The return of the Iberian lynx to Portugal: local voices.

Science.gov (United States)

Lopes-Fernandes, Margarida; Espírito-Santo, Clara; Frazão-Moreira, Amélia

2018-01-11

Ethnographic research can help to establish dialog between conservationists and local people in reintroduction areas. Considering that predator reintroductions may cause local resistance, we assessed attitudes of different key actor profiles to the return of the Iberian lynx (Lynx pardinus) to Portugal before reintroduction started in 2015. We aimed to characterize a social context from an ethnoecological perspective, including factors such as local knowledge, perceptions, emotions, and opinions. We conducted semi-structured interviews (n = 131) in three different protected areas and observed practices and public meetings in order to describe reintroduction contestation, emotional involvement with the species, and local perceptions about conservation. Detailed content data analysis was undertaken and an open-ended codification of citations was performed with the support of ATLAS.ti. Besides the qualitative analyses, we further explored statistic associations between knowledge and opinions and compared different geographical areas and hunters with non-hunters among key actors. Local ecological knowledge encompassed the lynx but was not shared by the whole community. Both similarities and differences between local and scientific knowledge about the lynx were found. The discrepancies with scientific findings were not necessarily a predictor of negative attitudes towards reintroduction. Contestation issues around reintroduction differ between geographical areas but did not hinder an emotional attachment to the species and its identification as a territory emblem. Among local voices, financial compensation was significantly associated to hunters and nature tourism was cited the most frequent advantage of lynx presence. Materialistic discourses existed in parallel with non-economic factors and the existence of moral agreement with its protection. The considerable criticism and reference to restrictions by local actors concerning protected areas and conservation

Status and distribution of the lynx in the German Alps

Directory of Open Access Journals (Sweden)

Petra Kaczensky

1998-09-01

Full Text Available Abstract The lynx (Lynx lynx had been eradicated in the German Alps by the middle of the 19th century. Since the early 1970s there have been several attempts to initiate the re-introduction of lynx into the German Alps, but none of the projects could be carried out because of the still very controversial attitudes towards the species, and because of competition between institutions. Natural re-colonization of the German Alps by lynx can be expected sooner or later from Switzerland or Austria. Although lynx are already present in some parts of Germany outside the Alps, neither an organized monitoring system nor compensation regulations for losses of livestock exist. For a successful comeback of lynx into Germany, including the German Alps, more efforts than a year-round protection by the federal hunting law is needed. Initiative management actions and intensive public education are necessary to obtain and secure public acceptance of the lynx.

Foraging sites of Eurasian lynx Lynx lynx: relative importance of microhabitat and prey occurrence

Czech Academy of Sciences Publication Activity Database

Belotti, E.; Červený, J.; Šustr, Pavel; Kreisinger, Jakub; Gaibani, G.; Bufka, L.

2013-01-01

Roč. 19, č. 2 (2013), s. 188-201 ISSN 0909-6396 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:68081766 ; RVO:67179843 Keywords : Eurasian Lynx * microhabitat * red deer * roe deer * stalking cover * predation Subject RIV: EH - Ecology, Behaviour Impact factor: 1.071, year: 2013

Ancient DNA reveals past existence of Eurasian lynx in Spain

DEFF Research Database (Denmark)

Rodríguez-Varela, R.; García, N.; Nores, C.

2016-01-01

. The paleontological record and our data indicate a population replacement of the Iberian lynx by the Eurasian lynx during the Pleistocene/Holocene transition in the Cantabrian cornice of Spain. Phylogeographic patterns of Late Pleistocene and Holocene Eurasian lynx from Iberia, France, Italy and Denmark show...

Lynx web services for annotations and systems analysis of multi-gene disorders.

Science.gov (United States)

Sulakhe, Dinanath; Taylor, Andrew; Balasubramanian, Sandhya; Feng, Bo; Xie, Bingqing; Börnigen, Daniela; Dave, Utpal J; Foster, Ian T; Gilliam, T Conrad; Maltsev, Natalia

2014-07-01

Lynx is a web-based integrated systems biology platform that supports annotation and analysis of experimental data and generation of weighted hypotheses on molecular mechanisms contributing to human phenotypes and disorders of interest. Lynx has integrated multiple classes of biomedical data (genomic, proteomic, pathways, phenotypic, toxicogenomic, contextual and others) from various public databases as well as manually curated data from our group and collaborators (LynxKB). Lynx provides tools for gene list enrichment analysis using multiple functional annotations and network-based gene prioritization. Lynx provides access to the integrated database and the analytical tools via REST based Web Services (http://lynx.ci.uchicago.edu/webservices.html). This comprises data retrieval services for specific functional annotations, services to search across the complete LynxKB (powered by Lucene), and services to access the analytical tools built within the Lynx platform. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

Performance analysis and kernel size study of the Lynx real-time operating system

Science.gov (United States)

Liu, Yuan-Kwei; Gibson, James S.; Fernquist, Alan R.

1993-01-01

This paper analyzes the Lynx real-time operating system (LynxOS), which has been selected as the operating system for the Space Station Freedom Data Management System (DMS). The features of LynxOS are compared to other Unix-based operating system (OS). The tools for measuring the performance of LynxOS, which include a high-speed digital timer/counter board, a device driver program, and an application program, are analyzed. The timings for interrupt response, process creation and deletion, threads, semaphores, shared memory, and signals are measured. The memory size of the DMS Embedded Data Processor (EDP) is limited. Besides, virtual memory is not suitable for real-time applications because page swap timing may not be deterministic. Therefore, the DMS software, including LynxOS, has to fit in the main memory of an EDP. To reduce the LynxOS kernel size, the following steps are taken: analyzing the factors that influence the kernel size; identifying the modules of LynxOS that may not be needed in an EDP; adjusting the system parameters of LynxOS; reconfiguring the device drivers used in the LynxOS; and analyzing the symbol table. The reductions in kernel disk size, kernel memory size and total kernel size reduction from each step mentioned above are listed and analyzed.

Influence of tourism and traffic on the Eurasian lynx hunting activity and daily movements

Directory of Open Access Journals (Sweden)

Belotti, E.

2012-01-01

Full Text Available Human presence influences survival of large carnivores in several ways and even outdoor activities can be a source of disturbance. As ungulate prey provide the Eurasian lynx (Lynx lynx with food for several nights and the pattern of lynx activity is mainly shaped by searching for and consuming large prey, the need to move decreases strongly while the prey is eaten. However, during the day, human activity may drive lynx to move to safe shelters and habitat features such as dense vegetation may increase tolerance. In the Bohemian Forest (Czech Republic, we found 116 prey killed by five GPS–collared lynxes. We tested whether the kill sites were located farther from roads or tourist trails than a set of randomly generated locations and whether presence of roads or tourist trails and habitat structure influenced the distance ‘kill site to daytime resting sites’. At night, with low human activity, lynxes did not avoid roads and even selected the surroundings of tourist trails. The distance ‘kill site to daytime resting sites’ correlated negatively with presence of habitat concealment and distance to tourist trails, suggesting that outdoor activities may have to be considered in lynx management plans.

Missing lynx and trophic cascades in food webs: A reply to Ripple et al.

Science.gov (United States)

John R. Squires; Nicholas J. DeCesare; Mark Hebblewhite; Joel Berger

2012-01-01

Ripple et al. (2011) proposed a hypothesis that the recovery of gray wolves (Canis lupus) may positively affect the viability of threatened Canada lynx (Lynx canadensis) populations in the contiguous United States through indirect species interactions. Ripple et al. (2011) proposed 2 key trophic linkages connecting wolf restoration with lynx recovery. First, recovering...

UnLynx: A Decentralized System for Privacy-Conscious Data Sharing

Directory of Open Access Journals (Sweden)

Froelicher David

2017-10-01

Full Text Available Current solutions for privacy-preserving data sharing among multiple parties either depend on a centralized authority that must be trusted and provides only weakest-link security (e.g., the entity that manages private/secret cryptographic keys, or leverage on decentralized but impractical approaches (e.g., secure multi-party computation. When the data to be shared are of a sensitive nature and the number of data providers is high, these solutions are not appropriate. Therefore, we present UnLynx, a new decentralized system for efficient privacy-preserving data sharing. We consider m servers that constitute a collective authority whose goal is to verifiably compute on data sent from n data providers. UnLynx guarantees the confidentiality, unlinkability between data providers and their data, privacy of the end result and the correctness of computations by the servers. Furthermore, to support differentially private queries, UnLynx can collectively add noise under encryption. All of this is achieved through a combination of a set of new distributed and secure protocols that are based on homomorphic cryptography, verifiable shuffling and zero-knowledge proofs. UnLynx is highly parallelizable and modular by design as it enables multiple security/privacy vs. runtime tradeoffs. Our evaluation shows that UnLynx can execute a secure survey on 400,000 personal data records containing 5 encrypted attributes, distributed over 20 independent databases, for a total of 2,000,000 ciphertexts, in 24 minutes.

Ecology and conservation of lynx in the United States [Preface

Science.gov (United States)

Leonard F. Ruggiero

2000-01-01

When we began the task of elucidating the scientific basis for lynx conservation in June 1998, I had little idea how constrained our time would be. The request to do this job came from a consortium of federal land management agencies in response to the U.S. Fish and Wildlife Service’s "proposed rule" to list the Canada lynx as a threatened or endangered...

Lynx1 and Aβ1-42 bind competitively to multiple nicotinic acetylcholine receptor subtypes

DEFF Research Database (Denmark)

Thomsen, Morten S; Arvaniti, Maria; Jensen, Majbrit M

2016-01-01

Lynx1 regulates synaptic plasticity in the brain by regulating nicotinic acetylcholine receptors (nAChRs). It is not known to which extent Lynx1 can bind to endogenous nAChR subunits in the brain or how this interaction is affected by Alzheimer's disease pathology. We apply affinity purification....... Incubation with Ws-Lynx1 decreases nicotine-mediated extracellular signal-regulated kinase phosphorylation in PC12 cells and striatal neurons, indicating that binding of Ws-Lynx1 is sufficient to inhibit signaling downstream of nAChRs. The effect of nicotine in PC12 cells is independent of α7 or α4β2 n...

Assessing the suitability of central European landscapes for the reintroduction of Eurasian lynx

Czech Academy of Sciences Publication Activity Database

Schadt, S.; Revilla, E.; Wiegand, T.; Knauer, F.; Kaczensky, P.; Breitenmoser, U.; Bufka, L.; Červený, Jaroslav; Koubek, Petr; Huber, T.; Staniša, C.; Trepl, L.

2002-01-01

Roč. 39, č. 2 (2002), s. 189-203 ISSN 0021-8901 R&D Projects: GA AV ČR KSK6005114 Grant - others:Deutsche Bundesstiftung Umwelt(DE) AZ6000/596 Keywords : Lynx lynx * GIS * species reintroduction Subject RIV: EH - Ecology, Behaviour Impact factor: 2.902, year: 2002

Eurasian lynx hunting red deer: is there an influence of a winter enclosure system?

Czech Academy of Sciences Publication Activity Database

Belotti, E.; Kreisinger, Jakub; Romportl, D.; Heurich, M.; Bufka, L.

2014-01-01

Roč. 60, č. 3 (2014), s. 441-457 ISSN 1612-4642 Institutional support: RVO:68081766 Keywords : Cervus elaphus * Habitat heterogeneity * Lynx lynx * Predation probability * Prey density * Supplementary feeding Subject RIV: EG - Zoology Impact factor: 1.634, year: 2014

Fear or food ? abundance of red fox in relation to occurrence of lynx and wolf

OpenAIRE

Wikenros, Camilla; Aronsson, Malin; Liberg, Olof; Jarnemo, Anders; Hansson, Jessica; Wallgren, M?rtha; Sand, H?kan; Bergstr?m, Roger

2017-01-01

Apex predators may affect mesopredators through intraguild predation and/or supply of carrion from their prey, causing a trade-off between avoidance and attractiveness. We used wildlife triangle snow-tracking data to investigate the abundance of red fox (Vulpes vulpes) in relation to lynx (Lynx lynx) and wolf (Canis lupus) occurrence as well as land composition and vole (Microtus spp.)?density. Data from the Swedish wolf-monitoring system and VHF/GPS-collared wolves were used to study the eff...

Fear or food - abundance of red fox in relation to occurrence of lynx and wolf.

Science.gov (United States)

Wikenros, Camilla; Aronsson, Malin; Liberg, Olof; Jarnemo, Anders; Hansson, Jessica; Wallgren, Märtha; Sand, Håkan; Bergström, Roger

2017-08-22

Apex predators may affect mesopredators through intraguild predation and/or supply of carrion from their prey, causing a trade-off between avoidance and attractiveness. We used wildlife triangle snow-tracking data to investigate the abundance of red fox (Vulpes vulpes) in relation to lynx (Lynx lynx) and wolf (Canis lupus) occurrence as well as land composition and vole (Microtus spp.) density. Data from the Swedish wolf-monitoring system and VHF/GPS-collared wolves were used to study the effect of wolf pack size and time since wolf territory establishment on fox abundance. Bottom-up processes were more influential than top-down effects as the proportion of arable land was the key indicator of fox abundance at the landscape level. At this spatial scale, there was no effect of wolf abundance on fox abundance, whereas lynx abundance had a positive effect. In contrast, at the wolf territory level there was a negative effect of wolves on fox abundance when including detailed information of pack size and time since territory establishment, whereas there was no effect of lynx abundance. This study shows that different apex predator species may affect mesopredator abundance in different ways and that the results may be dependent on the spatiotemporal scale and resolution of the data.

Invertebrates outcompete vertebrate facultative scavengers in simulated lynx kills in the Bavarian Forest National Park, Germany

Directory of Open Access Journals (Sweden)

Ray, R.–R.

2014-06-01

Full Text Available Understanding the role of scavengers in ecosystems is important for species conservation and wildlife management. We used road–killed animals, 15 in summer 2003 (June–August and nine in winter 2003/2004 (from November to January, to test the following hypotheses: (1 vertebrate scavengers such as raven (Corvus corax, red fox (Vulpes vulpes and wild boar (Sus scrofa consume a higher proportion of the carcasses than invertebrates; (2 the consumption rate is higher in winter than in summer due to the scarcity of other food resources; and (3 vertebrate scavengers are effective competitors of Eurasian lynx. We monitored 65 animals belonging to eight different mammal and bird species with camera traps. Surprisingly, Eurasian lynx (Lynx lynx was the most important vertebrate scavenger. However, in both seasons, the consumption of vertebrate scavengers was of minor impact. In summer, the carcasses were completely consumed within 10 days, mostly by invertebrates. In winter, only 5% of the carcasses were consumed within 10 days and 16% within 15 days. We conclude that vertebrates in the Bavarian Forest National Park are not strong competitors for lynx.

Habitat selection and risk of predation: re-colonization by lynx had limited impact on habitat selection by roe deer.

Directory of Open Access Journals (Sweden)

Gustaf Samelius

Full Text Available Risk of predation is an evolutionary force that affects behaviors of virtually all animals. In this study, we examined how habitat selection by roe deer was affected by risk of predation by Eurasian lynx - the main predator of roe deer in Scandinavia. Specifically, we compared how habitat selection by roe deer varied (1 before and after lynx re-established in the study area and (2 in relation to habitat-specific risk of predation by lynx. All analyses were conducted at the spatial and temporal scales of home ranges and seasons. We did not find any evidence that roe deer avoided habitats in which the risk of predation by lynx was greatest and information-theoretic model selection showed that re-colonization by lynx had limited impact on habitat selection by roe deer despite lynx predation causing 65% of known mortalities after lynx re-colonized the area. Instead we found that habitat selection decreased when habitat availability increased for 2 of 5 habitat types (a pattern referred to as functional response in habitat selection. Limited impact of re-colonization by lynx on habitat selection by roe deer in this study differs from elk in North America altering both daily and seasonal patterns in habitat selection at the spatial scales of habitat patches and home ranges when wolves were reintroduced to Yellowstone National Park. Our study thus provides further evidence of the complexity by which animals respond to risk of predation and suggest that it may vary between ecosystems and predator-prey constellations.

Habitat selection and risk of predation: re-colonization by lynx had limited impact on habitat selection by roe deer.

Science.gov (United States)

Samelius, Gustaf; Andrén, Henrik; Kjellander, Petter; Liberg, Olof

2013-01-01

Risk of predation is an evolutionary force that affects behaviors of virtually all animals. In this study, we examined how habitat selection by roe deer was affected by risk of predation by Eurasian lynx - the main predator of roe deer in Scandinavia. Specifically, we compared how habitat selection by roe deer varied (1) before and after lynx re-established in the study area and (2) in relation to habitat-specific risk of predation by lynx. All analyses were conducted at the spatial and temporal scales of home ranges and seasons. We did not find any evidence that roe deer avoided habitats in which the risk of predation by lynx was greatest and information-theoretic model selection showed that re-colonization by lynx had limited impact on habitat selection by roe deer despite lynx predation causing 65% of known mortalities after lynx re-colonized the area. Instead we found that habitat selection decreased when habitat availability increased for 2 of 5 habitat types (a pattern referred to as functional response in habitat selection). Limited impact of re-colonization by lynx on habitat selection by roe deer in this study differs from elk in North America altering both daily and seasonal patterns in habitat selection at the spatial scales of habitat patches and home ranges when wolves were reintroduced to Yellowstone National Park. Our study thus provides further evidence of the complexity by which animals respond to risk of predation and suggest that it may vary between ecosystems and predator-prey constellations.

Distribution and status of lynx in the border region between Czech Republic, Germany and Austria

Czech Academy of Sciences Publication Activity Database

Wölfl, M.; Bufka, L.; Červený, Jaroslav; Koubek, Petr; Heurich, M.; Habel, H.; Huber, T.; Poost, W.

2001-01-01

Roč. 46, č. 2 (2001), s. 181-194 ISSN 0001-7051 R&D Projects: GA AV ČR IBS6093003 Institutional research plan: CEZ:AV0Z6093917 Keywords : Lynx lynx * Šumava mountains Subject RIV: EH - Ecology, Behaviour Impact factor: 0.652, year: 2001 http://acta.zbs.bialowieza.pl/contents/?art=2001-046-2-0181

LYNX community advocacy & service engagement (CASE) project final report.

Science.gov (United States)

2009-05-14

This report is a final assessment of the Community Advocacy & Service Engagement (CASE) project, a LYNX-FTA research project designed : to study transit education and public engagement methods in Central Florida. In the Orlando area, as in other part...

Nuutuuyiglu Tuttuglu (The Lynx and the Two Caribou).

Science.gov (United States)

Pope, Mary L.; And Others

This second grade elementary language text, designed for children in bilingual Inupiat-English programs in Ambler, Kobuk, Kiana, Noorvik, and Shungnak, contains a story about a lynx who tries to kill two caribou at one time but who is himself killed. Each page of text is illustrated with a black-and-white drawing. The English equivalent is given…

Expression of the Ly-6 family proteins Lynx1 and Ly6H in the rat brain is compartmentalized, cell-type specific, and developmentally regulated

DEFF Research Database (Denmark)

Thomsen, Morten Skøtt; Cinar, Betül; Jensen, Majbrit Myrup

2014-01-01

regarding the distribution and developmental regulation of these proteins in the brain. We use protein cross-linking and synaptosomal fractions to demonstrate that the Ly-6 proteins Lynx1 and Ly6H are membrane-bound proteins in the brain, which are present on the cell surface and localize to synaptic...... demonstrate that Lynx1 and Ly6H are expressed in cultured neurons, but not cultured micro- or astroglial cultures. In addition, Lynx1, but not Ly6H was detected in the CSF. Finally, we show that the Ly-6 proteins Lynx1, Lynx2, Ly6H, and PSCA, display distinct expression patterns during postnatal development...

Appendix B: Fisher, lynx, wolverine summary of distribution information

Science.gov (United States)

Mary Maj

1994-01-01

We present maps depicting distributions of fisher, lynx, and wolverine in the western United States since 1961. Comparison of past and current distributions of species can shed light on population persistence, periods of population isolation, meta-population structure, and important connecting landscapes. Information on the distribution of the American marten is not...

Ecology and conservation of lynx in the United States

Science.gov (United States)

Leonard F. Ruggiero; Keith B. Aubry; Steven W. Buskirk; Gary M. Koehler; Charles J. Krebs; Kevin S. McKelvey; John R. Squires

1999-01-01

Once found throughout the Rocky Mountains and forests of the northern states, the lynx now hides in pockets of its former range while feeding mostly on small animals like snowshoe hares. A team of government and university scientists review the newest scientific knowledge of this unique cat's history, distribution, and ecology. The chapters on this web site...

Sustainably Harvesting a Large Carnivore? Development of Eurasian Lynx Populations in Norway During 160 Years of Shifting Policy

Science.gov (United States)

Linnell, John D. C.; Broseth, Henrik; Odden, John; Nilsen, Erlend Birkeland

2010-05-01

The management of large carnivores in multiuse landscapes is always controversial, and managers need to balance a wide range of competing interests. Hunter harvest is often used to limit population size and distribution but is proving to be both controversialand technically challenging. Eurasian lynx ( Lynx lynx) are currently managed as a game species in Norway. We describe an adaptive management approach where quota setting is based on an annual census and chart the population development through the period 1996-2008, as management has become significantly more sophisticated and better informed by the increased availability of scientific data. During this period the population has been through a period of high quotas and population decline caused by fragmented management authority and overoptimistic estimates of lynx reproduction, followed by a period of recovery due to quota reductions. The modern management regime is placed in the context of shifting policy during the last 160 years, during which management goals have moved from extermination stimulated by bounties, through a short phase of protection, and now to quota-regulated harvest. Much management authority has also been delegated from central to local levels. We conclude that adaptive management has the potential to keep the population within some bounded limits, although there will inevitably be fluctuation.

Observations on the lynx Felis caracal in the Bedford district

African Journals Online (AJOL)

with, including mass and length, killing and feeding habits, breeding and litters ... van 108 eksemplare oor 'n tydperk van 3! jaar word ontleed. Verskeie ... Poison proved ineffective ... a lynx is reported the hounds are taken to the area before dawn (this is .... within a week of each other, but in each case the localities were far ...

Implications from XMM and Chandra Source Catalogs for Future Studies with Lynx

Science.gov (United States)

Ptak, Andrew

2018-01-01

Lynx will perform extremely sensitive X-ray surveys by combining very high-resolution imaging over a large field of view with a high effective area. These will include deep planned surveys and serendipitous source surveys. Here we discuss implications that can be gleaned from current Chandra and XMM-Newton serendipitous source surveys. These current surveys have discovered novel sources such as tidal disruption events, binary AGN, and ULX pulsars. In addition these surveys have detected large samples of normal galaxies, low-luminosity AGN and quasars due to the wide-area coverage of the Chandra and XMM-Newton source catalogs, allowing the evolution of these phenonema to be explored. The wide area Lynx surveys will probe down further in flux and will be coupled with very sensitive wide-area surveys such as LSST and SKA, allowing for detailed modeling of their SEDs and the discovery of rare, exotic sources and transient events.

FF-LYNX: protocol and interfaces for the control and readout of future Silicon detectors

Energy Technology Data Exchange (ETDEWEB)

Amendola, A; Bianchi, G; Fanucci, L; Saponara, S; Tongiani, C [Universita di Pisa, Dipartimento di Ingegneria dell' Informazione (DII-EIT), Via G. Caruso 16, 56122 Pisa (Italy); Castaldi, R; Minuti, M; Verdini, P G [INFN, Sezione di Pisa, Largo B. Pontecorvo 3, 56018 Pisa (Italy); Incandela, J; Magazzu, G; Rossin, R, E-mail: Guido.Magazzu@pi.infn.i [University of California at Santa Barbara (UCSB), Department of Physics, 5113 Broida Hall, CA 93106 Santa Barbara (United States)

2010-06-15

The FF-LYNX protocol provides an innovative solution for the integrated distribution of Timing, Trigger and Control signals and the data readout in future High Energy Physics experiments. Transmitter and receiver interfaces implementing the FF-LYNX protocol have been simulated with a high-level simulator and in an FPGA based emulator. The design of the interfaces in a commercial CMOS technology as radiation tolerant and low power modules is ongoing and the submission of a test circuit is foreseen in fall 2010. The key features of the protocol are described in this paper as well as its possible application for the transmission from Silicon Trackers to trigger processors with short and constant latency of data to be used for the L1 trigger generation.

Long-range gene flow and the effects of climatic and ecological factors on genetic structuring in a large, solitary carnivore: the Eurasian lynx.

Directory of Open Access Journals (Sweden)

Mirosław Ratkiewicz

Full Text Available Due to their high mobility, large terrestrial predators are potentially capable of maintaining high connectivity, and therefore low genetic differentiation among populations. However, previous molecular studies have provided contradictory findings in relation to this. To elucidate patterns of genetic structure in large carnivores, we studied the genetic variability of the Eurasian lynx, Lynx lynx throughout north-eastern Europe using microsatellite, mitochondrial DNA control region and Y chromosome-linked markers. Using SAMOVA we found analogous patterns of genetic structure based on both mtDNA and microsatellites, which coincided with a relatively little evidence for male-biased dispersal. No polymorphism for the cytochrome b and ATP6 mtDNA genes and Y chromosome-linked markers were found. Lynx inhabiting a large area encompassing Finland, the Baltic countries and western Russia formed a single genetic unit, while some marginal populations were clearly divergent from others. The existence of a migration corridor was suggested to correspond with distribution of continuous forest cover. The lowest variability (in both markers was found in lynx from Norway and Białowieża Primeval Forest (BPF, which coincided with a recent demographic bottleneck (Norway or high habitat fragmentation (BPF. The Carpathian population, being monomorphic for the control region, showed relatively high microsatellite diversity, suggesting the effect of a past bottleneck (e.g. during Last Glacial Maximum on its present genetic composition. Genetic structuring for the mtDNA control region was best explained by latitude and snow cover depth. Microsatellite structuring correlated with the lynx's main prey, especially the proportion of red deer (Cervus elaphus in its diet. Eurasian lynx are capable of maintaining panmictic populations across eastern Europe unless they are severely limited by habitat continuity or a reduction in numbers. Different correlations of mtDNA and

Relative accuracy of spatial predictive models for lynx Lynx canadensis derived using logistic regression-AIC, multiple criteria evaluation and Bayesian approaches

Directory of Open Access Journals (Sweden)

Shelley M. ALEXANDER

2009-02-01

Full Text Available We compared probability surfaces derived using one set of environmental variables in three Geographic Information Systems (GIS-based approaches: logistic regression and Akaike’s Information Criterion (AIC, Multiple Criteria Evaluation (MCE, and Bayesian Analysis (specifically Dempster-Shafer theory. We used lynx Lynx canadensis as our focal species, and developed our environment relationship model using track data collected in Banff National Park, Alberta, Canada, during winters from 1997 to 2000. The accuracy of the three spatial models were compared using a contingency table method. We determined the percentage of cases in which both presence and absence points were correctly classified (overall accuracy, the failure to predict a species where it occurred (omission error and the prediction of presence where there was absence (commission error. Our overall accuracy showed the logistic regression approach was the most accurate (74.51%. The multiple criteria evaluation was intermediate (39.22%, while the Dempster-Shafer (D-S theory model was the poorest (29.90%. However, omission and commission error tell us a different story: logistic regression had the lowest commission error, while D-S theory produced the lowest omission error. Our results provide evidence that habitat modellers should evaluate all three error measures when ascribing confidence in their model. We suggest that for our study area at least, the logistic regression model is optimal. However, where sample size is small or the species is very rare, it may also be useful to explore and/or use a more ecologically cautious modelling approach (e.g. Dempster-Shafer that would over-predict, protect more sites, and thereby minimize the risk of missing critical habitat in conservation plans[Current Zoology 55(1: 28 – 40, 2009].

First evidence of hemoplasma infection in free-ranging Namibian cheetahs (Acinonyx jubatus).

Science.gov (United States)

Krengel, Annika; Meli, Marina L; Cattori, Valentino; Wachter, Bettina; Willi, Barbara; Thalwitzer, Susanne; Melzheimer, Jörg; Hofer, Heribert; Lutz, Hans; Hofmann-Lehmann, Regina

2013-03-23

Infections with feline hemotropic mycoplasmas (hemoplasmas) have been documented in domestic cats and free-ranging feline species with high prevalences in Iberian lynxes (Lynx pardinus), Eurasian lynxes (Lynx lynx), European wildcats (Felis silvestris silvestris), African lions (Panthera leo) in Tanzania and domestic cats in South Africa. The prevalence of hemoplasmas has not yet been investigated in free-ranging felids in southern Africa. In this study we screened 73 blood samples from 61 cheetahs in central Namibia for the presence of hemoplasmas using quantitative real-time PCR. One of the cheetahs tested PCR-positive. Phylogenetic analysis based on partial sequencing of the 16S rRNA and RNAse P genes revealed that the isolate belongs to the Mycoplasma haemofelis/haemocanis group. This is the first molecular evidence of a hemoplasma infection in a free-ranging cheetah. Copyright © 2012 Elsevier B.V. All rights reserved.

Lynx: a scalable solution utilising FPGAs for high performance data processing

CSIR Research Space (South Africa)

Focke, R

2009-12-01

Full Text Available .csir.co.za 1. HDL Uses • HDL for hardware simulation only - Model 3rd party hardware - Test bench for functional verification - Read and write files - Dynamic structures • HDL for FPGA firmware (or ASIC) - Not all language features - Register transfer... Topics © CSIR 2009 www.csir.co.za A. Mentor Graphics HDL Author & Modelsim • Lynx LVDS Design © CSIR 2009 www.csir.co.za A. Mentor Graphics HDL Author • Hierarchical Graphical Design for HDL & Modelsim...

Software Development for the Kinematic Analysis of a Lynx 6 Robot Arm

OpenAIRE

Baki Koyuncu; Mehmet Güzel

2007-01-01

The kinematics of manipulators is a central problem in the automatic control of robot manipulators. Theoretical background for the analysis of the 5 Dof Lynx-6 educational Robot Arm kinematics is presented in this paper. The kinematics problem is defined as the transformation from the Cartesian space to the joint space and vice versa. The Denavit-Harbenterg (D-H) model of representation is used to model robot links and joints in this study. Both forward and inverse kinematics solutions for th...

Characterization of regionally associated feline immunodeficiency virus (FIV) in bobcats (Lynx rufus).

Science.gov (United States)

Lagana, Danielle M; Lee, Justin S; Lewis, Jesse S; Bevins, Sarah N; Carver, Scott; Sweanor, Linda L; McBride, Roy; McBride, Caleb; Crooks, Kevin R; VandeWoude, Sue

2013-07-01

Feline immunodeficiency virus (FIV) classically infects felid species with highly divergent species-specific FIVs. However, recent studies have detected an FIV strain infecting both bobcats (Lynx rufus) and pumas (Puma concolor) in California and Florida. To further investigate this observation, we evaluated FIV from bobcats in Florida (n=25) and Colorado (n=80) between 2008 and 2011. Partial viral sequences from five Florida bobcats cluster with previously published sequences from Florida panthers. We did not detect FIV in Colorado bobcats.

Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay.

Directory of Open Access Journals (Sweden)

Cheryl C Y Loh

Full Text Available Chloroquine was a cheap, extremely effective drug against Plasmodium falciparum until resistance arose. One approach to reversing resistance is the inhibition of chloroquine efflux from its site of action, the parasite digestive vacuole. Chloroquine accumulation studies have traditionally relied on radiolabelled chloroquine, which poses several challenges. There is a need for development of a safe and biologically relevant substitute. We report here a commercially-available green fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a proxy for chloroquine accumulation. This compound localized to the digestive vacuole of the parasite as observed under confocal microscopy, and inhibited growth of chloroquine-sensitive strain 3D7 more extensively than in the resistant strains 7G8 and K1. Microplate reader measurements indicated suppression of LynxTag-CQGREEN efflux after pretreatment of parasites with known reversal agents. Microsomes carrying either sensitive- or resistant-type PfCRT were assayed for uptake; resistant-type PfCRT exhibited increased accumulation of LynxTag-CQGREEN, which was suppressed by pretreatment with known chemosensitizers. Eight laboratory strains and twelve clinical isolates were sequenced for PfCRT and Pgh1 haplotypes previously reported to contribute to drug resistance, and pfmdr1 copy number and chloroquine IC50s were determined. These data were compared with LynxTag-CQGREEN uptake/fluorescence by multiple linear regression to identify genetic correlates of uptake. Uptake of the compound correlated with the logIC50 of chloroquine and, more weakly, a mutation in Pgh1, F1226Y.

[Early sibling aggression in mammals and its hormonal correlates].

Science.gov (United States)

Antonevich, A L; Naĭdenko, S V

2007-01-01

Early sibling aggression is a widespread phenomenon in birds. Ornithologists distinguish species with "obligate" and "facultative" siblicide. Sibling aggression was described in some mammal species: the domestic pig (Sus scrofa), the spotted hyena (Crocuta crocuta), the Eurasian lynx (Lynx lynx), and the Iberian lynx (L. par-dinus). In all of them, sibling aggression corresponds well with the "facultative" siblicide model in birds. Sibling aggression was observed at the age of 36-64 days in both lynx species. It is usually restricted to a single fight and can change the hierarchical structure and growth rate of the kittens. In the spotted hyena and the domestic pig, the frequency and intensity of aggressive interactions between siblings are strongest during the first days of postnatal ontogeny and then decrease gradually. The newborns of these species are much developed than newborn lynx kittens. Usually adult lynx females, in contrast to hyenas and pigs, try to stop sibling fights. This is probably related to the larger parental investment at the time of the fight in lynxes (a kitten's body weight is about 10% of the mother's) than in pigs (0.5%) and hyenas (1.9%). Sibling aggression in spotted hyenas could be related to the high level of androstenedione and is not related to testosterone concentration. In the Eurasian lynx, female sibs attack their littermates slightly more often than male sibs do, and sibling aggression is not testosterone-dependent. Hormones secreted by the adrenal glands may play an important role in this phenomenon. The data available so far, however, do not positively confirm the presence of hormonal trigger effects in mammal sibling aggression.

Antibody detection and molecular characterization of toxoplasma gondii from bobcats (Lynx rufus), domestic cats (Felis catus), and wildlife from Minnesota, USA

Science.gov (United States)

Little is known of the epidemiology of toxoplasmosis in Minnesota. In this study, we evaluated Toxoplasma gondii infection in 50 wild bobcats (Lynx rufus) and 75 other animals on/near 10 cattle farms. Antibodies to T. gondii were assayed in serum samples or tissue fluids by the modified agglutinatio...

Description and life-cycle of Taenia lynciscapreoli sp. n. (Cestoda, Cyclophyllidea)

Science.gov (United States)

Haukisalmi, Voitto; Konyaev, Sergey; Lavikainen, Antti; Isomursu, Marja; Nakao, Minoru

2016-01-01

Abstract A new species of tapeworm, Taenia lynciscapreoli sp. n. (Cestoda, Cyclophyllidea), is described from the Eurasian lynx (Lynx lynx), the main definitive host, and the roe deer (Capreolus capreolus and Capreolus pygargus), the main intermediate hosts, from Finland and Russia (Siberia and the Russian Far East). The new species was found once also in the wolf (Canis lupus) and the Eurasian elk/moose (Alces alces), representing accidental definitive and intermediate hosts, respectively. The conspecificity of adult specimens and metacestodes of Taenia lynciscapreoli sp. n. in various host species and regions, and their distinction from related species of Taenia, was confirmed by partial nucleotide sequences of the mitochondrial cytochrome c oxidase subunit 1 gene. Morphologically, Taenia lynciscapreoli sp. n. can be separated unambiguously from all other species of Taenia by the shape of its large rostellar hooks, particularly the characteristically short, wide and strongly curved blade. If the large rostellar hooks are missing, Taenia lynciscapreoli may be separated from related species by a combination of morphological features of mature proglottids. It is suggested that Taenia lynciscapreoli has been present in published materials concerning the tapeworms of Lynx lynx and Lynx pardinus in Europe, but has been misidentified as Taenia pisiformis (Bloch, 1780). Taenia lynciscapreoli sp. n. has not been found in lynx outside the range of roe deer, suggesting a transmission pathway based on a specific predator–prey relationship. The present study applies a novel, simple approach to compare qualitative interspecific differences in the shape of rostellar hooks. PMID:27199592

Lynx: Automatic Elderly Behavior Prediction in Home Telecare

Directory of Open Access Journals (Sweden)

Jose Manuel Lopez-Guede

2015-01-01

Full Text Available This paper introduces Lynx, an intelligent system for personal safety at home environments, oriented to elderly people living independently, which encompasses a decision support machine for automatic home risk prevention, tested in real-life environments to respond to real time situations. The automatic system described in this paper prevents such risks by an advanced analytic methods supported by an expert knowledge system. It is minimally intrusive, using plug-and-play sensors and machine learning algorithms to learn the elder’s daily activity taking into account even his health records. If the system detects that something unusual happens (in a wide sense or if something is wrong relative to the user’s health habits or medical recommendations, it sends at real-time alarm to the family, care center, or medical agents, without human intervention. The system feeds on information from sensors deployed in the home and knowledge of subject physical activities, which can be collected by mobile applications and enriched by personalized health information from clinical reports encoded in the system. The system usability and reliability have been tested in real-life conditions, with an accuracy larger than 81%.

Lynx: Automatic Elderly Behavior Prediction in Home Telecare

Science.gov (United States)

Lopez-Guede, Jose Manuel; Moreno-Fernandez-de-Leceta, Aitor; Martinez-Garcia, Alexeiw; Graña, Manuel

2015-01-01

This paper introduces Lynx, an intelligent system for personal safety at home environments, oriented to elderly people living independently, which encompasses a decision support machine for automatic home risk prevention, tested in real-life environments to respond to real time situations. The automatic system described in this paper prevents such risks by an advanced analytic methods supported by an expert knowledge system. It is minimally intrusive, using plug-and-play sensors and machine learning algorithms to learn the elder's daily activity taking into account even his health records. If the system detects that something unusual happens (in a wide sense) or if something is wrong relative to the user's health habits or medical recommendations, it sends at real-time alarm to the family, care center, or medical agents, without human intervention. The system feeds on information from sensors deployed in the home and knowledge of subject physical activities, which can be collected by mobile applications and enriched by personalized health information from clinical reports encoded in the system. The system usability and reliability have been tested in real-life conditions, with an accuracy larger than 81%. PMID:26783514

Comparative VME Performance Tests for MEN A20 Intel-L865 and RIO-3 PPC-LynxOS platforms

CERN Document Server

Andersen, M; CERN. Geneva. BE Department

2009-01-01

This benchmark note presents test results from reading values over VME using different methods and different sizes of data registers, running on two different platforms Intel-L865 and PPC-LynxOS. We find that the PowerPC is a factor 3 faster in accessing an array of contiguous VME memory locations. Block transfer and DMA read accesses are also tested and compared with conventional single access reads.

Disease-mediated bottom-up regulation: An emergent virus affects a keystone prey, and alters the dynamics of trophic webs.

Science.gov (United States)

Monterroso, Pedro; Garrote, Germán; Serronha, Ana; Santos, Emídio; Delibes-Mateos, Miguel; Abrantes, Joana; Perez de Ayala, Ramón; Silvestre, Fernando; Carvalho, João; Vasco, Inês; Lopes, Ana M; Maio, Elisa; Magalhães, Maria J; Mills, L Scott; Esteves, Pedro J; Simón, Miguel Ángel; Alves, Paulo C

2016-10-31

Emergent diseases may alter the structure and functioning of ecosystems by creating new biotic interactions and modifying existing ones, producing cascading processes along trophic webs. Recently, a new variant of the rabbit haemorrhagic disease virus (RHDV2 or RHDVb) arguably caused widespread declines in a keystone prey in Mediterranean ecosystems - the European rabbit (Oryctolagus cuniculus). We quantitatively assess the impact of RHDV2 on natural rabbit populations and in two endangered apex predator populations: the Iberian lynx (Lynx pardinus) and the Spanish Imperial eagle (Aquila adalberti). We found 60-70% declines in rabbit populations, followed by decreases of 65.7% in Iberian lynx and 45.5% in Spanish Imperial eagle fecundities. A revision of the web of trophic interactions among rabbits and their dependent predators suggests that RHDV2 acts as a keystone species, and may steer Mediterranean ecosystems to management-dependent alternative states, dominated by simplified mesopredator communities. This model system stresses the importance of diseases as functional players in the dynamics of trophic webs.

A hybrid concept (segmented plus monolithic fused silica shells) for a high-throughput and high-angular resolution x-ray mission (Lynx/X-Ray Surveyor like)

Science.gov (United States)

Basso, Stefano; Civitani, Marta; Pareschi, Giovanni; Parodi, Giancarlo

2017-09-01

Lynx is a large area and high angular resolution X-ray mission being studied by NASA to be presented to the next Decadal Survey for the implementation in the next decade. It aims to realize an X-ray telescope with the effective area similar to Athena (2 m2 at 1 keV) but with the same angular resolution of Chandra and a much larger Field Of View (up 20 arcmin x 20 arcmin). The science of X-ray Surveyor requires a large-throughput mirror assembly with sub-arcsec angular resolution. These future X-ray mirrors have a set of requirements which, collectively, represents very substantial advances over any currently in operation or planned for missions other than X-ray Surveyor. Of particular importance is achieving low mass per unit collecting area, while maintaining Chandra like angular resolution. Among the possible solutions under study, the direct polishing of both thin monolithic pseudo-cylindrical shells and segments made of fused silica are being considered as viable solutions for the implementation of the mirrors. Fused silica has very good thermomechanical parameters (including a very low CTE), making the material particularly well suited for for the production of the Lynx mirrors. It should be noted that the use of close shells is also very attractive, since the operations for the integration of the shells will be greatly simplified and the area lost due to the vignetting from the interfacing structures minimized even if the management of such big (diameter of 3 m) and thin shells have to be demonstrated. In this paper we will discuss a possible basic layout for a full shell mirror and a hybrid concept (segmented plus monolithic shells made of fused silica) as a second solution, for the Lynx/XRS telescope, discussing preliminary results in terms of optical and mechanical performance.

Forecasts for the Canadian Lynx time series using method that bombine neural networks, wavelet shrinkage and decomposition

Directory of Open Access Journals (Sweden)

Levi Lopes Teixeira

2015-12-01

Full Text Available Time series forecasting is widely used in various areas of human knowledge, especially in the planning and strategic direction of companies. The success of this task depends on the forecasting techniques applied. In this paper, a hybrid approach to project time series is suggested. To validate the methodology, a time series already modeled by other authors was chosen, allowing the comparison of results. The proposed methodology includes the following techniques: wavelet shrinkage, wavelet decomposition at level r, and artificial neural networks (ANN. Firstly, a time series to be forecasted is submitted to the proposed wavelet filtering method, which decomposes it to components of trend and linear residue. Then, both are decomposed via level r wavelet decomposition, generating r + 1 Wavelet Components (WCs for each one; and then each WC is individually modeled by an ANN. Finally, the predictions for all WCs are linearly combined, producing forecasts to the underlying time series. For evaluating purposes, the time series of Canadian Lynx has been used, and all results achieved by the proposed method were better than others in existing literature.

Study of the Lynx-Cancer void galaxies. - V. The extremely isolated galaxy UGC 4722

Science.gov (United States)

Chengalur, J. N.; Pustilnik, S. A.; Makarov, D. I.; Perepelitsyna, Y. A.; Safonova, E. S.; Karachentsev, I. D.

2015-04-01

We present a detailed study of the extremely isolated Sdm galaxy UGC 4722 (MB = -17.4) located in the nearby Lynx-Cancer void. UGC 4722 is a member of the Catalogue of Isolated Galaxies, and has also been identified as one of the most isolated galaxies in the Local Supercluster. Optical images of the galaxy however show that it has a peculiar morphology with an elongated ˜14 kpc-long plume. New observations with the Russian 6-m telescope (BTA) and the Giant Metrewave Radio Telescope (GMRT) of the ionized and neutral gas in UGC 4722 reveal the second component responsible for the disturbed morphology of the system. This is a small, almost completely destroyed, very gas-rich dwarf (MB = -15.2, M(H I)/LB ˜ 4.3) We estimate the oxygen abundance for both galaxies to be 12 + log (O/H) ˜ 7.5-7.6 which is two to three times lower than what is expected from the luminosity-metallicity relation for similar galaxies in denser environments. The ugr colours of the plume derived from Sloan Digital Sky Survey (SDSS) images are consistent with a simple stellar population with a post starburst age of 0.45-0.5 Gyr. This system hence appears to be the first known case of a minor merger with a prominent tidal feature consisting of a young stellar population.

Gene flow and pathogen transmission among bobcats (Lynx rufus) in a fragmented urban landscape

Science.gov (United States)

Lee, Justin S.; Ruell, Emily W.; Boydston, Erin E.; Lyren, Lisa M.; Alonso, Robert S.; Troyer, Jennifer L.; Crooks, Kevin R.; VandeWoude, Sue

2012-01-01

Urbanization can result in the fragmentation of once contiguous natural landscapes into a patchy habitat interspersed within a growing urban matrix. Animals living in fragmented landscapes often have reduced movement among habitat patches because of avoidance of intervening human development, which potentially leads to both reduced gene flow and pathogen transmission between patches. Mammalian carnivores with large home ranges, such as bobcats (Lynx rufus), may be particularly sensitive to habitat fragmentation. We performed genetic analyses on bobcats and their directly transmitted viral pathogen, feline immunodeficiency virus (FIV), to investigate the effects of urbanization on bobcat movement. We predicted that urban development, including major freeways, would limit bobcat movement and result in genetically structured host and pathogen populations. We analysed molecular markers from 106 bobcats and 19 FIV isolates from seropositive animals in urban southern California. Our findings indicate that reduced gene flow between two primary habitat patches has resulted in genetically distinct bobcat subpopulations separated by urban development including a major highway. However, the distribution of genetic diversity among FIV isolates determined through phylogenetic analyses indicates that pathogen genotypes are less spatially structured--exhibiting a more even distribution between habitat fragments. We conclude that the types of movement and contact sufficient for disease transmission occur with enough frequency to preclude structuring among the viral population, but that the bobcat population is structured owing to low levels of effective bobcat migration resulting in gene flow. We illustrate the utility in using multiple molecular markers that differentially detect movement and gene flow between subpopulations when assessing connectivity.

Non-Deforming, High-Reflectance X-ray Coatings for Lynx and Other Future Missions

Science.gov (United States)

Windt, David

The overarching challenge addressed by this proposal is the development of highreflectance, high-resolution X-ray mirrors, to be used for the construction of lightweight X-ray telescopes for future NASA astronomy missions such as Lynx and others. The proposal's two specific aims are: 1) the development of optimized iridium-based interference coatings for the 0.1–10 keV band; and 2) the development of methods to mitigate coating-stress-induced substrate deformations in thin-shell glass and Si mirror segments. These goals will be achieved by building on established film deposition techniques and metrology infrastructure for X-ray optics that have been developed and advanced by the PI through APRA funding since 1999. Specific Aim #1: Interference Coatings for the 0.1–10 keV Energy Band Telescope effective area can be maximized by using Ir-based reflective coatings that exploit optical interference to provide higher reflectance than Ir alone. However, only preliminary investigations of such coatings have been conducted thus far; more research is required to fully optimize these coatings for maximum performance, to experimentally determine the coating designs that are feasible, and to determine the achievable X-ray reflectance, film stress, surface roughness, and thermal and temporal stability. The first specific aim of this proposal is to reach these very goals through a comprehensive research program. Demonstration of the achievable reflectance, stress, and roughness in stable, optimized coatings will in turn facilitate global telescope design optimization, by identifying the best coating for each mirror shell based on incidence angle, and on telescope effective-area and field-of-view requirements. The research has the potential to greatly increase the effective area of future X-ray telescopes. Specific Aim #2: Mitigation of Coating-Stress-Induced Substrate Deformations High-quality films of Ir and other candidate materials (e.g., B4C) to be investigated for the 0

Quantification of the humoral immune response and hemoplasma blood and tissue loads in cats coinfected with 'Candidatus Mycoplasma haemominutum' and feline leukemia virus.

Science.gov (United States)

Wolf-Jäckel, Godelind A; Cattori, Valentino; Geret, Catrina P; Novacco, Marilisa; Meli, Marina L; Riond, Barbara; Boretti, Felicitas S; Lutz, Hans; Hofmann-Lehmann, Regina

2012-08-01

'Candidatus Mycoplasma haemominutum' (CMhm) is a hemotropic mycoplasma (aka hemoplasma) of domestic cats and wild felids. In a transmission study, we exposed eight specified pathogen-free cats to blood from Iberian lynxes (Lynx pardinus) infected with CMhm. The cats were coinfected with feline leukemia virus (FeLV) from an Iberian lynx or with a prototype FeLV. The goal of the present study was to quantify the humoral immune response to CMhm and to identify potential target tissues and sequestration sites. Antibodies were measured by a recombinant antigen-based enzyme-linked immunosorbent assay, and blood and tissue loads were quantified using real-time PCR. Seven out of eight cats became CMhm-infected; all of these cats seroconverted between 3 and 13 weeks after inoculation. Antibody levels correlated with the CMhm blood loads. The peak CMhm blood loads were inversely correlated with the incubation period. PCR-positive results were found in all 24 tissues tested but not for all samples. Although all tissues were PCR-positive in one cat euthanized ten weeks after infection, many tissues tested negative in six cats euthanized at week 20 after infection. In several cats, the spleen, lung, liver, heart and aorta contained more copies than expected given the tissue's blood supply, but most tissues contained fewer copies than expected. In conclusion, this is the first study to quantify the humoral immune response and tissue loads in CMhm-FeLV-coinfected cats. The tissue loads appeared to correlate with the duration of infection and with the blood loads, but no evidence of significant CMhm tissue sequestration was found. Copyright © 2012 Elsevier Ltd. All rights reserved.

Use of non-invasive genetics to generate core-area population estimates of a threatened predator in the Superior National Forest, USA

Science.gov (United States)

Barber-Meyer, Shannon; Ryan, Daniel; Grosshuesch, David; Catton, Timothy; Malick-Wahls, Sarah

2018-01-01

Canada lynx (Lynx canadensis) are found in boreal forests of Canada and Alaska and range southward into the contiguous United States. Much less is understood about lynx in their southern range compared to northern populations. Because lynx are currently listed as threatened under the US Endangered Species Act but have recently been recommended for delisting, information on their southern populations is important for lynx recovery, conservation, and management. We used non-invasive, genetic data collected during lynx snowtracking surveys from 2012-2017 to generate core-area estimates of abundance, trend and density in selected core areas of the Superior National Forest of Minnesota, USA. Lynx abundance estimates averaged 41.8 (SD=14.7, range=24-67) during 2012-2017 in the smaller

Fused silica segments: a possible solution for x-ray telescopes with very high angular resolution like Lynx/XRS

Science.gov (United States)

Salmaso, Bianca; Basso, Stefano; Civitani, Marta; Ghigo, Mauro; Hołyszko, Joanna; Spiga, Daniele; Vecchi, Gabriele; Pareschi, Giovanni

2017-09-01

In order to look beyond Chandra, the Lynx/XRS mission has been proposed in USA and is currently studied by NASA. The optic will have an effective area of 2.5 m2 and an angular resolution of 0.5 arcsec HEW at 1 keV. In order to fulfill these requirements different technologies are considered, with the approaches of both full and segmented shells (that, possibly, can be also combined together). Concerning the production of segmented mirrors, a variety of thin substrates (glass, metal, silicon) are envisaged, that can be produced using both direct polishing or replication methods. Innovative post-fabrication correction methods (such as piezoelectric or magneto-restrictive film actuators on the back surface, differential deposition, ion implantation) are being also considered in order to reach the final tolerances. In this paper we are presenting a technology development based on fused silica (SiO2) segmented substrates, owing the low coefficient of thermal expansion of Fused Silica and its high chemical stability compared to other glasses. Thin SiO2 segmented substrates (typically 2 mm thick) are figured by direct polishing combined with final profile ion figuring correction, while the roughness reduction is reached with pitch tools. For the profile and roughness correction, the segments are glued to a substrate. In this paper we present the current status of this technology.

Bobcats (Lynx rufus) as a Model Organism to Investigate the Effects of Roads on Wide-Ranging Carnivores.

Science.gov (United States)

Litvaitis, John A; Reed, Gregory C; Carroll, Rory P; Litvaitis, Marian K; Tash, Jeffrey; Mahard, Tyler; Broman, Derek J A; Callahan, Catherine; Ellingwood, Mark

2015-06-01

We are using bobcats (Lynx rufus) as a model organism to examine how roads affect the abundance, distribution, and genetic structure of a wide-ranging carnivore. First, we compared the distribution of bobcat-vehicle collisions to road density and then estimated collision probabilities for specific landscapes using a moving window with road-specific traffic volume. Next, we obtained incidental observations of bobcats from the public, camera-trap detections, and locations of bobcats equipped with GPS collars to examine habitat selection. These data were used to generate a cost-surface map to investigate potential barrier effects of roads. Finally, we have begun an examination of genetic structure of bobcat populations in relation to major road networks. Distribution of vehicle-killed bobcats was correlated with road density, especially state and interstate highways. Collision models suggested that some regions may function as demographic sinks. Simulated movements in the context of the cost-surface map indicated that some major roads may be barriers. These patterns were supported by the genetic structure of bobcats. The sharpest divisions among genetically distinct demes occurred along natural barriers (mountains and large lakes) and in road-dense regions. In conclusion, our study has demonstrated the utility of using bobcats as a model organism to understand the variety of threats that roads pose to a wide-ranging species. Bobcats may also be useful as one of a group of focal species while developing approaches to maintain existing connectivity or mitigate the negative effects of roads.

Variability in assays used for detection of lentiviral infection in bobcats (Lynx rufus), pumas (Puma concolor), and ocelots (Leopardus pardalis)

Science.gov (United States)

Franklin, S.P.; Troyer, J.L.; TerWee, J.A.; Lyren, L.M.; Kays, R.W.; Riley, S.P.D.; Boyce, W.M.; Crooks, K.R.; VandeWoude, S.

2007-01-01

Although lentiviruses similar to feline immunodeficiency virus (FIV) are known to infect numerous felid species, the relative utility of assays used for detecting lentiviral infection has not been compared for many of these hosts. We tested bobcats (Lynx rufus), pumas (Felis concolor), and ocelots (Leopardus pardalis) for exposure to lentivirus using five different assays: puma lentivirus (PLV), African lion lentivirus (LLV), and domestic cat FIV-based immunoblots, a commercially available enzyme-linked immunosorbent assay (ELISA) kit, and nested polymerase chain reaction (PCR). Puma lentivirus immunoblots identified more seropositive individuals than the other antibody-detection assays. The commercial ELISA provided a fair ability to recognize seropositive samples when compared with PLV immunoblot for screening bobcats and ocelots, but not pumas. Polymerase chain reaction identified fewer positive samples than PLV immunoblot for all three species. Immunoblot results were equivalent whether the sample tested was serum, plasma, or whole blood. The results from this study and previous investigations suggest that the PLV immunoblot has the greatest ability to detect reactive samples when screening wild felids of North America and is unlikely to produce false positive results. However, the commercial ELISA kit may provide ap adequate alternative for screening of some species and is more easily adapted to field conditions. ?? Wildlife Disease Association 2007.

Environmental Assessment: Space Innovation and Development Center Schriever AFB, Colorado

Science.gov (United States)

2006-03-01

coloradensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Least tern (interior population) .A Sterna antillarum E Mexican spotted owl Strix...Haliaeetus leucocephalus T Boreal toad Bufo boreas boreas c Canada lynx Lynx canadensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Least...T CUSTER Bald eagle IIaliaeetus leucocephalus T Canada lynx Lynx canadensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Mexican

Key role of European rabbits in the conservation of the Western Mediterranean basin hotspot.

Science.gov (United States)

Delibes-Mateos, Miguel; Delibes, Miguel; Ferreras, Pablo; Villafuerte, Rafael

2008-10-01

The Mediterranean Basin is a global hotspot of biodiversity. Hotspots are said to be experiencing a major loss of habitat, but an added risk could be the decline of some species having a special role in ecological relationships of the system. We reviewed the role of European rabbits (Oryctolagus cuniculus) as a keystone species in the Iberian Peninsula portion of the Mediterranean hotspot. Rabbits conspicuously alter plant species composition and vegetation structure through grazing and seed dispersal, which creates open areas and preserves plant species diversity. Moreover, rabbit latrines have a demonstrable effect on soil fertility and plant growth and provide new feeding resources for many invertebrate species. Rabbit burrows provide nest sites and shelter for vertebrates and invertebrates. In addition, rabbits serve as prey for a number of predators, including the critically endangered Iberian lynx (Lynx pardinus) and Spanish Imperial Eagle (Aquila adalberti). Thus, the Mediterranean ecosystem of the Iberian Peninsula should be termed "the rabbit's ecosystem." To our knowledge, this is the first empirical support for existence of a multifunctional keystone species in a global hotspot of biodiversity. Rabbit populations have declined drastically on the Iberian Peninsula, with potential cascading effects and serious ecological and economic consequences. From this perspective, rabbit recovery is one of the biggest challenges for conservation of the Mediterranean Basin hotspot.

Use of stratigraphic models as soft information to constrain stochastic modeling of rock properties: Development of the GSLIB-Lynx integration module

International Nuclear Information System (INIS)

Cromer, M.V.; Rautman, C.A.

1995-10-01

Rock properties in volcanic units at Yucca Mountain are controlled largely by relatively deterministic geologic processes related to the emplacement, cooling, and alteration history of the tuffaceous lithologic sequence. Differences in the lithologic character of the rocks have been used to subdivide the rock sequence into stratigraphic units, and the deterministic nature of the processes responsible for the character of the different units can be used to infer the rock material properties likely to exist in unsampled regions. This report proposes a quantitative, theoretically justified method of integrating interpretive geometric models, showing the three-dimensional distribution of different stratigraphic units, with numerical stochastic simulation techniques drawn from geostatistics. This integration of soft, constraining geologic information with hard, quantitative measurements of various material properties can produce geologically reasonable, spatially correlated models of rock properties that are free from stochastic artifacts for use in subsequent physical-process modeling, such as the numerical representation of ground-water flow and radionuclide transport. Prototype modeling conducted using the GSLIB-Lynx Integration Module computer program, known as GLINTMOD, has successfully demonstrated the proposed integration technique. The method involves the selection of stratigraphic-unit-specific material-property expected values that are then used to constrain the probability function from which a material property of interest at an unsampled location is simulated

A baseline and watershed assessment in the Lynx Creek, Brenot Creek, and Portage Creek watersheds near Hudson's Hope, BC : summary report

International Nuclear Information System (INIS)

Matscha, G.; Sutherland, D.

2005-06-01

This report summarized a baseline monitoring program for the Lynx Creek, Brenot Creek, and Portage Creek watersheds located near Hudson's Hope, British Columbia (BC). The monitoring program was designed to more accurately determine the effects of potential coalbed gas developments in the region, as well as to assess levels of agricultural and forest harvesting, and the impacts of current land use activities on water quantity and quality. Water quality was sampled at 18 sites during 5 different flow regimes, including summer and fall low flows; ice cover; spring run-off; and high flows after a heavy summer rain event. Sample sites were located up and downstream of both forest and agricultural activities. The water samples were analyzed for 70 contaminants including ions, nutrients, metals, hydrocarbons, and hydrocarbon fractions. Results showed that while many analyzed parameters met current BC water quality guidelines, total organic carbon, manganese, cadmium, E. coli, fecal coliforms, and fecal streptococci often exceeded recommended guidelines. Aluminum and cobalt values exceeded drinking water guidelines. The samples also had a slightly alkaline pH and showed high conductance. A multiple barrier approach was recommended to reduce potential risks of contamination from the watersheds. It was concluded that a more refined bacteria source tracking method is needed to determine whether fecal pollution has emanated from human, livestock or wildlife sources. 1 tab., 9 figs

Selective Predation of a Stalking Predator on Ungulate Prey.

Directory of Open Access Journals (Sweden)

Marco Heurich

Full Text Available Prey selection is a key factor shaping animal populations and evolutionary dynamics. An optimal forager should target prey that offers the highest benefits in terms of energy content at the lowest costs. Predators are therefore expected to select for prey of optimal size. Stalking predators do not pursue their prey long, which may lead to a more random choice of prey individuals. Due to difficulties in assessing the composition of available prey populations, data on prey selection of stalking carnivores are still scarce. We show how the stalking predator Eurasian lynx (Lynx lynx selects prey individuals based on species identity, age, sex and individual behaviour. To address the difficulties in assessing prey population structure, we confirm inferred selection patterns by using two independent data sets: (1 data of 387 documented kills of radio-collared lynx were compared to the prey population structure retrieved from systematic camera trapping using Manly's standardized selection ratio alpha and (2 data on 120 radio-collared roe deer were analysed using a Cox proportional hazards model. Among the larger red deer prey, lynx selected against adult males-the largest and potentially most dangerous prey individuals. In roe deer lynx preyed selectively on males and did not select for a specific age class. Activity during high risk periods reduced the risk of falling victim to a lynx attack. Our results suggest that the stalking predator lynx actively selects for size, while prey behaviour induces selection by encounter and stalking success rates.

Usability of large carnivore as a keystone species in Eastern Black ...

African Journals Online (AJOL)

The aim of the study was to investigate the keystone species property of Brown bear (Ursus arctos), Wolf (Canis lupus) and Eurasian lynx (Lynx lynx). The main selecting criteria for keystone species can be summarized as top predator or large carnivore important prey species or provide key resources and species having ...

ENS Implementation - Part of the PSO Eltra contract 4524/2003

DEFF Research Database (Denmark)

Teodorescu, Remus; Blaabjerg, Frede; Asiminoaei, Lucian

with PowerLynx A/S for the development of the ENS function for the PowerLynx PV inverters. The work started 01.01.03 and ended 29.02.04 and involved Frede Blaabjerg, Remus Teodorescu, Lucian Asiminoaei and Adrian Timbus from Aalborg University and Uffe Borup from PowerLynx A/S. The objective was ...

Selecting habitat to survive: the impact of road density on survival in a large carnivore.

Directory of Open Access Journals (Sweden)

Mathieu Basille

Full Text Available Habitat selection studies generally assume that animals select habitat and food resources at multiple scales to maximise their fitness. However, animals sometimes prefer habitats of apparently low quality, especially when considering the costs associated with spatially heterogeneous human disturbance. We used spatial variation in human disturbance, and its consequences on lynx survival, a direct fitness component, to test the Hierarchical Habitat Selection hypothesis from a population of Eurasian lynx Lynx lynx in southern Norway. Data from 46 lynx monitored with telemetry indicated that a high proportion of forest strongly reduced the risk of mortality from legal hunting at the home range scale, while increasing road density strongly increased such risk at the finer scale within the home range. We found hierarchical effects of the impact of human disturbance, with a higher road density at a large scale reinforcing its negative impact at a fine scale. Conversely, we demonstrated that lynx shifted their habitat selection to avoid areas with the highest road densities within their home ranges, thus supporting a compensatory mechanism at fine scale enabling lynx to mitigate the impact of large-scale disturbance. Human impact, positively associated with high road accessibility, was thus a stronger driver of lynx space use at a finer scale, with home range characteristics nevertheless constraining habitat selection. Our study demonstrates the truly hierarchical nature of habitat selection, which aims at maximising fitness by selecting against limiting factors at multiple spatial scales, and indicates that scale-specific heterogeneity of the environment is driving individual spatial behaviour, by means of trade-offs across spatial scales.

Population and genetic outcomes 20 years after reintroducing bobcats (Lynx rufus) to Cumberland Island, Georgia USA

Science.gov (United States)

Diefenbach, Duane R.; Hansen, Leslie A.; Bohling, Justin H.; Miller-Butterworth, Cassandra

2015-01-01

In 1988–1989, 32 bobcats Lynx rufus were reintroduced to Cumberland Island (CUIS), Georgia, USA, from which they had previously been extirpated. They were monitored intensively for 3 years immediately post-reintroduction, but no estimation of the size or genetic diversity of the population had been conducted in over 20 years since reintroduction. We returned to CUIS in 2012 to estimate abundance and effective population size of the present-day population, as well as to quantify genetic diversity and inbreeding. We amplified 12 nuclear microsatellite loci from DNA isolated from scats to establish genetic profiles to identify individuals. We used spatially explicit capture–recapture population estimation to estimate abundance. From nine unique genetic profiles, we estimate a population size of 14.4 (SE = 3.052) bobcats, with an effective population size (Ne) of 5–8 breeding individuals. This is consistent with predictions of a population viability analysis conducted at the time of reintroduction, which estimated the population would average 12–13 bobcats after 10 years. We identified several pairs of related bobcats (parent-offspring and full siblings), but ~75% of the pairwise comparisons were typical of unrelated individuals, and only one individual appeared inbred. Despite the small population size and other indications that it has likely experienced a genetic bottleneck, levels of genetic diversity in the CUIS bobcat population remain high compared to other mammalian carnivores. The reintroduction of bobcats to CUIS provides an opportunity to study changes in genetic diversity in an insular population without risk to this common species. Opportunities for natural immigration to the island are limited; therefore, continued monitoring and supplemental bobcat reintroductions could be used to evaluate the effect of different management strategies to maintain genetic diversity and population viability. The successful reintroduction and maintenance of a

Strategic Integration of Multiple Bioinformatics Resources for System Level Analysis of Biological Networks.

Science.gov (United States)

D'Souza, Mark; Sulakhe, Dinanath; Wang, Sheng; Xie, Bing; Hashemifar, Somaye; Taylor, Andrew; Dubchak, Inna; Conrad Gilliam, T; Maltsev, Natalia

2017-01-01

Recent technological advances in genomics allow the production of biological data at unprecedented tera- and petabyte scales. Efficient mining of these vast and complex datasets for the needs of biomedical research critically depends on a seamless integration of the clinical, genomic, and experimental information with prior knowledge about genotype-phenotype relationships. Such experimental data accumulated in publicly available databases should be accessible to a variety of algorithms and analytical pipelines that drive computational analysis and data mining.We present an integrated computational platform Lynx (Sulakhe et al., Nucleic Acids Res 44:D882-D887, 2016) ( http://lynx.cri.uchicago.edu ), a web-based database and knowledge extraction engine. It provides advanced search capabilities and a variety of algorithms for enrichment analysis and network-based gene prioritization. It gives public access to the Lynx integrated knowledge base (LynxKB) and its analytical tools via user-friendly web services and interfaces. The Lynx service-oriented architecture supports annotation and analysis of high-throughput experimental data. Lynx tools assist the user in extracting meaningful knowledge from LynxKB and experimental data, and in the generation of weighted hypotheses regarding the genes and molecular mechanisms contributing to human phenotypes or conditions of interest. The goal of this integrated platform is to support the end-to-end analytical needs of various translational projects.

Sensitivity of a methematical model used to optimize revenue in a predation-competative farming environment

Directory of Open Access Journals (Sweden)

J. Swart

2003-12-01

Full Text Available Sheep farmers in the Cape Midlands region of South Africa frequently sustain stock losses through predation by caracal lynx. Further losses are incurred when hyrax compete with sheep for available pasture. Hyrax constitute the natural prey for lynx with the result that culling either hyrax or lynx has complicated feedback effects. In order to investigate the spill-over problems from the natural predator-prey system on farming revenue, a differential equations model was previously formulated, comprising the sectors Hyrax, Lynx, Sheep, Pasture and Revenue and an optimisation procedure was used to determine the optimal culling rate policy for farmers. The purpose of this paper is to investigate the numerical, behavioural and policy sensitivity of this model to parameter uncertainty.

Top predators, mesopredators and their prey: interference ecosystems along bioclimatic productivity gradients.

Science.gov (United States)

Elmhagen, B; Ludwig, G; Rushton, S P; Helle, P; Lindén, H

2010-07-01

1. The Mesopredator Release Hypothesis (MRH) suggests that top predator suppression of mesopredators is a key ecosystem function with cascading impacts on herbivore prey, but it remains to be shown that this top-down cascade impacts the large-scale structure of ecosystems. 2. The Exploitation Ecosystems Hypothesis (EEH) predicts that regional ecosystem structures are determined by top-down exploitation and bottom-up productivity. In contrast to MRH, EEH assumes that interference among predators has a negligible impact on the structure of ecosystems with three trophic levels. 3. We use the recolonization of a top predator in a three-level boreal ecosystem as a natural experiment to test if large-scale biomass distributions and population trends support MRH. Inspired by EEH, we also test if top-down interference and bottom-up productivity impact regional ecosystem structures. 4. We use data from the Finnish Wildlife Triangle Scheme which has monitored top predator (lynx, Lynx lynx), mesopredator (red fox, Vulpes vulpes) and prey (mountain hare, Lepus timidus) abundance for 17 years in a 200 000 km(2) study area which covers a distinct productivity gradient. 5. Fox biomass was lower than expected from productivity where lynx biomass was high, whilst hare biomass was lower than expected from productivity where fox biomass was high. Hence, where interference controlled fox abundance, lynx had an indirect positive impact on hare abundance as predicted by MRH. The rates of change indicated that lynx expansion gradually suppressed fox biomass. 6. Lynx status caused shifts between ecosystem structures. In the 'interference ecosystem', lynx and hare biomass increased with productivity whilst fox biomass did not. In the 'mesopredator release ecosystem', fox biomass increased with productivity but hare biomass did not. Thus, biomass controlled top-down did not respond to changes in productivity. This fulfils a critical prediction of EEH. 7. We conclude that the cascade

Isolation and Genetic Characterization of Toxoplasma gondii from Black Bears (Ursus americanus), Bobcats (Lynx rufus), and Feral Cats (Felis catus) from Pennsylvania.

Science.gov (United States)

Dubey, Jitender P; Verma, Shiv K; Calero-Bernal, Rafael; Cassinelli, Ana B; Kwok, Oliver C H; Van Why, Kyle; Su, Chunlei; Humphreys, Jan G

2015-01-01

Toxoplasma gondii infects virtually all warm-blooded hosts worldwide. Recently, attention has been focused on the genetic diversity of the parasite to explain its pathogenicity in different hosts. It has been hypothesized that interaction between feral and domestic cycles of T. gondii may increase unusual genotypes in domestic cats and facilitate transmission of potentially more pathogenic genotypes to humans, domestic animals, and wildlife. In the present study, we tested black bear (Ursus americanus), bobcat (Lynx rufus), and feral cat (Felis catus) from the state of Pennsylvania for T. gondii infection. Antibodies to T. gondii were found in 32 (84.2%) of 38 bears, both bobcats, and 2 of 3 feral cats tested by the modified agglutination test (cut off titer 1:25). Hearts from seropositive animals were bioassayed in mice, and viable T. gondii was isolated from 3 of 32 bears, 2 of 2 bobcats, and 2 of 3 feral cats. DNA isolated from culture-derived tachyzoites of these isolates was characterized using multilocus PCR-RFLP markers. Three genotypes were revealed, including ToxoDB PCR-RFLP genotype #1 or #3 (Type II, 1 isolate), #5 (Type 12, 3 isolates), and #216 (3 isolates), adding to the evidence of genetic diversity of T. gondii in wildlife in Pennsylvania. Pathogenicity of 3 T. gondii isolates (all #216, 1 from bear, and 2 from feral cat) was determined in outbred Swiss Webster mice; all three were virulent causing 100% mortality. Results indicated that highly mouse pathogenic strains of T. gondii are circulating in wildlife, and these strains may pose risk to infect human through consuming of game meat. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

Snapshot of Viral Infections in Wild Carnivores Reveals Ubiquity of Parvovirus and Susceptibility of Egyptian Mongoose to Feline Panleukopenia Virus

Science.gov (United States)

Duarte, Margarida D.; Henriques, Ana Margarida; Barros, Sílvia Carla; Fagulha, Teresa; Mendonça, Paula; Carvalho, Paulo; Monteiro, Madalena; Fevereiro, Miguel; Basto, Mafalda P.; Rosalino, Luís Miguel; Barros, Tânia; Bandeira, Victor; Fonseca, Carlos; Cunha, Mónica V.

2013-01-01

endangered Iberian lynx (Lynx pardinus). PMID:23527182

Modelling landscape-level numerical responses of predators to prey: the case of cats and rabbits.

Directory of Open Access Journals (Sweden)

Jennyffer Cruz

Full Text Available Predator-prey systems can extend over large geographical areas but empirical modelling of predator-prey dynamics has been largely limited to localised scales. This is due partly to difficulties in estimating predator and prey abundances over large areas. Collection of data at suitably large scales has been a major problem in previous studies of European rabbits (Oryctolagus cuniculus and their predators. This applies in Western Europe, where conserving rabbits and predators such as Iberian lynx (Lynx pardinus is important, and in other parts of the world where rabbits are an invasive species supporting populations of introduced, and sometimes native, predators. In pastoral regions of New Zealand, rabbits are the primary prey of feral cats (Felis catus that threaten native fauna. We estimate the seasonal numerical response of cats to fluctuations in rabbit numbers in grassland-shrubland habitat across the Otago and Mackenzie regions of the South Island of New Zealand. We use spotlight counts over 1645 km of transects to estimate rabbit and cat abundances with a novel modelling approach that accounts simultaneously for environmental stochasticity, density dependence and varying detection probability. Our model suggests that cat abundance is related consistently to rabbit abundance in spring and summer, possibly through increased rabbit numbers improving the fecundity and juvenile survival of cats. Maintaining rabbits at low abundance should therefore suppress cat numbers, relieving predation pressure on native prey. Our approach provided estimates of the abundance of cats and rabbits over a large geographical area. This was made possible by repeated sampling within each season, which allows estimation of detection probabilities. A similar approach could be applied to predator-prey systems elsewhere, and could be adapted to any method of direct observation in which there is no double-counting of individuals. Reliable estimates of numerical

The influence of snowmobile trails on coyote movements during winter in high-elevation landscapes.

Directory of Open Access Journals (Sweden)

Eric M Gese

Full Text Available Competition between sympatric carnivores has long been of interest to ecologists. Increased understanding of these interactions can be useful for conservation planning. Increased snowmobile traffic on public lands and in habitats used by Canada lynx (Lynx canadensis remains controversial due to the concern of coyote (Canis latrans use of snowmobile trails and potential competition with lynx. Determining the variables influencing coyote use of snowmobile trails has been a priority for managers attempting to conserve lynx and their critical habitat. During 2 winters in northwest Wyoming, we backtracked coyotes for 265 km to determine how varying snow characteristics influenced coyote movements; 278 km of random backtracking was conducted simultaneously for comparison. Despite deep snow (>1 m deep, radio-collared coyotes persisted at high elevations (>2,500 m year-round. All coyotes used snowmobile trails for some portion of their travel. Coyotes used snowmobile trails for 35% of their travel distance (random: 13% for a mean distance of 149 m (random: 59 m. Coyote use of snowmobile trails increased as snow depth and penetrability off trails increased. Essentially, snow characteristics were most influential on how much time coyotes spent on snowmobile trails. In the early months of winter, snow depth was low, yet the snow column remained dry and the coyotes traveled off trails. As winter progressed and snow depth increased and snow penetrability increased, coyotes spent more travel distance on snowmobile trails. As spring approached, the snow depth remained high but penetrability decreased, hence coyotes traveled less on snowmobile trails because the snow column off trail was more supportive. Additionally, coyotes traveled closer to snowmobile trails than randomly expected and selected shallower snow when traveling off trails. Coyotes also preferred using snowmobile trails to access ungulate kills. Snow compaction from winter recreation influenced

The influence of snowmobile trails on coyote movements during winter in high-elevation landscapes.

Science.gov (United States)

Gese, Eric M; Dowd, Jennifer L B; Aubry, Lise M

2013-01-01

Competition between sympatric carnivores has long been of interest to ecologists. Increased understanding of these interactions can be useful for conservation planning. Increased snowmobile traffic on public lands and in habitats used by Canada lynx (Lynx canadensis) remains controversial due to the concern of coyote (Canis latrans) use of snowmobile trails and potential competition with lynx. Determining the variables influencing coyote use of snowmobile trails has been a priority for managers attempting to conserve lynx and their critical habitat. During 2 winters in northwest Wyoming, we backtracked coyotes for 265 km to determine how varying snow characteristics influenced coyote movements; 278 km of random backtracking was conducted simultaneously for comparison. Despite deep snow (>1 m deep), radio-collared coyotes persisted at high elevations (>2,500 m) year-round. All coyotes used snowmobile trails for some portion of their travel. Coyotes used snowmobile trails for 35% of their travel distance (random: 13%) for a mean distance of 149 m (random: 59 m). Coyote use of snowmobile trails increased as snow depth and penetrability off trails increased. Essentially, snow characteristics were most influential on how much time coyotes spent on snowmobile trails. In the early months of winter, snow depth was low, yet the snow column remained dry and the coyotes traveled off trails. As winter progressed and snow depth increased and snow penetrability increased, coyotes spent more travel distance on snowmobile trails. As spring approached, the snow depth remained high but penetrability decreased, hence coyotes traveled less on snowmobile trails because the snow column off trail was more supportive. Additionally, coyotes traveled closer to snowmobile trails than randomly expected and selected shallower snow when traveling off trails. Coyotes also preferred using snowmobile trails to access ungulate kills. Snow compaction from winter recreation influenced coyote

78 FR 53002 - Notice of Proposed Buy America Waiver for a Video Ready Access Device Cabinet

Science.gov (United States)

2013-08-27

... relocation associated with the LYNX Blue Line Extension project. This notice is to inform the public of the... by AT&T. This utility relocation will be performed in connection with the CATS LYNX Blue Line... of the components of the product must be of U.S. origin. A component is considered of U.S. origin if...

Landscape location affects genetic variation of Canada lynx (Lynx canadensis)

Science.gov (United States)

M. K. Schwartz; L. S. Mills; Y. Ortega; L. F. Ruggiero; F. W. Allendorf

2003-01-01

The effect of a population's location on the landscape on genetic variation has been of interest to population genetics for more than half a century. However, most studies do not consider broadscale biogeography when interpreting genetic data. In this study, we propose an operational definition of a peripheral population, and then explore whether peripheral...

Mapping trends of large and medium size carnivores of conservation interest in Romania

Directory of Open Access Journals (Sweden)

Constantin Cazacu

2014-07-01

Full Text Available We analysed yearly estimates of population size data during 2001-2012 for five carnivores species of conservation interest (Ursus arctos, Canis lupus, Lynx lynx, Felis silvestris and Canis aureus. Population size estimations were done by the game management authorities and integrated by the competent authorities on the Ministry of Environment and Climate Change. Trends in data were detected using non-parametric Mann-Kendall test. This test was chosen considering the short length of data series and its usefulness for non-normal distributed data. The trend was tested at three spatial scales: game management units (n=1565, biogeographical region (n=5 and national. Trends depicted for each game management unit were plotted using ArcGIS, resulting species trend distribution maps. For the studied period increasing population trends were observed for Ursus arctos, Canis lupus, Canis aureus and Lynx lynx, while for Felis silvestris there was no trend recorded. Such an analysis in especially useful for conservation proposes, game management and reporting obligations under article 17 of the EC Habitat Directive, using population trend as a proxy for population dynamics. We conclude that the status of the five carnivore species is favourable during the study period.

Environmental Impact Analysis Process. Draft Environmental Impact Statement Proposed Alaskan Radar System Over-the-Horizon Backscatter Radar Program

Science.gov (United States)

1986-08-01

Mustela vison wolverine Gulo Kulo river otter Lutra canadensis lynx Lynx canadensis moose Alces alces caribou Rangifer tarandus Dall’s sheep Ovic dalli...tissue respiratory chain function at a power density of 5 mW/cm2 . It is unlikely that such effects would be detectable at the power densities at ground...Vulves vulpes black bear Ursus americanus grizzly bear Ursus arctos marten Martes americana ermine Mustela erminea least weasel Mustela nivalis mink

Suborbital Reusable Launch Vehicles as an Opportunity to Consolidate and Calibrate Ground Based and Satellite Instruments

Science.gov (United States)

Papadopoulos, K.

2014-12-01

XCOR Aerospace, a commercial space company, is planning to provide frequent, low cost access to near-Earth space on the Lynx suborbital Reusable Launch Vehicle (sRLV). Measurements in the external vacuum environment can be made and can launch from most runways on a limited lead time. Lynx can operate as a platform to perform suborbital in situ measurements and remote sensing to supplement models and simulations with new data points. These measurements can serve as a quantitative link to existing instruments and be used as a basis to calibrate detectors on spacecraft. Easier access to suborbital data can improve the longevity and cohesiveness of spacecraft and ground-based resources. A study of how these measurements can be made on Lynx sRLV will be presented. At the boundary between terrestrial and space weather, measurements from instruments on Lynx can help develop algorithms to optimize the consolidation of ground and satellite based data as well as assimilate global models with new data points. For example, current tides and the equatorial electrojet, essential to understanding the Thermosphere-Ionosphere system, can be measured in situ frequently and on short notice. Furthermore, a negative-ion spectrometer and a Faraday cup, can take measurements of the D-region ion composition. A differential GPS receiver can infer the spatial gradient of ionospheric electron density. Instruments and optics on spacecraft degrade over time, leading to calibration drift. Lynx can be a cost effective platform for deploying a reference instrument to calibrate satellites with a frequent and fast turnaround and a successful return of the instrument. A calibrated reference instrument on Lynx can make collocated observations as another instrument and corrections are made for the latter, thus ensuring data consistency and mission longevity. Aboard a sRLV, atmospheric conditions that distort remotely sensed data (ground and spacecraft based) can be measured in situ. Moreover, an

LYNX: A Linked Eulerian and Lagrangian Code. Volume II. LYNX Computer Listing

Science.gov (United States)

1975-11-01

AS »TOUMP ,PMlN it« , JMAX • NCYC , ISEP .OELZZ »BND ,RHOZ .DTOUMP .VSCALE ,XPl , IMAXM , 1CR ,JSEP FAK HMU TCP EPS XP2 JMAXM JCR... ISEP 0005 0003 0000 1 0005 0000 I 000006 12 JOUO I 000002 J 0001 000054 JCR 0003 077307 JCRACK 0001 000015 JHAA uoji 000017 JMAXM 0030 1 OOOOOS JP...OTOUMP 000’ OYP OOOM I FB 0003 FT OOOM I GOT OOOM 1EDJT 0000 1 IMAS OOOM ISEP ooos JMAX OOOM KMAX ooos NOUMP OOOM PART 0005 REV 0003 SMALL

Mammal (Mammalia Fauna of Kapıdağ Peninsula

Directory of Open Access Journals (Sweden)

Erdem HIZAL

2008-01-01

Full Text Available The number of studies on mammals of Kapıdag Peninsula is insufficent. The present study is based on mammal species collected and observed in Kapıdag Peninsula. Kapıdag Peninsula was visited as a total of 226 days between 2001-2007. Field collections yielded 32 mammal species from 6 orders: Insectivora (5, Chiroptera (9,Lagomorpha (1, Rodentia (7, Carnivora (7, Artiodactyla (3. Of the species recorded in this study are rare for Kapıdag Peninsula: Lynx lynx and Felis silvestris.

Can only poorer European countries afford large carnivores?

Science.gov (United States)

Kojola, Ilpo; Hallikainen, Ville; Helle, Timo; Swenson, Jon E

2018-01-01

One of the classic approaches in environmental economics is the environmental Kuznets curve, which predicts that when a national economy grows from low to medium levels, threats to biodiversity conservation increase, but they decrease when the economy moves from medium to high. We evaluated this approach by examining how population densities of the brown bear (Ursus arctos), gray wolf (Canis lupus), and Eurasian lynx (Lynx lynx) were related to the national economy in 24 European countries. We used forest proportions, the existence of a compensation system, and country group (former socialist countries, Nordic countries, other countries) as covariates in a linear model with the first- and the second-order polynomial terms of per capita gross domestic product (GDP). Country group was treated as a random factor, but remained insignificant and was ignored. All models concerning brown bear and wolf provided evidence that population densities decreased with increasing GDP, but densities of lynx were virtually independent of GDP. Models for the wolf explained >80% of the variation in densities, without a difference between the models with all independent variables and the model with only GDP. For the bear, the model with GDP alone accounted for 10%, and all three variables 33%, of the variation in densities. Wolves exhibit a higher capacity for dispersal and reproduction than bear or lynx, but still exists at the lowest densities in wealthy European countries. We are aware that several other factors, not available for our models, influenced large carnivore densities. Based on the pronounced differences among large carnivore species in their countrywide relationships between densities and GDP, and a strikingly high relationship for the gray wolf, we suggest that our results reflected differences in political history and public acceptance of these species among countries. The compensation paid for the damages caused by the carnivores is not a key to higher carnivore

Mega starbirth cluster is biggest, brightest and hottest ever seen

Science.gov (United States)

2003-10-01

Artist’s impression of the Lynx Arc hi-res Size hi-res: 4519 kb Credits: European Space Agency, NASA and Robert A.E. Fosbury (European Space Agency/Space Telescope-European Coordinating Facility, Germany) Artist’s impression of the Lynx Arc This illustration shows an artist’s impression of the so-called Lynx arc, a newly identified distant super-cluster that contains a million blue-white stars twice as hot as similar stars in our Milky Way galaxy. The Lynx arc is one million times brighter than the well-known Orion Nebula, a nearby prototypical ‘starbirth’ region visible with small telescopes. The stars in the Lynx arc are more than twice as hot as the Orion Nebula’s central stars, with surface temperatures up to 80 000°C. Though there are much bigger and brighter star-forming regions than the Orion Nebula in our local Universe, none are as bright as the Lynx arc, nor do they contain such large numbers of hot stars. The stars are so hot that a very large fraction of their light is emitted in the ultraviolet that makes the gas glow with the green and red colours illustrated here. The so-called Lynx Arc is one million times brighter than the well-known Orion Nebula, a nearby prototypical 'starbirth' region visible with small telescopes. The newly identified super-cluster contains a million blue-white stars that are twice as hot as similar stars in our Milky Way galaxy. It is a rarely glimpsed example of the early days of the Universe where furious firestorms of starbirth blazed across the skies. The spectacular cluster's opulence is dimmed when seen from Earth only by the fact that it is 12 000 million light years away. The discovery of this unique and tantalising object was the result of a systematic study of distant clusters of galaxies carried out with major X-ray, optical and infrared telescopes, including the NASA/ESA Hubble Space Telescope, ROSAT and the Keck Telescopes. Bob Fosbury, of the European Space Agency's Space Telescope

Gastric spiral bacteria in small felids.

Science.gov (United States)

Kinsel, M J; Kovarik, P; Murnane, R D

1998-06-01

Nine small cats, including one bobcat (Felis rufus), one Pallas cat (F. manul), one Canada lynx (F. lynx canadensis), two fishing cats (F. viverrina), two margays (F. wiedii), and two sand cats (F. margarita), necropsied between June 1995 and March 1997 had large numbers of gastric spiral bacteria, whereas five large cats, including one African lion (Panthera leo), two snow leopards (P. uncia), one Siberian tiger (P. tigris altaica), and one jaguar (P. onca), necropsied during the same period had none. All of the spiral organisms from the nine small cats were histologically and ultrastructurally similar. Histologically, the spiral bacteria were 5-14 microm long with five to nine coils per organism and were located both extracellularly within gastric glands and surface mucus, and intracellularly in parietal cells. Spiral bacteria in gastric mucosal scrapings from the Canada lynx, one fishing cat, and the two sand cats were gram negative and had corkscrewlike to tumbling motility when viewed with phase contrast microscopy. The bacteria were 0.5-0.7 microm wide, with a periodicity of 0.65-1.1 microm in all cats. Bipolar sheathed flagella were occasionally observed, and no periplasmic fibrils were seen. The bacteria were extracellular in parietal cell canaliculi and intracellular within parietal cells. Culture of mucosal scrapings from the Canada lynx and sand cats was unsuccessful. Based on morphology, motility, and cellular tropism, the bacteria were probably Helicobacter-like organisms. Although the two margays had moderate lymphoplasmacytic gastritis, the other cats lacked or had only mild gastric lymphoid infiltrates, suggesting that these organisms are either commensals or opportunistic pathogens.

Trans-Boundary Edge Effects in the Western Carpathians: The Influence of Hunting on Large Carnivore Occupancy

Science.gov (United States)

Váňa, Martin; Suchomel, Josef; Chapron, Guillaume; López-Bao, José Vicente

2016-01-01

The conservation and management of wolves Canis lupus in the periphery of their distribution is challenging. Edges of wolf distribution are characterized by very few and intermittent occurrences of individuals, which are modulated by multiple factors affecting the overall population such as human-caused mortality, management targets and food availability. The knowledge of population dynamics in the edges becomes crucial when hunting takes place nearby the edges, which may preclude population expansion. Here, using as example the occurrence of wolves in the Beskydy Mountains (Czech-Slovak border), which are the edge distribution of the wolf and Eurasian lynx Lynx lynx populations in the West Carpathians, we explored how food availability and hunting in the Slovakian core area affected the dynamics of wolves in the edges of this population. During 2003–2012, we monitored large carnivore occurrence by snow-tracking surveys and tested potential differences in the occurrence of these species in Beskydy Mountains and potential mechanisms behind detected patterns. Despite the proximity to the core area, with several wolf reproductions being confirmed at least in recent years, the wolf was a very rare species in Beskydy and was recorded 14 times less often than the lynx. The expected abundance of wolves in the Beskydy Mountains was inversely related to prey availability in the Slovakian core area. Wolf hunting the year before influenced the expected abundance of wolves in Beskydy area. We discuss how different life histories and legal status of both species probably account for most of the observed difference of occurrence at range margins. PMID:28002475

Trans-Boundary Edge Effects in the Western Carpathians: The Influence of Hunting on Large Carnivore Occupancy.

Science.gov (United States)

Kutal, Miroslav; Váňa, Martin; Suchomel, Josef; Chapron, Guillaume; López-Bao, José Vicente

2016-01-01

The conservation and management of wolves Canis lupus in the periphery of their distribution is challenging. Edges of wolf distribution are characterized by very few and intermittent occurrences of individuals, which are modulated by multiple factors affecting the overall population such as human-caused mortality, management targets and food availability. The knowledge of population dynamics in the edges becomes crucial when hunting takes place nearby the edges, which may preclude population expansion. Here, using as example the occurrence of wolves in the Beskydy Mountains (Czech-Slovak border), which are the edge distribution of the wolf and Eurasian lynx Lynx lynx populations in the West Carpathians, we explored how food availability and hunting in the Slovakian core area affected the dynamics of wolves in the edges of this population. During 2003-2012, we monitored large carnivore occurrence by snow-tracking surveys and tested potential differences in the occurrence of these species in Beskydy Mountains and potential mechanisms behind detected patterns. Despite the proximity to the core area, with several wolf reproductions being confirmed at least in recent years, the wolf was a very rare species in Beskydy and was recorded 14 times less often than the lynx. The expected abundance of wolves in the Beskydy Mountains was inversely related to prey availability in the Slovakian core area. Wolf hunting the year before influenced the expected abundance of wolves in Beskydy area. We discuss how different life histories and legal status of both species probably account for most of the observed difference of occurrence at range margins.

FF-EMU: a radiation tolerant ASIC for the distribution of timing, trigger and control signals in the CMS End-Cap Muon detector

International Nuclear Information System (INIS)

Campagnari, C; Costantino, N; Magazzù, G; Tongiani, Claudio

2012-01-01

A radiation tolerant integrated circuit for the distribution of clock, trigger and control signals in the Front-End electronics of the CMS End-Cap Muon detector has been developed in the IBM CMOS 130nm technology. The circuit houses transmitter and receiver interfaces to serial links implementing the FF-LYNX protocol that allows the integrated transmission of triggers and data frames with different latency constraints. Encoder and decoder modules associate signal transitions to FF-LYNX frames. The system and the ASIC architecture and behavior and the results of test and characterization of the ASIC prototypes will be presented.

A High Resolution, Light-Weight, Synthetic Aperture Radar for UAV Application

International Nuclear Information System (INIS)

Doerry, A.W.; Hensley, W.H.; Stence, J.; Tsunoda, S.I.; Pace, F.; Walker, B.C.; Woodring, M.

1999-06-01

(U) Sandia National Laboratories in collaboration with General Atomics (GA) has designed and built a high resolution, light-weight, Ku-band Synthetic Aperture Radar (SAR) known as ''Lynx''. Although Lynx can be operated on a wide variety of manned and unmanned platforms, its design is optimized for use on medium altitude Unmanned Aerial Vehicles (UAVS). In particular, it can be operated on the Predator, I-GNAT, and Prowler II platforms manufactured by GA. (U) The radar production weight is less than 120 lb and operates within a 3 GHz band from 15.2 GHz to 18.2 GHz with a peak output power of 320 W. Operating range is resolution and mode dependent but can exceed 45 km in adverse weather (4 mm/hr rain). Lynx has operator selectable resolution and is capable of 0.1 m resolution in spotlight mode and 0.3 m resolution in strip map mode, over substantial depression angles (5 to 60 deg) and squint angles (broadside and ±45 deg). Real-time Motion Compensation is implemented to allow high-quality image formation even during vehicle turns and other maneuvers

EARLY-TYPE GALAXIES AT z = 1.3. I. THE LYNX SUPERCLUSTER: CLUSTER AND GROUPS AT z = 1.3. MORPHOLOGY AND COLOR-MAGNITUDE RELATION

International Nuclear Information System (INIS)

Mei, Simona; Raichoor, Anand; Huertas-Company, Marc; Adam Stanford, S.; Rettura, Alessandro; Jee, Myungkook J.; Holden, Brad P.; Illingworth, Garth D.; Postman, Marc; Nakata, Fumiaki; Kodama, Tadayuki; Finoguenov, Alexis; Ford, Holland C.; Rosati, Piero; Tanaka, Masayuki; Koyama, Yusei; Shankar, Francesco; Carrasco, Eleazar R.; Demarco, Ricardo; Eisenhardt, Peter

2012-01-01

We confirm the detection of three groups in the Lynx supercluster, at z ≈ 1.3, through spectroscopic follow-up and X-ray imaging, and we give estimates for their redshifts and masses. We study the properties of the group galaxies compared to the two central clusters, RX J0849+4452 and RX J0848+4453. Using spectroscopic follow-up and multi-wavelength photometric redshifts, we select 89 galaxies in the clusters, of which 41 are spectroscopically confirmed, and 74 galaxies in the groups, of which 25 are spectroscopically confirmed. We morphologically classify galaxies by visual inspection, noting that our early-type galaxy (ETG) sample would have been contaminated at the 30%-40% level by simple automated classification methods (e.g., based on Sérsic index). In luminosity-selected samples, both clusters and groups show high fractions of bulge-dominated galaxies with a diffuse component that we visually identified as a disk and which we classified as bulge-dominated spirals, e.g., Sas. The ETG fractions never rise above ≈50% in the clusters, which is low compared to the fractions observed in other massive clusters at z ≈ 1. In the groups, ETG fractions never exceed ≈25%. However, overall bulge-dominated galaxy fractions (ETG plus Sas) are similar to those observed for ETGs in clusters at z ∼ 1. Bulge-dominated galaxies visually classified as spirals might also be ETGs with tidal features or merger remnants. They are mainly red and passive, and span a large range in luminosity. Their star formation seems to have been quenched before experiencing a morphological transformation. Because their fraction is smaller at lower redshifts, they might be the spiral population that evolves into ETGs. For mass-selected samples of galaxies with masses M > 10 10.6 M ☉ within Σ > 500 Mpc –2 , the ETG and overall bulge-dominated galaxy fractions show no significant evolution with respect to local clusters, suggesting that morphological transformations might occur at lower

Daily activity patterns of large and medium-sized mammals based on camera traps data in the Central Forest Nature Reserve, Valdai Upland, Russia

Directory of Open Access Journals (Sweden)

Sergey S. Ogurtsov

2018-06-01

Full Text Available Here are presented the results of the analysis of daily activity patterns obtained from the data of camera traps for five large mammals (elk Alces alces, wild boar Sus scrofa, brown bear Ursus arctos, grey wolf Canis lupus, Eurasian lynx Lynx lynx and three medium ones (European badger Meles meles, raccoon dog Nyctereutes procyonoides, mountain hare Lepus timidus for the territory of the Central Forest Nature Reserve, Valdai Upland, Russia. Data were collected in the period 2010–2017 and the trap effort was 30 158 camera days from 21 locations. Most of the mammals surveyed showed activity at night and twilight hours (71% of the pictures. The hare was most active among all and dominant at night. In many respects it is similar to the activity of a raccoon dog, which type can be defined as nocturnal too. Unlike a hare, a raccoon dog has a weak peak in the daytime and less activity in the night. Badgers movements are confined to the twilight and nighttime. The share of nocturnal activity of large ungulates such as elk and wild boar was approximately the same and amounted to about 45% of all registrations. The wild boar is slightly more active during the day and in the evening and is not active at all in the morning. The elk is active in the morning, and in the daytime and to a lesser extent in the evening. The lynx and the bear have similar cathemeral activity patterns: almost half of all their meetings occurred at daylight hours and only slightly – less than 40% – at night. The brown bear had the maximum number of registrations in the daytime among all the studied species. Despite the fact that the main object of lynx feeding in the reserve is the hare, there was no high degree of overlap between them (γˆ = 0.75. In the group of large carnivores, the wolf was noticeably distinguished, more than half of its registrations were at night, and a third – on daytime. Daily activities of the wolf and its main prey elk showed a large overlap (�

Conservation challenges of managing lynx

Science.gov (United States)

John R. Squires

2005-01-01

Yellowstone National Park is hallowed ground when it comes to wildlife in America. The very word “Yellowstone” conjures up images of grizzly bears digging tubers, bands of elk dotting the landscape, and gray wolves pursuing elk along the Lamar River. However, Yellowstone also provides habitat to one of the rarest cats in the continental United States: the...

Real-time Linux operating system for plasma control on FTU--implementation advantages and first experimental results

International Nuclear Information System (INIS)

Vitale, V.; Centioli, C.; Iannone, F.; Mazza, G.; Panella, M.; Pangione, L.; Podda, S.; Zaccarian, L.

2004-01-01

In this paper, we report on the experiment carried out at the Frascati Tokamak Upgrade (FTU) on the porting of the plasma control system (PCS) from a LynxOS architecture to an open source Linux real-time architecture. The old LynxOS system was implemented on a VME/PPC604r embedded controller guaranteeing successful plasma position, density and current control. The new RTAI-Linux operating system has shown to easily adapt to the VME hardware via a VME/INTELx86 embedded controller. The advantages of the new solution versus the old one are not limited to the reduced cost of the new architecture (based on the open-source characteristic of the RTAI architecture) but also enhanced by the response time of the real-time system which, also through an optimization of the real-time code, has been reduced from 150 μs (LynxOS) to 70 μs (RTAI). The new real-time operating system is also shown to be suitable for new extended control activities, whose implementation is also possible based on the reduced duty cycle duration, which leaves space for the real-time implementation of nonlinear control laws. We report here on recent experiments related to the optimization of the coupling between additional radiofrequency power and plasma

Real-time Linux operating system for plasma control on FTU--implementation advantages and first experimental results

Energy Technology Data Exchange (ETDEWEB)

Vitale, V. E-mail: vitale@frascati.enea.it; Centioli, C.; Iannone, F.; Mazza, G.; Panella, M.; Pangione, L.; Podda, S.; Zaccarian, L

2004-06-01

In this paper, we report on the experiment carried out at the Frascati Tokamak Upgrade (FTU) on the porting of the plasma control system (PCS) from a LynxOS architecture to an open source Linux real-time architecture. The old LynxOS system was implemented on a VME/PPC604r embedded controller guaranteeing successful plasma position, density and current control. The new RTAI-Linux operating system has shown to easily adapt to the VME hardware via a VME/INTELx86 embedded controller. The advantages of the new solution versus the old one are not limited to the reduced cost of the new architecture (based on the open-source characteristic of the RTAI architecture) but also enhanced by the response time of the real-time system which, also through an optimization of the real-time code, has been reduced from 150 {mu}s (LynxOS) to 70 {mu}s (RTAI). The new real-time operating system is also shown to be suitable for new extended control activities, whose implementation is also possible based on the reduced duty cycle duration, which leaves space for the real-time implementation of nonlinear control laws. We report here on recent experiments related to the optimization of the coupling between additional radiofrequency power and plasma.

Florida DOT Orlando ITS World Congress Vehicle Awareness Device

Data.gov (United States)

Department of Transportation — Florida DOT (FDOT) installed Vehicle Awareness Devices (VADs) on a set of Lynx transit buses as part of a demonstration for the ITS World Congress held in Orlando in...

New Platforms for Suborbital Astronomical Observations and In Situ Atmospheric Measurements: Spacecraft, Instruments, and Facilities

Science.gov (United States)

Rodway, K.; DeForest, C. E.; Diller, J.; Vilas, F.; Sollitt, L. S.; Reyes, M. F.; Filo, A. S.; Anderson, E.

2014-12-01

Suborbital astronomical observations have over 50 years' history using NASA's sounding rockets and experimental space planes. The new commercial space industry is developing suborbital reusable launch vehicles (sRLV's) to provide low-cost, flexible, and frequent access to space at ~100 km altitude. In the case of XCOR Aerospace's Lynx spacecraft, the vehicle design and capabilities work well for hosting specially designed experiments that can be flown with a human-tended researcher or alone with the pilot on a customized mission. Some of the first-generation instruments and facilities that will conduct solar observations on dedicated Lynx science missions include the SwRI Solar Instrument Pointing Platform (SSIPP) and Atsa Suborbital Observatory, as well as KickSat sprites, which are picosatellites for in situ atmospheric and solar phenomena measurements. The SSIPP is a demonstration two-stage pointed solar observatory that operates inside the Lynx cockpit. The coarse pointing stage includes the pilot in the feedback loop, and the fine stage stabilizes the solar image to achieve arcsecond class pointing. SSIPP is a stepping-stone to future external instruments that can operate with larger apertures and shorter wavelengths in the solar atmosphere. The Planetary Science Institute's Atsa Suborbital Observatory combines the strengths of ground-based observatories and space-based observing to create a facility where a telescope is maintained and used interchangeably with either in-house facility instruments or user-provided instruments. The Atsa prototype is a proof of concept, hand-guided camera that mounts on the interior of the Lynx cockpit to test target acquisition and tracking for human-operated suborbital astronomy. KickSat sprites are mass-producible, one inch printed circuit boards (PCBs) populated by programmable off the shelf microprocessors and radios for real time data transmission. The sprite PCBs can integrate chip-based radiometers, magnetometers

The Atsa Suborbital Observatory: An Observatory for a Commercial Suborbital Spacecraft

Science.gov (United States)

Vilas, F.; Sollitt, L. S.

2012-12-01

instruments or user-provided instruments. Rapid turnaround will depend only on flight frequency. Data are stored on-board for retrieval when the spacecraft lands. We provide robust instrumentation that can survive suborbital spaceflight, assessment of the feasibility of the requested observations, rigorous scripting of the telescope operation, integration of the telescope plus instrument in a provider spacecraft, and periodic preventive maintenance for the telescope and instrument suite. XCOR Aerospace's Lynx III spacecraft is the best candidate vehicle to host a suborbital astronomical observatory. Unlike other similar vehicles, the Lynx will operate with only 1 or 2 people onboard (the pilot and an operator), allowing for each mission to be totally dedicated to the observation (no tourists will be bumping about; no other experiments will affect spacecraft pointing). A stable platform, the Lynx can point to an accuracy of ± 0.5o. Fine pointing is done by the telescope system. Best of all, the Lynx has a dorsal pod that opens directly to space. For astronomical observations, the best window is NO window. Currently, we plan to deploy a 20" diameter telescope in the Lynx III dorsal pod. XCOR Aerospace has the goal of eventually maintaining a Lynx flight frequency capability of 4 times/day. As with any observatory, Atsa will be available for observations by the community at large.

Cytauxzoon Infections in Wild Felids from Carpathian-Danubian-Pontic Space: Further Evidence for a Different Cytauxzoon Species in European Felids

Czech Academy of Sciences Publication Activity Database

Gallusová, M.; Jirsová, D.; Mihalca, A. D.; Gherman, C.M.; D’Amico, G.; Qablan, M. A.; Modrý, David

2016-01-01

Roč. 102, č. 3 (2016), s. 377-380 ISSN 0022-3395 Institutional support: RVO:60077344 Keywords : Lynx * domestic cats * molecular characterization Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.326, year: 2016

Sarcoptic mange in Swedish wildlife.

Science.gov (United States)

Mörner, T

1992-12-01

Mange caused by Sarcoptes scabiei var. vulpes appeared among red foxes (Vulpes vulpes) in Scandinavia (south-west Finland) for the first time in this century in 1967. The disease was most probably introduced by foxes crossing the Gulf of Finland from Estonia. The mange epizootic spread northwards through Finland and reached Sweden in late 1975, when mangy foxes appeared in the northern part of the country. In 1984, mange was observed in most parts of Sweden. The disease was observed to spread rapidly in boreal areas, whereas it spread more slowly in agricultural areas. Mortality due to mange was very high. The duration of the disease before death due to emaciation has been shown experimentally to be over 90 days. An outbreak of fox mange among Arctic foxes (Alopex lagopus) occurred in 1986. The local population of Arctic foxes was caught and successfully treated. The following year, treated foxes were caught again and no signs of disease were found. Sporadic cases of fox mange have also been diagnosed in lynx (Lynx lynx), pine marten (Martes martes) and domestic dogs. Single cases have been observed in other species: wolf (Canis lupus), mountain hare (Lepus timidus), domestic cat and horse. No cases of sarcoptic mange have been recorded in the badger (Meles meles). At present, although fox mange occurs as an epizootic in local populations, the number of foxes has increased again in many parts of Sweden.

High-Redshift Radio Galaxies from Deep Fields

Indian Academy of Sciences (India)

2016-01-27

Jan 27, 2016 ... High-Redshift Radio Galaxies from Deep Fields ... Here we present results from the deep 150 MHz observations of LBDS-Lynx field, which has been imaged at 327, ... Articles are also visible in Web of Science immediately.

10 lineas de investigacion para empezar el curso Del big bang del proyecto LHC a la polipildora de Valentin Fuster

CERN Multimedia

2007-01-01

The entrails of the universe, the keys of the biological clock, diseases like Alzheimer and the processes that govern our brain, the mother celles, the physic of materials, the survival of the lynx, the fight against cancer, etc...(2,5 pages)

Monitoring velkých šelem v Beskydech

Czech Academy of Sciences Publication Activity Database

Koubek, Petr; Barančeková, Miroslava; Krojerová, Jarmila; Homolka, Miloslav; Konupka, Petr; Vallo, Peter

2013-01-01

Roč. 14, č. 6 (2013), s. 12-15 ISSN 1212-8422 R&D Projects: GA MŠk EE2.3.35.0026 Institutional support: RVO:68081766 Keywords : European lynx * brown bear * wolf * telemetry * camera-traps * monitoring Subject RIV: EG - Zoology

Functional interaction between Lypd6 and nicotinic acetylcholine receptors

DEFF Research Database (Denmark)

Arvaniti, Maria; Jensen, Majbrit M; Soni, Neeraj

2016-01-01

Nicotinic acetylcholine receptors (nAChRs) affect multiple physiological functions in the brain and their functions are modulated by regulatory proteins of the Lynx family. Here, we report for the first time a direct interaction of the Lynx protein LY6/PLAUR domain-containing 6 (Lypd6) with n...... brain. Additionally, soluble recombinant Lypd6 protein attenuates nicotine-induced hippocampal inward currents in rat brain slices and decreases nicotine-induced extracellular signal-regulated kinase phosphorylation in PC12 cells, suggesting that binding of Lypd6 is sufficient to inhibit n......AChR-mediated intracellular signaling. We further show that perinatal nicotine exposure in rats (4 mg/kg/day through minipumps to dams from embryonic day 7 to post-natal day 21) significantly increases Lypd6 protein levels in the hippocampus in adulthood, which did not occur after exposure to nicotine in adulthood only. Our...

Emergence of canine distemper virus strains with modified molecular signature and enhanced neuronal tropism leading to high mortality in wild carnivores.

Science.gov (United States)

Origgi, F C; Plattet, P; Sattler, U; Robert, N; Casaubon, J; Mavrot, F; Pewsner, M; Wu, N; Giovannini, S; Oevermann, A; Stoffel, M H; Gaschen, V; Segner, H; Ryser-Degiorgis, M-P

2012-11-01

An ongoing canine distemper epidemic was first detected in Switzerland in the spring of 2009. Compared to previous local canine distemper outbreaks, it was characterized by unusually high morbidity and mortality, rapid spread over the country, and susceptibility of several wild carnivore species. Here, the authors describe the associated pathologic changes and phylogenetic and biological features of a multiple highly virulent canine distemper virus (CDV) strain detected in and/or isolated from red foxes (Vulpes vulpes), Eurasian badgers (Meles meles), stone (Martes foina) and pine (Martes martes) martens, from a Eurasian lynx (Lynx lynx), and a domestic dog. The main lesions included interstitial to bronchointerstitial pneumonia and meningopolioencephalitis, whereas demyelination--the classic presentation of CDV infection--was observed in few cases only. In the brain lesions, viral inclusions were mainly in the nuclei of the neurons. Some significant differences in brain and lung lesions were observed between foxes and mustelids. Swiss CDV isolates shared together with a Hungarian CDV strain detected in 2004. In vitro analysis of the hemagglutinin protein from one of the Swiss CDV strains revealed functional and structural differences from that of the reference strain A75/17, with the Swiss strain showing increased surface expression and binding efficiency to the signaling lymphocyte activation molecule (SLAM). These features might be part of a novel molecular signature, which might have contributed to an increase in virus pathogenicity, partially explaining the high morbidity and mortality, the rapid spread, and the large host spectrum observed in this outbreak.

Carnivore-caused livestock mortality in Trans-Himalaya.

Science.gov (United States)

Namgail, Tsewang; Fox, Joseph L; Bhatnagar, Yash Veer

2007-04-01

The loss of livestock to wild predators is an important livelihood concern among Trans-Himalayan pastoralists. Because of the remoteness and inaccessibility of the region, few studies have been carried out to quantify livestock depredation by wild predators. In the present study, we assessed the intensity of livestock depredation by snow leopard Uncia uncia, Tibetan wolf Canis lupus chanku, and Eurasian lynx Lynx l. isabellina in three villages, namely Gya, Rumtse, and Sasoma, within the proposed Gya-Miru Wildlife Sanctuary in Ladakh, India. The three villages reported losses of 295 animals to these carnivores during a period of 2.5 years ending in early 2003, which represents an annual loss rate of 2.9% of their livestock holdings. The Tibetan wolf was the most important predator, accounting for 60% of the total livestock loss because of predation, followed by snow leopard (38%) and lynx (2%). Domestic goat was the major victim (32%), followed by sheep (30%), yak (15%), and horse (13%). Wolves killed horses significantly more and goats less than would be expected from their relative abundance. Snow leopards also killed horses significantly more than expected, whereas they killed other livestock types in proportion to their abundance. The three villages combined incurred an estimated annual monetary loss of approximately $USD 12,120 amounting to approximately $USD 190/household/y. This relatively high total annual loss occurred primarily because of depredation of the most valuable livestock types such as yak and horse. Conservation actions should initially attempt to target decrease of predation on these large and valuable livestock species.

Seroprevalences of antibodies to Neospora caninum and Toxoplasma gondii in zoo animals.

Science.gov (United States)

Sedlák, K; Bártová, E

2006-03-31

Neospora caninum is an apicomplexan parasite that causes neuromuscular disease in dogs and abortions in cattle. Little is known about the prevalence of antibodies to this parasite in zoo animals. Sera from 556 animals, from 13 Czech and Slovak zoos were tested for antibodies to N. caninum and Toxoplasma gondii by indirect fluorescent antibody test. Antibodies to N. caninum were found in 31 of 556 zoo animals (5.6%), representing 18 of 114 species tested: Eurasian wolf (Canis lupus lupus), Maned wolf (Chrysocyon brachyurus), fennec (Vulpes zerda), cheetah (Acinonyx jubatus), jaguarundi (Herpailurus yaguarondi), Eurasian lynx (Lynx lynx), Indian lion (Panthera leo goojratensis), fisher (Martes pennanti), blackbuck (Antilope cervicapra), European bison (Bison bonasus), lechwe (Kobus leche), African buffalo (Syncerus caffer caffer), eland (Taurotragus oryx), sitatunga (Tragelaphus spekei gratus), Thorold's deer (Cervus albirostris), Eastern elk (C. elaphus canadensis), Vietnam sika deer (C. nippon pseudaxis) and Père David's deer (Elaphurus davidianus). Titres ranged from 1:40 to 1:2560. The highest prevalence 50% was found in family mustelidae of the order carnivora. Antibodies to T. gondii were detected in 193 of 556 zoo animals (34.7%) representing 72 of 114 species tested, with titres ranging from 1:40 to 1:40960. The highest prevalence 100% was found in families: hyaenidae, mustelidae, ursidae and viveridae of the order carnivora. The results of this study indicate that zoo animals have more exposure to T. gondii than to N. caninum. It is the first report of seroprevalence of antibodies to N. caninum in European zoo animals.

78 FR 17632 - Caribou-Targhee National Forest; Idaho and Wyoming; Amendment to the Targhee Revised Forest Plan...

Science.gov (United States)

2013-03-22

...; Amendment to the Targhee Revised Forest Plan--Canada Lynx Habitat AGENCY: Forest Service, USDA. ACTION... Forest proposes to amend the Targhee Revised Forest Plan (1997) to include a map identifying specific... Administrative Review Process: The decision on this proposed plan amendment will be subject to the objection...

Usefulness of the wildlife species as a focal species in the forest ...

African Journals Online (AJOL)

yasinucarlı

2011-03-14

Mar 14, 2011 ... keystone species are the most important species in that ecosystems to sustainability. ... bear, Wolf and Eurasian Lynx can be also used as a flagship, indicator and ... Washington's Pacific coast. ... sidered keystones because their effect is not dispro- ..... conservation of South American terrestrial mammals.

Temporal Loss of Tsc1: Neural Development and Brain Disease in Tuberous Sclerosis

Science.gov (United States)

2014-06-01

recorded using a Cheetah Data Acquisition System (NeuraLynx). The probe was lowered 1,600 mm and responses to vibrissa deflections confirmed electrode...Local field potential (LFP) signals were sampled (30303 Hz), filtered (0.9 to 9000 Hz), and recorded using a Cheetah Data Acquisition System

Bovine Tuberculosis (Mycobacterium bovis) in Wildlife in Spain

Science.gov (United States)

Aranaz, Alicia; de Juan, Lucía; Montero, Natalia; Sánchez, Celia; Galka, Margarita; Delso, Consuelo; Álvarez, Julio; Romero, Beatriz; Bezos, Javier; Vela, Ana I.; Briones, Victor; Mateos, Ana; Domínguez, Lucas

2004-01-01

Mycobacterium bovis infection in wildlife and feral species is a potential source of infection for livestock and a threat to protected and endangered species. The aim of this study was to identify Spanish wild animal species infected with M. bovis through bacteriological culture and spacer oligonucleotide typing (spoligotyping) of isolates for epidemiological purposes. This study included samples from red deer (Cervus elaphus), fallow deer (Dama dama), wild boar (Sus scrofa), Iberian lynx (Lynx pardina), hare (Lepus europaeus), and cattle (Bos taurus). They were collected in several geographical areas that were selected for their unique ecological value and/or known relationships between wildlife and livestock. In the areas included in this survey, M. bovis strains with the same spoligotyping pattern were found infecting several wild species and livestock, which indicates an epidemiological link. A locally predominant spoligotype was found in these areas. Better understanding of the transmission and distribution of disease in these populations will permit more precise targeting of control measures. PMID:15184440

77 FR 75646 - Kenai National Wildlife Refuge, Soldotna, AK; Draft Environmental Impact Statement for the...

Science.gov (United States)

2012-12-21

... intermingled with hundreds of lakes. Boreal forests are home to moose, wolves, black and brown bears, lynx... FXRS12650700000] 123 Kenai National Wildlife Refuge, Soldotna, AK; Draft Environmental Impact Statement for the... . Send your comments or requests for information by any one of the following methods: Email: fw7_kenai...

78 FR 32270 - Kenai National Wildlife Refuge, Soldotna, AK; Environmental Impact Statement for the Shadura...

Science.gov (United States)

2013-05-29

... and brown bears, lynx, snowshoe hares, and numerous species of Neotropical birds, such as olive-sided... FXRS12650700000 123] Kenai National Wildlife Refuge, Soldotna, AK; Environmental Impact Statement for the Shadura...: EMail: fw7_kenai[email protected] ; Fax: Attn: Peter Wikoff, (907) 786-3976; U.S. Mail: Peter Wikoff...

Dietary items as possible sources of "1"3"7Cs in large carnivores in the Gorski Kotar forest ecosystem, Western Croatia

International Nuclear Information System (INIS)

Šprem, Nikica; Piria, Marina; Barišić, Domagoj; Kusak, Josip; Barišić, Delko

2016-01-01

The mountain forest ecosystem of Gorski Kotar is distant from any significant sources of environmental pollution, though recent findings have revealed that this region is among the most intense "1"3"7Cs contaminated area in Croatia. Therefore, the aim of this study was to investigate "1"3"7Cs and "4"0K load in three large predator species in the mountain forest ecosystem. Radionuclides mass activities were determined by the gamma-spectrometric method in the muscle tissue of brown bear (47), wolf (7), lynx (1) and golden jackal (2). The highest "1"3"7Cs mass activity was found in lynx (153 Bq kg"−"1), followed by brown bear (132 Bq kg"−"1), wolf (22.2 Bq kg"−"1), and golden jackal (2.48 Bq kg"−"1). Analysis of 63 samples of dietary items suggests that they are not all potentially dominant sources of "1"3"7Cs for wildlife. The most important source of radionuclides for the higher parts of the food-chain from the study area were found to be the mushroom species wood hedgehog (Hydnum repandum), with a transfer factor TF of 5.166, and blueberry (Vaccinium myrtillus) as a plant species (TF = 2.096). Food items of animal origin indicated higher mass activity of radionuclides and therefore are possible moderate bioindicators of environmental pollution. The results also revealed that possible unknown wild animal food sources are a caesium source in the study region, and further study is required to illuminate this issue. - Highlights: • Radionuclide mass activities were determined by the gamma-spectrometric method. • The highest "1"3"7Cs mass activity in brown bear was 132, wolf 22.2 and lynx 153 Bq kg"−"1. • The best bioindicators are a wood hedgehog (TF = 5.166) and blueberry (TF = 2.096).

Dietary items as possible sources of {sup 137}Cs in large carnivores in the Gorski Kotar forest ecosystem, Western Croatia

Energy Technology Data Exchange (ETDEWEB)

Šprem, Nikica, E-mail: nsprem@agr.hr [University of Zagreb, Faculty of Agriculture, Department of Fisheries, Beekeeping, Game Management and Special Zoology, Svetošimunska cesta 25, 10000 Zagreb (Croatia); Piria, Marina; Barišić, Domagoj [University of Zagreb, Faculty of Agriculture, Department of Fisheries, Beekeeping, Game Management and Special Zoology, Svetošimunska cesta 25, 10000 Zagreb (Croatia); Kusak, Josip [University of Zagreb, Veterinary Faculty, Department of Biology, Heinzelova 55, 10000 Zagreb (Croatia); Barišić, Delko [Laboratory for Radioecology, Centre for Marine and Environmental Research, Ruđer Bošković Institute, PO Box 160, Bijenička 54, 10002 Zagreb (Croatia)

2016-01-15

The mountain forest ecosystem of Gorski Kotar is distant from any significant sources of environmental pollution, though recent findings have revealed that this region is among the most intense {sup 137}Cs contaminated area in Croatia. Therefore, the aim of this study was to investigate {sup 137}Cs and {sup 40}K load in three large predator species in the mountain forest ecosystem. Radionuclides mass activities were determined by the gamma-spectrometric method in the muscle tissue of brown bear (47), wolf (7), lynx (1) and golden jackal (2). The highest {sup 137}Cs mass activity was found in lynx (153 Bq kg{sup −1}), followed by brown bear (132 Bq kg{sup −1}), wolf (22.2 Bq kg{sup −1}), and golden jackal (2.48 Bq kg{sup −1}). Analysis of 63 samples of dietary items suggests that they are not all potentially dominant sources of {sup 137}Cs for wildlife. The most important source of radionuclides for the higher parts of the food-chain from the study area were found to be the mushroom species wood hedgehog (Hydnum repandum), with a transfer factor TF of 5.166, and blueberry (Vaccinium myrtillus) as a plant species (TF = 2.096). Food items of animal origin indicated higher mass activity of radionuclides and therefore are possible moderate bioindicators of environmental pollution. The results also revealed that possible unknown wild animal food sources are a caesium source in the study region, and further study is required to illuminate this issue. - Highlights: • Radionuclide mass activities were determined by the gamma-spectrometric method. • The highest {sup 137}Cs mass activity in brown bear was 132, wolf 22.2 and lynx 153 Bq kg{sup −1}. • The best bioindicators are a wood hedgehog (TF = 5.166) and blueberry (TF = 2.096).

Game statistics for the island of Olkiluoto in 2013-2014

International Nuclear Information System (INIS)

Niemi, M.; Nieminen, M.

2015-05-01

The game statistics for the island of Olkiluoto were updated in the summer 2014 and compared with earlier statistics. In addition, the estimated biomass of hunted animals was calculated. The reported game bag and population size estimates are based on the annual action report of local hunting club (Olkiluodon Metsaestysseura ry) and interviews of hunting club's secretary. No moose or deer inventories were made in the winter 2013-2014. The moose population has been a slightly increasing when comparing the previous year; there were 4-6 individuals on the island after hunting season. The number of moose varies because they tend to move between the island and mainland. Winter 2013-2014 was relatively easy for white-tailed deer and roe deer but the predation caused by lynxes inhibits the increase of populations. However, the current amount of lynxes on the island is unknown because the lack of snow in the winter 2013-2014. In the summer of 2014, there were several lynx observations. The number of hunted raccoon dogs was almost four times as large as in the previous year; altogether 26 individuals were killed. There were no noticeable changes in the number of other hunted small or medium-sized predators. American minks were not killed at all. The total number of hunted hares decreased from eleven to seven. Once again, mallard was the most common hunted bird species followed by hooded crow. Other bird species hunted were wood pigeon, herring gull, hazel grouse, wigeon, teal and common pochard. The total biomass hunted was approximately 1 225 kilos (1 170 for mammals and 55 for birds) which was 305 kilos more than in the previous year. The biomass destined to human consumption (i.e. game meat) was approximately 415 kilos (400 kilos for mammals, 15 for birds). (orig.)

Game statistics for the island of Olkiluoto in 2013-2014

Energy Technology Data Exchange (ETDEWEB)

Niemi, M.; Nieminen, M. [Faunatica Oy, Espoo (Finland)

2015-05-15

The game statistics for the island of Olkiluoto were updated in the summer 2014 and compared with earlier statistics. In addition, the estimated biomass of hunted animals was calculated. The reported game bag and population size estimates are based on the annual action report of local hunting club (Olkiluodon Metsaestysseura ry) and interviews of hunting club's secretary. No moose or deer inventories were made in the winter 2013-2014. The moose population has been a slightly increasing when comparing the previous year; there were 4-6 individuals on the island after hunting season. The number of moose varies because they tend to move between the island and mainland. Winter 2013-2014 was relatively easy for white-tailed deer and roe deer but the predation caused by lynxes inhibits the increase of populations. However, the current amount of lynxes on the island is unknown because the lack of snow in the winter 2013-2014. In the summer of 2014, there were several lynx observations. The number of hunted raccoon dogs was almost four times as large as in the previous year; altogether 26 individuals were killed. There were no noticeable changes in the number of other hunted small or medium-sized predators. American minks were not killed at all. The total number of hunted hares decreased from eleven to seven. Once again, mallard was the most common hunted bird species followed by hooded crow. Other bird species hunted were wood pigeon, herring gull, hazel grouse, wigeon, teal and common pochard. The total biomass hunted was approximately 1 225 kilos (1 170 for mammals and 55 for birds) which was 305 kilos more than in the previous year. The biomass destined to human consumption (i.e. game meat) was approximately 415 kilos (400 kilos for mammals, 15 for birds). (orig.)

Chapter 6: The scientific basis for conserving forest carnivores: considerations for management

Science.gov (United States)

L. Jack Lyon; Keith B. Aubry; William J. Zielinski; Steven W. Buskirk; Leonard F. Ruggiero

1994-01-01

The reviews presented in previous chapters reveal substantial gaps in our knowledge about marten, fisher, lynx, and wolverine. These gaps severely constrain our ability to design reliable conservation strategies. This problem will be explored in depth in Chapter 7. In this chapter, our objective is to discuss management considerations resulting from what we currently...

A rapid field test for sylvatic plague exposure in wild animals

Science.gov (United States)

Abbott, Rachel C.; Hudak, Robert; Mondesire, Roy; Baeten, Laurie A.; Russell, Robin E.; Rocke, Tonie E.

2014-01-01

Plague surveillance is routinely conducted to predict future epizootics in wildlife and exposure risk for humans. The most common surveillance method for sylvatic plague is detection of antibodies to Yersinia pestis F1 capsular antigen in sentinel animals, such as coyotes (Canis latrans). Current serologic tests for Y. pestis, hemagglutination (HA) test and enzyme-linked immunosorbent assay (ELISA), are expensive and labor intensive. To address this need, we developed a complete lateral flow device for the detection of specific antibodies to Y. pestis F1 and V antigens. Our test detected anti-F1 and anti-V antibodies in serum and Nobuto filter paper samples from coyotes, and in serum samples from prairie dogs (Cynomys ludovicianus), lynx (Lynx canadensis), and black-footed ferrets (Mustela nigripes). Comparison of cassette results for anti-F1 and anti-V antibodies with results of ELISA or HA tests showed correlations ranging from 0.68 to 0.98. This device provides an affordable, user-friendly tool that may be useful in plague surveillance programs and as a research tool.

XCOR, developing the next generation spaceplane

CERN Document Server

2016-01-01

Employing the same informational approach Erik Seedhouse used in "SpaceX" and "Bigelow Aerospace", this new book familiarizes space enthusiasts with the company XCOR Aerospace and examines the design of the two-seater Lynx. The new spaceplane's low weight and high octane fuel confer important advantages, such as direct runway launches and the ability to fly several times per day. Over the last 15 years, XCOR has developed and built 13 different rocket engines, built and flown two manned rocket-powered aircraft and has accumulated over 4,000 engine firings and nearly 500 minutes of run time on their engines.  This book serves as a go-to reference guide for suborbital scientists and those seeking to learn how one company has found success. Additionally, it describes the medical and training requirements for those flying on board the Lynx and the related critical roles of the astronaut trainers and a new breed of commercial space pilots. The end result is a thorough chronicle of the development o...

Abundance and food habits of cougars and bobcats in the Sierra San Luis, Sonora, Mexico

Science.gov (United States)

Hugo Luna Soria; Carlos A. Lopez Gonzalez

2005-01-01

Cougars (Puma concolor) and bobcats (Lynx rufus) are present throughout the Sky Islands of the Sonoran desert. We determined the abundance and food habits in northeastern Sonora, Mexico. Abundance indicated that cougars were common (4.19±5.57 cougars/100 km2 and 0.05±0.05 scats/km). According to the scat index, bobcats were more...

Installation and management of the SPS and LEP control system computers

International Nuclear Information System (INIS)

Bland, Alastair

1994-01-01

Control of the CERN SPS and LEP accelerators and service equipment on the two CERN main sites is performed via workstations, file servers, Process Control Assemblies (PCAs) and Device Stub Controllers (DSCs). This paper describes the methods and tools that have been developed to manage the file servers, PCAs and DSCs since the LEP startup in 1989. There are five operational DECstation 5000s used as file servers and boot servers for the PCAs and DSCs. The PCAs consist of 90 SCO Xenix 386 PCs, 40 LynxOS 486 PCs and more than 40 older NORD 100s. The DSCs consist of 90 OS-968030 VME crates and 10 LynxOS 68030 VME crates. In addition there are over 100 development systems. The controls group is responsible for installing the computers, starting all the user processes and ensuring that the computers and the processes run correctly. The operators in the SPS/LEP control room and the Services control room have a Motif-based X window program which gives them, in real time, the state of all the computers and allows them to solve problems or reboot them. ((orig.))

Game statistics for the Island of Olkiluoto in 2011-2012

Energy Technology Data Exchange (ETDEWEB)

Niemi, M.; Nieminen, M. [Faunatica Oy, Espoo (Finland); Jussila, I. [Turku Univ. (Finland)

2012-11-15

The game statistics for the island of Olkiluoto were updated in the summer 2012 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2011-2012. The moose population has been decreasing slightly during the past ten years. The increasing lynx population has decreasing effect on small ungulate (white-tailed deer and roe deer) populations. The number of hunted mountain hares and European brown hares decreased when comparing the previous year. In addition, the number of hunted raccoon dogs was about 50 per cent lower than in the year 2010. Altogether 27 waterfowls were hunted in 2011. The population of mountain hare is abundant, despite that there were lynx living on the eastern part of island during the winter 2011. Based on track observations, there are pine martens living on the area as well. In addition, there were some observations of wolves visiting on the area. The winter 2011-2012 was milder than the previous one, and it seemed that young swans wintering on the area survived better that in the previous winter. (orig.)

Game statistics for the Island of Olkiluoto in 2011-2012

International Nuclear Information System (INIS)

Niemi, M.; Nieminen, M.; Jussila, I.

2012-11-01

The game statistics for the island of Olkiluoto were updated in the summer 2012 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2011-2012. The moose population has been decreasing slightly during the past ten years. The increasing lynx population has decreasing effect on small ungulate (white-tailed deer and roe deer) populations. The number of hunted mountain hares and European brown hares decreased when comparing the previous year. In addition, the number of hunted raccoon dogs was about 50 per cent lower than in the year 2010. Altogether 27 waterfowls were hunted in 2011. The population of mountain hare is abundant, despite that there were lynx living on the eastern part of island during the winter 2011. Based on track observations, there are pine martens living on the area as well. In addition, there were some observations of wolves visiting on the area. The winter 2011-2012 was milder than the previous one, and it seemed that young swans wintering on the area survived better that in the previous winter. (orig.)

A functional model for characterizing long-distance movement behaviour

Science.gov (United States)

Buderman, Frances E.; Hooten, Mevin B.; Ivan, Jacob S.; Shenk, Tanya M.

2016-01-01

Advancements in wildlife telemetry techniques have made it possible to collect large data sets of highly accurate animal locations at a fine temporal resolution. These data sets have prompted the development of a number of statistical methodologies for modelling animal movement.Telemetry data sets are often collected for purposes other than fine-scale movement analysis. These data sets may differ substantially from those that are collected with technologies suitable for fine-scale movement modelling and may consist of locations that are irregular in time, are temporally coarse or have large measurement error. These data sets are time-consuming and costly to collect but may still provide valuable information about movement behaviour.We developed a Bayesian movement model that accounts for error from multiple data sources as well as movement behaviour at different temporal scales. The Bayesian framework allows us to calculate derived quantities that describe temporally varying movement behaviour, such as residence time, speed and persistence in direction. The model is flexible, easy to implement and computationally efficient.We apply this model to data from Colorado Canada lynx (Lynx canadensis) and use derived quantities to identify changes in movement behaviour.

Differential immediate and sustained memory enhancing effects of alpha7 nicotinic receptor agonists and allosteric modulators in rats.

Directory of Open Access Journals (Sweden)

Morten S Thomsen

Full Text Available The α7 nicotinic acetylcholine receptor (nAChR is a potential target for the treatment of cognitive deficits in patients with schizophrenia, ADHD and Alzheimer's disease. Here we test the hypothesis that upregulation of α7 nAChR levels underlies the enhanced and sustained procognitive effect of repeated administration of α7 nAChR agonists. We further compare the effect of agonists to that of α7 nAChR positive allosteric modulators (PAMs, which do not induce upregulation of the α7 nAChR. Using the social discrimination test as a measure of short-term memory, we show that the α7 nAChR agonist A-582941 improves short-term memory immediately after repeated (7× daily, but not a single administration. The α7 nAChR PAMs PNU-120596 and AVL-3288 do not affect short-term memory immediately after a single or repeated administration. This demonstrates a fundamental difference in the behavioral effects of agonists and PAMs that may be relevant for clinical development. Importantly, A-582941 and AVL-3288 increase short-term memory 24 hrs after repeated, but not a single, administration, suggesting that repeated administration of both agonists and PAMs may produce sustained effects on cognitive performance. Subsequent [(125I]-bungarotoxin autoradiography revealed no direct correlation between α7 nAChR levels in frontal cortical or hippocampal brain regions and short-term memory with either compound. Additionally, repeated treatment with A-582941 did not affect mRNA expression of RIC-3 or the lynx-like gene products lynx1, lynx2, PSCA, or Ly6H, which are known to affect nAChR function. In conclusion, both α7 nAChR agonists and PAMs exhibit sustained pro-cognitive effects after repeated administration, and altered levels of the α7 nAChR per se, or that of endogenous regulators of nAChR function, are likely not the major cause of this effect.

PAnalyzer: A software tool for protein inference in shotgun proteomics

Directory of Open Access Journals (Sweden)

Prieto Gorka

2012-11-01

Full Text Available Abstract Background Protein inference from peptide identifications in shotgun proteomics must deal with ambiguities that arise due to the presence of peptides shared between different proteins, which is common in higher eukaryotes. Recently data independent acquisition (DIA approaches have emerged as an alternative to the traditional data dependent acquisition (DDA in shotgun proteomics experiments. MSE is the term used to name one of the DIA approaches used in QTOF instruments. MSE data require specialized software to process acquired spectra and to perform peptide and protein identifications. However the software available at the moment does not group the identified proteins in a transparent way by taking into account peptide evidence categories. Furthermore the inspection, comparison and report of the obtained results require tedious manual intervention. Here we report a software tool to address these limitations for MSE data. Results In this paper we present PAnalyzer, a software tool focused on the protein inference process of shotgun proteomics. Our approach considers all the identified proteins and groups them when necessary indicating their confidence using different evidence categories. PAnalyzer can read protein identification files in the XML output format of the ProteinLynx Global Server (PLGS software provided by Waters Corporation for their MSE data, and also in the mzIdentML format recently standardized by HUPO-PSI. Multiple files can also be read simultaneously and are considered as technical replicates. Results are saved to CSV, HTML and mzIdentML (in the case of a single mzIdentML input file files. An MSE analysis of a real sample is presented to compare the results of PAnalyzer and ProteinLynx Global Server. Conclusions We present a software tool to deal with the ambiguities that arise in the protein inference process. Key contributions are support for MSE data analysis by ProteinLynx Global Server and technical replicates

Exploration of the Use of Unmanned Aerial Vehicles along with Other Assets to Enhance Border Protection

Science.gov (United States)

2009-06-01

Border Initiative SUAV Small Unmanned Aerial Vehicle SAR Synthetic Aperture Radar TTPs Tactics, Techniques, And Procedures TRVS Trailer Remote...2008). 4 3. Overview of Illegal Activities According to the CBP, 178,770 pounds of cocaine, 2,178 pounds of heroin, 2,471,931 pounds of marijuana ...Raytheon Company Web Site) Another component of Predator B is the high- resolution Lynx Synthetic Aperture Radar (SAR). In their study, Tsunoda, et

Large Scale Visual Recognition

Science.gov (United States)

2012-06-01

Miniature pinscher Figure 2.5: Visualization of the mammal hierarchy. 23 900 1000 1100 elephant okapi panda platypus Caltech101 Lossless JPG size in...limousine taxi Flat Ours Golden Retriever dog Chihuahua dog Husky domes c animal canine English Se er hyena canine polar bear carnivore...snow leopard feline o er living thing conch en y wheelbarrow carnivore orangutan mammal meerkat mammal carnivore polar bear lynx lion Flat

Development of device drivers embedded in real time OS for SPring-8 SR control system

International Nuclear Information System (INIS)

Masuda, T.; Fujiwara, S.; Nakamura, T.; Takebe, H.; Wada, T.

1994-01-01

A distributed computer system has been adopted for the SPring-8 SR control system. For lower level computers, we intend to adopt VMEbus computer systems with the real time OS which are compliant with POSIX. For R and D study, we introduced LynxOS and wrote device drivers for Digital Output(DO), Digital Input(DI) and Analog Input(AI) boards on VMEbus. They were successfully operated with device drivers. (author)

Environmental Assessment for the Construction of Facilities in Support of the 343d Training Squadron, 37th Training Group, Security Forces Apprentice Course at JBSA-Camp Bullis, Texas

Science.gov (United States)

2012-11-01

territorial seas . Jurisdictional boundaries for waters of the U.S. are defined in the field as the ordinary high water mark, which is that line on...Lynx rufus), gray fox, coyote, and occasionally mountain lion (Felis concolor) (U.S. Army 2007). The northern cardinal (Cardinal cardinalis) and... parasitism . Surveys have been conducted for golden-cheeked warbler on JBSA-Camp Bullis since 1991, and individuals have been detected in every training

Detection of Sarcocystis spp. infection in bobcats (Lynx rufus)

Science.gov (United States)

Verma, S. K.; Calero-Bernal, R.; Lovallo, M. J.; Sweeny, A. R.; Grigg, M. E.; Dubey, J. P.

2015-01-01

The protozoan Sarcocystis neurona is an important cause of severe clinical disease of horses (called equine protozoal myeloencephalitis, EPM), marine mammals, companion animals, and several species of wildlife animals in the Americas. The Virginia opossum (Didelphis virginiana) is its definitive host in the USA and other animals act as intermediate or aberrant hosts. Samples of tongue and heart from 35 bobcats hunted for fur and food from Mississippi State, USA in February, 2014 were used for the present study. Muscles were examined for Sarcocystis infection by microscopic examination of either unfixed muscle squash preparations or pepsin digests, by histopathology of fixed samples, and by molecular methods. Sarcocystis-like bradyzoites were found in digests of 14 hearts and 10 tongues of 35 bobcats. In histological sections, sarcocysts were found in 26 of 35 bobcats; all appeared relatively thin-walled similar to S. felis sarcocysts under light microscope at 1000x magnification. S. neurona-like sarcocysts having thickened villar tips were seen in unstained muscle squash of tongue of two bobcats and PCR-DNA sequencing identified them definitively as S. neurona-like parasite. DNA extracted from bradyzoites obtained from tongue and heart muscle digests was analyzed by PCR-DNA sequencing at the ITS1 locus. Results indicated the presence of S. neurona-like parasite in 26 of 35 samples. ITS1 sequences identical to S. dayspi were identified in 3 bobcats, 2 of which were also co-infected with S. neurona-like parasite. The high prevalence of sarcocysts in bobcat tissues suggested an efficient sylvatic cycle of Sarcocystis spp. in the remote regions of Mississippi State with the bobcat as a relevant intermediate host. PMID:26138150

Proteomic profile of serum of pregnant women carring a fetus with Down syndrome using nano uplc Q-tof ms/ms technology.

Science.gov (United States)

López Uriarte, Graciela Arelí; Burciaga Flores, Carlos Horacio; Torres de la Cruz, Víctor Manuel; Medina Aguado, María Magdalena; Gómez Puente, Viviana Maricela; Romero Gutiérrez, Liliana Nayeli; Martínez de Villarreal, Laura Elia

2018-06-01

Prenatal diagnosis of Down syndrome (DS) is based on the calculated risk of maternal age, biochemical and ultrasonographic markers and recently by cfDNA. Differences in proteomic profiles may give an opportunity to find new biomarkers. Characterize proteome of serum of mothers carrying DS fetus. Blood serum samples of three groups of women were obtained, (a) 10 non-pregnant, (b) 10 pregnant with healthy fetus by ultrasound evaluation, (c) nine pregnant with DS fetus. Sample preparation was as follows: Albumin/IgG depletion, desalting, and trypsin digestion; the process was performed in nanoUPLC MS/MS. Data analysis was made with Mass Lynx 4.1 and ProteinLynx Global Server 3.0, peptide and protein recognition by MASCOT algorithm and UNIPROT-Swissprot database. Each group showed different protein profiles. Some proteins were shared between groups. Only sera from pregnant women showed proteins related to immune and clot pathways. Mothers with DS fetus had 42 specific proteins. We found a different serum protein profile in mothers carrying DS fetuses that do not reflect expression of genes in the extra chromosome. Further studies will be necessary to establish the role of these proteins in aneuploid fetus and analyze their possible use as potential biomarkers.

Statistical core design

International Nuclear Information System (INIS)

Oelkers, E.; Heller, A.S.; Farnsworth, D.A.; Kearfott, K.J.

1978-01-01

The report describes the statistical analysis of DNBR thermal-hydraulic margin of a 3800 MWt, 205-FA core under design overpower conditions. The analysis used LYNX-generated data at predetermined values of the input variables whose uncertainties were to be statistically combined. LYNX data were used to construct an efficient response surface model in the region of interest; the statistical analysis was accomplished through the evaluation of core reliability; utilizing propagation of the uncertainty distributions of the inputs. The response surface model was implemented in both the analytical error propagation and Monte Carlo Techniques. The basic structural units relating to the acceptance criteria are fuel pins. Therefore, the statistical population of pins with minimum DNBR values smaller than specified values is determined. The specified values are designated relative to the most probable and maximum design DNBR values on the power limiting pin used in present design analysis, so that gains over the present design criteria could be assessed for specified probabilistic acceptance criteria. The results are equivalent to gains ranging from 1.2 to 4.8 percent of rated power dependent on the acceptance criterion. The corresponding acceptance criteria range from 95 percent confidence that no pin will be in DNB to 99.9 percent of the pins, which are expected to avoid DNB

Computer gaming comes to service rig training

Energy Technology Data Exchange (ETDEWEB)

Mowers, J.

2007-05-15

This article addressed the challenge of providing service rig workers with a good understanding of the tasks and risks involved in the job before they even step out into the field. The product, SimuLynx was presented. SimuLynx is based on video and gaming technology to immerse the user in the service rig work environment with other crew members. The user tries to perform the different steps of a junior floorhand's job while a coach gives directions. The article discussed how the system works. For example, when faced with a task, the user chooses from several options. The coach informs the virtual junior floorhand if the decision was right or wrong. He will also give warnings and let the user realize the consequences of a wrong action. The benefits of the system were also presented. For example, instead of 30 days of on-the-job training, an employee may only need several days after going through the program. Other benefits that were reviewed included reduced accident risk-levels for new workers; higher rig efficiency; and, lower training costs. In addition, a potential recruit can decide if the job is right for him before signing up for an expensive course or starting off with a service rig company. As well, the rig company can decide if someone is suitable before hiring that person. 3 figs.

The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators control system

OpenAIRE

Van den Eynden, M

1995-01-01

The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete Xenix PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specificatio...

The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators system

OpenAIRE

Charrue, P; Bland, A; Ghinet, F; Ribeiro, P

1995-01-01

The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete XENIX PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specificatio...

First Student Project at the University of Tennessee at Martin Observatory

Science.gov (United States)

Crews, Lionel J.; Turner, K.; Wesner, P.

2011-05-01

The University of Tennessee at Martin has recently completed the construction and setup of an observatory. The dome houses a 16" Meade telescope with SBIG STL-11000M CCD. For its first project, observations of the Delta Scuti type variable SZ Lynx were taken in March and analyzed using MiraPRO. A simple ephemeris calculation was done, and compared to previous results. This project was done under the University Scholars program, a four year scholarship program which includes a faculty-mentored research project.

Evaluating the operations capability of Freedom's Data Management System

Science.gov (United States)

Sowizral, Henry A.

1990-01-01

Three areas of Data Management System (DMS) performance are examined: raw processor speed, the subjective speed of the Lynx OS X-Window system, and the operational capacity of the Runtime Object Database (RODB). It is concluded that the proposed processor will operate at its specified rate of speed and that the X-Window system operates within users' subjective needs. It is also concluded that the RODB cannot provide the required level of service, even with a two-order of magnitude (100 fold) improvement in speed.

Extraordinary Genetic Diversity in a Wood Decay Mushroom.

Science.gov (United States)

Baranova, Maria A; Logacheva, Maria D; Penin, Aleksey A; Seplyarskiy, Vladimir B; Safonova, Yana Y; Naumenko, Sergey A; Klepikova, Anna V; Gerasimov, Evgeny S; Bazykin, Georgii A; James, Timothy Y; Kondrashov, Alexey S

2015-10-01

Populations of different species vary in the amounts of genetic diversity they possess. Nucleotide diversity π, the fraction of nucleotides that are different between two randomly chosen genotypes, has been known to range in eukaryotes between 0.0001 in Lynx lynx and 0.16 in Caenorhabditis brenneri. Here, we report the results of a comparative analysis of 24 haploid genotypes (12 from the United States and 12 from European Russia) of a split-gill fungus Schizophyllum commune. The diversity at synonymous sites is 0.20 in the American population of S. commune and 0.13 in the Russian population. This exceptionally high level of nucleotide diversity also leads to extreme amino acid diversity of protein-coding genes. Using whole-genome resequencing of 2 parental and 17 offspring haploid genotypes, we estimate that the mutation rate in S. commune is high, at 2.0 × 10(-8) (95% CI: 1.1 × 10(-8) to 4.1 × 10(-8)) per nucleotide per generation. Therefore, the high diversity of S. commune is primarily determined by its elevated mutation rate, although high effective population size likely also plays a role. Small genome size, ease of cultivation and completion of the life cycle in the laboratory, free-living haploid life stages and exceptionally high variability of S. commune make it a promising model organism for population, quantitative, and evolutionary genetics. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Design exploration and verification platform, based on high-level modeling and FPGA prototyping, for fast and flexible digital communication in physics experiments

International Nuclear Information System (INIS)

Magazzù, G; Borgese, G; Costantino, N; Fanucci, L; Saponara, S; Incandela, J

2013-01-01

In many research fields as high energy physics (HEP), astrophysics, nuclear medicine or space engineering with harsh operating conditions, the use of fast and flexible digital communication protocols is becoming more and more important. The possibility to have a smart and tested top-down design flow for the design of a new protocol for control/readout of front-end electronics is very useful. To this aim, and to reduce development time, costs and risks, this paper describes an innovative design/verification flow applied as example case study to a new communication protocol called FF-LYNX. After the description of the main FF-LYNX features, the paper presents: the definition of a parametric SystemC-based Integrated Simulation Environment (ISE) for high-level protocol definition and validation; the set up of figure of merits to drive the design space exploration; the use of ISE for early analysis of the achievable performances when adopting the new communication protocol and its interfaces for a new (or upgraded) physics experiment; the design of VHDL IP cores for the TX and RX protocol interfaces; their implementation on a FPGA-based emulator for functional verification and finally the modification of the FPGA-based emulator for testing the ASIC chipset which implements the rad-tolerant protocol interfaces. For every step, significant results will be shown to underline the usefulness of this design and verification approach that can be applied to any new digital protocol development for smart detectors in physics experiments.

Design exploration and verification platform, based on high-level modeling and FPGA prototyping, for fast and flexible digital communication in physics experiments

Science.gov (United States)

Magazzù, G.; Borgese, G.; Costantino, N.; Fanucci, L.; Incandela, J.; Saponara, S.

2013-02-01

In many research fields as high energy physics (HEP), astrophysics, nuclear medicine or space engineering with harsh operating conditions, the use of fast and flexible digital communication protocols is becoming more and more important. The possibility to have a smart and tested top-down design flow for the design of a new protocol for control/readout of front-end electronics is very useful. To this aim, and to reduce development time, costs and risks, this paper describes an innovative design/verification flow applied as example case study to a new communication protocol called FF-LYNX. After the description of the main FF-LYNX features, the paper presents: the definition of a parametric SystemC-based Integrated Simulation Environment (ISE) for high-level protocol definition and validation; the set up of figure of merits to drive the design space exploration; the use of ISE for early analysis of the achievable performances when adopting the new communication protocol and its interfaces for a new (or upgraded) physics experiment; the design of VHDL IP cores for the TX and RX protocol interfaces; their implementation on a FPGA-based emulator for functional verification and finally the modification of the FPGA-based emulator for testing the ASIC chipset which implements the rad-tolerant protocol interfaces. For every step, significant results will be shown to underline the usefulness of this design and verification approach that can be applied to any new digital protocol development for smart detectors in physics experiments.

A framework for quantitative assessment of impacts related to energy and mineral resource development

Science.gov (United States)

Haines, Seth S.; Diffendorfer, James; Balistrieri, Laurie S.; Berger, Byron R.; Cook, Troy A.; Gautier, Donald L.; Gallegos, Tanya J.; Gerritsen, Margot; Graffy, Elisabeth; Hawkins, Sarah; Johnson, Kathleen; Macknick, Jordan; McMahon, Peter; Modde, Tim; Pierce, Brenda; Schuenemeyer, John H.; Semmens, Darius; Simon, Benjamin; Taylor, Jason; Walton-Day, Katherine

2013-01-01

Natural resource planning at all scales demands methods for assessing the impacts of resource development and use, and in particular it requires standardized methods that yield robust and unbiased results. Building from existing probabilistic methods for assessing the volumes of energy and mineral resources, we provide an algorithm for consistent, reproducible, quantitative assessment of resource development impacts. The approach combines probabilistic input data with Monte Carlo statistical methods to determine probabilistic outputs that convey the uncertainties inherent in the data. For example, one can utilize our algorithm to combine data from a natural gas resource assessment with maps of sage grouse leks and piñon-juniper woodlands in the same area to estimate possible future habitat impacts due to possible future gas development. As another example: one could combine geochemical data and maps of lynx habitat with data from a mineral deposit assessment in the same area to determine possible future mining impacts on water resources and lynx habitat. The approach can be applied to a broad range of positive and negative resource development impacts, such as water quantity or quality, economic benefits, or air quality, limited only by the availability of necessary input data and quantified relationships among geologic resources, development alternatives, and impacts. The framework enables quantitative evaluation of the trade-offs inherent in resource management decision-making, including cumulative impacts, to address societal concerns and policy aspects of resource development.

Prostate stem cell antigen interacts with nicotinic acetylcholine receptors and is affected in Alzheimer's disease

DEFF Research Database (Denmark)

Jensen, Majbrit Myrup; Mikkelsen, Jens D.; Arvaniti, Maria

2015-01-01

Alzheimer's disease (AD) is a neurodegenerative disorder involving impaired cholinergic neurotransmission and dysregulation of nicotinic acetylcholine receptors (nAChRs). Ly-6/neurotoxin (Lynx) proteins have been shown to modulate cognition and neural plasticity by binding to nAChR subtypes...... are present in the human brain. We further showed that PSCA forms stable complexes with the α4 nAChR subunit and decreases nicotine-induced extracellular-signal regulated kinase phosphorylation in PC12 cells. In addition, we analyzed protein levels of PSCA and Lypd6 in postmortem tissue of medial frontal...

Primeros registros de 4 especies de felinos en el sur de Puebla, México

OpenAIRE

Farías, Verónica; Téllez, Oswaldo; Botello, Francisco; Hernández, Omar; Berruecos, Jessica; Olivares, Saúl J.; Hernández, Julio C.

2015-01-01

Se presentan los primeros registros de margay (Leopardus wiedii), gato montés (Lynx rufus), puma (Puma concolor) y jaguarundi (Puma yagouaroundi) en el sur del estado de Puebla. El trabajo de campo fue parte de una monitorización participativa que incluyó a las autoridades civiles del ejido. Se colocaron 11 estaciones de cámaras-trampa digitales que funcionaron del 18 de diciembre de 2012 al 18 de febrero de 2014. Con un esfuerzo de muestreo de 2,669 días-trampa y dentro del conjunto de regis...

VMEbus based computer and real-time UNIX as infrastructure of DAQ

International Nuclear Information System (INIS)

Yasu, Y.; Fujii, H.; Nomachi, M.; Kodama, H.; Inoue, E.; Tajima, Y.; Takeuchi, Y.; Shimizu, Y.

1994-01-01

This paper describes what the authors have constructed as the infrastructure of data acquisition system (DAQ). The paper reports recent developments concerned with HP VME board computer with LynxOS (HP742rt/HP-RT) and Alpha/OSF1 with VMEbus adapter. The paper also reports current status of developing a Benchmark Suite for Data Acquisition (DAQBENCH) for measuring not only the performance of VME/CAMAC access but also that of the context switching, the inter-process communications and so on, for various computers including Workstation-based systems and VME board computers

Análise eletromiográfica e força do grupo muscular extensor do punho durante isquemia induzida Electromyographic analysis and strength of the wrist extensor muscle group during induced ischemia

Directory of Open Access Journals (Sweden)

CCA Bandeira

2009-02-01

Full Text Available OBJETIVO: Avaliar o efeito da isquemia induzida sobre os parâmetros do sinal eletromiográfico e a força do grupo muscular extensor do punho (GMEP em mulheres saudáveis. MÉTODOS: Participaram 13 voluntárias, destras, sedentárias, com idade de 23,38±2,32 anos e índice de massa corporal (IMC de 20,68±1,87kg/m². Para determinar a força do GMEP, foram realizadas 3 contrações isométricas voluntárias máximas (CIVM, utilizando-se uma célula de carga por 15 segundos, com intervalos de 2 minutos entre cada contração, sendo todo procedimento repetido por 3 dias não consecutivos. A isquemia foi realizada por 5 minutos, utilizando um esfigmomanômetro posicionado no braço dominante e inflado até a ausência do fluxo sanguíneo, confirmada pelo ultrassom Doppler. Para coleta do sinal eletromiográfico do GMEP, utilizou-se o equipamento EMG1000 (Lynx® com eletrodo de superfície diferencial (Lynx®. Foram coletadas 3 CIVM por 15 segundos, com intervalo de 30 segundos entre elas, nas situações de pré-isquemia; isquemia; pós-isquemia imediata (pós-1 e pós-isquemia tardia (pós-2 - após 10 minutos do início da isquemia. Para análise dos parâmetros do sinal eletromiográfico, root mean square (RMS, e frequência mediana do espectro de potência do sinal foi utilizado o software MATLAB 6.5.1. Para análise estatística, foram utilizados os testes de Friedman e ANOVA two-way. RESULTADOS: A isquemia promoveu redução significativa (pOBJECTIVE: To analyze the effect of induced ischemia on the parameters of electromyographic signals and the strength of the wrist extensor muscle group (WEMG in healthy women. METHODS: Thirteen right-handed sedentary subjects aged 23.38±2.32 years old, with body mass index (BMI of 20.68±1.87kg/m², took part. To determine WEMG strength, three maximal voluntary isometric contractions (MVIC were performed using a load cell for 15 seconds, with 2 minutes intervals between contractions. The entire

Ecotourism Destinations in Romania

Directory of Open Access Journals (Sweden)

Iuliana Ioana Merce

2014-05-01

Full Text Available Romania has about 800 protected areas, which now covers about 5% of the country. Most ecotourism destinations are located within or adjacent to these protected areas such as Danube Delta Biosphere Reserve, northern communities National Park, Yosemite National Park, Apuseni Natural Park. In Romania there are still non-fragmented forest, and over a third of the population of bears, wolves and lynx in Europe, unique paradise of birds in the Danube Delta, more than 12 000 caves and, not least, full of authentic local traditions. Ecotourism allows recovery and conservation of the country's natural capital.

Beginning Ubuntu Linux

CERN Document Server

Raggi, Emilio; Channelle, Andy; Parsons, Trevor; Van Vugt, Sander

2010-01-01

Ubuntu Linux is the fastest growing Linux-based operating system, and Beginning Ubuntu Linux, Fifth Edition teaches all of us - including those who have never used Linux - how to use it productively, whether you come from Windows or the Mac or the world of open source. Beginning Ubuntu Linux, Fifth Edition shows you how to take advantage of the newest Ubuntu release, Lucid Lynx. Based on the best-selling previous edition, Emilio Raggi maintains a fine balance between teaching Ubuntu and introducing new features. Whether you aim to use it in the home or in the office, you'll be introduced to th

[Reference relationships between human and animal in Hildegard von Bingen].

Science.gov (United States)

Riethe, Peter

2012-01-01

In "De animalibus", the 7th book in the "Liber simplicis medicinae", Hildegard von Bingen describes the characteristics of four-footed land animals. Some of these have a special relationship with humans in that they embody moral qualities. An explanation for this is already given in the preface, which states that human intelligence recognizes these qualities, declaring that "You are this or that sort of creature". Since the relationship that animals have with nature shares a degree of similarity with that of man's, they can be regarded as symbolic representatives for particular human traits and characteristics. The article at hand presents Hildegard von Bingen's descriptions of the monkey, the lion, the bear, the rabbit, the dog, the cat, the wolf, the lynx, and the donkey. While the monkey just mimics man's behaviour and is imperfect in both settings, the lion embodies will power. The bear on the other hand stands for unbridled sexual desire, while in the rabbit the gentleness of a sheep is united with the bounce of a deer. The lynx is regarded as hedonistic, the donkey as stupid, and the wolf as surrounded by dangerous sylphs. In Hildegard's depictions, exotic and native animal species display rather extraordinary behavioural traits, and the medieval Christian world view of the author conveys unexpected relationships between humans and animals. In addition to empirical observation and experience, Hildegard also relies on folkloristic beliefs and magical practices related to explanatory models of her time. She allows largely unknown sources into her animal lore but never strays from her ultimate goal of having it serve to instruct people. In doing so, Hildegard removed herself far from the common tradition of medieval animal portraits.

The taxonomy, life cycle and pathology of Sarcoptes scabiei and Notoedres cati (Acarina, Sarcoptidae: A review in a Fennoscandian wildlife perspective

Directory of Open Access Journals (Sweden)

Morten Kraabøl

2015-12-01

Full Text Available Mites constitute an old cosmopolitan group, abundant in various terrestrial and aquatic habitats of considerable environmental variations. The majority of mites are free-living, whereas some have evolved parasitic relationships with a variety of animals either as endo- or ectoparasites. The ectoparasitic and skin burrowing Sarcoptes scabiei and Notoedres cati, cause sarcoptic and notoedric mange among a variety of mammalian species, including humans. In a non-adequate host these mites lead to pseudo-scabies which is often self-curable. The aim of this review is to provide an overview of recent knowledge on the taxonomy, life cycles and pathology of these two mites, which are of relevance to Fennoscandian wildlife, by considering knowledge on transmission vectors, host immunology, and some documented outbreaks. These mites affect the health and survival of mammals in four ways; 1 skin tissue damages, 2 loss of body fluids, 3 allergic reactions and 4 secondary bacterial infections. A short-term effect of outbreaks is usually high mortality, and long-term effects vary from extinction to biased population structure to no effect at all. Red foxes are generalist predators that are important end-hosts for mites that develop disease depending on their immunity status, and transmit mites to other hosts. Outbreaks of mange may possibly have ecological consequences on a wider scale. In an endangered species, like the arctic fox or Eurasian lynx, loss of only a few individuals can be critical. It might be wise for management authorities to develop emergency plans to minimize consequences of outbreaks of sarcoptic or notoedric mange in threatened species such as the arctic fox and the lynx.

Sinks without borders: Snowshoe hare dynamics in a complex landscape

Science.gov (United States)

Griffin, Paul C.; Mills, L. Scott

2009-01-01

A full understanding of population dynamics of wide-ranging animals should account for the effects that movement and habitat use have on individual contributions to population growth or decline. Quantifying the per-capita, habitat-specific contribution to population growth can clarify the value of different patch types, and help to differentiate population sources from population sinks. Snowshoe hares, Lepus americanus, routinely use various habitat types in the landscapes they inhabit in the contiguous US, where managing forests for high snowshoe hare density is a priority for conservation of Canada lynx, Lynx canadensis. We estimated density and demographic rates via mark–recapture live trapping and radio-telemetry within four forest stand structure (FSS) types at three study areas within heterogeneous managed forests in western Montana. We found support for known fate survival models with time-varying individual covariates representing the proportion of locations in each of the FSS types, with survival rates decreasing as use of open young and open mature FSS types increased. The per-capita contribution to overall population growth increased with use of the dense mature or dense young FSS types and decreased with use of the open young or open mature FSS types, and relatively high levels of immigration appear to be necessary to sustain hares in the open FSS types. Our results support a conceptual model for snowshoe hares in the southern range in which sink habitats (open areas) prevent the buildup of high hare densities. More broadly, we use this system to develop a novel approach to quantify demographic sources and sinks for animals making routine movements through complex fragmented landscapes.

The FINUDA data acquisition system

International Nuclear Information System (INIS)

Cerello, P.; Marcello, S.; Filippini, V.; Fiore, L.; Gianotti, P.; Raimondo, A.

1996-07-01

A parallel scalable Data Acquisition System, based on VME, has been developed to be used in the FINUDA experiment, scheduled to run at the DAPHNE machine at Frascati starting from 1997. The acquisition software runs on embedded RTPC 8067 processors using the LynxOS operating system. The readout of event fragments is coordinated by a suitable trigger Supervisor. data read by different controllers are transported via dedicated bus to a Global Event Builder running on a UNIX machine. Commands from and to VME processors are sent via socket based network protocols. The network hardware is presently ethernet, but it can easily changed to optical fiber

Calf mortality of semi-domesticated reindeer (Rangifer tarandus tarandus in the Finnish reindeer-herding area

Directory of Open Access Journals (Sweden)

Mauri Nieminen

2013-06-01

comprised 53% and wolf-killed 45%. Predation was 70% of total mortality in the Halla cooperative, and predation by wolf, bear, lynx and wolverine comprised on average 38%, 20%, 9% and 2.3%, respectively. The sex and pelt color did not significantly affect survival of calves. Birth weight of calves killed by bears was significantly (P<0.01 lighter than those not killed, but those calves killed by lynxes were significantly (P<0.05 heavier than that survived. Bears killed calves mainly in May-July, wolves in July-October and lynx in August-December.

Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

Energy Technology Data Exchange (ETDEWEB)

Truve, Johan; Cederlund, Goeran [Svensk Naturfoervaltning AB, Ramsberg (Sweden)

2005-06-01

The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented.

Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

Energy Technology Data Exchange (ETDEWEB)

Truve, Johan; Cederlund, Goeran [Svensk Naturfoervaltning AB, Ramsberg (Sweden)

2005-06-01

The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented.

Artificial intelligence: Neural network model as the multidisciplinary team member in clinical decision support to avoid medical mistakes.

Science.gov (United States)

Buzaev, Igor Vyacheslavovich; Plechev, Vladimir Vyacheslavovich; Nikolaeva, Irina Evgenievna; Galimova, Rezida Maratovna

2016-09-01

The continuous uninterrupted feedback system is the essential part of any well-organized system. We propose aLYNX concept that is a possibility to use an artificial intelligence algorithm or a neural network model in decision-making system so as to avoid possible mistakes and to remind the doctors to review tactics once more in selected cases. aLYNX system includes: registry with significant factors, decisions and results; machine learning process based on this registry data; the use of the machine learning results as the adviser. We show a possibility to build a computer adviser with a neural network model for making a choice between coronary aortic bypass surgery (CABG) and percutaneous coronary intervention (PCI) in order to achieve a higher 5-year survival rate in patients with angina based on the experience of 5107 patients. The neural network was trained by 4679 patients who achieved 5-year survival. Among them, 2390 patients underwent PCI and 2289 CABG. After training, the correlation coefficient ( r ) of the network was 0.74 for training, 0.67 for validation, 0.71 for test and 0.73 for total. Simulation of the neural network function has been performed after training in the two groups of patients with known 5-year outcome. The disagreement rate was significantly higher in the dead patient group than that in the survivor group between neural network model and heart team [16.8% (787/4679) vs. 20.3% (87/428), P  = 0.065)]. The study shows the possibility to build a computer adviser with a neural network model for making a choice between CABG and PCI in order to achieve a higher 5-year survival rate in patients with angina.

New World feline APOBEC3 potently controls inter-genus lentiviral transmission.

Science.gov (United States)

Konno, Yoriyuki; Nagaoka, Shumpei; Kimura, Izumi; Yamamoto, Keisuke; Kagawa, Yumiko; Kumata, Ryuichi; Aso, Hirofumi; Ueda, Mahoko Takahashi; Nakagawa, So; Kobayashi, Tomoko; Koyanagi, Yoshio; Sato, Kei

2018-04-10

The apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3 (APOBEC3; A3) gene family appears only in mammalian genomes. Some A3 proteins can be incorporated into progeny virions and inhibit lentiviral replication. In turn, the lentiviral viral infectivity factor (Vif) counteracts the A3-mediated antiviral effect by degrading A3 proteins. Recent investigations have suggested that lentiviral vif genes evolved to combat mammalian APOBEC3 proteins, and have further proposed that the Vif-A3 interaction may help determine the co-evolutionary history of cross-species lentiviral transmission in mammals. Here we address the co-evolutionary relationship between two New World felids, the puma (Puma concolor) and the bobcat (Lynx rufus), and their lentiviruses, which are designated puma lentiviruses (PLVs). We demonstrate that PLV-A Vif counteracts the antiviral action of APOBEC3Z3 (A3Z3) of both puma and bobcat, whereas PLV-B Vif counteracts only puma A3Z3. The species specificity of PLV-B Vif is irrespective of the phylogenic relationships of feline species in the genera Puma, Lynx and Acinonyx. We reveal that the amino acid at position 178 in the puma and bobcat A3Z3 is exposed on the protein surface and determines the sensitivity to PLV-B Vif-mediated degradation. Moreover, although both the puma and bobcat A3Z3 genes are polymorphic, their sensitivity/resistance to PLV Vif-mediated degradation is conserved. To the best of our knowledge, this is the first study suggesting that the host A3 protein potently controls inter-genus lentiviral transmission. Our findings provide the first evidence suggesting that the co-evolutionary arms race between lentiviruses and mammals has occurred in the New World.

Artificial intelligence: Neural network model as the multidisciplinary team member in clinical decision support to avoid medical mistakes

Directory of Open Access Journals (Sweden)

Igor Vyacheslavovich Buzaev

2016-09-01

Full Text Available Objective: The continuous uninterrupted feedback system is the essential part of any well-organized system. We propose aLYNX concept that is a possibility to use an artificial intelligence algorithm or a neural network model in decision-making system so as to avoid possible mistakes and to remind the doctors to review tactics once more in selected cases. Method: aLYNX system includes: registry with significant factors, decisions and results; machine learning process based on this registry data; the use of the machine learning results as the adviser. We show a possibility to build a computer adviser with a neural network model for making a choice between coronary aortic bypass surgery (CABG and percutaneous coronary intervention (PCI in order to achieve a higher 5-year survival rate in patients with angina based on the experience of 5107 patients. Results: The neural network was trained by 4679 patients who achieved 5-year survival. Among them, 2390 patients underwent PCI and 2289 CABG. After training, the correlation coefficient (r of the network was 0.74 for training, 0.67 for validation, 0.71 for test and 0.73 for total. Simulation of the neural network function has been performed after training in the two groups of patients with known 5-year outcome. The disagreement rate was significantly higher in the dead patient group than that in the survivor group between neural network model and heart team [16.8% (787/4679 vs. 20.3% (87/428, P = 0.065]. Conclusion: The study shows the possibility to build a computer adviser with a neural network model for making a choice between CABG and PCI in order to achieve a higher 5-year survival rate in patients with angina. Keywords: Coronary artery bypass grafting, Percutaneous coronary intervention, Artificial intelligence, Decision making

Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

International Nuclear Information System (INIS)

Truve, Johan; Cederlund, Goeran

2005-06-01

The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented

Inventory of mammals at Forsmark and Haallnaes; Inventering av daeggdjur i Forsmark och Haallnaes

Energy Technology Data Exchange (ETDEWEB)

Truve, Johan [Svensk Naturfoervaltning AB, Goeteborg (Sweden)

2012-08-15

A selection of terrestrial mammals was surveyed in the SKB site investigation areas near Forsmark and Haallnaes between January and April 2012. The methods that were used include snow tracking along line transects, snow tracking along water, aerial survey and fecal pellet counts. The same species were found in 2012 as in previous surveys performed in 2002, 2003 and 2007. Some species show a large variation in density between years and it is difficult to draw any conclusions about their long term development. Several carnivores, i.e. lynx, fox and otter show a positive growth rate in both areas. The wild boar population is also growing whilst moose density remains fairly stable and roe deer are becoming less numerous.

Inventory of mammals at Forsmark and Haallnaes

International Nuclear Information System (INIS)

Truve, Johan

2012-08-01

A selection of terrestrial mammals was surveyed in the SKB site investigation areas near Forsmark and Haallnaes between January and April 2012. The methods that were used include snow tracking along line transects, snow tracking along water, aerial survey and fecal pellet counts. The same species were found in 2012 as in previous surveys performed in 2002, 2003 and 2007. Some species show a large variation in density between years and it is difficult to draw any conclusions about their long term development. Several carnivores, i.e. lynx, fox and otter show a positive growth rate in both areas. The wild boar population is also growing whilst moose density remains fairly stable and roe deer are becoming less numerous

Renewing library Web sites CMS at libraries

CERN Document Server

Vida, A

2006-01-01

The use of the Internet has a ten-year history in Hungary. In the beginning, users were surfing on textual Web sites with the browser Lynx (1991), then a range of graphic browsers appeared: Mosaic (1993) , Netscape (1994), and finally Internet Explorer (1995). More and more institutions, including libraries decided to enter the World Wide Web with their own homepage. The past ten years have brought enormous changes and new requirements in the way that institutional homepages are designed. This article offers an overview of the development phases of Web sites, presents the new tools necessary for the state-of-the-art design and gives advice on their up-to-date maintenance.

The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators control system

CERN Document Server

Van den Eynden, M

1995-01-01

The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete Xenix PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specification for the new PowerPC technology, the re-engineering aspects, the interfaces with other CERN wide projects, and the set up of a development environment. This project offers also support for other major SPS and LEP projects interested in the PowerPC microprocessor technology.

The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators system

CERN Document Server

Charrue, P; Ghinet, F; Ribeiro, P

1995-01-01

The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete XENIX PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specification for the new PowerPC technology, the re-engineering aspects, the interfaces with other CERN wide projects, and the set up of a development environment. This project offers also support for other major SPS and LEP projects interested in the PowerPC microprocessor technology.

Metabolite characterization of a novel sedative drug, remimazolam in human plasma and urine using ultra high-performance liquid chromatography coupled with synapt high-definition mass spectrometry.

Science.gov (United States)

Zhou, Ying; Hu, Pei; Jiang, Ji

2017-04-15

Remimazolam is a new chemical entity belonging to the benzodiazepine class of sedative drugs, which shows faster-acting onset and recovery than currently available short-acting sedatives. In the present study, ultra high performance liquid chromatography with synapt high-definition mass spectrometry method combined with MassLynx software was established to characterize metabolites of remimazolam in human plasma and urine. In total, 5 human metabolites were detected, including 3 phase I and 2 phase II metabolites. There was no novel human metabolite detected compared to that in rat. Hydrolysis, glucuronidation and oxidation were the major metabolic reactions. To our knowledge, this is the first report of the human metabolic profile of remimazolam. Copyright © 2017 Elsevier B.V. All rights reserved.

Multi-species genetic connectivity in a terrestrial habitat network.

Science.gov (United States)

Marrotte, Robby R; Bowman, Jeff; Brown, Michael G C; Cordes, Chad; Morris, Kimberley Y; Prentice, Melanie B; Wilson, Paul J

2017-01-01

Habitat fragmentation reduces genetic connectivity for multiple species, yet conservation efforts tend to rely heavily on single-species connectivity estimates to inform land-use planning. Such conservation activities may benefit from multi-species connectivity estimates, which provide a simple and practical means to mitigate the effects of habitat fragmentation for a larger number of species. To test the validity of a multi-species connectivity model, we used neutral microsatellite genetic datasets of Canada lynx ( Lynx canadensis ), American marten ( Martes americana ), fisher ( Pekania pennanti ), and southern flying squirrel ( Glaucomys volans ) to evaluate multi-species genetic connectivity across Ontario, Canada. We used linear models to compare node-based estimates of genetic connectivity for each species to point-based estimates of landscape connectivity (current density) derived from circuit theory. To our knowledge, we are the first to evaluate current density as a measure of genetic connectivity. Our results depended on landscape context: habitat amount was more important than current density in explaining multi-species genetic connectivity in the northern part of our study area, where habitat was abundant and fragmentation was low. In the south however, where fragmentation was prevalent, genetic connectivity was correlated with current density. Contrary to our expectations however, locations with a high probability of movement as reflected by high current density were negatively associated with gene flow. Subsequent analyses of circuit theory outputs showed that high current density was also associated with high effective resistance, underscoring that the presence of pinch points is not necessarily indicative of gene flow. Overall, our study appears to provide support for the hypothesis that landscape pattern is important when habitat amount is low. We also conclude that while current density is proportional to the probability of movement per unit area

Ups and downs of space tourism development in 60 years from moon register to spaceshiptwo CRASH

Science.gov (United States)

Chang, Yi-Wei; Chern, Jeng-Shing

2016-10-01

In human imagination, dreams and expectations, the sequence of ;space tourism; has most likely been Moon tourism, Earth orbital tourism and then suborbital tourism. But the sequence in actual development is the reverse: first Earth suborbital tourism, then orbital tourism, and finally Moon tourism. In 1954, three years before the successful launch of the first human artificial satellite, the world's oldest travel company, Thomas Cook in Britain, initiated the ;Moon Register.; Enthusiasts could sign an option for a commercial trip to the Moon and the company guaranteed to provide tickets at the earliest possible date. Sixty years later on 31st October 2014, the first SpaceShip Two (SS2) of Virgin Galactic developed for commercial suborbital space tourism (SST) and scientific research crashed at the Mojave Desert in California during test flight. Although the first privately paid space tourist had traveled to the International Space Station in 2001, this was only for millionaires and not the general public. In 2004, although SpaceShipOne won the Ansari X prize and shed the first light on SST, the commercial SST operations originally planned to be realized in 2008 are now long overdue. The SS2 has been just one of the reusable suborbital launch vehicles developed for SST and other purposes, with others including the Lynx, Spaceplane and Dream Chaser. However a tragedy in which the SS2 crashed and caused the sacrifice of one senior test pilot alerted tourists that the long overdue of SST might still be a few years away. The purposes of this paper are to review and discuss the ups and downs of space tourism development in the 60 years from 1954 to 2014, and to look forward to get more clear future from the unveiling of second SS2 on 19th February 2016 and the continuous development of Lynx Mark I. However in any case, there are still many constraints including economy.

Automated mass correction and data interpretation for protein open-access liquid chromatography-mass spectrometry.

Science.gov (United States)

Wagner, Craig D; Hall, John T; White, Wendy L; Miller, Luke A D; Williams, Jon D

2007-02-01

Characterization of recombinant protein purification fractions and final products by liquid chromatography-mass spectrometry (LC/MS) are requested more frequently each year. A protein open-access (OA) LC/MS system was developed in our laboratory to meet this demand. This paper compares the system that we originally implemented in our facilities in 2003 to the one now in use, and discusses, in more detail, recent enhancements that have improved its robustness, reliability, and data reporting capabilities. The system utilizes instruments equipped with reversed-phase chromatography and an orthogonal accelerated time-of-flight mass spectrometer fitted with an electrospray source. Sample analysis requests are accomplished using a simple form on a web-enabled laboratory information management system (LIMS). This distributed form is accessible from any intranet-connected company desktop computer. Automated data acquisition and processing are performed using a combination of in-house (OA-Self Service, OA-Monitor, and OA-Analysis Engine) and vendor-supplied programs (AutoLynx, and OpenLynx) located on acquisition computers and off-line processing workstations. Analysis results are then reported via the same web-based LIMS. Also presented are solutions to problems not addressed on commercially available, small-molecule OA-LC/MS systems. These include automated transforming of mass-to-charge (m/z) spectra to mass spectra and automated data interpretation that considers minor variants to the protein sequence-such as common post-translational modifications (PTMs). Currently, our protein OA-LC/MS platform runs on five LC/MS instruments located in three separate GlaxoSmithKline R&D sites in the US and UK. To date, more than 8000 protein OA-LC/MS samples have been analyzed. With these user friendly and highly automated OA systems in place, mass spectrometry plays a key role in assessing the quality of recombinant proteins, either produced at our facilities or bought from external

SU-F-T-152: Experimental Validation and Calculation Benchmark for a Commercial Monte Carlo Pencil BeamScanning Proton Therapy Treatment Planning System in Heterogeneous Media

Energy Technology Data Exchange (ETDEWEB)

Lin, L; Huang, S; Kang, M; Ainsley, C; Simone, C; McDonough, J; Solberg, T [University of Pennsylvania, Philadelphia, PA (United States)

2016-06-15

Purpose: Eclipse AcurosPT 13.7, the first commercial Monte Carlo pencil beam scanning (PBS) proton therapy treatment planning system (TPS), was experimentally validated for an IBA dedicated PBS nozzle in the CIRS 002LFC thoracic phantom. Methods: A two-stage procedure involving the use of TOPAS 1.3 simulations was performed. First, Geant4-based TOPAS simulations in this phantom were experimentally validated for single and multi-spot profiles at several depths for 100, 115, 150, 180, 210 and 225 MeV proton beams, using the combination of a Lynx scintillation detector and a MatriXXPT ionization chamber array. Second, benchmark calculations were performed with both AcurosPT and TOPAS in a phantom identical to the CIRS 002LFC, with the exception that the CIRS bone/mediastinum/lung tissues were replaced with similar tissues that are predefined in AcurosPT (a limitation of this system which necessitates the two stage procedure). Results: Spot sigmas measured in tissue were in agreement within 0.2 mm of TOPAS simulation for all six energies, while AcurosPT was consistently found to have larger spot sigma (<0.7 mm) than TOPAS. Using absolute dose calibration by MatriXXPT, the agreements between profiles measurements and TOPAS simulation, and calculation benchmarks are over 97% except near the end of range using 2 mm/2% gamma criteria. Overdosing and underdosing were observed at the low and high density side of tissue interfaces, respectively, and these increased with increasing depth and decreasing energy. Near the mediastinum/lung interface, the magnitude can exceed 5 mm/10%. Furthermore, we observed >5% quenching effect in the conversion of Lynx measurements to dose. Conclusion: We recommend the use of an ionization chamber array in combination with the scintillation detector to measure absolute dose and relative PBS spot characteristics. We also recommend the use of an independent Monte Carlo calculation benchmark for the commissioning of a commercial TPS. Partially

Mechanosynthesis, crystal structure and magnetic characterization of neodymium orthoferrite

Energy Technology Data Exchange (ETDEWEB)

Serna, Pedro Vera; Campos, Cecilio Garcia [Division de Ingenierias, Universidad Politecnica de Tecamac (UPTECAMAC), Tecamac de Felipe Villanueva, Estado de Mexico (Mexico); De Jesus, Felix Sanchez; Miro, Ana Maria Bolarin [Area Academica de Ciencias de la Tierra y Materiales, Universidad Autonoma del Estado de Hidalgo (UAEH), Mineral de la Reforma, Hidalgo (Mexico); Loran, Jose Antonio Juanico [Division de Ingenieria Industrial Nanotecnologia, Universidad Politecnica del Valle de Mexico (UPVM), Tultitlan, Estado de Mexico (Mexico); Longwell, Jeffrey, E-mail: pedrovera.upt@gmail.com [Department of Languages and Linguistics, New Mexico State University (NMSU), Las Cruces, NM (United States)

2016-03-15

Neodymium orthoferrite NdFeO{sub 3} was obtained at room temperature by mechanosynthesis with a stoichiometric ratio of Nd2O{sub 3} and Fe{sub 2}O{sub 3} powders, whereas the traditional synthesis requires a temperature of approximately 1000 °C. The crystal structure was analyzed by X-ray diffraction analysis using Cu radiation and a LynxEye XE detector, whose strong fluorescence filtering enabled a high signal intensity. The analysis indicated that the obtained crystallites were nano-sized. The particle morphology was observed by scanning electron microscopy, and the magnetic saturation was tested by vibrating sample magnetometry. The synthesis of NdFeO{sub 3} was detected after a few hours of milling, indicating that the milling imparted mechanical energy to the system. (author)

Design and Optimization of Multi-Pixel Transition-Edge Sensors for X-Ray Astronomy Applications

Science.gov (United States)

Smith, Stephen J.; Adams, Joseph S.; Bandler, Simon R.; Chervenak, James A.; Datesman, Aaron Michael; Eckart, Megan E.; Ewin, Audrey J.; Finkbeiner, Fred M.; Kelley, Richard L.; Kilbourne, Caroline A.;

The importance of pesticide exposure duration and mode on the foraging of an agricultural pest predator.

Science.gov (United States)

Brown, Caitlyn; Hanna, Chadwick J; Hanna, Catherine J B

2015-02-01

The striped lynx spider (Oxyopes salticus), is a natural predator of crop pests and therefore frequently encounters pesticides on its substrate and its prey. While pesticide exposure may negatively impact the lifespan of spiders, sublethal effects can also alter their normal behaviors. This study examined how prey capture was affected when spiders and their prey were exposed to bifenthrin and malathion. When spiders were continually exposed to bifenthrin residues, prey capture decreased over time, but mortality was not affected. Malathion exposed spiders, however, showed increased mortality, but their ability to catch prey was unaltered. When spiders encountered pesticide dosed prey, predation was unaffected, implying that spiders are unable to detect residues on prey. These results improve the understanding of how pesticides affect natural pest control and raise questions about the functional roles that spiders play when exposed to different chemicals.

Performance and scalability of the back-end sub-system in the ATLAS DAQ/EF prototype

CERN Document Server

Alexandrov, I N; Badescu, E; Burckhart, Doris; Caprini, M; Cohen, L; Duval, P Y; Hart, R; Jones, R; Kazarov, A; Kolos, S; Kotov, V; Laugier, D; Mapelli, Livio P; Moneta, L; Qian, Z; Radu, A A; Ribeiro, C A; Roumiantsev, V; Ryabov, Yu; Schweiger, D; Soloviev, I V

2000-01-01

The DAQ group of the future ATLAS experiment has developed a prototype system based on the trigger/DAQ architecture described in the ATLAS Technical Proposal to support studies of the full system functionality, architecture as well as available hardware and software technologies. One sub-system of this prototype is the back- end which encompasses the software needed to configure, control and monitor the DAQ, but excludes the processing and transportation of physics data. The back-end consists of a number of components including run control, configuration databases and message reporting system. The software has been developed using standard, external software technologies such as OO databases and CORBA. It has been ported to several C++ compilers and operating systems including Solaris, Linux, WNT and LynxOS. This paper gives an overview of the back-end software, its performance, scalability and current status. (17 refs).

Early-type galaxies: mass-size relation at z ˜ 1.3 for different environments

Science.gov (United States)

Raichoor, A.; Mei, S.; Stanford, S. A.; Holden, B. P.; Nakata, F.; Rosati, P.; Shankar, F.; Tanaka, M.; Ford, H.; Huertas-Company, M.; Illingworth, G.; Kodama, T.; Postman, M.; Rettura, A.; Blakeslee, J. P.; Demarco, R.; Jee, M. J.; White, R. L.

2011-12-01

We combine multi-wavelength data of the Lynx superstructure and GOODS/CDF-S to build a sample of 75 visually selected early-type galaxies (ETGs), spanning different environments (cluster/group/field) at z ˜ 1.3. By estimating their mass, age (SED fitting, with a careful attention to the stellar population model used) and size, we are able to probe the dependence on the environment of the mass-size relation. We find that, for ETGs with 10^{10} < M / M_⊙ < 10^{11.5}, (1) the mass-size relation in the field did not evolve overall from z ˜ 1.3 to present; (2) the mass-size relation in cluster/group environments at z ˜ 1.3 lies at smaller sizes than the local mass-size relation (R_{e,z ˜ 1.3}/R_{e,z = 0} ˜ 0.6-0.8).

Experimental and numerical study of the British Experimental Rotor Programme blade

Science.gov (United States)

Brocklehurst, Alan; Duque, Earl P. N.

1990-01-01

Wind-tunnel tests on the British Experimental Rotor Programme (BERP) tip are described, and the results are compared with computational fluid dynamics (CFD) results. The test model was molded using the Lynx-BERP blade tooling to provide a semispan, cantilever wing comprising the outboard 30 percent of the rotor blade. The tests included both surface-pressure measurements and flow visualization to obtain detailed information of the flow over the BERP tip for a range of angles of attack. It was observed that, outboard of the notch, favorable pressure gradients exist which ensure attached flow, and that the tip vortex also remains stable to large angles of attack. On the rotor, these features yield a very gradual break in control loads when the retreating-blade limit is eventually reached. Computational and experimental results were generally found to be in good agreement.

Sylvatic trichinellosis in Texas

Directory of Open Access Journals (Sweden)

Pence D.B.

2001-06-01

Full Text Available There are no published reports of domestic or sylvatic trichinellosis in Texas. The aim of the present survey was to determine the presence of Trichinella species in selected representative species of potential wildlife reservoirs in southern Texas. In 1998-99, tongues of 211 wild mammals were collected in southern Texas: 154 coyotes (Canis latrans, three bobcats (Lynx rufus, 32 racoons (Procyon lotor, 1 3 opossum (Didelphis marsupialis, four ocelots (Leopardus pardalis and five wild boars (Sus scrofa. Presence of Trichinella sp. larvae was investigated by artificial digestion and larvae of positive samples were identified at the species level by a multiple-polymerase chain reaction analysis. Nine (5.8 % coyotes had trichinellosis ; in the muscles of seven of these coyotes, the larvae were identified as Trichinella murrelli. This is the first report of sylvatic trichinellosis in Texas.

New developments on Tore Supra data acquisition units

International Nuclear Information System (INIS)

Leroux, F.; Caulier, G.; Ducobu, L.; Goniche, M.; Antar, G.

2012-01-01

The Tore Supra data acquisition system (DAS) was designed in the early eighties and has considerably evolved since then. Three generations of data acquisition units still coexist. As cost and maintenance of different operating systems is expensive, it was decided to explore an alternative solution based on an open source operating system (OS) with a disk-less system for the fourth generation. In 2010, Linux distributions for VME bus and PCI bus systems have been evaluated and compared to Lynx OS TM real time OS. The results obtained allowed to choose a version of Linux for VME and PC platform for DAS on Tore Supra. In 2011, the Tore Supra DAS dedicated software was ported on a Linux disk-less PCI platform. The new generation was successfully tested during real plasma experiments on one diagnostic, called DCEDRE. (authors)

Aksu-Zhabagly Nature Reserve's 90-anniversary

Directory of Open Access Journals (Sweden)

Anatoliy F. Kovshar

2016-05-01

Full Text Available The Aksu-Zhabagly nature reserve is located in West Tien Shan in Kazakhstan, on the border of three countries – Kazakhstan, Kyrgyzstan and Uzbekistan (70°18'-57' E and 42°08'-30' N, with an area of 1281 km2; its length is 53 km from the most western to the most eastern point and 41 km from the most southern to the most northern point. It occupies the western limit of the Talasskiy Alatau ridge and its north-western spurs: Zhabaglytau mountains, Alatau, Bugultor, Aksutau and Ugam ridges. In the neighbouring Karatau ridge there is a palaeontological site with an area of 2.2 km2 with deposits of flora and fauna of the Jurassic period. The absolute heights above sea level are 1300–4200 m. The relief is alpine – deep canyons with steep slopes. The middle mountain zone (1300–2000 m is occupied by meadow-steppe formations with juniper sparse forests (Juniperus semiglobosa, J. seravschanica; subalpine meadows (2000–3000 m are alternated by creeping juniper thickets (Juniperus turkestanica and rocky outcrops; the alpine zone (higher than 3000 m is dominated by rocks and snowfields, and glaciers above 3500 m. The nature reserve's flora constitutes almost half of all West Tien Shan's flora and counts 1737 species, including: 235 species of fungi, 64 lichens, 63 species each of algae and mosses, as well as 1312 species of higher plants. Among those, 200 species are medicinal and 57 species are listed in the Red Data Books of Kazakhstan, Uzbekistan and Kyrgyzstan. The vertebrates fauna includes 320 species: mammals – 52 species, birds – 247 (130 of them are nesting, reptiles and amphibians – 14, fishes – 7 species. Animals inhabiting the territory include argali (Ovis ammon karelini, mountain goat (Capra sibirica, bear (Ursus arctos isabellinus, snow leopart (Uncia uncia, Turkestan lynx (Lynx lynx isabellinus; birds – bearded vulture (Gypaёtus barbatus, Himalayan snowcock (Tetraogallus himalayensis, chukar (Alectoris chukar, blue

Surveys of mammal populations in the areas adjacent to Forsmark and Tierp. A pilot study 2001-2002

Energy Technology Data Exchange (ETDEWEB)

Cederlund, Goeran; Hammarstroem, Angelica; Wallin, Kjell [Svensk Viltfoervaltning AB, Ramsberg (Sweden)

2003-04-01

The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. To get relevant data on the dynamics of the mammal populations it is important to estimate the abundance and variations over time. Data achieved can be used to specifically monitor endangered species (like wolf, Canis lupus, and otter, Lutra lutra), detect effects from e.g. drilling activities on populations (important to hunters) and be used for assessment programs (MKB). One of the major goals is to monitor populations over several years and to obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclide. From late 2001 to late spring 2002 a pilot study was accomplished in the areas surrounding the suggested areas in the Tierp region and in Forsmark (Oskarshamn was not included in this pilot study). A reference area was chosen near the coast some 20 km north of Forsmark. The aim was to initiate surveys of most of the larger mammal species that were expected to be found in the region. Selected species were wolf, lynx, otter, marten, mink, red fox, beaver, wild boar, red deer, roe deer, moose, European hare and mountain hare. Several methods were used and adapted to expected habitat use and expected local density of the species. Line transects were used on snow to index (frequency of tracks crossing the transects) or calculate actual number (for example the Buffon method). Pellet counts were used in spring to calculate hare and cervid (moose and deer species) density. In mid winter an aerial (helicopter) survey was conducted along the coast to count moose. The aquatic mammals were tracked on snow along selected parts of the streams and

Surveys of mammal populations in the areas adjacent to Forsmark and Tierp. A pilot study 2001-2002

International Nuclear Information System (INIS)

Cederlund, Goeran; Hammarstroem, Angelica; Wallin, Kjell

2003-04-01

The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. To get relevant data on the dynamics of the mammal populations it is important to estimate the abundance and variations over time. Data achieved can be used to specifically monitor endangered species (like wolf, Canis lupus, and otter, Lutra lutra), detect effects from e.g. drilling activities on populations (important to hunters) and be used for assessment programs (MKB). One of the major goals is to monitor populations over several years and to obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclide. From late 2001 to late spring 2002 a pilot study was accomplished in the areas surrounding the suggested areas in the Tierp region and in Forsmark (Oskarshamn was not included in this pilot study). A reference area was chosen near the coast some 20 km north of Forsmark. The aim was to initiate surveys of most of the larger mammal species that were expected to be found in the region. Selected species were wolf, lynx, otter, marten, mink, red fox, beaver, wild boar, red deer, roe deer, moose, European hare and mountain hare. Several methods were used and adapted to expected habitat use and expected local density of the species. Line transects were used on snow to index (frequency of tracks crossing the transects) or calculate actual number (for example the Buffon method). Pellet counts were used in spring to calculate hare and cervid (moose and deer species) density. In mid winter an aerial (helicopter) survey was conducted along the coast to count moose. The aquatic mammals were tracked on snow along selected parts of the streams and

Seasonal Effects of Habitat on Sources and Rates of Snowshoe Hare Predation in Alaskan Boreal Forests.

Directory of Open Access Journals (Sweden)

Dashiell Feierabend

Full Text Available Survival and predation of snowshoe hares (Lepus americanus has been widely studied, yet there has been little quantification of the changes in vulnerability of hares to specific predators that may result from seasonal changes in vegetation and cover. We investigated survival and causes of mortalities of snowshoe hares during the late increase, peak, and decline of a population in interior Alaska. From June 2008 to May 2012, we radio-tagged 288 adult and older juvenile hares in early successional and black spruce (Picea mariana forests and, using known-fate methods in program MARK, evaluated 85 survival models that included variables for sex, age, and body condition of hares, as well as trapping site, month, season, year, snowfall, snow depth, and air temperature. We compared the models using Akaike's information criterion with correction for small sample size. Model results indicated that month, capture site, and body condition were the most important variables in explaining survival rates. Survival was highest in July, and more generally during summer, when alternative prey was available to predators of hares. Low survival rates coincided with molting periods, breeding activity in the spring, and the introduction of juveniles to the sample population in the fall. We identified predation as the cause of mortality in 86% of hare deaths. When the source of predation could be determined, hares were killed more often by goshawks (Accipiter gentilis than other predators in early successional forest (30%, and more often by lynx (Lynx canadensis than other predators in black spruce forest (31%. Great horned owls (Bubo virginianus and coyotes (Canis latrans represented smaller proportions of hare predation, and non-predatory causes were a minor source (3% of mortality. Because hares rely on vegetative cover for concealment from predators, we measured cover in predation sites and habitats that the hares occupied and concluded that habitat type had a

New Metabolites of Coumarin Detected in Human Urine Using Ultra Performance Liquid Chromatography/Quadrupole-Time-of-Flight Tandem Mass Spectrometry

Directory of Open Access Journals (Sweden)

Letícia Paula Leonart

2017-11-01

Full Text Available Coumarin (1,2-benzopyrone is a natural compound whose metabolism in humans was established in the 1970s. However, a new metabolite was recently identified in human plasma, indicating that the metabolism of coumarin has not been completely elucidated. To complement the knowledge of its metabolism, a rapid and sensitive method using UPLC-QTOF-MS was developed. A total of 12 metabolites was identified using MetaboLynxTM software, including eight metabolites not previously reported in human urine. The identified biotransformation included hydroxylation, glucuronidation, sulfation, methylation, and conjugation with N-acetylcysteine. The present work demonstrates that the metabolism study of coumarin was incomplete, possibly due to limitations of old techniques. The identification of eight inedited metabolites of such a simple molecule suggests that the information regarding the metabolism of other drugs may also be incomplete, and therefore, new investigations are necessary.

Nonparametric Inference for Periodic Sequences

KAUST Repository

Sun, Ying

2012-02-01

This article proposes a nonparametric method for estimating the period and values of a periodic sequence when the data are evenly spaced in time. The period is estimated by a "leave-out-one-cycle" version of cross-validation (CV) and complements the periodogram, a widely used tool for period estimation. The CV method is computationally simple and implicitly penalizes multiples of the smallest period, leading to a "virtually" consistent estimator of integer periods. This estimator is investigated both theoretically and by simulation.We also propose a nonparametric test of the null hypothesis that the data have constantmean against the alternative that the sequence of means is periodic. Finally, our methodology is demonstrated on three well-known time series: the sunspots and lynx trapping data, and the El Niño series of sea surface temperatures. © 2012 American Statistical Association and the American Society for Quality.

A Testbed For Validating the LHC Controls System Core Before Deployment

CERN Document Server

Nguyen Xuan, J

2011-01-01

Since the start-up of the LHC, it is crucial to carefully test core controls components before deploying them operationally. The Testbed of the CERN accelerator controls group was developed for this purpose. It contains different hardware (PPC, i386) running various operating systems (Linux and LynxOS) and core software components running on front-ends, communication middleware and client libraries. The Testbed first executes integration tests to verify that the components delivered by individual teams interoperate, and then system tests, which verify high-level, end-user functionality. It also verifies that different versions of components are compatible, which is vital, because not all parts of the operational LHC control system can be upgraded simultaneously. In addition, the Testbed can be used for performance and stress tests. Internally, the Testbed is driven by Atlassian Bamboo, a Continuous Integration server, which builds and deploys automatically new software versions into the Test...

Smoothing Motion Estimates for Radar Motion Compensation.

Energy Technology Data Exchange (ETDEWEB)

Doerry, Armin W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

2017-07-01

Simple motion models for complex motion environments are often not adequate for keeping radar data coherent. Eve n perfect motion samples appli ed to imperfect models may lead to interim calculations e xhibiting errors that lead to degraded processing results. Herein we discuss a specific i ssue involving calculating motion for groups of pulses, with measurements only available at pulse-group boundaries. - 4 - Acknowledgements This report was funded by General A tomics Aeronautical Systems, Inc. (GA-ASI) Mission Systems under Cooperative Re search and Development Agre ement (CRADA) SC08/01749 between Sandia National Laboratories and GA-ASI. General Atomics Aeronautical Systems, Inc. (GA-ASI), an affilia te of privately-held General Atomics, is a leading manufacturer of Remotely Piloted Aircraft (RPA) systems, radars, and electro-optic and rel ated mission systems, includin g the Predator(r)/Gray Eagle(r)-series and Lynx(r) Multi-mode Radar.

An FPGA Based Multiprocessing CPU for Beam Synchronous Timing in CERN's SPS and LHC

CERN Document Server

Ballester, F J; Gras, J J; Lewis, J; Savioz, J J; Serrano, J

2003-01-01

The Beam Synchronous Timing system (BST) will be used around the LHC and its injector, the SPS, to broadcast timing meassages and synchronize actions with the beam in different receivers. To achieve beam synchronization, the BST Master card encodes messages using the bunch clock, with a nominal value of 40.079 MHz for the LHC. These messages are produced by a set of tasks every revolution period, which is every 89 us for the LHC and every 23 us for the SPS, therefore imposing a hard real-time constraint on the system. To achieve determinism, the BST Master uses a dedicated CPU inside its main Field Programmable Gate Array (FPGA) featuring zero-delay hardware task switching and a reduced instruction set. This paper describes the BST Master card, stressing the main FPGA design, as well as the associated software, including the LynxOS driver and the tailor-made assembler.

Manipulating neuronal circuits with endogenous and recombinant cell-surface tethered modulators

Directory of Open Access Journals (Sweden)

Mandë Holford

2009-10-01

Full Text Available Neuronal circuits depend on the precise regulation of cell-surface receptors and ion channels. An ongoing challenge in neuroscience research is deciphering the functional contribution of specific receptors and ion channels using engineered modulators. A novel strategy, termed “tethered toxins”, was recently developed to characterize neuronal circuits using the evolutionary derived selectivity of venom peptide toxins and endogenous peptide ligands, such as lynx1 prototoxins. Herein, the discovery and engineering of cell-surface tethered peptides is reviewed, with particular attention given to their cell-autonomy, modular composition, and genetic targeting in different model organisms. The relative ease with which tethered peptides can be engineered, coupled with the increasing number of neuroactive venom toxins and ligand peptides being discovered, imply a multitude of potentially innovative applications for manipulating neuronal circuits and tissue-specific cell networks, including treatment of disorders caused by malfunction of receptors and ion channels.

Linking movement behavior and fine-scale genetic structure to model landscape connectivity for bobcats (Lynx rufus)

Science.gov (United States)

Dawn M. Reding; Samuel A. Cushman; Todd E. Gosselink; William R. Clark

2013-01-01

Spatial heterogeneity can constrain the movement of individuals and consequently genes across a landscape, influencing demographic and genetic processes. In this study, we linked information on landscape composition, movement behavior, and genetic differentiation to gain a mechanistic understanding of how spatial heterogeneity may influence movement and gene flow of...

NMR Structure and Action on Nicotinic Acetylcholine Receptors of Water-soluble Domain of Human LYNX1

Czech Academy of Sciences Publication Activity Database

Lyukmanova, E. N.; Shenkarev, Z. O.; Shulepko, M. A.; Mineev, K. S.; D´Hoedt, D.; Kasheverov, I. E.; Filkin, S. Yu.; Krivolapova, A. P.; Janíčková, Helena; Doležal, Vladimír; Dolgikh, D. A.; Arseniev, A. S.; Bertrand, D.; Tsetlin, V.I.; Kirpichnikov, M. P.

2011-01-01

Roč. 286, č. 12 (2011), s. 10618-10627 ISSN 0021-9258 R&D Projects: GA ČR(CZ) GA305/09/0681 Institutional research plan: CEZ:AV0Z50110509 Keywords : NMR structure * nicotinic acetylcholine receptor * water-soluble domain Subject RIV: FH - Neurology Impact factor: 4.773, year: 2011

PROFIBUS-DP to G-64 configurable interface

CERN Document Server

Carlier, E; Rochez, J; Serrano, J; CERN. Geneva. SPS and LHC Division

2001-01-01

Since many years, the SL/BT group has developed specific G-64 hardware modules for the control of the fast pulsed magnets. Up to now, the integration of these modules into the accelerator control system has been done using a MIL1553 fieldbus in command/response mode connected to a LynxOS front-end. In 1996 and 1998, recommendations for the use of industrial fieldbuses and programmable logic controllers were issued at CERN. In order to integrate the existing G-64 hardware into this environment based on industrial components, an interface between the G-64 bus and the PROFIBUS-DP fieldbus has been developed. This interface is based on a modular and open hardware architecture with on one side an off-the-shelf industrial, fieldbus independent, interface and on the other side a FPGA (Field Programmable Gate Array). Required functionality has been implemented within the FPGA with VHDL (Very high-speed integrated circuit Hardware Description Language).

Intelligent switches of integrated lightwave circuits with core telecommunication functions

Science.gov (United States)

Izhaky, Nahum; Duer, Reuven; Berns, Neil; Tal, Eran; Vinikman, Shirly; Schoenwald, Jeffrey S.; Shani, Yosi

2001-05-01

We present a brief overview of a promising switching technology based on Silica on Silicon thermo-optic integrated circuits. This is basically a 2D solid-state optical device capable of non-blocking switching operation. Except of its excellent performance (insertion lossvariable output power control (attenuation), for instance, to equalize signal levels and compensate for unbalanced different optical input powers, or to equalize unbalanced EDFA gain curve. We examine the market segments appropriate for the switch size and technology, followed by a discussion of the basic features of the technology. The discussion is focused on important requirements from the switch and the technology (e.g., insertion loss, power consumption, channel isolation, extinction ratio, switching time, and heat dissipation). The mechanical design is also considered. It must take into account integration of optical fiber, optical planar wafer, analog electronics and digital microprocessor controls, embedded software, and heating power dissipation. The Lynx Photon.8x8 switch is compared to competing technologies, in terms of typical market performance requirements.

Replacing PS controls front end minicomputers by VME based 32-bit processors

International Nuclear Information System (INIS)

Gagnaire, A.; Metz Noblat, N. de; Serre, Ch.; Sicard, Cl.H.

1992-01-01

The PS controls have started the first phase of system rejuvenation, targeted towards the LEP Preinjector Controls. The main impact of this phase is in the architectural change, as both the front-end minicomputers and the CAMAC embedded microprocessors are replaced by microprocessor based VME crates called Device Stub Controllers (DSC). This paper discusses the different steps planned for this first phase, i.e: (1) implementing the basic set of CERN Accelerator common facilities for DSCs (error handling, system surveillance, remote boot and network access); (2) porting the equipment access software layer; (3) applying the Real-time tasks to the LynxOS operating system and I/O architecture, conforming to the real-time constraints for control and acquisition; (4) defining the number and contents of the different DSC needed, according to geographical and cpu-load constraints; (5) providing the general services outside the DSC crates (file servers, data-base services); (6) emulating the current Console programs onto the new workstations. (author)

An authentication and authorization infrastructure: The PAPI system

International Nuclear Information System (INIS)

Castro, R.; Lopez, D.R.; Vega, J.

2006-01-01

PAPI is a system for providing access control to restricted information resources across the Internet. It intends to keep authentication as an issue local to the organization the user belongs to, while leaving information providers full control over the resources they offer. The authentication mechanisms are designed to be as flexible as possible, allowing each organization to use its own authentication schema, keeping user privacy, and offering information providers data enough for statistics. Moreover, access control mechanisms are transparent to the user and compatible: with the most commonly employed Web browsers (i.e., Netscape/MSIE/Mozilla/Lynx), with any HTTP based java application solution, and any operating system. This solution is being successfully used in different research organizations in Spain and Europe as a control access system to restricted resources in a transparent and single sign-on way. It is allowing mobile and external users to access to resources that are internal to organizations, contributing to remote participations in results of experiments and inter-institutional resource collaboration

The historical and recent distribution and status of mammals in Portugal

Directory of Open Access Journals (Sweden)

Margarida Santos-Reis

1996-12-01

Full Text Available Abstract Historical and recent data on Portuguese mammals are presented in this paper, occurring on the mainland and/or in the Azores and Madeira Atlantic islands. Nowadays, 95 species of mammals are known in Portugal, of which only one (Nyctalus azoreum is an endemic species and three others (Pipistrellus maderensis, Microtus cabrerae and Lynx pardina are exclusive for Portugal and Spain. Moreover, two other species, Mustela vison and Sciurus vulgaris are recent records for the Portuguese fauna, the first due to an accidental introduction and the second resulting from a recolonization by Spanish populations. Of the remaining species, around 50% (46 species are threatened in different degrees, 34.8% (16 species being considered endangered or vulnerable. Mammals extinct in Portugal are the Gerês goat (Capra pyrenaica lusitanica and the bear (Ursus arctos.

Recognition and Reconstruction of Zebra Crossings on Roads from Mobile Laser Scanning Data

Directory of Open Access Journals (Sweden)

Lin Li

2016-07-01

Full Text Available Zebra crossings provide guidance and warning to pedestrians and drivers, thereby playing an important role in traffic safety management. Most previous studies have focused on detecting zebra stripes but have not provided full information about the areas, which is critical to both driver assistance systems and guide systems for blind individuals. This paper presents a stepwise procedure for recognizing and reconstructing zebra crossings using mobile laser scanning data. First, we propose adaptive thresholding based on road surface partitioning to reduce the impact of intensity unevenness and improve the accuracy of road marking extraction. Then, dispersion degree filtering is used to reduce the noise. Finally, zebra stripes are recognized according to the rectangular feature and fixed size, which is followed by area reconstruction according to arrangement patterns. We test our method on three datasets captured by an Optech Lynx mobile mapping system. The total recognition rate of 90.91% demonstrates the effectiveness of the method.

Evolution in controls methods for the SPS power converters

CERN Document Server

Dinius, A H; Brazier, J C L

1995-01-01

In common with much accelerator specific material, there is a constant need to improve both hardware and software for power converter control. Maintenance and performance improvements of older systems have become extremely tedious and in some areas impossible. By using modern real-time software and the latest high-performance processors, such problems should be substantially reduced. This paper describes the software concepts and the hardware chosen for the upgrade of the existing facilities. Using the UNIX compatible LynxOS real time kernel, running on a PowerPC 603 in a VME environment, this new approach provides excellent performance while retaining the desired flexibility for future enhancements. The 64 channel system is implemented as a set of cooperating processes, several of which are multi-threaded. Processes include analogue function generation, analogue measurement and digital I/O, all of which are accurately scheduled by the accelerator timing system. This generalised structure, which performs comp...

An authentication and authorization infrastructure: The PAPI system

Energy Technology Data Exchange (ETDEWEB)

Castro, R. [Spanish Research Network RedIRIS, Red.es (Edif. Bronce) Plz. Manuel Gomez Moreno s/n, 28020 Madrid (Spain)]. E-mail: rodrigo.castro@rediris.es; Lopez, D.R. [Spanish Research Network RedIRIS, Red.es (Edif. Bronce) Plz. Manuel Gomez Moreno s/n, 28020 Madrid (Spain); Vega, J. [Asociacion EURATOM/CIEMAT, Avda. Complutense no. 22, 28040 Madrid (Spain)

2006-07-15

PAPI is a system for providing access control to restricted information resources across the Internet. It intends to keep authentication as an issue local to the organization the user belongs to, while leaving information providers full control over the resources they offer. The authentication mechanisms are designed to be as flexible as possible, allowing each organization to use its own authentication schema, keeping user privacy, and offering information providers data enough for statistics. Moreover, access control mechanisms are transparent to the user and compatible: with the most commonly employed Web browsers (i.e., Netscape/MSIE/Mozilla/Lynx), with any HTTP based java application solution, and any operating system. This solution is being successfully used in different research organizations in Spain and Europe as a control access system to restricted resources in a transparent and single sign-on way. It is allowing mobile and external users to access to resources that are internal to organizations, contributing to remote participations in results of experiments and inter-institutional resource collaboration.

Evolution of the SPS Power Converter Controls towards the LHC Era

CERN Document Server

Brazier, J.C.L.; Semanaz, P.

2001-01-01

By the end of the nineties, the power converter control system (Mugef) of the CERN proton accelerator (SPS) had undergone a complete modernization. This resulted in newly developed hardware for function generation, measurement and I/O in a VME environment, under the LynxOS real-time operating system. This has provided a platform on which extensions can be developed for future operation in the Large Hadron Collider (LHC) era. This paper describes some of these extensions, in particular a fast Surveillance and Interlock system for monitoring the power converter output currents. This will be mandatory for the safe operation of the SPS transfer lines TI2 & TI8 to LHC and for similar applications in the future. The strategies employed to cope with various failure modes of the power converters and the timely activation of the interlock are outlined. The new SPS controls infrastructure now under development, will give rise to new modes of operation for the Mugef systems. Integration with the proposed middleware ...

High performance message passing for the ATLAS DAQ/EF-1 project

CERN Document Server

Mornacchi, Giuseppe

1999-01-01

Summary form only. A message passing library has been developed in the context of the ATLAS DAQ/EF-1 project. It is used for time critical applications within the front-end part of the DAQ system, mainly to exchange data control messages between I/O processors. Key objectives of the design were low message overheads, efficient use of the data transfer buses, provision of broadcast functionality and a hardware and operating system independent implementation of the application interface. The design and implementation of the message passing library are presented. As required by the project, the implementation is based on commercial components, namely VMEbus, PCI, the Lynx-OS real-time operating system and an additional inter- processor link, PVIC. The latter offers broadcast functionality identified as being important to the overall performance of the message passing. In addition, performance benchmarks for all implementing buses are presented for both simple test programs and the full DAQ applications. (0 refs)...

Control server for the PS orbit acquisition system Status 2009

CERN Document Server

Bart-Pedersen, S; CERN. Geneva. BE Department

2009-01-01

CERN’s Proton Synchrotron (CPS) has been fitted with a new Trajectory Measurement System (TMS). Analogue signals from forty Beam Position Monitors (BPM) are digitized at 125 MS/s, and then further treated in the digital domain to derive positions of all individual particle bunches on the fly. Large FPGAs are used to handle the digital processing. The system fits in fourteen plug-in modules distributed over three half-width cPCI crates that store data in circular buffers. They are connected to a Linux computer by means of a private Gigabit Ethernet segment. Dedicated server software, running under Linux, knits the system into a coherent whole [1]. The corresponding low-level software using FESA (BPMOPS class) was implemented while respecting the standard interface for beam position measurements. The BPMOPS server publishes values on request after data extraction and conversion from the TMS server. This software is running on a VME Lynx-OS platform and through dedicated electronics it can therefore control th...

Game statistics for the island of Olkiluoto in 2010-2011

International Nuclear Information System (INIS)

Nieminen, M.; Niemi, M.; Jussila, I.

2011-10-01

The game statistics for the island of Olkiluoto were updated in the summer 2011 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2010-2011. The moose population is stable when compared with the previous year. The white-tailed deer population is stable or slightly increasing when compared with the previous year. The changes in the roe deer population are not accurately known, but population size varies somewhat from year to year. The number of hunted raccoon dogs approximately doubled in the latest hunting season. Altogether two waterfowl were hunted in 2010 (17 in the previous year). The populations of mountain hare and red squirrel are abundant, and the number of hunted mountain hares approximately doubled when compared with the previous hunting season. The brown hare population is still small. In the winter, there were observations of one lynx spending time in the area. (orig.)

Game statistics for the island of Olkiluoto in 2010-2011

Energy Technology Data Exchange (ETDEWEB)

Nieminen, M. [Faunatica Oy, Espoo (Finland); Niemi, M. [Helsinki Univ. (Finland), Dept. of Forest Sciences; Jussila, I. [Turku Univ. (Finland), Satakunta Environmental Research Inst.

2011-10-15

The game statistics for the island of Olkiluoto were updated in the summer 2011 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2010-2011. The moose population is stable when compared with the previous year. The white-tailed deer population is stable or slightly increasing when compared with the previous year. The changes in the roe deer population are not accurately known, but population size varies somewhat from year to year. The number of hunted raccoon dogs approximately doubled in the latest hunting season. Altogether two waterfowl were hunted in 2010 (17 in the previous year). The populations of mountain hare and red squirrel are abundant, and the number of hunted mountain hares approximately doubled when compared with the previous hunting season. The brown hare population is still small. In the winter, there were observations of one lynx spending time in the area. (orig.)

Electronic system for the automation of current measurements produced by ionization chambers

International Nuclear Information System (INIS)

Brancaccio, Franco; Dias, Mauro da Silva

2002-01-01

Ionization Chambers in current mode operation are usually used in Nuclear Metrology in the determination of radionuclide activity. For this purpose measurements of very low ionization currents, in the range of 10 -8 to 10 -14 A, are required. Usually, electrometers perform the current integration method under command of signals from an automation system, in order to reduce the measurement uncertainties. In the present work, an automation system, developed for current integration measurements at the Laboratorio de Metrologia Nuclear (LMN) of Instituto de Pesquisas Energeticas e Nucleares (IPEN), is described. This automation system is composed by software (graphic interface and control) and an electronic module connected to a microcomputer, by means of a commercial data acquisition card CAD12/32 (LYNX Tecnologia Eletronica Ltda.). Measurements, using an electrometer Keithley 616 (Keithley Instruments, Inc) and an ionization chamber IG12/A20 (20 th Century Electronics Ltd.), were performed in order to check the system and for validating the project. (author)

A Modular VME Data Acquisition System for Counter Applications at the GSI Synchrotron

CERN Document Server

Liakin, D A

2003-01-01

Particle counters perform the control of beam loss and slowly extracted currents at the heavy ion synchrotron (SIS) at GSI. A new VME/Lynx - PC/Linux based data acquisition system has been developed to combine the operating purposes beam loss measurement, spill analysis, spill structure measurement and matrix switching functionality in one single assembly. In this paper a detailed PC-side software description is presented. To achieve best system stability, the software has been divided into time critical networking and data deploying threads and low or normal priority interface tasks. Some new abilities in the fields of data computation and presentation are reported. A hardware description is presented, in detail a programmable GSI-EVENT controller, which is based on an ordinary 8 bit RISC microprocessor and which has been integrated into the system, to synchronize the data acquisition with the sophisticated “virtual accelerator” timing at GSI. First experiences gained while the commission...

Výskyt velkých šelem – rysa ostrovida (Lynx lynx), vlka obecného (Canis lupus) a medvěda hnědého (Ursus arctos) – a kočky divoké (Felis silvestris)\

Czech Academy of Sciences Publication Activity Database

Kutal, M.; Belotti, E.; Volfová, J.; Mináriková, T.; Bufka, L.; Poledník, L.; Krojerová, Jarmila; Bojda, M.; Váňa, M.; Kutalová, L.; Beneš, J.; Flousek, J.; Tomášek, V.; Kafka, P.; Poledníková, K.; Pospíšková, J.; Dekař, P.; Machciník, B.; Koubek, Petr; Duľa, M.

2017-01-01

Roč. 48, č. 48 (2017), s. 93-107 ISSN 0024-7774 Institutional support: RVO:68081766 Keywords : Large carnivores * species distribution * Central Europe * trans-boundary populations Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology

Los felinos: ¿Una alternativa en estudios de toxicología genética?

Directory of Open Access Journals (Sweden)

Ana Zamora-Perez

2008-06-01

results and also lion (Panthera leo, yaguaroundi (Felis yagoaroundi, lynx (Lynx ruffus, jaguar (Panthera onca, puma (Puma concolor, tiger (Panthera tigris, ocelote (Felis padalis and leopard (Panthera pardus display spontaneous MNE, and with this characteristic this Family can be propose like a potential group to be used in toxicogenetic studies. Rev. Biol. Trop. 56 (2: 969-974. Epub 2008 June 30.

DNA analysis of hair and scat collected along snow tracks to document the presence of Canada Lynx.

Science.gov (United States)

Kevin S. McKelvey; Jeffrey von Kienast; Keith B. Aubry; Gary M. Koehler; Bejamin T. Maletzke; John R. Squires; Edward L. Lindquist; Steve Loch; Michael K. Schwartz

2006-01-01

Snow tracking is often used to inventory carnivore communities, but species identification using this method can produce ambiguous and misleading results. DNA can be extracted from hair and scat samples collected from tracks made in snow. Using DNA analysis could allow positive track identification across a broad range of snow conditions, thus increasing survey...

Toward a defensible lynx conservation strategy: A framework for planning in the face of uncertainty [Chapter 1

Science.gov (United States)

Leonard F. Ruggiero; Kevin S. McKelvey

2000-01-01

On April 2, 1993, the incumbent U.S. President traveled to Portland, Oregon, to intervene in a national political crisis engendered by public concern over the conservation of native wildlife on public lands. Environmentalists had successfully used existing statutes, most notably the National Forest Management Act and pursuant regulations, to shut down timber industry...

Conservation of lynx in the United States: A systematic approach to closing critical knowledge gaps [Chapter 17

Science.gov (United States)

Keith B. Aubry; Leonard F. Ruggiero; John R. Squires; Kevin S. McKelvey; Gary M. Koehler; Steven W. Buskirk; Charles J. Krebs

2000-01-01

Large-scale ecological studies and assessments are often implemented only after the focus of study generates substantial social, political, or legal pressure to take action (e.g., Thomas et al. 1990; Ruggiero et al. 1991; FEMAT 1993). In such a funding environment, the coordinated planning of research may suffer as the pressure to produce results escalates. To avoid...

Changes in the geographical distribution and abundance of the tick Ixodes ricinus during the past 30 years in Sweden

Directory of Open Access Journals (Sweden)

Jaenson Thomas GT

2012-01-01

respondents, the abundance of ticks had increased markedly in LB- and TBE-endemic areas in South (Götaland and Central Sweden. Conclusions The results suggest that I. ricinus has expanded its range in North Sweden and has become distinctly more abundant in Central and South Sweden during the last three decades. However, in the northern mountain region I. ricinus is still absent. The increased abundance of the tick can be explained by two main factors: First, the high availability of large numbers of important tick maintenance hosts, i.e., cervids, particularly roe deer (Capreolus capreolus during the last three decades. Second, a warmer climate with milder winters and a prolonged growing season that permits greater survival and proliferation over a larger geographical area of both the tick itself and deer. High reproductive potential of roe deer, high tick infestation rate and the tendency of roe deer to disperse great distances may explain the range expansion of I. ricinus and particularly the appearance of new TBEV foci far away from old TBEV-endemic localities. The geographical presence of LB in Sweden corresponds to the distribution of I. ricinus. Thus, LB is now an emerging disease risk in many parts of North Sweden. Unless countermeasures are undertaken to keep the deer populations, particularly C. capreolus and Dama dama, at the relatively low levels that prevailed before the late 1970s - especially in and around urban areas where human population density is high - by e.g. reduced hunting of red fox (Vulpes vulpes and lynx (Lynx lynx, the incidences of human LB and TBE are expected to continue to be high or even to increase in Sweden in coming decades.

Changes in the geographical distribution and abundance of the tick Ixodes ricinus during the past 30 years in Sweden.

Science.gov (United States)

Jaenson, Thomas G T; Jaenson, David G E; Eisen, Lars; Petersson, Erik; Lindgren, Elisabet

2012-01-10

markedly in LB- and TBE-endemic areas in South (Götaland) and Central Sweden. The results suggest that I. ricinus has expanded its range in North Sweden and has become distinctly more abundant in Central and South Sweden during the last three decades. However, in the northern mountain region I. ricinus is still absent. The increased abundance of the tick can be explained by two main factors: First, the high availability of large numbers of important tick maintenance hosts, i.e., cervids, particularly roe deer (Capreolus capreolus) during the last three decades. Second, a warmer climate with milder winters and a prolonged growing season that permits greater survival and proliferation over a larger geographical area of both the tick itself and deer. High reproductive potential of roe deer, high tick infestation rate and the tendency of roe deer to disperse great distances may explain the range expansion of I. ricinus and particularly the appearance of new TBEV foci far away from old TBEV-endemic localities. The geographical presence of LB in Sweden corresponds to the distribution of I. ricinus. Thus, LB is now an emerging disease risk in many parts of North Sweden. Unless countermeasures are undertaken to keep the deer populations, particularly C. capreolus and Dama dama, at the relatively low levels that prevailed before the late 1970s--especially in and around urban areas where human population density is high--by e.g. reduced hunting of red fox (Vulpes vulpes) and lynx (Lynx lynx), the incidences of human LB and TBE are expected to continue to be high or even to increase in Sweden in coming decades.

Rail Track Detection and Modelling in Mobile Laser Scanner Data

Directory of Open Access Journals (Sweden)

S. Oude Elberink

2013-10-01

Full Text Available We present a method for detecting and modelling rails in mobile laser scanner data. The detection is based on the properties of the rail tracks and contact wires such as relative height, linearity and relative position with respect to other objects. Points classified as rail track are used in a 3D modelling algorithm. The modelling is done by first fitting a parametric model of a rail piece to the points along each track, and estimating the position and orientation parameters of each piece model. For each position and orientation parameter a smooth low-order Fourier curve is interpolated. Using all interpolated parameters a mesh model of the rail is reconstructed. The method is explained using two areas from a dataset acquired by a LYNX mobile mapping system in a mountainous area. Residuals between railway laser points and 3D models are in the range of 2 cm. It is concluded that a curve fitting algorithm is essential to reliably and accurately model the rail tracks by using the knowledge that railways are following a continuous and smooth path.

Cosmic veto gamma-spectrometry for Comprehensive Nuclear-Test-Ban Treaty samples

International Nuclear Information System (INIS)

Burnett, J.L.; Davies, A.V.

2014-01-01

The Comprehensive Nuclear-Test-Ban Treaty (CTBT) is supported by a global network of monitoring stations that perform high-resolution gamma-spectrometry on air filter samples for the identification of 85 radionuclides. At the UK CTBT Radionuclide Laboratory (GBL15), a novel cosmic veto gamma-spectrometer has been developed to improve the sensitivity of station measurements, providing a mean background reduction of 80.8% with mean MDA improvements of 45.6%. The CTBT laboratory requirement for a 140 Ba MDA is achievable after 1.5 days counting compared to 5–7 days using conventional systems. The system consists of plastic scintillation plates that detect coincident cosmic-ray interactions within an HPGe gamma-spectrometer using the Canberra Lynx TM multi-channel analyser. The detector is remotely configurable using a TCP/IP interface and requires no dedicated coincidence electronics. It would be especially useful in preventing false-positives at remote station locations (e.g. Halley, Antarctica) where sample transfer to certified laboratories is logistically difficult. The improved sensitivity has been demonstrated for a CTBT air filter sample collected after the Fukushima incident

Further development of a cosmic veto gamma-spectrometer

International Nuclear Information System (INIS)

Burnett, J.L.; Davies, A.V.; McLarty, J.L.

2013-01-01

The Comprehensive Nuclear-Test-Ban Treaty (CTBT) is supported by a network of certified laboratories that perform high-resolution gamma-spectrometry on global air filter samples for the identification of 85 radionuclides. At the UK CTBT Radionuclide Laboratory (GBL15), a novel cosmic veto gamma-spectrometer has been developed to improve the sensitivity of measurements for treaty compliance. The system consists of plastic scintillation plates operated in time-stamp mode to detect coincident cosmic-ray interactions within an HPGe gamma-spectrometer. This provides a mean background reduction of 75.2 % with MDA improvements of 45.6 %. The CTBT requirement for a 140 Ba MDA is achievable after 1.5 days counting compared to 5-7 days using conventional systems. The system does not require dedicated coincidence electronics, and remains easily configurable with dual acquisition of unsuppressed and suppressed spectra. Performance has been significantly improved by complete processing of the cosmic-ray spectrum (0-25 MeV) combined with the Canberra Lynx TM multi-channel analyser. The improved sensitivity has been demonstrated for a CTBT air filter sample collected after the Fukushima incident. (author)

Cosmic veto gamma-spectrometry for Comprehensive Nuclear-Test-Ban Treaty samples

Science.gov (United States)

Burnett, J. L.; Davies, A. V.

2014-05-01

The Comprehensive Nuclear-Test-Ban Treaty (CTBT) is supported by a global network of monitoring stations that perform high-resolution gamma-spectrometry on air filter samples for the identification of 85 radionuclides. At the UK CTBT Radionuclide Laboratory (GBL15), a novel cosmic veto gamma-spectrometer has been developed to improve the sensitivity of station measurements, providing a mean background reduction of 80.8% with mean MDA improvements of 45.6%. The CTBT laboratory requirement for a 140Ba MDA is achievable after 1.5 days counting compared to 5-7 days using conventional systems. The system consists of plastic scintillation plates that detect coincident cosmic-ray interactions within an HPGe gamma-spectrometer using the Canberra LynxTM multi-channel analyser. The detector is remotely configurable using a TCP/IP interface and requires no dedicated coincidence electronics. It would be especially useful in preventing false-positives at remote station locations (e.g. Halley, Antarctica) where sample transfer to certified laboratories is logistically difficult. The improved sensitivity has been demonstrated for a CTBT air filter sample collected after the Fukushima incident.

DATE V1 - Data Aquisition Test Environment Users Manual

CERN Document Server

Grandegger, W; CERN. Geneva

1996-01-01

The Data Aquisition presented here has been developed for maximum portability and generality. If you are lucky you will have tailored the system to your experimental set-up in less than a day and start taking data. It should run any UNIX system and some non-UNIX system and has already been tested on the following systems: Linux (IBM PC and compatible) OSF (Alpha workstations and Medulla VME board) HP-UX (workstation + 743 VME board) HP-RT AIX OS91) LynxOS (tested on a 68040 and a PowerPC) 1) The system was originally developed under UNIX. Only due to popular request of people who wanted to reuse old hardware it was ported to OS9. This is, however, not the recommended hardware and future improvements of the system are not going to be refitted to OS9. Currently we distribute only the OS9 and HP-UX binary versions, but you get the code and can compile it on any of the above systems and with some luck on others.

On the selection of ordinary differential equation models with application to predator-prey dynamical models.

Science.gov (United States)

Zhang, Xinyu; Cao, Jiguo; Carroll, Raymond J

2015-03-01

We consider model selection and estimation in a context where there are competing ordinary differential equation (ODE) models, and all the models are special cases of a "full" model. We propose a computationally inexpensive approach that employs statistical estimation of the full model, followed by a combination of a least squares approximation (LSA) and the adaptive Lasso. We show the resulting method, here called the LSA method, to be an (asymptotically) oracle model selection method. The finite sample performance of the proposed LSA method is investigated with Monte Carlo simulations, in which we examine the percentage of selecting true ODE models, the efficiency of the parameter estimation compared to simply using the full and true models, and coverage probabilities of the estimated confidence intervals for ODE parameters, all of which have satisfactory performances. Our method is also demonstrated by selecting the best predator-prey ODE to model a lynx and hare population dynamical system among some well-known and biologically interpretable ODE models. © 2014, The International Biometric Society.

Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore

Science.gov (United States)

Fountain-Jones, Nicholas M.; Craft, Meggan E.; Funk, W. Chris; Kozakiewicz, Chris; Trumbo, Daryl; Boydston, Erin E.; Lyren, Lisa M.; Crooks, Kevin R.; Lee, Justin S.; VandeWoude, Sue; Carver, Scott

2017-01-01

Urban expansion has widespread impacts on wildlife species globally, including the transmission and emergence of infectious diseases. However, there is almost no information about how urban landscapes shape transmission dynamics in wildlife. Using an innovative phylodynamic approach combining host and pathogen molecular data with landscape characteristics and host traits, we untangle the complex factors that drive transmission networks of Feline Immunodeficiency Virus (FIV) in bobcats (Lynx rufus). We found that the urban landscape played a significant role in shaping FIV transmission. Even though bobcats were often trapped within the urban matrix, FIV transmission events were more likely to occur in areas with more natural habitat elements. Urban fragmentation also resulted in lower rates of pathogen evolution, possibly owing to a narrower range of host genotypes in the fragmented area. Combined, our findings show that urban landscapes can have impacts on a pathogen and its evolution in a carnivore living in one of the most fragmented and urban systems in North America. The analytical approach used here can be broadly applied to other host-pathogen systems, including humans.

Upgrading NASA/DOSE laser ranging system control computers

Science.gov (United States)

Ricklefs, Randall L.; Cheek, Jack; Seery, Paul J.; Emenheiser, Kenneth S.; Hanrahan, William P., III; Mcgarry, Jan F.

1993-01-01

Laser ranging systems now managed by the NASA Dynamics of the Solid Earth (DOSE) and operated by the Bendix Field Engineering Corporation, the University of Hawaii, and the University of Texas have produced a wealth on interdisciplinary scientific data over the last three decades. Despite upgrades to the most of the ranging station subsystems, the control computers remain a mix of 1970's vintage minicomputers. These encompass a wide range of vendors, operating systems, and languages, making hardware and software support increasingly difficult. Current technology allows replacement of controller computers at a relatively low cost while maintaining excellent processing power and a friendly operating environment. The new controller systems are now being designed using IBM-PC-compatible 80486-based microcomputers, a real-time Unix operating system (LynxOS), and X-windows/Motif IB, and serial interfaces have been chosen. This design supports minimizing short and long term costs by relying on proven standards for both hardware and software components. Currently, the project is in the design and prototyping stage with the first systems targeted for production in mid-1993.

Application of the Scalable Coherent Interface to Data Acquisition at LHC

CERN Multimedia

2002-01-01

RD24 : The RD24 activities in 1996 were dominated by test and integration of PCI-SCI bridges for VME-bus and for PC's for the 1996 milestones. In spite of the dispersion of RD24 membership into the ATLAS, ALICE and the proposed LHC-B experiments, collaboration and sharing of resources of SCI laboratories and equipment continued with excellent results and several doctoral theses. The availability of cheap PCI-SCI adapters has allowed construction of VME multicrate testbenches based on a variety of VME processors and work-stations. Transparent memory-to-memory accesses between remote PCI buses over SCI have been established under the Linux, Lynx-OS and Windows-NT operating systems as a proof that scalable multicrate systems are ready to be implemented with off-the-shelf products. Commercial SCI-PCI adapters are based on a PCI-SCI ASIC from Dolphin. The FPGA based PCI-SCI adapter, designed by CERN and LBL for data acquisition at LHC and STAR allows addition of DAQ functions. The step from multicrate systems towa...

Cosmic veto gamma-spectrometry for Comprehensive Nuclear-Test-Ban Treaty samples

Energy Technology Data Exchange (ETDEWEB)

Burnett, J.L., E-mail: jonathan.burnett@awe.co.uk; Davies, A.V.

2014-05-21

The Comprehensive Nuclear-Test-Ban Treaty (CTBT) is supported by a global network of monitoring stations that perform high-resolution gamma-spectrometry on air filter samples for the identification of 85 radionuclides. At the UK CTBT Radionuclide Laboratory (GBL15), a novel cosmic veto gamma-spectrometer has been developed to improve the sensitivity of station measurements, providing a mean background reduction of 80.8% with mean MDA improvements of 45.6%. The CTBT laboratory requirement for a {sup 140}Ba MDA is achievable after 1.5 days counting compared to 5–7 days using conventional systems. The system consists of plastic scintillation plates that detect coincident cosmic-ray interactions within an HPGe gamma-spectrometer using the Canberra Lynx{sup TM} multi-channel analyser. The detector is remotely configurable using a TCP/IP interface and requires no dedicated coincidence electronics. It would be especially useful in preventing false-positives at remote station locations (e.g. Halley, Antarctica) where sample transfer to certified laboratories is logistically difficult. The improved sensitivity has been demonstrated for a CTBT air filter sample collected after the Fukushima incident.

Mercury accumulation in native mammals of the Southeast

Energy Technology Data Exchange (ETDEWEB)

Cumbie, P.M.; Jenkins, J.H.

1974-01-01

Mercury levels in tissues of mammals collected in Georgia, Florida, and South Carolina were compared using hair mercury concentration as an index of total mercury content. Bobcats (Lynx rufus), raccoons (Procyon lotor), opossum (Didelphis marsupialis) and gray fox (Urocyon cinereoargenteus) from the Lower Coastal Plain of Georgia had higher mercury levels than specimens from the Upper Coastal Plain or Piedmont. The highest individual mercury levels in raccoons and bobcats occurred in specimens from the Georgia Lower Coastal Plain flatwoods. Skeletal muscle and liver of individual raccoons and bobcats taken in the coastal flatwoods exceeded the 0.5 ppm limit for mercury in human foodstuffs. No pattern of mercury accumulation was detected in white-tailed deer (Odocoileus virginianus). Hair analysis revealed elevated mercury levels in mammals from a region exposed to mercury pollution. Mercury levels in wildlife exhibit a pattern similar to that of certain fallout radioisotopes such as /sub 137/Cs. These observations indicate that significant biomagnification of mercury may occur in native mammals in certain southeastern habitats. 28 references, 6 tables.

Molecular evidence of shared hookworm Ancylostoma tubaeforme haplotypes between the critically endangered Iberian lynx and sympatric domestic cats

Czech Academy of Sciences Publication Activity Database

Millán, J.; Blasco-Costa, Maria Isabel

2012-01-01

Roč. 186, 3-4 (2012), s. 518-522 ISSN 0304-4017 Institutional support: RVO:60077344 Keywords : Ancylostomiasis * Hookworm * Reservoir * Spain Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.381, year: 2012 http://www.sciencedirect.com/science/article/pii/S030440171100759X#

Detection of Perkinsus marinus in the oyster Crassostrea rhizophorae in southern Bahia by proteomic analysis

Directory of Open Access Journals (Sweden)

Thiago Ramos Pinto

2017-01-01

Full Text Available This study reports the presence of the pathogen Perkinsus marinus, notifiable to the World Organization for Animal Health (Office International des Èpizooties = OIE in the oyster Crassostrea rhizophorae in southern Bahia via proteomic analysis. We analyzed Crassostrea brasiliana from a long-line cultivation system and C. rhizophorae from an adjacent mangrove in Porto do Campo, Camamu Bay, Bahia, Brazil. The collections (n = 100 were performed in October 2012. In the laboratory, the oysters were measured and opened to remove the meat, which was steeped in dry ice. For extraction of proteins, adaptation of a protocol used for mussels was used, after which separation in the first dimension was taken by isoelectric focusing (IEF. The peptides were transferred to a Mass Spectrometer. The obtained spectra were analyzed with the ProteinLynx Global Server 4.2 software tool and also by MASCOT (Matrix Science and compared to the databases of the SWISSPROT and NCBI, respectively. The identification was evidenced by beta-tubulin, Perkinsus marinus ATCC 50983 and protein homology code in the database NCBI = gi | 294889481. This is the first record of P. marinus in Bahia and the fourth in Brazil.

Postmortem evaluation of reintroduced migratory whooping cranes in eastern North America.

Science.gov (United States)

Cole, Gretchen A; Thomas, Nancy J; Spalding, Marilyn; Stroud, Richard; Urbanek, Richard P; Hartup, Barry K

2009-01-01

Reintroduction of endangered Whooping Cranes (Grus americana) in eastern North America has successfully established a migratory population between Wisconsin and Florida. Eighty birds (47 males, 33 females) were released between 2001 and 2006, and all birds were tracked following release with satellite and/or VHF monitoring devices. By the end of 2006, 17 deaths (12 males, five females) were recorded from this population. Postmortem findings and field data were evaluated for each bird to determine the cause of death. Causes included predation (n=8, 47%), trauma (n=2, 12%), and degenerative disease (n=1, 6%); the cause of death was undetermined for 35% (n=6) of the birds. Based on physical evidence, the primary predator of the birds was the bobcat (Lynx rufus). Limited roosting habitat availability or bird behavior were likely prime factors in the occurrence of predation. Traumatic injuries and mortality were caused by gunshot, electrical utility lines, and an unknown source. The lone case of degenerative disease was due to chronic exertional myopathy associated with translocation. Available postmortem testing did not indicate the presence of infectious disease in this limited sample.

Speed of light exceeded in 31st CERN Relay

CERN Multimedia

2001-01-01

In the closest-ever finish of the CERN relay race, Florian Marinet (number 54) of the Neutrinos to Gran Sasso team just fails to catch Pierre Maesen of The Shabbys on the line. The AThLetic AceS team (number 76) won the Veterans category by just 3 seconds from long-time participants The Lynx Runners, who didn't leave empty handed. They picked up the cup that is drawn at random. Evidence for new physics? No, simply evidence for faster legs. Only at CERN could the speed of light come third to a team called The Shabbys. But that's exactly what happened on Wednesday 23 May when the team from PS Division lifted the Opitz cup after winning the 31st CERN relay race. The Shabbys sped home in 10 minutes 53 seconds, just 0.3 of a second ahead of the 'Neutrinos to Gran Sasso' team. There's some logic there since it is the PS complex that will provide the protons that will give rise to the neutrino beam. As for 'c0 the speed of light', they took a relatively leisurely 11 minutes 1.6 seconds to cover the course. A total...

The equipment access software for a distributed UNIX-based accelerator control system

International Nuclear Information System (INIS)

Trofimov, Nikolai; Zelepoukine, Serguei; Zharkov, Eugeny; Charrue, Pierre; Gareyte, Claire; Poirier, Herve

1994-01-01

This paper presents a generic equipment access software package for a distributed control system using computers with UNIX or UNIX-like operating systems. The package consists of three main components, an application Equipment Access Library, Message Handler and Equipment Data Base. An application task, which may run in any computer in the network, sends requests to access equipment through Equipment Library calls. The basic request is in the form Equipment-Action-Data and is routed via a remote procedure call to the computer to which the given equipment is connected. In this computer the request is received by the Message Handler. According to the type of the equipment connection, the Message Handler either passes the request to the specific process software in the same computer or forwards it to a lower level network of equipment controllers using MIL1553B, GPIB, RS232 or BITBUS communication. The answer is then returned to the calling application. Descriptive information required for request routing and processing is stored in the real-time Equipment Data Base. The package has been written to be portable and is currently available on DEC Ultrix, LynxOS, HPUX, XENIX, OS-9 and Apollo domain. ((orig.))

West Foster Creek Expansion Project 2007 HEP Report.

Energy Technology Data Exchange (ETDEWEB)

Ashley, Paul R.

2008-02-01

During April and May 2007, the Columbia Basin Fish and Wildlife Authority's (CBFWA) Regional HEP Team (RHT) conducted baseline Habitat Evaluation Procedures (HEP) (USFWS 1980, 1980a) analyses on five parcels collectively designated the West Foster Creek Expansion Project (3,756.48 acres). The purpose of the HEP analyses was to document extant habitat conditions and to determine how many baseline/protection habitat units (HUs) to credit Bonneville Power Administration (BPA) for funding maintenance and enhancement activities on project lands as partial mitigation for habitat losses associated with construction of Grand Coulee and Chief Joseph Dams. HEP evaluation models included mule deer (Odocoileus hemionus), western meadowlark (Sturnella neglecta), sharp-tailed grouse, (Tympanuchus phasianellus), Bobcat (Lynx rufus), mink (Neovison vison), mallard (Anas platyrhynchos), and black-capped chickadee (Parus atricapillus). Combined 2007 baseline HEP results show that 4,946.44 habitat units were generated on 3,756.48 acres (1.32 HUs per acre). HEP results/habitat conditions were generally similar for like cover types at all sites. Unlike crediting of habitat units (HUs) on other WDFW owned lands, Bonneville Power Administration received full credit for HUs generated on these sites.

A study on the fusion reactor - Design study for tokamak control system

Energy Technology Data Exchange (ETDEWEB)

Ko, In Soo; Nam, Kung Won; Cho, Moo Hyun; Kim, Ji Hwa; Kim, Jae Myung; Kim, Sung Chul; Lee, Ki Sun [Pohang University of Science and Technology, Pohang (Korea, Republic of)

1996-09-01

Based on the experience accumulated during the construction of Pohang Light Source, we strongly suggest that the control system must have a hierarchical structure linked with multiple ethernets. Some UNIX-based workstation are recommended in the top layer where KSTAR operators are faced with several control/monitoring windows. As a supervisors to individual subsystem, realtime computers such as VME system are recommended. Choice of realtime operating system is up to the actual developer. However, we strongly suggest to use Lynx which is UNIX-based realtime OS and is getting more attentions after its introduction in the market. Graphic interface for operators will be developed by adopting development toolkit such as RTWorks and EPICS. We also recommend to use EPICS because it is introduced by Los Alamos National Laboratory, U. S. A. and several laboratories around world are now adopting it to their control system. This report is also pointing out several key issues relating the system development. Among them are the cabling plan, signal list, and noise suppressions. It is also suggested that early decision of communication protocol will help to integrated control system in the future. 11 refs., 5 tabs., 4 figs. (author)

Black hole-galaxy co-evolution in the Mufasa simulations

Science.gov (United States)

Dave, Romeel; Angles-Alcazar, Daniel

2017-08-01

The Mufasa simulations are large-scale cosmological and zoom simulations of galaxy formation that employ novel state of the art modules for star formation and feedback physics, resulting in very good agreement with many key galaxy observables over most of cosmic time. We have recently included black hole growth and feedback using the torque-limited accretion model, which has several advantages over the commonly-used Bondi accretion. We also include AGN feedback using a BAL mode at high Eddington rates and low black hole masses, and a jet mode at low Eddington rates that successfully quenches galaxies. In this talk I will describe preliminary results of the AGN population and its evolution over cosmic time within our new simulations, including cosmological simulations of the general black hole population as well as zoom simulations targeting massive galaxies, with a focus on understanding the co-growth of black holes and galaxies as a function of mass, environment, and cosmic epoch. I will also discuss multi-wavelength approaches to testing and constraining our black hole model in particular using upcoming X-ray and radio facilities such as Lynx and the SKA.

Infusing considerations of trophic dependencies into species distribution modelling.

Science.gov (United States)

Trainor, Anne M; Schmitz, Oswald J

2014-12-01

Community ecology involves studying the interdependence of species with each other and their environment to predict their geographical distribution and abundance. Modern species distribution analyses characterise species-environment dependency well, but offer only crude approximations of species interdependency. Typically, the dependency between focal species and other species is characterised using other species' point occurrences as spatial covariates to constrain the focal species' predicted range. This implicitly assumes that the strength of interdependency is homogeneous across space, which is not generally supported by analyses of species interactions. This discrepancy has an important bearing on the accuracy of inferences about habitat suitability for species. We introduce a framework that integrates principles from consumer-resource analyses, resource selection theory and species distribution modelling to enhance quantitative prediction of species geographical distributions. We show how to apply the framework using a case study of lynx and snowshoe hare interactions with each other and their environment. The analysis shows how the framework offers a spatially refined understanding of species distribution that is sensitive to nuances in biophysical attributes of the environment that determine the location and strength of species interactions. © 2014 John Wiley & Sons Ltd/CNRS.

Virological Survey in free-ranging wildcats (Felis silvestris) and feral domestic cats in Portugal.

Science.gov (United States)

Duarte, A; Fernandes, M; Santos, N; Tavares, L

2012-08-17

To determine the presence of viral pathogens in natural areas a survey was conducted on an opportunistic sample of fifty eight wild (Felis silvestris silvestris) and feral cats (F. s. catus). The biological materials included serum, lung tissue extract and stool. Feline leukemia virus p27 antigen was detected in 13/50 serum/lung tissue extract samples (26%), canine distemper virus antibodies were detected in 2/26 serum/lung tissue extract samples (7.7%), feline coronavirus RNA was present in 6/29 stool samples (20.7%) and feline parvovirus DNA in 2/29 stool samples (6.9%). Canine distemper virus RNA was not detected. Feline immunodeficiency virus and feline coronavirus antibodies were not detected. Evidence of exposure to feline leukemia virus, canine distemper virus, feline coronavirus and feline parvovirus was found in wild and feral cats raising the importance of performing a comprehensive survey to correctly evaluate the potential threat of infectious diseases to endangered species, namely to the wildcat and to the Iberian lynx, which is meant to be reintroduced after 2012 in Portugal. Copyright © 2012 Elsevier B.V. All rights reserved.

Data from camera surveys identifying co-occurrence and occupancy linkages between fishers (Pekania pennanti, rodent prey, mesocarnivores, and larger predators in mixed-conifer forests

Directory of Open Access Journals (Sweden)

Rick A. Sweitzer

2016-03-01

Full Text Available These data provide additional information relevant to the frequency of fisher detections by camera traps, and single-season occupancy and local persistence of fishers in small patches of forest habitats detailed elsewhere, “Landscape Fuel Reduction, Forest Fire, and Biophysical Linkages to Local Habitat Use and Local Persistence of Fishers (Pekania pennanti in Sierra Nevada Mixed-conifer Forests” [10]. The data provides insight on camera trap detections of 3 fisher predators (bobcat [Lynx rufus]. Coyote [Canis latrans], mountain lion [Puma concolor], 5 mesocarnivores in the same foraging guild as fishers (gray fox [Urocyon cinereoargenteus] ringtail [Bassariscus astutus], marten [Martes americana], striped skunk [Mephitis mephitis] spotted skunk [Spilogale gracilis], and 5 Sciuridae rodents that fishers consume as prey (Douglas squirrel [Tamiasciurus douglasii], gray squirrel [Sciurus griseus], northern flying squirrel [Glaucomys sabrinus], long-eared chipmunk [Neotamias quadrimaculatus], California ground squirrel [Spermophilus beecheyi]. We used these data to identify basic patterns of co-occurrence with fishers, and to evaluate the relative importance of presence of competing mesocarnivores, rodent prey, and predators for fisher occupancy of small, 1 km2 grid cells of forest habitat. Keywords: Carnivores, Competition, Distribution, Foraging guild, Predation, Tree squirrels

Relay Runners Catch The Rays

CERN Multimedia

2004-01-01

Athletes sizzled around CERN on Wednesday 19 May at the 34th annual relay race. On one of the warmest days of the year so far, sunkissed competitors ran for the finish line and then straight for the drinks table. The Shabbys were on fire again, hurtling across the line first in a time of 10 min. 42.6 sec. and making an even stronger claim to being hailed as the traditional winners of the race with their fourth triumph in a row. Also on form were the Lynx Runners who won the Veteran's trophy, continuing their winning ways since 2002 and placing 29th overall. Ildefons Magrans of the ALICE Quarks on the Loose team ran the fastest 1000m in a time of 2 min. 47 sec. Second-placed Charmilles Technologies won the Open category in a time of 11 min. 03 sec., taking the prize for teams whose members work in different departments or who come from outside CERN. The OPALadies won the women's trophy and placed 48th. With 9 trophies up for grabs, more than 300 people in 55 teams ran the fun run, covering distances of 1000m ...

Human neuroglobin protein in cerebrospinal fluid

Directory of Open Access Journals (Sweden)

Whalen Gail

2005-02-01

Full Text Available Abstract Background Neuroglobin is a hexacoordinated member of the globin family of proteins. It is predominantly localized to various brain regions and retina where it may play a role in protection against ischemia and nitric oxide-induced neural injury. Cerebrospinal fluid was collected from 12 chronic regional or systemic pain and 5 control subjects. Proteins were precipitated by addition of 50% 0.2 N acetic acid, 50% ethanol, 0.02% sodium bisulfite. The pellet was extensively digested with trypsin. Peptides were separated by capillary liquid chromatography using a gradient from 95% water to 95% acetonitrile in 0.2% formic acid, and eluted through a nanoelectrospray ionization interface into a quadrapole – time-of-flight dual mass spectrometer (QToF2, Waters, Milford, MA. Peptides were sequenced (PepSeq, MassLynx v3.5 and proteins identified using MASCOT ®. Results Six different neuroglobin peptides were identified in various combinations in 3 of 9 female pain subjects, but none in male pain, or female or male control subjects. Conclusion This is the first description of neuroglobin in cerebrospinal fluid. The mechanism(s leading to its release in chronic pain states remain to be defined.

Status sulle conoscenze dei mammiferi molisani

Directory of Open Access Journals (Sweden)

Nicola Norante

2003-10-01

Full Text Available Il Molise risulta poco studiato dal punto di vista teriologico e, per colmare almeno in parte tale lacuna, il GMSO si è proposto di raccogliere dati bibliografici e inediti e promuovere qualche progetto. Si riportano sinteticamente dati relativi ad alcune specie. Sciurus vulgaris risulta comune in Prov. di Isernia, più localizzato in quella di Campobasso, presente nelle riserve MAB, nel Parco Naz. d?Abruzzo, Matese e Venafrano, nei pressi della zona ospedaliera di Campobasso ed anche al centro del capoluogo. Hystrix cristata, segnalata fino agli anni anni ?60 a Campomarino è stata trovata di recente (aculei in Alto Molise, sporadiche le segnalazioni nell?agro di S. Croce di Magliano-Colletorto (CB. Canis lupus ha recentemente allargato il suo areale raggiungendo anche siti in collina (per l?immissione dei Daini. Presente oltre che nel PNA, in tutta la Prov. di Isernia, Matese, montagna di Frosolone fino a Castropignano-Casalciprano. Preoccupante invece il randagismo canino verso il quale è auspicabile prendere dei provvedimenti. Ursus arctos è in aumento con massimi in Val di Mezzo, Val Fiorita, Val Pagana, M .te Marrone ed in tutto il gruppo delle Mainarde; fuori dal PNA è sempre più frequente: Matese, Carpinone e recentemente (27.04.03 una coppia in Valle del Sangro a S. Angelo in Pesco (IS. Nel 1995 una femmina è stata investita dal treno nei pressi di Carpinone (IS. Lutra lutra invece è diminuita rispetto al passato. La si incontrava fino agli anni ?70/80 fino alla foce dei fiumi Trigno, Biferno e T. Saccione. Attualmente è segnalata in prov. di Isernia (es. Venafrano, Matese, Montagna di Frosolone. Felis silvestris è presente soprattutto in Prov. di Isernia dove è segnalato in 38 Comuni. In quella di Campobasso appare più localizzato a nord e nel Matese. Riguardo Lynx lynx pare che qualche soggetto sia stato osservato nell?area limitrofa al P.N.A. dove è stata

[WILD MAMMALS OF THE GRAND DUCHY OF LITHUANIA IN THE WORKS OF JEAN-EMMANUEL GILIBERT].

Science.gov (United States)

Samojlik, Tomasz; Daszkiewicz, Piotr

2015-01-01

Among the many topics of lively scientific work that Jean Emmanuel Gilibert (1741-1814) conducted in Grodno and Vilnius, an important place is occupied by his observations of wild mammals. Royal patronage and care from Antoni Tyzenhauz, Treasurer of the Grand Duchy of Lithuania and the governor of Grodno, allowed Gilibert to keep and observe wild fauna captured by royal services in royal forests, including Białowieża Primeval Forest. Such was an origin of a female bison kept by Gilibert in Grodno. Its description, published in Indagatores naturae in Lithuania (Vilnius 1781) for decades became the primary source of information about the behaviour, food preferences and the anatomy of European bison. European science has just begun to take interest in European bison, therefore Gilibert's account entered scientific circulation by way of French natural history encyclopaedias (mainly Georges Buffon's Histoire naturelle) and works by Georges Cuvier or Étienne Geoffroy Saint-Hilaire. Apart from the description of European bison, Gilibert left an entire series of observations of wild mammals inhabiting the forests of the Grand Duchy of Lithuania. His accounts of moose were important in building a knowledge base for this species. In the first half of the 18th century, moose was known mainly from fantastic descriptions in Renaissance works and from prescriptions devoted to using moose hoof as the epilepsy treatment. Gilibert's observations helped to overthrow such superstitions. Similarly, Gilibert's first-hand information verified the widespread legends concerning brown bear (e.g. the belief that white bears, belonging to other species than polar bears, occur in Lithuania) . List of species kept and thoroughly watched by the scholar is much longer and includes lynx, wolf (and hybrids of wolves and dogs), beaver, badger, fox, hedgehog, and even white mouse. Also his comments on the species of mammals then absent in Lithuania but known either from farming or from the fur

Secreted Isoform of Human Lynx1 (SLURP-2): Spatial Structure and Pharmacology of Interactions with Different Types of Acetylcholine Receptors

Czech Academy of Sciences Publication Activity Database

Lyukmanova, E. N.; Shulepko, M. A.; Shenkarev, Z. O.; Bychkov, M. L.; Paramonov, A. S.; Chugunov, A. O.; Kulbatskii, D. S.; Arvaniti, M.; Dolejší, Eva; Schaer, T.; Arseniev, A. S.; Efremov, R. G.; Thomsen, M. S.; Doležal, Vladimír; Bertrand, D.; Dolgikh, D. A.; Kirpichnikov, M. P.

2016-01-01

Roč. 6, Aug 3 (2016), s. 30698 ISSN 2045-2322 R&D Projects: GA ČR(CZ) GA14-05696S Institutional support: RVO:67985823 Keywords : ion channel * signalling * molecular modelling * protein–protein interaction networks * solution-state NMR Subject RIV: ED - Physiology Impact factor: 4.259, year: 2016

Characterization of the multiple components of Acanthopanax Senticosus stem by ultra high performance liquid chromatography with quadrupole time-of-flight tandem mass spectrometry.

Science.gov (United States)

Sun, Hui; Liu, Jianhua; Zhang, Aihua; Zhang, Ying; Meng, Xiangcai; Han, Ying; Zhang, Yingzhi; Wang, Xijun

2016-02-01

Acanthopanax Senticosus Harms. has been used widely in traditional Chinese medicine for the treatment of chronic bronchitis, neurasthenia, hypertension and ischemic heart disease. However, the in vivo constituents of the stem of Acanthopanax Senticosus remain unknown. In this paper, ultra high performance liquid chromatography with electrospray ionization quadrupole time-of-flight mass spectrometry and the MarkerLynx(TM) software combined with multiple data processing approach were used to study the constituents in vitro and in vivo. The aqueous extract from the Acanthopanax Senticosus stem and the compositions in rat serum after intragastric administration were completely analyzed. Consequently, 115 compounds in the aqueous extract from Acanthopanax Senticosus stem and 41 compounds absorbed into blood were characterized. Of the 115 compounds in vitro, 54 were reported for first time, including sinapyl alcohol, sinapyl alcohol diglucoside, and 1-O-sinapoyl-β-D-glucose. In the 41 compounds in vivo, 7 were prototype components and 34 were metabolites which were from 21 components of aqueous extract from Acanthopanax Senticosus stem, and the metabolic pathways of the metabolites were elucidated for first time. The results narrowed the range of screening the active components and provided a basis for the study of action mechanism and pharmacology. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Roadside Multiple Objects Extraction from Mobile Laser Scanning Point Cloud Based on DBN

Directory of Open Access Journals (Sweden)

LUO Haifeng

2018-02-01

Full Text Available This paper proposed an novel algorithm for exploring deep belief network (DBN architectures to extract and recognize roadside facilities (trees,cars and traffic poles from mobile laser scanning (MLS point cloud.The proposed methods firstly partitioned the raw MLS point cloud into blocks and then removed the ground and building points.In order to partition the off-ground objects into individual objects,off-ground points were organized into an Octree structure and clustered into candidate objects based on connected component.To improve segmentation performance on clusters containing overlapped objects,a refining processing using a voxel-based normalized cut was then implemented.In addition,multi-view features descriptor was generated for each independent roadside facilities based on binary images.Finally,a deep belief network (DBN was trained to extract trees,cars and traffic pole objects.Experiments are undertaken to evaluate the validities of the proposed method with two datasets acquired by Lynx Mobile Mapper System.The precision of trees,cars and traffic poles objects extraction results respectively was 97.31%,97.79% and 92.78%.The recall was 98.30%,98.75% and 96.77% respectively.The quality is 95.70%,93.81% and 90.00%.And the F1 measure was 97.80%,96.81% and 94.73%.

PARTICULARITIES AND THREATS ON THE BIODIVERSITY FROM CROATIA

Directory of Open Access Journals (Sweden)

Andreea BĂLTĂREŢU

2010-12-01

Full Text Available Because it has a specific geographic position and it’s situated at the crossroads of several bio-geographical regions and as a result of its ecological characteristics, the climate and geo-morphological conditions, Croatia is one of the wealthiest countries from Europe concerning the biodiversity. The great variety of the territory, maritime and underground habitats has determined the existence of numerous species and subspecies, including a significant number of endemic species. Although the climate of Croatia has a great value, many of its components are threatened. The most important threats of wild species are losing the habitats and the degradation. Because of its shape and its position in Europe, Croatia has very rich landscape diversity. Croatia contains significant populations of many species that are threatened at the European level. These are connected to preserved large areas of their habitats. Vast mountain beech and fir forests are rich in bear, wolf and lynx populations. Large wetland complexes with alluvial forests are important breeding, the migration and wintering sites for European water birds and for wetland birds nesting in forests. The wealth of marine biodiversity, in combination with the immense diversity of islands and cliffs with endemic life forms, gives the Croatian coastal area international significance.

Rodent foraging is affected by indirect, but not by direct, cues of predation risk.

Energy Technology Data Exchange (ETDEWEB)

Orrock, John, L.; Danielson, Brent, J.; Brinkerhoff, R., Jory

2004-01-01

Behavioral Ecology Vol. 15 No. 3: 433 - 437 We used foraging trays to determine whether old field mice, Peromyscus polionotus , altered foraging in response to direct cues of predation risk (urine of native and nonnative predators) and indirect cues of predation risk (foraging microhabitat, precipitation, and moon illumination). The proportion of seeds remaining in each tray (a measure of the giving-up density [GUD]) was used to measure risk perceived by mice. Mice did not alter their GUD when presented with cues of native predators (bobcats, Lynx r ufus , and red foxes, Vulpes vulpes), recently introduced predators (coyotes, Canis latrans ), nonnative predators (ocelots, Leopardus pardalis ), a native herbivore (white-tailed deer, Odocoileus virginianus), or a water control. Rather, GUD was related to microhabitat: rodents removed more seeds from foraging trays sheltered beneath vegetative cover compared with exposed trays outside of cover. Rodents also removed more seeds during nights with precipitation and when moon illumination was low. Our results suggest that P. polionotus used indirect cues rather than direct cues to assess risk of vertebrate predation. Indirect cues may be more reliable than are direct scent cues for estimating risk from multiple vertebrate predators that present the most risk in open environments.

Scat removal: A source of bias in feces-related studies

Science.gov (United States)

Livingston, T.R.; Gipson, P.S.; Ballard, W.B.; Sanchez, D.M.; Krausman, P.R.

2005-01-01

Consumption of feces (coprophagy) may alter findings of dietary studies and population estimates based on fecal analyses, but its magnitude is poorly understood. We investigated seasonal incidence of scat removal on Fort Riley, Kansas, from January through December 2000. We placed feces from captive bobcats (Lynx rufus), captive coyotes (Canis latrans), and free-ranging coyotes randomly on tracking stations in forest and prairie landscapes to determine rates of scat removal by local wildlife. Rates of removal of feces from captive bobcats, captive coyotes, and free-ranging coyotes varied from 7% during spring to 50% during summer. We identified opossums (Didelphis virginiana) as the most common species present at stations where scat removal occurred. Feces may be an important seasonal source of food for opossums and may provide seasonal dietary supplements for other species. Other factors responsible for disturbance of feces included a woodrat (Neotoma floridana) caching coyote feces, removal of captive coyote feces by free-ranging coyotes accompanied by deposition of fresh feces, a bobcat burying a captive bobcat sample and depositing fresh feces, and rain storms. Dietary studies based on fecal analyses could be biased by scat removal, assuming that contents in feces are representative of the proportion of foods consumed.

Mammalian fauna of the Temessos National Park, Turkey

Directory of Open Access Journals (Sweden)

Anna De Marinis

2009-12-01

Full Text Available The National Park of Termessos, Southern Turkey, is one of the Turkey’s biggest national park not only with its archeological richness but also with its great natural wild life. We provided a checklist of the mammalian fauna of the park on the base of direct observations, interviews and a comparative analysis of the available literature. Sixteen species have been reported in the park. Hedgehogs, hares, porcupines and Persian squirrels and, among flying mammals, Egyptian rousette and Mouse-eared bat have been recorded. Carnivores are represented by Golden jackal, Wolf, Red fox, Stone marten, Badger, Otter and Wild cat. Very recently (2005 the presence of the Caracal in the park has been confirmed, whereas no signs of the presence of the Lynx were detected. The last Anatolian leopards seems to have definitively disappeared from the region. The occurrence in the area of striped hyaenas and brown bears is documented up to a few decades ago. The Park is regarded as the only geographical range in the whole world where the European or Common fallow deer has persisted as a native form. Other ungulates too, such as Wild goat and Wild boar are dispersed within the boundary of the park. Management implications are discussed.

Advancing the technology of monolithic CMOS detectors for use as x-ray imaging spectrometers

Science.gov (United States)

Kenter, Almus; Kraft, Ralph; Gauron, Thomas; Amato, Stephen

2017-08-01

The Smithsonian Astrophysical Observatory (SAO) in collaboration with SRI/Sarnoff has been engaged in a multi year effort to advance the technology of monolithic back-thinned CMOS detectors for use as X-ray imaging spectrometers. The long term goal of this campaign is to produce X-ray Active Pixel Sensor (APS) detectors with Fano limited performance over the 0.1-10keV band while incorporating the many benefits of CMOS technology. These benefits include: low power consumption, radiation "hardness", high levels of integration, and very high read rates. Such devices would be ideal for candidate post 2020 decadal missions such as LYNX and for smaller more immediate applications such as CubeX. Devices from a recent fabrication have been back-thinned, packaged and tested for soft X-ray response. These devices have 16μm pitch, 6 Transistor Pinned Photo Diode (6TPPD) pixels with ˜135μV/electron sensitivity and a highly parallel signal chain. These new detectors are fabricated on 10μm epitaxial silicon and have a 1k by 1k format. We present details of our camera design and device performance with particular emphasis on those aspects of interest to single photon counting X-ray astronomy. These features include read noise, X-ray spectral response and quantum efficiency.

Survey of wildlife, including aquatic mammals, associated with riparian habitat on the Syncrude Canada Ltd. Aurora Mine environmental impact assessment local study area

Energy Technology Data Exchange (ETDEWEB)

Surrendi, D.C.

1996-12-31

A general overview of the wildlife associated with riparian habitats at Syncrude`s proposed Aurora Mine, located 70 km northeast of Fort McMurray, Alberta on the east side of the Athabasca River, was presented. The area is underlain by bitumen and is being considered for bitumen extraction and production of synthetic crude oil. Two surveys were conducted with the help of experienced trappers from the community at Fort McKay. One was an aerial survey on November 3, 1995, the other a ground survey on November 29-30, 1995. The two surveys yielded 248 observed tracks on four 500 metre transects. The study area was comprised of boreal forest with natural drainage via Stanley Creek into the Muskeg River and via Fort Creek into the Athabasca River. Beavers, fox, weasel, mink, rabbit, wolf, moose, deer, ptarmigan, sharp-tailed grouse and ruffed grouse, lynx, coyote, river otter and mice were associated with riparian habitat on the study area. There was no sign of muskrat in the study area. It was concluded that in order to develop an understanding of reclamation alternatives for mined areas in the region, future detailed examination of the site should be approached through the integration of traditional ecological knowledge and conventional scientific methodology. 26 refs., 12 tabs., 2 figs.

Survey of wildlife, including aquatic mammals, associated with riparian habitat on the Syncrude Canada Ltd. Aurora Mine environmental impact assessment local study area

International Nuclear Information System (INIS)

Surrendi, D.C.

1996-01-01

A general overview of the wildlife associated with riparian habitats at Syncrude's proposed Aurora Mine, located 70 km northeast of Fort McMurray, Alberta on the east side of the Athabasca River, was presented. The area is underlain by bitumen and is being considered for bitumen extraction and production of synthetic crude oil. Two surveys were conducted with the help of experienced trappers from the community at Fort McKay. One was an aerial survey on November 3, 1995, the other a ground survey on November 29-30, 1995. The two surveys yielded 248 observed tracks on four 500 metre transects. The study area was comprised of boreal forest with natural drainage via Stanley Creek into the Muskeg River and via Fort Creek into the Athabasca River. Beavers, fox, weasel, mink, rabbit, wolf, moose, deer, ptarmigan, sharp-tailed grouse and ruffed grouse, lynx, coyote, river otter and mice were associated with riparian habitat on the study area. There was no sign of muskrat in the study area. It was concluded that in order to develop an understanding of reclamation alternatives for mined areas in the region, future detailed examination of the site should be approached through the integration of traditional ecological knowledge and conventional scientific methodology. 26 refs., 12 tabs., 2 figs

Seroprevalence of Toxoplasma gondii infection in captive mammals in three zoos in Mexico City, Mexico.

Science.gov (United States)

Alvarado-Esquivel, Cosme; Gayosso-Dominguez, Edgar Arturo; Villena, Isabelle; Dubey, J P

2013-09-01

Antibodies to Toxoplasma gondii were determined in 167 mammals in three zoos in Mexico City, Mexico, using the modified agglutination test (MAT). Overall, antibodies to T. gondii were found in 89 (53.3%) of the 167 animals tested. Antibodies were found in 35 of 43 wild Felidae: 2 of 2 bobcats (Lynx rufus); 4 of 4 cougars (Puma concolor); 10 of 13 jaguars (Panthera onca); 5 of 5 leopards (Panthera pardus); 7 of 7 lions (Panthera leo); 2 of 3 tigers (Panthera tigris); 2 of 3 ocelots (Leopardus pardalis); 2 of 2 Sumatran tigers (Panthera tigris sumatrae); lof 2 Jaguarundi (Herpailurus jagouaroundi); but not in 0 of 2 oncillas (Leopardus tigrinus). Such high seroprevalence in wild felids is of public health significance because of the potential of oocyst shedding. Four of 6 New World primates (2 of 2 Geoffroy's spider monkeys [Ateles geoffroyi], 1 of 3 Patas monkeys [Erythrocebus patas], and 1 of 1 white-headed capuchin [Cebus capucinus]) had high MAT titers of 3,200, suggesting recently acquired infection; these animals are highly susceptible to clinical toxoplasmosis. However, none of these animals were ill. Seropositivity to T. gondii was found for the first time in a number of species.

Isolation of Bartonella henselae, Bartonella koehlerae subsp. koehlerae, Bartonella koehlerae subsp. bothieri and a new subspecies of B. koehlerae from free-ranging lions (Panthera leo) from South Africa, cheetahs (Acinonyx jubatus) from Namibia and captive cheetahs from California.

Science.gov (United States)

Molia, S; Kasten, R W; Stuckey, M J; Boulouis, H J; Allen, J; Borgo, G M; Koehler, J E; Chang, C C; Chomel, B B

2016-11-01

Bartonellae are blood- and vector-borne Gram-negative bacteria, recognized as emerging pathogens. Whole-blood samples were collected from 58 free-ranging lions (Panthera leo) in South Africa and 17 cheetahs (Acinonyx jubatus) from Namibia. Blood samples were also collected from 11 cheetahs (more than once for some of them) at the San Diego Wildlife Safari Park. Bacteria were isolated from the blood of three (5%) lions, one (6%) Namibian cheetah and eight (73%) cheetahs from California. The lion Bartonella isolates were identified as B. henselae (two isolates) and B. koehlerae subsp. koehlerae. The Namibian cheetah strain was close but distinct from isolates from North American wild felids and clustered between B. henselae and B. koehlerae. It should be considered as a new subspecies of B. koehlerae. All the Californian semi-captive cheetah isolates were different from B. henselae or B. koehlerae subsp. koehlerae and from the Namibian cheetah isolate. They were also distinct from the strains isolated from Californian mountain lions (Felis concolor) and clustered with strains of B. koehlerae subsp. bothieri isolated from free-ranging bobcats (Lynx rufus) in California. Therefore, it is likely that these captive cheetahs became infected by an indigenous strain for which bobcats are the natural reservoir.

Improved ultra-performance liquid chromatography with electrospray ionization quadrupole-time-of-flight high-definition mass spectrometry method for the rapid analysis of the chemical constituents of a typical medical formula: Liuwei Dihuang Wan.

Science.gov (United States)

Wang, Ping; Lv, Hai tao; Zhang, Ai hua; Sun, Hui; Yan, Guang li; Han, Ying; Wu, Xiu hong; Wang, Xi jun

2013-11-01

Liuwei Dihuang Wan (LDW), a classic Chinese medicinal formula, has been used to improve or restore declined functions related to aging and geriatric diseases, such as impaired mobility, vision, hearing, cognition, and memory. It has attracted increasing attention as one of the most popular and valuable herbal medicines. However, the systematic analysis of the chemical constituents of LDW is difficult and thus has not been well established. In this paper, a rapid, sensitive, and reliable ultra-performance LC with ESI quadrupole TOF high-definition MS method with automated MetaboLynx analysis in positive and negative ion mode was established to characterize the chemical constituents of LDW. The analysis was performed on a Waters UPLC™ HSS T3 using a gradient elution system. MS/MS fragmentation behavior was proposed for aiding the structural identification of the components. Under the optimized conditions, a total of 50 peaks were tentatively characterized by comparing the retention time and MS data. It is concluded that a rapid and robust platform based on ultra-performance LC with ESI quadrupole TOF high-definition MS has been successfully developed for globally identifying multiple constituents of traditional Chinese medicine prescriptions. This is the first report on the systematic analysis of the chemical constituents of LDW. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Assessing transmissible spongiform encephalopathy species barriers with an in vitro prion protein conversion assay

Science.gov (United States)

Johnson, Christopher J.; Carlson, Christina M.; Morawski, Aaron R.; Manthei, Alyson; Cashman, Neil R.

2015-01-01

Studies to understanding interspecies transmission of transmissible spongiform encephalopathies (TSEs, prion diseases) are challenging in that they typically rely upon lengthy and costly in vivo animal challenge studies. A number of in vitro assays have been developed to aid in measuring prion species barriers, thereby reducing animal use and providing quicker results than animal bioassays. Here, we present the protocol for a rapid in vitroprion conversion assay called the conversion efficiency ratio (CER) assay. In this assay cellular prion protein (PrPC) from an uninfected host brain is denatured at both pH 7.4 and 3.5 to produce two substrates. When the pH 7.4 substrate is incubated with TSE agent, the amount of PrPC that converts to a proteinase K (PK)-resistant state is modulated by the original host’s species barrier to the TSE agent. In contrast, PrPC in the pH 3.5 substrate is misfolded by any TSE agent. By comparing the amount of PK-resistant prion protein in the two substrates, an assessment of the host’s species barrier can be made. We show that the CER assay correctly predicts known prion species barriers of laboratory mice and, as an example, show some preliminary results suggesting that bobcats (Lynx rufus) may be susceptible to white-tailed deer (Odocoileus virginianus) chronic wasting disease agent.

Predicting carnivore occurrence with noninvasive surveys and occupancy modeling

Science.gov (United States)

Long, Robert A.; Donovan, Therese M.; MacKay, Paula; Zielinski, William J.; Buzas, Jeffrey S.

2011-01-01

Terrestrial carnivores typically have large home ranges and exist at low population densities, thus presenting challenges to wildlife researchers. We employed multiple, noninvasive survey methods—scat detection dogs, remote cameras, and hair snares—to collect detection–nondetection data for elusive American black bears (Ursus americanus), fishers (Martes pennanti), and bobcats (Lynx rufus) throughout the rugged Vermont landscape. We analyzed these data using occupancy modeling that explicitly incorporated detectability as well as habitat and landscape variables. For black bears, percentage of forested land within 5 km of survey sites was an important positive predictor of occupancy, and percentage of human developed land within 5 km was a negative predictor. Although the relationship was less clear for bobcats, occupancy appeared positively related to the percentage of both mixed forest and forested wetland habitat within 1 km of survey sites. The relationship between specific covariates and fisher occupancy was unclear, with no specific habitat or landscape variables directly related to occupancy. For all species, we used model averaging to predict occurrence across the study area. Receiver operating characteristic (ROC) analyses of our black bear and fisher models suggested that occupancy modeling efforts with data from noninvasive surveys could be useful for carnivore conservation and management, as they provide insights into habitat use at the regional and landscape scale without requiring capture or direct observation of study species.

Effects of urbanization on carnivore species distribution and richness

Science.gov (United States)

Ordenana, Miguel A.; Crooks, Kevin R.; Boydston, Erin E.; Fisher, Robert N.; Lyren, Lisa M.; Siudyla, Shalene; Haas, Christopher D.; Harris, Sierra; Hathaway, Stacie A.; Turschak, Greta M.; Miles, A. Keith; Van Vuren, Dirk H.

2010-01-01

Urban development can have multiple effects on mammalian carnivore communities. We conducted a meta-analysis of 7,929 photographs from 217 localities in 11 camera-trap studies across coastal southern California to describe habitat use and determine the effects of urban proximity (distance to urban edge) and intensity (percentage of area urbanized) on carnivore occurrence and species richness in natural habitats close to the urban boundary. Coyotes (Canis latrans) and bobcats (Lynx rufus) were distributed widely across the region. Domestic dogs (Canis lupus familiaris), striped skunks (Mephitis mephitis), raccoons (Procyon lotor), gray foxes (Urocyon cinereoargenteus), mountain lions (Puma concolor), and Virginia opossums (Didelphis virginiana) were detected less frequently, and long-tailed weasels (Mustela frenata), American badgers (Taxidea taxus), western spotted skunks (Spilogale gracilis), and domestic cats (Felis catus) were detected rarely. Habitat use generally reflected availability for most species. Coyote and raccoon occurrence increased with both proximity to and intensity of urbanization, whereas bobcat, gray fox, and mountain lion occurrence decreased with urban proximity and intensity. Domestic dogs and Virginia opossums exhibited positive and weak negative relationships, respectively, with urban intensity but were unaffected by urban proximity. Striped skunk occurrence increased with urban proximity but decreased with urban intensity. Native species richness was negatively associated with urban intensity but not urban proximity, probably because of the stronger negative response of individual species to urban intensity.

Metabolism of Genipin in Rat and Identification of Metabolites by Using Ultraperformance Liquid Chromatography/Quadrupole Time-of-Flight Tandem Mass Spectrometry

Directory of Open Access Journals (Sweden)

Yue Ding

2013-01-01

Full Text Available The in vivo and in vitro metabolism of genipin was systematically investigated in the present study. Urine, plasma, feces, and bile were collected from rats after oral administration of genipin at a dose of 50 mg/kg body weight. A rapid and sensitive method using ultraperformance liquid chromatography coupled with electrospray ionization quadrupole time-of-flight tandem mass spectrometry (UPLC-Q/TOF MS was developed for analysis of metabolic profile of genipin in rat biological samples (urine, plasma, feces, and bile. A total of ten metabolites were detected and identified by comparing their fragmentation patterns with that of genipin using MetaboLynx software tools. On the basis of the chromatographic peak area, the sulfated and glucuronidated conjugates of genipin were identified as major metabolites. And the existence of major metabolites G1 and G2 was confirmed by the in vitro enzymatic study further. Then, metabolite G1 was isolated from rat bile by semipreparative HPLC. Its structure was unambiguously identified as genipin-1-o-glucuronic acid by comparison of its UV, IR, ESI-MS, 1H-NMR, and 13C-NMR spectra with conference. In general, genipin was a very active compound that would transform immediately, and the parent form of genipin could not be observed in rats biological samples. The biotransformation pathways of genipin involved demethylated, ring-opened, cysteine-conjugated, hydroformylated, glucuronidated, and sulfated transformations.

The Conservation Measures of NATURA 2000 "Someşul Rece" Site Management Plan

Directory of Open Access Journals (Sweden)

Marian Proorocu

2016-11-01

Full Text Available Natura 2000 is a European network of protected natural areas including a significant number of natural habitats and wild species for the interest of comunnity. Natura 2000 ROSCI 0233 "Someşul Rece"  Site is situated in the south-western county of Cluj, on the administrative territory of Măguri-Răcătău and Ierii Valley. It has an area of 8529 ha and is a framed area of the Apuseni Mountains Alpine bioregions. The site preserves the following natural habitats: Rough mountain beech forests Asperulo-Fagetum, beech forests of Luzulo-Fagetum, forests acidophilous Picea Abies mountain region and protect important species and active fish fauna, flora and fauna of the Apuseni Mountains. It is also home for several species (mammals, amphibians, fish and beetles like: lynx, wolf or otter. The conservation measures of Natura 2000 Somesul Rece Site, elaborated in order to protect the habitats and the species are part of the management plan. These measures were developed in close connection with the conservation status of habitats and species, but also taking into account the needs of local communities. These measures include: maintaining habitats in favorable conservation status; maintain the current habitat areas; preventing and combating poaching and overfishing;ensuring peace in areas of rock (for large mammals.

Automated Techniques for the Qualitative Analysis of Ecological Models: Continuous Models

Directory of Open Access Journals (Sweden)

Lynn van Coller

1997-06-01

Full Text Available The mathematics required for a detailed analysis of the behavior of a model can be formidable. In this paper, I demonstrate how various computer packages can aid qualitative analyses by implementing techniques from dynamical systems theory. Because computer software is used to obtain the results, the techniques can be used by nonmathematicians as well as mathematicians. In-depth analyses of complicated models that were previously very difficult to study can now be done. Because the paper is intended as an introduction to applying the techniques to ecological models, I have included an appendix describing some of the ideas and terminology. A second appendix shows how the techniques can be applied to a fairly simple predator-prey model and establishes the reliability of the computer software. The main body of the paper discusses a ratio-dependent model. The new techniques highlight some limitations of isocline analyses in this three-dimensional setting and show that the model is structurally unstable. Another appendix describes a larger model of a sheep-pasture-hyrax-lynx system. Dynamical systems techniques are compared with a traditional sensitivity analysis and are found to give more information. As a result, an incomplete relationship in the model is highlighted. I also discuss the resilience of these models to both parameter and population perturbations.

SPring-8 beamline control system.

Science.gov (United States)

Ohata, T; Konishi, H; Kimura, H; Furukawa, Y; Tamasaku, K; Nakatani, T; Tanabe, T; Matsumoto, N; Ishii, M; Ishikawa, T

1998-05-01

The SPring-8 beamline control system is now taking part in the control of the insertion device (ID), front end, beam transportation channel and all interlock systems of the beamline: it will supply a highly standardized environment of apparatus control for collaborative researchers. In particular, ID operation is very important in a third-generation synchrotron light source facility. It is also very important to consider the security system because the ID is part of the storage ring and is therefore governed by the synchrotron ring control system. The progress of computer networking systems and the technology of security control require the development of a highly flexible control system. An interlock system that is independent of the control system has increased the reliability. For the beamline control system the so-called standard model concept has been adopted. VME-bus (VME) is used as the front-end control system and a UNIX workstation as the operator console. CPU boards of the VME-bus are RISC processor-based board computers operated by a LynxOS-based HP-RT real-time operating system. The workstation and the VME are linked to each other by a network, and form the distributed system. The HP 9000/700 series with HP-UX and the HP 9000/743rt series with HP-RT are used. All the controllable apparatus may be operated from any workstation.

Epizootic and zoonotic helminths of the bobcat (Lynx rufus in Illinois and a comparison of its helminth component communities across the American Midwest

Directory of Open Access Journals (Sweden)

Hiestand Shelby J.

2014-01-01

Full Text Available A total of 6257 helminths of 19 taxa were recovered from the digestive tract and lungs of 67 bobcats in Illinois. Infections caused by Alaria mustelae, Diphyllobothrium latum, and Macracanthorhynchus ingens are reported for the first time in bobcats. From all the taxa recovered, only three species occurred in high prevalence and caused intense infections: Taenia rileyi, Alaria marcianae, and Toxocara cati, with prevalence and mean intensity of 70% and 6; 42% and 193, and 25% and 14 individuals, respectively. Prevalence lower than 15% of 14 helminth species suggests bobcats are not continuously exposed to infective stages of a single parasite, and may be exposed to a large variety of generalists during their lifespan. No significant difference in parasite species according to host sex or age was detected, except for Diphyllobothrium spp., which were found more frequently in females and in trapped bobcats, and the hookworm, Ancylostoma caninum, which infected juveniles more frequently. Average species richness per infracommunity was 2.4 (±1.2, and the parasite component community showed low qualitative similarity with neighbor communities. The taxa A. caninum, Alaria spp., Diphyllobothrium spp., Paragonimus kellicotti, and T. cati are etiological agents of epizootic and zoonotic diseases.

The carnivore remains from the Sima de los Huesos Middle Pleistocene site (Sierra de Atapuerca, Spain).

Science.gov (United States)

García, N; Arsuaga, J L; Torres, T

1997-01-01

Remains of carnivores from the Sima de los Huesos site representing at least 158 adult individuals of a primitive (i.e., not very speleoid) form of Ursus deningeri Von Reichenau 1906, have been recovered through the 1995 field season. These new finds extend our knowledge of this group in the Sierra de Atapuerca Middle Pleistocene. Material previously classified as Cuoninae indet, is now assigned to Canis lupus and a third metatarsal assigned in 1987 to Panthera of gombaszoegensis, is in our opinion only attributable to Panthera sp. The family Mustelidae is added to the faunal list and includes Martes sp. and a smaller species. The presence of Panthera leo cf. fossilis, Lynx pardina spelaea and Felis silvestris, is confirmed. The presence of a not very speloid Ursus deningeri, together with the rest of the carnivore assemblage, points to a not very late Middle Pleistocene age, i.e., oxygen isotope stage 7 or older. Relative frequencies of skeletal elements for the bear and fox samples are without major biases. The age structure of the bear sample, based on dental wear stages, does not follow the typical hibernation mortality profile and resembles a catastrophic profile. The site was not a natal or refuge den. The hypothesis that the site was a natural trap is the most plausible. If the Sima de los Huesos functioned as a natural trap (without an egress out), the human accumulation cannot be attributed to carnivore: activities and must be explained differently.

Regulating Critical Period Plasticity: Insight from the Visual System to Fear Circuitry for Therapeutic Interventions

Directory of Open Access Journals (Sweden)

Elisa M. Nabel

2013-11-01

Full Text Available Early temporary windows of heightened brain plasticity called critical periods developmentally sculpt neural circuits and contribute to adult behavior. Regulatory mechanisms of visual cortex development –the preeminent model of experience-dependent critical period plasticity- actively limit adult plasticity and have proved fruitful therapeutic targets to reopen plasticity and rewire faulty visual system connections later in life. Interestingly, these molecular mechanisms have been implicated in the regulation of plasticity in other functions beyond vision. Applying mechanistic understandings of critical period plasticity in the visual cortex to fear circuitry may provide a conceptual framework for developing novel therapeutic tools to mitigate aberrant fear responses in post traumatic stress disorder. In this review, we turn to the model of experience-dependent visual plasticity to provide novel insights for the mechanisms regulating plasticity in the fear system. Fear circuitry, particularly fear memory erasure, also undergoes age-related changes in experience-dependent plasticity. We consider the contributions of molecular brakes that halt visual critical period plasticity to circuitry underlying fear memory erasure. A major molecular brake in the visual cortex, perineuronal net formation, recently has been identified in the development of fear systems that are resilient to fear memory erasure. The roles of other molecular brakes, myelin-related Nogo receptor signaling and Lynx family proteins– endogenous inhibitors for nicotinic acetylcholine receptor, are explored in the context of fear memory plasticity. Such fear plasticity regulators, including epigenetic effects, provide promising targets for therapeutic interventions.

Linux OS integrated modular avionics application development framework with apex API of ARINC653 specification

Directory of Open Access Journals (Sweden)

Anna V. Korneenkova

2017-01-01

Full Text Available The framework is made to provide tools to develop the integrated modular avionics (IMA applications, which could be launched on the target platform LynxOs-178 without modifying their source code. The framework usage helps students to form skills for developing modern modules of the avionics. In addition, students obtain deeper knowledge for the development of competencies in the field of technical creativity by using of the framework.The article describes the architecture and implementation of the Linux OS framework for ARINC653 compliant OS application development.The proposed approach reduces ARINC-653 application development costs and gives a unified tool to implement OS vendor independent code that meets specification. To achieve import substitution free and open-source Linux OS is used as an environment for developing IMA applications.The proposed framework is applicable for using as the tool to develop IMA applications and as the tool for development of the following competencies: the ability to master techniques of using software to solve practical problems, the ability to develop components of hardware and software systems and databases, using modern tools and programming techniques, the ability to match hardware and software tools in the information and automated systems, the readiness to apply the fundamentals of informatics and programming to designing, constructing and testing of software products, the readiness to apply basic methods and tools of software development, knowledge of various technologies of software development.

Analysis of membrane proteome by data-dependent LC-MS/MS combined with data-independent LC-MSE technique

Directory of Open Access Journals (Sweden)

Joseph Kwon

2010-03-01

Full Text Available Proteomics work resembles the search for a needle in a haystack. The identification of protein biomarker requires the removal of the false protein data from the whole protein mixture. For high quality proteomic data, even a strict filtration step using the false discovery rate (FDR is insufficient for obtaining perfect protein information from the biological samples. In this study, the cyanobacterial whole membrane fraction was applied to the data-dependent analysis (DDA mode of LC-MS/MS, which was used along with the data-independent LC-MSE technique in order to evaluate the membrane proteomic data. Furthermore, the identified MSE-information (MSE-i data based on the peptide mass and the retention time were validated by the other database search, i.e., the probability-based MASCOT and de novo search engine PEAKS. In this present study, 208 cyanobacterial proteins with FDR of 5% were identified using the data-independent nano-UPLC/MSE acquisition with the Protein Lynx Global Server (PLGS, and 56 of these proteins were the predicted membrane proteins. When a total of 208 MSE-i proteomic data were applied to the DDA mode of LC-MS/MS, the number of identified membrane proteins was 26 and 33 from MASCOT and PEAKS with a FDR of 5%, respectively. The number of totally overlapped membrane proteins was 25. Therefore, the data-independent LC-MSE identified more proteins with a high confidence.

Rapidly deteriorating course in Dutch hereditary spastic paraplegia type 11 patients

Science.gov (United States)

de Bot, Susanne T; Burggraaff, Rogier C; Herkert, Johanna C; Schelhaas, Helenius J; Post, Bart; Diekstra, Adinda; van Vliet, Reinout O; van der Knaap, Marjo S; Kamsteeg, Erik-Jan; Scheffer, Hans; van de Warrenburg, Bart P; Verschuuren-Bemelmans, Corien C; Kremer, Hubertus PH

2013-01-01

Although SPG11 is the most common complicated hereditary spastic paraplegia, our knowledge of the long-term prognosis and life expectancy is limited. We therefore studied the disease course of all patients with a proven SPG11 mutation as tested in our laboratory, the single Dutch laboratory providing SPG11 mutation analysis, between 1 January 2009 and 1 January 2011. We identified nine different SPG11 mutations, four of which are novel, in nine index patients. Eighteen SPG11 patients from these nine families were studied by means of a retrospective chart analysis and additional interview/examination. Ages at onset were between 4 months and 14 years; 39% started with learning difficulties rather than gait impairment. Brain magnetic resonance imaging showed a thin corpus callosum and typical periventricular white matter changes in the frontal horn region (known as the ‘ears-of the lynx'-sign) in all. Most patients became wheelchair bound after a disease duration of 1 to 2 decades. End-stage disease consisted of loss of spontaneous speech, severe dysphagia, spastic tetraplegia with peripheral nerve involvement and contractures. Several patients died of complications between ages 30 and 48 years, 3–4 decades after onset of gait impairment. Other relevant features during the disease were urinary and fecal incontinence, obesity and psychosis. Our study of 18 Dutch SPG11-patients shows the potential serious long-term consequences of SPG11 including a possibly restricted life span. PMID:23443022

Use of somatic cell banks in the conservation of wild felids.

Science.gov (United States)

Praxedes, Érika A; Borges, Alana A; Santos, Maria V O; Pereira, Alexsandra F

2018-05-03

The conservation of biological resources is an interesting strategy for the maintenance of biodiversity, especially for wild felids who are constantly threatened with extinction. For this purpose, cryopreservation techniques have been used for the long-term storage of gametes, embryos, gonadal tissues, and somatic cells and tissues. The establishment of these banks has been suggested as a practical approach to the preservation of species and, when done in tandem with assisted reproductive techniques, could provide the means for reproducing endangered species. Somatic cell banks have been shown remarkable for the conservation of genetic material of felids; by merely obtaining skin samples, it is possible to sample a large group of individuals without being limited by factors such as gender or age. Thus, techniques for somatic tissue recovery, cryopreservation, and in vitro culture of different wild felids have been developed, resulting in a viable method for the conservation of species. One of the most notable conservation programs for wild felines using somatic samples was the one carried out for the Iberian lynx, the most endangered feline in the world. Other wild felids have also been studied in other continents, such as the jaguar in South America. This review aims to present the technical progress achieved in the conservation of somatic cells and tissues in different wild felids, as well address the progress that has been achieved in a few species. © 2018 Wiley Periodicals, Inc.

The O VI Mystery: Mismatch between X-Ray and UV Column Densities

Science.gov (United States)

Mathur, S.; Nicastro, F.; Gupta, A.; Krongold, Y.; McLaughlin, B. M.; Brickhouse, N.; Pradhan, A.

2017-12-01

The UV spectra of Galactic and extragalactic sightlines often show O VI absorption lines at a range of redshifts, and from a variety of sources from the Galactic circumgalactic medium to active galactic nuclei (AGN) outflows. Inner shell O VI absorption is also observed in X-ray spectra (at λ =22.03 Å), but the column density inferred from the X-ray line was consistently larger than that from the UV line. Here we present a solution to this discrepancy for the z = 0 systems. The O II Kβ line {}4{S}0\\to {(}3D)3{p}4P at 562.40 eV (≡22.04 Å) is blended with the O VI Kα line in X-ray spectra. We estimate the strength of this O II line in two different ways, and show that in most cases the O II line accounts for the entire blended line. The small amount of O VI equivalent width present in some cases has column density entirely consistent with the UV value. This solution to the O VI discrepancy, however, does not apply to high column-density systems like AGN outflows. We discuss other possible causes to explain their UV/X-ray mismatch. The O VI and O II lines will be resolved by gratings on board the proposed mission Arcus and the concept mission Lynx, and would allow the detection of weak O VI lines not just at z = 0, but also at higher redshift.

The role of Chandra in ten years from now and for the next few decades of astrophysical research

Science.gov (United States)

D'Abrusco, Raffaele; Becker, Glenn E.; McCollough, Michael L.; Rots, Arnold H.; Thong, Sinh A.; Van Stone, David; Winkelman, Sherry

2018-06-01

For almost twenty years, Chandra has advanced our understanding of the X-ray Universe by allowing astronomers to peer into a previously unexplored region of the high-energy observational parameters space. Thanks to its longevity,the mission has accumulated a large, unique body of observations whose legacy value, already tangible at this point, will only increase with time, and whose long-lasting influence extends well beyond the energy interval probed by Chandra. The Chandra archive, through the extensive characterization of the links between observations and literature, has measured the impact of Chandra on the astrophysical literature at a high level of granularity, providing striking evidence of how deeply and widely Chandra has impacted the advancement of both high-energy astrophysics and astronomical research from a multi-wavelength perspective. In this talk, based on the missions that have been submitted for recommendation at the next decadal survey and the possible outcomes of the evaluation process, I will discuss how Chandra archival data can be used to anticipate the projected scientific success and long-lasting effects of a X-ray mission like Lynx or, differently, how they will become instrumental to maximize the scientific output of a new generation of facilities that will observe in different energies. I will argue that, in either scenario, the centrality of Chandra will extend well after the final demise of the mission, and its data will continue serving the community in many different ways for the foreseeable future.

Radioecological modelling of Polonium-210 and Caesium-137 in lichen-reindeer-man and top predators.

Science.gov (United States)

Persson, Bertil R R; Gjelsvik, Runhild; Holm, Elis

2018-06-01

This work deals with analysis and modelling of the radionuclides 210 Pb and 210 Po in the food-chain lichen-reindeer-man in addition to 210 Po and 137 Cs in top predators. By using the methods of Partial Least Square Regression (PLSR) the atmospheric deposition of 210 Pb and 210 Po is predicted at the sample locations. Dynamic modelling of the activity concentration with differential equations is fitted to the sample data. Reindeer lichen consumption, gastrointestinal absorption, organ distribution and elimination is derived from information in the literature. Dynamic modelling of transfer of 210 Pb and 210 Po to reindeer meat, liver and bone from lichen consumption, fitted well with data from Sweden and Finland from 1966 to 1971. The activity concentration of 210 Pb in the skeleton in man is modelled by using the results of studying the kinetics of lead in skeleton and blood in lead-workers after end of occupational exposure. The result of modelling 210 Pb and 210 Po activity in skeleton matched well with concentrations of 210 Pb and 210 Po in teeth from reindeer-breeders and autopsy bone samples in Finland. The results of 210 Po and 137 Cs in different tissues of wolf, wolverine and lynx previously published, are analysed with multivariate data processing methods such as Principal Component Analysis PCA, and modelled with the method of Projection to Latent Structures, PLS, or Partial Least Square Regression PLSR. Copyright © 2017 Elsevier Ltd. All rights reserved.

Comments on 'Origin of British and Irish mammals: disparate post-glacial colonisation and species introductions' by W.I. Montgomery, J. Provan, A.M. McCabe, and D.W. Yalden

Science.gov (United States)

Edwards, Ceiridwen J.

2014-12-01

Montgomery et al.'s recent paper in QSR (2014; vol. 98: 144-165) is a most welcome addition to the ongoing research into the origins of Irish mammals. In their Table 1, the authors have used "calibrated carbon dating, comparable stratigraphy and historical records … to establish the earliest known time of arrival of a species in […] Ireland […] where relevant, the latest record of a mammal species [was] used to establish the earliest date after which it was extinct". It is assumed that the dates mentioned in this table are, therefore, calibrated. However, this is very unclear - when dates generated by the Irish Quaternary Fauna project (Woodman et al., 1997) are compared with those used by Montgomery et al. (2014), the earliest recorded dates of Mountain/Irish hare, Irish stoat, lynx and pine marten seem to be direct uncalibrated dates. It is also unclear whether the earliest and latest records of each species relate to all published data available at the time of writing. Even if only consulting those dates generated by Woodman et al. (1997), there are older earliest records for Arctic Fox, Collared lemming and grey wolf. In addition, Montgomery et al. (2014) do not seem to have included early radiocarbon dates for giant deer, reindeer and red deer (Woodman et al., 1997; Carden et al., 2012), or any of the recent radiocarbon dates for brown bear (Edwards et al., 2011), despite reference to these papers.

Evaluation of potential interactions between forest biomass production and Canadian wildlife. Final report

Energy Technology Data Exchange (ETDEWEB)

Coulombe, R.; Lemay, A.B.

1983-06-01

Forest management for biomass production can be undertaken in all provinces of Canada. Raw material can be extracted either from sawmills, logged areas, silvicultural treatments or short-rotation intensive culture. All forests are suitable habitats for wildlife. However, some species (e.g. woodland caribou, lynx, marten, owl) are extremely dependant on mature forests. Logging these forests generally contributes to reduction of habitats and thus populations. Management of second growth forests should take into consideration these species by extending rotations so part of the forests will serve the species. Removal of snags and downed logs to increase amount of raw material will contribute to reduced habitats of, for instance, tree-nesting birds. As these aspects have not been intensively studied within the Canadian forest regions, interactions can hardly be specified. Studies are recommended to analyse the overall problems and define measures to prevent detrimental effects. Other species (rare, threatened or endangered) will need specific attention and precaution while managing forests. Some are highly sensitive to noise and human disturbance (e.g. whooping crane, white pelican, peregrine falcon), others are very sensitive to harassment. Increased human presence within managed forests will necessitate more educational programs to prevent detrimental effects. Some species of reptiles, amphibians and fish are so poorly documented that only basic studies of the biology, ecology and distribution will permit to identify and evaluate interactions with these new forestry concepts. 289 refs., 19 figs., 36 tabs.

Carnivore distributions across chaparral habitats exposed to wildfire and rural housing in southern California

Science.gov (United States)

Schuette, P.A.; Diffendorfer, J.E.; Deutschman, D.H.; Tremor, S.; Spencer, W.

2014-01-01

Chaparral and coastal sage scrub habitats in southern California support biologically diverse plant and animal communities. However, native plant and animal species within these shrubland systems are increasingly exposed to human-caused wildfires and an expansion of the human–wildland interface. Few data exist to evaluate the effects of fire and anthropogenic pressures on plant and animal communities found in these environments. This is particularly true for carnivore communities. To address this knowledge gap, we collected detection–non-detection data with motion-sensor cameras and track plots to measure carnivore occupancy patterns following a large, human-caused wildfire (1134 km2) in eastern San Diego County, California, USA, in 2003. Our focal species set included coyote (Canis latrans), gray fox (Urocyon cinereoargenteus), bobcat (Lynx rufus) and striped skunk (Mephitis mephitis). We evaluated the influence on species occupancies of the burned environment (burn edge, burn interior and unburned areas), proximity of rural homes, distance to riparian area and elevation. Gray fox occupancies were the highest overall, followed by striped skunk, coyote and bobcat. The three species considered as habitat and foraging generalists (gray fox, coyote, striped skunk) were common in all conditions. Occupancy patterns were consistent through time for all species except coyote, whose occupancies increased through time. In addition, environmental and anthropogenic variables had weak effects on all four species, and these responses were species-specific. Our results helped to describe a carnivore community exposed to frequent fire and rural human residences, and provide baseline data to inform fire management policy and wildlife management strategies in similar fire-prone ecosystems.

Keanekaragaman dan Kerapatan Rumput Laut Alami Perairan Pulau Serangan Denpasar Bali

Directory of Open Access Journals (Sweden)

Ni Desak Putu Dita Herlinawati

2017-08-01

Full Text Available Serangan Island was a costal area located in the Serangan village, South Denpasar district, near with Sanur and Nusa Dua tourism area. Serangan beach has a biodiversity such as natural macroalgae. This study was conducted in January 2017 at the seaweed cultivation area with the aims of research were to know the variety and density of macroalgae. The method used was a 1x1 m quadrat transect. Sampling was carried out during low tide. Macroalgae found in the area, consist of 12 species namely Ulva lactuca, Chaetomorpha linum. Chaetomorpha aera, Padina australis, Sargassum fluitans, Turbinaria ornate, Gelidium sp., Hypnea cornuta, Hypnea spicifera, Gracilaria salicornia, Acanthophora spicifera, Halimeda opuntia. Those species were belonging to 3 divisi namely Chlorophyta, Phaeophyta, Rhodophyta. The highest density of macroalgae was Padina australis while the lowest density was Chaetomorpha linum. Type of dominated macroalgae was from a group of Phaeophyta (brown algae with highest dominance from the species of Padina australis. Water quality namely acidity (pH was in the range of 7.54 to 7.75, salinity of 31.33-32.00 ppt, the water temperature was 26.50-27.30? C, which all was categorized as the optimal parameters for the growth of macroalgae. Assosiation of biota found were 9 species namely fish of larva, Cypraea lynx (Molusca, Emerita sp., Halodule sp., Synapta maculate, Enhalus acoroides, Cymodocea serrulata, Hermit crab, Ophiuroidea sp. The conditions coastal waters substrate was varied from white sand stone type to stony type by coral pieces.

Trypanosoma cruzi strain TcIV infects raccoons from Illinois

Directory of Open Access Journals (Sweden)

Cailey Vandermark

Full Text Available BACKGROUND The northern limits of Trypanosoma cruzi across the territory of the United States remain unknown. The known vectors Triatoma sanguisuga and T. lecticularia find their northernmost limits in Illinois; yet, earlier screenings of those insects did not reveal the presence of the pathogen, which has not been reported in vectors or reservoir hosts in this state. OBJECTIVES Five species of medium-sized mammals were screened for the presence of T. cruzi. METHODS Genomic DNA was isolated from heart, spleen and skeletal muscle of bobcats (Lynx rufus, n = 60, raccoons (Procyon lotor, n = 37, nine-banded armadillos (Dasypus novemcinctus, n = 5, Virginia opossums (Didelphis virginiana, n = 3, and a red fox (Vulpes vulpes. Infections were detected targeting DNA from the kinetoplast DNA minicircle (kDNA and satellite DNA (satDNA. The discrete typing unit (DTU was determined by amplifying two gene regions: the Spliced Leader Intergenic Region (SL, via a multiplex polymerase chain reaction, and the 24Sα ribosomal DNA via a heminested reaction. Resulting sequences were used to calculate their genetic distance against reference DTUs. FINDINGS 18.9% of raccoons were positive for strain TcIV; the rest of mammals tested negative. MAIN CONCLUSIONS These results confirm for the first time the presence of T. cruzi in wildlife from Illinois, suggesting that a sylvatic life cycle is likely to occur in the region. The analyses of sequences of SL suggest that amplicons resulting from a commonly used multiplex reaction may yield non-homologous fragments.

Roads influence movement and home ranges of a fragmentation-sensitive carnivore, the bobcat, in an urban landscape

Science.gov (United States)

Poessel, Sharon A; Boydston, Erin E.; Lyren, Lisa M.; Fisher, Robert N.; Burdett, Christopher L.; Alonso, Robert S.; Crooks, Kevin R.

2014-01-01

Roads in urbanized areas can impact carnivore populations by constraining their movements and increasing mortality. Bobcats (Lynx rufus) are felids capable of living in urban environments, but are sensitive to habitat fragmentation and, thus, useful indicators of landscape connectivity; in particular, bobcat habitat selection, movement, and mortality may be affected by roads. We analyzed movement patterns of 52 bobcats in southern California in three study sites and investigated: (1) how bobcats responded to two types of roads within their home ranges; (2) how they placed their home ranges with respect to roads within the study area; and (3) whether male and female bobcats differed in their behavioral responses to roads. Within home ranges, primary and secondary roads did not influence movements, but bobcats more frequently crossed secondary roads when road densities were higher within their home ranges, thus increasing mortality risk. However, road densities within each study site were several times higher than road densities within home ranges, suggesting bobcats selected against roaded areas in home-range placement. Male home ranges bordering roads were smaller than home ranges for other males, but male home ranges containing roads were larger than those without roads. Male bobcats also were more likely to cross roads than females, potentially reflecting larger male home range sizes. Our results suggest roads have important impacts on urban bobcats, with stronger effects on males than females, and continued efforts to mitigate the effects of roads on carnivores and other fragmentation-sensitive species would help promote connectivity conservation in urban systems.

Automatic Road Sign Inventory Using Mobile Mapping Systems

Science.gov (United States)

Soilán, M.; Riveiro, B.; Martínez-Sánchez, J.; Arias, P.

2016-06-01

The periodic inspection of certain infrastructure features plays a key role for road network safety and preservation, and for developing optimal maintenance planning that minimize the life-cycle cost of the inspected features. Mobile Mapping Systems (MMS) use laser scanner technology in order to collect dense and precise three-dimensional point clouds that gather both geometric and radiometric information of the road network. Furthermore, time-stamped RGB imagery that is synchronized with the MMS trajectory is also available. In this paper a methodology for the automatic detection and classification of road signs from point cloud and imagery data provided by a LYNX Mobile Mapper System is presented. First, road signs are detected in the point cloud. Subsequently, the inventory is enriched with geometrical and contextual data such as orientation or distance to the trajectory. Finally, semantic content is given to the detected road signs. As point cloud resolution is insufficient, RGB imagery is used projecting the 3D points in the corresponding images and analysing the RGB data within the bounding box defined by the projected points. The methodology was tested in urban and road environments in Spain, obtaining global recall results greater than 95%, and F-score greater than 90%. In this way, inventory data is obtained in a fast, reliable manner, and it can be applied to improve the maintenance planning of the road network, or to feed a Spatial Information System (SIS), thus, road sign information can be available to be used in a Smart City context.

Novel Hepatozoon in vertebrates from the southern United States.

Science.gov (United States)

Allen, Kelly E; Yabsley, Michael J; Johnson, Eileen M; Reichard, Mason V; Panciera, Roger J; Ewing, Sidney A; Little, Susan E

2011-08-01

Novel Hepatozoon spp. sequences collected from previously unrecognized vertebrate hosts in North America were compared with documented Hepatozoon 18S rRNA sequences in an effort to examine phylogenetic relationships between the different Hepatozoon organisms found cycling in nature. An approximately 500-base pair fragment of 18S rDNA common to Hepatozoon spp. and some other apicomplexans was amplified and sequenced from the tissues or blood of 16 vertebrate host species from the southern United States, including 1 opossum (Didelphis virginiana), 2 bobcats (Lynx rufus), 1 domestic cat (Felis catus), 3 coyotes (Canis latrans), 1 gray fox (Urocyon cinereoargenteus), 4 raccoons (Procyon lotor), 1 pet boa constrictor (Boa constrictor imperator), 1 swamp rabbit (Sylvilagus aquaticus), 1 cottontail rabbit (Sylvilagus floridanus), 4 woodrats (Neotoma fuscipes and Neotoma micropus), 3 white-footed mice (Peromyscus leucopus), 8 cotton rats (Sigmodon hispidus), 1 cotton mouse (Peromyscus gossypinus), 1 eastern grey squirrel (Sciurus carolinensis), and 1 woodchuck (Marmota monax). Phylogenetic analyses and comparison with sequences in the existing database revealed distinct groups of Hepatozoon spp., with clusters formed by sequences obtained from scavengers and carnivores (opossum, raccoons, canids, and felids) and those obtained from rodents. Surprisingly, Hepatozoon spp. sequences from wild rabbits were most closely related to sequences obtained from carnivores (97.2% identical), and the sequence from the boa constrictor was most closely related to the rodent cluster (97.4% identical). These data are consistent with recent work identifying prey-predator transmission cycles in Hepatozoon spp. and suggest this pattern may be more common than previously recognized.

The importance of motivation, weapons, and foul odors in driving encounter competition in carnivores.

Science.gov (United States)

Allen, Maximilian L; Wilmers, Christopher C; Elbroch, L Mark; Golla, Julie M; Wittmer, Heiko U

2016-08-01

Encounter competition is interference competition in which animals directly contend for resources. Ecological theory predicts the trait that determines the resource holding potential (RHP), and hence the winner of encounter competition, is most often body size or mass. The difficulties of observing encounter competition in complex organisms in natural environments, however, has limited opportunities to test this theory across diverse species. We studied the outcome of encounter competition contests among mesocarnivores at deer carcasses in California to determine the most important variables for winning these contests. We found some support for current theory in that body mass is important in determining the winner of encounter competition, but we found that other factors including hunger and species-specific traits were also important. In particular, our top models were "strength and hunger" and "size and hunger," with models emphasizing the complexity of variables influencing outcomes of encounter competition. In addition, our wins above predicted (WAP) statistic suggests that an important aspect that determines the winner of encounter competition is species-specific advantages that increase their RHP, as bobcats (Lynx rufus) and spotted skunks (Spilogale gracilis) won more often than predicted based on mass. In complex organisms, such as mesocarnivores, species-specific adaptations, including strategic behaviors, aggressiveness, and weapons, contribute to competitive advantages and may allow certain species to take control or defend resources better than others. Our results help explain how interspecific competition shapes the occurrence patterns of species in ecological communities. © 2016 by the Ecological Society of America.

On a Possible Source of Some of the Images in the Annalistic Pokhvala to Prince Roman Mstislavich

Directory of Open Access Journals (Sweden)

Vadym I. Stavyskyi

2015-12-01

Full Text Available The subject of this article is the text known as the “Eulogy (Pokhvala to Prince Roman Mstislavich Galitsky,” which is from the opening section of the Galician-Volhynian Chronicle. The author of the article amplifies remarks made by Alexander Orlov about loanwords taken from translated works that appear in the text of the Pokhvala. The text of the exegesis of prophets by St. Hippolytus of Rome, which was widely known in Slavonic translation from the 12th century as the Slovo o Khriste i ob Antikhriste, produces additional material for comparison. St. Hippolytus’s text offers a possible interpretation of the concept “uma mudrostʹiu,” which the author of the Pokhvala offers as an explanation of the successful foreign policy of Prince Roman; in addition, this explanation helps to clarify the comparison of the prince with the eagle-lion, the lynx, and the crocodile. Certain characteristics of the text of the Pokhvala as revealed in the account of the exile of Khan Atrak by Prince Vladimir Monomakh and the subsequent mission carried out by Khan Syrchan, both unsupported in other sources, were, we believe, influenced by the text of the Slovo as well. It appears that literary images used throughout the Pokhvala were determined by apocalyptic symbols, following the approach that was typical of their interpretation by St. Hippolytus. This conclusion permits us to broaden our notions about the enumeration of works in translation used by the creator of the Galician-Volhynian Chronicle.

AUTOMATIC ROAD SIGN INVENTORY USING MOBILE MAPPING SYSTEMS

Directory of Open Access Journals (Sweden)

M. Soilán

2016-06-01

Full Text Available The periodic inspection of certain infrastructure features plays a key role for road network safety and preservation, and for developing optimal maintenance planning that minimize the life-cycle cost of the inspected features. Mobile Mapping Systems (MMS use laser scanner technology in order to collect dense and precise three-dimensional point clouds that gather both geometric and radiometric information of the road network. Furthermore, time-stamped RGB imagery that is synchronized with the MMS trajectory is also available. In this paper a methodology for the automatic detection and classification of road signs from point cloud and imagery data provided by a LYNX Mobile Mapper System is presented. First, road signs are detected in the point cloud. Subsequently, the inventory is enriched with geometrical and contextual data such as orientation or distance to the trajectory. Finally, semantic content is given to the detected road signs. As point cloud resolution is insufficient, RGB imagery is used projecting the 3D points in the corresponding images and analysing the RGB data within the bounding box defined by the projected points. The methodology was tested in urban and road environments in Spain, obtaining global recall results greater than 95%, and F-score greater than 90%. In this way, inventory data is obtained in a fast, reliable manner, and it can be applied to improve the maintenance planning of the road network, or to feed a Spatial Information System (SIS, thus, road sign information can be available to be used in a Smart City context.

Prey-mediated avoidance of an intraguild predator by its intraguild prey

Science.gov (United States)

Wilson, R.R.; Blankenship, T.L.; Hooten, M.B.; Shivik, J.A.

2010-01-01

Intraguild (IG) predation is an important factor influencing community structure, yet factors allowing coexistence of IG predator and IG prey are not well understood. The existence of spatial refuges for IG prey has recently been noted for their importance in allowing coexistence. However, reduction in basal prey availability might lead IG prey to leave spatial refuges for greater access to prey, leading to increased IG predation and fewer opportunities for coexistence. We determined how the availability of prey affected space-use patterns of bobcats (Lynx rufus, IG prey) in relation to coyote space-use patterns (Canis latrans, IG predators). We located animals from fall 2007 to spring 2009 and estimated bobcat home ranges and core areas seasonally. For each bobcat relocation, we determined intensity of coyote use, distance to water, small mammal biomass, and mean small mammal biomass of the home range during the season the location was collected. We built generalized linear mixed models and used Akaike Information Criteria to determine which factors best predicted bobcat space use. Coyote intensity was a primary determinant of bobcat core area location. In bobcat home ranges with abundant prey, core areas occurred where coyote use was low, but shifted to areas intensively used by coyotes when prey declined. High spatial variability in basal prey abundance allowed some bobcats to avoid coyotes while at the same time others were forced into more risky areas. Our results suggest that multiple behavioral strategies associated with spatial variation in basal prey abundance likely allow IG prey and IG predators to coexist. ?? 2010 Springer-Verlag.

Anthropogenic influences on macro-level mammal occupancy in the Appalachian Trail corridor.

Directory of Open Access Journals (Sweden)

Peter L Erb

Full Text Available Anthropogenic effects on wildlife are typically assessed at the local level, but it is often difficult to extrapolate to larger spatial extents. Macro-level occupancy studies are one way to assess impacts of multiple disturbance factors that might vary over different geographic extents. Here we assess anthropogenic effects on occupancy and distribution for several mammal species within the Appalachian Trail (AT, a forest corridor that extends across a broad section of the eastern United States. Utilizing camera traps and a large volunteer network of citizen scientists, we were able to sample 447 sites along a 1024 km section of the AT to assess the effects of available habitat, hunting, recreation, and roads on eight mammal species. Occupancy modeling revealed the importance of available forest to all species except opossums (Didelphis virginiana and coyotes (Canis latrans. Hunting on adjoining lands was the second strongest predictor of occupancy for three mammal species, negatively influencing black bears (Ursus americanus and bobcats (Lynx rufus, while positively influencing raccoons (Procyon lotor. Modeling also indicated an avoidance of high trail use areas by bears and proclivity towards high use areas by red fox (Vulpes vulpes. Roads had the lowest predictive power on species occupancy within the corridor and were only significant for deer. The occupancy models stress the importance of compounding direct and indirect anthropogenic influences operating at the regional level. Scientists and managers should consider these human impacts and their potential combined influence on wildlife persistence when assessing optimal habitat or considering management actions.

Captive-breeding and conservation of the European mammal diversity

Directory of Open Access Journals (Sweden)

Spartaco Gippoliti

2004-06-01

>Riassunto La riproduzione in cattività e la conservazione della diversità dei mammiferi europei Il numero di specie e la variabilità intraspecifica dei Mammiferi paleartici è stata generalmente sottostimata nei decenni in cui il Concetto Biologico di Specie è stato adottato. Ciò ha portato a sottovalutare le minacce ai Mammiferi europei e a basare l'attività di conservazione principalmente sulla traslocazione di individui da popolazioni vitali dell'Europa orientale. Molti di questi progetti hanno effettivamente portato al ritorno di alcune specie scomparse localmente e quindi al ripristino di una migliore funzionalità ecologica, ma non alla protezione della diversità dei Mammiferi europei. Il presente lavoro si avvale dei risultati di un numero sempre crescente di ricerche filogeografiche che hanno evidenziato complessi modelli di distribuzione e di differenziazione genetica in Europa. L'esistenza di Unità di Conservazione finora criptiche e a volte severamente minacciate, deve portare a riconsiderare il ruolo dei programmi di riproduzione in cattività per i Mammiferi europei. Al fine di massimizzare l'utilizzo delle risorse disponibili, si propone di suddividere tali programmi in due categorie. I programmi di riproduzione in cattività Livello I fanno pienamente parte della strategia di conservazione di taxa seriamente minacciati, come Lynx pardinus o Ursus arctos marsicanus. Questi programmi devono essere finanziati da agenzie pubbliche e devono essere realizzati sia in strutture ad hoc che eventualmente in qualificati giardini zoologici. I programmi Livello II interessano taxa non in immediato pericolo ma potenzialmente vulnerabili per intrinseche caratteristiche biologiche. Tali programmi devono essere finanziati dal settore privato e dovrebbero essere realizzati esclusivamente in giardini zoologici, allo scopo di non distogliere fondi dalla conservazione 'in situ'. Una serie di studi dimostra che la reintroduzione anche di

Loss-of-function of neuroplasticity-related genes confers risk for human neurodevelopmental disorders.

Science.gov (United States)

Smith, Milo R; Glicksberg, Benjamin S; Li, Li; Chen, Rong; Morishita, Hirofumi; Dudley, Joel T

2018-01-01

High and increasing prevalence of neurodevelopmental disorders place enormous personal and economic burdens on society. Given the growing realization that the roots of neurodevelopmental disorders often lie in early childhood, there is an urgent need to identify childhood risk factors. Neurodevelopment is marked by periods of heightened experience-dependent neuroplasticity wherein neural circuitry is optimized by the environment. If these critical periods are disrupted, development of normal brain function can be permanently altered, leading to neurodevelopmental disorders. Here, we aim to systematically identify human variants in neuroplasticity-related genes that confer risk for neurodevelopmental disorders. Historically, this knowledge has been limited by a lack of techniques to identify genes related to neurodevelopmental plasticity in a high-throughput manner and a lack of methods to systematically identify mutations in these genes that confer risk for neurodevelopmental disorders. Using an integrative genomics approach, we determined loss-of-function (LOF) variants in putative plasticity genes, identified from transcriptional profiles of brain from mice with elevated plasticity, that were associated with neurodevelopmental disorders. From five shared differentially expressed genes found in two mouse models of juvenile-like elevated plasticity (juvenile wild-type or adult Lynx1-/- relative to adult wild-type) that were also genotyped in the Mount Sinai BioMe Biobank we identified multiple associations between LOF genes and increased risk for neurodevelopmental disorders across 10,510 patients linked to the Mount Sinai Electronic Medical Records (EMR), including epilepsy and schizophrenia. This work demonstrates a novel approach to identify neurodevelopmental risk genes and points toward a promising avenue to discover new drug targets to address the unmet therapeutic needs of neurodevelopmental disease.

A comparison of food habits and prey preferences of Amur tiger (Panthera tigris altaica Temminck, 1844) at the southwest Primorskii Krai in Russia and Hunchun in China.

Science.gov (United States)

Gu, Jiayin; Yu, Lan; Hua, Yan; Ning, Yao; Heng, Bao; Qi, Jinzhe; Long, Zexv; Yao, Mingyuan; Huang, Chong; Li, Zhilin; Lang, Jianming; Jiang, Guangshun; Ma, Jianzhang

2018-05-03

A small, isolated Amur tiger population is living at the southwest Primorskii Krai in Russia and Hunchun in China region. Many of them with "dual nationality" cross the border frequently. Formulating effective conservation strategies requires a clear understanding of tiger food requirements in both Russia and China sides, while Russia side already have clear results of it. We used scat analysis combined with data on the abundance of four prey species to estimate Amur tiger diet and prey preferences in Hunchun. We examined 53 tiger samples from 2011-2016 and found that tigers preyed on 12 species (11 species in winter), four of which were domestic animals with 33.58% biomass contribution, and got the first record that Amur tiger eat lynx in this area. Tigers showed a strong preference for wild boar (Jacobs index: +0.849), which were also the most frequently consumed prey, and a strong avoidance to roe deer (Jacobs index: -0.693). On the Russian side, domestic animals (just dog) were rarely found in tiger scat, and tiger did not show strong avoidance to roe deer, but to sika deer. We also found red deer footprints during winter surveys and that tigers ate red deer on the Chinese side, while there was no record of red deer on the Russian side. Reducing or eliminating human disturbance, such as grazing, is essential to recovering tiger prey and habitat in this area and the Sino-Russia joint ungulate annual survey is indispensable for prey estimates of this small, isolated Amur tiger population. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Real-time operating system timing jitter and its impact on motor control

Science.gov (United States)

Proctor, Frederick M.; Shackleford, William P.

2001-12-01

General-purpose microprocessors are increasingly being used for control applications due to their widespread availability and software support for non-control functions like networking and operator interfaces. Two classes of real-time operating systems (RTOS) exist for these systems. The traditional RTOS serves as the sole operating system, and provides all OS services. Examples include ETS, LynxOS, QNX, Windows CE and VxWorks. RTOS extensions add real-time scheduling capabilities to non-real-time OSes, and provide minimal services needed for the time-critical portions of an application. Examples include RTAI and RTL for Linux, and HyperKernel, OnTime and RTX for Windows NT. Timing jitter is an issue in these systems, due to hardware effects such as bus locking, caches and pipelines, and software effects from mutual exclusion resource locks, non-preemtible critical sections, disabled interrupts, and multiple code paths in the scheduler. Jitter is typically on the order of a microsecond to a few tens of microseconds for hard real-time operating systems, and ranges from milliseconds to seconds in the worst case for soft real-time operating systems. The question of its significance on the performance of a controller arises. Naturally, the smaller the scheduling period required for a control task, the more significant is the impact of timing jitter. Aside from this intuitive relationship is the greater significance of timing on open-loop control, such as for stepper motors, than for closed-loop control, such as for servo motors. Techniques for measuring timing jitter are discussed, and comparisons between various platforms are presented. Techniques to reduce jitter or mitigate its effects are presented. The impact of jitter on stepper motor control is analyzed.

GENETIC CHARACTERIZATION OF CANINE PARVOVIRUS IN SYMPATRIC FREE-RANGING WILD CARNIVORES IN PORTUGAL.

Science.gov (United States)

Miranda, Carla; Santos, Nuno; Parrish, Colin; Thompson, Gertrude

2017-10-01

Since its emergence in the 1970s, canine parvovirus (CPV) has been reported in domestic and nondomestic carnivores worldwide with severe implications on their health and survival. Here, we aim to better understand CPV circulation in multihost-pathogens systems by characterizing CPV DNA or viruses in 227 free-ranging wild carnivores of 12 species from Portugal. Collected samples during 1995-2011 were analyzed by PCR and sequence analysis. The canine parvovirus DNA was detected in 4 (2%) animals of two species, namely in wolves (Canis lupus; 3/63, 5%, 95% confidence interval=1.6-3.15) and in a stone marten (Martes foina; 1/36, 3%, 95% confidence interval=0.5-14.2). Viruses in two wolves had VP2 residue 426 as aspartic acid (so-called CPV-2b) and the third had VP2 residue 426 as asparagine (CPV-2a), while the virus in the stone marten uniquely had VP2 residue 426 as glutamic acid (CPV-2c). The comparative analysis of the full-length VP2 gene of our isolates showed other nonsynonymous mutations. The phylogenetic analysis demonstrated that the sequences from wolves clustered together, showing a close relationship with European domestic dogs (Canis lupus familiaris) and wolf strains while the viral sequence from the stone marten grouped with other viruses contained the glutamic acid VP2 426 along with raccoon (Procyon lotor), bobcat (Lynx rufus), and domestic dog strains. This study confirmed that wild carnivores in Portugal are infected by CPV variants, strongly suggesting viral transmission between the wild and domestic populations and suggesting a need for a better understanding of the epidemiology of the disease and its management in wild populations.

EARLY-TYPE GALAXIES AT z ∼ 1.3. II. MASSES AND AGES OF EARLY-TYPE GALAXIES IN DIFFERENT ENVIRONMENTS AND THEIR DEPENDENCE ON STELLAR POPULATION MODEL ASSUMPTIONS

International Nuclear Information System (INIS)

Raichoor, A.; Mei, S.; Huertas-Company, M.; Nakata, F.; Kodama, T.; Stanford, S. A.; Rettura, A.; Jee, M. J.; Holden, B. P.; Illingworth, G.; Postman, M.; White, R. L.; Rosati, P.; Blakeslee, J. P.; Demarco, R.; Eisenhardt, P.; Tanaka, M.

2011-01-01

We have derived masses and ages for 79 early-type galaxies (ETGs) in different environments at z ∼ 1.3 in the Lynx supercluster and in the GOODS/CDF-S field using multi-wavelength (0.6-4.5 μm; KPNO, Palomar, Keck, Hubble Space Telescope, Spitzer) data sets. At this redshift the contribution of the thermally pulsing asymptotic giant branch (TP-AGB) phase is important for ETGs, and the mass and age estimates depend on the choice of the stellar population model used in the spectral energy distribution fits. We describe in detail the differences among model predictions for a large range of galaxy ages, showing the dependence of these differences on age. Current models still yield large uncertainties. While recent models from Maraston and Charlot and Bruzual offer better modeling of the TP-AGB phase with respect to less recent Bruzual and Charlot models, their predictions do not often match. The modeling of this TP-AGB phase has a significant impact on the derived parameters for galaxies observed at high redshift. Some of our results do not depend on the choice of the model: for all models, the most massive galaxies are the oldest ones, independent of the environment. When using the Maraston and Charlot and Bruzual models, the mass distribution is similar in the clusters and in the groups, whereas in our field sample there is a deficit of massive (M ∼> 10 11 M sun ) ETGs. According to those last models, ETGs belonging to the cluster environment host on average older stars with respect to group and field populations. This difference is less significant than the age difference in galaxies of different masses.

Isolation of Bartonella henselae and Two New Bartonella Subspecies, Bartonella koehlerae Subspecies boulouisii subsp. nov. and Bartonella koehlerae Subspecies bothieri subsp. nov. from Free-Ranging Californian Mountain Lions and Bobcats

Science.gov (United States)

Chomel, Bruno B.; Molia, Sophie; Kasten, Rickie W.; Borgo, Gina M.; Stuckey, Matthew J.; Maruyama, Soichi; Chang, Chao-chin; Haddad, Nadia; Koehler, Jane E.

2016-01-01

Domestic cats are the natural reservoir of Bartonella henselae, B. clarridgeiae and B. koehlerae. To determine the role of wild felids in the epidemiology of Bartonella infections, blood was collected from 14 free-ranging California mountain lions (Puma concolor) and 19 bobcats (Lynx rufus). Bartonella spp. were isolated from four (29%) mountain lions and seven (37%) bobcats. These isolates were characterized using growth characteristics, biochemical reactions, molecular techniques, including PCR-RFLP of selected genes or interspacer region, pulsed-field gel electrophoresis (PFGE), partial sequencing of several genes, and DNA-DNA hybridization. Two isolates were identical to B. henselae genotype II. All other isolates were distinguished from B. henselae and B. koehlerae by PCR-RFLP of the gltA gene using endonucleases HhaI, TaqI and AciI, with the latter two discriminating between the mountain lion and the bobcat isolates. These two novel isolates displayed specific PFGE profiles distinct from B. henselae, B. koehlerae and B. clarridgeiae. Sequences of amplified gene fragments from the three mountain lion and six bobcat isolates were closely related to, but distinct from, B. henselae and B. koehlerae. Finally, DNA-DNA hybridization studies demonstrated that the mountain lion and bobcat strains are most closely related to B. koehlerae. We propose naming the mountain lion isolates B. koehlerae subsp. boulouisii subsp. nov. (type strain: L-42-94), and the bobcat isolates B. koehlerae subsp. bothieri subsp. nov. (type strain: L-17-96), and to emend B. koehlerae as B. koehlerae subsp. koehlerae. The mode of transmission and the zoonotic potential of these new Bartonella subspecies remain to be determined. PMID:26981874

Husky Energy Inc. 2004 annual report : building on the horizon

International Nuclear Information System (INIS)

2005-01-01

Financial information from Calgary-based Husky Energy Inc. was presented in this annual report and a review of their 2004 operations was made available for the benefit of shareholders. Husky Energy is one of Canada's largest producers of oil and gas. It is an integrated energy and energy-related company consisting of 3 segments: upstream, midstream and refined products. The report lists major achievements for 2004 as well as plans for future activities. Husky share prices at December 31 2004 were $34.25. Total shareholder return was 50 per cent, including ordinary and special dividends. Achievements for 2004 included 420 cold productions heavy wells drilled and new discoveries in the Ekwan/Bivouac and Lynx/Copton areas. International achievements included three successful wells drilled in Wenchang, China. In the midstream and refined products businesses, Husky Energy has achieved more than 900,000 barrels of oil equivalent per day as well as setting a new asphalt sales record. In addition, engineering for a de bottlenecking project is 60 per cent complete. Husky Energy has also commenced blending of the new Western Canada Select crude oil stream. Plans for 2005 included growth in heavy oil production up to 10 per cent, construction of the Tucker Oil Sands Project, additional drilling in Wenchang, China and the completion of 80 per cent of the Lloydminster ethanol plant. This annual report includes an auditor's report of the company's energy resource activities. An operations review was also presented along with consolidated financial statements, a summarized balance sheet of assets, liabilities/surplus and net assets, and common share information. Revenue and expenditure statements were summarized by source. tabs., figs

Vif of Feline Immunodeficiency Virus from Domestic Cats Protects against APOBEC3 Restriction Factors from Many Felids▿

Science.gov (United States)

Zielonka, Jörg; Marino, Daniela; Hofmann, Henning; Yuhki, Naoya; Löchelt, Martin; Münk, Carsten

2010-01-01

To get more insight into the role of APOBEC3 (A3) cytidine deaminases in the species-specific restriction of feline immunodeficiency virus (FIV) of the domestic cat, we tested the A3 proteins present in big cats (puma, lion, tiger, and lynx). These A3 proteins were analyzed for expression and sensitivity to the Vif protein of FIV. While A3Z3s and A3Z2-Z3s inhibited Δvif FIV, felid A3Z2s did not show any antiviral activity against Δvif FIV or wild-type (wt) FIV. All felid A3Z3s and A3Z2-Z3s were sensitive to Vif of the domestic cat FIV. Vif also induced depletion of felid A3Z2s. Tiger A3s showed a moderate degree of resistance against the Vif-mediated counter defense. These findings may imply that the A3 restriction system does not play a major role to prevent domestic cat FIV transmission to other Felidae. In contrast to the sensitive felid A3s, many nonfelid A3s actively restricted wt FIV replication. To test whether VifFIV can protect also the distantly related human immunodeficiency virus type 1 (HIV-1), a chimeric HIV-1.VifFIV was constructed. This HIV-1.VifFIV was replication competent in nonpermissive feline cells expressing human CD4/CCR5 that did not support the replication of wt HIV-1. We conclude that the replication of HIV-1 in some feline cells is inhibited only by feline A3 restriction factors and the absence of the appropriate receptor or coreceptor. PMID:20444897

Vif of feline immunodeficiency virus from domestic cats protects against APOBEC3 restriction factors from many felids.

Science.gov (United States)

Zielonka, Jörg; Marino, Daniela; Hofmann, Henning; Yuhki, Naoya; Löchelt, Martin; Münk, Carsten

2010-07-01

To get more insight into the role of APOBEC3 (A3) cytidine deaminases in the species-specific restriction of feline immunodeficiency virus (FIV) of the domestic cat, we tested the A3 proteins present in big cats (puma, lion, tiger, and lynx). These A3 proteins were analyzed for expression and sensitivity to the Vif protein of FIV. While A3Z3s and A3Z2-Z3s inhibited Deltavif FIV, felid A3Z2s did not show any antiviral activity against Deltavif FIV or wild-type (wt) FIV. All felid A3Z3s and A3Z2-Z3s were sensitive to Vif of the domestic cat FIV. Vif also induced depletion of felid A3Z2s. Tiger A3s showed a moderate degree of resistance against the Vif-mediated counter defense. These findings may imply that the A3 restriction system does not play a major role to prevent domestic cat FIV transmission to other Felidae. In contrast to the sensitive felid A3s, many nonfelid A3s actively restricted wt FIV replication. To test whether Vif(FIV) can protect also the distantly related human immunodeficiency virus type 1 (HIV-1), a chimeric HIV-1.Vif(FIV) was constructed. This HIV-1.Vif(FIV) was replication competent in nonpermissive feline cells expressing human CD4/CCR5 that did not support the replication of wt HIV-1. We conclude that the replication of HIV-1 in some feline cells is inhibited only by feline A3 restriction factors and the absence of the appropriate receptor or coreceptor.

Postsacral vertebral morphology in relation to tail length among primates and other mammals.

Science.gov (United States)

Russo, Gabrielle A

2015-02-01

Tail reduction/loss independently evolved in a number of mammalian lineages, including hominoid primates. One prerequisite to appropriately contextualizing its occurrence and understanding its significance is the ability to track evolutionary changes in tail length throughout the fossil record. However, to date, the bony correlates of tail length variation among living taxa have not been comprehensively examined. This study quantifies postsacral vertebral morphology among living primates and other mammals known to differ in relative tail length (RTL). Linear and angular measurements with known biomechanical significance were collected on the first, mid-, and transition proximal postsacral vertebrae, and their relationship with RTL was assessed using phylogenetic generalized least-squares regression methods. Compared to shorter-tailed primates, longer-tailed primates possess a greater number of postsacral vertebral features associated with increased proximal tail flexibility (e.g., craniocaudally longer vertebral bodies), increased intervertebral body joint range of motion (e.g., more circularly shaped cranial articular surfaces), and increased leverage of tail musculature (e.g., longer spinous processes). These observations are corroborated by the comparative mammalian sample, which shows that distantly related short-tailed (e.g., Phascolarctos, Lynx) and long-tailed (e.g., Dendrolagus, Acinonyx) nonprimate mammals morphologically converge with short-tailed (e.g., Macaca tonkeana) and long-tailed (e.g., Macaca fascicularis) primates, respectively. Multivariate models demonstrate that the variables examined account for 70% (all mammals) to 94% (only primates) of the variance in RTL. Results of this study may be used to infer the tail lengths of extinct primates and other mammals, thereby improving our understanding about the evolution of tail reduction/loss. © 2014 Wiley Periodicals, Inc.

Description of the lynx spiders of a canopy fogging project in northern Borneo (Araneae: Oxyopidae), with description of a new genus and six new species of Hamataliwa

NARCIS (Netherlands)

Deeleman - Reinhold, C.L.

2009-01-01

All oxyopid spider species collected in a long-term ecological canopy project in northern Borneo are described. A total of nine species in three genera could be established, one of which belongs to a new genus. Four species could be assigned to known species, five are described as new species in the

Atypical fatal sarcocystosis associated with Sarcocystis neurona in a White-nosed coati (Nasua narica molaris).

Science.gov (United States)

Dubey, Jitender P; Trupkiewicz, John G; Verma, Shiv K; Mowery, Joseph D; Adedoyin, Gloria; Georoff, Tim; Grigg, Michael E

2017-11-30

The protozoan parasite Sarcocystis neurona is an important cause of disease in horses (equine protozoal myeloencephalitis, EPM) and marine mammals. Isolated reports of clinical EPM-like disease have been documented in a zebra, raccoon, domestic cat, domestic dog, ferret, skunk, mink, lynx, red panda and fisher. The predominant disease is encephalomyelitis associated with schizonts in neural tissues. Here, we report highly disseminated sarcocystosis, in many tissues of a captive White-nosed coati (Nasua narica molaris). The 14year old, neutered male coati was euthanized due to progressive weakness, lethargy, and inappetence. Schizonts, including free and intracellular merozoites were detected in many cell types, and differed morphologically from S. neurona schizonts in horses. Only a few sarcocysts were seen in skeletal muscle and the myocardium. Immunohistochemically, the protozoa reacted positively to S. neurona but not to Toxoplasma gondii antibodies. Severe inflammtory disease detected in the stomach, intestine, adrenal and thyroid glands, ciliary body of eye, and urinary bladder associated with schizonts in the coati has not been reported earlier in any host with EPM. Although, a few schizonts were found in the brain, encephalitis was minimal and not the cause of clinical signs. Multilocus PCR-DNA sequencing using DNA derived from the coati lung tissue identified an S. neurona infection using the 18S, 28S and ITS-1 markers, and a novel genotype using primer pairs against antigenic surface proteins (SnSAG3, SnSAG4, SnSAG1-5-6) and microsatellite markers (MS, SN7, SN9). Although the genotype was similar to the widely distributed Type VI strain, it possessed a novel allele at SnSAG5, and a different MS combination of repeats at SN7 and SN9. Whether this severe parasitism was related to the host or the parasite needs further investigation. Published by Elsevier B.V.

Clinical Sarcocystis neurona, Sarcocystis canis, Toxoplasma gondii, and Neospora caninum infections in dogs.

Science.gov (United States)

Dubey, J P; Chapman, Jennifer L; Rosenthal, Benjamin M; Mense, M; Schueler, Ronald L

2006-04-15

Sarcocystis neurona, Sarcocystis canis, Toxoplasma gondii, and Neospora caninum are related apicomplexans that can cause systemic illness in many species of animals, including dogs. We investigated one breeder's 25 Basset Hounds for these infections. In addition, tissues from dogs and other non-canine hosts previously reported as S. canis infections were studied retrospectively. Schizonts resembling those of S. neurona, and recognized by polyclonal rabbit anti-S. neurona antibodies, were found in six of eight retrospective cases, as well as in two additional dogs (one Basset Hound, one Springer Spaniel) not previously reported. S. neurona schizonts were found in several tissues including the central nervous system, lungs, and kidneys. Fatal toxoplasmosis was diagnosed in an adult dog, and neosporosis was diagnosed in an adult and a pup related to the one diagnosed with S. neurona. No serological reactivity to S. neurona antibodies occurred when S. canis-like liver schizonts were retrospectively assayed from two dogs, a dolphin, a sea lion, a horse, a chinchilla, a black or either of two polar bears. Sequencing conserved (18S) and variable (ITS-1) portions of nuclear ribosomal DNA isolated from the schizont-laden liver of a polar bear distinguished it from all previously characterized species of Sarcocystis. We take this genetic signature as provisionally representative of S. canis, an assumption that should be tested with future sequencing of similar liver infections in other mammalian hosts. These findings further extend the uncharacteristically broad intermediate host range for S. neurona, which also causes a neurologic disease in cats, mink, raccoons, skunks, Pacific harbor seals, ponies, zebras, lynxes, and sea otters. Further work is necessary to delineate the causative agent(s) of other cases of canine sarcocystosis, and in particular to specify the attributes of S. canis, which corresponds morphologically to infections reported from wide range of terrestrial

The first decade of commercial space tourism

Science.gov (United States)

Chang, Yi-Wei

2015-03-01

In order to provide a basis for assessing the future prospects and challenges of space tourism, this paper begins with a brief overview of the history of space tourism. This is followed by a discussion on market demand and current developments in the academic community, as well as the status of traffic tools, regulations and legalization. In market demand, although studies conducted in 1990s assumed the possibility of 500,000 per year in space tourists and several billion USD of annual revenue, in 2008 a relatively modest 13,000 per year was predicted. At this time traffic transport tools including the Soyuz system, CST-100, DragonRider and International Space Station (ISS) can only provide a few tens in spare seats for space tourists per year compared to the projected 20,000 plus seat capacity of the Lynx, Dream Chaser and SpaceShipTwo (SS2) fleets, which have the potential to conduct their first full suborbital test flight and first commercial flight within the coming decade. Added to this, the US government has only a regulatory regime that supports privately owned suborbital space tourism (SST) and no government funded orbital space tourism (OST). These evidences reveal a very high and advantageous potential for SST to form a space tourism industry in the coming decade, whereas the possibility of OST is relatively low. However, even though the prosperity of SST in the coming years is expectable, its maturity, reliability and safety still need to win the confidence of the general public. For examples, the announcement of changes to fuel used in the SS2 rocket engine in May 2014 and the crash of one SS2 while performing test flight on 31 October 2014 indicated the need for much careful preparation, as any accident in commercial operation could seriously damage or even kill its future prospects.

Ética e profética nas Mitológicas de Lévi-Strauss

Directory of Open Access Journals (Sweden)

Renato Sztutman

2009-06-01

Full Text Available Este artigo intenta extrair das Mitológicas de Claude Lévi-Strauss uma ética e uma filosofia política (em princípio, ameríndias. Busca-se aqui a um só tempo responder e estender a provocação de Pierre Clastres, para quem a análise estrutural não teria se ocupado de tamanhas questões. Para realizar esta discussão, o foco será dado em duas obras de Lévi-Strauss: As origens dos modos à mesa, o terceiro volume das Mitológicas, e História de lince, a última das "pequenas mitológicas". Se a primeira finda com um excurso sobre a "moral dos mitos", a segunda principia com uma reflexão sobre a capacidade da mitologia de fornecer leituras da história, por exemplo, o "encontro" com o mundo europeu. Essas leituras, de sua parte, devem estar na base do que a literatura etnológica recente reconheceu como movimentos proféticos.This article focus Claude Lévi-Strauss' reflection on amerindian ethic and political thought. We suggest that we could read many passages of Mythologiques as if they contained sorts of replies as well as developments of some of Pierre Clastres' provocations and critics directed to structuralism. We will analyse particularly two books: Les origines des manières à table, Mythologiques' third volume, and Histoire de lynx, the last of the petites mythologiques. The first one ends with an interesting reflection on the "mythical moralism", while the second one starts with the problem of how amerindian mythologies can offer interpretations of history, interpretations of the "encounter" with europeans, for instance. These, we suppose, must be on the basis of what ethnological recent literature called "prophetic movements".

Seroprevalence of Trypanosoma cruzi Among Eleven Potential Reservoir Species from Six States Across the Southern United States

Science.gov (United States)

Brown, Emily L.; Roellig, Dawn M.; Gompper, Matthew E.; Monello, Ryan J.; Wenning, Krista M.; Gabriel, Mourad W.

2010-01-01

Abstract Trypanosoma cruzi, the causative agent of Chagas' disease, is a substantial public health concern in Latin America. Although rare in humans and domestic animals in the United States, T. cruzi is commonly detected in some wildlife species, most commonly raccoons (Procyon lotor) and Virginia opossums (Didelphis virginiana). To increase our understanding of the reservoir host species range and geographic distribution, 11 species of mammals from six states spanning the known range of T. cruzi (Arizona, California, Florida, Georgia, Missouri, and Virginia) were tested for antibodies to T. cruzi using indirect immunofluorescent antibody testing. In addition, culture isolation attempts were conducted on a limited number of animals from Georgia and Florida. Evidence of T. cruzi was found in every state except California; however, low numbers of known reservoirs were tested in California. In general, the highest seroprevalence rates were found in raccoons (0–68%) and opossums (17–52%), but antibodies to T. cruzi were also detected in small numbers of striped skunks (Mephitis mephitis) from Arizona and Georgia, bobcats (Lynx rufus) from Georgia, two coyotes (Canis latrans) from Georgia and Virginia, and a ringtail (Bassariscus astutus) from Arizona. Culture-based prevalence rates for raccoons were significantly greater than those for opossums; however, seroprevalences of raccoons and opossums from several geographic locations in Georgia and Florida were not different, indicating that exposure rates of these two species are similar within these areas. For both raccoons and opossums, seroprevalence was significantly higher in females than in males. No difference was detected in seroprevalence between adults and juveniles and between animals caught in urban and rural locations. Our results indicate that T. cruzi prevalence varies by host species, host characteristics, and geographic region and provides data to guide future studies on the natural history of T. cruzi

Geo-spatial aspects of acceptance of illegal hunting of large carnivores in Scandinavia.

Science.gov (United States)

Gangaas, Kristin E; Kaltenborn, Bjørn P; Andreassen, Harry P

2013-01-01

Human-carnivore conflicts are complex and are influenced by: the spatial distribution of the conflict species; the organisation and intensity of management measures such as zoning; historical experience with wildlife; land use patterns; and local cultural traditions. We have used a geographically stratified sampling of social values and attitudes to provide a novel perspective to the human - wildlife conflict. We have focused on acceptance by and disagreements between residents (measured as Potential Conflict Index; PCI) towards illegal hunting of four species of large carnivores (bear, lynx, wolf, wolverine). The study is based on surveys of residents in every municipality in Sweden and Norway who were asked their opinion on illegal hunting. Our results show how certain social values are associated with acceptance of poaching, and how these values differ geographically independent of carnivore abundance. Our approach differs from traditional survey designs, which are often biased towards urban areas. Although these traditional designs intend to be representative of a region (i.e. a random sample from a country), they tend to receive relatively few respondents from rural areas that experience the majority of conflict with carnivores. Acceptance of poaching differed significantly between Norway (12.7-15.7% of respondents) and Sweden (3.3-4.1% of respondents). We found the highest acceptance of illegal hunting in rural areas with free-ranging sheep and strong hunting traditions. Disagreements between residents (as measured by PCI) were highest in areas with intermediate population density. There was no correlation between carnivore density and either acceptance of illegal hunting or PCI. A strong positive correlation between acceptance of illegal hunting and PCI showed that areas with high acceptance of illegal hunting are areas with high potential conflict between people. Our results show that spatially-stratified surveys are required to reveal the large scale

Constraining hydrostatic mass bias of galaxy clusters with high-resolution X-ray spectroscopy

Science.gov (United States)

Ota, Naomi; Nagai, Daisuke; Lau, Erwin T.

2018-04-01

Gas motions in galaxy clusters play important roles in determining the properties of the intracluster medium (ICM) and in the constraint of cosmological parameters via X-ray and Sunyaev-Zel'dovich effect observations of galaxy clusters. The Hitomi measurements of gas motions in the core of the Perseus Cluster have provided new insights into the physics in galaxy clusters. The XARM mission, equipped with the Resolve X-ray micro-calorimeter, will continue Hitomi's legacy by measuring ICM motions through Doppler shifting and broadening of emission lines in a larger number of galaxy clusters, and at larger radii. In this work, we investigate how well we can measure bulk and turbulent gas motions in the ICM with XARM, by analyzing mock XARM simulations of galaxy clusters extracted from cosmological hydrodynamic simulations. We assess how photon counts, spectral fitting methods, multiphase ICM structure, deprojections, and region selection affect the measurements of gas motions. We first show that XARM is capable of recovering the underlying spherically averaged turbulent and bulk velocity profiles for dynamically relaxed clusters to within ˜50% with a reasonable amount of photon counts in the X-ray emission lines. We also find that there are considerable azimuthal variations in the ICM velocities, where the velocities measured in a single azimuthal direction can significantly deviate from the true value even in dynamically relaxed systems. Such variation must be taken into account when interpreting data and developing observing strategies. We will discuss the prospect of using the upcoming XARM mission to measure non-thermal pressure and to correct for the hydrostatic mass bias of galaxy clusters. Our results are broadly applicable for future X-ray missions, such as Athena and Lynx.

High female mortality resulting in herd collapse in free-ranging domesticated reindeer (Rangifer tarandus tarandus in Sweden.

Directory of Open Access Journals (Sweden)

Birgitta Åhman

Full Text Available Reindeer herding in Sweden is a form of pastoralism practised by the indigenous Sámi population. The economy is mainly based on meat production. Herd size is generally regulated by harvest in order not to overuse grazing ranges and keep a productive herd. Nonetheless, herd growth and room for harvest is currently small in many areas. Negative herd growth and low harvest rate were observed in one of two herds in a reindeer herding community in Central Sweden. The herds (A and B used the same ranges from April until the autumn gathering in October-December, but were separated on different ranges over winter. Analyses of capture-recapture for 723 adult female reindeer over five years (2007-2012 revealed high annual losses (7.1% and 18.4%, for herd A and B respectively. A continuing decline in the total reindeer number in herd B demonstrated an inability to maintain the herd size in spite of a very small harvest. An estimated breakpoint for when herd size cannot be kept stable confirmed that the observed female mortality rate in herd B represented a state of herd collapse. Lower calving success in herd B compared to A indicated differences in winter foraging conditions. However, we found only minor differences in animal body condition between the herds in autumn. We found no evidence that a lower autumn body mass generally increased the risk for a female of dying from one autumn to the next. We conclude that the prime driver of the on-going collapse of herd B is not high animal density or poor body condition. Accidents or disease seem unlikely as major causes of mortality. Predation, primarily by lynx and wolverine, appears to be the most plausible reason for the high female mortality and state of collapse in the studied reindeer herding community.

Impacts of Mesopredator Control on Conservation of Mesopredators and Their Prey.

Directory of Open Access Journals (Sweden)

L Mike Conner

Full Text Available Declining large carnivore populations, increased habitat fragmentation, declining interests in fur trapping, and other anthropogenic factors can all lead to increased mesopredator populations and these may negatively impact biodiversity. Lethal mesopredator control potentially mitigates some of these effects but can be controversial, largely because impacts on mesopredator populations have not been evaluated. Estimating these impacts may reduce controversies while increasing our understanding of when lethal control may be beneficial. Therefore, we analyzed published mesopredator removal data to determine if mesopredator removal rates changed over time. Removals of medium,(e.g., raccoons (Procyon lotor or red foxes (Vulpes vulpes, and large, i.e., bobcats (Lynx rufus or coyotes (Canis latrans, mesopredators were consistent from year to year and over the duration of study (i.e., number removed during the first and last years of studies were similar. In contrast, removals of small mesopredators, e.g., weasels (Mustela spp. or spotted skunks (Spilogale putorius, declined over the duration of study. Study area size, number of species targeted for removal, and duration of removal effort were poor predictors of removal rates. Our analyses suggest that: (1 control, as typically implemented, is unlikely to cause negative long-term impacts on populations of medium and large mesopredators but may negatively impact small mesopredators, (2 if mesopredator control benefits prey, recurring removals will generally be needed to maintain benefits, and (3 timing of removals will be important to achieve management goals. We suggest that mesopredator control efforts are frequently spatially structured harvests from continuously distributed populations. This may explain (1 why removal of small mesopredators declined over time; whereas, medium and large mesopredator removals remained consistent, and (2 why some prey failed to respond to mesopredator control efforts.

High Trypanosoma cruzi infection prevalence associated with minimal cardiac pathology among wild carnivores in central Texas

Directory of Open Access Journals (Sweden)

Rachel Curtis-Robles

2016-08-01

Full Text Available Infection with the zoonotic vector-borne protozoal parasite Trypanosoma cruzi causes Chagas disease in humans and dogs throughout the Americas. Despite the recognized importance of various wildlife species for perpetuating Trypanosoma cruzi in nature, relatively little is known about the development of cardiac disease in infected wildlife. Using a cross-sectional study design, we collected cardiac tissue and blood from hunter-donated wildlife carcasses- including raccoon (Procyon lotor, coyote (Canis latrans, gray fox (Urocyon cinereoargenteus, and bobcat (Lynx rufus – from central Texas, a region with established populations of infected triatomine vectors and increasing diagnoses of Chagas disease in domestic dogs. Based on PCR analysis, we found that 2 bobcats (14.3%, 12 coyotes (14.3%, 8 foxes (13.8%, and 49 raccoons (70.0% were positive for T. cruzi in at least one sample (right ventricle, apex, and/or blood clot. Although a histologic survey of right ventricles showed that 21.1% of 19 PCR-positive hearts were characterized by mild lymphoplasmocytic infiltration, no other lesions and no amastigotes were observed in any histologic section. DNA sequencing of the TcSC5D gene revealed that raccoons were infected with T. cruzi strain TcIV, and a single racoon harbored a TcI/TcIV mixed infection. Relative to other wildlife species tested here, our data suggest that raccoons may be important reservoirs of TcIV in Texas and a source of infection for indigenous triatomine bugs. The overall high level of infection in this wildlife community likely reflects high levels of vector contact, including ingestion of bugs. Although the relationship between the sylvatic cycle of T. cruzi transmission and human disease risk in the United States has yet to be defined, our data suggest that hunters and wildlife professionals should take precautions to avoid direct contact with potentially infected wildlife tissues.

Constraining hydrostatic mass bias of galaxy clusters with high-resolution X-ray spectroscopy

Science.gov (United States)

Ota, Naomi; Nagai, Daisuke; Lau, Erwin T.

2018-06-01

Gas motions in galaxy clusters play important roles in determining the properties of the intracluster medium (ICM) and in the constraint of cosmological parameters via X-ray and Sunyaev-Zel'dovich effect observations of galaxy clusters. The Hitomi measurements of gas motions in the core of the Perseus Cluster have provided new insights into the physics in galaxy clusters. The XARM mission, equipped with the Resolve X-ray micro-calorimeter, will continue Hitomi's legacy by measuring ICM motions through Doppler shifting and broadening of emission lines in a larger number of galaxy clusters, and at larger radii. In this work, we investigate how well we can measure bulk and turbulent gas motions in the ICM with XARM, by analyzing mock XARM simulations of galaxy clusters extracted from cosmological hydrodynamic simulations. We assess how photon counts, spectral fitting methods, multiphase ICM structure, deprojections, and region selection affect the measurements of gas motions. We first show that XARM is capable of recovering the underlying spherically averaged turbulent and bulk velocity profiles for dynamically relaxed clusters to within ˜50% with a reasonable amount of photon counts in the X-ray emission lines. We also find that there are considerable azimuthal variations in the ICM velocities, where the velocities measured in a single azimuthal direction can significantly deviate from the true value even in dynamically relaxed systems. Such variation must be taken into account when interpreting data and developing observing strategies. We will discuss the prospect of using the upcoming XARM mission to measure non-thermal pressure and to correct for the hydrostatic mass bias of galaxy clusters. Our results are broadly applicable for future X-ray missions, such as Athena and Lynx.

SU-E-J-91: Novel Epitaxial Silicon Array for Quality Assurance in Photon and Proton Therapy

International Nuclear Information System (INIS)

Talamonti, C; Zani, M; Scaringella, M; Bruzzi, M; Bucciolini, M; Menichelli, D; Friedl, F

2014-01-01

Purpose: to demonstrate suitability of a novel silicon array for measuring the dose properties of highly conformal photon and proton beams. Methods: prototype under test is a 24cm long linear array prototype, although the underlying technology is suitable to construct 2D arrays as well. It is based on a 64pixels monolithic sensor with 1mm pixel pitch, made of epitaxial ptype silicon. Thanks to design modularity, more sensors can be placed side by side without breaking pixel pitch. Flattened and unflattened photon beams, as well as proton radiation from a cyclotron in pencil beam scanning mode, were considered. Measurements of beam characteristics as percentage depth doses, dose profiles, output factors and energy response, which are necessary to deliver radiation with high precision and reliability, were performed. Results: Dose rate independence with photons was verified in the dose per pulse range 0.03 to 2mGy. Results clearly indicate nondependence of the detector sensitivity both for flattened and unflattened beams, with a variation of at most 0.5percentage. OFs were obtained for field with a lateral size ranging from 0.8cm to 16cm and the results are in good agreement with ion chamber A1SL, max difference less than 1.5percentage. Field sizes and beam penumbra were measured and compared to EBT film results. Concerning proton beams, sensitivity independence on dose rate was verified by changing the beam current in the interval 2-130Gy/s. Field sizes and beam penumbra measurements are in agreement with data taken with a scintillating 2D array with 0.5mm resolution IBA Lynx, and a better penumbra definition than an array of ionization chambers IBA MatriXX is reached. Conclusion: The device is a novel and valuable tool for QA both for photon and proton dose delivery. All measurements demonstrated its capability to measure with high spatial resolution many crucial properties of the RT beam

SU-E-J-91: Novel Epitaxial Silicon Array for Quality Assurance in Photon and Proton Therapy

Energy Technology Data Exchange (ETDEWEB)

Talamonti, C; Zani, M; Scaringella, M; Bruzzi, M; Bucciolini, M [University of Florence, Firenze (Italy); Menichelli, D; Friedl, F [IBA Dosimetry, Schwarzenbruck, Bavaria (Germany)

2014-06-01

Purpose: to demonstrate suitability of a novel silicon array for measuring the dose properties of highly conformal photon and proton beams. Methods: prototype under test is a 24cm long linear array prototype, although the underlying technology is suitable to construct 2D arrays as well. It is based on a 64pixels monolithic sensor with 1mm pixel pitch, made of epitaxial ptype silicon. Thanks to design modularity, more sensors can be placed side by side without breaking pixel pitch. Flattened and unflattened photon beams, as well as proton radiation from a cyclotron in pencil beam scanning mode, were considered. Measurements of beam characteristics as percentage depth doses, dose profiles, output factors and energy response, which are necessary to deliver radiation with high precision and reliability, were performed. Results: Dose rate independence with photons was verified in the dose per pulse range 0.03 to 2mGy. Results clearly indicate nondependence of the detector sensitivity both for flattened and unflattened beams, with a variation of at most 0.5percentage. OFs were obtained for field with a lateral size ranging from 0.8cm to 16cm and the results are in good agreement with ion chamber A1SL, max difference less than 1.5percentage. Field sizes and beam penumbra were measured and compared to EBT film results. Concerning proton beams, sensitivity independence on dose rate was verified by changing the beam current in the interval 2-130Gy/s. Field sizes and beam penumbra measurements are in agreement with data taken with a scintillating 2D array with 0.5mm resolution IBA Lynx, and a better penumbra definition than an array of ionization chambers IBA MatriXX is reached. Conclusion: The device is a novel and valuable tool for QA both for photon and proton dose delivery. All measurements demonstrated its capability to measure with high spatial resolution many crucial properties of the RT beam.

A Conversation on Data Mining Strategies in LC-MS Untargeted Metabolomics: Pre-Processing and Pre-Treatment Steps

Directory of Open Access Journals (Sweden)

Fidele Tugizimana

2016-11-01

Full Text Available Untargeted metabolomic studies generate information-rich, high-dimensional, and complex datasets that remain challenging to handle and fully exploit. Despite the remarkable progress in the development of tools and algorithms, the “exhaustive” extraction of information from these metabolomic datasets is still a non-trivial undertaking. A conversation on data mining strategies for a maximal information extraction from metabolomic data is needed. Using a liquid chromatography-mass spectrometry (LC-MS-based untargeted metabolomic dataset, this study explored the influence of collection parameters in the data pre-processing step, scaling and data transformation on the statistical models generated, and feature selection, thereafter. Data obtained in positive mode generated from a LC-MS-based untargeted metabolomic study (sorghum plants responding dynamically to infection by a fungal pathogen were used. Raw data were pre-processed with MarkerLynxTM software (Waters Corporation, Manchester, UK. Here, two parameters were varied: the intensity threshold (50–100 counts and the mass tolerance (0.005–0.01 Da. After the pre-processing, the datasets were imported into SIMCA (Umetrics, Umea, Sweden for more data cleaning and statistical modeling. In addition, different scaling (unit variance, Pareto, etc. and data transformation (log and power methods were explored. The results showed that the pre-processing parameters (or algorithms influence the output dataset with regard to the number of defined features. Furthermore, the study demonstrates that the pre-treatment of data prior to statistical modeling affects the subspace approximation outcome: e.g., the amount of variation in X-data that the model can explain and predict. The pre-processing and pre-treatment steps subsequently influence the number of statistically significant extracted/selected features (variables. Thus, as informed by the results, to maximize the value of untargeted metabolomic data

Range resolution and reproducibility of a dedicated phantom for proton PBS daily quality assurance.

Science.gov (United States)

Placidi, Lorenzo; Togno, Michele; Weber, Damien C; Lomax, Antony J; Hrbacek, Jan

2018-03-13

Wedge phantoms coupled with a CCD camera are suggested as a simple means to improve the efficiency of quality assurance for pencil beam scanning (PBS) proton therapy, in particular to verify energy/range consistency on a daily basis. The method is based on the analysis of an integral image created by a pencil beam (PB) pattern delivered through a wedge. We have investigated the reproducibility of this method and its dependence on setup and positional beam errors for a commercially available phantom (Sphinx ® , IBA Dosimetry) and CCD camera (Lynx ® , IBA Dosimetry) system. The phantom includes 4 wedges of different thickness, allowing verification of the range for 4 energies within one integral image. Each wedge was irradiated with a line pattern of clinical energies (120, 150, 180 and 230MeV). The equipment was aligned to the isocenter using lasers, and the delivery was repeated for 5 consecutive days, 4 times each day. Range was computed using the myQA software (IBA Dosimetry) and inter- and intra-setup uncertainty were calculated. Dependence of range on energy was investigated delivering the same pencil beam pattern but with energy variations in steps of ±0.2MeV for all the nominal energies, up to ±1.0MeV. Possible range uncertainties, caused by setup and positional errors, were then simulated including inclination of the phantom, pencil beam and couch shifts. Intra position setup (based on in-room laser system) shows a maximum in plane difference within 1.5mm. Range reproducibility (standard deviation) was less than 0.14mm. Setup and beam errors did not affect significantly the results, except for a vertical shift of 10mm which leads to an error in the range computation. Taking into account different day-to-day setup and beam errors, day-to-day determination of range has been shown to be reproducible using the proposed system. Copyright © 2018. Published by Elsevier GmbH.

PoSSUM: Polar Suborbital Science in the Upper Mesosphere

Science.gov (United States)

Reimuller, J. D.; Fritts, D. C.; Thomas, G. E.; Taylor, M. J.; Mitchell, S.; Lehmacher, G. A.; Watchorn, S. R.; Baumgarten, G.; Plane, J. M.

2013-12-01

Project PoSSUM (www.projectpossum.org) is a suborbital research project leveraging imaging and remote sensing techniques from Reusable Suborbital Launch Vehicles (rSLVs) to gather critical climate data through use of the PoSSUM Observatory and the PoSSUM Aeronomy Laboratory. An acronym for Polar Suborbital Science in the Upper Mesosphere, PoSSUM grew from the opportunity created by the Noctilucent Cloud Imagery and Tomography Experiment, selected by the NASA Flight Opportunities Program as Experiment 46-S in March 2012. This experiment will employ an rSLV (e.g. the XCOR Lynx Mark II) launched from a high-latitude spaceport (e.g. Eielson AFB, Alaska or Kiruna, Sweden) during a week-long deployment scheduled for July 2015 to address critical questions concerning noctilucent clouds (NLCs) through flights that transition the cloud layer where the clouds will be under direct illumination from the sun. The 2015 Project PoSSUM NLC campaign will use the unique capability of rSLVs to address key under-answered questions pertaining to NLCs. Specifically, PoSSUM will answer: 1) What are the small-scale dynamics of NLCs and what does this tell us about the energy and momentum deposition from the lower atmosphere? 2) What is the seasonal variability of NLCs, mesospheric dynamics, and temperatures? 3) Are structures observed in the OH layer coupled with NLC structures? 4) How do NLCs nucleate? and 5) What is the geometry of NLC particles and how do they stratify? Instrumentation will include video and still-frame visible cameras (PoSSUMCam), infrared cameras, a mesospheric temperatures experiment, a depolarization LiDAR, a mesospheric density and temperatures experiment (MCAT), a mesospheric winds experiment, and a meteoric smoke detector (MASS). The instrument suite used on PoSSUM will mature through subsequent campaigns to develop an integrated, modular laboratory (the ';PoSSUM Observatory') that will provide repeatable, low cost, in-situ NLC and aeronomy observations as well

Camera trap arrays improve detection probability of wildlife: Investigating study design considerations using an empirical dataset.

Science.gov (United States)

O'Connor, Kelly M; Nathan, Lucas R; Liberati, Marjorie R; Tingley, Morgan W; Vokoun, Jason C; Rittenhouse, Tracy A G

2017-01-01

Camera trapping is a standard tool in ecological research and wildlife conservation. Study designs, particularly for small-bodied or cryptic wildlife species often attempt to boost low detection probabilities by using non-random camera placement or baited cameras, which may bias data, or incorrectly estimate detection and occupancy. We investigated the ability of non-baited, multi-camera arrays to increase detection probabilities of wildlife. Study design components were evaluated for their influence on wildlife detectability by iteratively parsing an empirical dataset (1) by different sizes of camera arrays deployed (1-10 cameras), and (2) by total season length (1-365 days). Four species from our dataset that represented a range of body sizes and differing degrees of presumed detectability based on life history traits were investigated: white-tailed deer (Odocoileus virginianus), bobcat (Lynx rufus), raccoon (Procyon lotor), and Virginia opossum (Didelphis virginiana). For all species, increasing from a single camera to a multi-camera array significantly improved detection probability across the range of season lengths and number of study sites evaluated. The use of a two camera array increased survey detection an average of 80% (range 40-128%) from the detection probability of a single camera across the four species. Species that were detected infrequently benefited most from a multiple-camera array, where the addition of up to eight cameras produced significant increases in detectability. However, for species detected at high frequencies, single cameras produced a season-long (i.e, the length of time over which cameras are deployed and actively monitored) detectability greater than 0.75. These results highlight the need for researchers to be critical about camera trap study designs based on their intended target species, as detectability for each focal species responded differently to array size and season length. We suggest that researchers a priori identify

A Matlab based framework for the real-time environment at FTU

International Nuclear Information System (INIS)

Vitale, V.; Iannone, F.; Centioli, C.; Pangione, L.; Zaccarian, L.

2006-01-01

The Feedback Control System running at FTU has been recently ported from a commercial platform (O.S. LynxOS) to an open-source GNU/Linux-RTAI platform, obtaining significant performance and cost improvements. Thanks to the new platform, more user friendly tools can be developed in order to help the designer with new control laws. A relevant goal within this new framework is to provide a high level environment where new control algorithms can be created then simulated and finally released without minding the code implementation issues. The ideal situation would be to have a dedicated framework which provides all the necessary phases from the design to the commissioning of the new software. This framework should simulate the real-time context and make transparent to the user on the one hand all the issues related to the simulation (e.g. experimental data retrieving) and on the other hand all the aspects (platform, operating system, programming language, network, hardware...) related to the actual environment where the new algorithm will be run. In this paper we report on recent developments, based on The MathWorks' Simulink and Real Time Workshop (RTW) packages, aimed at obtaining the above mentioned environment where a new control law can be easily modelled, simulated with the real time constraints and then translated in the appropriate executable format. Using this tool, the control designer only needs to specify the control law in the Simulink graphical environment. The arising model is then automatically translated in C code, integrated with control system code and simulated in real-time using the data from the FTU data base archive. All the necessary steps to adapt the RTW scripts and the control system code to the new simulation/validation environment will be illustrated in this paper. Moreover we will report on some experimental tests where the actual experiment is compared with the simulations provided by the proposed environment. (author)

Flathead River Basin Hydrologic Observatory, Northern Rocky Mountains

Science.gov (United States)

Woessner, W. W.; Running, S. W.; Potts, D. F.; Kimball, J. S.; Deluca, T. H.; Fagre, D. B.; Makepeace, S.; Hendrix, M. S.; Lorang, M. S.; Ellis, B. K.; Lafave, J.; Harper, J.

2004-12-01

We are proposing the 22, 515 km2 glacially-sculpted Flathead River Basin located in Montana and British Columbia as a Hydrologic Observatory. This hydrologic landscape is diverse and includes large pristine watersheds, rapidly developing intermountain valleys, and a 95 km2 regulated reservoir and 510 km2 lake. The basin has a topographic gradient of over 2,339 m, and spans high alpine to arid climatic zones and a range of biomes. Stream flows are snow-melt dominated and underpinned by groundwater baseflow. The site headwaters contain 37 glaciers and thousands of square kilometers of watersheds in which fire and disease are the only disturbances. In contrast, the HO also contains watersheds at multiple scales that were dominated by glaciers within the last 100 years but are now glacier free, impacted by timber harvests and fires of varying ages to varying degrees, modified by water management practices including irrigation diversion and dams, and altered by development for homes, cities and agriculture. This Observatory provides a sensitive monitor of historic and future climatic shifts, air shed influences and impacts, and the consequences of land and water management practices on the hydrologic system. The HO watersheds are some of the only pristine watersheds left in the contiguous U.S.. They provide critical habitat for key species including the native threaten bull trout and lynx, and the listed western cutthroat trout, bald eagle, gray wolf and the grizzly bear. For the last several thousand years this system has been dominated by snow-melt runoff and moderated by large quantities of water stored in glacial ice. However, the timing and magnitude of droughts and summer flows have changed dramatically. With the information that can be gleaned from sediment cores and landscape records at different scales, this HO provides scientists with opportunities to establish baseline watershed conditions and data on natural hydrologic variability within the system. Such a

Quantification and molecular characterization of the feline leukemia virus A receptor.

Science.gov (United States)

Katrin Helfer-Hungerbuehler, A; Cattori, Valentino; Bachler, Barbara; Hartnack, Sonja; Riond, Barbara; Ossent, Pete; Lutz, Hans; Hofmann-Lehmann, Regina

2011-12-01

Virus receptors and their expression patterns on the cell surface determine the cell tropism of the virus, host susceptibility and the pathogenesis of the infection. Feline thiamine transport protein 1 (fTHTR1) has been identified as the receptor for feline leukemia virus (FeLV) A. The goal of the present study was to develop a quantitative, TaqMan real-time PCR assay to investigate fTHTR1 mRNA expression in tissues of uninfected and FeLV-infected cats, cats of different ages, in tumor tissues and leukocyte subsets. Moreover, the receptor was molecularly characterized in different feline species. fTHTR1 mRNA expression was detected in all 30 feline tissues investigated, oral mucosa scrapings and blood. Importantly, identification of significant differences in fTHTR1 expression relied on normalization with an appropriate reference gene. The lowest levels were found in the blood, whereas high levels were measured in the oral mucosa, salivary glands and the musculature. In the blood, T lymphocytes showed significantly higher fTHTR1 mRNA expression levels than neutrophil granulocytes. In vitro activation of peripheral blood mononuclear cells with concanavalin A alone or followed by interleukin-2 led to a transient increase of fTHTR1 mRNA expression. In the blood, but not in the examined tissues, FeLV-infected cats tended to have lower fTHTR1 mRNA levels than uninfected cats. The fTHTR1 mRNA levels were not significantly different between tissues with lymphomas and the corresponding non-neoplastic tissues. fTHTR1 was highly conserved among different feline species (Iberian lynx, Asiatic and Indian lion, European wildcat, jaguarundi, domestic cat). In conclusion, while ubiquitous fTHTR1 mRNA expression corresponded to the broad target tissue range of FeLV, particularly high fTHTR1 levels were found at sites of virus entry and shedding. The differential susceptibility of different species to FeLV could not be attributed to variations in the fTHTR1 sequence. Copyright �

Camera trap arrays improve detection probability of wildlife: Investigating study design considerations using an empirical dataset.

Directory of Open Access Journals (Sweden)

Kelly M O'Connor

Full Text Available Camera trapping is a standard tool in ecological research and wildlife conservation. Study designs, particularly for small-bodied or cryptic wildlife species often attempt to boost low detection probabilities by using non-random camera placement or baited cameras, which may bias data, or incorrectly estimate detection and occupancy. We investigated the ability of non-baited, multi-camera arrays to increase detection probabilities of wildlife. Study design components were evaluated for their influence on wildlife detectability by iteratively parsing an empirical dataset (1 by different sizes of camera arrays deployed (1-10 cameras, and (2 by total season length (1-365 days. Four species from our dataset that represented a range of body sizes and differing degrees of presumed detectability based on life history traits were investigated: white-tailed deer (Odocoileus virginianus, bobcat (Lynx rufus, raccoon (Procyon lotor, and Virginia opossum (Didelphis virginiana. For all species, increasing from a single camera to a multi-camera array significantly improved detection probability across the range of season lengths and number of study sites evaluated. The use of a two camera array increased survey detection an average of 80% (range 40-128% from the detection probability of a single camera across the four species. Species that were detected infrequently benefited most from a multiple-camera array, where the addition of up to eight cameras produced significant increases in detectability. However, for species detected at high frequencies, single cameras produced a season-long (i.e, the length of time over which cameras are deployed and actively monitored detectability greater than 0.75. These results highlight the need for researchers to be critical about camera trap study designs based on their intended target species, as detectability for each focal species responded differently to array size and season length. We suggest that researchers a priori

Molecular identification of Sarcocystis halieti n. sp., Sarcocystis lari and Sarcocystis truncata in the intestine of a white-tailed sea eagle (Haliaeetus albicilla in Norway

Directory of Open Access Journals (Sweden)

Bjørn Gjerde

2018-04-01

Full Text Available An emaciated white-tailed sea eagle (Haliaeetus albicilla from Western Norway was found and nursed briefly before it died. The necropsy revealed that the principal cause of death was an inflammation and occlusion of the bile ducts. A secondary finding was the presence in the intestinal mucosa of numerous sporulated Sarcocystis oocysts measuring 21.8–22.8 × 16.0–17.0 μm. The aim of this study was to identify these oocysts to species level using molecular methods. Genomic DNA was extracted from 10 mucosal scrapings containing oocysts and subjected to PCR amplification and sequencing of four DNA regions: the 18S and 28S rRNA genes, the ITS1 region and the cox1 gene. DNA of three previously known Sarcocystis spp. was identified, but only two of these, Sarcocystis halieti n. sp. and Sarcocystis lari, both employing sea birds as intermediate hosts, were considered to have used the sea eagle as a definitive host and to have formed oocysts in its intestine. The third species found, Sarcocystis truncata, employs red deer as intermediate hosts and seems to use felids as definitive hosts based on its phylogenetic position and prevalence. The sea eagle had probably recently ingested portions of one of the latter hosts (red deer or cat/lynx containing stages (sarcocysts/oocysts and thus DNA of S. truncata. The species S. halieti and S. lari could only be unambiguously separated from their most closely related congeners on the basis of their ITS1 sequences. This is the first report of Sarcocystis oocysts in sea eagles and the first identification to species level of Sarcocystis oocysts in any type of eagle. The sea eagle also acted as intermediate host of an unidentified Sarcocystis spp. as evidenced by the finding of six thin-walled sarcocysts in a histological section of cardiac muscle. Keywords: Sarcocystis, Haliaeetus albicilla, Oocysts, ITS1, Cox1, Phylogeny

Tracking cats: problems with placing feline carnivores on δO, δD isoscapes.

Directory of Open Access Journals (Sweden)

Stephanie J Pietsch

Full Text Available Several felids are endangered and threatened by the illegal wildlife trade. Establishing geographic origin of tissues of endangered species is thus crucial for wildlife crime investigations and effective conservation strategies. As shown in other species, stable isotope analysis of hydrogen and oxygen in hair (δD(h, δ(18O(h can be used as a tool for provenance determination. However, reliably predicting the spatial distribution of δD(h and δ(18O(h requires confirmation from animal tissues of known origin and a detailed understanding of the isotopic routing of dietary nutrients into felid hair.We used coupled δD(h and δ(18O(h measurements from the North American bobcat (Lynx rufus and puma (Puma concolor with precipitation-based assignment isoscapes to test the feasibility of isotopic geo-location of felidae. Hairs of felid and rabbit museum specimens from 75 sites across the United States and Canada were analyzed. Bobcat and puma lacked a significant correlation between H/O isotopes in hair and local waters, and also exhibited an isotopic decoupling of δ(18O(h and δD(h. Conversely, strong δD and δ(18O coupling was found for key prey, eastern cottontail rabbit (Sylvilagus floridanus; hair and white-tailed deer (Odocoileus virginianus; collagen, bone phosphate.Puma and bobcat hairs do not adhere to expected pattern of H and O isotopic variation predicted by precipitation isoscapes for North America. Thus, using bulk hair, felids cannot be placed on δ(18O and δD isoscapes for use in forensic investigations. The effective application of isotopes to trace the provenance of feline carnivores is likely compromised by major controls of their diet, physiology and metabolism on hair δ(18O and δD related to body water budgets. Controlled feeding experiments, combined with single amino acid isotope analysis of diets and hair, are needed to reveal mechanisms and physiological traits explaining why felid hair does not follow isotopic patterns

Weather and Prey Predict Mammals' Visitation to Water.

Directory of Open Access Journals (Sweden)

Grant Harris

Full Text Available Throughout many arid lands of Africa, Australia and the United States, wildlife agencies provide water year-round for increasing game populations and enhancing biodiversity, despite concerns that water provisioning may favor species more dependent on water, increase predation, and reduce biodiversity. In part, understanding the effects of water provisioning requires identifying why and when animals visit water. Employing this information, by matching water provisioning with use by target species, could assist wildlife management objectives while mitigating unintended consequences of year-round watering regimes. Therefore, we examined if weather variables (maximum temperature, relative humidity [RH], vapor pressure deficit [VPD], long and short-term precipitation and predator-prey relationships (i.e., prey presence predicted water visitation by 9 mammals. We modeled visitation as recorded by trail cameras at Sevilleta National Wildlife Refuge, New Mexico, USA (June 2009 to September 2014 using generalized linear modeling. For 3 native ungulates, elk (Cervus Canadensis, mule deer (Odocoileus hemionus, and pronghorn (Antilocapra americana, less long-term precipitation and higher maximum temperatures increased visitation, including RH for mule deer. Less long-term precipitation and higher VPD increased oryx (Oryx gazella and desert cottontail rabbits (Sylvilagus audubonii visitation. Long-term precipitation, with RH or VPD, predicted visitation for black-tailed jackrabbits (Lepus californicus. Standardized model coefficients demonstrated that the amount of long-term precipitation influenced herbivore visitation most. Weather (especially maximum temperature and prey (cottontails and jackrabbits predicted bobcat (Lynx rufus visitation. Mule deer visitation had the largest influence on coyote (Canis latrans visitation. Puma (Puma concolor visitation was solely predicted by prey visitation (elk, mule deer, oryx. Most ungulate visitation peaked during

Weather and Prey Predict Mammals’ Visitation to Water

Science.gov (United States)

Harris, Grant; Sanderson, James G.; Erz, Jon; Lehnen, Sarah E.; Butler, Matthew J.

2015-01-01

Throughout many arid lands of Africa, Australia and the United States, wildlife agencies provide water year-round for increasing game populations and enhancing biodiversity, despite concerns that water provisioning may favor species more dependent on water, increase predation, and reduce biodiversity. In part, understanding the effects of water provisioning requires identifying why and when animals visit water. Employing this information, by matching water provisioning with use by target species, could assist wildlife management objectives while mitigating unintended consequences of year-round watering regimes. Therefore, we examined if weather variables (maximum temperature, relative humidity [RH], vapor pressure deficit [VPD], long and short-term precipitation) and predator-prey relationships (i.e., prey presence) predicted water visitation by 9 mammals. We modeled visitation as recorded by trail cameras at Sevilleta National Wildlife Refuge, New Mexico, USA (June 2009 to September 2014) using generalized linear modeling. For 3 native ungulates, elk (Cervus Canadensis), mule deer (Odocoileus hemionus), and pronghorn (Antilocapra americana), less long-term precipitation and higher maximum temperatures increased visitation, including RH for mule deer. Less long-term precipitation and higher VPD increased oryx (Oryx gazella) and desert cottontail rabbits (Sylvilagus audubonii) visitation. Long-term precipitation, with RH or VPD, predicted visitation for black-tailed jackrabbits (Lepus californicus). Standardized model coefficients demonstrated that the amount of long-term precipitation influenced herbivore visitation most. Weather (especially maximum temperature) and prey (cottontails and jackrabbits) predicted bobcat (Lynx rufus) visitation. Mule deer visitation had the largest influence on coyote (Canis latrans) visitation. Puma (Puma concolor) visitation was solely predicted by prey visitation (elk, mule deer, oryx). Most ungulate visitation peaked during May and

Platelets Proteomic Profiles of Acute Ischemic Stroke Patients.

Directory of Open Access Journals (Sweden)

Ozge Cevik

Full Text Available Platelets play a crucial role in the pathogenesis of stroke and antiplatelet agents exist for its treatment and prevention. Through the use of LC-MS based protein expression profiling, platelets from stroke patients were analyzed and then correlated with the proteomic analyses results in the context of this disease. This study was based on patients who post ischemic stroke were admitted to hospital and had venous blood drawn within 24 hrs of the incidence. Label-free protein expression analyses of the platelets' tryptic digest was performed in triplicate on a UPLC-ESI-qTOF-MS/MS system and ProteinLynx Global Server (v2.5, Waters was used for tandem mass data extraction. The peptide sequences were searched against the reviewed homo sapiens database (www.uniprot.org and the quantitation of protein variation was achieved through Progenesis LC-MS software (V4.0, Nonlinear Dynamics. These Label-free differential proteomics analysis of platelets ensured that 500 proteins were identified and 83 of these proteins were found to be statistically significant. The differentially expressed proteins are involved in various processes such as inflammatory response, cellular movement, immune cell trafficking, cell-to-cell signaling and interaction, hematological system development and function and nucleic acid metabolism. The expressions of myeloperoxidase, arachidonate 12-Lipoxygenase and histidine-rich glycoprotein are involved in cellular metabolic processes, crk-like protein and ras homolog gene family member A involved in cell signaling with vitronectin, thrombospondin 1, Integrin alpha 2b, and integrin beta 3 involved in cell adhesion. Apolipoprotein H, immunoglobulin heavy constant gamma 1 and immunoglobulin heavy constant gamma 3 are involved in structural, apolipoprotein A-I, and alpha-1-microglobulin/bikunin precursor is involved in transport, complement component 3 and clusterin is involved in immunity proteins as has been discussed. Our data provides

Greater sage-grouse nest predators in the Virginia Mountains of northwestern Nevada

Science.gov (United States)

Lockyer, Zachary B.; Coates, Peter S.; Casazza, Michael L.; Espinosa, Shawn; Delehanty, David J.

2013-01-01

Greater sage-grouse Centrocercus urophasianus, hereafter sage-grouse, populations have declined across their range due to the loss, degradation, and fragmentation of habitat. Habitat alterations can lead not only to vegetative changes but also to shifts in animal behavior and predator composition that may influence population vital rates, such as nest success. For example, common ravens Corvus corax are sage-grouse nest predators, and common raven abundance is positively associated with human-caused habitat alterations. Because nest success is a central component to sage-grouse population persistence, research that identifies factors influencing nest success will better inform conservation efforts. We used videography to unequivocally identify sage-grouse nest predators within the Virginia Mountains of northwestern Nevada, USA, from 2009 to 2011 and used maximum likelihood to calculate daily probability of nest survival. In the Virginia Mountains, fires, energy exploration, and other anthropogenic activities have altered historic sage-grouse habitat. We monitored 71 sage-grouse nests during the study, placing video cameras at 39 nests. Cumulative nest survival for all nests was 22.4% (95% CI, 13.0–33.4%), a survival rate that was significantly lower than other published results for sage-grouse in the Great Basin. Depredation was the primary cause for nest failure in our study (82.5%), and common ravens were the most frequent sage-grouse nest predator, accounting for 46.7% of nest depredations. We also successfully documented a suite of mammalian and reptilian species depredating sage-grouse nests, including some predators never previously confirmed in the literature to be sage-grouse nest predators (i.e., bobcats Lynx rufus and long-tailed weasels Mephitis frenata). Within the high elevation, disturbed habitat of the Virginia Mountains, low sage-grouse nest success may be limiting sage-grouse population growth. These results suggest that management actions that

Transvaginal retropubic sling systems: efficacy and patient acceptability

Directory of Open Access Journals (Sweden)

Moldovan CP

2015-02-01

Full Text Available Christina P Moldovan,1 Michelle E Marinone,2 Andrea Staack3 1Department of Psychology, Loma Linda University, Loma Linda, California, United States of America; 2School of Medicine, Loma Linda University, Loma Linda, California, United States of America; 3Department of Urology, Loma Linda University Medical Center, Loma Linda, California, United States of America Abstract: Stress urinary incontinence is a common, disabling, and costly medical problem that affects approximately 50% of women with urinary incontinence. Suburethral retropubic slings have been developed as a minimally invasive and effective surgical option, and they have been used as a first-line treatment for stress urinary incontinence since 1995. However, complications including vaginal extrusion, erosion, pain, bleeding, infections, lower urinary tract symptoms, urinary retention, and incontinence have been reported with use of the slings. Several companies manufacture sling kits, and the sling kits vary with regard to the composition of the mesh and introducer needle. The aim of this review was to determine which sling kit was most effective for patients, had minimal reported side effects, and was best accepted by patients and surgeons. In a review of the literature, it was found that a total of 38 studies were published between 1995 and 2014 that reported on eight tension-free retropubic sling kits: SPARC, RetroArc, Align, Advantage, Lynx, Desara, Supris, and Gynecare TVT. The Gynecare TVT was the most cited sling kit; the second most cited was the SPARC. This review provides a summary of the studies that have examined positive and negative outcomes of the retropubic tension-free suburethral sling procedure using various sling kits. Overall, the results of the literature review indicated that data from comparisons of the available sling kits are insufficient to make an evidenced-based recommendation. Therefore, the decision regarding which sling kit is appropriate to use in

Comparative sacral morphology and the reconstructed tail lengths of five extinct primates: Proconsul heseloni, Epipliopithecus vindobonensis, Archaeolemur edwardsi, Megaladapis grandidieri, and Palaeopropithecus kelyus.

Science.gov (United States)

Russo, Gabrielle A

2016-01-01

This study evaluated the relationship between the morphology of the sacrum-the sole bony link between the tail or coccyx and the rest of the body-and tail length (including presence/absence) and function using a comparative sample of extant mammals spanning six orders (Primates, Carnivora, Rodentia, Diprotodontia, Pilosa, Scandentia; N = 472). Phylogenetically-informed regression methods were used to assess how tail length varied with respect to 11 external and internal (i.e., trabecular) bony sacral variables with known or suspected biomechanical significance across all mammals, only primates, and only non-primates. Sacral variables were also evaluated for primates assigned to tail categories ('tailless,' 'nonprehensile short-tailed,' 'nonprehensile long-tailed,' and 'prehensile-tailed'). Compared to primates with reduced tail lengths, primates with longer tails generally exhibited sacra having larger caudal neural openings than cranial neural openings, and last sacral vertebrae with more mediolaterally-expanded caudal articular surfaces than cranial articular surfaces, more laterally-expanded transverse processes, more dorsally-projecting spinous processes, and larger caudal articular surface areas. Observations were corroborated by the comparative sample, which showed that shorter-tailed (e.g., Lynx rufus [bobcat]) and longer-tailed (e.g., Acinonyx jubatus [cheetah]) non-primate mammals morphologically converge with shorter-tailed (e.g., Macaca nemestrina) and longer-tailed (e.g., Macaca fascicularis) primates, respectively. 'Prehensile-tailed' primates exhibited last sacral vertebrae with more laterally-expanded transverse processes and greater caudal articular surface areas than 'nonprehensile long-tailed' primates. Internal sacral variables performed poorly compared to external sacral variables in analyses of extant primates, and were thus deemed less useful for making inferences concerning tail length and function in extinct primates. The tails lengths of

Characterization of Canberra's Tomographic Gamma-Ray Can Scanner ('Can-TGS') - 13311

Energy Technology Data Exchange (ETDEWEB)

LeBlanc, P.J.; Lagana, J.; Kirkpatrick, J.; Nakazawa, D.; Smith, S. Kane; Venkataraman, R.; Villani, M.; Young, B.M. [Canberra Industries, 800 Research Parkway, Meriden, CT 06450 (United States)

2013-07-01

The Tomographic Gamma-ray Scanner (TGS) for large volume drummed waste has been successfully commercialized by Canberra over the last several years. As part of an R and D effort to continually improve this technology, we have developed a scaled down version of the standard commercial product (Can-TGS). The Can-TGS is able to accommodate cans and pails of various sizes, ranging from sub-liter to 20 liter volumes with densities of up to 4 g/cc. The Can-TGS has three diamond-shaped collimators (6.35 mm [0.25''], 12.7 mm [0.5''], and 25.4 mm [1'']) to facilitate a range of container volumes and heights. As with the standard TGS, the Can-TGS has a transmission source sub-system, where the transmission source can be easily swapped between sources of various strengths and type. The acquisition portion of the Can-TGS is powered by the Canberra Lynx{sup R} MCA which accommodates both multi-spectral scaling (MSS) and list-mode. Recently, the Can-TGS has been successfully characterized for an 18.93 L [5-gallon] container for the 25.4 mm diamond-shaped collimator. In principle, a single measurement (with good statistics) is required for each configuration in order to characterize the system. However, for this study, measurements were performed for several different matrices. For each matrix used, 6 different measurements were acquired. For each of these measurements, the drum was rotated 60 deg. with respect to the previous starting position. This procedure was followed in order to average out any radial bias that might be produced from just a single measurement. A description of the Can-TGS system is given. The details of the recent characterization measurements and the associated data analysis and results are presented. TGS results are compared with Segmented Gamma Scanner (SGS) results for the same source configuration. Additionally, the future outlook for Canberra's R and D efforts with this system is discussed. These efforts include TGS

Pathogen exposure varies widely among sympatric populations of wild and domestic felids across the United States.

Science.gov (United States)

Carver, Scott; Bevins, Sarah N; Lappin, Michael R; Boydston, Erin E; Lyren, Lisa M; Alldredge, Mathew; Logan, Kenneth A; Sweanor, Linda L; Riley, Seth P D; Serieys, Laurel E K; Fisher, Robert N; Vickers, T Winston; Boyce, Walter; Mcbride, Roy; Cunningham, Mark C; Jennings, Megan; Lewis, Jesse; Lunn, Tamika; Crooks, Kevin R; Vandewoude, Sue

2016-03-01

Understanding how landscape, host, and pathogen traits contribute to disease exposure requires systematic evaluations of pathogens within and among host species and geographic regions. The relative importance of these attributes is critical for management of wildlife and mitigating domestic animal and human disease, particularly given rapid ecological changes, such as urbanization. We screened > 1000 samples from sympatric populations of puma (Puma concolor), bobcat (Lynx rufus), and domestic cat (Felis catus) across urban gradients in six sites, representing three regions, in North America for exposure to a representative suite of bacterial, protozoal, and viral pathogens (Bartonella sp., Toxoplasma gondii, feline herpesvirus-1, feline panleukopenea virus, feline calicivirus, and feline immunodeficiency virus). We evaluated prevalence within each species, and examined host trait and land cover determinants of exposure; providing an unprecedented analysis of factors relating to potential for infections in domesticated and wild felids. Prevalence differed among host species (highest for puma and lowest for domestic cat) and was greater for indirectly transmitted pathogens. Sex was inconsistently predictive of exposure to directly transmitted pathogens only, and age infrequently predictive of both direct and indirectly transmitted pathogens. Determinants of pathogen exposure were widely divergent between the wild felid species. For puma, suburban land use predicted increased exposure to Bartonella sp. in southern California, and FHV-1 exposure increased near urban edges in Florida. This may suggest interspecific transmission with domestic cats via flea vectors (California) and direct contact (Florida) around urban boundaries. Bobcats captured near urban areas had increased exposure to T. gondii in Florida, suggesting an urban source of prey Bobcats captured near urban areas in Colorado and Florida had higher FIV exposure, possibly suggesting increased intraspecific

Behavioral profiles of the captive juvenile whooping crane (Grus americana) as an indicator of reintroduction behavior and survival

Science.gov (United States)

Kreger, M.D.

2003-01-01

Predation by bobcats (Lynx rufus) has been the greatest cause of mortality of whooping cranes (Grus americana) in the reintroduced population in Florida. This study investigated whether the behavior of juvenile cranes during captive rearing and shortly after release can be used to predict their chances of survival once released in the wild. This study also examined differences in behavior based on rearing treatments and whether differences observed during rearing continued at the release site. Experimental rearing treatments were parent reared (PR), hand reared (RR), and hand reared with exercise (HRE). Two annual cycles of cranes were observed from hatch to 20 weeks of age in captivity (n=56 birds). Post-release bebavioral data were collected at the release site for a minimum of two weeks (n=34 birds), with mortality data collected up to one year post release (n=38 birds). Behavioral time budgets were compared using repeated measures ANOVA. Logistic regression was used to build a model to identify behaviors that were associated with first-year survival. During rearing, PR birds were the most vigilant. There were no behavioral differences between HR and HRE birds. Generally, rearing treatments had few long-term effects on the post-release behavior of the birds. The main behavioral differences during rearing and after release were the frequency of bouts and the percentage of time spent performing different behaviors. This may be attributed to foraging strategies and adaptation from captive conditions to the wild. Survival was not related to rearing treatment. Fifty-five percent of the birds survived the first year post-release based upon data pooled over two years. During rearing, the frequency of foraging bouts was positively correlated to survival. Survival was negatively correlated to the frequency of walking bouts during rearing, and release weight of the birds. These correlations accounted for 32 percent of the variability in survival. At the release site, 20

Medium-Sized Mammals around a Radioactive Liquid Waste Lagoon at Los Alamos National Laboratory: Uptake of Contaminants and Evaluation of Radio-Frequency Identification Technology

Energy Technology Data Exchange (ETDEWEB)

Leslie A. Hansen; Phil R. Fresquez; Rhonda J. Robinson; John D. Huchton; Teralene S. Foxx

1999-11-01

Use of a radioactive liquid waste lagoon by medium-sized mammals and levels of tritium, other selected radionuclides, and metals in biological tissues of the animals were documented at Technical Area 53 (TA-53) of Los Alamos National Laboratory during 1997 and 1998. Rock squirrel (Spermophilus variegates), raccoon (Procyon lotor), striped skunk (Mephitis mephitis), and bobcat (Lynx rufus) were captured at TA-53 and at a control site on the Santa Fe National Forest. Captured animals were anesthetized and marked with radio-frequency identification (RFD) tags and/or ear tags. We collected urine and hair samples for tritium and metals (aluminum, antimony, arsenic, barium, beryllium, cadmium, chromium, copper, lead, mercury, nickel, selenium, silver, and thallium) analyses, respectively. In addition, muscle and bone samples from two rock squirrels collected from each of TA-53, perimeter, and regional background sites were tested for tritium, {sup 137}Cs, {sup 90}Sr, {sup 238}Pu, {sup 239,240}Pu, {sup 241}Am, and total uranium. Animals at TA-53 were monitored entering and leaving the lagoon area using a RFID monitor to read identification numbers from the RFID tags of marked animals and a separate camera system to photograph all animals passing through the monitor. Cottontail rabbit (Sylvilagus spp.), rock squirrel, and raccoon were the species most frequently photographed going through the RFID monitor. Less than half of all marked animals in the lagoon area were detected using the lagoon. Male and female rock squirrels from the lagoon area had significantly higher tritium concentrations compared to rock squirrels from the control area. Metals tested were not significantly higher in rock squirrels from TA-53, although there was a trend toward increased levels of lead in some individuals at TA-53. Muscle and bone samples from squirrels in the lagoon area appeared to have higher levels of tritium, total uranium, and {sup 137}Cs than samples collected from perimeter and

Using Real Time Workshop for rapid and reliable control implementation in the Frascati Tokamak Upgrade Feedback Control System running under RTAI-GNU/Linux

International Nuclear Information System (INIS)

Centioli, C.; Iannone, F.; Ledauphin, M.; Panella, M.; Pangione, L.; Podda, S.; Vitale, V.; Zaccarian, L.

2005-01-01

The Feedback Control System running at FTU has been recently ported from a commercial platform (based on LynxOS) to an open-source GNU/Linux-based RTAI-LXRT platform, thereby, obtaining significant performance and cost improvements. Based on the new open-source platform, it is now possible to experiment novel control strategies aimed at improving the robustness and accuracy of the feedback control. Nevertheless, the implementation of control ideas still requires a great deal of coding of the control algorithms that, if carried out manually, may be prone to coding errors, therefore time consuming both in the development phase and in the subsequent validation tests consisting of dedicated experiments carried out on FTU. In this paper, we report on recent developments based on Mathworks' Simulink and Real Time Workshop (RTW) packages to obtain a user-friendly environment where the real time code implementing novel control algorithms can be easily generated, tested and validated. Thanks to this new tool, the control designer only needs to specify the block diagram of the control task (namely, a high level and functional description of the new algorithm under consideration) and the corresponding real time code generation and testing is completely automated without any need of dedicated experiments. In the paper, the necessary work carried out to adapt the Real Time Workshop to our RTAI-LXRT context will be illustrated. A necessary re-organization of the previous real time software, aimed at incorporating the code coming from the adapted RTW, will also be discussed. Moreover, we will report on a performance comparison between the code obtained using the automated RTW-based procedure and the hand-written C code, appropriately optimised; at the moment, a preliminary performance comparison consisting of dummy algorithms has shown that the code automatically generated from RTW is faster (about 30% up) than the manually written one. This preliminary result combined with the

A Mobile Automated Tomographic Gamma Scanning System - 13231

Energy Technology Data Exchange (ETDEWEB)

Kirkpatrick, J.M.; LeBlanc, P.J.; Nakazawa, D.; Petroka, D.L.; Kane Smith, S.; Venkataraman, R.; Villani, M. [Canberra Industries, Inc. 800 Research Parkway, Meriden CT 06450 (United States)

2013-07-01

Canberra Industries have recently designed and built a new automated Tomographic Gamma Scanning (TGS) system for mobile deployment. The TGS technique combines high-resolution gamma spectroscopy with low spatial resolution 3-dimensional image reconstruction to provide increased accuracy over traditional approaches for the assay of non-uniform source distributions in low-to medium-density, non-heterogeneous matrices. Originally pioneered by R. Estep at Los Alamos National Laboratory (LANL), the TGS method has been further developed and commercialized by Canberra Industries in recent years. The present system advances the state of the art on several fronts: it is designed to be housed in a standard cargo transport container for ease of transport, allowing waste characterization at multiple facilities under the purview of a single operator. Conveyor feed, drum rotator, and detector and collimator positioning mechanisms operated by programmable logic control (PLC) allow automated batch mode operation. The variable geometry settings can accommodate a wide range of waste packaging, including but not limited to standard 220 liter drums, 380 liter overpack drums, and smaller 20 liter cans. A 20 mCi Eu-152 transmission source provides attenuation corrections for drum matrices up to 1 g/cm{sup 3} in TGS mode; the system can be operated in Segmented Gamma Scanning (SGS) mode to measure higher density drums. To support TGS assays at higher densities, the source shield is sufficient to house an alternate Co-60 transmission source of higher activity, up to 250 mCi. An automated shutter and attenuator assembly is provided for operating the system with a dual intensity transmission source. The system's 1500 kg capacity rotator turntable can handle heavy containers such as concrete lined 380 liter overpack drums. Finally, data acquisition utilizes Canberra's Broad Energy Germanium (BEGE) detector and Lynx MCA, with 32 k channels, providing better than 0.1 ke

Temporal, geomagnetic and related attributes of kimberlite magmatism at Ekati, Northwest Territories, Canada

Science.gov (United States)

Lockhart, Grant; Grütter, Herman; Carlson, Jon

2004-09-01

This paper outlines the development of a multi-disciplinary strategy to focus exploration for economic kimberlites on the Ekati property. High-resolution aeromagnetic data provide an over-arching spatial and magnetostratigraphic framework for exploration and kimberlite discovery at Ekati, and hence also for this investigation. The temporal, geomagnetic, spatial and related attributes of kimberlites with variable diamond content have been constrained by judiciously augmenting the information gathered during routine exploration with detailed, laboratory-based or field-based investigations. The natural remanent magnetisation of 36 Ekati kimberlites has been correlated with their age as determined by isotopic dating techniques, and placed in the context of a well-constrained geomagnetic polarity timescale. Kimberlite magmatism occurred over the period 75 to 45 Ma, in at least five temporally discrete intrusive episodes. Based on current evidence, the older kimberlites (75 to 59 Ma) have low diamond contents and are distributed throughout the property. Younger kimberlites (56 to 45 Ma) have moderate to high diamond contents and occur in three distinct intrusive corridors with NNE to NE orientations. Economic kimberlite pipes erupted at 55.4±0.4 Ma along the A154-Lynx intrusive corridor, which is 7 km wide and oriented at 015°, and at 53.2±0.3 Ma along the Panda intrusive corridor, which is 1 km wide and oriented at 038°. The intrusion ages straddle a paleopole reversal at Chron C24n, consistent with the observation that the older economic kimberlites present as aeromagnetic "low" anomalies while the younger economic pipes are characterised as aeromagnetic "highs". The aeromagnetic responses for these kimberlites are generally muted because they contain volcaniclastic rock types with low magnetic susceptibility. Kimberlites throughout the Ekati property carry a primary natural magnetic remanence (NRM) vector in Ti-bearing groundmass magnetite, and it dominates over

Use of quadrupole time-of-flight mass spectrometry to determine proposed structures of transformation products of the herbicide bromacil after water chlorination.

Science.gov (United States)

Ibáñez, María; Sancho, Juan V; Pozo, Oscar J; Hernández, Félix

2011-10-30

structures of the TPs found. For those compounds that displayed poor fragmentation, product ion scan (MS/MS) experiments were also performed. On processing the data with specialized software (MetaboLynx), four bromacil TPs were detected and their structures were elucidated. To our knowledge, two of them had not previously been reported. Copyright © 2011 John Wiley & Sons, Ltd.

NASA Program Office Technology Investments to Enable Future Missions

Science.gov (United States)

Thronson, Harley; Pham, Thai; Ganel, Opher

2018-01-01

The Cosmic Origins (COR) and Physics of the Cosmos (PCOS) Program Offices (POs) reside at NASA GSFC and implement priorities for the NASA HQ Astrophysics Division (APD). One major aspect of the POs’ activities is managing our Strategic Astrophysics Technology (SAT) program to mature technologies for future strategic missions. The Programs follow APD guidance on which missions are strategic, currently informed by the NRC’s 2010 Decadal Survey report, as well as APD’s Implementation Plan and the Astrophysics Roadmap.In preparation for the upcoming 2020 Decadal Survey, the APD has established Science and Technology Definition Teams (STDTs) to study four large-mission concepts: the Origins Space Telescope (née, Far-IR Surveyor), Habitable Exoplanet Imaging Mission, Large UV/Optical/IR Surveyor, and Lynx (née, X-ray Surveyor). The STDTs will develop the science case and design reference mission, assess technology development needs, and estimate the cost of their concept. A fifth team, the L3 Study Team (L3ST), was charged to study potential US contributions to ESA’s planned Laser Interferometer Space Antenna (LISA) gravitational-wave observatory.The POs use a rigorous and transparent process to solicit technology gaps from the scientific and technical communities, and prioritize those entries based on strategic alignment, expected impact, cross-cutting applicability, and urgency. For the past two years, the technology-gap assessments of the four STDTs and the L3ST are included in our process. Until a study team submits its final report, community-proposed changes to gaps submitted or adopted by a study team are forwarded to that study team for consideration.We discuss our technology development process, with strategic prioritization informing calls for SAT proposals and informing investment decisions. We also present results of the 2017 technology gap prioritization and showcase our current portfolio of technology development projects. To date, 96 COR and 86

A Digital Motion Control System for Large Telescopes

Science.gov (United States)

Hunter, T. R.; Wilson, R. W.; Kimberk, R.; Leiker, P. S.

2001-05-01

We have designed and programmed a digital motion control system for large telescopes, in particular, the 6-meter antennas of the Submillimeter Array on Mauna Kea. The system consists of a single robust, high-reliability microcontroller board which implements a two-axis velocity servo while monitoring and responding to critical safety parameters. Excellent tracking performance has been achieved with this system (0.3 arcsecond RMS at sidereal rate). The 24x24 centimeter four-layer printed circuit board contains a multitude of hardware devices: 40 digital inputs (for limit switches and fault indicators), 32 digital outputs (to enable/disable motor amplifiers and brakes), a quad 22-bit ADC (to read the motor tachometers), four 16-bit DACs (that provide torque signals to the motor amplifiers), a 32-LED status panel, a serial port to the LynxOS PowerPC antenna computer (RS422/460kbps), a serial port to the Palm Vx handpaddle (RS232/115kbps), and serial links to the low-resolution absolute encoders on the azimuth and elevation axes. Each section of the board employs independent ground planes and power supplies, with optical isolation on all I/O channels. The processor is an Intel 80C196KC 16-bit microcontroller running at 20MHz on an 8-bit bus. This processor executes an interrupt-driven, scheduler-based software system written in C and assembled into an EPROM with user-accessible variables stored in NVSRAM. Under normal operation, velocity update requests arrive at 100Hz from the position-loop servo process running independently on the antenna computer. A variety of telescope safety checks are performed at 279Hz including routine servicing of a 6 millisecond watchdog timer. Additional ADCs onboard the microcontroller monitor the winding temperature and current in the brushless three-phase drive motors. The PID servo gains can be dynamically changed in software. Calibration factors and software filters can be applied to the tachometer readings prior to the application of

Pathogen exposure varies widely among sympatric populations of wild and domestic felids across the United States

Science.gov (United States)

Carver, Scott; Bevins, Sarah N.; Lappin, Michael R.; Boydston, Erin E.; Lyren, Lisa M.; Alldredge, Mathew W.; Logan, Kenneth A.; Sweanor, Linda L.; Riley, Seth P.D.; Serieys, Laurel E.K.; Fisher, Robert N.; Vickers, T. Winston; Boyce, Walter M.; McBride, Roy; Cunnigham, Mark C.; Jennings, Megan; Lewis, Jesse S.; Lunn, Tamika; Crooks, Kevin R.; VandeWoude, Sue

2016-01-01

Understanding how landscape, host, and pathogen traits contribute to disease exposure requires systematic evaluations of pathogens within and among host species and geographic regions. The relative importance of these attributes is critical for management of wildlife and mitigating domestic animal and human disease, particularly given rapid ecological changes, such as urbanization. We screened >1,000 samples from sympatric populations of puma (Puma concolor), bobcat (Lynx rufus) and domestic cat (Felis catus) across urban gradients in six sites, representing three regions, in North America for exposure to a representative suite of bacterial, protozoal and viral pathogens (Bartonella sp., Toxoplasma gondii, feline herpesvirus-1, feline panleukopenea virus, feline calicivirus, feline immunodeficiency virus). We evaluated prevalence within each species, and examined host trait and land cover determinants of exposure-providing an unprecedented analysis of factors relating to potential for infections in domesticated and wild felids. Prevalence differed among host species (highest for puma and lowest for domestic cat) and was greater for indirectly transmitted pathogens. Sex was inconsistently predictive of exposure to directly transmitted pathogens only, and age infrequently predictive of both direct and indirectly transmitted pathogens. Determinants of pathogen exposure were widely divergent between the wild felid species. For puma, suburban landuse predicted increased exposure to Bartonella sp. in southern California, and FHV-1 exposure increased near urban edges in Florida. This may suggest inter-specific transmission with domestic cats via flea vectors (California) and direct contact (Florida) around urban boundaries. Bobcats captured near urban areas had increased exposure to T. gondii in Florida, suggesting an urban source of prey. Bobcats captured near urban areas in Colorado and Florida had higher FIV exposure, possibly suggesting increased intra

Are pumas subordinate carnivores, and does it matter?

Directory of Open Access Journals (Sweden)

L. Mark Elbroch

2018-01-01

Full Text Available Background Interspecific competition affects species fitness, community assemblages and structure, and the geographic distributions of species. Established dominance hierarchies among species mitigate the need for fighting and contribute to the realized niche for subordinate species. This is especially important for apex predators, many of which simultaneous contend with the costs of competition with more dominant species and the costs associated with human hunting and lethal management. Methods Pumas are a widespread solitary felid heavily regulated through hunting to reduce conflicts with livestock and people. Across their range, pumas overlap with six apex predators (gray wolf, grizzly bear, American black bear, jaguar, coyote, maned wolf, two of which (gray wolf, grizzly bear are currently expanding in North America following recovery efforts. We conducted a literature search to assess whether pumas were subordinate or dominant with sympatric apex predators, as well as with three felid mesocarnivores with similar ecology (ocelot, bobcat, Canada lynx. We also conducted an analysis of the spatial distributions of pumas and their dominant sympatric competitors to estimate in what part of their range, pumas are dominant versus subordinate. Results We used 64 sources to assess dominance among pumas and other apex predators, and 13 sources to assess their relationships with felid mesocarnivores. Evidence suggested that wolves, grizzly bears, black bears, and jaguars are dominant over pumas, but that pumas are dominant over coyotes and maned wolves. Evidence suggested that pumas are also dominant over all three felid mesocarnivores with which they share range. More broadly, pumas are subordinate to at least one other apex carnivore in 10,799,252 (47.5% of their 22,735,268 km2 range across North and South America. Discussion Subordinate pumas change their habitat use, suffer displacement at food sources, likely experience increased energetic demands

Are pumas subordinate carnivores, and does it matter?

Science.gov (United States)

Elbroch, L Mark; Kusler, Anna

2018-01-01

Interspecific competition affects species fitness, community assemblages and structure, and the geographic distributions of species. Established dominance hierarchies among species mitigate the need for fighting and contribute to the realized niche for subordinate species. This is especially important for apex predators, many of which simultaneous contend with the costs of competition with more dominant species and the costs associated with human hunting and lethal management. Pumas are a widespread solitary felid heavily regulated through hunting to reduce conflicts with livestock and people. Across their range, pumas overlap with six apex predators (gray wolf, grizzly bear, American black bear, jaguar, coyote, maned wolf), two of which (gray wolf, grizzly bear) are currently expanding in North America following recovery efforts. We conducted a literature search to assess whether pumas were subordinate or dominant with sympatric apex predators, as well as with three felid mesocarnivores with similar ecology (ocelot, bobcat, Canada lynx). We also conducted an analysis of the spatial distributions of pumas and their dominant sympatric competitors to estimate in what part of their range, pumas are dominant versus subordinate. We used 64 sources to assess dominance among pumas and other apex predators, and 13 sources to assess their relationships with felid mesocarnivores. Evidence suggested that wolves, grizzly bears, black bears, and jaguars are dominant over pumas, but that pumas are dominant over coyotes and maned wolves. Evidence suggested that pumas are also dominant over all three felid mesocarnivores with which they share range. More broadly, pumas are subordinate to at least one other apex carnivore in 10,799,252 (47.5%) of their 22,735,268 km 2 range across North and South America. Subordinate pumas change their habitat use, suffer displacement at food sources, likely experience increased energetic demands from harassment, exhibit increased starvation, and

Seroepidemiology of Toxoplasma gondii in zoo animals in selected zoos in the midwestern United States.

Science.gov (United States)

de Camps, Silvia; Dubey, J P; Saville, W J A

2008-06-01

Toxoplasma gondii infections in zoo animals are of interest because many captive animals die of clinical toxoplasmosis and because of the potential risk of exposure of children and elderly to T. gondii oocysts excreted by cats in the zoos. Seroprevalence of T. gondii antibodies in wild zoo felids, highly susceptible zoo species, and feral cats from 8 zoos of the midwestern United States was determined by using the modified agglutination test (MAT). A titer of 1:25 was considered indicative of T. gondii exposure. Among wild felids, antibodies to T. gondii were found in 6 (27.3%) of 22 cheetahs (Acynonyx jubatus jubatus), 2 of 4 African lynx (Caracal caracal), 1 of 7 clouded leopards (Neofelis nebulosa), 1 of 5 Pallas cats (Otocolobus manul), 12 (54.5%) of 22 African lions (Panthera leo), 1 of 1 jaguar (Panthera onca), 1 of 1 Amur leopard (Panthera pardus orientalis), 1 of 1 Persian leopard (Panthera pardus saxicolor), 5 (27.8%) of 18 Amur tigers (Panthera tigris altaica), 1 of 4 fishing cats (Prionailurus viverrinus), 3 of 6 pumas (Puma concolor), 2 of 2 Texas pumas (Puma concolor stanleyana), and 5 (35.7%) of 14 snow leopards (Uncia uncia). Antibodies were found in 10 of 34 feral domestic cats (Felis domesticus) trapped in 3 zoos. Toxoplasma gondii oocysts were not found in any of the 78 fecal samples from wild and domestic cats. Among the macropods, antibodies were detected in 1 of 3 Dama wallabies (Macropus eugenii), 1 of 1 western grey kangaroo (Macropus fuliginosus), 1 of 2 wallaroos (Macropus robustus), 6 of 8 Bennett's wallabies (Macropus rufogriseus), 21 (61.8%) of 34 red kangaroos (Macropus rufus), and 1 of 1 dusky pademelon (Thylogale brunii). Among prosimians, antibodies were detected in 1 of 3 blue-eyed black lemurs (Eulemur macaco flavifrons), 1 of 21 ring-tailed lemurs (Lemur catta), 2 of 9 red-ruffed lemurs (Varecia variegata rubra), and 2 of 4 black- and white-ruffed lemurs (Varecia variegata variegata). Among the avian species tested, 2 of 3 bald

ARQUEOFAUNA DEL SITIO ARQUEOLÓGICO EL PIÑÓN, CULTURA BOLAÑOS, JALISCO, MÉXICO/Archaeofauna of the archaeological site “El Piñón”, Cultura Bolaños, Jalisco, México.

Directory of Open Access Journals (Sweden)

Bernardo Rodríguez Galicia

2012-11-01

presented. Corresponding interpretations allowed to reconstruct the natural and cultural environment. The identified fauna consisted, in a preliminary analysis, consists of 3333 specimens. More than 250 individuals were identified from cremated, burnt or worked bone and teeth, including: rabbit, hears, squirrel, mole, dog, mountain lion, lynx, peccary, deer, turkey, duck, quail, green macaw, among other vertebrates that are common in the semidry-mild weather that prevails in the Zacatecas-Jalisco region.

Feline Immunodeficiency Virus Cross-Species Transmission: Implications for Emergence of New Lentiviral Infections.

Science.gov (United States)

Lee, Justin; Malmberg, Jennifer L; Wood, Britta A; Hladky, Sahaja; Troyer, Ryan; Roelke, Melody; Cunningham, Mark; McBride, Roy; Vickers, Winston; Boyce, Walter; Boydston, Erin; Serieys, Laurel; Riley, Seth; Crooks, Kevin; VandeWoude, Sue

2017-03-01

Owing to a complex history of host-parasite coevolution, lentiviruses exhibit a high degree of species specificity. Given the well-documented viral archeology of human immunodeficiency virus (HIV) emergence following human exposures to simian immunodeficiency virus (SIV), an understanding of processes that promote successful cross-species lentiviral transmissions is highly relevant. We previously reported natural cross-species transmission of a subtype of feline immunodeficiency virus, puma lentivirus A (PLVA), between bobcats ( Lynx rufus ) and mountain lions ( Puma concolor ) for a small number of animals in California and Florida. In this study, we investigate host-specific selection pressures, within-host viral fitness, and inter- versus intraspecies transmission patterns among a larger collection of PLV isolates from free-ranging bobcats and mountain lions. Analyses of proviral and viral RNA levels demonstrate that PLVA fitness is severely restricted in mountain lions compared to that in bobcats. We document evidence of diversifying selection in three of six PLVA genomes from mountain lions, but we did not detect selection among 20 PLVA isolates from bobcats. These findings support the hypothesis that PLVA is a bobcat-adapted virus which is less fit in mountain lions and under intense selection pressure in the novel host. Ancestral reconstruction of transmission events reveals that intraspecific PLVA transmission has occurred among panthers ( Puma concolor coryi ) in Florida following the initial cross-species infection from bobcats. In contrast, interspecific transmission from bobcats to mountain lions predominates in California. These findings document outcomes of cross-species lentiviral transmission events among felids that compare to the emergence of HIV from nonhuman primates. IMPORTANCE Cross-species transmission episodes can be singular, dead-end events or can result in viral replication and spread in the new species. The factors that determine which

Core component integration tests for the back-end software sub-system in the ATLAS data acquisition and event filter prototype -1 project

International Nuclear Information System (INIS)

Badescu, E.; Caprini, M.; Niculescu, M.; Radu, A.

2000-01-01

described in the database; - marshalling the hierarchy of RC controllers through different states (initialized → loaded → configured → running → configured → running → configured → loaded → initialized); - stopping configuration specific processes via DAQ supervisor; - stopping the back-end server processes. Tests have been done for distributed nxm configurations, were n is the number of read-out crates and m the number of sub-farm crates. For all the tests the back-end communication server processes, DAQ supervisor and RC root controller were always started on the same workstation (i.e. the host on which the benchmark script was launched). The other processes (PMG agent, local DAQ emulator and corresponding RC controller) were started on separate PCs running Linux, or VME based PowerPC CPU boards running Lynx OS. The computers were not dedicated to the benchmark. The test results show that even for the largest configurations the benchmark execution time is in an acceptable range (max. 1 minute to start-up a Linux based system). (authors)

Palmetto Academy: Undergraduates Exploring and Communicating the Multidisciplinary Nature of STEM

Science.gov (United States)

Hall, C.; Ali, A.; Runyon, C. J.; Colgan, M. W.

2012-12-01

One of the pillars of the US economy is a well-trained Science, Technology, Engineering and Math (STEM) workforce (National Academy of Sciences, 2007). The number of students choosing to study science and engineering has taken a dramatic decline. The percentage of those degrees conferred in SC was substantially lower than the national average and the percentage of those occupations within the SC workforce also falls below the national average, supporting the need for engaging and educational STEM programs. The NASA South Carolina Space Grant Consortium's Palmetto Research Academy (PRA) program is an immersive and integrated multidisciplinary exposure and training for undergraduate students with various backgrounds and career aspirations of critical importance to the Nation. This program offers exciting and inspiring hands-on research experiences that are aligned with NASA missions. The PRA advances NASA's research interest in areas such as aeronautics, biomedical science, sun-earth connections, planetary and Earth science. The PRA helps to develop the STEM workforce in STEM disciplines, a necessity in South Carolina. In addition, the PRA incorporates an education/outreach component, where the students engage secondary educators and students in NASA scientific and technical expertise. In 2012, the PRA had 10 research projects across the state in disciplines of mechanical and chemical engineering, bioengineering, chemistry, biogeooptical sciences, physics and astronomy and biomedical sciences. 18 undergraduates and 2 technical college students participated in authentic hands-on research mentored by leading scientists and engineers throughout the state. Examples projects include: A) Development of a series of astronomical telescopes to be mounted on a commercial human-tended suborbital rockets. The students built the instrument, including the power system and the mechanical interface, and performed function and fit testing on the XCOR Aerospace Lynx vehicle mock-up. B

Embryonal and post-embryonal sex correlation of the ungulates and predators in case of radioactive pollution of the organism and habitat

International Nuclear Information System (INIS)

Tyshkevich, V.

2002-01-01

In various publications concerning radioactive pollution there are facts about pollution level of the animal habitat, pollution of their main forage and intensification of species accumulation of radionuclides (The Elk and the Roe deer, Dunin, Voronetsky, Tyshkevitch, 1998). In a number of articles published earlier we proposed an analysis of sex and age group correlation of the ungulates depending on the habitat regime (a reserve, a sanctuary, a game husbandry). Special attention was paid to the influence of the anthropogenic factors and preying (i.e. wolf, lynx, fox) on the model populations. Moreover, there are publications concerning some change of cranio metrical indices of the mammals in the highly polluted areas, including the ungulates in the so- called Tchelyabinsky radioactive region, Russia (Danilkin et. al., 1985) and in Belarus there is an article on the morphological peculiarities of the roe deer (Tyshkevich, 1999). There are no works on the analysis of embryo correlation of the ungulates and predators females living in the areas with different pollution level of the habitat in the Belarus part of species areal. Working on the morphology of mammals (on the organometry, in particular) we paid constant attention to the significant predominance of the male embryos of the animals living in the highly polluted areas. In order to estimate the influence of this factor it has been decided to compare sex correlation of embryos in the populations living in the areas with high (Palesski State Reserve), average (the Statuary of Ostrova Duleby) and low (Nalibokskaya Puscha) habitat pollution level. The proposed model allows to state that 4 out of 5 species being analysed have evident disproportion of the sex correlation at the embryonal stage. For instance, sex correlation of the Elk and the Roe deer , on the whole, is close to 1: 1, but there is strong predominance of male embryos in the highly polluted areas. This regularity can be easily observed in the

Small instrument to volcanic seismic signals

Science.gov (United States)

Carreras, Normandino; Gomariz, Spartacus; Manuel, Antoni

2014-05-01

Currently, the presence of volcanoes represents a threat to their local populations, and for this reason, scientific communities invest resources to monitor seismic activity of an area, and to obtain information to identify risk situations. To perform such monitoring, it can use different general purpose acquisition systems commercially available, but these devices do not meet to the specifications of reduced dimensions, low weight, low power consumption and low cost. These features allow the system works in autonomous mode for a long period of time, and it makes easy to be carried and to be installed. In the line of designing a volcanic acquisition system with the previously mentioned specifications, exists the Volcanology Department of CSIC, developers of a system with some of these specifications. The objective of this work is to improve the energy consumption requirements of the previous system, providing three channels of data acquisition and with the possibility to transmit data acquisition via radio frequency to a base station, allowing operation it in remote mode. The developed acquisition system consists of three very low-power acquisition modules of Texas Instruments (ADS1246), and this is designed to capture information of the three coordinate axes. A microprocessor also of Texas Instruments (MSP430F5438) is used to work in low-power, due to it is ready to run this consumption and also takes advantage the power save mode in certain moments when system is not working. This system is configurable by serial port, and it has a SD memory to storage data. Contrast to the previous system, it has a RF communication module incorporated specially to work in remote mode of Lynx (YLX-TRM8053-025-05), and boasts also with a GPS module which keeps the time reference synchronized with module of SANAV (GM-1315LA). Thanks to this last selection of components, it is designed a small system about 106 x 106 mm. Assuming that the power supply system is working during all the

Patrones de distribución de felinos silvestres (Carnívora: Felidae en el trópico seco del Centro-Occidente de México

Directory of Open Access Journals (Sweden)

Juan Felipe Charre-Medellín

2015-09-01

Full Text Available El estado de Michoacán se caracteriza por presentar una importante heterogeneidad ambiental, en términos de clima, topografía y tipos de vegetación, que incluyen al bosque tropical seco que se encuentra en peligro de extinción a nivel mundial. Algunos trabajos mencionan la presencia de las seis especies de felinos que habitan en México, para la región; sin embargo, la evidencia para apoyar estos trabajos es escasa, por lo que llenar esta falta de información es especialmente crítico en el caso de especies o hábitats amenazados. El objetivo de este estudio fue sistematizar la información y analizar los patrones de distribución de los felinos en el estado de Michoacán, dentro del centro-occidente de México. Realizamos una revisión de la información bibliográfica y contenida en bases de datos sobre la presencia de felinos en esta región. Asimismo, realizamos trabajo de campo que en el curso de diez años donde se aplicaron distintos métodos para detectar la presencia de especies de felinos (recorrido de senderos para obtener evidencia directa e indirecta de la presencia de las especies, trampas cámara y entrevistas. Localizamos 29 registros de presencia en literatura y bases de datos. Por otra parte acumulamos un total de 1 107.5 km de transectos recorridos y 8 699 días/cámara-trampa. A través de este esfuerzo de muestreo, generamos 672 registros de presencia de las seis especies. Lynx rufusfue la especie con menos registros totales (n = 3 y cuya distribución contrastó más con la del resto de las especies. La especie con más registros fue Leopardus pardalis(n = 343. En general, el 89% de los registros de felinos se obtuvieron por debajo de los 1 000 msnm. En promedio, la temperatura media anual y la precipitación anual donde se ubicaron los registros fue de 24 °C y 1 040 mm respectivamente. La especie que mostro un patrón más claro en términos de temperatura y precipitación fue L. rufus(15.8 ± 1.3°C y 941 ± 171

Habitat Evaluation Procedures (HEP) Report : Hellsgate Project, 1999-2000 Technical Report.

Energy Technology Data Exchange (ETDEWEB)

Berger, Matthew

2000-05-01

A Habitat Evaluation Procedure (HEP) study was conducted on lands acquired and/or managed (4,568 acres total) by the Hellsgate Big Game Winter Range Wildlife Mitigation Project (Hellsgate project) to mitigate some of the losses associated with the original construction and operation of Grand Coulee Dam and inundation of habitats behind the dams. Three separate properties, totaling 2,224 acres were purchased in 1998. One property composed of two separate parcels, mostly grassland lies southeast of the town of Nespelem in Okanogan County (770 acres) and was formerly called the Hinman property. The former Hinman property lies within an area the Tribes have set aside for the protection and preservation of the sharp-tailed grouse (Agency Butte unit). This special management area minus the Hinman acquisition contains 2,388 acres in a long-term lease with the Tribes. The second property lies just south of the Silver Creek turnoff (Ferry County) and is bisected by the Hellsgate Road (part of the Friedlander unit). This parcel contains 60 acres of riparian and conifer forest cover. The third property (now named the Sand Hills unit) acquired for mitigation (1,394 acres) lies within the Hellsgate Reserve in Ferry County. This new acquisition links two existing mitigation parcels (the old Sand Hills parcels and the Lundstrum Flat parcel, all former Kuehne purchases) together forming one large unit. HEP team members included individuals from the Colville Confederated Tribes Fish and Wildlife Department (CTCR), Washington Department of Fish and Wildlife (WDFW), and Bureau of Land Management (BLM). The HEP team conducted a baseline habitat survey using the following HEP species models: mule deer (Odocoileus hemionus), mink (Mustela vison), downy woodpecker (Picoides pubescens), bobcat (Lynx rufus), yellow warbler (Dendroica petechia), and sharp-tailed grouse (Tympanuchus phasianellus columbianus). HEP analysis and results are discussed within the body of the text. The cover types

Damage from predation on the reindeer husbandry area in Finland during the years 1976-83

Directory of Open Access Journals (Sweden)

Mauri Nieminen

1985-05-01

Full Text Available During the years 1976-1983 predators killed a total of 8900 reindeer in Finland. The highest numbers of reindeer killed by predators were found in the marked areas of Inari, Kuusamo and Sodankyla and in the reindeer herding areas of Kasivarsi (a total of 873 reindeer, Kemi-Sompio (731, Lappi (658 and northern Salla (632. With the exception of the Kasivarsi reindeer herding area, predator damage was more or less concentrated on the reindeer herding areas on the eastern border. During 1977- 1982 the majority of reindeer killed by predators were hinds (49,6% and calves (41,0%. Predators killed most reindeer in April-June. In May and June the majority of reindeer killed by predators were calves. During 1977-83 most reindeer were killed by wolves (27,6%. wolverine (25,4%, bear (24,8% and eagles (14,5%. Wolves killed reindeer mainly in the autumn and early winter during the soft snow period. Wolverine and lynx killed reindeer in February-April in crusted snow conditions. Bears killed most reindeer during the calving period in May-June and reindeer killed by eagles were found in plenty in spring and summer.Petovahingot Suomen poronhoitoalueella vuosina 1976-83.Abstract in Finnish / Yhteenveto: Vuosina 1976-83 pedot tappoivat Suomessa yhteenså 8 900 poroa. Eniten petojen tappamia poroja lôytyin Inarin, Kuusamon ja Sodankylån merkkipiireisså sekå Kåsivarren (yhteenså 873 poroa, Kemin-Sompion (731, Lapin (685, ja Sallan pohjoisen (632 paliskunnissa. Kåsivarren paliskuntaa lukuunottamatta petovahingot keskittyivåt låhinnå itårajan paliskuntiin. Vuosina 1977-82 petojen tappamista poroista suurin osa oli vaatimia (49,6% ja vasoja (41,0%. Eniten pedot tappoivat poroja huhti - kesåkuun aikana. Tuoko - ja kesåkuussa suurin osa petojen tappamista poroista oli vasoja. Vuosina 1977-83 eniten poroja tappoivat susi (27,6%, ahma (25,4%, karhu (24,8% ja kokta (14,5%. Sudet tappoivat poroja pååasiassa syksyllå ja alkutalvella pehmeån lumen aikana

Server-side Statistics Scripting in PHP

Directory of Open Access Journals (Sweden)

Jan de Leeuw

1997-06-01

Full Text Available On the UCLA Statistics WWW server there are a large number of demos and calculators that can be used in statistics teaching and research. Some of these demos require substantial amounts of computation, others mainly use graphics. These calculators and demos are implemented in various different ways, reflecting developments in WWW based computing. As usual, one of the main choices is between doing the work on the client-side (i.e. in the browser or on the server-side (i.e. on our WWW server. Obviously, client-side computation puts fewer demands on the server. On the other hand, it requires that the client downloads Java applets, or installs plugins and/or helpers. If JavaScript is used, client-side computations will generally be slow. We also have to assume that the client is installed properly, and has the required capabilities. Requiring too much on the client-side has caused browsing machines such as Netscape Communicator to grow beyond all reasonable bounds, both in size and RAM requirements. Moreover requiring Java and JavaScript rules out such excellent browsers as Lynx or Emacs W3. For server-side computing, we can configure the server and its resources ourselves, and we need not worry about browser capabilities and configuration. Nothing needs to be downloaded, except the usual HTML pages and graphics. In the same way as on the client side, there is a scripting solution, where code is interpreted, or a ob ject-code solution using compiled code. For the server-side scripting, we use embedded languages, such as PHP/FI. The scripts in the HTML pages are interpreted by a CGI program, and the output of the CGI program is send to the clients. Of course the CGI program is compiled, but the statistics procedures will usually be interpreted, because PHP/FI does not have the appropriate functions in its scripting language. This will tend to be slow, because embedded languages do not deal efficiently with loops and similar constructs. Thus a first

Deformation Monitoring of Motorway Underpasses Using Laser Scanning Data

Science.gov (United States)

Puente, I.; González-Jorge, H.; Riveiro, B.; Arias, P.

2012-07-01

is a Optech Lynx mobile LiDAR. This laser scanner is based on time of flight technology and presents an accuracy of 6 mm in the determination of the geometrical coordinates. This accuracy can be improved to around 1 mm using fitting post-processing techniques and makes this technology very useful for studies related with deformation monitoring. The laser scanner, in comparison with other geodetic techniques as total stations, allows the control of all the structure, including unexpected deformations. Reflective targets are permanently positioned over the small walls of the structure to allow the 3D orientation of the different scans. Two main scans are made for this study, before and after the backfilling process. Backfilling takes about 10 days for the construction companies. The scans need a time of approximately 12 minutes. Construction works do not need to be interrupted during the scans. Point clouds are then post-processed using QT Modeler Software. First, the point cloud is cleaned to use only the data directly related with the structure under study. Then, using the target coordinates, both point clouds are moved to the same coordinate system. Finally, the deformation of the underpass is studied using two algorithms specifically developed using Matlab software. First algorithm fits a geometrical surface to the point cloud of the first scan and evaluates the residuals of both scans for this fitting surface. Differences in the residuals give the deformation map of the structure. Second algorithm takes a portion of the point cloud from the top of the structure, where it is located the joining point between the voussoirs. The joining between two voussoirs shows a height step that in an ideal case must tend to zero. Deformations produced by the loading of the structure are measured as a comparison between the steps before and after the backfilling process. The analysis of the results show as some deformation occurs in the structure in the joining point of the

DEFORMATION MONITORING OF MOTORWAY UNDERPASSES USING LASER SCANNING DATA

Directory of Open Access Journals (Sweden)

I. Puente

2012-07-01

deformation monitoring is a Optech Lynx mobile LiDAR. This laser scanner is based on time of flight technology and presents an accuracy of 6 mm in the determination of the geometrical coordinates. This accuracy can be improved to around 1 mm using fitting post-processing techniques and makes this technology very useful for studies related with deformation monitoring. The laser scanner, in comparison with other geodetic techniques as total stations, allows the control of all the structure, including unexpected deformations. Reflective targets are permanently positioned over the small walls of the structure to allow the 3D orientation of the different scans. Two main scans are made for this study, before and after the backfilling process. Backfilling takes about 10 days for the construction companies. The scans need a time of approximately 12 minutes. Construction works do not need to be interrupted during the scans. Point clouds are then post-processed using QT Modeler Software. First, the point cloud is cleaned to use only the data directly related with the structure under study. Then, using the target coordinates, both point clouds are moved to the same coordinate system. Finally, the deformation of the underpass is studied using two algorithms specifically developed using Matlab software. First algorithm fits a geometrical surface to the point cloud of the first scan and evaluates the residuals of both scans for this fitting surface. Differences in the residuals give the deformation map of the structure. Second algorithm takes a portion of the point cloud from the top of the structure, where it is located the joining point between the voussoirs. The joining between two voussoirs shows a height step that in an ideal case must tend to zero. Deformations produced by the loading of the structure are measured as a comparison between the steps before and after the backfilling process. The analysis of the results show as some deformation occurs in the structure in the joining

NASA's Swift Satellite Catches First Supernova in The Act of Exploding

Science.gov (United States)

2008-05-01

constellation Lynx. At 9:33 a.m. EST they spotted an extremely bright 5-minute X-ray outburst in NGC 2770. They quickly recognized that the X-rays were coming from another location in the same galaxy. People Who Read This Also Read... Black Holes Have Simple Feeding Habits Jet Power and Black Hole Assortment Revealed in New Chandra Image Chandra Data Reveal Rapidly Whirling Black Holes Ghostly Glow Reveals a Hidden Class of Long-Wavelength Radio Emitters In a paper submitted to Nature, Soderberg and 38 colleagues show that the energy and pattern of the X-ray outburst is consistent with a shock wave bursting through the surface of the progenitor star. This marks the birth of the supernova now known as SN 2008D. Although astronomers were lucky that Swift was observing NGC 2770 just at the moment when SN 2008D’s shock wave was blowing up the star, Swift is well equipped to study such an event because of its multiple instruments observing in gamma rays, X-rays, and ultraviolet light. "It was a gift of nature for Swift to be observing that patch of sky when the supernova exploded. But thanks to Swift's flexibility, we have been able to trace its evolution in detail every day since," says Swift lead scientist Neil Gehrels of NASA’s Goddard Space Flight Center in Greenbelt, Md. Due to the significance of the X-ray outburst, Soderberg immediately mounted an international observing campaign to study SN 2008D. Observations were made with major telescopes such as the Hubble Space Telescope, the Chandra X-ray Observatory, the Very Large Array in New Mexico, the Gemini North telescope in Hawaii, the Keck I telescope in Hawaii, the 200-inch and 60-inch telescopes at the Palomar Observatory in California, and the 3.5-meter telescope at the Apache Point Observatory in New Mexico. The combined observations helped Soderberg and her colleagues pin down the energy of the initial X-ray outburst, which will help theorists better understand supernovae. The observations also show that SN 2008D is

Gopherus Agassizii (Desert Tortoise). Predation/Mountain Lions (Pre-Print)

Energy Technology Data Exchange (ETDEWEB)

Paul D. Greger and Philip A. Medica

2009-01-01

sized Mountain Lion. By comparison, a 2 year old male Mountain Lion salvaged on NTS had an upper intercanine bite width of 45 mm, and a 6 month old kitten measured 35mm respectively. The Mountain Lion (Puma concolor) is the only predator that exists in southern Nevada that could possibly have a bite with a gap between its upper canine teeth that large (Murmann et al. 2006. J. Forensic Sci. 51:846-860). The appearance of the shell remains in Figure 1A is similar to that depicting Jaguar (Panthera onca) predation, on the Amazonian Tortoise (Geochelone denticulata) as illustrated by Emmons (1989. J. Herpetol. 23:311-314) with the majority of the carapace broken open and the plastron still intact. Predation of Desert Tortoises by Mountain Lions was also documented in 1993 in southern Arizona (Little Shipp Wash Plot), where 7 of 8 carcasses found were attributed to Mountain Lion predation (Averill-Murray et al. 2002. In. T.R.Van Devender [ed.], The Sonoran Desert Tortoise: Natural History, Biology, and Conservation, pp.109-134. University of Arizona Press and Arizona-Sonora Desert Museum, Tucson, Arizona). Similarly, predation by a Mountain Lion has been reported on the Argentine Tortoise (Chelonoidis chilensis) in Argentina (Acosta et al. 2004. Herpetol. Review 35:53-54), and a Mountain Lion kitten was observed to kill and consume a portion of the carapace of a Texas Tortoise (Gopherus berlandieri) in west Texas (Adams et al. 2006. Southwestern Nat. 51:581-581). Over the past 45 years this Desert Tortoise population has been monitored yearly, with no prior evidence of predation to tortoises within the fenced enclosures. On several occasions other predators such as Bobcats (Lynx rufus) have been observed within the study enclosures for as long as a week. Evidence of Kit Fox (Vulpes macrotus) sign has been observed on numerous occasions, and a Spotted Skunk (Spilogale putorius) and Longtail Weasels (Mustela frenata) have been captured and released (B.G. Maza, pers. comm

Massive Star Burps, Then Explodes

Science.gov (United States)

2007-04-01

evolved stars that have shed their outer envelopes. Swift XRT Image Swift XRT Image (Credit: NASA / GSFC / CXC /S.Immler) Most astronomers did not expect that a massive star would explode so soon after a major outburst, or that a Wolf-Rayet star would produce such a luminous eruption, so SN 2006jc represents a puzzle for theorists. "It challenges some aspects of our current model of stellar evolution," says Foley. "We really don't know what caused this star to have such a large eruption so soon before it went supernova." "SN 2006jc provides us with an important clue that LBV-style eruptions may be related to the deaths of massive stars, perhaps more closely than we used to think," adds coauthor and UC Berkeley astronomer Nathan Smith. "The fact that we have no well-established theory for what actually causes these outbursts is the elephant in the living room that nobody is talking about." SN 2006jc occurred in galaxy UGC 4904, located 77 million light years from Earth in the constellation Lynx. The supernova explosion, a peculiar variant of a Type Ib, was first sighted by Itagaki, American amateur astronomer Tim Puckett and Italian amateur astronomer Roberto Gorelli. See also NASA Goddard press release at: http://www.nasa.gov/centers/goddard/news/topstory/ 2007/supernova_imposter.html