tract. This process demands certain specific changes to flagellar movement and motility for which further mechanical insight would be valuable, although this requires improved modeling capabilities, particularly to increase our understanding of sperm progression in vivo. We summarize current theoretical studies, highlighting the synergistic combination of imaging and theory in exploring sperm motility, and discuss the challenges for future observational and theoretical studies in understanding the underlying mechanics. © 2011 by Annual Reviews. All rights reserved.

SORCE SIM Level 3 Solar Spectral Irradiance Daily Means V020

Data.gov (United States)

National Aeronautics and Space Administration — The SORCE SIM Solar Spectral Irradiance (SSI) data product SOR3SIMD is constructed using measurements from the SIM instruments, which are combined into merged daily...

SORCE SIM Level 3 Solar Spectral Irradiance Daily Means V022

Data.gov (United States)

National Aeronautics and Space Administration — The SORCE SIM Solar Spectral Irradiance (SSI) data product SOR3SIMD is constructed using measurements from the SIM instruments, which are combined into merged daily...

Esophageal motility disorders; Motilitaetsstoerungen des Oesophagus

Energy Technology Data Exchange (ETDEWEB)

Hannig, C.; Rummeny, E. [Klinikum rechts der Isar der Technischen Universitaet Muenchen, Institut fuer Roentgendiagnostik, Muenchen (Germany); Wuttge-Hannig, A. [Gemeinschaftspraxis fuer Radiologie, Nuklearmedizin und Strahlentherapie, Muenchen (Germany)

2007-02-15

For the better understanding of esophageal motility, the muscle texture and the distribution of skeletal and smooth muscle fibers in the esophagus are of crucial importance. Esophageal physiology will be shortly mentioned as far as necessary for a comprehensive understanding of peristaltic disturbances. Besides the pure depiction of morphologic criteria, a complete esophageal study has to include an analysis of the motility. New diagnostic tools with reduced radiation for dynamic imaging (digital fluoroscopy, videofluoroscopy) at 4-30 frames/s are available. Radiomanometry is a combination of a functional pressure measurement and a simultaneous dynamic morphologic analysis. Esophageal motility disorders are subdivided by radiologic and manometric criteria into primary, secondary, and nonclassifiable forms. Primary motility disorders of the esophagus are achalasia, diffuse esophageal spasm, nutcracker esophagus, and the hypertonic lower esophageal sphincter. The secondary motility disorders include pseudoachalasia, reflux-associated motility disorders, functionally caused impactions, Boerhaave's syndrome, Chagas' disease, scleroderma, and presbyesophagus. The nonclassificable motility disorders (NEMD) are a very heterogeneous collective. (orig.) [German] Zum Verstaendnis der Motilitaet des Oesophagus sind muskulaere Architektur und Verteilung der quergestreiften und glatten Muskelfasern von Bedeutung. Die Physiologie des Oesophagus wird in soweit kurz dargestellt, als sie fuer das Verstaendnis von peristaltischen Stoerungen notwendig ist. Neben der Erfassung rein morphologischer Kriterien ist bei der Untersuchung der Speiseroehre eine diagnostische Bewertung der Motilitaet erforderlich. Es stehen uns heute strahlungsarme dynamische Aufzeichnungsverfahren (digitale dynamische Aufzeichnung, Videofluoroskopie) mit Bildsequenzen von 4-30 Bildern/s zur Verfuegung. Die Kombination einer funktionellen Methode zur Darstellung der Morphologie und der

High motility reduces grazing mortality of planktonic bacteria

DEFF Research Database (Denmark)

Matz, Carsten; Jurgens, K.

2005-01-01

We tested the impact of bacterial swimming speed on the survival of planktonic bacteria in the presence of protozoan grazers. Grazing experiments with three common bacterivorous nanoflagellates revealed low clearance rates for highly motile bacteria. High-resolution video microscopy demonstrated...... size revealed highest grazing losses for moderately motile bacteria with a cell size between 0.2 and 0.4 mum(3). Grazing mortality was lowest for cells of >0.5 mum(3) and small, highly motile bacteria. Survival efficiencies of >95% for the ultramicrobacterial isolate CP-1 (less than or equal to0.1 mum......(3), >50 mum s(-1)) illustrated the combined protective action of small cell size and high motility. Our findings suggest that motility has an important adaptive function in the survival of planktonic bacteria during protozoan grazing....

Colonic motility and enema spreading

International Nuclear Information System (INIS)

Hardy, J.G.; Wood, E.; Clark, A.G.; Reynolds, J.R.; Queen's Medical Centre, Nottingham

1986-01-01

Radiolabelled enema solution was administered to eight healthy subjects, both in fasted and fed states. Enema spreading was monitored over a 4-h period using gamma scintigraphy and colonic motility was recorded simultaneously using a pressure sensitive radiotelemetry capsule. The rate and extent of enema dispersion were unaffected by eating. Spreading could be correlated with colonic motility and was inhibited by aboral propulsion of the colonic contents. (orig.)

Systems Engineering and Application of System Performance Modeling in SIM Lite Mission

Science.gov (United States)

Moshir, Mehrdad; Murphy, David W.; Milman, Mark H.; Meier, David L.

2010-01-01

The SIM Lite Astrometric Observatory will be the first space-based Michelson interferometer operating in the visible wavelength, with the ability to perform ultra-high precision astrometric measurements on distant celestial objects. SIM Lite data will address in a fundamental way questions such as characterization of Earth-mass planets around nearby stars. To accomplish these goals it is necessary to rely on a model-based systems engineering approach - much more so than most other space missions. This paper will describe in further detail the components of this end-to-end performance model, called "SIM-sim", and show how it has helped the systems engineering process.

Use of Cs-137 as tracer in lake sediment investigation

International Nuclear Information System (INIS)

Dinescu, L.; Vasile, E.; Timofte, L.; Cernisov, G.; Dorcioman, R.

1997-01-01

137 Cs vertical profile and total inventories were determined in four lakes located in Danube Delta and surroundings and in channel Dunavat. The radiocaesium total inventory of 1800 Bq/m 2 in Matita and Merhei-Middle Part, very closed to the atmospheric fallout value and a very low sedimentation rate, suggest a relative isolation of these two lakes related to the main Danube branches. The vertical profile obtained in Merhei lake (the Southern part) shows three distinct peaks corresponding to nuclear weapons tests performed in 1954 and 1963 and to Chernobyl event in 1986. Radiocaesium total inventory of 3270 Bq/m 2 was explained by an important 137 Cs contribution from the sediment transported by the channel linking lake Merhei to Dunarea Veche (Chilia branch). For the lakes Leahova and Razim, located in the immediate vicinity of the Black Sea, the total inventories of 600 Bq/m2 suggest an important transfer of sediments from the lakes to Black Sea. 137 Cs vertical profile in Dunavat channel shows two peaks, corresponding to Chernobyl event and nuclear tests. The total inventory of 2600 Bq/m 2 is due to atmospheric fallout and to the sediments transported by the river Danube and then by channel Dunavat. The sedimentation rate of 0.7 cm/year obtained from both peaks, suggests a constant sediment accumulation in the last 33 years. Other environmental tracers were used for recent lake sediment dating. The obtained results (considered as preliminary results) were compared with 137 Cs results. The results obtained from 137 Cs, 210 Pb and 241 Am measurements demonstrated that the environmental tracers are a valuable tool in sediment origin, transport and accumulation investigation. The research is in progress. (authors)

Comparison of orbital prosthesis motility following enucleation or evisceration with sclerotomy with or without a motility coupling post in dogs.

Science.gov (United States)

Yi, Na Young; Park, Shin Ae; Jeong, Man Bok; Kim, Won Tae; Kim, Se Eun; Kim, Ji Youn; Chae, Je Min; Jang, Kyoung Jin; Seong, Je Kyung; Seo, Kang Moon

2009-01-01

To evaluate motility of silicone orbital implants and corneoscleral prostheses, with and without use of a motility coupling post (MCP) in dogs. Eighteen mixed-breed dogs. The motility of an orbital silicone implant and corneoscleral prosthesis after enucleation (n = 6), evisceration (n = 6), or use of a MCP with evisceration (n = 6) in dogs were compared. One eye from each dog had surgery whereas the opposite eye was used as a control. Clinical evaluations were performed three times a week. Histopathology of the orbital tissues was performed 8 and 12 weeks after surgery. Implant motility in dogs with evisceration (vertical movement [VM] 8.04 +/- 2.13; horizontal movement [HM] 11 +/- 3.05) and evisceration with MCP (VM 9.61 +/- 1.59); HM was significantly greater than the enucleation group (VM 0.51 +/- 0.5; HM 1.22 +/- 0.68) (P dogs with evisceration with MCP was significantly greater than in dogs with evisceration; dogs with evisceration had significantly greater motility than dogs with enucleation (P dogs. This study supports the use of MCP in silicone orbital implants to enhance corneoscleral prosthesis motility and cosmetics in dogs.

Sorbitol Can Fuel Mouse Sperm Motility and Protein Tyrosine Phosphorylation via Sorbitol Dehydrogenase1

OpenAIRE

Cao, Wenlei; Aghajanian, Haig K.; Haig-Ladewig, Lisa A.; Gerton, George L.

2009-01-01

Energy sources that can be metabolized to yield ATP are essential for normal sperm functions such as motility. Two major monosaccharides, sorbitol and fructose, are present in semen. Furthermore, sorbitol dehydrogenase (SORD) can convert sorbitol to fructose, which can then be metabolized via the glycolytic pathway in sperm to make ATP. Here we characterize Sord mRNA and SORD expression during mouse spermatogenesis and examine the ability of sorbitol to support epididymal sperm motility and t...

Decorporation of cesium-137

International Nuclear Information System (INIS)

Le Fleche, Ph.; Destombe, C.; Grasseau, A.; Mathieu, J.; Chancerelle, Y.; Mestries, J.C.

1997-01-01

Cesium radio-isotopes, especially cesium-137 ( 137 Cs) are among the radionuclides of main importance produced by a fission reaction in reactor or a nuclear weapon explosion. In the environment, 137 Cs is a major contaminant which can cause severe β, γirradiations and contaminations. 137 Cs is distributed widely and relatively uniformly throughout the body with the highest concentration in skeletal muscles. A treatment becomes difficult afterwards. The purposes of this report are Firstly to compare the Prussian blue verses cobalt and potassium ferrocyanide (D.I. blue) efficiency for the 137 Cs decorporation and secondly to assess a chronological treatment with D.I. blue. (author)

Sims, Christopher Albert (born 1942)

NARCIS (Netherlands)

Boumans, Marcel

2015-01-01

Christopher Sims is one of the leaders in time-series econometrics and empirical macroeconomics and is well known for introducing the VAR approach to econometrics and macroeconomic modelling. Sims’ main contribution to empirical macroeconomics was to show how macro-econometric modeling should be

Concentrating cesium-137 from seawater using resorcinol-formaldehyde resin for radioecological monitoring

Energy Technology Data Exchange (ETDEWEB)

Egorin, Andrei; Tokar, Eduard; Tutov, Mikhail; Avramenko, Valentin [Institute of Chemistry FEBRAS, Vladivostok (Russian Federation); Far Eastern Federal Univ., Vladivostok (Russian Federation); Palamarchuk, Marina; Marinin, Dmitry [Institute of Chemistry FEBRAS, Vladivostok (Russian Federation)

2017-04-01

A method of preconcentrating cesium-137 from seawater using a resorcinol-formaldehyde resin, which enables one to optimize the ecological monitoring procedure, has been suggested. Studies of sorption of cesium-137 from seawater by resorcinol-formaldehyde resin have been performed, and it has been demonstrated that the cation exchanger is characterized by high selectivity with respect to cesium-137. It was found that the selectivity depended on the temperature of resin solidification and the seawater pH value. The maximal value of the cesium-137 distribution coefficient is equal to 4.1-4.5 x 10{sup 3} cm{sup 3} g{sup -1}. Under dynamic conditions, the ion-exchange resin capacity is 310-910 bed volumes depending on the seawater pH, whereas the efficiency of cesium removal exceeds 95%. The removal of more than 95% of cesium-137 has been attained using 1-3 M solutions of nitric acid: here, the eluate volume was 8-8.4 bed volumes. Application of 3 M solution of nitric acid results in resin degradation with the release of gaseous products.

Strontium-90 and cesium-137 in soil; April, 1977 to September, 1977

International Nuclear Information System (INIS)

1979-01-01

The samples of rain and dry fallout, air-borne dust, service water and fresh water, soil, sea water, sea sediment, total diet, rice, milk, vegetables, tea, fish, shellfishes and sea weed, and fresh water fishes, their sampling and prior treatment are described. The methods of separating Sr-90 and Cs-137 and their measurement are explained. The estimations of stable Sr, K and Ca are made by atomic absorption spectroscopy, flame spectrophotometry and potassium permanganate titration, respectively. The general plan of radioactivity survey in Japan is shown. As the environmental data, the results of Sr-90 and Cs-137 in soil obtained from April to September, 1977, and the locations of sampling are given. In a table, the months, the locations and the depth of sampling, air soil (%), Sr(%) and the amounts of Sr-90 and Cs-137 (pCi/kg or mCi/km 2 ) are shown. The maximum values are 55 mCi/km 2 of Sr-90 and 150 mCi/km 2 of Cs-137 found in Obama, Nagasaki Prefecture, in July, 1977. (Kako, I.)

Phase 1 Validation Testing and Simulation for the WEC-Sim Open Source Code

Science.gov (United States)

Ruehl, K.; Michelen, C.; Gunawan, B.; Bosma, B.; Simmons, A.; Lomonaco, P.

2015-12-01

WEC-Sim is an open source code to model wave energy converters performance in operational waves, developed by Sandia and NREL and funded by the US DOE. The code is a time-domain modeling tool developed in MATLAB/SIMULINK using the multibody dynamics solver SimMechanics, and solves the WEC's governing equations of motion using the Cummins time-domain impulse response formulation in 6 degrees of freedom. The WEC-Sim code has undergone verification through code-to-code comparisons; however validation of the code has been limited to publicly available experimental data sets. While these data sets provide preliminary code validation, the experimental tests were not explicitly designed for code validation, and as a result are limited in their ability to validate the full functionality of the WEC-Sim code. Therefore, dedicated physical model tests for WEC-Sim validation have been performed. This presentation provides an overview of the WEC-Sim validation experimental wave tank tests performed at the Oregon State University's Directional Wave Basin at Hinsdale Wave Research Laboratory. Phase 1 of experimental testing was focused on device characterization and completed in Fall 2015. Phase 2 is focused on WEC performance and scheduled for Winter 2015/2016. These experimental tests were designed explicitly to validate the performance of WEC-Sim code, and its new feature additions. Upon completion, the WEC-Sim validation data set will be made publicly available to the wave energy community. For the physical model test, a controllable model of a floating wave energy converter has been designed and constructed. The instrumentation includes state-of-the-art devices to measure pressure fields, motions in 6 DOF, multi-axial load cells, torque transducers, position transducers, and encoders. The model also incorporates a fully programmable Power-Take-Off system which can be used to generate or absorb wave energy. Numerical simulations of the experiments using WEC-Sim will be

SIMS prototype system 1 test results: Engineering analysis

Science.gov (United States)

1978-01-01

The space and domestic water solar heating system designated SIMS Prototype Systems 1 was evaluated. The test system used 720 ft (gross) of Solar Energy Products Air Collectors, a Solar Control Corporation SAM 20 Air Handler with Model 75-175 control unit, a Jackson Solar Storage tank with Rho Sigma Mod 106 controller, and 20 tons of rack storage. The test data analysis performed evaluates the system performance and documents the suitability of SIMS Prototype System 1 hardware for field installation.

Measurement of cell motility on proton beam micromachined 3D scaffolds

International Nuclear Information System (INIS)

Zhang, F.; Sun, F.; Kan, J.A. van; Shao, P.G.; Zheng, Z.; Ge, R.W.; Watt, F.

2005-01-01

Tissue engineering is a rapidly developing and highly interdisciplinary field that applies the principles of cell biology, engineering and material science. In natural tissues, the cells are arranged in a three-dimensional (3D) matrix which provides the appropriate functional, nutritional and spatial conditions. In scaffold guided tissue engineering 3D scaffolds provide the critical function of acting as extracellular matrices onto which cells can attach, grow, and form new tissue. The main focus of this paper is to understand cell behavior on micro-grooved and ridged substrates and to study the effects of geometrical constraints on cell motility and cell function. In this study, we found that BAE (Bovine Aortic Endothelial) cells naturally align with and are guided along 3D ridges and grooves machined into polymethylmethacrylate (PMMA) substrates. Average cell speed on micro-grooves and ridges ranged from 0.015 μm/s (for 12 μm wide and 10 μm deep ridges) to 0.025 μm/s (for 20 μm wide and 10 μm deep ridges). This compares with the cell motility rate on a flat PMMA surface where the average cell speed is around 0.012 μm/s. In this work we used scaffolds which were directly written with a focused proton beam, typically 1 MeV protons with a beam spot size of 1 x 1 μm 2

Role of CD137 signaling in dengue virus-mediated apoptosis

International Nuclear Information System (INIS)

Nagila, Amar; Netsawang, Janjuree; Srisawat, Chatchawan; Noisakran, Sansanee; Morchang, Atthapan; Yasamut, Umpa; Puttikhunt, Chunya; Kasinrerk, Watchara

2011-01-01

Highlights: → For the first time the role of CD137 in dengue virus (DENV) infection. → Induction of DENV-mediated apoptosis by CD137 signaling. → Sensitization to CD137-mediated apoptosis by dengue virus capsid protein (DENV C). → Nuclear localization of DENV C is required for CD137-mediated apoptosis. -- Abstract: Hepatic dysfunction is a well recognized feature of dengue virus (DENV) infection. However, molecular mechanisms of hepatic injury are still poorly understood. A complex interaction between DENV and the host immune response contributes to DENV-mediated tissue injury. DENV capsid protein (DENV C) physically interacts with the human death domain-associated protein Daxx. A double substitution mutation in DENV C (R85A/K86A) abrogates Daxx interaction, nuclear localization and apoptosis. Therefore we compared the expression of cell death genes between HepG2 cells expressing DENV C and DENV C (R85A/K86A) using a real-time PCR array. Expression of CD137, which is a member of the tumor necrosis factor receptor family, increased significantly in HepG2 cells expressing DENV C compared to HepG2 cells expressing DENV C (R85A/K86A). In addition, CD137-mediated apoptotic activity in HepG2 cells expressing DENV C was significantly increased by anti-CD137 antibody compared to that of HepG2 cells expressing DENV C (R85A/K86A). In DENV-infected HepG2 cells, CD137 mRNA and CD137 positive cells significantly increased and CD137-mediated apoptotic activity was increased by anti-CD137 antibody. This work is the first to demonstrate the contribution of CD137 signaling to DENV-mediated apoptosis.

Role of CD137 signaling in dengue virus-mediated apoptosis

Energy Technology Data Exchange (ETDEWEB)

Nagila, Amar [Medical Molecular Biology Unit, Office for Research and Development, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok (Thailand); Department of Biochemistry, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok (Thailand); Netsawang, Janjuree [Faculty of Medical Technology, Rangsit University, Bangkok (Thailand); Srisawat, Chatchawan [Department of Biochemistry, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok (Thailand); Noisakran, Sansanee [Dengue Hemorrhagic Fever Research Unit, Office for Research and Development, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok (Thailand); Medical Biotechnology Unit, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Bangkok (Thailand); Morchang, Atthapan; Yasamut, Umpa [Medical Molecular Biology Unit, Office for Research and Development, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok (Thailand); Department of Immunology, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok (Thailand); Puttikhunt, Chunya [Dengue Hemorrhagic Fever Research Unit, Office for Research and Development, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok (Thailand); Medical Biotechnology Unit, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Bangkok (Thailand); Kasinrerk, Watchara [Division of Clinical Immunology, Department of Medical Technology, Faculty of Associated Medical Sciences, Chiang Mai University, Chiang Mai (Thailand); Biomedical Technology Research Center, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency at Chiang Mai University, Chiang Mai (Thailand); and others

2011-07-08

Highlights: {yields} For the first time the role of CD137 in dengue virus (DENV) infection. {yields} Induction of DENV-mediated apoptosis by CD137 signaling. {yields} Sensitization to CD137-mediated apoptosis by dengue virus capsid protein (DENV C). {yields} Nuclear localization of DENV C is required for CD137-mediated apoptosis. -- Abstract: Hepatic dysfunction is a well recognized feature of dengue virus (DENV) infection. However, molecular mechanisms of hepatic injury are still poorly understood. A complex interaction between DENV and the host immune response contributes to DENV-mediated tissue injury. DENV capsid protein (DENV C) physically interacts with the human death domain-associated protein Daxx. A double substitution mutation in DENV C (R85A/K86A) abrogates Daxx interaction, nuclear localization and apoptosis. Therefore we compared the expression of cell death genes between HepG2 cells expressing DENV C and DENV C (R85A/K86A) using a real-time PCR array. Expression of CD137, which is a member of the tumor necrosis factor receptor family, increased significantly in HepG2 cells expressing DENV C compared to HepG2 cells expressing DENV C (R85A/K86A). In addition, CD137-mediated apoptotic activity in HepG2 cells expressing DENV C was significantly increased by anti-CD137 antibody compared to that of HepG2 cells expressing DENV C (R85A/K86A). In DENV-infected HepG2 cells, CD137 mRNA and CD137 positive cells significantly increased and CD137-mediated apoptotic activity was increased by anti-CD137 antibody. This work is the first to demonstrate the contribution of CD137 signaling to DENV-mediated apoptosis.

Relationship between Chlamydia – Mycoplasma – Ureaplasma genital detection and semen concentration and motility among Greek men.

Directory of Open Access Journals (Sweden)

Ageliki Gerovassili

2017-03-01

Full Text Available One hundred and seventy two men at the State of Thessaly, Greece, inquiring semen analysis were enrolled in the study in order to investigate the incidence of Chlamydia, Ureaplasma and Mycoplasma (C-U-M genera in respect to total sperm number (TSN, progressive motility (grades a and b and total motility (grades a, b and c. Putative relation of C-U-M acquirement with sexual behavior was also investigated. Incidence of C-U-M among non-oligozoospermic and oligozoospermic men was similar. Νο correlation of C-U-M carriage to either oligozoospermia or asthenozoospermia was found. The tested semen parameters were negatively correlated to the age of sexual intercourse initiation and positively correlated to the number of sex partners. Early age of sexual intercourse initiation or high number of sexual partners was not statistical significantly correlated to C-U-M acquirement. Overall, TSN and motility (either progressive or total were not influenced by the presence of C-U-M genera in a sample of Greek population undergoing semen evaluation. To distinguish the role of C-U-M in male infertility and clarify the so far controversial scarce literature, large control case studies are needed using nucleic acid amplification techniques to detect these pathogens.

The Pedagogical Benefits of "SimCity" in Urban Geography Education

Science.gov (United States)

Kim, Minsung; Shin, Jungyeop

2016-01-01

This article investigated the pedagogical potential of the "SimCity" simulation game in an urban geography course. University students used "SimCity" to build their own cities and applied a wide range of theories to support their urban structures. Moreover, the students critically evaluated the logic and functioning of the…

Fracture network modeling and GoldSim simulation support

International Nuclear Information System (INIS)

Sugita, Kenichiro; Dershowitz, William

2004-01-01

During Heisei-15, Golder Associates provided support for JNC Tokai through discrete fracture network data analysis and simulation of the MIU Underground Rock Laboratory, participation in Task 6 of the Aespoe Task Force on Modelling of Groundwater Flow and Transport, and development of methodologies for analysis of repository site characterization strategies and safety assessment. MIU Underground Rock Laboratory support during H-15 involved development of new discrete fracture network (DFN) models for the MIU Shoba-sama Site, in the region of shaft development. Golder developed three DFN models for the site using discrete fracture network, equivalent porous medium (EPM), and nested DFN/EPM approaches. Each of these models were compared based upon criteria established for the multiple modeling project (MMP). Golder supported JNC participation in Task 6AB, 6D and 6E of the Aespoe Task Force on Modelling of Groundwater Flow and Transport during H-15. For Task 6AB, Golder implemented an updated microstructural model in GoldSim, and used this updated model to simulate the propagation of uncertainty from experimental to safety assessment time scales, for 5 m scale transport path lengths. Task 6D and 6E compared safety assessment (PA) and experimental time scale simulations in a 200 m scale discrete fracture network. For Task 6D, Golder implemented a DFN model using FracMan/PA Works, and determined the sensitivity of solute transport to a range of material property and geometric assumptions. For Task 6E, Golder carried out demonstration FracMan/PA Works transport calculations at a 1 million year time scale, to ensure that task specifications are realistic. The majority of work for Task 6E will be carried out during H-16. During H-15, Golder supported JNC's Total System Performance Assessment (TSPO) strategy by developing technologies for the analysis of precipitant concentration. These approaches were based on the GoldSim precipitant data management features, and were

Thermo-Regulation of Genes Mediating Motility and Plant Interactions in Pseudomonas syringae

Science.gov (United States)

Hockett, Kevin L.; Burch, Adrien Y.; Lindow, Steven E.

2013-01-01

Pseudomonas syringae is an important phyllosphere colonist that utilizes flagellum-mediated motility both as a means to explore leaf surfaces, as well as to invade into leaf interiors, where it survives as a pathogen. We found that multiple forms of flagellum-mediated motility are thermo-suppressed, including swarming and swimming motility. Suppression of swarming motility occurs between 28° and 30°C, which coincides with the optimal growth temperature of P. syringae. Both fliC (encoding flagellin) and syfA (encoding a non-ribosomal peptide synthetase involved in syringafactin biosynthesis) were suppressed with increasing temperature. RNA-seq revealed 1440 genes of the P. syringae genome are temperature sensitive in expression. Genes involved in polysaccharide synthesis and regulation, phage and IS elements, type VI secretion, chemosensing and chemotaxis, translation, flagellar synthesis and motility, and phytotoxin synthesis and transport were generally repressed at 30°C, while genes involved in transcriptional regulation, quaternary ammonium compound metabolism and transport, chaperone/heat shock proteins, and hypothetical genes were generally induced at 30°C. Deletion of flgM, a key regulator in the transition from class III to class IV gene expression, led to elevated and constitutive expression of fliC regardless of temperature, but did not affect thermo-regulation of syfA. This work highlights the importance of temperature in the biology of P. syringae, as many genes encoding traits important for plant-microbe interactions were thermo-regulated. PMID:23527276

Teaching the Teacher: Tutoring SimStudent Leads to More Effective Cognitive Tutor Authoring

Science.gov (United States)

Matsuda, Noboru; Cohen, William W.; Koedinger, Kenneth R.

2015-01-01

SimStudent is a machine-learning agent initially developed to help novice authors to create cognitive tutors without heavy programming. Integrated into an existing suite of software tools called Cognitive Tutor Authoring Tools (CTAT), SimStudent helps authors to create an expert model for a cognitive tutor by tutoring SimStudent on how to solve…

Temporal variations of Cs-137 in Sots Pine

International Nuclear Information System (INIS)

Nylen, T.; Plamboeck, A.H.; Boson, J.

2008-01-01

In this study the temporal changes in 137 Cs distribution in a Scots pine (Pinus Sylvestris L.) stand was studied during 1986 to 2006 in Northern Sweden. The Chernobyl fallout provided an excellent possibility to study the uptake and retention in conifer trees of 137 Cs, since the deposition lasted for only a few days. The average deposition of 137 Cs in the region that originates from the Chernobyl accident in 1986 was 20 ± 9 kBq M -2 . Also 137 Cs from the atmospheric nuclear weapons tests was present in the area and was only 3 ±2 kBq m -2 . Studies show that the redistribution of radioactive caesium still contribute to high activity concentrations in some compartments of the ecosystem. It has been known that certain fungi continue to produce fruit bodies with high amounts of 137 Cs. The current study adds another aspect to consider: The high activity concentration in branches and current needles during 2006 indicates an uptake of 137 Cs from the soil which could lead to concentrations in Scots Pine that has to be considered in forestry and other kind of utilization of forest products. There are for instance a few game birds such as the capercaillie (Tetrao urogallus) that feed on pine shoots. Another possible effect is on the use of pine branches in the bio fuel industry. Given an activity concentration of 1200 Bq/kg (d.w.) and a concentration factor of 10 during combustion the concentration in ashes would be 12000 bq/kg. According to the recommendations from SSI (the Swedish Radiation Protection Authority) ashes that have concentrations higher than 10 kBq/kg must be stored in special deposits. It would be of interest to investigate the uptake in stands of different ages since the pine stand that was studied was about 30 years old in 1986 and do not represent neither a mature nor a newly established stand (tk)

Uptake and transfer factors of 137Cs by mushrooms

International Nuclear Information System (INIS)

Heinrich, G.

1991-01-01

The 137 Cs content of 118 species (668 samples) of higher fungi collected in the period from August 1984 to October 1989 at three different locations in Styria, Austria, was determined by gamma-spectrometry. The Cs-content of most mushrooms has been increasing since September 1986. In order to find out which factors determine the 137 Cs-contamination of mushrooms and the transfer-value soil to mushroom, the concentration of total and plant-available radiocesium in soils as well as the pH-value, the content of humus, clay, silt, sand, exchangeable cations, the composition of the clay minerals, and the particle size distribution of the soils of two different locations were examined. The higher the 137 Cs contamination of the soil, the thicker the layer of humus and the higher the content of humus, the lower the pH-value, and the lower the amount of essential cations, especially of K + , the higher the amount of 137 Cs plant-available will be. Therefore, the contamination of the mushrooms in the coniferous forest of Koralpenblick (1000 m) is higher than in the mixed forest at the Rosenberg around Graz at approx. 500 m height. Of 26 different species of mushrooms measured at both sites, only 61% show the highest TF-values soil to mushrooms also at the Koralpenblick. In the spruce forest at Koralpenblick there are many species of mushrooms with high 137 Cs-contamination which were not found at the Rosenberg. However, the properties of the species to which a mushroom belongs are more important than environmental conditions and soil properties. The transfer values of 40 K stay within narrow bounds, whereas those of 137 Cs differ widely. (orig.)

Uptake of cesium-137 by crops from contaminated soils

Energy Technology Data Exchange (ETDEWEB)

Demirel, H.; Oezer, I.; Celenk, I.; Halitligil, M.B.; Oezmen, A. [Ankara Nuclear Research and Training Center (Turkey)

1994-11-01

The Turkish tea crop was contaminated following the Chernobyl nuclear accident. Finding ways to dispose of the contaminated tea (Camellia sinensis L.) without damaging the environment was the goal of this research conducted at the Turkish Atomic Energy Authority (TAEA). In this study, an investigation was made of {sup 137}Cs activities of the plants and the ratios of transfer of {sup 137}Cs activity to plants when the contaminated tea was applied to the soil. Experiments were conducted in the field and in pots under greenhouse conditions. The activities of the tea applied in the field ranged from 12 500 to 72 800 Bq/m{sup 2}, whereas this activity was constant at 8000 Bq/pot in the greenhouse experiment. The transfer of {sup 137}Cs from soil to the plants was between 0.037 and 1.057% for wheat (Triticum aestivum L.), barley (Hordeum vulgare L.), corn (Zea mays indentata Sturt), bean (Phaseolus vulgaris L.), lettuce (Lactuca sativa L.), and grass (Lolium perenne L.). The ratio of the transfer of {sup 137}Cs activity to plants increased as the activity {sup 137}Cs in tea applied to soil was increased. The activity in the plants increased due to increased uptake of {sup 137}Cs by plants. 12 refs., 2 figs., 2 tabs.

[Distribution of 137Cs and relative influencing factors on typical karst sloping land].

Science.gov (United States)

Zhang, Xiao-Nan; Wang, Ke-Lin; Zhang, Wei; Chen, Hong-Song; He, Xun-Yang; Zhang, Xin-Bao

2009-11-01

Based on the field survey and the analysis of a large number of soil samples, the distribution of 137 Cs and its influencing factors were studied using 137 Cs tracer technology on typical karst sloping land. The results indicate that the distribution of 137 Cs in soil profile in karst areas show the similar characteristics as that in non-karst areas, fitted an exponential pattern in forest soils and a uniform pattern in cultivated soils. In the sinkhole points in karst areas, 137 Cs exists in deep soil layers and its specific activity vary from 1.7 to 3.3 Bq/kg in soil layers above 45cm, suggesting the existing soil around karst sinkhole is mainly formed by the accumulation of erosion materials. The 137 Cs specific activity in the soil from two rock cracks are 16.8 Bq/kg and 37.6 Bq/kg respectively, which are much higher than that in the soil around the rock, this phenomenon indicates that bare rock is an important influencing factor for 137 Cs spatial movement. With the increment of altitude, the 137 Cs area activity exhibits an irregular fluctuation and evident spatial heterogeneity. On the forest land, the 137 Cs area activities which range from 299.4 to 1 592.6 Bq/m2 are highly positively correlated with the slope gradient and positively correlated with the altitude; while on the cultivated land, the 137 Cs area activities which range from 115.8 to 1478.6 Bq/m2 are negatively correlated with the slope gradient but negatively correlated with the altitude. Topography, geomorphology and human disturbance intensity are the key factors influencing 137 Cs spatial distribution.

Transverse loop colostomy and colonic motility.

Science.gov (United States)

Pucciani, F; Ringressi, M N; Maltinti, G; Bechi, P

2014-11-01

The motility of the defunctionalized colon, distal to transverse loop colostomy, has never been studied "in vivo." The aim of our study was to evaluate the influence of transverse loop colostomy on colonic motility. Thirteen patients were examined before stoma closure by means of clinical evaluation and colonic manometry; we studied both the right and distal colon in both fasting and fed patients in order to detect motor activity. Quantitative and qualitative manometric analyses showed that the diverted colon had motor activity even if no regular colonic motor pattern was observed. The spreading of aboral propagated contractions (PCs) was sometimes recorded from the right colon to the distal colon. The response of the proximal and distal colon to a standard meal, when compared to fasting values, increased more than 40 and 35 %, respectively. Stool and gas ejections from the colostomy were never related to a particular type of colonic motility: Motor quiescence such as PCs was chaotically related to stool escape. In conclusion, motility of the defunctionalized colon is preserved in patients with transverse loop colostomy.

Molecular imaging of alkaloids in khat (Catha edulis) leaves with MeV-SIMS

Science.gov (United States)

Jenčič, Boštjan; Jeromel, Luka; Ogrinc Potočnik, Nina; Vogel-Mikuš, Katarina; Vavpetič, Primož; Rupnik, Zdravko; Bučar, Klemen; Vencelj, Matjaž; Kelemen, Mitja; Matsuo, Jiro; Kusakari, Masakazu; Siketić, Zdravko; Al-Jalali, Muhammad A.; Shaltout, Abdallah; Pelicon, Primož

2017-08-01

Imaging Mass Spectroscopy (IMS) is a unique research tool providing localization and identification of a wide range of biomolecules as essential data to understand biochemical processes in living organisms. Secondary Ion Mass Spectrometry with high-energy heavy ions (MeV-SIMS) is emerging as a promising IMS technique for chemical imaging of biological tissue. We measured the molecular mass spatial distributions in leaves of khat (Catha edulis). Khat is a natural drug plant, native to eastern Africa and the Arabian Peninsula. In these countries, fresh leaves are being chewed by significant part of population. It was reported that 80% of the adult population in Yemen chew the khat leaves. The main stimulating effects of khat are induced by a monoamine alkaloid called cathinone. During leaf ageing, cathinone is further metabolised to cathine and norephedrine. Earlier studies identified the alkaloids in khat, however little is known on their spatial distribution, reflecting the biosynthesis and accumulation in the tissue. Chemical mapping of alkaloids on cross-sections of khat leaves by MeV-SIMS was done at JSI by a pulsed 5.8 MeV 35Cl6+ beam, focused to a diameter of 15 μm, using a linear time-of-flight (TOF) spectrometer with a mass resolution of 500. In addition, measurements of MeV-SIMS mass spectra were performed at Kyoto University by a continuous broad beam of 6 MeV 63Cu4+ ions at an orthogonal TOF spectrometer with a high mass resolution of 11,000. Sections of leaves were analysed and mass spectra obtained at both MeV-SIMS setups were compared. Tissue-level distributions of detected alkaloids are presented and discussed.

Project Status Update and SIM Science Breadth Discussion for the Origins Subcommittee (OS)

Science.gov (United States)

Marr, James C., IV; Shao, Mike

2003-01-01

This viewgraph presentation is composed of two sections The first reviews the features and the science goals of the Space Interferometry Mission (SIM). The goals are: (1) Perform a search for other planetary systems by surveying 2000 nearby stars for astrometric signatures of planetary companion, (2) Survey a sample of 200 nearby stars for orbiting planets down to terrestrial-type masses (3) Improve best current catalog of star positions by >lOOx and extend to fainter stars to allow extension of stellar knowledge to include our entire galaxy (4) Study dynamics and evolution of stars and star clusters in our galaxy to understand how our galaxy was formed and how it will evolve. (5) Calibrate luminosities of important stars and cosmological distance indicators to improve our understanding of stellar processes and to measure precise distance in the distant universe. The presentation also reviews the accomplishments since 2002, the plans for the subsequent 6 months. The second entitled "The Breadth of SIM Science," reviews SIM science goals in a larger context. SIM will serve to complement and pave the way for the Terrestrial Planet Finder (TPF). SIM observations of the motions of stars will tell us about the distribution of all gravitating mass (light plus dark matter) in the Galaxy. SIM observations of the motions of dwarf galaxies around our own will determine the mass distribution (light plus dark matter in the Halo. SIM will greatly extend these observations to test the theories of accretion disks around super massive black holes. SIM has advantages for studying AGN and other very compact objects.

Distribution pattern of 137Cs in carpets of the forest-moss Pleurozium schreiberi

International Nuclear Information System (INIS)

Mattsson, S.; Liden, K.

1974-11-01

The accumulation, retention and internal cycling of the fallout radionuclide 137 Cs (physical half-life = 30.2 a) has been studied in forest moss (Pleurozium schreberi) collected in southern Sweden (56.4 deg N, 14.3 deg E) during the period 1961-1973. The highest 137 Cs-concentrations have been found in the green top parts of the living plants. The study shows that a dominating part of the deposited 137 Cs is available for transport from dying to growing parts of the plants. The elimination of 137 Cs from living moss-plants as well as from dead modd during the period 1968-1973 can be characterized by the same mean residence time, (4 +- 1)a. The radionuclide 137 Cs and the naturally occurring stable element potassium show different behaviour in the moss vegetation, so that the 137 Cs/K-ratio is higher by a factor of approximately 2 in the dead parts of the moss than in the living parts. The vertical distribution of 137 Cs in the moss-covered ground has been studied down to a dry-mass depth of about 100 kg m -2 and can theoretically be described by a model which was earlier empirically deduced for lichen-covered ground (Mattsson, 1972). The relative penetration of 137 Cs is around five times higher in the ground covered by moss-carpets than in the ground covered by lichen-carpets. During the period 1969-1973, the total amount of 137 Cs retained in the moss-carpet was found to be 64.2 +- 2.2 nCi m -2 . (author)

Esophageal motility in eosinophilic esophagitis.

Science.gov (United States)

Weiss, A H; Iorio, N; Schey, R

2015-01-01

Eosinophilic esophagitis (EoE) is characterized by eosinophilic infiltration of the esophagus and is a potential cause of dysphagia and food impaction, most commonly affecting young men. Esophageal manometry findings vary from normal motility to aperistalsis, simultaneous contractions, diffuse esophageal spasm, nutcracker esophagus or hypotonic lower esophageal sphincter (LES). It remains unclear whether esophageal dysmotility plays a significant role in the clinical symptoms of EoE. Our aim is to review the pathogenesis, diagnosis, and effect of treatment on esophageal dysmotility in EoE. A literature search utilizing the PubMed database was performed using keywords: eosinophilic esophagitis, esophageal dysmotility, motility, manometry, impedance planimetry, barium esophagogram, endoscopic ultrasound, and dysphagia. Fifteen studies, totaling 387 patients with eosinophilic esophagitis were identified as keeping in accordance with the aim of this study and included in this review. The occurrence of abnormal esophageal manometry was reported to be between 4 and 87% among patients with EoE. Esophageal motility studies have shown reduced distensibility, abnormal peristalsis, and hypotonicity of the LES in patients with EoE, which may also mimic other esophageal motility disorders such as achalasia or nutcracker esophagus. Studies have shown conflicting results regarding the presence of esophageal dysmotility and symptoms with some reports suggesting a higher rate of food impaction, while others report no correlation between motor function and dysphagia. Motility dysfunction of the esophagus in EoE has not been well reported in the literature and studies have reported conflicting evidence regarding the clinical significance of dysmotility seen in EoE. The correlation between esophageal dysmotility and symptoms of EoE remains unclear. Larger studies are needed to investigate the incidence of esophageal dysmotility, clinical implications, and effect of treatment on

3D molecular imaging SIMS

Energy Technology Data Exchange (ETDEWEB)

Gillen, Greg [Surface and Microanalysis Science Division, National Institute of Standards and Technology, Gaithersburg, MD 20899-8371 (United States)]. E-mail: Greg.gillen@nist.gov; Fahey, Albert [Surface and Microanalysis Science Division, National Institute of Standards and Technology, Gaithersburg, MD 20899-8371 (United States); Wagner, Matt [Surface and Microanalysis Science Division, National Institute of Standards and Technology, Gaithersburg, MD 20899-8371 (United States); Mahoney, Christine [Surface and Microanalysis Science Division, National Institute of Standards and Technology, Gaithersburg, MD 20899-8371 (United States)

2006-07-30

Thin monolayer and bilayer films of spin cast poly(methyl methacrylate) (PMMA), poly(2-hydroxyethyl methacrylate) (PHEMA), poly(lactic) acid (PLA) and PLA doped with several pharmaceuticals have been analyzed by dynamic SIMS using SF{sub 5} {sup +} polyatomic primary ion bombardment. Each of these systems exhibited minimal primary beam-induced degradation under cluster ion bombardment allowing molecular depth profiles to be obtained through the film. By combing secondary ion imaging with depth profiling, three-dimensional molecular image depth profiles have been obtained from these systems. In another approach, bevel cross-sections are cut in the samples with the SF{sub 5} {sup +} primary ion beam to produce a laterally magnified cross-section of the sample that does not contain the beam-induced damage that would be induced by conventional focussed ion beam (FIB) cross-sectioning. The bevel surface can then be examined using cluster SIMS imaging or other appropriate microanalysis technique.

Seeking sunlight: rapid phototactic motility of filamentous mat-forming cyanobacteria optimize photosynthesis and enhance carbon burial in Lake Huron's submerged sinkholes.

Science.gov (United States)

Biddanda, Bopaiah A; McMillan, Adam C; Long, Stephen A; Snider, Michael J; Weinke, Anthony D

2015-01-01

We studied the motility of filamentous mat-forming cyanobacteria consisting primarily of Oscillatoria-like cells growing under low-light, low-oxygen, and high-sulfur conditions in Lake Huron's submerged sinkholes using in situ observations, in vitro measurements and time-lapse microscopy. Gliding movement of the cyanobacterial trichomes (100-10,000 μm long filaments, composed of cells ∼10 μm wide and ∼3 μm tall) revealed individual as well as group-coordinated motility. When placed in a petri dish and dispersed in ground water from the sinkhole, filaments re-aggregated into defined colonies within minutes, then dispersed again. Speed of individual filaments increased with temperature from ∼50 μm min(-1) or ∼15 body lengths min(-1) at 10°C to ∼215 μm min(-1) or ∼70 body lengths min(-1) at 35°C - rates that are rapid relative to non-flagellated/ciliated microbes. Filaments exhibited precise and coordinated positive phototaxis toward pinpoints of light and congregated under the light of foil cutouts. Such light-responsive clusters showed an increase in photosynthetic yield - suggesting phototactic motility aids in light acquisition as well as photosynthesis. Once light source was removed, filaments slowly spread out evenly and re-aggregated, demonstrating coordinated movement through inter-filament communication regardless of light. Pebbles and pieces of broken shells placed upon intact mat were quickly covered by vertically motile filaments within hours and became fully buried in the anoxic sediments over 3-4 diurnal cycles - likely facilitating the preservation of falling debris. Coordinated horizontal and vertical filament motility optimize mat cohesion and dynamics, photosynthetic efficiency and sedimentary carbon burial in modern-day sinkhole habitats that resemble the shallow seas in Earth's early history. Analogous cyanobacterial motility may have played a key role in the oxygenation of the planet by optimizing photosynthesis while favoring

Barriers to bacterial motility on unsaturated surfaces

DEFF Research Database (Denmark)

Dechesne, Arnaud; Smets, Barth F.

2013-01-01

Our knowledge of the spatial organization and spatial dynamics of microbial populations in soil at a scale close to that of the microorganisms is scarce. While passive dispersal via water ow or soil biota is probably a major dispersal route, it is reasonable to consider that active dispersal also...... and their isogenic mutants unable to express various type of motility we aimed to quantify the physical limits of bacterial motility. Our results demonstrate how hydration controls bacterial motility under unsaturated conditions. They can form the base of improved biodegradation models that include microbial...

ChromBiSim: Interactive chromatin biclustering using a simple approach.

Science.gov (United States)

Noureen, Nighat; Zohaib, Hafiz Muhammad; Qadir, Muhammad Abdul; Fazal, Sahar

2017-10-01

Combinatorial patterns of histone modifications sketch the epigenomic locale. Specific positions of these modifications in the genome are marked by the presence of such signals. Various methods highlight such patterns on global scale hence missing the local patterns which are the actual hidden combinatorics. We present ChromBiSim, an interactive tool for mining subsets of modifications from epigenomic profiles. ChromBiSim efficiently extracts biclusters with their genomic locations. It is the very first user interface based and multiple cell type handling tool for decoding the interplay of subsets of histone modifications combinations along their genomic locations. It displays the results in the forms of charts and heat maps in accordance with saving them in files which could be used for post analysis. ChromBiSim tested on multiple cell types produced in total 803 combinatorial patterns. It could be used to highlight variations among diseased versus normal cell types of any species. ChromBiSim is available at (http://sourceforge.net/projects/chrombisim) in C-sharp and python languages. Copyright © 2017 Elsevier Inc. All rights reserved.

137Cs concentration in zooplankton and its relation to taxonomic composition in the western North Pacific Ocean

International Nuclear Information System (INIS)

Kaeriyama, Hideki; Watabe, Teruhisa; Kusakabe, Masashi

2008-01-01

To study the role of zooplankton in the transport of 137 Cs in the ocean, zooplankton samples were collected in October 2005 and June 2006 in the western North Pacific Ocean. The peak zooplankton biomass was observed in the surface layer, and gelatinous plankton was more abundant in October 2005 than in June 2006 reflecting exchange of water masses. The concentrations of 137 Cs in zooplankton varied from 11 to 24 mBq kg wet -1 and were higher in October 2005 than in June 2006. The elevated abundance of gelatinous zooplankton probably led to higher concentration of 137 Cs in zooplankton in October 2005. Annual export fluxes of 137 Cs by ontogenetic vertical migrant copepods were estimated to be 0.8 and 0.6 mBq m -2 year -1 at 200 and 1000 m depths, respectively; this suggested that transport of 137 Cs by zooplankton may be no trivial pathway

Parasites in motion: flagellum-driven cell motility in African trypanosomes

Science.gov (United States)

Hill, Kent L.

2011-01-01

SUMMARY Motility of the sleeping sickness parasite, Trypanosoma brucei, impacts disease transmission and pathogenesis. Trypanosome motility is driven by a flagellum that harbors a canonical 9 + 2 axoneme, together with trypanosome-specific elaborations. Trypanosome flagellum biology and motility have been the object of intense research over the last two years. These studies have led to the discovery of a novel form of motility, termed social motility, and provided revision of long-standing models for cell propulsion. Recent work has also uncovered novel structural features and motor proteins associated with the flagellar apparatus and has identified candidate signaling molecules that are predicted to regulate flagellar motility. Together with earlier inventories of flagellar proteins from proteomic and genomic studies, the stage is now set to move forward with functional studies to elucidate molecular mechanisms and investigate parasite motility in the context of host-parasite interactions. PMID:20591724

{sup 137}Cs in the fungal compartment of Swedish forest soils

Energy Technology Data Exchange (ETDEWEB)

Vinichuk, Mykhaylo M. [Department of General Ecology, University of Agriculture and Ecology, Stary Blvd. 7, Zhytomyr 10001 (Ukraine); Johanson, Karl J.; Taylor, Andy F.S. [Department of Forest Mycology and Pathology, Swedish University of Agricultural Sciences, P.O. Box 7026, Uppsala S-750 07 (Sweden)

2004-05-05

The {sup 137}Cs activities in soil profiles and in the mycelia of four ectomycorrhizal fungi were studied in a Swedish forest in an attempt to understand the mechanisms governing the transfer and retention of {sup 137}Cs in forest soil. The biomass of four species of fungi was determined and estimated to be 16 g m{sup -2} in a peat soil and 47-189 g m{sup -2} in non-peat soil to the depth of 10 cm. The vertical distribution was rather homogeneous for two species (Tylospora spp. and Piloderma fallax) and very superficial for Hydnellum peckii. Most of the {sup 137}Cs activity in mycelium of non-peat soils was found in the upper 5 cm. Transfer factors were quite high even for those species producing resupinate sporocarps. In the peat soil only approximately 0.3% of the total {sup 137}Cs inventory in soil was found in the fungal mycelium. The corresponding values for non-peat soil were 1.3, 1.8 and 1.9%.

In silico reconstitution of actin-based symmetry breaking and motility.

Directory of Open Access Journals (Sweden)

Mark J Dayel

2009-09-01

Full Text Available Eukaryotic cells assemble viscoelastic networks of crosslinked actin filaments to control their shape, mechanical properties, and motility. One important class of actin network is nucleated by the Arp2/3 complex and drives both membrane protrusion at the leading edge of motile cells and intracellular motility of pathogens such as Listeria monocytogenes. These networks can be reconstituted in vitro from purified components to drive the motility of spherical micron-sized beads. An Elastic Gel model has been successful in explaining how these networks break symmetry, but how they produce directed motile force has been less clear. We have combined numerical simulations with in vitro experiments to reconstitute the behavior of these motile actin networks in silico using an Accumulative Particle-Spring (APS model that builds on the Elastic Gel model, and demonstrates simple intuitive mechanisms for both symmetry breaking and sustained motility. The APS model explains observed transitions between smooth and pulsatile motion as well as subtle variations in network architecture caused by differences in geometry and conditions. Our findings also explain sideways symmetry breaking and motility of elongated beads, and show that elastic recoil, though important for symmetry breaking and pulsatile motion, is not necessary for smooth directional motility. The APS model demonstrates how a small number of viscoelastic network parameters and construction rules suffice to recapture the complex behavior of motile actin networks. The fact that the model not only mirrors our in vitro observations, but also makes novel predictions that we confirm by experiment, suggests that the model captures much of the essence of actin-based motility in this system.

Sims for Science: Powerful Tools to Support Inquiry-Based Teaching

Science.gov (United States)

Perkins, Katherine K.; Loeblein, Patricia J.; Dessau, Kathryn L.

2010-01-01

Since 2002, the PhET Interactive Simulations project at the University of Colorado has been working to provide learning tools for students and teachers. The project has developed over 85 interactive simulations--or sims--for teaching and learning science. Although these sims can be used in a variety of ways, they are specifically designed to make…

Surface studies on uranium monocarbide using XPS and SIMS

International Nuclear Information System (INIS)

Asuvathraman, R.

1995-01-01

The air-exposed surfaces of sintered and arc-melted UC samples were examined by XPS and SIMS. XPS results indicate that the surface is covered with a very thin layer of UO 2 mixed with free carbon, which would have formed along with the oxide during the reaction between UC and oxygen or moisture. From the SIMS depth profile of oxygen, the thickness of the oxide layer is found to be approximately 10 nm. The SIMS oxygen images of the surface as a function of etching time reveal that the surface of UC consists of a top layer of adsorbed moisture/oxygen; this contamination layer is followed by a layer containing uranium oxide, uranium hydroxide and free carbon and then grain boundary oxide and finally bulk UC. The behaviour of sintered and arc-melted samples is similar. ((orig.))

Depth profiling using C60+ SIMS-Deposition and topography development during bombardment of silicon

International Nuclear Information System (INIS)

Gillen, Greg; Batteas, James; Michaels, Chris A.; Chi, Peter; Small, John; Windsor, Eric; Fahey, Albert; Verkouteren, Jennifer; Kim, K.J.

2006-01-01

A C 60 + primary ion source has been coupled to an ion microscope secondary ion mass spectrometry (SIMS) instrument to examine sputtering of silicon with an emphasis on possible application of C 60 + depth profiling for high depth resolution SIMS analysis of silicon semiconductor materials. Unexpectedly, C 60 + SIMS depth profiling of silicon was found to be complicated by the deposition of an amorphous carbon layer which buries the silicon substrate. Sputtering of the silicon was observed only at the highest accessible beam energies (14.5 keV impact) or by using oxygen backfilling. C 60 + SIMS depth profiling of As delta-doped test samples at 14.5 keV demonstrated a substantial (factor of 5) degradation in depth resolution compared to Cs + SIMS depth profiling. This degradation is thought to result from the formation of an unusual platelet-like grain structure on the SIMS crater bottoms. Other unusual topographical features were also observed on silicon substrates after high primary ion dose C 60 + bombardment

Wild mushroom contamination by 137Cs in Central Slovakia region in 2011

International Nuclear Information System (INIS)

Durecova, Alzbeta; Durec, F.; Auxtova, L.; Cechova, A.

2012-01-01

A total of 98 wild mushrooms (24 species collected at 26 sites) were analyzed for 137 Cs in 2011. The radionuclide was determined separately in the caps and the stipes of the majority of the mushrooms species. The highest activities were found in the genera Boletus, Leccinum, Lactarius and Russula whereas the lowest activities were found in Amanita. In the vast majority of mushrooms, the cap-to-stipe 137 Cs activity ratio was larger than 1. The cap-to-stipe 137 Cs activity ratio did not correlate with the cap-to-stipe 40 K activity ratio in Russula or Amanita. The cap of a Boletus pulverulentus specimen collected at Skalka pri Kremnici in August had a 137 Cs activity 190 Bq/kg fresh sample. For an individual who ate 10 kg of fresh caps of this mushroom during a year, their committed effective dose estimate is 0.025 mSv/year (adults) or 0.019 mSv/year (children aged 10). (orig.)

137Cs in soil profiles in NE Estonia

International Nuclear Information System (INIS)

Lust, M.; Realo, K.; Realo, E.

2002-01-01

Radiocaesium contamination in soil was produced by two fallout's: a global fallout caused by nuclear weapons testing in the atmosphere (1950s to 1970s) and a regional one - during/after the Chernobyl accident (1986). The area] distribution of the 137 CS fallout after the 1986 accident was extremely uneven in Estonia. Our previous studies showed that about 60% of its total deposition with the countrywide mean of 2 kBq m -2 occurred predominantly in the north-eastern part of Estonia. In this region the maximum deposition approached the values of 40 kBq m -2 . This is the reason why soil profiles in this region have been of interest. We have also determined the 137 Cs activity concentrations as a function of soil depth during 1991-2000. Attempts have been made to model the found depth-distributions of radiocaesium concentration and to find the possible time-dependent behaviour of these distributions in soil. The migration of radiocaesium into soil is dependent on several factors: soil properties, vegetation, mode of deposition, etc. For this reason, averaged distribution parameters for both total and Chernobyl 137 Cs have been used for deriving general trends of the migration processes. (au)

Pilot unit for cesium-137 separation; Unite pilote de separation du cesium-137

Energy Technology Data Exchange (ETDEWEB)

Raggenbass, A; Quesney, M; Fradin, J; Dufrene, J [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

1958-07-01

Users of radiation are becoming increasingly interested in cesium-137. At the same time the starting up of the industrial plant at Marcoule will make available in the near future large stocks of fission products which should be made use of as quickly as possible. The installation described is a pilot plant for cesium-137 production which should make it possible: - to verify the chemical method on actual solutions of fission products, by treating about 100 curies of {sup 137}Cs by operation, - to obtain technical information on the chemical equipment (tele-commands, corrosion, maintenance, etc...), - to obtain {sup 137}Cs in sufficient quantity to perfect the technique of the manufacture of sealed sources. (author)Fren. [French] L'interet des utilisateurs de rayonnement se porte de plus en plus vers le caesium-137. Parallelement, la mise en oeuvre de l'ensemble industriel de Marcoule nous permettra de disposer dans un avenir proche de stocks importants de produits de fission qu'il sera interessant de valoriser au plus vite. L'installation que nous decrivons est un pilote de production de caesium-137 qui doit nous permettre: - de verifier la methode chimique sur des solutions de produits de fission reelles en traitant environ 100 curies de {sup 137}Cs par operation; - d'obtenir des renseignements techniques sur l'appareillage chimique (telecommandes, corrosion, entretien, etc...); - d'obtenir du {sup 137}Cs en quantite suffisante pour mettre au point la technique de fabrication des sources scellees. (auteur)

DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation.

Science.gov (United States)

Sherfey, Jason S; Soplata, Austin E; Ardid, Salva; Roberts, Erik A; Stanley, David A; Pittman-Polletta, Benjamin R; Kopell, Nancy J

2018-01-01

DynaSim is an open-source MATLAB/GNU Octave toolbox for rapid prototyping of neural models and batch simulation management. It is designed to speed up and simplify the process of generating, sharing, and exploring network models of neurons with one or more compartments. Models can be specified by equations directly (similar to XPP or the Brian simulator) or by lists of predefined or custom model components. The higher-level specification supports arbitrarily complex population models and networks of interconnected populations. DynaSim also includes a large set of features that simplify exploring model dynamics over parameter spaces, running simulations in parallel using both multicore processors and high-performance computer clusters, and analyzing and plotting large numbers of simulated data sets in parallel. It also includes a graphical user interface (DynaSim GUI) that supports full functionality without requiring user programming. The software has been implemented in MATLAB to enable advanced neural modeling using MATLAB, given its popularity and a growing interest in modeling neural systems. The design of DynaSim incorporates a novel schema for model specification to facilitate future interoperability with other specifications (e.g., NeuroML, SBML), simulators (e.g., NEURON, Brian, NEST), and web-based applications (e.g., Geppetto) outside MATLAB. DynaSim is freely available at http://dynasimtoolbox.org. This tool promises to reduce barriers for investigating dynamics in large neural models, facilitate collaborative modeling, and complement other tools being developed in the neuroinformatics community.

Fallout 137Cs in reindeer herders in Arctic Norway.

Science.gov (United States)

Skuterud, Lavrans; Thørring, Håvard

2015-03-03

Reindeer herders in the Arctic were among the most heavily exposed populations to the global fallout from nuclear weapons testing in the 1950s and 1960s, due to high transfer of radionuclides in the lichens-reindeer-human food chain. Annual studies of (137)Cs in reindeer herders in Kautokeino, Norway, were initiated in 1965 to monitor radiation doses and follow environmental (137)Cs behavior. The (137)Cs concentrations declined from the peak in 1965 with effective half-times of 6-8 years, only interrupted by a temporary doubling in levels from 1986 to 1987 due to the Chernobyl fallout. During the period of 1950-2010 an average herder received an integrated effective dose from incorporated (137)Cs of about 18 mSv. This dose represents an insignificant increase in the risk for developing cancer. Health studies even show a significantly lower cancer incidence among Sámis and reindeer herders in northern Norway compared to other populations in the same area.

The Structured Inventory of Malingered Symptomatology (SIMS): a systematic review and meta-analysis.

Science.gov (United States)

van Impelen, Alfons; Merckelbach, Harald; Jelicic, Marko; Merten, Thomas

2014-01-01

We meta-analytically reviewed studies that used the Structured Inventory of Malingered Symptomatology (SIMS) to detect feigned psychopathology. We present weighted mean diagnostic accuracy and predictive power indices in various populations, based on 31 studies, including 61 subsamples and 4009 SIMS protocols. In addition, we provide normative data of patients, claimants, defendants, nonclinical adults, and various experimental feigners, based on 41 studies, including 125 subsamples and 4810 SIMS protocols. We conclude that the SIMS (1) is able to differentiate well between instructed feigners and honest responders; (2) generates heightened scores in groups that are known to have a raised prevalence of feigning (e.g., offenders who claim crime-related amnesia); (3) may overestimate feigning in patients who suffer from schizophrenia, intellectual disability, or psychogenic non-epileptic seizures; and (4) is fairly robust against coaching. The diagnostic power of the traditional cut scores of the SIMS (i.e., > 14 and > 16) is not so much limited by their sensitivity—which is satisfactory—but rather by their substandard specificity. This, however, can be worked around by combining the SIMS with other symptom validity measures and by raising the cut score, although the latter solution sacrifices sensitivity for specificity.

Exploratory Research on Latent Esophageal Motility Disorders in Dysphagia Patients.

Science.gov (United States)

Kawaguchi, Shinpei; Takeuchi, Toshihisa; Inoue, Yousuke; Takahashi, Yoshiaki; Ozaki, Haruhiko; Ota, Kazuhiro; Harada, Satoshi; Edogawa, Shoko; Kojima, Yuichi; Yamashita, Hiroshi; Fukuchi, Takumi; Ashida, Kiyoshi; Higuchi, Kazuhide

2017-01-01

High-resolution manometry (HRM) has been applied to assess esophageal motility disorders. However, the frequency and types of motility disorders in patients with dysphagia, which are frequently seen in clinical practice, are not clear. We evaluated latent esophageal motility disorders associated with dysphagia. The study included patients without erosive esophageal mucosal damage and with dysphagia symptoms refractory to at least 8 weeks of standard-dose proton pump inhibitors. After enrolment, HRM was used to evaluate for esophageal motility disorder based on the Chicago classification. Esophageal motility disorder was found in 58 of 100 patients and was classified based on the causes: achalasia (13%), esophagogastric junction outflow obstruction (16%), distal esophageal spasms (3%), weak peristalsis (14%), frequently failed peristalsis (5%), and hypertensive peristalsis (7%). Primary esophageal motility disorder was found in approximately 50% of cases in dysphagia patients. Therefore, esophageal motility disorder is not an uncommon condition and should be sought for in order to elucidate precisely the cause of dysphagia. © 2017 S. Karger AG, Basel.

137Cs in man organism

International Nuclear Information System (INIS)

Marej, A.N.; Barkhudarov, R.M.

1980-01-01

Considered are the levels of 137 Cs content in the organism of adult urban population of the USSR and the main regularities of their alterations during 1962-1974. The non-uniform distribution of levels of 137 Cs buildup in adult population is shown to be connected with soil and geographic conditions. Food stuffs of local production have a noticeable effect on the levels of 137 Cs buildup in the organism of urban population. Calculation methods are used to study 137 Cs administration in a human organism. No significant difference is found between the indexes of 137 Cs content in the organism of rural and urban population. Presented are the levels of 137 Cs content in the organisms of inhabitants of such regions as Far North and Byelorussian-Ukrainian woodlands. Given are the reasons for the increased content of 137 Cs in the organism of rural population of these zones

SimCP3—An Advanced Homologue of SimCP2 as a Solution-Processed Small Molecular Host Material for Blue Phosphorescence Organic Light-Emitting Diodes

Directory of Open Access Journals (Sweden)

Yi-Ting Lee

2016-09-01

Full Text Available We have overcome the synthetic difficulty of 9,9′,9′′,9′′′,9′′′′,9′′′′′-((phenylsilanetriyltris(benzene-5,3,1-triylhexakis(9H-carbazole (SimCP3 an advanced homologue of previously known SimCP2 as a solution-processed, high triplet gap energy host material for a blue phosphorescence dopant. A series of organic light-emitting diodes based on blue phosphorescence dopant iridium (III bis(4,6-difluorophenylpyridinatopicolate, FIrpic, were fabricated and tested to demonstrate the validity of solution-processed SimCP3 in the device fabrication.

Pharyngeal swallowing and oesophageal motility during a solid meal test: a prospective study in healthy volunteers and patients with major motility disorders.

Science.gov (United States)

Hollenstein, Michael; Thwaites, Philip; Bütikofer, Simon; Heinrich, Henriette; Sauter, Matthias; Ulmer, Irina; Pohl, Daniel; Ang, Daphne; Eberli, Daniel; Schwizer, Werner; Fried, Michael; Distler, Oliver; Fox, Mark; Misselwitz, Benjamin

2017-09-01

The factors that determine how people eat when they are healthy or have disease have not been defined. We used high resolution manometry (HRM) to assess pharyngeal swallowing and oesophageal motility during ingestion of a solid test meal (STM) in healthy volunteers and patients with motility disorders. This study was based at University Hospital Zurich (Zürich, Switzerland). Healthy volunteers who responded to an advertisement completed HRM with ten single water swallows (SWS) in recumbent and upright positions followed by a 200 g rice STM in the upright position. Healthy volunteers were stratified for age and sex to ensure a representative population. For comparison, consecutive patients with major motility disorders on SWS and patients with dysphagia but no major motility disorders on SWS (disease controls) were selected from a database that was assembled prospectively; the rice meal data were analysed retrospectively. During STM, pharyngeal swallows were timed and oesophageal contractions were classified as representing normal motility or different types of abnormal motility in accordance with established metrics. Factors that could potentially be associated with eating speed were investigated, including age, sex, body-mass index, and presence of motility disorder. We compared diagnoses based on SWS findings, assessed with the Chicago Classification v3.0, with those based on STM findings, assessed with the Chicago Classification adapted for solids. These studies are registered with ClinicalTrials.gov, numbers NCT02407938 and NCT02397616. Between April 2, 2014, and May 13, 2015, 72 healthy volunteers were recruited and underwent HRM. Additionally, we analysed data from 54 consecutive patients with major motility disorders and 53 with dysphagia but no major motility disorders recruited between April 2, 2013, and Dec 18, 2014. We found important variations in oesophageal motility and eating speed during meal ingestion in healthy volunteers and patients. Increased

137Cs contamination of the Techa river flood plain near the village of Muslumovo

International Nuclear Information System (INIS)

Chesnokov, A.V.; Govorun, A.P.; Linnik, V.G.; Shcherbak, S.B.

2000-01-01

The results of a radiometric survey of the Techa river flood plain near the village of Muslumovo in the Chelyabinsk region of Russia are presented. The observed territory extended 16.6 km along the riverbed, with a total area of 2.5 km 2 . The collimated scintillation detector technique was applied to in situ field measurements of 137 Cs deposition on the soil. Maps of 137 Cs deposition and soil penetration depth were developed on the basis of approximately 5000 measurements. The total 137 Cs deposition within the surveyed territory has been estimated at 6.6 TBq. The means of the total 137 Cs soil depositions at half-kilometer sites on the flood plain and its distribution along the river have also been calculated. A maximum 137 Cs contamination above 7.5 MBq/m 2 is associated with a bank height up to 1 m above the usual water level. The data identify zones of intensive radionuclide sedimentation and transit zones

Soil erosion determination in an watershed from Northern Parana (Brazil) using 137Cs

International Nuclear Information System (INIS)

Andrello, Avacir Casanova; Appoloni, Carlos Roberto; Guimaraes, Maria de Fatima

2004-01-01

The objective of this work was study the soil losses or gains in a watershed in the municipal district of Ca mbe, P R, Brazil using 137 Cs as marker for the determination of soil redistributions. A transect sampling was used to evaluate the influence of different tillage on soil erosion. One point, located in a forest area was sampled and analyzed to determine the reference inventory of cesium-137 deposited by fallout. The average value of the reference inventory was 292 Bq m -2 . The cesium-137 inventory of the transect samples varied from 80 Bq m -2 to 403 Bq m -2 . The sampling points in pasture presented soil losses. The sampling points in coffee plantation did not present losses or gains. The sampling points in soybean cultivated areas presented soil losses. (author)

Applications of Cs-137 and soil trapping methods for studying slope processes in the Carpathian foothills

Directory of Open Access Journals (Sweden)

Chelmicki, Wojciech

1992-06-01

Full Text Available Areas of soil degradation and sedimentation have been delimited within a single, representative for the Carpathian Foothills, slope profile. Two methods: Cs-137 and soil trapping have been used. Soil degradation on the slope used as a pastureland is generally small, with the most intensive degradation in the mid slope. Once the slope was cultivated the process of erosion and soil wash must have been more intensive which is evidenced by high Cs-137 content within the valley bottom deposits. High Cs-137 content within forested ecosystems results from good Cs-137 trapping efficiency of forests rather than from the soil deposition.

[es] Aplicación del Cs-137 y de métodos de trampeo de suelo para estudiar procesos de ladera en el piedemonte de los Cárpatos. Se han delimitado las áreas afectadas por erosión y sedimentación en un perfil de ladera, representativo del piedemonte de los Cárpatos. Se han empleado dos métodos: Cesio-137 y trampas de sedimentos. Se ha demostrado que la erosión del suelo en laderas utilizadas para pastos es generalmente pequeña, apareciendo las degradaciones más intensas a media ladera. Cuando la ladera estaba cultivada, los procesos de erosión debían ser más intensos, como lo evidencia el alto contenido de Cs-137 en los depósitos de fondo de valle. El elevado contenido de Cs-137 en ecosistemas forestales se debe a la eficacia de los bosques para atrapar el Cs-137, más que a la sedimentación.
[de] Anwendung der Cs-137 und der Fangmethode zur bestimmung der Hangvorgänge im Karpatenhügelland. Entlang eines Hangprofíls innerhalb des Karpatenhügellandes sind Stellen ermitteit worden an denen, entweder Erosion oder Deposition festgestellt wurden. Das wurde aufgrund zweier fvlethoden bestimmt: anhand des radioaktiven Cs-137 und der Menge des erodierten Materials in eigens für diesen Zweck hergestellten Auffangbehältern. Es wurde festgestellt, dass aufeinem ais Weide genutzten Han die Intensit

Concentrations of 137Cs and trace elements in zooplankton, and their vertical distributions off Rokkasho, Japan

International Nuclear Information System (INIS)

Kaeriyama, Hideki; Ishii, Toshiaki; Watabe, Teruhisa; Kusakabe, Masashi

2007-01-01

Zooplankton samples were collected at about 50 m depth with a large ring net (160-cm mouth diameter, 0.5-mm mesh) in May, June, October 2005 and June 2006 off Rokkasho, Japan where a nuclear fuel reprocessing plant will be in full-scale operation in the near future. Plankters in each sample were separated based on their species. Eight samples were used for the determination of 137 Cs concentration and the other 21 samples were used for the determination of its stable isotope, Cs along with some other trace elements. All the samples were characterized by five dominant species, i.e. euphausiids, chaetognaths, copepods; Neocalanus spp., amphipods; Themisto spp. and Cyphocaris sp. Plankton samples were also taken at three to five discrete depths between the surface and ≤ 1,000 m in depth during daytime and nighttime for analysis of vertical distribution patterns of biomass, and for assessment of daily vertical migration activity. Integrated net zooplankton biomass at nighttime ranged from 0.85 to 8.74 g-DW m -2 in the 0-150 m layer without any appreciable day-night differences in the vertical distribution; below the layer, it decreased significantly. Only in spring, appreciable day-night differences in the vertical distribution were observed at the shallowest station. Concentrations of Cs and Co did not show significant difference among the five species. However, higher concentrations of Sr were observed in two amphipods. It is likely that amphipods had a different biological process in Sr metabolism from others. The concentration of 137 Cs in zooplankton was usually very low and sometimes under the detection limit. In the present study, the highest concentration of 137 Cs in zooplankton was 24 mBq kg-WW -1 , corresponding to the concentration factor (CF) of 14, if the value of 1.7 mBq L -1 was given to the 137 Cs concentration in seawater. The water-column inventory of 137 Cs in a zooplankton community is calculated to be 0.29 to 1.95 mBq m -2 , based on the data on

Chemical Visualization of Sweat Pores in Fingerprints Using GO-Enhanced TOF-SIMS.

Science.gov (United States)

Cai, Lesi; Xia, Meng-Chan; Wang, Zhaoying; Zhao, Ya-Bin; Li, Zhanping; Zhang, Sichun; Zhang, Xinrong

2017-08-15

Time-of-flight secondary ion mass spectrometry (TOF-SIMS) has been used in imaging of small molecules (SIMS was used to detect and image relatively high mass molecules such as poison, alkaloids (>600 Da) and controlled drugs, and antibiotics (>700 Da) in fingerprints. Detail features of fingerprints such as the number and distribution of sweat pores in a ridge and even the delicate morphology of one pore were clearly revealed in SIMS images of relatively high mass molecules. The detail features combining with identified chemical composition were sufficient to establish a human identity and link the suspect to a crime scene. The wide detectable mass range and high spatial resolution make GO-enhanced TOF-SIMS a promising tool in accurate and fast analysis of fingerprints, especially in fragmental fingerprint analysis.

Preparing strategic information management plans for hospitals: a practical guideline SIM plans for hospitals: a guideline.

Science.gov (United States)

Brigl, B; Ammenwerth, E; Dujat, C; Gräber, S; Grosse, A; Häber, A; Jostes, C; Winter, A

2005-01-01

Systematic information management in hospitals demands for a strategic information management plan (SIM plan). As preparing a SIM plan is a considerable challenge we provide a practical guideline that is directly applicable when a SIM plan is going to be prepared. The guideline recommends a detailed structure of a SIM plan and gives advice about its content and the preparation process. It may be used as template, which can be adapted to the individual demands of any hospital. The guideline was used in several hospitals preparing a SIM plan. Experiences showed that the SIM plans could be prepared very efficiently and timely using the guideline, that the proposed SIM plan structure suited well, that the guideline offers enough flexibility to meet the requirements of the individual hospitals and that the specific recommendations of the guideline were very helpful. Nevertheless, we must strive for a more comprehensive theory of strategic information management planning which -- in the sense of enterprise architecture planning -- represents the intrinsic correlations of the different parts of a SIM plan to a greater extent.

Revised mechanism of Boyland-Sims oxidation.

Science.gov (United States)

Marjanović, Budimir; Juranić, Ivan; Cirić-Marjanović, Gordana

2011-04-21

New computational insights into the mechanism of the Boyland-Sims oxidation of arylamines with peroxydisulfate (S(2)O(8)(2-)) in an alkaline aqueous solution are presented. The key role of arylnitrenium cations, in the case of primary and secondary arylamines, and arylamine dications and immonium cations, in the case of tertiary arylamines, in the formation of corresponding o-aminoaryl sulfates, as prevalent soluble products, and oligoarylamines, as prevalent insoluble products, is proposed on the basis of the AM1 and RM1 computational study of the Boyland-Sims oxidation of aniline, ring-substituted (2-methylaniline, 3-methylaniline, 4-methylaniline, 2,6-dimethylaniline, anthranilic acid, 4-aminobenzoic acid, sulfanilic acid, sulfanilamide, 4-phenylaniline, 4-bromoaniline, 3-chloroaniline, and 2-nitroaniline) and N-substituted anilines (N-methylaniline, diphenylamine, and N,N-dimethylaniline). Arylnitrenium cations and sulfate anions (SO(4)(2-)) are generated by rate-determining two-electron oxidation of primary and secondary arylamines with S(2)O(8)(2-), while arylamine dications/immonium cations and SO(4)(2-) are initially formed by two-electron oxidation of tertiary arylamines with S(2)O(8)(2-). The subsequent regioselectivity-determining reaction of arylnitrenium cations/arylamine dications/immonium cations and SO(4)(2-), within the solvent cage, is computationally found to lead to the prevalent formation of o-aminoaryl sulfates. The formation of insoluble precipitates during the Boyland-Sims oxidation of arylamines was also computationally studied.

Motility of copepod nauplii and implications for food encounter

DEFF Research Database (Denmark)

Titelman, Josefin; Kiørboe, Thomas

2003-01-01

(Centropages typicus, Calanus helgolandicus, Temora longicornis, Acartia tonsa, Eurytemora affinis and Euterpina acutifrons). Behaviors of individual nauphi were divided into sequences of sinking, swimming and jumping events. Motility behavior is both stage- and species-specific in terms of appearance......Velocity differences drive all encounter processes. Therefore, knowledge of both prey and predator motility are essential in order to understand feeding behavior and predict food acquisition rates. Here, we describe and quantify the motility behavior of young and old naupliar stages of 6 copepods...... of tracks, speeds, durations and frequencies of events as well as time budgets. Motility mode often changes drastically during naupliar ontogeny. Crudely, nauplii can be divided into those moving with a jump-sink type of motility of various frequencies (1 min(-1) to 3 s(-1)) and those swimming...

Accumulation of 137Cs in Brazilian soils and its transfer to plants under different climatic conditions

International Nuclear Information System (INIS)

Handl, J.; Sachse, R.; Jakob, D.; Michel, R.; Evangelista, H.; Goncalves, A.C.; Freitas, A.C. de

2008-01-01

The spatial distribution and behaviour of the global fallout 137 Cs in the tropical, subtropical and equatorial soil-plant systems were investigated at several upland sites in Brazil selected according to their climate characteristics, and to the agricultural importance. To determine the 137 Cs deposition density, undisturbed soil profiles were taken from 23 environments situated between the latitudes of 02 o N and 30 o S. Sampling sites located along to the equator exhibited 137 Cs deposition densities with an average value of 219 Bq m -2 . Extremely low deposition densities of 1.3 Bq m -2 were found in the Amazon region. In contrast, the southern part of Brazil, located between latitudes of 20 o S and 34 o S, exhibited considerably higher deposition densities ranging from 140 Bq m -2 to 1620 Bq m -2 . To examine the 137 Cs soil-to-plant transfer in the Brazilian agricultural products, 29 mainly tropical plant species, and corresponding soil samples were collected at 43 sampling locations in nine federal states of Brazil. Values of the 137 Cs concentration factor plant/soil exhibited a large range from 0.020 (beans) to 6.2 (cassava). Samples of some plant species originated from different collecting areas showed different concentration factors. The 137 Cs content of some plants collected was not measurable due to a very low 137 Cs concentration level found in the upper layers of the incremental soils. Globally, the soil-to-plant transfer of 137 Cs can be described by a logarithmic normal distribution with a geometric mean of 0.3 and a geometric standard deviation of 3.9

Using SIM for strong end-to-end Application Authentication

OpenAIRE

Lunde, Lars; Wangensteen, Audun

2006-01-01

Today the Internet is mostly used for services that require low or none security. The commercial and governmental applications have started to emerge but met problems since they require strong authentication, which is both difficult and costly to realize. The SIM card used in mobile phones is a tamper resistant device that contains strong authentication mechanisms. It would be very convenient and cost-efficient if Internet services could use authentication methods based on the SIM. This mast...

Improving SysSim's Planetary Occurrence Rate Estimates

Science.gov (United States)

Ashby, Keir; Ragozzine, Darin; Hsu, Danley; Ford, Eric B.

2017-10-01

Kepler's catalog of thousands of transiting planet candidates enables statistical characterization of the underlying planet occurrence rates as a function of period and radius. Due to geometric factors and general noise in measurements, we know that many planets--especially those with a small-radius and/or long-period--were not observed by Kepler.To account for Kepler's detection criteria, Hsu et al. 2017 expanded on work in Lissuaer et al. 2011 to develop the Planetary System Simulator or "SysSim". SysSim uses a forward model to generate simulated catalogs of exoplanet systems, determine which of those simulated planets would have been seen by Kepler in the presence of uncertainties, and then compares those “observed planets” to those actually seen by Kepler. It then uses Approximate Bayesian Computation to infer the posterior probability distributions of the input parameters used to generate the forward model. In Hsu et al. 2017, we focused on matching the observed frequency of planets by solving for the underlying occurrence rate for each bin in a 2-dimensional grid of radius and period. After summarizing the results of Hsu et al. 2017, we show new results that investigate the effect on occurrence rates from including more accurate completeness products (from the Kepler DR25 analysis) into SysSim.

The combined measurement of uranium by alpha spectrometry and secondary ion mass spectrometry (SIMS)

International Nuclear Information System (INIS)

Harvan, D.

2009-01-01

The aim of thesis was to found the dependence between radiometric method - alpha spectrometry and surface sensitive method - Secondary Ion Mass Spectrometry (SIMS). Uranium or naturally occurring uranium isotopes were studied. Samples (high polished stainless steel discs) with uranium isotopes were prepared by electrodeposition. Samples were measured by alpha spectrometry after electrodeposition and treatment. It gives surface activities. Weights, as well as surface's weights of uranium isotopes were calculated from their activities, After alpha spectrometry samples were analyzed by TOF-SIMS IV instrument in International Laser Centre in Bratislava. By the SIMS analysis intensities of uranium-238 were obtained. The interpretation of SIMS intensities vs. surface activity, or surface's weights of uranium isotopes indicates the possibility to use SIMS in quantitative analysis of surface contamination by uranium isotopes, especially 238 U. (author)

Hydrogen peroxide stimulates cell motile activity through LPA receptor-3 in liver epithelial WB-F344 cells

Energy Technology Data Exchange (ETDEWEB)

Shibata, Ayano; Tanabe, Eriko; Inoue, Serina; Kitayoshi, Misaho; Okimoto, Souta; Hirane, Miku; Araki, Mutsumi [Division of Cancer Biology and Bioinformatics, Department of Life Science, Faculty of Science and Engineering, Kinki University, 3-4-1, Kowakae, Higashiosaka, Osaka 577-8502 (Japan); Fukushima, Nobuyuki [Division of Molecular Neurobiology, Department of Life Science, Faculty of Science and Engineering, Kinki University, 3-4-1, Kowakae, Higashiosaka, Osaka 577-8502 (Japan); Tsujiuchi, Toshifumi, E-mail: ttujiuch@life.kindai.ac.jp [Division of Cancer Biology and Bioinformatics, Department of Life Science, Faculty of Science and Engineering, Kinki University, 3-4-1, Kowakae, Higashiosaka, Osaka 577-8502 (Japan)

2013-04-12

Highlights: •Hydrogen peroxide stimulates cell motility of WB-F344 cells. •LPA{sub 3} is induced by hydrogen peroxide in WB-F344 cells. •Cell motility by hydrogen peroxide is inhibited in LPA{sub 3} knockdown cells. •LPA signaling is involved in cell migration by hydrogen peroxide. -- Abstract: Hydrogen peroxide which is one of reactive oxygen species (ROS) mediates a variety of biological responses, including cell proliferation and migration. In the present study, we investigated whether lysophosphatidic acid (LPA) signaling is involved in cell motile activity stimulated by hydrogen peroxide. The rat liver epithelial WB-F344 cells were treated with hydrogen peroxide at 0.1 or 1 μM for 48 h. In cell motility assays, hydrogen peroxide treated cells showed significantly high cell motile activity, compared with untreated cells. To measure the expression levels of LPA receptor genes, quantitative real time RT-PCR analysis was performed. The expressions of LPA receptor-3 (Lpar3) in hydrogen peroxide treated cells were significantly higher than those in control cells, but not Lpar1 and Lpar2 genes. Next, to assess the effect of LPA{sub 3} on cell motile activity, the Lpar3 knockdown cells from WB-F344 cells were also treated with hydrogen peroxide. The cell motile activity of the knockdown cells was not stimulated by hydrogen peroxide. Moreover, in liver cancer cells, hydrogen peroxide significantly activated cell motility of Lpar3-expressing cells, but not Lpar3-unexpressing cells. These results suggest that LPA signaling via LPA{sub 3} may be mainly involved in cell motile activity of WB-F344 cells stimulated by hydrogen peroxide.

Study and optimisation of SIMS performed with He+ and Ne+ bombardment

International Nuclear Information System (INIS)

Pillatsch, L.; Vanhove, N.; Dowsett, D.; Sijbrandij, S.; Notte, J.; Wirtz, T.

2013-01-01

The combination of the high-brightness He + /Ne + atomic level ion source with the detection capabilities of secondary ion mass spectrometry (SIMS) opens up the prospect of obtaining chemical information with high lateral resolution and high sensitivity on the Zeiss ORION helium ion microscope (HIM). A feasibility study with He + and Ne + ion bombardment is presented in order to determine the performance of SIMS analyses using the HIM. Therefore, the sputtering yields, useful yields and detection limits obtained for metallic (Al, Ni and W) as well as semiconductor samples (Si, Ge, GaAs and InP) were investigated. All the experiments were performed on a Cameca IMS4f SIMS instrument which was equipped with a caesium evaporator and oxygen flooding system. For most of the elements, useful yields in the range of 10 −4 to 3 × 10 −2 were measured with either O 2 or Cs flooding. SIMS experiments performed directly on the ORION with a prototype secondary ion extraction and detection system lead to results that are consistent with those obtained on the IMS4f. Taking into account the obtained useful yields and the analytical conditions, such as the ion current and typical dwell time on the ORION HIM, detection limits in the at% range and better can be obtained during SIMS imaging at 10 nm lateral resolution with Ne + bombardment and down to the ppm level when a lateral resolution of 100 nm is chosen. Performing SIMS on the HIM with a good detection limit while maintaining an excellent lateral resolution (<50 nm) is therefore very promising.

Time-of-flight SIMS/MSRI reflectron mass analyzer and method

Science.gov (United States)

Smentkowski, Vincent S.; Gruen, Dieter M.; Krauss, Alan R.; Schultz, J. Albert; Holecek, John C.

1999-12-28

A method and apparatus for analyzing the surface characteristics of a sample by Secondary Ion Mass Spectroscopy (SIMS) and Mass Spectroscopy of Recoiled Ions (MSRI) is provided. The method includes detecting back scattered primary ions, low energy ejected species, and high energy ejected species by ion beam surface analysis techniques comprising positioning a ToF SIMS/MSRI mass analyzer at a predetermined angle .theta., where .theta. is the angle between the horizontal axis of the mass analyzer and the undeflected primary ion beam line, and applying a specific voltage to the back ring of the analyzer. Preferably, .theta. is less than or equal to about 120.degree. and, more preferably, equal to 74.degree.. For positive ion analysis, the extractor, lens, and front ring of the reflectron are set at negative high voltages (-HV). The back ring of the reflectron is set at greater than about +700V for MSRI measurements and between the range of about +15 V and about +50V for SIMS measurements. The method further comprises inverting the polarity of the potentials applied to the extractor, lens, front ring, and back ring to obtain negative ion SIMS and/or MSRI data.

Challenges of biological sample preparation for SIMS imaging of elements and molecules at subcellular resolution

International Nuclear Information System (INIS)

Chandra, Subhash

2008-01-01

Secondary ion mass spectrometry (SIMS) based imaging techniques capable of subcellular resolution characterization of elements and molecules are becoming valuable tools in many areas of biology and medicine. Due to high vacuum requirements of SIMS, the live cells cannot be analyzed directly in the instrument. The sample preparation, therefore, plays a critical role in preserving the native chemical composition for SIMS analysis. This work focuses on the evaluation of frozen-hydrated and frozen freeze-dried sample preparations for SIMS studies of cultured cells with a CAMECA IMS-3f dynamic SIMS ion microscope instrument capable of producing SIMS images with a spatial resolution of 500 nm. The sandwich freeze-fracture method was used for fracturing the cells. The complimentary fracture planes in the plasma membrane were characterized by field-emission secondary electron microscopy (FESEM) in the frozen-hydrated state. The cells fractured at the dorsal surface were used for SIMS analysis. The frozen-hydrated SIMS analysis of individual cells under dynamic primary ion beam (O 2 + ) revealed local secondary ion signal enhancements correlated with the water image signals of 19 (H 3 O) + . A preferential removal of water from the frozen cell matrix in the Z-axis was also observed. These complications render the frozen-hydrated sample type less desirable for subcellular dynamic SIMS studies. The freeze-drying of frozen-hydrated cells, either inside the instrument or externally in a freeze-drier, allowed SIMS imaging of subcellular chemical composition. Morphological evaluations of fractured freeze-dried cells with SEM and confocal laser scanning microscopy (CLSM) revealed well-preserved mitochondria, Golgi apparatus, and stress fibers. SIMS analysis of fractured freeze-dried cells revealed well-preserved chemical composition of even the most highly diffusible ions like K + and Na + in physiologically relevant concentrations. The high K-low Na signature in individual cells

Challenges of biological sample preparation for SIMS imaging of elements and molecules at subcellular resolution

Science.gov (United States)

Chandra, Subhash

2008-12-01

Secondary ion mass spectrometry (SIMS) based imaging techniques capable of subcellular resolution characterization of elements and molecules are becoming valuable tools in many areas of biology and medicine. Due to high vacuum requirements of SIMS, the live cells cannot be analyzed directly in the instrument. The sample preparation, therefore, plays a critical role in preserving the native chemical composition for SIMS analysis. This work focuses on the evaluation of frozen-hydrated and frozen freeze-dried sample preparations for SIMS studies of cultured cells with a CAMECA IMS-3f dynamic SIMS ion microscope instrument capable of producing SIMS images with a spatial resolution of 500 nm. The sandwich freeze-fracture method was used for fracturing the cells. The complimentary fracture planes in the plasma membrane were characterized by field-emission secondary electron microscopy (FESEM) in the frozen-hydrated state. The cells fractured at the dorsal surface were used for SIMS analysis. The frozen-hydrated SIMS analysis of individual cells under dynamic primary ion beam (O 2+) revealed local secondary ion signal enhancements correlated with the water image signals of 19(H 3O) +. A preferential removal of water from the frozen cell matrix in the Z-axis was also observed. These complications render the frozen-hydrated sample type less desirable for subcellular dynamic SIMS studies. The freeze-drying of frozen-hydrated cells, either inside the instrument or externally in a freeze-drier, allowed SIMS imaging of subcellular chemical composition. Morphological evaluations of fractured freeze-dried cells with SEM and confocal laser scanning microscopy (CLSM) revealed well-preserved mitochondria, Golgi apparatus, and stress fibers. SIMS analysis of fractured freeze-dried cells revealed well-preserved chemical composition of even the most highly diffusible ions like K + and Na + in physiologically relevant concentrations. The high K-low Na signature in individual cells

Sorption and migration of 137Cs attached to organic materials of tea in silty clay soil

International Nuclear Information System (INIS)

Yuecel, H.; Oezmen, A.

1996-01-01

The effect of the organic material of tea on the adsorption behavior of 137 Cs on the silty clay soil has been examined by batch experiments, using 137 Cs extracted tea contaminated by the Chernobyl accident, with water. The variation of K d values was studied as a function of contact time and a volume-solid ratio (V/m). The equilibrium time of 137 Cs extracted from the tea is slower by 9 times than that of 137 Cs + ions for the silty clay soil. The V/m ratio did not affect the 137 Cs adsorption strongly. The sorption of 137 Cs extracted form the tea in terms of the distribution coefficient K d is higher (a factor of 2.5) than that of 137 Cs + ions. This result indicates that 137 Cs-complexes with organic materials of tea are much sorbed than 137 C + ions on the silty clay soil. The migration of 137 Cs extracted from the tea in the silty clay soil has been studied under a steady flow of tea-extract by using a soil zone apparatus. The 137 Cs concentrations contained in both effluent fractions and in soil samples were measured using a HPGe detector. The distribution patterns of 137 Cs in the layers of the soil zone were obtained as one- and two-dimensional. The migration of 137 Cs extracted from the tea in soil is mainly influenced by flow. The results indicate that the migration of 137 Cs-complexes with organic materials and 137 Cs adsorbed fine silts cannot be described by such a K d based on ion-exchange reactions, but it is important to consider the moving mechanism of particulates besides ion-exchange reactions. (Author)

Study on 137Cs adsorption by soils around Qingshan and Daya Bay Nuclear Power Plants

International Nuclear Information System (INIS)

Lu Zixian; Xu Shiming

1992-10-01

The patterns of 137 Cs adsorption and percolation are studied by 137 Cs solution through soil cylinder samples collected from seven sites around Qingshan and Daya Bay Nuclear Power Plant. The top soils (0 ∼ 20 cm) are put into plastic tubes after being sieved. Three different ways are taken in the experiments. (1) 137 Cs solutions with the same specific activity (3.7 x 10 4 Bq/L) and same volume (40 mL) pass through the soils. (2) 137 Cs solutions with different specific activity (3.7 x 10 3 , 3.7 x 10 4 , and 3.7 x 10 5 Bq/L) and with same volume (40 mL) pass through the soils. (3) 137 Cs solutions with same specific activity (3.7 x 10 4 Bq/L) and with different volumes (40, 80, 120 mL) pass through the soils. The results show that the relationships of specific activity on the top 1 cm soil to the specific activity of solution is conformed to y = Ax B , to the volume of solution is conformed to y = A + Bx. The upper 0 to 1 cm soil adsorbs 137 Cs over 90-95%, and upper 0-5 cm soil adsorbs 100% 137 Cs. When the depth is greater than 5 cm the activity of filtered solution is background. From this experiment, it shows that the contamination can be eliminated by removing top soil when the soil is contaminated by 13 '7Cs solution

Improved recovery of post-thaw motility and vitality of human spermatozoa cryopreserved in the presence of dithiothreitol.

Science.gov (United States)

Rao, B; David, G

1984-10-01

Semen was collected in the laboratory from nine healthy donors. The concentrations and the percentages of live and motile spermatozoa in all semen samples were within the normal range. Each sample was diluted with citrate-egg yolk-glycerol medium with and without 5 mM dithiothreitol (DTT). Samples were frozen in liquid nitrogen vapor (-70 degrees C) for 7 min and subsequently stored in liquid nitrogen. The effect of DTT in cryopreservation of sperm was determined by comparing percentage of motile and live spermatozoa between controls and DTT-treated post-thaw samples. Percentage of motile spermatozoa was determined by two techniques, laser Doppler velocimetry (LDV) and light microscopy. The percentage of live spermatozoa was measured by microscopic evaluation after staining with eosin-nigrosin. It was shown that the addition of DTT to the freezing medium significantly improved the recovery of motile and live spermatozoa in the post-thaw samples. The mean motility recovery, as measured by LDV, was 44.9% in the controls as compared to 73.9% in the DTT-treated samples. Similarly the mean recovery of live spermatozoa in the controls and DTT-treated samples was 66.5 and 86.6%, respectively. Based on these results, a new hypothesis implicating lipid peroxidation in cryoinjury is proposed. It is also suggested that the use of DTT in the freezing medium may offer an advantage over the commonly used techniques of human sperm cryopreservation.

Performance of BICM-based QAM-SIM OWC over gamma-gamma turbulence channels

KAUST Repository

Malik, Muhammad Talha

2015-05-01

We derive a series expression for the pair-wise error probability (PEP) of bit interleaved coded modulation (BICM)-based subcarrier intensity modulation (SIM) optical wireless communication (OWC) system employing M^{2}-ary quadrature amplitude modulation ( M^{2} -QAM) over the Gamma-Gamma turbulence channels. Using this expression, we develop an upper bound (UB) to predict the bit-error rate performance of such system. Simulation results are presented to verify the analytical results. We also develop an asymptotic UB which reveals that the diversity order depends on the smaller channel parameter and the free distance of the convolutional code. © 1997-2012 IEEE.

Cyto-Sim: a formal language model and stochastic simulator of membrane-enclosed biochemical processes.

Science.gov (United States)

Sedwards, Sean; Mazza, Tommaso

2007-10-15

Compartments and membranes are the basis of cell topology and more than 30% of the human genome codes for membrane proteins. While it is possible to represent compartments and membrane proteins in a nominal way with many mathematical formalisms used in systems biology, few, if any, explicitly model the topology of the membranes themselves. Discrete stochastic simulation potentially offers the most accurate representation of cell dynamics. Since the details of every molecular interaction in a pathway are often not known, the relationship between chemical species in not necessarily best described at the lowest level, i.e. by mass action. Simulation is a form of computer-aided analysis, relying on human interpretation to derive meaning. To improve efficiency and gain meaning in an automatic way, it is necessary to have a formalism based on a model which has decidable properties. We present Cyto-Sim, a stochastic simulator of membrane-enclosed hierarchies of biochemical processes, where the membranes comprise an inner, outer and integral layer. The underlying model is based on formal language theory and has been shown to have decidable properties (Cavaliere and Sedwards, 2006), allowing formal analysis in addition to simulation. The simulator provides variable levels of abstraction via arbitrary chemical kinetics which link to ordinary differential equations. In addition to its compact native syntax, Cyto-Sim currently supports models described as Petri nets, can import all versions of SBML and can export SBML and MATLAB m-files. Cyto-Sim is available free, either as an applet or a stand-alone Java program via the web page (http://www.cosbi.eu/Rpty_Soft_CytoSim.php). Other versions can be made available upon request.

137 Caesium distribution in the eastern Mediterranean Sea. Recent changes and future trends

International Nuclear Information System (INIS)

Papucci, C.; Delfanti, R.

1999-01-01

A series of sampling campaigns were carried out in the eastern Mediterranean in the period 1995-1997, to examine the relationship between the distribution of 137Cs in the water column and water mass circulation. 137Cs concentration in the surface water ranges between 3.3 and 4.0 mBq/l all over the area, indicating that the input due to the Chernobyl accident has been transferred to deep water layers by convection processes. In fact, in the vertical profiles, relative maxima are observed in the intermediate (4 mBq/l) and deep waters (∼2.5 mBq/l) formed after the Chernobyl accident. A clear Chernobyl signal also traces the new deep waters formed in the Aegean Sea that, exiting from the Cretan Arc Straits, since 1991 are spreading in the bottom layer of the eastern Mediterranean. The changes in 137Cs vertical profiles related to the new thermohaline circulation of the intermediate and deep waters of the eastern Mediterranean are being monitored at a deep station in the western Ionian Sea. The 1997 profile shows a decrease in 137Cs concentration both in the Levantine intermediate water and in the eastern Mediterranean deep water with respect to 1996. The decrease in Levantine intermediate water is likely due to seasonal/interannual variability, while the changes in the deep layer are related to the spreading westward into the Ionian of the new Aegean dense water. Along the path towards the western Mediterranean, 137Cs content in the Levantine intermediate water decreases from ∼4 mBq/l in the W-Ionian Sea to ∼2 mBq/l at the western sill of the Sicily Straits, due to mixing with underlying water, with lower caesium content, near the Malta Sill. Time-series measurements at the western sill of the Sicily Straits show that, while 137Cs concentration in the surface water entering the eastern Mediterranean remained constant (∼3.5 mBq/l) in the period 1993-1997, its level in the Levantine intermediate water leaving the basin decreased from 3.5 to 2.0 mBq/l

Improvement of 137Cs analysis in small volume seawater samples using the Ogoya underground facility

International Nuclear Information System (INIS)

Hirose, K.; Komura, K.; Kanazawa University, Ishikawa; Aoyama, M.; Igarashi, Y.

2008-01-01

137 Cs in seawater is one of the most powerful tracers of water motion. Large volumes of samples have been required for determination of 137 Cs in seawater. This paper describes improvement of separation and purification processes of 137 Cs in seawater, which includes purification of 137 Cs using hexachloroplatinic acid in addition to ammonium phosphomolybdate (AMP) precipitation. As a result, we succeeded the 137 Cs determination in seawater with a smaller sample volume of 10 liter by using ultra-low background gamma-spectrometry in the Ogoya underground facility. 137 Cs detection limit was about 0.1 mBq (counting time: 10 6 s). This method is applied to determine 137 Cs in small samples of the South Pacific deep waters. (author)

Post-depositional redistribution and gradual accumulation of 137Cs in a riparian wetland ecosystem in Sweden

International Nuclear Information System (INIS)

Stark, K.; Wallberg, P.; Nylen, T.

2006-01-01

After the Chernobyl accident, high activity concentrations of 137 Cs (>1 MBq m -2 ) were detected in a riparian swamp in the central-eastern part of Sweden. The objective of this study was to clarify the redistribution processes behind the accumulation of 137 Cs in the wetland. A mass balance budget of 137 Cs was calculated based on soil and sediment samples and reports in the literature. Results showed that accumulation occurred over several years. Of all the 137 Cs activity discharged between 1986 and 2002 from the upstream lake, 29% was estimated to be retained in the wetland. In 2003, measurements showed that 17 kBq m -2 sedimented on the stream banks of the wetland. Continuing overbank sedimentation by spring flooding prolongs the time that the wetland will contain high activity concentrations of 137 Cs. Consequently, organisms living in wetlands serving as sinks for 137 Cs may become exposed over long time periods to high activity concentrations

Vertical distribution and inventories of 137Cs in the Syrian soils of the eastern Mediterranean region

International Nuclear Information System (INIS)

Al-Masri, M.S.

2006-01-01

Vertical distribution and inventories of 137 Cs have been determined using radiocesium distributions in presumably undistributed soil profiles, collected from 36 sites distributed all over Syria (eastern Mediterranean region). Vertical distributions of 137 Cs in the collected profiles were found to be strongly correlated with soil type and five groups were identified. Based on these profiles, total 137 Cs inventory (bomb test and Chernobyl) varied between 320 Bq m -2 and 9647 Bq m -2 . Geographical mapping of 137 Cs inventories showed that the highest values were found in the coastal, middle and north-east regions of Syria indicating that Chernobyl atmospheric contribution to the total 137 Cs deposition in the region is predominant. In contrast, the lowest values were found in the south-east region (Syrian Badia), where a relatively uniform distribution was observed, which may only be attributed to the past global nuclear bomb test. The measured inventories were also compared with a mathematical model for estimating bomb derived 137 Cs reference inventories

Did J. Marion Sims deliberately addict his first fistula patients to opium?

Science.gov (United States)

Wall, L Lewis

2007-07-01

American surgeon J. Marion Sims (1813-83) is regarded by many modern authors as a controversial figure because he carried out a series of experimental surgeries on enslaved African American women between 1846 and 1849 in an attempt to cure them of vesicovaginal fistulas, which they had all developed as a result of prolonged obstructed labor. He operated on one woman, Anarcha Westcott, thirty times before he successfully closed her fistula. Sims performed these fistula repair operations without benefit of anesthesia but gave these women substantial doses of opium afterwards. Several modern writers have alleged that Sims did this in order to addict them to the drug and thereby to enhance his control over them. This article examines the controversy surrounding Sims' use of postoperative opium in these enslaved surgical patients. The evidence suggests that although these women were probably tolerant to the doses of opium that he used, there is no evidence that he deliberately tried to addict them to this drug. Sims' use of postoperative opium appears to have been well supported by the therapeutic practices of his day, and the regimen that he used was enthusiastically supported by many contemporary surgeons.

Aging and intestinal motility: a review of factors that affect intestinal motility in the aged.

LENUS (Irish Health Repository)

O'Mahony, Denis

2012-02-03

Normal aging is associated with significant changes in the function of most organs and tissues. In this regard, the gastrointestinal tract is no exception. The purpose of this review is to detail the important age-related changes in motor function of the various parts of the gastrointestinal tract and to highlight some of the important motility changes that may occur, either in relation to common age-related disorders, or as a result of certain drugs commonly prescribed in the aged. A major confounding factor in the interpretation of motor phenomena throughout the gastrointestinal tract in this age group is the frequent coexistence of neurological, endocrinological and other disease states, which may be independently associated with dysmotility. Overall, current data are insufficient to implicate normal aging as a cause of dysmotility in the elderly. Normal aging is associated with various changes in gastrointestinal motility, but the clinical significance of such changes remains unclear. More important is the impact of various age-related diseases on gastrointestinal motility in the elderly: for example, long-standing diabetes mellitus may reduce gastric emptying in up to 50% of patients; depression significantly prolongs whole-gut transit time; hypothyroidism may prolong oro-caecal transit time; and chronic renal failure is associated with impaired gastric emptying. In addition, various, frequently used drugs in the elderly cause disordered gastrointestinal motility. These drugs include anticholinergics, especially antidepressants with an anticholinergic effect, opioid analgesics and calcium antagonists.

An investigation on the mechanism of sublimed DHB matrix on molecular ion yields in SIMS imaging of brain tissue.

Science.gov (United States)

Dowlatshahi Pour, Masoumeh; Malmberg, Per; Ewing, Andrew

2016-05-01

We have characterized the use of sublimation to deposit matrix-assisted laser desorption/ionization (MALDI) matrices in secondary ion mass spectrometry (SIMS) analysis, i.e. matrix-enhanced SIMS (ME-SIMS), a common surface modification method to enhance sensitivity for larger molecules and to increase the production of intact molecular ions. We use sublimation to apply a thin layer of a conventional MALDI matrix, 2,5-dihydroxybenzoic acid (DHB), onto rat brain cerebellum tissue to show how this technique can be used to enhance molecular yields in SIMS while still retaining a lateral resolution around 2 μm and also to investigate the mechanism of this enhancement. The results here illustrate that cholesterol, which is a dominant lipid species in the brain, is decreased on the tissue surface after deposition of matrix, particularly in white matter. The decrease of cholesterol is followed by an increased ion yield of several other lipid species. Depth profiling of the sublimed rat brain reveals that the lipid species are de facto extracted by the DHB matrix and concentrated in the top most layers of the sublimed matrix. This extraction/concentration of lipids directly leads to an increase of higher mass lipid ion yield. It is also possible that the decrease of cholesterol decreases the potential suppression of ion yield caused by cholesterol migration to the tissue surface. This result provides us with significant insights into the possible mechanisms involved when using sublimation to deposit this matrix in ME-SIMS.

Transfer of 137Cs to cow's milk: investigations on dairy farms in Sweden

International Nuclear Information System (INIS)

Karlen, G.; Johanson, K.J.; Bertilsson, J.

1995-01-01

Since 1986, the year of the nuclear accident at Chernobyl, 137 Cs activity concentrations in cow's milk on dairy farms were studied in Sweden. Transfer coefficients, F m , of 137 Cs from pasture and fodder to cow's milk were determined on farms in the counties of Uppsala, Gaevleborg and Vaestmanland in central Sweden for one month on winter-fodder, and for the first month in 1987 and 1988 on pasture. The average F m for all investigations (of 10 farms on winter-fodder and 11 farms on pasture in 1987 and 4 farms on pasture in 1988) south of Gaevle was estimated to be 0.0055 with a range of 0.0039 to 0.0080. The 137 Cs activity concentration in milk decreased with time. In summer 1992 and 1993, 137 Cs in milk, on the farms still producing milk, was determined. On these farms, 137 Cs activity concentration in milk was found to be -1 . The effective ecological half-life from 1987 was estimated to be 1.4 ± 0.5(sd) years for milk from 10 farms with a range of 0.8-2.0 years. One farm where 137 Cs milk decreased at a slower rate, or not at all, used semi-natural and uncultivated pasture, forest meadows. On intensely managed farms, where potassium fertilizer was distributed, ploughing was performed and, in 1986, forage was cut at a higher stubble-height, the decrease of 137 Cs in milk was observed to be faster. (Author)

137Cs and 239+240Pu levels in the Asia-Pacific regional seas

International Nuclear Information System (INIS)

Duran, E.B.; Povinec, P.P.; Fowler, S.W.; Airey, P.L.; Hong, G.H.

2004-01-01

137 Cs and 239+240 Pu data in seawater, sediment and biota from the regional seas of Asia-Pacific extending from 50 deg. N to 60 deg. S latitude and 60 deg. E to 180 deg. E longitude based on the Asia-Pacific Marine Radioactivity Database (ASPAMARD) are presented and discussed. 137 Cs levels in surface seawater have been declining to its present median value of about 3 Bq/m 3 due mainly to radioactive decay, transport processes, and the absence of new significant inputs. 239+240 Pu levels in surface seawater are much lower, with a median of about 6 mBq/m 3 . 239+240 Pu appears to be partly scavenged by particles and is therefore more readily transported down the water column. As with seawater, 239+240 Pu concentrations are lower than 137 Cs in surface sediment. The median 137 Cs concentration in surface sediment is 1.4 Bq/kg dry, while that of 239+240 Pu is only 0.2 Bq/kg dry. The vertical profiles of both 137 Cs and 239+240 Pu in the sediment column of coastal areas are different from deep seas which can be attributed to the higher sedimentation rates and additional contribution of run-offs from terrestrial catchment areas in the coastal zone. Comparable data for biota are far less extensive than those for seawater and sediment. The median 137 Cs concentration in fish (0.2 Bq/kg wet) is higher than in crustaceans (0.1 Bq/kg wet) or mollusks (0.1 Bq/kg wet). Benchmark values (as of 2001) for 137 Cs and 239+240 Pu concentrations in seawater, sediment and biota are established to serve as reference values against which the impact of future anthropogenic inputs can be assessed. ASPAMARD represents one of the most comprehensive compilations of available data on 137 Cs and 239+240 Pu in particular, and other anthropogenic as well as natural radionuclides in seawater, sediment and biota from the Asia-Pacific regional seas

Airborne fallout mapping of {sup 137}Cs - STUK/HUT team

Energy Technology Data Exchange (ETDEWEB)

Nikkinen, M.; Aarnio, P. [Helsinki Univ. of Technology, Espoo (Finland); Honkamaa, T.; Tiilikainen, H. [Finnish Centre for Radiation and Nuclear Safety, Helsinki (Finland)

1997-12-31

The task of the team was to create a fallout map of {sup 137}Cs on a specified area in Padasjoki Auttoinen village. The team used AB-420 helicopter of the Finnish Frontier Guard. The team had two measuring systems: HPGe system (relative efficiency 18%) and NaI system (5`x5`). Both systems produced similar maps. The average {sup 137}Cs fallout within the area (lakes and ponds included) was 88 kBq m{sup -2,} the maximum value being 161 kBq m{sup -2}. In an emergency the HPGe is superior to NaI because of its better energy resolution, giving possibility to obtain nuclide-specific results. (au).

Airborne fallout mapping of {sup 137}Cs - STUK/HUT team

Energy Technology Data Exchange (ETDEWEB)

Nikkinen, M; Aarnio, P [Helsinki Univ. of Technology, Espoo (Finland); Honkamaa, T; Tiilikainen, H [Finnish Centre for Radiation and Nuclear Safety, Helsinki (Finland)

1998-12-31

The task of the team was to create a fallout map of {sup 137}Cs on a specified area in Padasjoki Auttoinen village. The team used AB-420 helicopter of the Finnish Frontier Guard. The team had two measuring systems: HPGe system (relative efficiency 18%) and NaI system (5`x5`). Both systems produced similar maps. The average {sup 137}Cs fallout within the area (lakes and ponds included) was 88 kBq m{sup -2,} the maximum value being 161 kBq m{sup -2}. In an emergency the HPGe is superior to NaI because of its better energy resolution, giving possibility to obtain nuclide-specific results. (au).

Small intestinal motility

NARCIS (Netherlands)

Smout, André J. P. M.

2004-01-01

PURPOSE OF REVIEW: In the past year, many studies were published in which new and relevant information on small intestinal motility in humans and laboratory animals was obtained. RECENT FINDINGS: Although the reported findings are heterogeneous, some themes appear to be particularly interesting and

The effect of loss of O-antigen ligase on phagocytic susceptibility of motile and non-motile Pseudomonas aeruginosa.

Science.gov (United States)

Demirdjian, Sally; Schutz, Kristin; Wargo, Matthew J; Lam, Joseph S; Berwin, Brent

2017-12-01

The bacterial pathogen Pseudomonas aeruginosa undergoes adaptation and selection over the course of chronic respiratory tract infections which results in repeatedly-observed phenotypic changes that are proposed to enable its persistence. Two of the clinically significant P. aeruginosa phenotypic changes are loss of flagellar motility and modifications to LPS structure, including loss of O-antigen expression. The effect of loss of O-antigen, frequently described as conversion from smooth to rough LPS, and the combined effect of loss of motility and O-antigen on phagocytic susceptibility by immune cells remain unknown. To address this, we generated genetic deletion mutants of waaL, which encodes the O-antigen ligase responsible for linking O-antigen to lipid A-core oligosaccharide, in both motile and non-motile P. aeruginosa strains. With the use of these bacterial strains we provide the first demonstration that, despite a progressive selection for P. aeruginosa with rough LPS during chronic pulmonary infections, loss of the LPS O-antigen does not confer phagocytic resistance in vitro. However, use of the waaLmotABmotCD mutant revealed that loss of motility confers resistance to phagocytosis regardless of the smooth or rough LPS phenotype. These findings reveal how the O-antigen of P. aeruginosa can influence bacterial clearance during infection and expand our current knowledge about the impact of bacterial phenotypic changes during chronic infection. Copyright © 2017 Elsevier Ltd. All rights reserved.

Use of experimental plots for assessing Chernobyl-derived fallout of 137CS in France

International Nuclear Information System (INIS)

Bonte, Ph.; Sogon, S.; Bourgeois, S.; Terce, M.; Morel, Ch.

2004-01-01

Caesium-137 ( 137 Cs) is widely used for the determination of soil erosion and sedimentation rates. However, in Europe, if the additional inputs of 137 Cs fallout associated with the Chernobyl accident have given a supplementary mark to know the chronological history of buried sediments in rivers or wetlands, they have considerably complicated the interpretation of 137 Cs inventories used for estimating soil redistribution on slopes. In fact, determination of Chernobyl-derived fallout 137 Cs is problematic because very few sites have been correctly sampled at the moment of the accident. During the ten years after, it was possible to estimate the fallout measuring the 134 Cs activity for estimating 137 Cs ( 137 Cs / 134 Cs 2.0 at the time of the accident). But these measurements are extremely rare, whereas it should be the more accurate method to resolve this question. The more used solution is to use model based on atmospheric circulation and rain precipitation, the main part of fallout been due to atmospheric washing by the rain. Other solution is to compare 137 Cs specific activity of soil samples collected after the accident and older samples. Then, we choose a set of soil samples collected on several experimental plots at different places in France, and sampled before and after the Chernobyl accident, to determine the part of contamination linked to this 137 Cs fallout event with a simple comparison of their 137 Cs specific activity. In fact, national French institutes working on agronomy maintain experimental plots, with varied surface area (1 m 2 10 m 2 or larger), for monitoring of soil physics and chemistry evolution. Nine sites were studied: two of them close to Paris, one 100 km east of Paris, 3 in Loire basin and 3 in south west, in the Pyrenees Atlantic. These measurements confirm the influence of the Chernobyl radioactive plume over the Paris Basin concerning the 137 Cs fallout. The 137 Cs specific activity is, on average, 25% (from 18 to 35% at

Towards a SIM-Less Existence: The Evolution of Smart Learning Networks

Science.gov (United States)

Al-Khouri, Ali M.

2015-01-01

This article proposes that the widespread availability of wireless networks creates a case in which there is no real need for SIM cards. Recent technological developments offer the capability to outperform SIM cards and provide more innovative dimensions to current systems of mobility. In this context of changing realities in the domain of…

SIMS and TEM study on oxide characteristics of Zircaloy

International Nuclear Information System (INIS)

Jung, Y. H.; Baek, J. H.; Kim, S. J.; Kim, K. H.; Choi, B. K.; Jung, Y. H.

1998-01-01

Long-term corrosion test, SIMS analysis, and TEM study were carried out to investigate the corrosion characteristics and corrosion mechanism of Zircaloy-4 in LiOH solution. The corrosion tests were performed in alkali solutions at 350 deg C for 500days. SIMS analysis was performed for the specimens prepared to have an equal oxide thickness to measure the cation content. TEM studies on the samples formed in various alkali solutions were also conducted. Based on the corrosion test, SIMS analysis, and TEM study, the cation is considered to control the corrosion in LiOH solution and its effect is dependent on the concentration of alkali and the oxide thickness. The slight acceleration of corrosion rate at a low concentration is thought to be caused by the cation incorporation into oxide while the significant acceleration at a high concentration is due to the transformation of oxide microstructure that would be induced by the cation incorporation

TOF-SIMS characterization of planktonic foraminifera

International Nuclear Information System (INIS)

Vering, G.; Crone, C.; Bijma, J.; Arlinghaus, H.F.

2003-01-01

Oceanic sediment properties that are closely related to former environmental (e.g. climatic) parameters are called 'proxies'. Planktonic foraminifera are small protists which make up part of the plankton. Certain element concentrations, element ratios and isotopic ratios of their calcite shell found in the sediment can be used as proxies reflecting the state of the ocean during the life of the animal; they supply useful information for the reconstruction of environmental parameters. Time-of-flight secondary ion mass spectrometry (TOF-SIMS) was used to examine the inner and outer part of foraminiferal shells, as well as foraminiferal shells dissolved in HCl. High resolution elemental images and mass spectra were obtained from the foraminifera. The data show that TOF-SIMS is a useful technique for determining the elemental distribution and for measuring isotope ratios such as δ 11 B with high precision in a single foraminiferal shell

TOF-SIMS characterization of planktonic foraminifera

Energy Technology Data Exchange (ETDEWEB)

Vering, G.; Crone, C.; Bijma, J.; Arlinghaus, H.F

2003-01-15

Oceanic sediment properties that are closely related to former environmental (e.g. climatic) parameters are called 'proxies'. Planktonic foraminifera are small protists which make up part of the plankton. Certain element concentrations, element ratios and isotopic ratios of their calcite shell found in the sediment can be used as proxies reflecting the state of the ocean during the life of the animal; they supply useful information for the reconstruction of environmental parameters. Time-of-flight secondary ion mass spectrometry (TOF-SIMS) was used to examine the inner and outer part of foraminiferal shells, as well as foraminiferal shells dissolved in HCl. High resolution elemental images and mass spectra were obtained from the foraminifera. The data show that TOF-SIMS is a useful technique for determining the elemental distribution and for measuring isotope ratios such as {delta}{sup 11}B with high precision in a single foraminiferal shell.

Elevated congenital anomaly rates and incorporated cesium-137 in the Polissia region of Ukraine.

Science.gov (United States)

Wertelecki, Wladimir; Koerblein, Alfred; Ievtushok, Bogdana; Zymak-Zakutnia, Nataliya; Komov, Oleksandr; Kuznietsov, Illia; Lapchenko, Serhiy; Sosyniuk, Zoriana

2016-03-01

Investigations soon after the 1986 Chornobyl (Chernobyl in Russian) accident of exposed populations residing elsewhere in Europe led government and international agencies to conclude that exposures to cesium-137 (Cs-137) were not teratogenic. Our observations of elevated population rates of neural tube defects (NTDs) and microcephaly and microphthalmia (M/M) in the Rivne Province in Ukraine, which were among the highest in Europe, prompted this follow-up investigation inclusive of whole-body counts (WBCs) of Cs-137 among ambulatory patients and pregnant women residing in Polissia, the most polluted region in Rivne. Yearly (2000-2012) population rates of NTDs and M/M and WBC patterns of ambulatory patients (2001-2010) and pregnant women (2011-2013) in Polissia and non-Polissia regions of Rivne were analyzed. The NTD and M/M population rates in Rivne remain elevated and are statistically significantly higher in Polissia than in non-Polissia. The WBCs among residents in Polissia are statistically significantly higher than among those from non-Polissia. NTD and M/M rates are highest in the Polissia region of Rivne and are among the highest in Europe. In Polissia, the WBCs of Cs-137 are above officially set permissible upper limits. The results are based on aggregate data of NTDs and M/Ms and average WBC values. Further investigations of causality of the high rates of NTDs and M/Ms are needed and urgent strengthening policies and implementations to reduce exposures to teratogens, in particular radioactive nuclides and alcohol, and consumption of folic acid supplements are indicated. © 2016 Wiley Periodicals, Inc.

Atmospheric deposition of 137Cs between 1994 and 2002 at Cienfuegos, Cuba

International Nuclear Information System (INIS)

Alonso-Hernandez, C.M.; Cartas-Aguila, H.; Diaz-Asencio, M.; Munoz-Caravaca, A.; Martin-Perez, J.; Sibello-Hernandez, R.

2006-01-01

Levels of 137 Cs in total atmospheric deposition have been measured in the Cienfuegos region (Cuba) between 1994 and 2002. Samples were collected every three months, evaporated to dryness to obtain residual samples, and measured by gamma spectrometry. The 137 Cs mean concentration in total deposition was 0.24 Bq m -2 and data ranged between -2 . Precipitation rates and raintime have proved to be the most important factors controlling the concentration and depositional flux of 137 Cs in the atmosphere over Cienfuegos, showing a high correlation coefficient (R = 0.93)

CystiSim - an agent-based model for Taenia solium transmission and control

DEFF Research Database (Denmark)

Braae, Uffe Christian; Devleesschauwer, Brecht; Gabriël, Sarah

2016-01-01

Taenia solium taeniosis/cysticercosis was declared eradicable by the International Task Force for Disease Eradication in 1993, but remains a neglected zoonosis. To assist in the attempt to regionally eliminate this parasite, we developed cystiSim, an agent-based model for T. solium transmission...... interventions in both hosts, mass drug administration to humans, and vaccination and treatment of pigs, have a high probability of success if coverage of 75% can be maintained over at least a four year period. In comparison with an existing mathematical model for T. solium transmission, cystiSim also includes...... and control. The model was developed in R and available as an R package (http://cran.r-project.org/package=cystiSim). cystiSim was adapted to an observed setting using field data from Tanzania, but adaptable to other settings if necessary. The model description adheres to the Overview, Design concepts...

Quantitative SIMS Imaging of Agar-Based Microbial Communities.

Science.gov (United States)

Dunham, Sage J B; Ellis, Joseph F; Baig, Nameera F; Morales-Soto, Nydia; Cao, Tianyuan; Shrout, Joshua D; Bohn, Paul W; Sweedler, Jonathan V

2018-05-01

After several decades of widespread use for mapping elemental ions and small molecular fragments in surface science, secondary ion mass spectrometry (SIMS) has emerged as a powerful analytical tool for molecular imaging in biology. Biomolecular SIMS imaging has primarily been used as a qualitative technique; although the distribution of a single analyte can be accurately determined, it is difficult to map the absolute quantity of a compound or even to compare the relative abundance of one molecular species to that of another. We describe a method for quantitative SIMS imaging of small molecules in agar-based microbial communities. The microbes are cultivated on a thin film of agar, dried under nitrogen, and imaged directly with SIMS. By use of optical microscopy, we show that the area of the agar is reduced by 26 ± 2% (standard deviation) during dehydration, but the overall biofilm morphology and analyte distribution are largely retained. We detail a quantitative imaging methodology, in which the ion intensity of each analyte is (1) normalized to an external quadratic regression curve, (2) corrected for isomeric interference, and (3) filtered for sample-specific noise and lower and upper limits of quantitation. The end result is a two-dimensional surface density image for each analyte. The sample preparation and quantitation methods are validated by quantitatively imaging four alkyl-quinolone and alkyl-quinoline N-oxide signaling molecules (including Pseudomonas quinolone signal) in Pseudomonas aeruginosa colony biofilms. We show that the relative surface densities of the target biomolecules are substantially different from values inferred through direct intensity comparison and that the developed methodologies can be used to quantitatively compare as many ions as there are available standards.

Transfer of 137Cs to wild vegetables

International Nuclear Information System (INIS)

Ito, Nobuhiko; Natsuhori, Masahiro; Mezawa, Akane; Kawakami, Akira

1998-01-01

For the evaluation of internal radiation dose, it is needed to estimate the amount of radionuclide incorporated to human body using a simulation model. 137 Cesium (Cs) is easily transferred associating with food intake as well as potassium and so, Cs is an important nuclide for evaluation of internal radiation. 137 Cs concentrations in wild vegetables are higher than those of cultured vegetables and milk. Therefore, the transfer coefficients of 137 Cs from soil to wild vegetables were estimated in this study. Wild vegetables and soils of their farms were collected in the Hakkoda Mountain range of Aomori Prefecture. The levels of 137 Cs in wild vegetables were 0.42-18.35 (Bq/kg), whereas those in cabbage and spinach were 0.08 and 0.01 (Bq/kg), respectively, indicating that the Cs level is dozens to several hundreds times higher in wild vegetables than cultured ones. And the transfer coefficient was estimated as 0.003-0.94 for the former and 0.001-0.8 for the latter. On the other hand, 1 37 Cs levels of the soils on which wild vegetables grew was 28.0 Bq/kg and it was 3.9 Bq/kg for the farm soil. Furthermore, the effects of water content and pH of the soil on the transfer coefficient were studied. (M.N.)

Hydraulic Arm Modeling via Matlab SimHydraulics

Czech Academy of Sciences Publication Activity Database

Věchet, Stanislav; Krejsa, Jiří

2009-01-01

Roč. 16, č. 4 (2009), s. 287-296 ISSN 1802-1484 Institutional research plan: CEZ:AV0Z20760514 Keywords : simulatin modeling * hydraulics * SimHydraulics Subject RIV: JD - Computer Applications, Robotics

SIMS analysis: Development and evaluation 1995 summary report

International Nuclear Information System (INIS)

Groenewold, G.S.; Appelhans, A.D.; Ingram, J.C.; Delmore, J.E.; Dahl, D.A.

1995-10-01

Secondary ion mass spectrometry (SIMS) was evaluated for characterizing Hg salts. It was found that sulfate and chloride species could be identified directly without sample preparation. Mercuric oxide could be identified by complexation with formic acid. Hg nitrates could be identified by complexation with cyclohexylamine (CHA). Laser desorption ion trap MS was evaluated for characterizing EDTA on environmental samples. No intact EDTA ions were observed, but a series of EDTA fragment ions were visible, particularly on basalt and soil. An ion trap SIMS was developed: a perrhenate ion gun was interfaced to a Teledyne ion trap spectrometer, and the entire device was mounted on a cart. The technology was demonstrated using a prototype ion trap SIMS instrument for detecting Hg·CHA complexes formed from nitrate salts. Intensity of the ion gun was improved, and the surface damage of the particle was small, and ion gun technology transfer to Phi-Evans, Inc. is being considered. Two technology end users are at INEL's Central Facilities Area 674 pond and acid pit of the Radioactive Waste Management Complex; target problem at both sites is the need for Hg speciation on soil samples

A Sim(2 invariant dimensional regularization

Directory of Open Access Journals (Sweden)

J. Alfaro

2017-09-01

Full Text Available We introduce a Sim(2 invariant dimensional regularization of loop integrals. Then we can compute the one loop quantum corrections to the photon self energy, electron self energy and vertex in the Electrodynamics sector of the Very Special Relativity Standard Model (VSRSM.

Caesium-137 root uptake by agricultural and wild crops in post-Chernobyl landscape: the possibilities for phytoremediation?

Science.gov (United States)

Paramonova, Tatiana; Shamshurina, Eugenia; Komissarova, Olga; Belyaev, Vladimir

2015-04-01

In spite of long term period after Chernobyl fallout (≈25 years after the accident) the level of Cs-137 in soils of contaminated landscapes remains several times more than radiation safety standard (= 37 kBq/m2). In particular, within the area of Plavsk radioactive hot spot (Tula region, Russia) current Cs-137 activities in soil are 460-500 Bq/kg (170-200 kBq/m2) on watershed, 580-680 Bq/kg (200-220 kBq/m2) in arable lower parts of slopes and 620-710 Bq/kg (210-280 kBq/m2) in untilled foots of slopes and river floodplains. To estimate the process of Cs-137 root uptake and incorporation of the radionuclide in plant tissues 6 agricultural crops of typical field rotation (spring barley, maize, summer rape, galega, potatoes, amaranth) as well as natural ecosystems of dry and wet meadows were selected for the detailed study. Total bioproductivity of agricultural crops varies between 1.7-3.9 kg/m2, natural grass ecosystems - 1.9-2.2 g/m2, and is obviously unaffected by radioactive land contamination. At the same time Cs-137 activity in total biomass slightly increases with Cs-137 activity in soil (correlation coefficient r=0.45) and with total biomass (correlation coefficient r=0.51) in the row: rape (5 Bq/kg) cereals that are true accumulators of Cs-137 seem to be useless for phytoremediation purposes, as 86-97% of the radionuclide inventory is associated with roots and remains in soil after cutting of aboveground parts. On the other hand, galega and amaranth could be considered as agricultural crops potentially being used for phytoremediation, since 87-93% of Cs-137 inventory is located in shoots. Potatoes having rather high aboveground biomass and easily removed from soil underground part could be also used for phytoremediation. However, it should be clearly understood that in total Cs-137 inventory in "soil-plant" system the annual amount of the radionuclide's consumption (that may be alienated when harvesting) is less than 0.01%, while the rate of Cs-137

Sperm motility and morphology as changing parameters linked to sperm count variations.

OpenAIRE

Dua A; Vaidya S

1996-01-01

Variations in semen analyses of 177 males over a 1 year period were assessed. The average means of total counts, motility, morphology, total motile count and non-motile % were determined for 5 classes of patients ranging from azoospermic to normospermic. Positive relationships between a falling sperm count, a decrease in motility and total motile counts were seen. Also, increasingly, abnormal forms were found with lower sperm counts.

TOF-SIMS Analysis of Red Color Inks of Writing and Printing Tools on Questioned Documents.

Science.gov (United States)

Lee, Jihye; Nam, Yun Sik; Min, Jisook; Lee, Kang-Bong; Lee, Yeonhee

2016-05-01

Time-of-flight secondary ion mass spectrometry (TOF-SIMS) is a well-established surface technique that provides both elemental and molecular information from several monolayers of a sample surface while also allowing depth profiling or image mapping to be performed. Static TOF-SIMS with improved performances has expanded the application of TOF-SIMS to the study of a variety of organic, polymeric, biological, archaeological, and forensic materials. In forensic investigation, the use of a minimal sample for the analysis is preferable. Although the TOF-SIMS technique is destructive, the probing beams have microsized diameters so that only small portion of the questioned sample is necessary for the analysis, leaving the rest available for other analyses. In this study, TOF-SIMS and attenuated total reflectance Fourier transform infrared (ATR-FTIR) were applied to the analysis of several different pen inks, red sealing inks, and printed patterns on paper. The overlapping areas of ballpoint pen writing, red seal stamping, and laser printing in a document were investigated to identify the sequence of recording. The sequence relations for various cases were determined from the TOF-SIMS mapping image and the depth profile. TOF-SIMS images were also used to investigate numbers or characters altered with two different red pens. TOF-SIMS was successfully used to determine the sequence of intersecting lines and the forged numbers on the paper. © 2016 American Academy of Forensic Sciences.

Chicago Classification of Esophageal Motility Disorders: Lessons Learned

NARCIS (Netherlands)

Rohof, W. O. A.; Bredenoord, A. J.

2017-01-01

High-resolution manometry (HRM) is increasingly performed worldwide, to study esophageal motility. The Chicago classification is subsequently applied to interpret the manometric findings and facilitate a diagnosis of esophageal motility disorders. This review will discuss new insights regarding the

Analysis and imaging of biocidal agrochemicals using ToF-SIMS.

Science.gov (United States)

Converso, Valerio; Fearn, Sarah; Ware, Ecaterina; McPhail, David S; Flemming, Anthony J; Bundy, Jacob G

2017-09-06

ToF-SIMS has been increasingly widely used in recent years to look at biological matrices, in particular for biomedical research, although there is still a lot of development needed to maximise the value of this technique in the life sciences. The main issue for biological matrices is the complexity of the mass spectra and therefore the difficulty to specifically and precisely detect analytes in the biological sample. Here we evaluated the use of ToF-SIMS in the agrochemical field, which remains a largely unexplored area for this technique. We profiled a large number of biocidal active ingredients (herbicides, fungicides, and insecticides); we then selected fludioxonil, a halogenated fungicide, as a model compound for more detailed study, including the effect of co-occurring biomolecules on detection limits. There was a wide range of sensitivity of the ToF-SIMS for the different active ingredient compounds, but fludioxonil was readily detected in real-world samples (wheat seeds coated with a commercial formulation). Fludioxonil did not penetrate the seed to any great depth, but was largely restricted to a layer coating the seed surface. ToF-SIMS has clear potential as a tool for not only detecting biocides in biological samples, but also mapping their distribution.

Cell motility assays.

Science.gov (United States)

Hague, Angela; Jones, Gareth E

2008-10-01

This report summarises practical aspects to measuring cell motility in culture. The methods described here were discussed at a 1-day European Tissue Culture Society (ETCS-UK) workshop organised by John Masters and Gareth E Jones that was held at University College London on 19th April 2007.

Sorption Analysis of 137Cs On Karawang’s Clay Samples

Directory of Open Access Journals (Sweden)

Budi Setiawan

2016-12-01

Full Text Available The objective of this work is to characterize the specific of distribution coefficient (Kd values of 137Cs onto Karawang’s clay for radioactive waste disposal facility purpose. Sorption phenomena was affected by contact time, ionic strength and loaded concentration of CsCl.  Experiments were done in a batch method, with initial concentration was 10-8 M CsCl in the experiments of contact time and ionic strength effects. In the CsCl loading experiment, the concentration was varied from 10-8 to 10-4 M CsCl and 137Cs radioactive solution was used as a tracer. The solid-liquid ratio is 10-2 g/mL.  The results shown that obtained Kd values were 21,714 and 4035 mL/g after contacted for 8 days for Sample-1 and 2, respectively. The presence of K+ and Na+ ions in solution had reduced the Kd value Cs-137 where the effect of K+ is greater than Na+ on decreased the value of Kd.  The increasing of CsCl concentrations in solution had reduced the value of Kd.  In both samples of clay were closely fit to Freundlich isotherm and pseudo-second order kinetic model.  The results are very useful as the input of the safety assessment activity of site candidate for radioactive waste disposal facility in the future.

SimHap GUI: an intuitive graphical user interface for genetic association analysis.

Science.gov (United States)

Carter, Kim W; McCaskie, Pamela A; Palmer, Lyle J

2008-12-25

Researchers wishing to conduct genetic association analysis involving single nucleotide polymorphisms (SNPs) or haplotypes are often confronted with the lack of user-friendly graphical analysis tools, requiring sophisticated statistical and informatics expertise to perform relatively straightforward tasks. Tools, such as the SimHap package for the R statistics language, provide the necessary statistical operations to conduct sophisticated genetic analysis, but lacks a graphical user interface that allows anyone but a professional statistician to effectively utilise the tool. We have developed SimHap GUI, a cross-platform integrated graphical analysis tool for conducting epidemiological, single SNP and haplotype-based association analysis. SimHap GUI features a novel workflow interface that guides the user through each logical step of the analysis process, making it accessible to both novice and advanced users. This tool provides a seamless interface to the SimHap R package, while providing enhanced functionality such as sophisticated data checking, automated data conversion, and real-time estimations of haplotype simulation progress. SimHap GUI provides a novel, easy-to-use, cross-platform solution for conducting a range of genetic and non-genetic association analyses. This provides a free alternative to commercial statistics packages that is specifically designed for genetic association analysis.

Strontium-90 and cesium-137 in soil (from Jun. 1983 to Sept. 1983)

International Nuclear Information System (INIS)

1983-01-01

Results are presented for the determination of strontium-90 and cesium-137 in soils in Japan. Twenty-seven sampling points were selected all over Japan from Hokkaido to Okinawa by the criteria that the points were spacious and flat without past disturbance and those located in a forest, in a stony area or inside of river banks should be avoided. Soils were taken from two layers of depth, 0 to 5 cm and 5 to 20 cm. After drying, soils were passed through a 2 mm sieve and were employed for radiochemical leaching, separation, and purification of strontium-90 or cesium-137. Radioactivity of strontium-90 or cesium-137 was determined with a low background beta counter normally for 60 minutes. Determined values are presented as pCi/kg and mCi/km 2 for two different depth layers. As for strontium-90 contents, they were ranged from 13.0 +- 3.3 pCi/kg-dry (Aomori, 5 to 20 cm) to 1300 +- 20 pCi/kg-dry (Oota, Shimane Pref., 0 to 5 cm), or from 1.1 +- 0.14 mCi/km 2 (Tsuyama, Okayama Pref., 0 to 5 cm) to 50.0 +- 1.7 mCi/km 2 (Sapporo, 5 to 20 cm). As for cesium-137 contents, they were ranged from 0.5 +- 2.2 pCi/kg-dry (Saga, 5 to 20 cm) to 4700 +- 40 pCi/kg-dry (Oota, Shimane Pref., 0 to 5 cm) or from 0.1 +- 0.42 mCi/km 2 (Saga, 5 to 20 cm) to 120.0 +- 2.0 mCi/km 2 (Oota, Shimane Pref., 5 to 20 cm), and the variance for cesium-137 values were larger than those for strontium-90. Seasonal or local tendency for the contents of the two nuclides were not clarified. (Takagi, S.)

K2-137 b: an Earth-sized planet in a 4.3-h orbit around an M-dwarf

Science.gov (United States)

Smith, A. M. S.; Cabrera, J.; Csizmadia, Sz; Dai, F.; Gandolfi, D.; Hirano, T.; Winn, J. N.; Albrecht, S.; Alonso, R.; Antoniciello, G.; Barragán, O.; Deeg, H.; Eigmüller, Ph; Endl, M.; Erikson, A.; Fridlund, M.; Fukui, A.; Grziwa, S.; Guenther, E. W.; Hatzes, A. P.; Hidalgo, D.; Howard, A. W.; Isaacson, H.; Korth, J.; Kuzuhara, M.; Livingston, J.; Narita, N.; Nespral, D.; Nowak, G.; Palle, E.; Pätzold, M.; Persson, C. M.; Petigura, E.; Prieto-Arranz, J.; Rauer, H.; Ribas, I.; Van Eylen, V.

2018-03-01

We report the discovery in K2's Campaign 10 of a transiting terrestrial planet in an ultra-short-period orbit around an M3-dwarf. K2-137 b completes an orbit in only 4.3 h, the second shortest orbital period of any known planet, just 4 min longer than that of KOI 1843.03, which also orbits an M-dwarf. Using a combination of archival images, adaptive optics imaging, radial velocity measurements, and light-curve modelling, we show that no plausible eclipsing binary scenario can explain the K2 light curve, and thus confirm the planetary nature of the system. The planet, whose radius we determine to be 0.89 ± 0.09 R⊕, and which must have an iron mass fraction greater than 0.45, orbits a star of mass 0.463 ± 0.052 M⊙ and radius 0.442 ± 0.044 R⊙.

Sperm motility and morphology as changing parameters linked to sperm count variations.

Directory of Open Access Journals (Sweden)

Dua A

1996-10-01

Full Text Available Variations in semen analyses of 177 males over a 1 year period were assessed. The average means of total counts, motility, morphology, total motile count and non-motile % were determined for 5 classes of patients ranging from azoospermic to normospermic. Positive relationships between a falling sperm count, a decrease in motility and total motile counts were seen. Also, increasingly, abnormal forms were found with lower sperm counts.

Automatic Bowel Motility Evaluation Technique for Noncontact Sound Recordings

Directory of Open Access Journals (Sweden)

Ryunosuke Sato

2018-06-01

Full Text Available Information on bowel motility can be obtained via magnetic resonance imaging (MRIs and X-ray imaging. However, these approaches require expensive medical instruments and are unsuitable for frequent monitoring. Bowel sounds (BS can be conveniently obtained using electronic stethoscopes and have recently been employed for the evaluation of bowel motility. More recently, our group proposed a novel method to evaluate bowel motility on the basis of BS acquired using a noncontact microphone. However, the method required manually detecting BS in the sound recordings, and manual segmentation is inconvenient and time consuming. To address this issue, herein, we propose a new method to automatically evaluate bowel motility for noncontact sound recordings. Using simulations for the sound recordings obtained from 20 human participants, we showed that the proposed method achieves an accuracy of approximately 90% in automatic bowel sound detection when acoustic feature power-normalized cepstral coefficients are used as inputs to artificial neural networks. Furthermore, we showed that bowel motility can be evaluated based on the three acoustic features in the time domain extracted by our method: BS per minute, signal-to-noise ratio, and sound-to-sound interval. The proposed method has the potential to contribute towards the development of noncontact evaluation methods for bowel motility.

Subcellular boron and fluorine distributions with SIMS ion microscopy in BNCT and cancer research

Energy Technology Data Exchange (ETDEWEB)

Subhash Chandra

2008-05-30

The development of a secondary ion mass spectrometry (SIMS) based technique of Ion Microscopy in boron neutron capture therapy (BNCT) was the main goal of this project, so that one can study the subcellular location of boron-10 atoms and their partitioning between the normal and cancerous tissue. This information is fundamental for the screening of boronated drugs appropriate for neutron capture therapy of cancer. Our studies at Cornell concentrated mainly on studies of glioblastoma multiforme (GBM). The early years of the grant were dedicated to the development of cryogenic methods and correlative microscopic approaches so that a reliable subcellular analysis of boron-10 atoms can be made with SIMS. In later years SIMS was applied to animal models and human tissues of GBM for studying the efficacy of potential boronated agents in BNCT. Under this grant the SIMS program at Cornell attained a new level of excellence and collaborative SIMS studies were published with leading BNCT researchers in the U.S.

Subcellular boron and fluorine distributions with SIMS ion microscopy in BNCT and cancer research

International Nuclear Information System (INIS)

Subhash, Chandra

2008-01-01

The development of a secondary ion mass spectrometry (SIMS) based technique of Ion Microscopy in boron neutron capture therapy (BNCT) was the main goal of this project, so that one can study the subcellular location of boron-10 atoms and their partitioning between the normal and cancerous tissue. This information is fundamental for the screening of boronated drugs appropriate for neutron capture therapy of cancer. Our studies at Cornell concentrated mainly on studies of glioblastoma multiforme (GBM). The early years of the grant were dedicated to the development of cryogenic methods and correlative microscopic approaches so that a reliable subcellular analysis of boron-10 atoms can be made with SIMS. In later years SIMS was applied to animal models and human tissues of GBM for studying the efficacy of potential boronated agents in BNCT. Under this grant the SIMS program at Cornell attained a new level of excellence and collaborative SIMS studies were published with leading BNCT researchers in the U.S.

137Cs in marine sediments of Admiralty Bay, King George Island, Antarctica

International Nuclear Information System (INIS)

Ferreira, Paulo Alves de Lima; Ribeiro, Andreza Portella; Nascimento, Mylene Giseli do; Martins, Cesar de Castro; Mahiques, Michel Michaelovitch de; Montone, Rosalinda Carmelo; Figueira, Rubens Cesar Lopes

2013-01-01

The radionuclide cesium-137 ( 137 Cs) is produced exclusively by anthropogenic processes and primarily by nuclear explosions. This study determined the reference inventory that is 137 Cs associated with the element's original input, and utilized the levels of activity of this radionuclide previously measured in five sediment profiles collected from Admiralty Bay, Antarctica, to investigate the mobility of this element in the environment. 137 Cs has a half-life of 30 years. Because of this, it is environmentally persistent and has been shown to accumulate in marine organisms. The mean reference inventory of this radionuclide in Admiralty Bay sediments, determined using high resolution gamma ray spectrometry, was 20.23 ± 8.94 Bq m −2 , and within the ambient 137 Cs activity range. A model of 137 Cs diffusion–convection was applied to data collected from 1 cm intervals in sediment cores with the aim of providing insights with respect to this element's behavior in sediments. Model results showed a significant correlation between measured and modeled values using the concentrations of 137 Cs, and estimated input into the system from the global fallout of past nuclear tests and expected values based on local sedimentation rates. Results highlight the importance of accounting for the vertical diffusion of 137 Cs in marine sediments when used as a tracer for environmental processes and for assessing potential bioavailability. - Highlights: ► Cesium-137 ( 137 Cs) is produced exclusively by anthropogenic processes. ► A model of diffusion–convection simulated 137 Cs environmental behavior. ► This is important for assessing the bioavailability of this toxic element. ► In Antarctica ice cover influenced the input to the sediments

Sperm motility of externally fertilizing fish and amphibians.

Science.gov (United States)

Browne, R K; Kaurova, S A; Uteshev, V K; Shishova, N V; McGinnity, D; Figiel, C R; Mansour, N; Agney, D; Wu, M; Gakhova, E N; Dzyuba, B; Cosson, J

2015-01-01

We review the phylogeny, sperm competition, morphology, physiology, and fertilization environments of the sperm of externally fertilizing fish and amphibians. Increased sperm competition in both fish and anurans generally increases sperm numbers, sperm length, and energy reserves. The difference between the internal osmolarity and iconicity of sperm cells and those of the aquatic medium control the activation, longevity, and velocity of sperm motility. Hypo-osmolarity of the aquatic medium activates the motility of freshwater fish and amphibian sperm and hyperosmolarity activates the motility of marine fish sperm. The average longevity of the motility of marine fish sperm (~550 seconds) was significantly (P amphibian sperm in general and anurans reversion from internal to external fertilization. Our findings provide a greater understanding of the reproductive biology of externally fertilizing fish and amphibians, and a biological foundation for the further development of reproduction technologies for their sustainable management.

Inventories of fallout 21Pb and 137Cs radionuclides in moorland and woodland soils around Edinburgh urban area (UK)

International Nuclear Information System (INIS)

Likuku, A.S.; Branford, D.; Fowler, D.; Weston, K.J.

2006-01-01

Inventories of fallout 21 Pb and 137 Cs have been measured in moorland and woodland soils around the Edinburgh urban area, using a high purity germanium detector. The 21 Pb inventories in moorland soils were relatively uniform, with a mean value of 2520 ± 270 Bq m -2 . The mean 137 Cs inventory in moorland soils varied greatly from 1310 to 2100 Bq m -2 , with a mean value of 1580 ± 310 Bq m -2 . The variability was ascribed mainly to the non-uniform distribution of fallout Chernobyl 137 Cs. The mean 21 Pb and 137 Cs inventories in woodland canopy soils were found to be 3630 ± 380 Bq m -2 and 2510 ± 510 Bq m -2 , respectively. At sites for which both moorland and woodland data were available, the mean inventories provided fairly similar average enhancements of (47 ± 7)% and (46 ± 18)% of 21 Pb and 137 Cs under woodland canopy soils relative to open grassland soils, respectively. The enhancement factors are broadly in line with other independent findings in literature. Enhancement of both 21 Pb and 137 Cs in woodland soils relative to moorland soils is, in part, due to deposition by impaction during air turbulence, wash-off, gravitational settling and deposition during leaf senescence. Results of this study suggest that these processes affect both 21 Pb and 137 Cs carrier aerosols in a similar way

Nano-SIMS analysis of Mg, Sr, Ba and U in natural calcium carbonate

International Nuclear Information System (INIS)

Sano, Yuji; Shirai, Kotaro; Takahata, Naoto; Hirata, Takafumi; Sturchio, Neil C.

2005-01-01

Concentrations of minor (Mg and Sr) and trace (Ba and U) elements in four natural calcium carbonate samples were first analyzed by inductively coupled plasma mass spectrometry (ICP-MS) after chemical dissolution and calibrated against a standard dolomite. Their homogeneities were checked by in situ laser ablation (LA) ICP-MS with 10-20 spots. The carbonate samples were measured by using a high lateral resolution secondary ion mass spectrometer (Nano-SIMS NS50). A ∼4 nA O - primary beam was used to sputter a 5 - 6-μm diameter crater on the sample surface, and secondary positive ions were extracted for mass analysis using an accelerating voltage of 8 kV and a Mattauch-Herzog geometry. A multi-collector system was adjusted to detect 26 Mg + , 43 Ca + , 88 Sr + , 138 Ba + , 238 U 16 O 2 + ions at the same time. A resolving power of 2500 - 5000 at 10% peak height was attained by an entrance slit set at 40 μm, and each exit slit at 50 μm with adequate flat-topped peaks. The observed 26 Mg/ 43 Ca, 88 Sr/ 43 Ca, 138 Ba/ 43 Ca and 238 U 16 O 2 / 43 Ca ratios agreed well with those measured by LA-ICP-MS. Foraminifera shells were analyzed at 5 - 6 μm scale by Nano-SIMS. There was a large variation of the Mg/Ca ratios, up to ±38%, even in a single fragment of the shell, suggesting that although the ratios provide a useful paleoceanographic proxy at bulk scale, they may reflect a more complex pattern at <10 μm scale. (author)

Investigation of the deuterium solubility in niobium using secondary ion mass spectrometry (SIMS)

International Nuclear Information System (INIS)

Zuechner, H.; Bruening, T.

1991-01-01

From SIMS measurements on deuterium charged niobium foils a pressure-composition isotherm was obtained. The plateau pressure of the α-β-two-phase region is in good agreement with that known from electrochemical p-n isotherm measurements. The solubility in the homogeneous α-phase measured by SIMS, however, is enhanced compared with the electrochemical p-n isotherm, i.e. the homogeneous α-phase is broadened. These results are due to the ion bombardment causing a lattice distortion within the near surface region during the SIMS experiment. (orig.)

The effect of Tribulus terrestris extract on motility and viability of human sperms after cryopreservation.

Science.gov (United States)

Asadmobini, Atefeh; Bakhtiari, Mitra; Khaleghi, Sara; Esmaeili, Farzaneh; Mostafaei, Ali

2017-04-01

Semen cryopreservation produces significant amounts of reactive oxygen species (ROS), which may lead to impairment of sperm morphology, function, and ultimately, male fertility. Since Tribulus terrestris has antioxidant and free-radical-scavenging properties, this study aims to reveal the effect of the Tribulus terrestris extract on motility and vitality of human sperms after cryopreservation. Semen specimens from 80 healthy volunteers were divided into eight groups: fresh control (group I), freeze control (group II), groups III, IV, and V, which had 20, 40, and 50 μg/mL doses of Tribulus terrestris extract added before cryopreservation, and groups VI, VII, and VIII, which were supplemented by these extract doses after the freeze-thaw process. To evaluate the effects of the Tribulus terrestris extract, the semen samples were incubated with the extract and evaluated with a light microscope for motility and viability. After cryopreservation, a significant improvement in spermatozoa viability was observed in group VII. In groups VII and VIII, motility, according to World Health Organization (WHO) criteria, increased considerably (p Tribulus terrestris, which improves human sperm motility and viability, may be due to its antioxidant properties. On the basis of the results, the researchers concluded that Tribulus terrestris can be used as a safe therapeutic alternative to current modalities for the management of motility dysfunction in males. Copyright © 2017 Elsevier Inc. All rights reserved.

NanoSIMS multi-element imaging reveals internalisation and nucleolar targeting for a highly-charged polynuclear platinum compound.

Science.gov (United States)

Wedlock, Louise E; Kilburn, Matt R; Liu, Rong; Shaw, Jeremy A; Berners-Price, Susan J; Farrell, Nicholas P

2013-08-11

Simultaneous multi-element imaging using NanoSIMS (nano-scale secondary ion mass spectrometry), exploiting the novel combination of (195)Pt and (15)N in platinum-am(m)ine antitumour drugs, provides information on the internalisation and subcellular localisation of both metal and ligands, and allows identification of ligand exchange.

Cesium-137 monitoring of aquatic and terrestrial environment in Goiania

International Nuclear Information System (INIS)

Godoy, J.N.O.; Guimaraes, J.R.D.; Gouvea, V.A.; Rochedo, E.R.R.

1988-01-01

During the Goiania radiological accident, aprox. 1200 Ci of Cs - 137 were inadvertently manipulated and an unknown fraction of this total was available for environmental dispertion during at least 6 weeks, before efficient remedial action could be undertaken. The main dispersion pathways were rainwater run-off and soil ressuspension and further deposition. Cs-137 monitoring in the local environment started in the first week of October, including to date aprox. 1300 measurements of soil, vegetable (fruits and kitchen-gardens), ground and drinking water, sediments and fish, aerosol, precipitation and external dose measurement with TL dosimeters, in the surroundings of the main contamination spots. Until the conclusion of de-contamination activities in late December, the ranges of Cs-137 in a 50m radius of evacuated areas were as follows: 10 2 -10 4 Bq/Kg for surface soils and edible vegetables, 10 0 -10 1 mBq/m 3 in air and 10 Bq/l in all water types. River sediment and fish 5-10 Km downstream the accident are ranged respectively 10 2 -10 3 and 10 2 /Kg. These data indicated the pathways and locations for intervention for further reduction of radiation exposure. This intervention consisted mainly in tree-tipping and surface soil removal. (author) [pt

Imaging and differentiation of mouse embryo tissues by ToF-SIMS

Energy Technology Data Exchange (ETDEWEB)

Wu, L; Lu, X; Kulp, K; Knize, M; Berman, E; Nelson, E; Felton, J; Wu, K J

2006-06-16

Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) equipped with a gold ion gun was used to image mouse embryos and differentiate tissue types (brain, spinal cord, skull, rib, heart and liver). Embryos were paraffin-embedded and then de-paraffinized. The robustness and repeatability of the method was determined by analyzing nine tissue slices from three different embryos over a period of several weeks. Using Principal Component Analysis (PCA) to reduce the spectral data generated by ToF-SIMS, histopathologically identified tissue types of the mouse embryos can be differentiated based on the characteristic differences in their mass spectra. These results demonstrate the ability of ToF-SIMS to determine subtle chemical differences even in fixed histological specimens.

6 CFR 13.7 - Complaint.

Science.gov (United States)

2010-01-01

... 6 Domestic Security 1 2010-01-01 2010-01-01 false Complaint. 13.7 Section 13.7 Domestic Security DEPARTMENT OF HOMELAND SECURITY, OFFICE OF THE SECRETARY PROGRAM FRAUD CIVIL REMEDIES § 13.7 Complaint. (a) On or after the date the Department of Justice approves the issuance of a Complaint in accordance...

Estimation of radioactive 137-cesium transportation by litterfall, stemflow and throughfall in the forests of Fukushima

International Nuclear Information System (INIS)

Endo, Izuki; Ohte, Nobuhito; Iseda, Kohei; Tanoi, Keitaro; Hirose, Atsushi; Kobayashi, Natsuko I.; Murakami, Masashi; Tokuchi, Naoko; Ohashi, Mizue

2015-01-01

Since the Fukushima Dai-ichi Nuclear Power Plant accident in March 2011, large areas of the forests around Fukushima have become highly contaminated by radioactive nuclides. To predict the future dynamics of radioactive cesium ( 137 Cs) in the forest catchment, it is important to measure each component of its movement within the forest. Two years after the accident, we estimated the annual transportation of 137 Cs from the forest canopy to the floor by litterfall, throughfall and stemflow. Seasonal variations in 137 Cs transportation and differences between forests types were also determined. The total amount of 137 Cs transported from the canopy to the floor in two deciduous and cedar plantation forests ranged between 3.9 and 11.0 kBq m −2  year −1 . We also observed that 137 Cs transportation with litterfall increased in the defoliation period, simply because of the increased amount of litterfall. 137 Cs transportation with throughfall and stemflow increased in the rainy season, and 137 Cs flux by litterfall was higher in cedar plantation compared with that of mixed deciduous forest, while the opposite result was obtained for stemflow. - Highlights: • Annual flux of 137 Cs by litterfall, throughfall and stemflow was estimated in two types of forest in Fukushima, Japan. • Annual amount of 137 Cs transportation was 3.9–11.0 kBq m −2 year −1 in two years after the accident. • 137 Cs flux by litterfall was higher in cedar plantation than that of mixed deciduous forest. • 137 Cs transportation with throughfall and stemflow increased in rainy season.

Seeking sunlight: rapid phototactic motility of filamentous mat-forming cyanobacteria optimize photosynthesis and enhance carbon burial in Lake Huron’s submerged sinkholes

Science.gov (United States)

Biddanda, Bopaiah A.; McMillan, Adam C.; Long, Stephen A.; Snider, Michael J.; Weinke, Anthony D.

2015-01-01

We studied the motility of filamentous mat-forming cyanobacteria consisting primarily of Oscillatoria-like cells growing under low-light, low-oxygen, and high-sulfur conditions in Lake Huron’s submerged sinkholes using in situ observations, in vitro measurements and time-lapse microscopy. Gliding movement of the cyanobacterial trichomes (100–10,000 μm long filaments, composed of cells ∼10 μm wide and ∼3 μm tall) revealed individual as well as group-coordinated motility. When placed in a petri dish and dispersed in ground water from the sinkhole, filaments re-aggregated into defined colonies within minutes, then dispersed again. Speed of individual filaments increased with temperature from ∼50 μm min-1 or ∼15 body lengths min-1 at 10°C to ∼215 μm min-1 or ∼70 body lengths min-1 at 35°C – rates that are rapid relative to non-flagellated/ciliated microbes. Filaments exhibited precise and coordinated positive phototaxis toward pinpoints of light and congregated under the light of foil cutouts. Such light-responsive clusters showed an increase in photosynthetic yield – suggesting phototactic motility aids in light acquisition as well as photosynthesis. Once light source was removed, filaments slowly spread out evenly and re-aggregated, demonstrating coordinated movement through inter-filament communication regardless of light. Pebbles and pieces of broken shells placed upon intact mat were quickly covered by vertically motile filaments within hours and became fully buried in the anoxic sediments over 3–4 diurnal cycles – likely facilitating the preservation of falling debris. Coordinated horizontal and vertical filament motility optimize mat cohesion and dynamics, photosynthetic efficiency and sedimentary carbon burial in modern-day sinkhole habitats that resemble the shallow seas in Earth’s early history. Analogous cyanobacterial motility may have played a key role in the oxygenation of the planet by optimizing photosynthesis while

WholeCellSimDB: a hybrid relational/HDF database for whole-cell model predictions.

Science.gov (United States)

Karr, Jonathan R; Phillips, Nolan C; Covert, Markus W

2014-01-01

Mechanistic 'whole-cell' models are needed to develop a complete understanding of cell physiology. However, extracting biological insights from whole-cell models requires running and analyzing large numbers of simulations. We developed WholeCellSimDB, a database for organizing whole-cell simulations. WholeCellSimDB was designed to enable researchers to search simulation metadata to identify simulations for further analysis, and quickly slice and aggregate simulation results data. In addition, WholeCellSimDB enables users to share simulations with the broader research community. The database uses a hybrid relational/hierarchical data format architecture to efficiently store and retrieve both simulation setup metadata and results data. WholeCellSimDB provides a graphical Web-based interface to search, browse, plot and export simulations; a JavaScript Object Notation (JSON) Web service to retrieve data for Web-based visualizations; a command-line interface to deposit simulations; and a Python API to retrieve data for advanced analysis. Overall, we believe WholeCellSimDB will help researchers use whole-cell models to advance basic biological science and bioengineering. http://www.wholecellsimdb.org SOURCE CODE REPOSITORY: URL: http://github.com/CovertLab/WholeCellSimDB. © The Author(s) 2014. Published by Oxford University Press.

Biomarkers at the microscopic range : ToF-SIMS molecular imaging of Archaea-derived lipids in a microbial mat

NARCIS (Netherlands)

Thiel, V.; Heim, C.; Arp, G.; Hahmann, U.; Sjovall, P.; Lausmaa, J.

2007-01-01

Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) with a bismuth cluster primary ion source was used for analysing microbial lipid biomarkers in 10-mu m-thick microscopic cryosections of methanotrophic microbial mats from the Black Sea. Without further sample preparation, archaeal isopranyl

Use of experimental plots for assessing Chernobyl-derived fallout of {sup 137}CS in France

Energy Technology Data Exchange (ETDEWEB)

Bonte, Ph.; Sogon, S.; Bourgeois, S.; Terce, M.; Morel, Ch. [Laboratoire des Sciences du Climat et de l' Environnement, avenue de la Terrasse, 91 - Gif-sur-Yvette (France)

2004-07-01

Caesium-137 ({sup 137}Cs) is widely used for the determination of soil erosion and sedimentation rates. However, in Europe, if the additional inputs of {sup 137}Cs fallout associated with the Chernobyl accident have given a supplementary mark to know the chronological history of buried sediments in rivers or wetlands, they have considerably complicated the interpretation of {sup 137}Cs inventories used for estimating soil redistribution on slopes. In fact, determination of Chernobyl-derived fallout {sup 137}Cs is problematic because very few sites have been correctly sampled at the moment of the accident. During the ten years after, it was possible to estimate the fallout measuring the {sup 134}Cs activity for estimating {sup 137}Cs ({sup 137}Cs /{sup 134}Cs 2.0 at the time of the accident). But these measurements are extremely rare, whereas it should be the more accurate method to resolve this question. The more used solution is to use model based on atmospheric circulation and rain precipitation, the main part of fallout been due to atmospheric washing by the rain. Other solution is to compare {sup 137}Cs specific activity of soil samples collected after the accident and older samples. Then, we choose a set of soil samples collected on several experimental plots at different places in France, and sampled before and after the Chernobyl accident, to determine the part of contamination linked to this {sup 137}Cs fallout event with a simple comparison of their {sup 137}Cs specific activity. In fact, national French institutes working on agronomy maintain experimental plots, with varied surface area (1 m{sup 2} 10 m{sup 2} or larger), for monitoring of soil physics and chemistry evolution. Nine sites were studied: two of them close to Paris, one 100 km east of Paris, 3 in Loire basin and 3 in south west, in the Pyrenees Atlantic. These measurements confirm the influence of the Chernobyl radioactive plume over the Paris Basin concerning the {sup 137}Cs fallout. The

Microfabricated ratchet structures for concentrating and patterning motile bacterial cells

International Nuclear Information System (INIS)

Kim, Sang Yub; Lee, Eun Se; Lee, Ho Jae; Lee, Se Yeon; Lee, Sung Kuk; Kim, Taesung

2010-01-01

We present a novel microfabricated concentrator for Escherichia coli that can be a stand-alone and self-contained microfluidic device because it utilizes the motility of cells. First of all, we characterize the motility of E. coli cells and various ratcheting structures that can guide cells to move in a desired direction in straight and circular channels. Then, we combine these ratcheting microstructures with the intrinsic tendency of cells to swim on the right side in microchannels to enhance the concentration rates up to 180 fold until the concentrators are fully filled with cells. Furthermore, we demonstrate that cells can be positioned and concentrated with a constant spacing distance on a surface, allowing spatial patterning of motile cells. These results can be applied to biosorption or biosensor devices that are powered by motile cells because they can be highly concentrated without any external mechanical and electrical energy sources. Hence, we believe that the concentrator design holds considerable potential to be applied for concentrating and patterning other motile microbes and providing a versatile structure for motility study of bacterial cells.

SimWIND: A geospatial infrastructure model for optimizing wind power generation and transmission

International Nuclear Information System (INIS)

Phillips, Benjamin R.; Middleton, Richard S.

2012-01-01

Wind is a clean, enduring energy resource with the capacity to satisfy 20% or more of U.S. electricity demand. Presently, wind potential is limited by a paucity of electrical transmission lines and/or capacity between promising wind resources and primary load centers. We present the model SimWIND to address this shortfall. SimWIND is an integrated optimization model for the geospatial arrangement and cost minimization of wind-power generation–transmission–delivery infrastructure. Given a set of possible wind-farm sites, the model simultaneously determines (1) where and how much power to generate and (2) where to build new transmission infrastructure and with what capacity in order to minimize the cost for delivering a targeted amount of power to load. Costs and routing of transmission lines consider geographic and social constraints as well as electricity losses. We apply our model to the Electric Reliability Council of Texas (ERCOT) Interconnection, considering scenarios that deliver up to 20 GW of new wind power. We show that SimWIND could potentially reduce ERCOT's projected ∼$5B transmission network upgrade line length and associated costs by 50%. These results suggest that SimWIND's coupled generation–transmission–delivery modeling approach could play a critical role in enhancing planning efforts and reducing costs for wind energy integration. - Highlights: ► Wind power is limited by transmission capacity between resources and demands. ► SimWIND is a coupled generation-transmission-delivery model for wind infrastructure. ► The model minimizes costs considering realistic transmission routing and networking. ► We show that SimWIND could save 50% of $5B costs for expanding the Texas grid. ► Results suggest SimWIND may play a critical role in enhancings wind planning efforts.

Short description of PetraSim 5 with TOUGHREACT 1.2 and model structure; Kurzbeschreibung von PetraSim 5 mit TOUGHREACT 1.2 und Modellaufbau

Energy Technology Data Exchange (ETDEWEB)

Hansmeier, Christina

2014-08-15

The modeling of reactive transport processes can improve the understanding of simultaneous thermo-hydro-dynamic and geochemical processes in a repository with respect to the long-term safety analysis. The program TOUGHREACT with the user interface PetraSim is able to calculate coupled processes. It is possible to develop 1D, 2D and 3D models in porous, fissured and heterogeneous materials for non-isothermal multi-phase flows. Using modular extensions additional processes (for instance surface complexing, Pitzer parameters, salt precipitation etc.) can e taken into account. The report gives a short overview on the handling of the program PetraSim including the model structure, the settings and exemplary calculations. The application of the user interface PetraSim with THOUGHREACT 1.2 is supposed for the geochemical modeling of diffusive transport of corrosion products from waste containers within the bentonite barrier. The focus of the model will be the investigations of the porosity and permeability variations in the surrounding bentonite.

Distribution characteristics of 137Cs in soil profiles under different land uses and its implication

International Nuclear Information System (INIS)

Mian Li; Wenyi Yao; Jishan Yang; Zhenzhou Shen; Er Yang

2016-01-01

This paper presents a study of the distribution of 137 Cs in soils under three different land uses in a semiarid watershed. The results showed the average inventory of 137 Cs in the cultivated land, woodland and grassland was 888, 1489 and 1650 Bq/m 2 , respectively. The pattern of depth distribution of 137 Cs in the soil profiles with cultivated land, woodland and grassland was disturbed, eroding and aggrading, and normal profiles, respectively. The coefficient of variation of 137 Cs inventory varied from 8.9 to 38.8 % for different land uses. (author)

Distribution of Cs137 in soils from Bahia state, Brazil

International Nuclear Information System (INIS)

Sakai, T.

1977-01-01

A high-resolution gamma-ray spectrometry method was developed in order to study the distribution of Cs 137 in topsoils of State of Bahia (Brazil). The results has shown concentrations varying between 0.6 and 6.0 nCi/m 2 . Correlation of the Cs 137 concentration with environmental and ohysico-chemical parameters has shown a tendency for greatest accumulation in soils with regions of greatest precipitation rates: 2.0 nCi/m 2 , on the average, for regions with 700mm to 1,000 mm/year and 2.8 nCi/m 2 , on the average, in regions with 1,700 mm to 2,000 mm/year. On the other hand, an anti-correlation between this radionuclide and both calcium and clay content, for soils of similar type and under similar climatic conditions is seen. (C.D.G.) [pt

Semi-structured Interview Measure of Stigma (SIMS) in psychosis: Assessment of psychometric properties.

Science.gov (United States)

Wood, Lisa; Burke, Eilish; Byrne, Rory; Enache, Gabriela; Morrison, Anthony P

2016-10-01

Stigma is a significant difficulty for people who experience psychosis. To date, there have been no outcome measures developed to examine stigma exclusively in people with psychosis. The aim of this study was develop and validate a semi-structured interview measure of stigma (SIMS) in psychosis. The SIMS is an eleven item measure of stigma developed in consultation with service users who have experienced psychosis. 79 participants with experience of psychosis were recruited for the purposes of this study. They were administered the SIMS alongside a battery of other relevant outcome measures to examine reliability and validity. A one-factor solution was identified for the SIMS which encompassed all ten rateable items. The measure met all reliability and validity criteria and illustrated good internal consistency, inter-rater reliability, test retest reliability, criterion validity, construct validity, sensitivity to change and had no floor or ceiling effects. The SIMS is a reliable and valid measure of stigma in psychosis. It may be more engaging and acceptable than other stigma measures due to its semi-structured interview format. Crown Copyright © 2016. Published by Elsevier B.V. All rights reserved.

137 Cs as a tracer of the Catalan current

International Nuclear Information System (INIS)

Sanchez-Cabeza, J.A.; Molero, J.; Merino, J.; Pujol, L.; Mitchell, P.I.

1995-01-01

A number of nuclear power installations located in the north-western Mediterranean (NWM) area are known to enhance 137 Cs levels in various marine compartments. The nuclear fuel reprocessing plant at Marcoule (France) has been reported to originate a significant increase of 137 Cs in Rhone river waters and sediments because of the discharge of low-level liquid radioactive waste. This radionuclide may be used as a tracer of oceanographic processes in the NWM; in fact, 137 Cs of Rhone river origin has been detected in the Gulf of Lions by several authors. The results reported in this work correspond to various transect experiments in waters of the Catalan Sea and show that: (i) surface salinity measurements confirmed the presence of the Catalan current in the Cap de Creus area; (ii) the 1991 Cap de Creus transect showed clearly the presence of 137 Cs above a baseline level of 4.3 ± 0.2 Bq.m -3 ; (iii) the Cap de Salou transect showed elevated levels towards the coast; (iv) the 1992 Cap de Creus transect showed no structure at all. Therefore, it was concluded that traces of 137 Cs from the Marcoule nuclear fuel reprocessing plant were transported by the Catalan current and were detectable in the Catalan Sea with a complex spatio-temporal structure. (authors). 25 refs., 4 figs

Beating the numbers through strategic intervention materials (SIMs): Innovative science teaching for large classes

Science.gov (United States)

Alboruto, Venus M.

2017-05-01

The study aimed to find out the effectiveness of using Strategic Intervention Materials (SIMs) as an innovative teaching practice in managing large Grade Eight Science classes to raise the performance of the students in terms of science process skills development and mastery of science concepts. Utilizing experimental research design with two groups of participants, which were purposefully chosen, it was obtained that there existed a significant difference in the performance of the experimental and control groups based on actual class observation and written tests on science process skills with a p-value of 0.0360 in favor of the experimental class. Further, results of written pre-test and post-test on science concepts showed that the experimental group with the mean of 24.325 (SD =3.82) performed better than the control group with the mean of 20.58 (SD =4.94), with a registered p-value of 0.00039. Therefore, the use of SIMs significantly contributed to the mastery of science concepts and the development of science process skills. Based on the findings, the following recommendations are offered: 1. that grade eight science teachers should use or adopt the SIMs used in this study to improve their students' performance; 2. training-workshop on developing SIMs must be conducted to help teachers develop SIMs to be used in their classes; 3. school administrators must allocate funds for the development and reproduction of SIMs to be used by the students in their school; and 4. every division should have a repository of SIMs for easy access of the teachers in the entire division.

Simulation-Based e-Learning Tools for Science,Engineering, and Technology Education(SimBeLT)

Science.gov (United States)

Davis, Doyle V.; Cherner, Y.

2006-12-01

The focus of Project SimBeLT is the research, development, testing, and dissemination of a new type of simulation-based integrated e-learning set of modules for two-year college technical and engineering curricula in the areas of thermodynamics, fluid physics, and fiber optics that can also be used in secondary schools and four-year colleges. A collection of sophisticated virtual labs is the core component of the SimBeLT modules. These labs will be designed to enhance the understanding of technical concepts and underlying fundamental principles of these topics, as well as to master certain performance based skills online. SimBeLT software will help educators to meet the National Science Education Standard that "learning science and technology is something that students do, not something that is done to them". A major component of Project SimBeLT is the development of multi-layered technology-oriented virtual labs that realistically mimic workplace-like environments. Dynamic data exchange between simulations will be implemented and links with instant instructional messages and data handling tools will be realized. A second important goal of Project SimBeLT labs is to bridge technical skills and scientific knowledge by enhancing the teaching and learning of specific scientific or engineering subjects. SimBeLT builds upon research and outcomes of interactive teaching strategies and tools developed through prior NSF funding (http://webphysics.nhctc.edu/compact/index.html) (Project SimBeLT is partially supported by a grant from the National Science Foundation DUE-0603277)

Increased count, motility, and total motile sperm cells collected across three consecutive ejaculations within 24 h of oocyte retrieval: implications for management of men presenting with low numbers of motile sperm for assisted reproduction.

Science.gov (United States)

Said, Al-Hasen; Reed, Michael L

2015-07-01

The purpose of this study was to quantitate changes in seminal volume, sperm count, motility, qualitative forward progression, and total motile sperm cells per ejaculate, across three consecutive ejaculates collected from individuals within 24 h preceding an IVF cycle. Men presenting with oligoasthenozoospermia or asthenozoospemia attempted three ejaculates within 24 h preceding IVF. Ejaculate 1 was produced the afternoon prior to oocyte retrieval, and ejaculates 2 and 3 were produced the morning of oocyte retrieval with 2-3 h between collections. Ejaculates 1 and 2 were extended 1:1 v/v with room temperature rTYBS. Test tubes were placed into a beaker of room temperature water, then placed at 4 °C for gradual cooling. Ejaculate 3 was not extended, but pooled with ejaculates 1 and 2 and processed for intracytoplasmic sperm injection (ICSI). Out of 109 oocyte retrievals, 28 men were asked to attempt multiple consecutive ejaculations. Among this population, 25/28 (89.3 %) were successful, and 3/28 men (10.7 %) could only produce two ejaculates. Mean volumes for ejaculates 1, 2, and 3 were significantly different from each other (p sperm counts, motility, qualitative forward progression, and total motile cells per ejaculate for the ejaculates1, 2, and 3 demonstrated the following: ejaculates 2 and 3 were not significantly different, but counts, motility, and total motile sperm were improved over ejaculate 1 (p sperm in this population by 8-fold compared to the first ejaculate alone, facilitating avoidance of sperm cryopreservation and additional centrifugation steps that could affect sperm viability and/or function.

Reactive barriers for 137Cs retention

International Nuclear Information System (INIS)

Krumhansl, James L.; Brady, Patrick V.; Anderson, Howard L.

2000-01-01

137 Cs was dispersed globally by cold war activities and, more recently, by the Chernobyl accident. Engineered extraction of 137 Cs from soils and groundwaters is exceedingly difficult. Because the half life of 137 Cs is only 30.2 years, remediation might be more effective (and less costly) if 137 Cs bioavailability could be demonstrably limited for even a few decades by use of a reactive barrier. Essentially permanent isolation must be demonstrated in those few settings where high nuclear level wastes contaminated the environment with 135 Cs (half life 2.3x10 6 years) in addition to 137 Cs. Clays are potentially a low-cost barrier to Cs movement, though their long-term effectiveness remains untested. To identify optimal clays for Cs retention Cs resorption was measured for five common clays: Wyoming Montmorillonite (SWy-1), Georgia Kaolinites (KGa-1 and KGa-2), Fithian Illite (F-Ill), and K-Metabentonite (K-Mbt). Exchange sites were pre-saturated with 0.16 M CsCl for 14 days and readily exchangeable Cs was removed by a series of LiNO 3 and LiCl washes. Washed clay were then placed into dialysis bags and the Cs release to the deionized water outside the bags measured. Release rates from 75 to 139 days for SWy-1, K-Mbt and F- 111 were similar; 0.017 to 0.021% sorbed Cs released per day. Both kaolinites released Cs more rapidly (0.12 to 0.05% of the sorbed Cs per day). In a second set of experiments, clays were doped for 110 days and subjected to an extreme and prolonged rinsing process. All the clays exhibited some capacity for irreversible Cs uptake so most soils have some limited ability to act as a natural barrier to Cs migration. However, the residual loading was greatest on K-Mbt (∼ 0.33 wt% Cs). Thus, this clay would be the optimal material for constructing artificial reactive barriers

The Radiological Condition of 137 Cs in the Northern Adriatic Sea (2006-2007)

International Nuclear Information System (INIS)

Pavicic-Hamer, D.; Lulic, S.

2008-01-01

Over the past 30 years, the Croatian Rudjer Boskovic Institute, Center for Marine Research Rovinj has studied the levels and distribution of long-lived radionuclides in different marine samples. Artificial radioactivity in the northern Adriatic Sea was assessed by analysis of the concentration of 137Cs in seawater, sediment and marine organisms. A comparison of radioactive contamination was made between different ecosystems including in front of the river Po delta, the protected area of Lim bay and the Rovinj coastal area from 2006 to 2007. At the station which was under the direct influence of the Po river discharge the concentrations of 137Cs in seawater were back to pre-Chernobyl values (2.65 Bq m-3), although in sediment values were slightly higher (9.06 Bq/kg). Inside Lim bay the concentrations of 137Cs in seawater were low (1.99 Bq m -3 ) and in mussel Mytilus galloprovincialis were undetectable in this period. The concentrations of 137Cs in seawater in the surface layer in the Rovinj coastal area remained constant (2.43 Bq m-3), as were found within the top sediment layer (2.15 Bq/kg). The concentrations of 137Cs were detectable at very low levels in Mugil cephalus and Sardina pilchardus. Fucus virsoides and Mullus barbatus can be considered a good bio indicator of monitoring radio contamination in the Adriatic Sea. The radiological status of 137Cs in the Adriatic Sea has returned to the pre-accident level, taking into consideration their natural fluctuations due to physico-chemical and hydrological parameters in the investigated area. Such knowledge of radioactive contamination could be useful in the estimation of the state of the environment and as an input to plans for the protection of the Adriatic Sea.(author)

Patterns of Cs-137 and Sr-90 distribution in conjugated landscape systems

Science.gov (United States)

Korobova, E.

2012-04-01

transported by the river [3]. Local zones of enhanced 137Cs accumulation in soil samples and some plant species were found in island systems, and the Yenisey upper delta island in particular. Hydromica identified in samples was considered significant for 137Cs accumulation in floodplain soils. The distinct tendency of secondary redistribution of the global 137Cs fallout in soils due to wind and water transport and subsequent accumulation, 137Cs accumulation in topsoil and slightly over the permafrost table were characteristic for both catchments. Therefore 137Cs proved to be an effective isotope tracer for studying and mapping technogenic contamination and the recent processes of water and particulate mass transport on the global, regional and local scales. Obtained results may be useful for monitoring, eco-geochemical evaluation and regionalizing of the areas contaminated by artificial radionuclides. 1. Korobova E.M., Ermakov A., Linnik V., 1998. Applied Geochemistry 13, .7, 803-814. 2. E.M. Korobova, S.L. Romanov, 2009. Chemometrics and Intelligent Laboratory Systems 99, 1-8. 3. E.M. Korobova, N.G. Ukraintseva, V.V. Surkov, J.E. Brown, W. Standring and A.P. Borisov, 2009. Eds: Mattia N. Gallo, Marco N. Ferrari. River Pollution Research Progress. Nova Science Publishers, Inc. N-Y, 91-156.

Mitochondrial respiratory efficiency is positively correlated with human sperm motility.

Science.gov (United States)

Ferramosca, Alessandra; Provenzano, Sara Pinto; Coppola, Lamberto; Zara, Vincenzo

2012-04-01

To correlate sperm mitochondrial respiratory efficiency with variations in sperm motility and with sperm morphologic anomalies. Sperm mitochondrial respiratory activity was evaluated with a polarographic assay of oxygen consumption carried out in hypotonically-treated sperm cells. A possible relationship among sperm mitochondrial respiratory efficiency, sperm motility, and morphologic anomalies was investigated. Mitochondrial respiratory efficiency was positively correlated with sperm motility and negatively correlated with the percentage of immotile spermatozoa. Moreover, midpiece defects impaired mitochondrial functionality. Our data indicate that an increase in sperm motility requires a parallel increase in mitochondrial respiratory capacity, thereby supporting the fundamental role played by mitochondrial oxidative phosphorylation in sperm motility of normozoospermic subjects. These results are of physiopathological relevance because they suggest that disturbances of sperm mitochondrial function and of energy production could be responsible for asthenozoospermia. Copyright © 2012 Elsevier Inc. All rights reserved.

SIMS analysis: Development and evaluation program summary

International Nuclear Information System (INIS)

Groenewold, G.S.; Appelhans, A.D.; Ingram, J.C.; Delmore, J.E.; Dahl, D.A.

1996-11-01

This report provides an overview of the ''SIMS Analysis: Development and Evaluation Program'', which was executed at the Idaho National Engineering Laboratory from mid-FY-92 to the end of FY-96. It should be noted that prior to FY-1994 the name of the program was ''In-Situ SIMS Analysis''. This report will not go into exhaustive detail regarding program accomplishments, because this information is contained in annual reports which are referenced herein. In summary, the program resulted in the design and construction of an ion trap secondary ion mass spectrometer (IT-SIMS), which is capable of the rapid analysis of environmental samples for adsorbed surface contaminants. This instrument achieves efficient secondary ion desorption by use of a molecular, massive ReO 4 - primary ion particle. The instrument manages surface charge buildup using a self-discharging principle, which is compatible with the pulsed nature of the ion trap. The instrument can achieve high selectivity and sensitivity using its selective ion storage and MS/MS capability. The instrument was used for detection of tri-n-butyl phosphate, salt cake (tank cake) characterization, and toxic metal speciation studies (specifically mercury). Technology transfer was also an important component of this program. The approach that was taken toward technology transfer was that of component transfer. This resulted in transfer of data acquisition and instrument control software in FY-94, and ongoing efforts to transfer primary ion gun and detector technology to other manufacturers

Visualisation of regional motility disorders in the left ventricular wall using radionuclide ventriculography

International Nuclear Information System (INIS)

Kaiser, H.

1985-01-01

During this study ECG-triggered intramyocardial scintiscans were obtained following in-vivo labelling of erythrocytes (99mTc) from 74 patients showing coronary heart disease and analysed with the aim to assess the suitability of this method for the detection of mural motility disorders and for visualisation of the accurate size of the left ventricle. The results of the intramyocardial scintiscans were evaluated against those of levocardiograms recorded for reasons of comparison and found to demonstrate mural motility disorders with a specifity of 0.70 and a sensitivity of 0.75. Relatively reliable data to diagnose those myocardial motility disorders were obtained by combined analysis of the individual scintiphotographic displays of amplitudes, phases, ejection fractions and positive gradients. The investigation of further parameters like the recorded stroke volumes and negative gradients provided no additional information. The phase recording proved to be the most suitable parameter to assess the size of the left ventricle. All other recordings gave a distorted picture of the left ventricle in terms of a reduction in size. (TRV) [de

The Concentration of Cs-137 Pollutan in Water Pumps in Several Cities of Java Island

International Nuclear Information System (INIS)

Nareh, M; Warsono, A; Indiyati, T; Yurfida; Buchari

1996-01-01

The aim of this research is to know the concentration of Cs-137 in the water pumps. The concentration of Cs-137 pollutant in the water pumps from 10 cities in Java Island had been determined. Cs-137 in big volume of water was collected in cation exchanger and eluted with 6N HCl solution. Cs-137 in the eluen was precipitated by ammoniumphosphomolybdate (AMP), soluted using NaOH solution and finally measured using Spectrometer Gamma Canberra 35 Plus with high pure germanium detector (HPGe). The results of measurement indicate that the concentration of cs-137 in the tested water pumps are in the range of under minimum detectable (BDT) to 2,06 + 0,79 mBq/I

Spatial variability of caesium-137 activities in soils in the Jura mountains

International Nuclear Information System (INIS)

Pimou-Heumou, G.; Lucot, E.; Crini, N.; Briot, M.; Badot, P.M.

2011-01-01

275 soil samples were taken in the catchment area of the upper part of the Doubs river located in the Jura mountains according to a sampling strategy designed to evaluate the extent of the spatial variability of 137 Cs activities and to identify its main sources. 137 Cs activities ranged between about 1000 and 12000 Bq.m -2 with an average of approximately 3600 Bq.m -2 . The spatial variability of the contamination is high: 137 Cs activity shows statistically significant links with altitude, soil organic matter and land cover, whereas the other studied parameters, i.e. soil type and topographic position, do not constitute significant sources of variation. These results are discussed in terms of evaluation of the radioactive contamination on a regional scale. They show that to be satisfactory, a sampling strategy must necessarily take into account the various types of land cover. (authors)

Clostridium difficile suppresses colonic vasoactive intestinal peptide associated with altered motility

Directory of Open Access Journals (Sweden)

A. Nassif

1995-01-01

Full Text Available We investigated whether Clostridium difficile toxin alters colonic tissue levels of vasoactive intestinal peptide (VIP at the expense of changes in colonic motility in the isolated perfused rabbit left colon. Colonic inflammation was induced by the intracolonic administration of 10−8 M C. difflcile toxin. Strain gauge transducers were sewn onto the serosal surface of the colon to evaluate colonic motility. C. difflcile administration produced histologic changes consistent with epithelial damage. This was associated with an increased production of prostaglandin E2 and thromboxane B2. Tissue levels of VIP but not substance P were significantly reduced. This was associated with an increased number of contractions per minute and an average force of each colonic contraction. These results suggest that tissue levels of VIP are suppressed by C. difflcile and may participate in colonic dysmotility during active inflammation.

Automated measurement of cell motility and proliferation

Directory of Open Access Journals (Sweden)

Goff Julie

2005-04-01

Full Text Available Abstract Background Time-lapse microscopic imaging provides a powerful approach for following changes in cell phenotype over time. Visible responses of whole cells can yield insight into functional changes that underlie physiological processes in health and disease. For example, features of cell motility accompany molecular changes that are central to the immune response, to carcinogenesis and metastasis, to wound healing and tissue regeneration, and to the myriad developmental processes that generate an organism. Previously reported image processing methods for motility analysis required custom viewing devices and manual interactions that may introduce bias, that slow throughput, and that constrain the scope of experiments in terms of the number of treatment variables, time period of observation, replication and statistical options. Here we describe a fully automated system in which images are acquired 24/7 from 384 well plates and are automatically processed to yield high-content motility and morphological data. Results We have applied this technology to study the effects of different extracellular matrix compounds on human osteoblast-like cell lines to explore functional changes that may underlie processes involved in bone formation and maintenance. We show dose-response and kinetic data for induction of increased motility by laminin and collagen type I without significant effects on growth rate. Differential motility response was evident within 4 hours of plating cells; long-term responses differed depending upon cell type and surface coating. Average velocities were increased approximately 0.1 um/min by ten-fold increases in laminin coating concentration in some cases. Comparison with manual tracking demonstrated the accuracy of the automated method and highlighted the comparative imprecision of human tracking for analysis of cell motility data. Quality statistics are reported that associate with stage noise, interference by non

SIM-RIBRAS: A Monte-Carlo simulation package for RIBRAS system

Energy Technology Data Exchange (ETDEWEB)

Leistenschneider, E.; Lepine-Szily, A.; Lichtenthaeler, R. [Departamento de Fisica Nuclear, Instituto de Fisica, Universidade de Sao Paulo (Brazil)

2013-05-06

SIM-RIBRAS is a Root-based Monte-Carlo simulation tool designed to help RIBRAS users on experience planning and experimental setup enhancing and caracterization. It is divided into two main programs: CineRIBRAS, aiming beam kinematics, and SolFocus, aiming beam optics. SIM-RIBRAS replaces other methods and programs used in the past, providing more complete and accurate results and requiring much less manual labour. Moreover, the user can easily make modifications in the codes, adequating it for specific requirements of an experiment.

The medical ethics of Dr J Marion Sims: a fresh look at the historical record.

Science.gov (United States)

Wall, L L

2006-06-01

Vesicovaginal fistula was a catastrophic complication of childbirth among 19th century American women. The first consistently successful operation for this condition was developed by Dr J Marion Sims, an Alabama surgeon who carried out a series of experimental operations on black slave women between 1845 and 1849. Numerous modern authors have attacked Sims's medical ethics, arguing that he manipulated the institution of slavery to perform ethically unacceptable human experiments on powerless, unconsenting women. This article reviews these allegations using primary historical source material and concludes that the charges that have been made against Sims are largely without merit. Sims's modern critics have discounted the enormous suffering experienced by fistula victims, have ignored the controversies that surrounded the introduction of anaesthesia into surgical practice in the middle of the 19th century, and have consistently misrepresented the historical record in their attacks on Sims. Although enslaved African American women certainly represented a "vulnerable population" in the 19th century American South, the evidence suggests that Sims's original patients were willing participants in his surgical attempts to cure their affliction-a condition for which no other viable therapy existed at that time.

Detecting feigned postconcussional and posttraumatic stress symptoms with the structured inventory of malingered symptomatology (SIMS).

Science.gov (United States)

Parks, Adam C; Gfeller, Jeffrey; Emmert, Natalie; Lammert, Hannah

2017-01-01

The Structured Inventory of Malingered Symptomatology (SIMS) is a standalone symptom validity test (SVT) designed as a screening measure to detect a variety of exaggerated psychological symptoms. A number of studies have explored the accuracy of the SIMS in litigious and clinical populations, yet few have examined the validity of the SIMS in detecting feigned symptoms of postconcussional disorder (PCD) and posttraumatic stress disorder (PTSD). The present study examined the sensitivity of the SIMS in detecting undergraduate simulators (N = 78) feigning symptoms of PCD, PTSD, and the comorbid presentation of both PCD and PTSD symptomatologies. Overall, the SIMS Total score produced the highest sensitivities for the PCD symptoms and PCD+PTSD symptoms groups (.89 and .85, respectively), and to a lesser extent, the PTSD symptoms group (.69). The Affective Disorders (AF) subscale was most sensitive to the PTSD symptoms group compared to the PCD and PCD+PTSD symptoms groups. Additional sensitivity values are presented and examined at multiple scale cutoff scores. These findings support the use of the SIMS as a SVT screening measure for PCD and PTSD symptom exaggeration in neuropsychological assessment.

Concentrations of 108mAg, 137Cs, and 210Pb in oyster (Crassostrea gigas) on the Japanese coast in relation to the distribution and behavior of radionuclides in sea water

International Nuclear Information System (INIS)

Ishikawa, Y.; Kikuchi, T.; Sekine, T.; Yoshihara, K.

1995-01-01

Concentrations of 108m Ag, 137 Cs, and 210 Pb in oysters (Crassostrea gigas) were measured for about 10 years on the northeast coast of Japan. Silver-108m was detected in oyster samples collected from an open bay, and its concentrations decreased from the initial value of about 30 mBq/kg fresh in the early 1980s to the value of about 10 mBq/kg fresh in the early 1990s. This decrease could be mainly explained by effects of the ocean current in the early 1980s, and the coastal sea water thereafter, as well as by the advection and diffusion in the ocean. In the nearly-closed bays, concentrations of 108m Ag and 210 Pb in oysters were remarkably lower than in the open bays. It suggests that scavenging of silver and lead from the sea water effectively occurred in the nearly-closed bays. In contrast, concentrations of 137 Cs in oysters were similar in the open bays and in the nearly-closed bays. (author). 17 refs., 5 figs., 3 tabs

Atmospheric deposition of radioactive cesium (137Cs) associated with dust events in East Asia

International Nuclear Information System (INIS)

Fujiwara, H.

2010-01-01

and sup(137)Cs weekly in spring 2007. During one week of the period of weekly monitoring in 2007, we observed an Asian dust event. During that week, atmospheric sup(137)Cs deposition reached 62.3 mBq/square m and accounted for 67% of the total deposition of sup(137)Cs during the entire eight-week monitoring period. This result suggests that the primary source of sup(137)Cs deposition in this part of Japan in spring is likely to be dust transported from the East Asian continent

Vertical distribution of 90Sr and 137 Cs in uncultivated soil in three localities of central Bohemia

International Nuclear Information System (INIS)

Schlesingerova, E.; Hejnova, P.; Tecl, J.; Mirchi, R.; Setrna, L.; Macurova, L.

2005-01-01

The purpose of this work was study the vertical distribution of 90 Sr and 137 Cs in uncultivated soils. The radionuclide contents in different soil layers and the cumulative deposition of radionuclides at the study sites were to be established with a view to possible identification of their sources. The present paper investigated the vertical distribution of 90 Sr and 137 Cs in uncultivated soil samples in central Bohemia and inventory of these radionuclides at representative sampling sites. These data provide the information about the availability, movement and environmental behaviour of these important radionuclides in the study region. The cumulative deposition of 90 Sr at sites 1, 2 and 3 were found of 700, 1390 and 970 Bq/m 2 , respectively, The cumulative deposition of 137 Cs at sites 1, 2 and 3 were found of 260, 510 and 10000 Bq/m 2 , respectively. The obtained values of 9S r are about 47% lower than the value of UNSCEAR inventories, but our average value of 137 Cs (3590 Bq/m 2 ) agree with the cumulative deposition of 137 Cs from the atmospheric nuclear tests in northern 40 grad - 50 grad temperate zone according UNSCEAR inventories. The radioactive decay should have reduced the reported 90 Sr and 137 Cs inventories in the northern hemisphere to 2190 Bq/m 2 and 3580 Bq/m 2 , respectively. The concentration of 90 Sr and 137 Cs increased proportionally to the SOM content in soil, but the difference of the degree of correlation among 90 Sr and 137 CS could be explained by the fact that SOM held 137 Cs more strongly than 90 Sr. 137 Cs showed very low mobility in soil profiles in undisturbed soils, therefore, it was concentrated in the upper 10 cm of the soils. Although the concentration of 90 Sr increased with organic content through an anion exchange reaction, which is enhanced by SOM keeping high cationic exchange capacity, the retention of Sr was relatively weak in contrast to Cs. It is related with high mobility of Sr that is a member of group II in the

CystiSim - An Agent-Based Model for Taenia solium Transmission and Control.

Science.gov (United States)

Braae, Uffe Christian; Devleesschauwer, Brecht; Gabriël, Sarah; Dorny, Pierre; Speybroeck, Niko; Magnussen, Pascal; Torgerson, Paul; Johansen, Maria Vang

2016-12-01

Taenia solium taeniosis/cysticercosis was declared eradicable by the International Task Force for Disease Eradication in 1993, but remains a neglected zoonosis. To assist in the attempt to regionally eliminate this parasite, we developed cystiSim, an agent-based model for T. solium transmission and control. The model was developed in R and available as an R package (http://cran.r-project.org/package=cystiSim). cystiSim was adapted to an observed setting using field data from Tanzania, but adaptable to other settings if necessary. The model description adheres to the Overview, Design concepts, and Details (ODD) protocol and consists of two entities-pigs and humans. Pigs acquire cysticercosis through the environment or by direct contact with a tapeworm carrier's faeces. Humans acquire taeniosis from slaughtered pigs proportional to their infection intensity. The model allows for evaluation of three interventions measures or combinations hereof: treatment of humans, treatment of pigs, and pig vaccination, and allows for customary coverage and efficacy settings. cystiSim is the first agent-based transmission model for T. solium and suggests that control using a strategy consisting of an intervention only targeting the porcine host is possible, but that coverage and efficacy must be high if elimination is the ultimate goal. Good coverage of the intervention is important, but can be compensated for by including an additional intervention targeting the human host. cystiSim shows that the scenarios combining interventions in both hosts, mass drug administration to humans, and vaccination and treatment of pigs, have a high probability of success if coverage of 75% can be maintained over at least a four year period. In comparison with an existing mathematical model for T. solium transmission, cystiSim also includes parasite maturation, host immunity, and environmental contamination. Adding these biological parameters to the model resulted in new insights in the potential

The Chicago classification of motility disorders: an update.

Science.gov (United States)

Roman, Sabine; Gyawali, C Prakash; Xiao, Yinglian; Pandolfino, John E; Kahrilas, Peter J

2014-10-01

The Chicago Classification defines esophageal motility disorders in high resolution manometry. This is based on individual scoring of 10 swallows performed in supine position. Disorders of esophago-gastric junction (EGJ) outflow obstruction are defined by a median integrated relaxation pressure above the limit of normal and divided into 3 achalasia subtypes and EGJ outflow obstruction. Major motility disorders (aperistalsis, distal esophageal spasm, and hypercontractile esophagus) are patterns not encountered in controls in the context of normal EGJ relaxation. Finally with the latest version of the Chicago Classification, only two minor motor disorders are considered: ineffective esophageal motility and fragmented peristalsis. Copyright © 2014 Elsevier Inc. All rights reserved.

LandSIM3D: modellazione in real time 3D di dati geografici

Directory of Open Access Journals (Sweden)

Lambo Srl Lambo Srl

2009-03-01

Full Text Available LandSIM3D: realtime 3D modelling of geographic data LandSIM3D allows to model in 3D an existing landscape in a few hours only and geo-referenced offering great landscape analysis and understanding tools. 3D projects can then be inserted into the existing landscape with ease and precision. The project alternatives and impact can then be visualized and studied into their immediate environmental. The complex evolution of the landscape in the future can also be simulated and the landscape model can be manipulated interactively and better shared with colleagues. For that reason, LandSIM3D is different from traditional 3D imagery solutions, normally reserved for computer graphics experts. For more information about LandSIM3D, go to www.landsim3d.com.

Distribution of 137Cs in environmental soil and crude drugs

International Nuclear Information System (INIS)

Kimura, Shoujiro; Yamaoki, Rumi

1997-01-01

Radioactivity of 137 Cs and 40 K was determined on commercially available products of Houttuynia Herb which were imported from China and Taiwan or processed in Japan, and of Houttuynia cordata harvested in 15 places in Japan and the surrounding soil. On Houttuynia Herb, the concentrations of 137 Cs and 40 K were LTD (less than detectable)-7.6 Bq/kg dry and 743-1964 Bq/kg dry, respectively, suggesting than the concentration of 137 Cs was less than 1% of that of 40 K. The domestic products were found to contain higher concentrations of 137 Cs and 40 K than the imported ones. The concentration of 137 Cs of Houttuynia cordata harvested in Japan ranged from 0.8 Bq/kg dry to 172 Bq/kg dry, while the concentration of 40 K was almost the same as that of the commercial products. The concentration ratio of 40 K in Houttuynia cordata to that in the soil was correlated with the moisture content and the ignition loss of the soil. However, the concentration ratio of 137 Cs did not show a very clear correlation. When 15 g of Houttuynia Herb or Houttuynia cordata was daily decocted and given for 1 year the former showed the committed dose equivalent of 0.02-0.5 μSv and the latter 0.06-12 μSv. Both of these values were less than 0.5% of the annual effective dose equivalent from the nature, 2.4 mSv. (author)

ToF-SIMS observation for evaluating the interaction between amyloid β and lipid membranes.

Science.gov (United States)

Aoyagi, Satoka; Shimanouchi, Toshinori; Kawashima, Tomoko; Iwai, Hideo

2015-04-01

The adsorption behaviour of amyloid beta (Aβ), thought to be a key peptide for understanding Alzheimer's disease, was investigated by means of time-of-flight secondary ion mass spectrometry (ToF-SIMS). Aβ aggregates depending on the lipid membrane condition though it has not been fully understood yet. In this study, Aβ samples on different lipid membranes, 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC), 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) and 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), were observed with ToF-SIMS and the complex ToF-SIMS data of the Aβ samples was interpreted using data analysis techniques such as principal component analysis (PCA), gentle-SIMS (G-SIMS) and g-ogram. DOPC and DMPC are liquid crystal at room temperature, while DPPC is gel at room temperature. As primary ion beams, Bi3(+) and Ar cluster ion beams were used and the effect of an Ar cluster ion for evaluating biomolecules was also studied. The secondary ion images of the peptide fragment ions indicated by G-SIMS and g-ogram were consistent with the PCA results. It is suggested that Aβ is adsorbed homogeneously on the liquid-crystalline-phase lipid membranes, while it aggregates along the lipid on the gel-phase lipid membrane. Moreover, in the results using the Ar cluster, the influence of contamination was reduced.

Evaluation of Esophageal Motility Utilizing the Functional Lumen Imaging Probe.

Science.gov (United States)

Carlson, Dustin A; Kahrilas, Peter J; Lin, Zhiyue; Hirano, Ikuo; Gonsalves, Nirmala; Listernick, Zoe; Ritter, Katherine; Tye, Michael; Ponds, Fraukje A; Wong, Ian; Pandolfino, John E

2016-12-01

Esophagogastric junction (EGJ) distensibility and distension-mediated peristalsis can be assessed with the functional lumen imaging probe (FLIP) during a sedated upper endoscopy. We aimed to describe esophageal motility assessment using FLIP topography in patients presenting with dysphagia. In all, 145 patients (aged 18-85 years, 54% female) with dysphagia that completed upper endoscopy with a 16-cm FLIP assembly and high-resolution manometry (HRM) were included. HRM was analyzed according to the Chicago Classification of esophageal motility disorders; major esophageal motility disorders were considered "abnormal". FLIP studies were analyzed using a customized program to calculate the EGJ-distensibility index (DI) and generate FLIP topography plots to identify esophageal contractility patterns. FLIP topography was considered "abnormal" if EGJ-DI was esophageal motility and 29 normal motility. In all, 17 (50%) had abnormal FLIP topography including 13 (37%) with abnormal EGJ-DI. FLIP topography provides a well-tolerated method for esophageal motility assessment (especially to identify achalasia) at the time of upper endoscopy. FLIP topography findings that are discordant with HRM may indicate otherwise undetected abnormalities of esophageal function, thus FLIP provides an alternative and complementary method to HRM for evaluation of non-obstructive dysphagia.

Monte Carlo simulation and scatter correction of the GE Advance PET scanner with SimSET and Geant4

International Nuclear Information System (INIS)

Barret, Olivier; Carpenter, T Adrian; Clark, John C; Ansorge, Richard E; Fryer, Tim D

2005-01-01

For Monte Carlo simulations to be used as an alternative solution to perform scatter correction, accurate modelling of the scanner as well as speed is paramount. General-purpose Monte Carlo packages (Geant4, EGS, MCNP) allow a detailed description of the scanner but are not efficient at simulating voxel-based geometries (patient images). On the other hand, dedicated codes (SimSET, PETSIM) will perform well for voxel-based objects but will be poor in their capacity of simulating complex geometries such as a PET scanner. The approach adopted in this work was to couple a dedicated code (SimSET) with a general-purpose package (Geant4) to have the efficiency of the former and the capabilities of the latter. The combined SimSET+Geant4 code (SimG4) was assessed on the GE Advance PET scanner and compared to the use of SimSET only. A better description of the resolution and sensitivity of the scanner and of the scatter fraction was obtained with SimG4. The accuracy of scatter correction performed with SimG4 and SimSET was also assessed from data acquired with the 20 cm NEMA phantom. SimG4 was found to outperform SimSET and to give slightly better results than the GE scatter correction methods installed on the Advance scanner (curve fitting and scatter modelling for the 300-650 keV and 375-650 keV energy windows, respectively). In the presence of a hot source close to the edge of the field of view (as found in oxygen scans), the GE curve-fitting method was found to fail whereas SimG4 maintained its performance

Sperm motility in fishes. (II) Effects of ions and osmolality: a review.

Science.gov (United States)

Alavi, Sayyed Mohammad Hadi; Cosson, Jacky

2006-01-01

The spermatozoa of most fish species are immotile in the testis and seminal plasma. Therefore, motility is induced after the spermatozoa are released into the aqueous environment during natural reproduction or into the diluent during artificial reproduction. There are clear relationships between seminal plasma composition and osmolality and the duration of fish sperm motility. Various parameters such as ion concentrations (K+, Na+, and Ca2+), osmotic pressure, pH, temperature and dilution rate affect motility. In the present paper, we review the roles of these ions on sperm motility in Salmonidae, Cyprinidae, Acipenseridae and marine fishes, and their relationship with seminal plasma composition. Results in the literature show that: 1. K+ is a key ion controlling sperm motility in Salmonidae and Acipenseridae in combination with osmotic pressure; this control is more simple in other fish species: sperm motility is prevented when the osmotic pressure is high (Cyprinidae) or low (marine fishes) compared to that of the seminal fluid. 2. Cations (mostly divalent, such as Ca2+) are antagonistic with the inhibitory effect of K+ on sperm motility. 3. In many species, Ca2+ influx and K+ or Na+ efflux through specific ionic channels change the membrane potential and eventually lead to an increase in cAMP concentration in the cell, which constitutes the initiation signal for sperm motility in Salmonidae. 4. Media that are hyper- and hypo-osmotic relative to seminal fluid trigger sperm motility in marine and freshwater fishes, respectively. 5. The motility of fish spermatozoa is controlled through their sensitivity to osmolality and ion concentrations. This phenomenon is related to ionic channel activities in the membrane and governs the motility mechanisms of axonemes.

Retention of data in heat-damaged SIM cards and potential recovery methods.

Science.gov (United States)

Jones, B J; Kenyon, A J

2008-05-02

Examination of various SIM cards and smart card devices indicates that data may be retained in SIM card memory structures even after heating to temperatures up to 450 degrees C, which the National Institute of Standards and Technology (NIST) has determined to be approximately the maximum average sustained temperature at desk height in a house fire. However, in many cases, and certainly for temperatures greater than 450 degrees C, the SIM card chip has suffered structural or mechanical damage that renders simple probing or rewiring ineffective. Nevertheless, this has not necessarily affected the data, which is stored as charge in floating gates, and alternative methods for directly accessing the stored charge may be applicable.

Application of secondary ions mass spectrometry (SIMS) in studies of internal contamination

International Nuclear Information System (INIS)

Amaral, Ademir; Galle, Pierre; Colas-Linhart, Nicole

2000-01-01

Secondary Ion Mass Spectrometry (SIMS) permits the detection of stable and radioactive nuclides. Based on the ablation of specimens by ion bombardment this mass spectrometry method allows a rapid assessment of trace elements in biological samples. Its resolving mass power provides an efficient analytical method and, in particular, it makes possible accurate isotopic ratio determination. In this work, the application of SIMS has been investigated in studies of internal contamination. In vivo studies were carried out using duodenal tissue sections from rats contaminated with cerium. Tests were performed to localize this element as a result of the contamination. In this report, analytical procedures and the potential of SIMS in biological research are presented and discussed. (author)

137Cs distribution and geochemistry of Lena River (Siberia) drainage basin lake sediments

International Nuclear Information System (INIS)

Johnson-Pyrtle, A.; Scott, M.R.; Laing, T.E.; Smol, J.P.

2000-01-01

The Lena River is the second largest river that discharges into the Arctic Ocean. It is therefore important to determine not only the direct impact its discharge has on the 137Cs concentration of the Arctic, but also the potential its drainage basin has as a 137Cs source. 137Cs surface sediment concentrations and inventory values, which range from 4.97 to 338 Bq kg -1 and 357 to 1732 Bq m -2 , respectively, were determined for the Lena River drainage basin lake samples, via gamma analysis. The average geochemical and mineralogical composition of a subset of samples was also determined using neutron activation analysis, X-ray diffraction and X-ray fluorescence spectrometry techniques. Results of these geochemical analyses allowed for the identification of key geochemical factors that influence the distribution of 137Cs in the Lena River drainage basin. 137Cs profiles indicate that Lena River drainage basin lacustrine sediments serve as a record of 137Cs fallout. Based on the downcore 137Cs, %illite, %smectite, %Al and %Mn distribution patterns, it was concluded that a small fraction of non-selectively bound 137Cs was remobilized at depth in some cores. Inconsistencies between the actual 137Cs fallout record and the 137Cs profiles determined for the lake sediments were attributed to 137Cs remobilization in subsurface sediments. In addition to establishing the agreement between the global atmospheric fallout record and the downcore 137Cs distribution patterns determined for these sediments, results indicate that 137Cs deposited during periods of maximum atmospheric release was buried and is not susceptible to surface erosion processes. However, mean 137Cs concentrations of the lacustrine surface sediments (125 Bq kg -1 ) are still significantly higher than those of the nearby Lena River estuary (11.22 Bq kg -1 ) and Laptev Sea (6.00 Bq kg -1 ). Our study suggests that the Lena River drainage basin has the potential to serve as a source of 137Cs to the adjacent Arctic

Microscopic Analysis of Bacterial Motility at High Pressure

Science.gov (United States)

Nishiyama, Masayoshi; Sowa, Yoshiyuki

2012-01-01

The bacterial flagellar motor is a molecular machine that converts an ion flux to the rotation of a helical flagellar filament. Counterclockwise rotation of the filaments allows them to join in a bundle and propel the cell forward. Loss of motility can be caused by environmental factors such as temperature, pH, and solvation. Hydrostatic pressure is also a physical inhibitor of bacterial motility, but the detailed mechanism of this inhibition is still unknown. Here, we developed a high-pressure microscope that enables us to acquire high-resolution microscopic images, regardless of applied pressures. We also characterized the pressure dependence of the motility of swimming Escherichia coli cells and the rotation of single flagellar motors. The fraction and speed of swimming cells decreased with increased pressure. At 80 MPa, all cells stopped swimming and simply diffused in solution. After the release of pressure, most cells immediately recovered their initial motility. Direct observation of the motility of single flagellar motors revealed that at 80 MPa, the motors generate torque that should be sufficient to join rotating filaments in a bundle. The discrepancy in the behavior of free swimming cells and individual motors could be due to the applied pressure inhibiting the formation of rotating filament bundles that can propel the cell body in an aqueous environment. PMID:22768943

Motility of Marichromatium gracile in Response to Light, Oxygen, and Sulfide

DEFF Research Database (Denmark)

Thar, Roland Matthias; Kühl, Michael

2001-01-01

The motility of the purple sulfur bacterium Marichromatium gracile was investigated under different light regimes in a gradient capillary setup with opposing oxygen and sulfide gradients. The gradients were quantified with microsensors, while the behavior of swimming cells was studied by video...... microscopy in combination with a computerized cell tracking system. M. gracile exhibited photokinesis, photophobic responses, and phobic responses toward oxygen and sulfide. The observed migration patterns could be explained solely by the various phobic responses. In the dark, M. gracile formed an ~500-µm...

Observation of endoplasmic reticulum tubules via TOF-SIMS tandem mass spectrometry imaging of transfected cells.

Science.gov (United States)

Chini, Corryn E; Fisher, Gregory L; Johnson, Ben; Tamkun, Michael M; Kraft, Mary L

2018-02-26

Advances in three-dimensional secondary ion mass spectrometry (SIMS) imaging have enabled visualizing the subcellular distributions of various lipid species within individual cells. However, the difficulty of locating organelles using SIMS limits efforts to study their lipid compositions. Here, the authors have assessed whether endoplasmic reticulum (ER)-Tracker Blue White DPX ® , which is a commercially available stain for visualizing the endoplasmic reticulum using fluorescence microscopy, produces distinctive ions that can be used to locate the endoplasmic reticulum using SIMS. Time-of-flight-SIMS tandem mass spectrometry (MS 2 ) imaging was used to identify positively and negatively charged ions produced by the ER-Tracker stain. Then, these ions were used to localize the stain and thus the endoplasmic reticulum, within individual human embryonic kidney cells that contained higher numbers of endoplasmic reticulum-plasma membrane junctions on their surfaces. By performing MS 2 imaging of selected ions in parallel with the precursor ion (MS 1 ) imaging, the authors detected a chemical interference native to the cell at the same nominal mass as the pentafluorophenyl fragment from the ER-Tracker stain. Nonetheless, the fluorine secondary ions produced by the ER-Tracker stain provided a distinctive signal that enabled locating the endoplasmic reticulum using SIMS. This simple strategy for visualizing the endoplasmic reticulum in individual cells using SIMS could be combined with existing SIMS methodologies for imaging intracellular lipid distribution and to study the lipid composition within the endoplasmic reticulum.

A Genome-wide RNAi Screen for Microtubule Bundle Formation and Lysosome Motility Regulation in Drosophila S2 Cells

Directory of Open Access Journals (Sweden)

Amber L. Jolly

2016-01-01

Full Text Available Long-distance intracellular transport of organelles, mRNA, and proteins (“cargo” occurs along the microtubule cytoskeleton by the action of kinesin and dynein motor proteins, but the vast network of factors involved in regulating intracellular cargo transport are still unknown. We capitalize on the Drosophila melanogaster S2 model cell system to monitor lysosome transport along microtubule bundles, which require enzymatically active kinesin-1 motor protein for their formation. We use an automated tracking program and a naive Bayesian classifier for the multivariate motility data to analyze 15,683 gene phenotypes and find 98 proteins involved in regulating lysosome motility along microtubules and 48 involved in the formation of microtubule filled processes in S2 cells. We identify innate immunity genes, ion channels, and signaling proteins having a role in lysosome motility regulation and find an unexpected relationship between the dynein motor, Rab7a, and lysosome motility regulation.

The effect of membrane-regulated actin polymerization on a two-phase flow model for cell motility

KAUST Repository

Kimpton, L. S.

2014-07-23

Two-phase flow models have been widely used to model cell motility and we have previously demonstrated that even the simplest, stripped-down, 1D model displays many observed features of cell motility [Kimpton, L.S., Whiteley, J.P., Waters, S.L., King, J.R. & Oliver, J.M. (2013) Multiple travelling-wave solutions in a minimal model for cell motility. Math. Med. Biol. 30, 241 - 272]. In this paper, we address a limitation of the previous model.We show that the two-phase flow framework can exhibit travelling-wave solutions with biologically plausible actin network profiles in two simple models that enforce polymerization or depolymerization of the actin network at the ends of the travelling, 1D strip of cytoplasm. © 2014 The authors 2014. Published by Oxford University Press on behalf of the Institute of Mathematics and its Applications. All rights reserved.

Cesium-137. Environment. Man

International Nuclear Information System (INIS)

Moiseev, A.A.

1985-01-01

Analysis of all main sourses of cerium-137 formation and intake into the external medium is given. Special attention is paid to the estimation of possible influence of rapidly developing nuclear power industry on contamination of the external medium by the radionuclide. Levels of contamination of the external medium by cerium-137, main regularities of its migration through food chains, levels of its intake and accumulation in population's organisms in USSR and its separate regions, are considered. Great attention is paid to the control methods of external environmental contamination by cesium-137 and to its measurements in human body

Regional gastrointestinal contractility parameters using the wireless motility capsule

DEFF Research Database (Denmark)

Farmer, A D; Wegeberg, A-M L; Brock, B

2018-01-01

BACKGROUND: The wireless motility capsule concurrently measures temperature, pH and pressure as it traverses the gastrointestinal tract. AIMS: To describe normative values for motility/contractility parameters across age, gender and testing centres. METHODS: Healthy participants underwent...

tms-sim - Timing Models Scheduling Simulation Framework: Release 2014-12

OpenAIRE

Kluge, Florian

2015-01-01

tms-sim is a framework for the simulation and evaluation of scheduling algorithms. It is being developed to support our work on real-time task scheduling based on time-utility and history-cognisant utility functions. We publish tms-sim under the conditions of the GNU GPL to make our results reproducible and in the hope that it may be useful for others. This report describes the usage of the TMS framework libraries and how they can be used to build further simulation environments. It is not in...

skeleSim: an extensible, general framework for population genetic simulation in R

Science.gov (United States)

Parobek, Christian M.; Archer, Frederick I.; DePrenger-Levin, Michelle E.; Hoban, Sean M.; Liggins, Libby; Strand, Allan E.

2016-01-01

Simulations are a key tool in molecular ecology for inference and forecasting, as well as for evaluating new methods. Due to growing computational power and a diversity of software with different capabilities, simulations are becoming increasingly powerful and useful. However, the widespread use of simulations by geneticists and ecologists is hindered by difficulties in understanding these softwares’ complex capabilities, composing code and input files, a daunting bioinformatics barrier, and a steep conceptual learning curve. skeleSim (an R package) guides users in choosing appropriate simulations, setting parameters, calculating genetic summary statistics, and organizing data output, in a reproducible pipeline within the R environment. skeleSim is designed to be an extensible framework that can ‘wrap’ around any simulation software (inside or outside the R environment) and be extended to calculate and graph any genetic summary statistics. Currently, skeleSim implements coalescent and forward-time models available in the fastsimcoal2 and rmetasim simulation engines to produce null distributions for multiple population genetic statistics and marker types, under a variety of demographic conditions. skeleSim is intended to make simulations easier while still allowing full model complexity to ensure that simulations play a fundamental role in molecular ecology investigations. skeleSim can also serve as a teaching tool: demonstrating the outcomes of stochastic population genetic processes; teaching general concepts of simulations; and providing an introduction to the R environment with a user-friendly graphical user interface (using shiny). PMID:27736016

SemFunSim: a new method for measuring disease similarity by integrating semantic and gene functional association.

Directory of Open Access Journals (Sweden)

Liang Cheng

Full Text Available Measuring similarity between diseases plays an important role in disease-related molecular function research. Functional associations between disease-related genes and semantic associations between diseases are often used to identify pairs of similar diseases from different perspectives. Currently, it is still a challenge to exploit both of them to calculate disease similarity. Therefore, a new method (SemFunSim that integrates semantic and functional association is proposed to address the issue.SemFunSim is designed as follows. First of all, FunSim (Functional similarity is proposed to calculate disease similarity using disease-related gene sets in a weighted network of human gene function. Next, SemSim (Semantic Similarity is devised to calculate disease similarity using the relationship between two diseases from Disease Ontology. Finally, FunSim and SemSim are integrated to measure disease similarity.The high average AUC (area under the receiver operating characteristic curve (96.37% shows that SemFunSim achieves a high true positive rate and a low false positive rate. 79 of the top 100 pairs of similar diseases identified by SemFunSim are annotated in the Comparative Toxicogenomics Database (CTD as being targeted by the same therapeutic compounds, while other methods we compared could identify 35 or less such pairs among the top 100. Moreover, when using our method on diseases without annotated compounds in CTD, we could confirm many of our predicted candidate compounds from literature. This indicates that SemFunSim is an effective method for drug repositioning.

Background distributions of 239+240Pu and 137Cs of upland soil in Rokkasho, Japan

International Nuclear Information System (INIS)

Ohtsuka, Yoshihito; Iyogi, Takashi; Kakiuchi, Hideki; Hisamatsu, Shunichi; Inaba, Jiro

2003-01-01

The background distributions of Pu and 137 Cs in soil were investigated in Rokkasho, Aomori Prefecture, where the first commercial nuclear fuel reprocessing plant in Japan is now being constructed. Soil core samples to 1 m depth were collected at 13 upland fields in Rokkasho and control sites in Hachinohe and Hirosaki. Since fields under yam (Dioscorea babatus) cultivation, which is a common crop in Rokkasho, were dug to approximately 1 m depth at harvesting, depth profiles of fallout radionuclides are heavily disturbed for most fields in Rokkasho. The mean inventories of 239+240 Pu and 137 Cs in three fields with no yam cultivation history were 116 Bq m -2 and 3.4 kBq m -2 , respectively and similar to values in Hachinohe. However, the inventories were approximately a half of those in Hirosaki. The mean ratio of 239P u/ 240 Pu for all studied fields was 0.18±0.04, and similar to that of global fallout. The Pu concentrations correlate very well with 137 Cs (r=0.97) in spite of heavy disturbance of soil, and the ratio of 239+240 Pu/ 137 Cs was 0.037±0.007, which is a typical value for global fallout. (author)

Different computer-assisted sperm analysis (CASA) systems highly influence sperm motility parameters.

Science.gov (United States)

Boryshpolets, S; Kowalski, R K; Dietrich, G J; Dzyuba, B; Ciereszko, A

2013-10-15

In this study, we examined different computer-assisted sperm analysis (CASA) systems (CRISMAS, Hobson Sperm Tracker, and Image J CASA) on the exact same video recordings to evaluate the differences in sperm motility parameters related to the specific CASA used. To cover a wide range of sperm motility parameters, we chose 12-second video recordings at 25 and 50 Hz frame rates after sperm motility activation using three taxonomically distinct fish species (sterlet: Acipenser ruthenus L.; common carp: Cyprinus carpio L.; and rainbow trout: Oncorhynchus mykiss Walbaum) that are characterized by essential differences in sperm behavior during motility. Systematically higher values of velocity and beat cross frequency (BCF) were observed in video recordings obtained at 50 Hz frame frequency compared with 25 Hz for all three systems. Motility parameters were affected by the CASA and species used for analyses. Image J and CRISMAS calculated higher curvilinear velocity (VCL) values for rainbow trout and common carp at 25 Hz frequency compared with the Hobson Sperm Tracker, whereas at 50 Hz, a significant difference was observed only for rainbow trout sperm recordings. No significant difference was observed between the CASA systems for sterlet sperm motility at 25 and 50 Hz. Additional analysis of 1-second segments taken at three time points (1, 6, and 12 seconds of the recording) revealed a dramatic decrease in common carp and rainbow trout sperm speed. The motility parameters of sterlet spermatozoa did not change significantly during the 12-second motility period and should be considered as a suitable model for longer motility analyses. Our results indicated that the CASA used can affect motility results even when the same motility recordings are used. These results could be critically altered by the recording quality, time of analysis, and frame rate of camera, and could result in erroneous conclusions. Copyright © 2013 Elsevier Inc. All rights reserved.

Preparation and characterization of cesium-137 aluminosilicate pellets for radioactive source applications

International Nuclear Information System (INIS)

Schultz, F.J.; Tompkins, J.A.; Haff, K.W.; Case, F.N.

1981-07-01

Twenty-seven fully loaded 137 Cs aluminosilicate pellets were fabricated in a hot cell by the vacuum hot pressing of a cesium carbonate/montmorillonite clay mixture at 1500 0 C and 570 psig. Four pellets were selected for characterization studies which included calorimetric measurements, metallography, scanning electron microscope and electron backscattering (SEM-BSE), electron microprobe, x-ray diffraction, and cesium ion leachability measurements. Each test pellet contained 437 to 450 curies of 137 Cs as determined by calorimetric measurements. Metallographic examinations revealed a two-phase system: a primary, granular, gray matrix phase containing large and small pores and small pore agglomerations, and a secondary fused phase interspersed throughout the gray matrix. SEM-BSE analyses showed that cesium and silicon were uniformly distributed throughout both phases of the pellet. This indicated that the cesium-silicon-clay reaction went to completion. Aluminum homogeneity was unconfirmed due to the high background noise associated with the inherent radioactivity of the test specimens. X-ray diffraction analyses of both radioactive and non-radioactive aluminosilicate pellets confirmed the crystal lattice structure to be pollucite. Cesium ion quasistatic leachability measurements determined the leach rates of fully loaded 137 Cs sectioned pollucite pellets to date to be 4.61 to 34.4 x 10 -10 kg m -2 s -1 , while static leach tests performed on unsectioned fully loaded pellets showed the leach rates of the cesium ion to date to be 2.25 to 3.41 x 10 -12 kg m -2 s -1 . The cesium ion diffusion coefficients through the pollucite pellet were calculated using Fick's first and second laws of diffusion. The diffusion coefficients calculated for three tracer level 137 Cs aluminosilicate pellets were 1.29 x 10 -16 m 2 s -1 , 6.88 x 10 -17 m 2 s -1 , and 1.35 x 10 -17 m 2 s -1 , respectively

Iodine-129, Iodine-127 and Caesium-137 in the environment: soils from Germany and Chile

International Nuclear Information System (INIS)

Daraoui, A.; Michel, R.; Gorny, M.; Jakob, D.; Sachse, R.; Synal, H.-A.; Alfimov, V.

2012-01-01

Soil profiles from Bavaria in southern Germany and from Chile were analysed for 129 I by accelerator mass spectrometry (AMS), for 127 I by inductively coupled plasma mass spectrometry (ICP-MS), and for 137 Cs by gamma-spectrometry. The mean deposition density of 137 Cs in soils from Bavaria was (41 × 1.5 ±1 ) kBq m −2 (geometric mean and geometric standard deviation), originating mostly from the Chernobyl fall-out. The deposition density of 129 I in these soils was (109 × 1.5 ±1 ) mBq m −2 . The dominant sources of 129 I in Bavaria are, however, the reprocessing plants La Hague and Sellafield and not the Chernobyl fall-out. The 129 I/ 127 I isotopic ratios of the Bavarian soils were between 10 −7 and 10 −10 , i.e. 10 2 –10 5 times higher than the ratios observed for the samples from Chile. The 129 I integral deposition densities in Chile, Easter Island and Antarctica were between 0.3 mBq m −2 and 2 mBq m −2 . In these soils, the observed 129 I/ 127 I ratios were about 10 −12 . The soils from Chile allow the determination of the 129 I fall-out from the atmospheric nuclear weapons explosions undisturbed from contaminations due to releases from reprocessing plants. An upper limit of the integral 129 I deposition density of the atmospheric nuclear weapons explosions on the Southern Hemisphere (27°S) is about 1 mBq m −2 . Finally, the dependence of the migration behaviour of 137 Cs, 127 I and of 129 I on the soil properties is discussed. It turns out that there is a distinctly different behaviour of 127 I, 129 I, and 137 Cs in the soils exhibiting different sorption mechanisms for old and recent iodine as well as for 137 Cs. - Highlights: ► I-129 from European reprocessing plants drastically changed its natural abundances. ► We report here inventories of the Cs-137 and I-129 in Bavaria and Chile. ► The dominant sources of I-129 in Bavaria are the European reprocessing plants. ► The dominant sources of I-129 in Chile are the atmospheric

Bacterial motility in the sea and its ecological implications

DEFF Research Database (Denmark)

Grossart, Hans-Peter; Riemann, Lasse; Azam, F.

2001-01-01

the coast of La Jolla, California, as well as a mesocosm study to examine bacterial motility and its relationship to environmental variables. Dark-field microscopy revealed periods of sustained low (fall and winter, ...). Bacteria in natural seawater did not swim constantly nor at constant speeds; over 40% swam algae, bacteria...... swimming. Our results show that a variable fraction of marine bacteria is able to respond to loci of organic matter, e.g. organic particles and algae, and that motility underlies dynamic patterns of ecological relationships (symbiosis, competition, parasitism) between bacteria and algae. Since motility may...

Cesium-137 inventories in Alaskan Tundra, lake and marine sediments: An indicator of recent organic material transport?

International Nuclear Information System (INIS)

Grebmeier, J.M.; Cooper, L.W.; Larsen, I.L.; Solis, C.; Olsen, C.R.

1993-01-01

Tundra sampling was accomplished in 1989--1990 at Imnavait Creek, Alaska (68 degree 37' N, 149 degree 17' W). Inventories of 137 Cs (102--162 mBq/cm 2 ) are close to expectations, based upon measured atmospheric deposition for this latitude. Accumulated inventories of 137 Cs in tundra decrease by up to 50% along a transect to Prudhoe Bay (70 degree 13' N, 148 degree 30' W). Atmospheric deposition of 137 Cs decreased with latitude in the Arctic, but declines in deposition would have been relatively small over this distance (200 km). This suggests a recent loss of 137 Cs and possibly associated organic matter from tundra over the northern portions of the transect between Imnavait Creek and Prudhoe Bay. Sediments from Toolik Lake (68 degree 38' N, 149 degree 38' W) showed widely varying 137 Cs inventories, from a low of 22 mBq/cm 2 away from the lake inlet, to a high between 140 to >200 mBq/cm 2 near the main stream inflow. This was indicative of recent accumulation of cesium and possibly organic material associated with it in arctic lakes, although additional sampling is needed

Mechanical stress as a regulator of cell motility

Science.gov (United States)

Putelat, T.; Recho, P.; Truskinovsky, L.

2018-01-01

The motility of a cell can be triggered or inhibited not only by an applied force but also by a mechanically neutral force couple. This type of loading, represented by an applied stress and commonly interpreted as either squeezing or stretching, can originate from extrinsic interaction of a cell with its neighbors. To quantify the effect of applied stresses on cell motility we use an analytically transparent one-dimensional model accounting for active myosin contraction and induced actin turnover. We show that stretching can polarize static cells and initiate cell motility while squeezing can symmetrize and arrest moving cells. We show further that sufficiently strong squeezing can lead to the loss of cell integrity. The overall behavior of the system depends on the two dimensionless parameters characterizing internal driving (chemical activity) and external loading (applied stress). We construct a phase diagram in this parameter space distinguishing between static, motile, and collapsed states. The obtained results are relevant for the mechanical understanding of contact inhibition and the epithelial-to-mesenchymal transition.

Analysis of 210 Pb and 137 Cs in diets of university students

International Nuclear Information System (INIS)

Saito, Roberto T.; Cunha, Ieda I.L.; Maihara, Vera A.; Favaro, Deborah I.T.

2000-01-01

In this work, 210 P and 137 Cs were determined in the male students diets (age: 19-25) of Sao Paulo University, by gamma spectrometry. The sampling was made using the duplicate portion methodology, which consists in collecting duplicate portions of all food and beverage consumed during three days of a week. The levels obtained for 210 Pb in these samples varied from the Minimum Detectable Concentration (0.43 Bq.kg -1 ) to 1.68 Bq.kg -1 . For 137 Cs, the values ranged from the Minimum Detectable Concentration (0.17 Bq.kg -1 ) to 0.95 Bq.kg -1 . An estimate of the daily ingestion of those radionuclides was made according to the data obtained. The values varied from 78 to 309 mBq.d -1 for 210 Pb, and 53 to 157 mBq.d -1 , for 137 Cs, among the diets analyzed. The data obtained these diets agreed with the data obtained for other authors. (author)

Speciation of {sup 90}Sr and {sup 137}Cs in Techa river water

Energy Technology Data Exchange (ETDEWEB)

Osipov, D.; Andreev, S.; Pryakhin, E. [Urals Research Center for Radiation Medicine (Russian Federation); Teien, H.C. [Norwegian University of Life Sciences - UMB, Center of Excellence in Environmental Radioactivity - CERAD (Norway)

2014-07-01

The concentration and speciation of {sup 90}Sr and {sup 137}Cs were measured in the upper, middle and lower reaches of Techa River, South Ural, Russia in 2012 and 2013. To obtain information of the physical-chemical forms of the radionuclides (RN) in Techa River water, at site size fractionation of water was performed using filtration and ultrafiltration. Using both membrane filters (10 μm and 0.45 μm) and hollow fiber (10 kDa cutoff), following size fractionation were determined: - Particulate RN: size fraction 0.45-10 μm. Excluded by 0.45 μm membrane filter, but passing 10 μm membrane filter - Colloidal RN: size fraction 10 kDa - 0.45 μm. Excluded by hollow fibre of 10 kDa cutoff, but passing 0.45 μm membrane filter - Low molecular mass (LMM) RN: less than 10 kDa. Determined in ultra-filtrated water. Results demonstrated that the concentration of {sup 90}Sr in samples, passed through 10 μm membrane filter, is practically equal to its concentration in ultra-filtered water, both in spring and summer 2012 and 2013. This suggests that {sup 90}Sr is not associated with particulate or colloidal material in the river water, but mainly presents as LMM species, probably ions in a biologically available form. {sup 137}Cs was, however present in different size fractions and the distribution of size fractions depending upon location in river and time of sampling. In the upper part of Techa River {sup 137}Cs was mainly present as LMM species, about 70% and 100% in spring 2012 and 2013, respectively. The remaining part was present as particles larger than 0.45 μm. In the summer 2012, about 15% of the radionuclide was in LMM form and, consequently, almost equal quantities - 46% and 39% - were in colloidal and particulate forms, respectively. At station in the middle reach of Techa River, about 25% and 40% of {sup 137}Cs was present as LMM species, in spring 2012 and 2013, respectively. The remaining part was mainly present as colloidal species. At station in the lower

SIMS depth profiling of working environment nanoparticles

Science.gov (United States)

Konarski, P.; Iwanejko, I.; Mierzejewska, A.

2003-01-01

Morphology of working environment nanoparticles was analyzed using sample rotation technique in secondary ion mass spectrometry (SIMS). The particles were collected with nine-stage vacuum impactor during gas tungsten arc welding (GTAW) process of stainless steel and shielded metal arc welding (SMAW) of mild steel. Ion erosion of 300-400 nm diameter nanoparticles attached to indium substrate was performed with 2 keV, 100 μm diameter, Ar + ion beam at 45° ion incidence and 1 rpm sample rotation. The results show that both types of particles have core-shell morphology. A layer of fluorine, chlorine and carbon containing compounds covers stainless steel welding fume particles. The cores of these particles are enriched in iron, manganese and chromium. Outer shell of mild steel welding fume particles is enriched in carbon, potassium, chlorine and fluorine, while the deeper layers of these nanoparticles are richer in main steel components.

SIMS depth profiling of working environment nanoparticles

Energy Technology Data Exchange (ETDEWEB)

Konarski, P.; Iwanejko, I.; Mierzejewska, A

2003-01-15

Morphology of working environment nanoparticles was analyzed using sample rotation technique in secondary ion mass spectrometry (SIMS). The particles were collected with nine-stage vacuum impactor during gas tungsten arc welding (GTAW) process of stainless steel and shielded metal arc welding (SMAW) of mild steel. Ion erosion of 300-400 nm diameter nanoparticles attached to indium substrate was performed with 2 keV, 100 {mu}m diameter, Ar{sup +} ion beam at 45 deg. ion incidence and 1 rpm sample rotation. The results show that both types of particles have core-shell morphology. A layer of fluorine, chlorine and carbon containing compounds covers stainless steel welding fume particles. The cores of these particles are enriched in iron, manganese and chromium. Outer shell of mild steel welding fume particles is enriched in carbon, potassium, chlorine and fluorine, while the deeper layers of these nanoparticles are richer in main steel components.

Induction of autocrine factor inhibiting cell motility from murine B16-BL6 melanoma cells by alpha-melanocyte stimulating hormone.

Science.gov (United States)

Murata, J; Ayukawa, K; Ogasawara, M; Watanabe, H; Saiki, I

1999-03-15

We have previously reported that neuropeptide alpha-melanocyte stimulating hormone (alpha-MSH) successfully inhibited Matrigel invasion and haptotactic migration of B16-BL6 melanoma cells towards both fibronectin and laminin without affecting their growth. In the present study, we investigated the inhibitory mechanism of tumor cell motility by alpha-MSH. Alpha-MSH significantly blocked the autocrine motility factor (AMF)-enhanced cell motility. However, alpha-MSH did neither prevent the secretion of AMF from B16-BL6 cells nor alter the expression level of AMF receptor (gp78). On the other hand, alpha-MSH induced the secretion of the motility inhibitory factor(s) from B16-BL6 cells in a concentration- and time-dependent manner. The induction of the motility inhibitor(s) was proportional to increasing levels of intracellular cAMP induced by alpha-MSH as well as forskolin, and the activity was abolished by an adenylate cyclase inhibitor, 2',5'-dideoxyadenosine (DDA). The motility-inhibiting activity in conditioned medium (CM) from alpha-MSH-treated B16-BL6 cells was found to have a m.w. below 3 kDa after fractionation. This activity was abolished by boiling but insensitive to trypsin. The treatment of tumor cells with cycloheximide reduced the activity in alpha-MSH-stimulated CM. Our results suggest that alpha-MSH inhibited the motility of B16-BL6 cells through induction of autocrine factor(s).

The behavior of radioactive 137Cs and stable Cs at the isolated undisturbed mountain pond in Fukui, Japan

International Nuclear Information System (INIS)

Iwamoto, Kazumi; Kimura, Makio; Ando, Kenji; Amano, Hikaru

2003-01-01

The behavior of radioactive 137 Cs and stable Cs at the isolated undisturbed mountain pond in Fukui, Japan was studied for the pond water, the sedimentary grains and the soil near the pond. The concentrations of 137 Cs and stable Cs in the pond water ranged from 0.23 to 0.85 Bq/m 3 and from 0.005 to 0.018 mg/m 3 , respectively. The sedimentary grains were sorted by sieving into fractions with diameter from 2 mm to less than 38 μm. The concentrations of 137 Cs and stable Cs in the sorted grains were measured, and those of the adsorbed state were determined by subtracting the concentration of the grain matrix. The adsorbed concentrations increased with decrease in particle diameter and depended less on the kind of samples. The in-situ distribution coefficient Kd depended largely on particle diameter and increased with the decrease in diameter. The values of Kd ranged from about 20 to 1200 m 3 /kg for stable Cs and about 15 to 1000 m 3 /kg for 137 Cs, and the Kd of 137 Cs seemed to be slightly smaller than that of stable Cs. The concentration of stable Cs in the sedimentary mud was found to be close to that of the fine grains. The concentrations of stable Cs in the soil near the pond was about 7.7 mg/kg, and that of 137 Cs was about 0.6 kBq/kg for the surface layer soil and decreased with increase in soil depth. (author)

Strontium-90 and cesium-137 in soil (from July 1979 to Oct. 1980)

International Nuclear Information System (INIS)

1980-01-01

The samples of soil were collected from the locations in spacious and flat areas without past disturbance on the surfaces. The samples were taken from two layers of different depth, 0 - 5 cm and 5 - 20 cm. In the course of air drying, lumps were crushed by hand, and plant roots, pebbles and small gravels were removed. The air-dried soils were sieved, and heated in the presence of Sr and Cs carriers together with sodium hydroxide. Then the samples were heated with hydrochloric acid, and Sr-90 and Cs-137 were separated from the sample solutions by the methods described. Their activities were counted with low background beta counters. The net rate of sample counting was corrected for the counter efficiency, recovery, self-absorption and decay. As the environmental data, the results of Sr-90 and Cs-137 in soil obtained from July, 1979, to October, 1980, and the locations of sampling are given. In a table, the months, locations and depth (cm) of sampling, air soil (%), Sr(%), and the amounts of Sr-90 and Cs-137 (pCi/kg, mCi/km 2 ) are shown. The maximum values are 120 mCi/km 2 of Sr-90 and 260 mCi/km 2 of Cs-137 found in Kawabe County, Akita Prefecture, in July, 1980. (Kako, I.)

In vivo effects of chronic contamination with 137 cesium on testicular and adrenal steroidogenesis

International Nuclear Information System (INIS)

Grignard, Elise; Gueguen, Yann; Grison, Stephane; Gourmelon, Patrick; Souidi, Maamar; Lobaccaro, Jean-Marc A.

2008-01-01

More than 20 years after Chernobyl nuclear power plant explosion, radionuclids are still mainly bound to the organic soil layers. The radiation exposure is dominated by the external exposure to gamma-radiation following the decay of 137 Cs and by soil-to-plant-to-human transfer of 137 Cs into the food chain. Because of this persistence of contamination with 137 Cs, questions regarding public health for people living in contaminated areas were raised. We investigated the biological effects of chronic exposure to 137 Cs on testicular and adrenal steroidogenesis metabolisms in rat. Animals were exposed to radionuclide in their drinking water for 9 months at a dose of 6,500 Bq/l (610 Bq/kg/day). Cesium contamination decreases the level of circulating 17β-estradiol, and increases corticosterone level. In testis, several nuclear receptors messenger expression is disrupted; levels of mRNA encoding Liver X receptor α (LXRα) and LXRβ are increased, whereas farnesoid X receptor mRNA presents a lower level. Adrenal metabolism presents a paradoxical decrease in cyp11a1 gene expression. In conclusion, our results show for the first time molecular and hormonal modifications in testicular and adrenal steroidogenic metabolism, induced by chronic contamination with low doses of 137 Cs. (orig.)

In vivo effects of chronic contamination with 137 cesium on testicular and adrenal steroidogenesis

Energy Technology Data Exchange (ETDEWEB)

Grignard, Elise; Gueguen, Yann; Grison, Stephane; Gourmelon, Patrick; Souidi, Maamar [Institute for Radiological Protection and Nuclear Safety, Radiological Protection and Human Health Division, Radiobiology and Epidemiology Department, Laboratory of Experimental Toxicology, BP no 17, Fontenay-aux-Roses Cedex (France); Lobaccaro, Jean-Marc A. [UMR Universite Blaise Pascal-CNRS 6547, Physiologie Comparee et Endocrinologie Moleculaire, Centre de Recherche en Nutrition Humaine d' Auvergne, Aubiere Cedex (France)

2008-09-15

More than 20 years after Chernobyl nuclear power plant explosion, radionuclids are still mainly bound to the organic soil layers. The radiation exposure is dominated by the external exposure to gamma-radiation following the decay of {sup 137}Cs and by soil-to-plant-to-human transfer of {sup 137}Cs into the food chain. Because of this persistence of contamination with {sup 137}Cs, questions regarding public health for people living in contaminated areas were raised. We investigated the biological effects of chronic exposure to {sup 137}Cs on testicular and adrenal steroidogenesis metabolisms in rat. Animals were exposed to radionuclide in their drinking water for 9 months at a dose of 6,500 Bq/l (610 Bq/kg/day). Cesium contamination decreases the level of circulating 17{beta}-estradiol, and increases corticosterone level. In testis, several nuclear receptors messenger expression is disrupted; levels of mRNA encoding Liver X receptor {alpha} (LXR{alpha}) and LXR{beta} are increased, whereas farnesoid X receptor mRNA presents a lower level. Adrenal metabolism presents a paradoxical decrease in cyp11a1 gene expression. In conclusion, our results show for the first time molecular and hormonal modifications in testicular and adrenal steroidogenic metabolism, induced by chronic contamination with low doses of {sup 137}Cs. (orig.)

Assesment of soil erosion by 137Cs technique in native forests in Londrina City, Parana, Brazil

Directory of Open Access Journals (Sweden)

Avacir Casanova Andrello

2007-11-01

Full Text Available The aim of this work was to assess the soil erosion process in native forest by the 137Cs methodology. The mass balance model was applied to assess the rates of soil loss in three native forests around of Londrina city, Paraná, Brazil. 137Cs distribution depth was of exponential type for the three forests and 137Cs inventory was 241 Bq m-2 for Mata 1, 338 Bq m-2 for Mata 2 and 325 Bq m-2 for Mata UEL. The soil loss value calculated for three native forests was: 6,684 kg ha-1 yr-1 for Mata 1, 1,788 kg ha-1 yr-1 for Mata 2 and 4,524 kg ha-1 yr-1 for Mata UEL.O processo de erosão de solo em floresta nativa tem sido pouco investigado. Como a metodologia do césio-137 dá resultados tanto de taxas de erosão de solo como a bioturbação no perfil de solo, ele tem sido usado para avaliar o processo de erosão de solo nestes ecossistemas. O modelo de balanço de massa foi aplicado para avaliar as taxas de perdas de solo em três florestas nativas na região de Londrina, Paraná, Brasil. A distribuição em profundidade do césio-137 para as três florestas é do tipo exponencial. O inventário de césio-137 foi de 241 Bq m-2 para Mata 1, 338 Bq m-2 para Mata 2 e 325 Bq m-2 para Mata UEL.O valor de perda de solo calculado para Mata 1 foi 6,684 kg ha-1 yr-1, 1,788 kg ha-1 yr-1 para Mata 2 e 4,524 kg ha-1 yr-1 para Mata UEL.

Investigation of the cosmetic ingredient distribution in the stratum corneum using NanoSIMS imaging

International Nuclear Information System (INIS)

Tanji, N.; Okamoto, M.; Katayama, Y.; Hosokawa, M.; Takahata, N.; Sano, Y.

2008-01-01

In order to understand the mechanisms of action of cosmetic ingredients, it is important to establish the distribution of the component agents within the epidermis of the skin. To date, time-of-flight secondary ion mass spectrometry (TOF-SIMS) has been used to detect cosmetic ingredients in the skin. However, it is technically difficult to investigate the distribution of the agents in the stratum corneum using TOF-SIMS. Therefore, an analytical method with higher spatial resolution is required. In this study, we investigated an imaging analysis technique based on NanoSIMS to detect cosmetic ingredients in the skin. Pig skin was used as a model for human skin. The sample was treated with a cosmetic formulation containing 15 N-labelled pseudo-ceramide (SLE). The sample was frozen with liquid nitrogen and cross-sections were cut using a cryomicrotome. As a result, the fine layer structure of the corneocytes was clearly observed by using NanoSIMS. Our studies indicate that SLE penetrates into the stratum corneum via an intercellular route. We conclude that application of NanoSIMS analysis can contribute to a better understanding of the function of cosmetic ingredients in the skin.

Temporal reduction of the external gamma dose rate due to 137Cs mobility in sandy beaches

International Nuclear Information System (INIS)

Rizzotto, M.; Toso, J.; Velasco, H.; Belli, M.; Sansone, U.

2009-01-01

In the present paper the contribution to the external gamma dose rate due o 137 Cs in soil as a function of time is presented. Sampling sites were elected along the Calabria and Basilicata Regions coastal beaches (southern art of Italy) to assess the external gamma dose rate in air, 1 m above the round level. A convection-dispersion model, with constant parameters was sed to approximate the radiocesium soil vertical migration. The model was calibrated using the initial 137 Cs activity deposition in this region Chernobyl fallout) and 137 Cs activity concentration down the soil profile, measured 10 years later. The dispersion coefficient and the advection velocity values, were respectively: 2.17 cm 2 y -1 and 0.32 cm -1 . The Radionuclide Software Package (RSP), which uses a Monte Carlo simulation code, was used to determine the primary 137 Cs gamma dose contribution in air 1 m above the ground surface. The resulting 137 Cs external dose rate ranged from 0.42 nGy h -1 in 1986, to 0.05 nGy h -1 in 007. (author)

Simulation of multi-photon emission isotopes using time-resolved SimSET multiple photon history generator

Energy Technology Data Exchange (ETDEWEB)

Chiang, Chih-Chieh; Lin, Hsin-Hon; Lin, Chang-Shiun; Chuang, Keh-Shih [Department of Biomedical Engineering and Environmental Sciences, National Tsing-HuaUniversity, Hsinchu, Taiwan (China); Jan, Meei-Ling [Health Physics Division, Institute of Nuclear Energy Research, Atomic Energy Council, Taoyuan, Taiwan (China)

2015-07-01

Abstract-Multiple-photon emitters, such as In-111 or Se-75, have enormous potential in the field of nuclear medicine imaging. For example, Se-75 can be used to investigate the bile acid malabsorption and measure the bile acid pool loss. The simulation system for emission tomography (SimSET) is a well-known Monte Carlo simulation (MCS) code in nuclear medicine for its high computational efficiency. However, current SimSET cannot simulate these isotopes due to the lack of modeling of complex decay scheme and the time-dependent decay process. To extend the versatility of SimSET for simulation of those multi-photon emission isotopes, a time-resolved multiple photon history generator based on SimSET codes is developed in present study. For developing the time-resolved SimSET (trSimSET) with radionuclide decay process, the new MCS model introduce new features, including decay time information and photon time-of-flight information, into this new code. The half-life of energy states were tabulated from the Evaluated Nuclear Structure Data File (ENSDF) database. The MCS results indicate that the overall percent difference is less than 8.5% for all simulation trials as compared to GATE. To sum up, we demonstrated that time-resolved SimSET multiple photon history generator can have comparable accuracy with GATE and keeping better computational efficiency. The new MCS code is very useful to study the multi-photon imaging of novel isotopes that needs the simulation of lifetime and the time-of-fight measurements. (authors)

A comparative study of carbocyanine dyes measured with TOF-SIMS and other mass spectrometric techniques

International Nuclear Information System (INIS)

Adriaensen, L.; Vangaever, F.; Gijbels, R.

2004-01-01

A series of cationic, zwitterionic and anionic carbocyanine dyes have been measured with TOF-SIMS under Ga + bombardment. In contrast to the cationic dyes, which give very intense molecular ion and characteristic fragment signals in the positive mode, the anionic dyes produce only a few fragment signals of low intensity. Even in the negative mode no molecular ions of the anionic dyes are seen in the recorded spectra. Actually, none of the studied molecules produces negative SIMS spectra containing molecular information. A comparative study was made between TOF-SIMS and other mass spectrometric techniques, namely, fast atom bombardment (FAB), electro spray ionization (ESI) and matrix assisted laser desorption ionization (MALDI). The measurements show that MALDI, ESI as well as FAB all give rise to spectra containing molecular ion signals, either in the positive, in the negative or in both modes. Unlike with TOF-SIMS, this observation also applies to the anionic dyes. Characteristic fragments of the dyes are present in all the recorded spectra. However, TOF-SIMS appears to induce more fragment ions in comparison with the other techniques. ESI, for instance, produces hardly any molecular fragments. Finally, the kind of fragment ions recorded depends upon the technique used, though some signals are produced by various techniques. For these carbocyanine dyes there is no clear correlation between the mass spectra obtained with TOF-SIMS and spectra obtained with the other techniques. This points to different desorption/ionization mechanisms, and makes it difficult, in practice, to make predictions on the feasibility of TOF-SIMS, starting from results of the other MS techniques

Social Impacts Module (SIM) Transition

Science.gov (United States)

2012-09-28

or OABs. An agent can communicate about events, seek resources, or do nothing. This basic procedure repeats itself continuously. See Appendix C for a...still contains the ability to represent key leaders and social networks and there are no changes to the procedures described for SIM 2.0 regarding...of the study question, MAJ Ja- son Whipple of WSMR trav- eled to Monterey to sup- port designing the Nexus scenario. The meeting re- sulted in

Activity concentrations of [sup 137]Cs in moose and their forage plants in mid-Sweden

Energy Technology Data Exchange (ETDEWEB)

Johanson, K.J. (Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Radioecology); Bergstroem, Roger (Swedish Hunters' Association, Uppsala (Sweden). Research Unit); Eriksson, Olof (Uppsala Univ. (Sweden). Dept. of Ecological Botany); Erixon, Allan (Hunters' Association of Vaesternorrland, Haernoesand (Sweden))

1994-01-01

The [sup 137]s activity concentrations in moose and their principal fodder plants as well as the botanical composition of the rumen content in moose were studied in three areas of the county of Vaesternorrland in Sweden. The mean [sup 137]Cs activity concentration in moose muscle samples from the three areas with a ground deposition from 20 to 60 kBq m[sup -2] varied between 540 and 915 Bq kg[sup -1]. During the period July to October, three plant species - fireweed, birch and bilberry - constitute more than 70% of the rumen content. Estimation of the daily [sup 137]Cs intake was performed based on the botanical analysis of rumen content and the [sup 137]Cs activity concentrations found in samples of fodder plants. A mean F[sub f] of 0.19 day kg[sup -1] was calculated. A mean aggregated transfer factor of 0.016 m[sup 2] kg[sup -1] was found for the three areas. (author).

Chronic effects of cesium-137 ingestion on physiological systems in rat

International Nuclear Information System (INIS)

Voisin, Philippe; Grignard, Elise; Souidi, Maamar; Gueguen, Yann; Lestaevel, Philippe; Grandcolas, Line; Grison, Stephane; Dublineau, Isabelle; Gourmelon, Patrick

2008-01-01

Full text: The post-Chernobyl contamination by cesium-137 is of particular concern for public health. Several diseases have been reported in populations living in contaminated territories, such as behavior disorders, anxiety symptoms, cardiovascular diseases, perturbations of endocrine and reproductive status, immunity disturbances. The objective of this study was to determine in a rat model the effects of 137 Cs contamination by ingestion of post-accidental dose (6500 Bq/L) on several physiological systems, central nervous system, cardiovascular system, steroidogenesis, intestinal functions, and metabolism of cholesterol and of vitamin D. The animals were chronically and sub chronically contaminated via drinking water (∼150Bq per day). These experiments demonstrated that chronic ingestion of 137 Cs induced modifications of these physiological systems. A decrease in blood pressure was observed in contaminated animals. At the same time, changes in cardiac function were evidenced via increased plasma levels of CK and CK-MB and variations in gene expression of proteins involved in vascular tonus and of K + channels in cardiac left ventricle. Vitamin D metabolism was also modified by 137 Cs with a diminution of plasma level of Vitamin D (1,25(OH)D3), and changes in mRNA levels of cytochrome P450 CYP27B1 and CYP2R1 in brain and liver. Concerning cholesterol metabolism, no changes in plasma lipid levels were noted, although increased gene expression of liver X receptor α (LXRα), low-density lipoprotein receptor (LDLr) and apolipoprotein B (ApoB). In addition, steroidogenesis seemed to be modified, since decreased plasma level of 17β-estradiol and increased corticosterone plasma level were observed following chronic 137 Cs ingestion. These changes were associated with modification of mRNA levels of nuclear receptors in testis and of cytochrome P450 CYP11a1 in adrenal. Evaluation of intestine function demonstrated few effects of 137 Cs after chronic ingestion, except

High-resolution esophageal pressure topography for esophageal motility disorders

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Hashem Fakhre Yaseri

2016-04-01

Full Text Available Background: High-resolution manometer (HRM of the esophagus has become the main diagnostic test in the evaluation of esophageal motility disorders. The development of high-resolution manometry catheters and software displays of manometry recordings in color-coded pressure plots have changed the diagnostic assessment of esophageal disease. The first step of the Chicago classification described abnormal esophagogastric junction deglutitive relaxation. The latest classification system, proposed by Pandolfino et al, includes contraction patterns and peristalsis integrity based on integrated relaxation pressure 4 (IRP4. It can be discriminating the achalasia from non-achalasia esophageal motility disorders. The aim of this study was to assessment of clinical findings in non-achalasia esophageal motility disorders based on the most recent Chicago classification. Methods: We conducted a prospective cross-sectional study of 963 patients that had been referred to manometry department of Gastrointestinal and Liver Research Center, Firozgar Hospital, Tehran, Iran, from April, 2012 to April, 2015. They had upper GI disorder (Dysphasia, non-cardiac chest pain, regurgitation, heartburn, vomiting and asthma and weight loss. Data were collected from clinical examinations as well as patient questionnaires. Manometry, water-perfused, was done for all patients. Manometry criteria of the patients who had integrated relaxation pressure 4 (IRP4 ≤ 15 mmHg were studied. Results: Our finding showed that the non-achalasia esophageal motility disorders (58% was more common than the achalasia (18.2%. Heartburn (68.5%, regurgitation (65.4% and non-cardiac chest pain (60.6% were the most common clinical symptoms. Although, vomiting (91.7% and weight loss (63% were the most common symptoms in referring patients but did not discriminate this disorders from each other’s. Borderline motor function (67.2% was the most common, absent peristalsis (97% and the hyper

Cellular Scale Anisotropic Topography Guides Schwann Cell Motility

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Mitchel, Jennifer A.; Hoffman-Kim, Diane

2011-01-01

Directed migration of Schwann cells (SC) is critical for development and repair of the peripheral nervous system. Understanding aspects of motility specific to SC, along with SC response to engineered biomaterials, may inform strategies to enhance nerve regeneration. Rat SC were cultured on laminin-coated microgrooved poly(dimethyl siloxane) platforms that were flat or presented repeating cellular scale anisotropic topographical cues, 30 or 60 µm in width, and observed with timelapse microscopy. SC motion was directed parallel to the long axis of the topography on both the groove floor and the plateau, with accompanying differences in velocity and directional persistence in comparison to SC motion on flat substrates. In addition, feature dimension affected SC morphology, alignment, and directional persistence. Plateaus and groove floors presented distinct cues which promoted differential motility and variable interaction with the topographical features. SC on the plateau surfaces tended to have persistent interactions with the edge topography, while SC on the groove floors tended to have infrequent contact with the corners and walls. Our observations suggest the capacity of SC to be guided without continuous contact with a topographical cue. SC exhibited a range of distinct motile morphologies, characterized by their symmetry and number of extensions. Across all conditions, SC with a single extension traveled significantly faster than cells with more or no extensions. We conclude that SC motility is complex, where persistent motion requires cellular asymmetry, and that anisotropic topography with cellular scale features can direct SC motility. PMID:21949703

Visualizing Microbial Biogeochemistry: NanoSIMS and Stable Isotope Probing (Invited)

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Pett-Ridge, J.; Weber, P. K.

2009-12-01

Linking phylogenetic information to function in microbial communities is a key challenge for microbial ecology. Isotope-labeling experiments provide a useful means to investigate the ecophysiology of microbial populations and cells in the environment and allow measurement of nutrient transfers between cell types, symbionts and consortia. The combination of Nano-Secondary Ion Mass Spectrometry (NanoSIMS) analysis, in situ labeling and high resolution microscopy allows isotopic analysis to be linked to phylogeny and morphology and holds great promise for fine-scale studies of microbial systems. In NanoSIMS analysis, samples are sputtered with an energetic primary beam (Cs+, O-) liberating secondary ions that are separated by the mass spectrometer and detected in a suite of electron multipliers. Five isotopic species may be analyzed concurrently with spatial resolution as fine as 50nm. A high sensitivity isotope ratio ‘map’ can then be generated for the analyzed area. NanoSIMS images of 13C, 15N and Mo (a nitrogenase co-factor) localization in diazotrophic cyanobacteria show how cells differentially allocate resources within filaments and allow calculation of nutrient uptake rates on a cell by cell basis. Images of AM fungal hyphae-root and cyanobacteria-rhizobia associations indicate the mobilization and sharing (stealing?) of newly fixed C and N. In a related technique, “El-FISH”, stable isotope labeled biomass is probed with oligonucleotide-elemental labels and then imaged by NanoSIMS. In microbial consortia and cyanobacterial mats, this technique helps link microbial structure and function simultaneously even in systems with unknown and uncultivated microbes. Finally, the combination of re-engineered universal 16S oligonucleotide microarrays with NanoSIMS analyses may allow microbial identity to be linked to functional roles in complex systems such as mats and cellulose degrading hindgut communities. These newly developed methods provide correlated

Cell motility as persistent random motion: Theories from experiments

DEFF Research Database (Denmark)

Selmeczi, D.; Mosler, S.; Hagedorn, P.H.

2005-01-01

Experimental time series for trajectories of motile cells may contain so much information that a systematic analysis will yield cell-type- specific motility models. Here we demonstrate how, using human keratinocytes and fibroblasts as examples. The two resulting models reflect the cells' differen...

137CS-determination in game meat from some hunting areas in lower Austria

International Nuclear Information System (INIS)

Ayromlou, S.; Tataruch, F.

2001-01-01

In 1986, the contamination of some regions in Austria by 137 Cs, due to the Chernobyl accident was relatively high. Among other 137 Cs is taken up by people by the consumption of game. In an area of Lower Austria which is relatively heavily contaminated by Chernobyl fallout since 1986 the 137 Cs-contamination of meat of game-animals was measured every year. Clear differences arose in the load of the single game species whose causes just like the temporal changes are discussed. The highest 137 Cs activity concentration was with 5243 Bq/kg measured on a wild boar. With this activity concentration an annual effective dose of only 0,06 mSv can be estimated for an annual average consumption of one kilogram meat of wild boar. (orig.) [de

Inventories of fallout {sup 21}Pb and {sup 137}Cs radionuclides in moorland and woodland soils around Edinburgh urban area (UK)

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Likuku, A.S. [School of Physics, University of Edinburgh, James Clerk Maxwell Building, King' s Buildings, Mayfield Road, Edinburgh EH9 3JZ (United Kingdom)]. E-mail: alikuku@temo.bca.bw; Branford, D. [School of Physics, University of Edinburgh, James Clerk Maxwell Building, King' s Buildings, Mayfield Road, Edinburgh EH9 3JZ (United Kingdom); Fowler, D. [Centre for Ecology and Hydrology, Edinburgh, Bush Estate, Penicuik, Midlothian EH26 0QB (United Kingdom); Weston, K.J. [School of GeoSciences, University of Edinburgh, James Clerk Maxwell Building, King' s Buildings, Mayfield Road, Edinburgh EH9 3JZ (United Kingdom)

2006-07-01

Inventories of fallout {sup 21}Pb and {sup 137}Cs have been measured in moorland and woodland soils around the Edinburgh urban area, using a high purity germanium detector. The {sup 21}Pb inventories in moorland soils were relatively uniform, with a mean value of 2520 {+-} 270 Bq m{sup -2}. The mean {sup 137}Cs inventory in moorland soils varied greatly from 1310 to 2100 Bq m{sup -2}, with a mean value of 1580 {+-} 310 Bq m{sup -2}. The variability was ascribed mainly to the non-uniform distribution of fallout Chernobyl {sup 137}Cs. The mean {sup 21}Pb and {sup 137}Cs inventories in woodland canopy soils were found to be 3630 {+-} 380 Bq m{sup -2} and 2510 {+-} 510 Bq m{sup -2}, respectively. At sites for which both moorland and woodland data were available, the mean inventories provided fairly similar average enhancements of (47 {+-} 7)% and (46 {+-} 18)% of {sup 21}Pb and {sup 137}Cs under woodland canopy soils relative to open grassland soils, respectively. The enhancement factors are broadly in line with other independent findings in literature. Enhancement of both {sup 21}Pb and {sup 137}Cs in woodland soils relative to moorland soils is, in part, due to deposition by impaction during air turbulence, wash-off, gravitational settling and deposition during leaf senescence. Results of this study suggest that these processes affect both {sup 21}Pb and {sup 137}Cs carrier aerosols in a similar way.

7 CFR 4279.137 - Financial statements.

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