WorldWideScience

Sample records for hybridization fish studies

  1. Marine Fish Hybridization

    KAUST Repository

    He, Song

    2017-04-01

    Natural hybridization is reproduction (without artificial influence) between two or more species/populations which are distinguishable from each other by heritable characters. Natural hybridizations among marine fishes were highly underappreciated due to limited research effort; it seems that this phenomenon occurs more often than is commonly recognized. As hybridization plays an important role in biodiversity processes in the marine environment, detecting hybridization events and investigating hybridization is important to understand and protect biodiversity. The first chapter sets the framework for this disseration study. The Cohesion Species Concept was selected as the working definition of a species for this study as it can handle marine fish hybridization events. The concept does not require restrictive species boundaries. A general history and background of natural hybridization in marine fishes is reviewed during in chapter as well. Four marine fish hybridization cases were examed and documented in Chapters 2 to 5. In each case study, at least one diagnostic nuclear marker, screened from among ~14 candidate markers, was found to discriminate the putative hybridizing parent species. To further investigate genetic evidence to support the hybrid status for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations together, the potential reasons that triggered each hybridization events and the potential genetic/ecology effects could be discussed. In the last chapter, sequences from 82 pairs of hybridizing parents species (for which COI barcoding sequences were available either on GenBank or in our lab) were collected. By comparing the COI fragment p-distance between each hybridizing parent species, some general questions about marine fish hybridization were discussed: Is

  2. Marine Fish Hybridization

    KAUST Repository

    He, Song

    2017-01-01

    for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations

  3. Automation of ALK gene rearrangement testing with fluorescence in situ hybridization (FISH): a feasibility study.

    Science.gov (United States)

    Zwaenepoel, Karen; Merkle, Dennis; Cabillic, Florian; Berg, Erica; Belaud-Rotureau, Marc-Antoine; Grazioli, Vittorio; Herelle, Olga; Hummel, Michael; Le Calve, Michele; Lenze, Dido; Mende, Stefanie; Pauwels, Patrick; Quilichini, Benoit; Repetti, Elena

    2015-02-01

    In the past several years we have observed a significant increase in our understanding of molecular mechanisms that drive lung cancer. Specifically in the non-small cell lung cancer sub-types, ALK gene rearrangements represent a sub-group of tumors that are targetable by the tyrosine kinase inhibitor Crizotinib, resulting in significant reductions in tumor burden. Phase II and III clinical trials were performed using an ALK break-apart FISH probe kit, making FISH the gold standard for identifying ALK rearrangements in patients. FISH is often considered a labor and cost intensive molecular technique, and in this study we aimed to demonstrate feasibility for automation of ALK FISH testing, to improve laboratory workflow and ease of testing. This involved automation of the pre-treatment steps of the ALK assay using various protocols on the VP 2000 instrument, and facilitating automated scanning of the fluorescent FISH specimens for simplified enumeration on various backend scanning and analysis systems. The results indicated that ALK FISH can be automated. Significantly, both the Ikoniscope and BioView system of automated FISH scanning and analysis systems provided a robust analysis algorithm to define ALK rearrangements. In addition, the BioView system facilitated consultation of difficult cases via the internet. Copyright © 2015 Elsevier Inc. All rights reserved.

  4. [HER-2 oncogene amplification assessment in invasive breast cancer by dual-color in situ hybridization (dc-CISH): a comparative study with fluorescent in situ hybridization (FISH)].

    Science.gov (United States)

    Akhdar, Abbas; Bronsard, Marc; Lemieux, Renald; Geha, Sameh

    2011-12-01

    The amplification of the gene encoding for the human epidermal growth factor receptor 2 (HER-2 oncogene), located on chromosome 17 (17q21-q22), or the overexpression of this receptor have prognostic and therapeutic implications in invasive breast cancer. An evaluation of the HER-2 status by immunohistochemistry (IHC) is performed on all invasive breast cancer cases. Fluorescent in situ hybridization (FISH) is considered as the gold standard for the detection of HER-2 gene amplification for IHC equivocal cases (score 2+). A more recent in situ hybridization technique, the dual-color chromogenic in situ hybridization (dc-CISH), has been proposed as an alternative to FISH. The aim of this study was to measure the correlation between dc-CISH and FISH for HER-2 oncogene amplification assessment in invasive breast cancer. We built four tissue micro-array (TMA) blocs with 100 breast invasive cancer cases that had been previously tested by IHC for HER-2 detection: 10 score 0 cases, 10 score 3+cases, 39 score 1+and 41 score 2+cases. Both FISH and dc-CISH techniques were applied on all TMA cases as well as on two additional slides serving as controls. Interpretation of dc-CISH was carried out by a pathologist using an optical microscope. For FISH, the interpretation was done by a professional from the medical genetics department using a fluorescent microscope linked to a computer system for image capturing and analysis. The interpretation of the HER-2/CEN-17 ratio for both tests was in accordance with the values of the updated recommendations from the Canadian National Consensus Meeting on HER-2/neu testing in breast cancer and from the ASCO/CAP. Among the 100 cases initially included in the study, eight were excluded from the analysis due to sampling or technical flaws. From the 92 remaining cases, we obtained a concordance of 97.8% (90/92 cases) between the two techniques (Kappa coefficient 0.97, 95% confidence interval). The correlation coefficient (rho) between ratios

  5. The chromosomal constitution of fish hybrid lineage revealed by 5S rDNA FISH.

    Science.gov (United States)

    Zhang, Chun; Ye, Lihai; Chen, Yiyi; Xiao, Jun; Wu, Yanhong; Tao, Min; Xiao, Yamei; Liu, Shaojun

    2015-12-03

    The establishment of the bisexual fertile fish hybrid lineage including the allodiploid and allotetraploid hybrids, from interspecific hybridization of red crucian carp (Carassius auratus red var. 2n = 100, 2n = AA) (♀) × common carp (Cyprinus carpio L. 2n = 100, 2n = BB) (♂), provided a good platform to investigate genetic relationship between the parents and their hybrid progenies. The chromosomal inheritance of diploid and allotetraploid hybrid progenies in successive generations, was studied by applying 5S rDNA fluorescence in situ hybridization. Signals of 5S rDNA distinguished the chromosomal constitution of common carp (B-genome) from red crucian carp (A-genome), in which two strong signals were observed on the first submetacentric chromosome, while no major signal was found in common carp. After fish hybridization, one strong signal of 5S rDNA was detected in the same locus on the chromosome of diploid hybrids. As expected, two strong signals were observed in 4nF3 tetraploid hybrids offspring and it is worth mentioning that two strong signals were detected in a separating bivalent of a primary spermatocyte in 4nF3. Furthermore, the mitosis of heterozygous chromosomes was shown normal and stable with blastular tissue histological studies. We revealed that 5S rDNA signal can be applied to discern A-genome from B-genome, and that 5S rDNA bearing chromosomes can be stably passed down in successive generations. Our work provided a significant method in fish breeding and this is important for studies in fish evolutionary biology.

  6. Fluorescent in situ hybridization (FISH) on corneal impression cytology specimens (CICS): study of epithelial cell survival after keratoplasty.

    Science.gov (United States)

    Catanese, Muriel; Popovici, Cornel; Proust, Hélène; Hoffart, Louis; Matonti, Frédéric; Cochereau, Isabelle; Conrath, John; Gabison, Eric E

    2011-02-22

    To assess corneal epithelial cell survival after keratoplasty. Corneal impression cytology (CIC) was performed on sex-mismatched corneal transplants. Fluorescent in situ hybridization (FISH) with sex chromosome-specific probes was performed to identify epithelial cell mosaicism and therefore allocate the donor or recipient origin of the cells. Twenty-four samples of corneal epithelial cells derived from 21 transplanted patients were analyzed. All patients received post-operative treatment using dexamethasone eye drops, with progressive tapering over 18 months, and nine patients also received 2% cyclosporine eye drops. Out of the 24 samples reaching quality criteria, sex mosaicism was found in 13, demonstrating the presence of donor-derived cells at the center of the graft for at least 211 days post keratoplasty. Kaplan-Meier analysis established a median survival of donor corneal epithelial cells of 385 days. Although not statistically significant, the disappearance of donor cells seemed to be delayed and the average number of persistent cells appeared to be greater when 2% cyclosporine was used topically as an additional immunosuppressive therapy. The combination of corneal impressions and FISH analysis is a valuable tool with negligible side effects to investigate the presence of epithelial cell mosaicism in sex-mismatched donor transplants. Epithelial cells survived at the center of the graft with a median survival of more than one year, suggesting slower epithelial turnover than previously described.

  7. The effect of hybridization on fish physiology, immunity and blood biochemistry: A case study in hybridizing Cyprinus carpio and Carassius gibelio (Cyprinidae)

    Czech Academy of Sciences Publication Activity Database

    Šimková, A.; Vojtek, L.; Halačka, Karel; Hyršl, P.; Vetešník, Lukáš

    2015-01-01

    Roč. 435, č. 1 (2015), s. 381-389 ISSN 0044-8486 R&D Projects: GA ČR GAP505/12/0375 Institutional support: RVO:68081766 Keywords : Hybridization * Cyprinids * Blood biochemistry * Hematology * Immunity Subject RIV: EG - Zoology Impact factor: 1.893, year: 2015

  8. Parasitic fauna in hybrid tambacu from fish farms

    Directory of Open Access Journals (Sweden)

    Ronilson Macedo Silva

    2013-08-01

    Full Text Available The objective of this work was to evaluate the parasitic fauna of hybrid tambacu (Colossoma macropomum x Piaractus mesopotamicus from fish farms and the host-parasite relationship. A hundred and fourteen fish were collected from four fish farms in Macapá, in the state of Amapá, Brazil, 80.7% of which were infected by: Ichthyophthirius multifiliis (Ciliophora; Piscinoodinium pillulare (Dinoflagellida; Anacanthorus spatulatus, Notozothecium janauachensis, and Mymarothecium viatorum (Monogenoidea; Neoechinorhynchus buttnerae (Acanthocephala; Cucullanus colossomi (Nematoda; Perulernaea gamitanae (Lernaeidae; and Proteocephalidae larvae (Cestoda. A total of 8,136,252 parasites were collected from the examined fish. This is the first record of N. buttnerae, C. colossomi, N. janauachensis, M. viatorum, and Proteocephalidae for hybrid tambacu in Brazil. Ichthyophthirius multifiliis was the most prevalent parasite, whereas endohelminths were the less. A positive correlation was observed between number of I. multifiliis and total length and weight of fish, as well as between number of P. gamitanae and total length. The infection by I. multifiliis had association with the parasitism by Monogenoidea. Low water quality contributes to high parasitism of hybrid tambacu by ectoparasites, which, however, does not influence the relative condition factor of fish.

  9. 21 CFR 866.4700 - Automated fluorescence in situ hybridization (FISH) enumeration systems.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Automated fluorescence in situ hybridization (FISH... Laboratory Equipment and Reagents § 866.4700 Automated fluorescence in situ hybridization (FISH) enumeration... Hybridization (FISH) Enumeration Systems.” See § 866.1(e) for the availability of this guidance document. [70 FR...

  10. Introgressive hybridization in Iberian cyprinid fishes:a cytogenomic approach to homoploid Leuciscinae

    OpenAIRE

    Pereira, Carla Sofia Alves, 1983-

    2013-01-01

    Tese de doutoramento, Biologia (Biologia Evolutiva), Universidade de Lisboa, Faculdade de Ciências, 2013 Hybridization is currently a well-recognized process amongst animals responsible for biodiversity, evolution and speciation processes while defying most species concepts. Hybridization is prevalent among fishes, particularly cyprinids, which therefore constitute good models of study (1) to access general patterns of genomic variation, (2) to identify the genetic basis and the evolutiona...

  11. Influence of environment and mitochondrial heritage on the ecological characteristics of fish in a hybrid zone.

    Directory of Open Access Journals (Sweden)

    Nicolas Stolzenberg

    2009-06-01

    Full Text Available Ecological characteristics (growth, morphology, reproduction arise from the interaction between environmental factors and genetics. Genetic analysis of individuals' life history traits might be used to improve our understanding of mechanisms that form and maintain a hybrid zone.A fish hybrid zone was used to characterize the process of natural selection. Data were collected during two reproductive periods (2001 and 2002 and 1117 individuals (nase, Chondrostama nasus nasus, sofie C. toxostoma toxostoma and hybrids were sampled. Reproductive dates of the two parental species overlapped at sympatric sites. The nase had an earlier reproductive period than the sofie; males had longer reproductive periods for both species. Hybridisation between female nase and male sofie was the most likely. Hybrids had a reproductive period similar to the inherited parental mitochondrial type. Growth and reproductive information from different environments has been synthesised following a bayesian approach of the von Bertalanffy model. Hybrid life history traits appear to link with maternal heritage. Hybrid size from the age of two and size at first maturity appeared to be closer to the size of the maternal origin species (nase or sofie. Median growth rates for hybrids were similar and intermediate between those of the parental species. We observed variable life history traits for hybrids and pure forms in the different parts of the hybrid zone. Geometrical analysis of the hybrid fish shape gave evidence of two main morphologies with a link to maternal heritage.Selective mating seemed to be the underlying process which, with mitochondrial heritage, could explain the evolution of the studied hybrid zone. More generally, we showed the importance of studies on hybrid zones and specifically the study of individuals' ecological characteristics, to improve our understanding of speciation.

  12. Influence of environment and mitochondrial heritage on the ecological characteristics of fish in a hybrid zone.

    Science.gov (United States)

    Stolzenberg, Nicolas; Nguyen The, Bénédicte; Salducci, Marie Dominique; Cavalli, Laurent

    2009-06-18

    Ecological characteristics (growth, morphology, reproduction) arise from the interaction between environmental factors and genetics. Genetic analysis of individuals' life history traits might be used to improve our understanding of mechanisms that form and maintain a hybrid zone. A fish hybrid zone was used to characterize the process of natural selection. Data were collected during two reproductive periods (2001 and 2002) and 1117 individuals (nase, Chondrostama nasus nasus, sofie C. toxostoma toxostoma and hybrids) were sampled. Reproductive dates of the two parental species overlapped at sympatric sites. The nase had an earlier reproductive period than the sofie; males had longer reproductive periods for both species. Hybridisation between female nase and male sofie was the most likely. Hybrids had a reproductive period similar to the inherited parental mitochondrial type. Growth and reproductive information from different environments has been synthesised following a bayesian approach of the von Bertalanffy model. Hybrid life history traits appear to link with maternal heritage. Hybrid size from the age of two and size at first maturity appeared to be closer to the size of the maternal origin species (nase or sofie). Median growth rates for hybrids were similar and intermediate between those of the parental species. We observed variable life history traits for hybrids and pure forms in the different parts of the hybrid zone. Geometrical analysis of the hybrid fish shape gave evidence of two main morphologies with a link to maternal heritage. Selective mating seemed to be the underlying process which, with mitochondrial heritage, could explain the evolution of the studied hybrid zone. More generally, we showed the importance of studies on hybrid zones and specifically the study of individuals' ecological characteristics, to improve our understanding of speciation.

  13. Mirror hybrid reactor studies

    International Nuclear Information System (INIS)

    Bender, D.J.

    1978-01-01

    The hybrid reactor studies are reviewed. The optimization of the point design and work on a reference design are described. The status of the nuclear analysis of fast spectrum blankets, systems studies for fissile fuel producing hybrid reactor, and the mechanical design of the machine are reviewed

  14. Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish

    KAUST Repository

    Harrison, Hugo B.

    2017-10-28

    Coral reefs are highly diverse ecosystems, where numerous closely related species often coexist. How new species arise and are maintained in these high geneflow environments have been long-standing conundrums. Hybridization and patterns of introgression between sympatric species provide a unique insight into the mechanisms of speciation and the maintenance of species boundaries. In this study, we investigate the extent of hybridization between two closely related species of coral reef fish: the common coral trout (Plectropomus leopardus) and the bar-cheek coral trout (Plectropomus maculatus). Using a complementary set of 25 microsatellite loci, we distinguish pure genotype classes from first- and later-generation hybrids, identifying 124 interspecific hybrids from a collection of 2,991 coral trout sampled in inshore and mid-shelf reefs of the southern Great Barrier Reef. Hybrids were ubiquitous among reefs, fertile and spanned multiple generations suggesting both ecological and evolutionary processes are acting to maintain species barriers. We elaborate on these finding to investigate the extent of genomic introgression and admixture from 2,271 SNP loci recovered from a ddRAD library of pure and hybrid individuals. An analysis of genomic clines on recovered loci indicates that 261 SNP loci deviate from a model of neutral introgression, of which 132 indicate a pattern of introgression consistent with selection favouring both hybrid and parental genotypes. Our findings indicate genome-wide, bidirectional introgression between two sympatric species of coral reef fishes and provide further support to a growing body of evidence for the role of hybridization in the evolution of coral reef fishes.

  15. Fluorescence In Situ Hybridization (FISH Signal Analysis Using Automated Generated Projection Images

    Directory of Open Access Journals (Sweden)

    Xingwei Wang

    2012-01-01

    Full Text Available Fluorescence in situ hybridization (FISH tests provide promising molecular imaging biomarkers to more accurately and reliably detect and diagnose cancers and genetic disorders. Since current manual FISH signal analysis is low-efficient and inconsistent, which limits its clinical utility, developing automated FISH image scanning systems and computer-aided detection (CAD schemes has been attracting research interests. To acquire high-resolution FISH images in a multi-spectral scanning mode, a huge amount of image data with the stack of the multiple three-dimensional (3-D image slices is generated from a single specimen. Automated preprocessing these scanned images to eliminate the non-useful and redundant data is important to make the automated FISH tests acceptable in clinical applications. In this study, a dual-detector fluorescence image scanning system was applied to scan four specimen slides with FISH-probed chromosome X. A CAD scheme was developed to detect analyzable interphase cells and map the multiple imaging slices recorded FISH-probed signals into the 2-D projection images. CAD scheme was then applied to each projection image to detect analyzable interphase cells using an adaptive multiple-threshold algorithm, identify FISH-probed signals using a top-hat transform, and compute the ratios between the normal and abnormal cells. To assess CAD performance, the FISH-probed signals were also independently visually detected by an observer. The Kappa coefficients for agreement between CAD and observer ranged from 0.69 to 1.0 in detecting/counting FISH signal spots in four testing samples. The study demonstrated the feasibility of automated FISH signal analysis that applying a CAD scheme to the automated generated 2-D projection images.

  16. The application of fluorescence in situ hybridization (FISH technique for studying the microbial communities in intestinal tissues of white shrimp (Penaeus vannamei

    Directory of Open Access Journals (Sweden)

    Supamattaya, K.

    2005-02-01

    Full Text Available Fluorescence in situ hybridization technique is very useful for the evaluation of microbial communities in various environments. It is possible to apply this technique to study the intestinal microflora in white shrimp (Penaeus vannamei. Different fixatives and storage temperature were tested in this technique. It was found that fixation with 10% buffered formalin for 12 hours and changed to 70% ethanol shown positive results when compared to the fixation with Davidson's fixative or RF fixative. The best signaling was obtainedfrom the samples which were stored in -20ºC. By using the DNA probe targeted to the Eubacteria domain (EUB338 probe, 5′-GCT GCC TCC CGT AGG AGT-3′ labeled with fluorescein as a hybridizing probe, it was found that most intestinal microflora were aggregated with the intestinal contents, or dispersed in the lumen. There was not evidence of the attachment of the microflora with the intestinal epithelium in this study.

  17. Standardization and optimization of fluorescence in situ hybridization (FISH) for HER-2 assessment in breast cancer: A single center experience.

    Science.gov (United States)

    Bogdanovska-Todorovska, Magdalena; Petrushevska, Gordana; Janevska, Vesna; Spasevska, Liljana; Kostadinova-Kunovska, Slavica

    2018-05-20

    Accurate assessment of human epidermal growth factor receptor 2 (HER-2) is crucial in selecting patients for targeted therapy. Commonly used methods for HER-2 testing are immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). Here we presented the implementation, optimization and standardization of two FISH protocols using breast cancer samples and assessed the impact of pre-analytical and analytical factors on HER-2 testing. Formalin fixed paraffin embedded (FFPE) tissue samples from 70 breast cancer patients were tested for HER-2 using PathVysion™ HER-2 DNA Probe Kit and two different paraffin pretreatment kits, Vysis/Abbott Paraffin Pretreatment Reagent Kit (40 samples) and DAKO Histology FISH Accessory Kit (30 samples). The concordance between FISH and IHC results was determined. Pre-analytical and analytical factors (i.e., fixation, baking, digestion, and post-hybridization washing) affected the efficiency and quality of hybridization. The overall hybridization success in our study was 98.6% (69/70); the failure rate was 1.4%. The DAKO pretreatment kit was more time-efficient and resulted in more uniform signals that were easier to interpret, compared to the Vysis/Abbott kit. The overall concordance between IHC and FISH was 84.06%, kappa coefficient 0.5976 (p characteristics. Differences in the pre-analytical and analytical steps can affect the hybridization quality and efficiency. The use of DAKO pretreatment kit is time-saving and cost-effective.

  18. Standardization and optimization of fluorescence in situ hybridization (FISH for HER-2 assessment in breast cancer: A single center experience

    Directory of Open Access Journals (Sweden)

    Magdalena Bogdanovska-Todorovska

    2018-05-01

    Full Text Available Accurate assessment of human epidermal growth factor receptor 2 (HER-2 is crucial in selecting patients for targeted therapy. Commonly used methods for HER-2 testing are immunohistochemistry (IHC and fluorescence in situ hybridization (FISH. Here we presented the implementation, optimization and standardization of two FISH protocols using breast cancer samples and assessed the impact of pre-analytical and analytical factors on HER-2 testing. Formalin fixed paraffin embedded (FFPE tissue samples from 70 breast cancer patients were tested for HER-2 using PathVysion™ HER-2 DNA Probe Kit and two different paraffin pretreatment kits, Vysis/Abbott Paraffin Pretreatment Reagent Kit (40 samples and DAKO Histology FISH Accessory Kit (30 samples. The concordance between FISH and IHC results was determined. Pre-analytical and analytical factors (i.e., fixation, baking, digestion, and post-hybridization washing affected the efficiency and quality of hybridization. The overall hybridization success in our study was 98.6% (69/70; the failure rate was 1.4%. The DAKO pretreatment kit was more time-efficient and resulted in more uniform signals that were easier to interpret, compared to the Vysis/Abbott kit. The overall concordance between IHC and FISH was 84.06%, kappa coefficient 0.5976 (p < 0.0001. The greatest discordance (82% between IHC and FISH was observed in IHC 2+ group. A standardized FISH protocol for HER-2 assessment, with high hybridization efficiency, is necessary due to variability in tissue processing and individual tissue characteristics. Differences in the pre-analytical and analytical steps can affect the hybridization quality and efficiency. The use of DAKO pretreatment kit is time-saving and cost-effective.

  19. Tokamak hybrid study

    International Nuclear Information System (INIS)

    Tenney, F.H.

    1976-09-01

    A report on one year of study of a tokamak hybrid reactor is presented. The plasma is maintained by both D and T beams. To obtain long burn times a poloidal field divertor is required. Both the single null and the double null style of divertor are considered. The blanket consists of a neutron multiplier region containing natural uranium followed by burner regions of molten salt (flibe) loaded with PuF 3 to enhance the energy multiplication. Economic analysis has been applied only recently to a variety of reactor sizes and plasma conditions. Early indications suggest that the most attractive hybrids will have large plasmas of major radius in excess of 8 meters

  20. Tokamak hybrid study

    International Nuclear Information System (INIS)

    Tenney, F.H.

    1976-01-01

    A report on one year of study of a tokamak hybrid reactor is given. The plasma is maintained by both D and T beams. To obtain long burn times a poloidal field divertor is required. Both the single null and the double null style of divertor are considered. The blanket consists of a neutron multiplier region containing natural uranium followed by burner regions of molten salt (flibe) loaded with PuF 3 to enhance the energy multiplication. Economic analysis has been applied only recently to a variety of reactor sizes and plasma conditions. Early indications suggest that the most attractive hybrids will have large plasmas of major radius in excess of 8 meters

  1. Studies of the Ecophysiology of Single Cells in Microbial Communities by (Quantitative) Microautoradiography and Fluorescence In Situ Hybridization (MAR-FISH)

    DEFF Research Database (Denmark)

    Nierychlo, Marta; Nielsen, Jeppe Lund; Nielsen, Per Halkjær

    2015-01-01

    image analysis (MARQuant). Quantification of MAR signals can answer more specific questions regarding metabolic activity and function of the microbes. Here, we give an overview of how to use MAR-FISH in various ecosystems and provide a detailed protocol for MAR-FISH, including sampling, incubation...

  2. Detection of airborne Legionella while showering using liquid impingement and fluorescent in situ hybridization (FISH).

    Science.gov (United States)

    Deloge-Abarkan, Magali; Ha, Thi-Lan; Robine, Enric; Zmirou-Navier, Denis; Mathieu, Laurence

    2007-01-01

    Aerosols of water contaminated with Legionella bacteria constitute the only mode of exposure for humans. However, the prevention strategy against this pathogenic bacteria risk is managed through the survey of water contamination. No relationship linked the Legionella bacteria water concentration and their airborne abundance. Therefore, new approaches in the field of the metrological aspects of Legionella bioaerosols are required. This study was aimed at testing the main principles for bioaerosol collection (solid impaction, liquid impingement and filtration) and the in situ hybridization (FISH) method, both in laboratory and field assays, with the intention of applying such methodologies for airborne Legionella bacteria detection while showering. An aerosolization chamber was developed to generate controlled and reproducible L. pneumophila aerosols. This tool allowed the identification of the liquid impingement method as the most appropriate one for collecting airborne Legionella bacteria. The culturable fraction of airborne L. pneumophila recovered with the liquid impingement principle was 4 and 700 times higher compared to the impaction and filtration techniques, respectively. Moreover, the concentrations of airborne L. pneumophila in the impinger fluid were on average 7.0 x 10(5) FISH-cells m(-3) air with the fluorescent in situ hybridization (FISH) method versus 9.0 x 10(4) CFU m(-3) air with the culture method. These results, recorded under well-controlled conditions, were confirmed during the field experiments performed on aerosols generated by hot water showers in health institutions. This new approach may provide a more accurate characterization of aerobiocontamination by Legionella bacteria.

  3. Radiobiological studies with marine fish

    International Nuclear Information System (INIS)

    Pentreath, R.J.

    1975-01-01

    The experimental methodology employed in radiobiological studies with fish is discussed and reviewed. The problems of care and maintenance of healthy stock fish are cons. (author)idered, including the techniques of egg and larval rearing. A variety of methods have been used to study the accumulation and loss of radionuclides, including labelled water, food and injections, and their relative merits are discussed in conjunction with the parameters affecting these processes. Other, more specialized, techniques that aid the physiological interpretation of tracer experiments are also discussed. Finally, consideration is given to some of the mathematical models that have been applied to radiobiological studies with fish, and of their value in extrapolating laboratory data to environmental conditions

  4. Utility of chromogenic in situ hybridization (CISH) for detection of EGFR amplification in glioblastoma: comparison with fluorescence in situ hybridization (FISH).

    Science.gov (United States)

    Fischer, Ingeborg; de la Cruz, Clarissa; Rivera, Andreana L; Aldape, Kenneth

    2008-12-01

    In this study, we test the reliability of chromogenic in situ hybridization (CISH) for the detection of epidermal growth factor receptor (EGFR) gene amplification in glioblastoma. Earlier reports have described EGFR CISH in glioblastoma multiforme, but a comparison of CISH with a "gold standard" testing method, such as fluorescence in situ hybridization (FISH), has not been described. Therapies targeting the EGFR-signaling pathway might increase the importance of assessment of EGFR-amplification status. CISH is a potential alternative to FISH as a testing method. To test its reliability, EGFR-amplification status by CISH was assessed in 89 cases of glioblastoma and compared with FISH results, and correlated with the protein expression using immunohistochemistry (IHC) for EGFR. FISH was scored as being EGFR-amplified in 47/89 tumors, CISH as being amplified in 43/89 tumors. The CISH and FISH results were in agreement in 83/89 cases (93%). Four glioblastomas were scored as being amplified by FISH, but not by CISH; whereas amplification was detected in 2 tumors by CISH that were not amplified using FISH. Forty-eight of the 89 cases were positive for EGFR expression by IHC. EGFR amplification was highly correlated with protein expression by IHC, as 40/48 (83%) EGFR IHC-positive cases were found to be EGFR-amplified. The high concordance of CISH and FISH for the assessment of EGFR gene-amplification status indicates that CISH is a viable alternative to FISH for the detection of EGFR gene amplification in glioblastoma. Detectable EGFR expression by IHC can occur in the absence of gene amplification, but is uncommon.

  5. Fluorescence in situ hybridization (CARD-FISH) of microorganisms in hydrocarbon contaminated aquifer sediment samples.

    Science.gov (United States)

    Tischer, Karolin; Zeder, Michael; Klug, Rebecca; Pernthaler, Jakob; Schattenhofer, Martha; Harms, Hauke; Wendeberg, Annelie

    2012-12-01

    Groundwater ecosystems are the most important sources of drinking water worldwide but they are threatened by contamination and overexploitation. Petroleum spills account for the most common source of contamination and the high carbon load results in anoxia and steep geochemical gradients. Microbes play a major role in the transformation of petroleum hydrocarbons into less toxic substances. To investigate microbial populations at the single cell level, fluorescence in situ hybridization (FISH) is now a well-established technique. Recently, however, catalyzed reporter deposition (CARD)-FISH has been introduced for the detection of microbes from oligotrophic environments. Nevertheless, petroleum contaminated aquifers present a worst case scenario for FISH techniques due to the combination of high background fluorescence of hydrocarbons and the presence of small microbial cells caused by the low turnover rates characteristic of groundwater ecosystems. It is therefore not surprising that studies of microorganisms from such sites are mostly based on cultivation techniques, fingerprinting, and amplicon sequencing. However, to reveal the population dynamics and interspecies relationships of the key participants of contaminant degradation, FISH is an indispensable tool. In this study, a protocol for FISH was developed in combination with cell quantification using an automated counting microscope. The protocol includes the separation and purification of microbial cells from sediment particles, cell permeabilization and, finally, CARD-FISH in a microwave oven. As a proof of principle, the distribution of Archaea and Bacteria was shown in 60 sediment samples taken across the contaminant plume of an aquifer (Leuna, Germany), which has been heavily contaminated with several ten-thousand tonnes of petroleum hydrocarbons since World War II. Copyright © 2012 Elsevier GmbH. All rights reserved.

  6. Evaluation of HER-2/neu status in breast cancer specimens using immunohistochemistry (IHC) & fluorescence in-situ hybridization (FISH) assay.

    Science.gov (United States)

    Goud, Kalal Iravathy; Dayakar, Seetha; Vijayalaxmi, Kolanupaka; Babu, Saidam Jangu; Reddy, P Vijay Anand

    2012-03-01

    Fluorescence in situ hybridization (FISH) is increasingly being recognized as the most accurate and predictive test for HER 2/neu gene amplification and response to therapy in breast cancer. In the present study we investigated HER-2/neu gene amplification by FISH in breast carcinoma tissue specimens and compared the results with that of immunohistochemical (IHC) analysis. A total of 90 breast carcinoma tissue samples were used for immunohistochemical (IHC) and FISH analysis. IHC was performed by using mouse monoclonal antibody to the intracellular domain of HER-2/neu protein. Each slide was scored in a blinded fashion by two pathologists according to the manufacturer's recommended criteria. FISH analysis was performed on paraffin embedded breast tumour tissue sections. The polysomy for centromere 17 (Spec green signal) was read as green signals less than 4 as moderate polysomy, and more than 4 as highly polysomy. Thirty of the 90 patients had negative results by IHC and FISH. Of the 28 patients with the score of 2+ by IHC, 20 were FISH positive for HER-2/neu gene amplification, three were FISH negative and five patients showed equivocal (1.8-2.2) results by FISH. These five cases were retested for IHC and FISH on different paraffin embedded tissue blocks, and all five were found positive for HER-2/neu gene amplification. Twenty five patients with the score of 3+ by IHC were FISH positive for HER-2/neu gene amplification (>2.2). Seven cases with the score of 3+ by IHC were FISH negative for HER-2/neu gene amplification (>2.2), and showed polysomy of chromosome number 17 high polysomy > 4. Our results indicated that HER-2/neu status by FISH should be performed in all cases of breast tumour with a 2+ score by IHC. Cases demonstrating a 3+ score by IHC may be subjected to FISH to rule out polysomy of chromosome 17 which could be falsely interpreted as HER-2/neu overexpression by IHC analysis. There is also a need for establishing a clinically validated cut-off value

  7. Introgressive hybridization as a promoter of genome reshuffling in natural homoploid fish hybrids (Cyprinidae, Leuciscinae)

    Czech Academy of Sciences Publication Activity Database

    Pereira, C. S.; Aboim, M. A.; Ráb, Petr; Collares-Pereira, M. J.

    2014-01-01

    Roč. 112, č. 3 (2014), s. 343-350 ISSN 0018-067X Institutional support: RVO:67985904 Keywords : comparative genome hybridization * hybrid zones * introgression Subject RIV: EG - Zoology Impact factor: 3.805, year: 2014

  8. Production of F1 interspecies hybrid offspring with cryopreserved sperm from a live-bearing fish, the swordtail Xiphophorus helleri.

    Science.gov (United States)

    Yang, Huiping; Hazlewood, Leona; Heater, Sheila J; Guerrero, Paula A; Walter, Ronald B; Tiersch, Terrence R

    2007-03-01

    Despite study of sperm cryopreservation in more than 200 fish species, production of broods from cryopreserved sperm in live-bearing fish has not been demonstrated. This has not been due to a lack of effort, but instead is a result of the unique morphology, biology, and biochemistry of reproduction in viviparous fishes. For example, sperm of Xiphophorus helleri have a cylindrical nucleus, can swim for days after being activated, have glycolytic capabilities, and can reside in the female reproduction tract for months before fertilization. These traits are not found in fishes with external fertilization. The long-standing research use of the genus Xiphophorus has led to development of over 60 pedigreed lines among the 26 species maintained around the world. These species and lines serve as contemporary models in medical research, although they must be maintained as live populations. Previous attempts at establishing sperm cryopreservation protocols for Xiphophorus have not produced live young. To address this we have been studying the parameters surrounding cryobiology of Xiphophorus sperm and applying this information to an improved understanding of internal fertilization and reproduction. Here we report the first successful fertilization and offspring production by cryopreserved sperm in any live-bearing fish. This claim is supported by our use of artificial insemination between two species that yield distinct hybrid offspring to verify paternity via cryopreserved sperm. We provide a practical approach for preservation of valuable genetic resources from live-bearing fish species, a group that is rapidly being lost due to destruction of native habitats.

  9. Metaphase FISH on a Chip: Miniaturized Microfluidic Device for Fluorescence in situ Hybridization

    Directory of Open Access Journals (Sweden)

    Niels Tommerup

    2010-11-01

    Full Text Available Fluorescence in situ Hybridization (FISH is a major cytogenetic technique for clinical genetic diagnosis of both inherited and acquired chromosomal abnormalities. Although FISH techniques have evolved and are often used together with other cytogenetic methods like CGH, PRINS and PNA-FISH, the process continues to be a manual, labour intensive, expensive and time consuming technique, often taking over 3–5 days, even in dedicated labs. We have developed a novel microFISH device to perform metaphase FISH on a chip which overcomes many shortcomings of the current laboratory protocols. This work also introduces a novel splashing device for preparing metaphase spreads on a microscope glass slide, followed by a rapid adhesive tape-based bonding protocol leading to rapid fabrication of the microFISH device. The microFISH device allows for an optimized metaphase FISH protocol on a chip with over a 20-fold reduction in the reagent volume. This is the first demonstration of metaphase FISH on a microfluidic device and offers a possibility of automation and significant cost reduction of many routine diagnostic tests of genetic anomalies.

  10. Fluorescence in situ hybridization techniques (FISH) to detect changes in CYP19a gene expression of Japanese medaka (Oryzias latipes)

    International Nuclear Information System (INIS)

    Park, June-Woo; Tompsett, Amber; Zhang, Xiaowei; Newsted, John L.; Jones, Paul D.; Au, Doris; Kong, Richard; Wu, Rudolf S.S.; Giesy, John P.; Hecker, Markus

    2008-01-01

    The aim of this study was to develop a sensitive in situ hybridization methodology using fluorescence-labeled riboprobes (FISH) that allows for the evaluation of gene expression profiles simultaneously in multiple target tissues of whole fish sections of Japanese medaka (Oryzias latipes). To date FISH methods have been limited in their application due to autofluorescence of tissues, fixatives or other components of the hybridization procedure. An optimized FISH method, based on confocal fluorescence microscopy was developed to reduce the autofluorescence signal. Because of its tissue- and gender-specific expression and relevance in studies of endocrine disruption, gonadal aromatase (CYP19a) was used as a model gene. The in situ hybridization (ISH) system was validated in a test exposure with the aromatase inhibitor fadrozole. The optimized FISH method revealed tissue-specific expression of the CYP19a gene. Furthermore, the assay could differentiate the abundance of CYP19a mRNA among cell types. Expression of CYP19a was primarily associated with early stage oocytes, and expression gradually decreased with increasing maturation. No expression of CYP19a mRNA was observed in other tissues such as brain, liver, or testes. Fadrozole (100 μg/L) caused up-regulation of CYP19a expression, a trend that was confirmed by RT-PCR analysis on excised tissues. In a combination approach with gonad histology, it could be shown that the increase in CYP19a expression as measured by RT-PCR on a whole tissue basis was due to a combination of both increases in numbers of CYP19a-containing cells and an increase in the amount of CYP19a mRNA present in the cells

  11. Determination of the ruminant origin of bone particles using fluorescence in situ hybridization (FISH).

    Science.gov (United States)

    Lecrenier, M C; Ledoux, Q; Berben, G; Fumière, O; Saegerman, C; Baeten, V; Veys, P

    2014-07-17

    Molecular biology techniques such as PCR constitute powerful tools for the determination of the taxonomic origin of bones. DNA degradation and contamination by exogenous DNA, however, jeopardise bone identification. Despite the vast array of techniques used to decontaminate bone fragments, the isolation and determination of bone DNA content are still problematic. Within the framework of the eradication of transmissible spongiform encephalopathies (including BSE, commonly known as "mad cow disease"), a fluorescence in situ hybridization (FISH) protocol was developed. Results from the described study showed that this method can be applied directly to bones without a demineralisation step and that it allows the identification of bovine and ruminant bones even after severe processing. The results also showed that the method is independent of exogenous contamination and that it is therefore entirely appropriate for this application.

  12. Does interspecies hybridization affect the host specificity of parasites in cyprinid fish?

    Czech Academy of Sciences Publication Activity Database

    Šimková, A.; Dávidová, M.; Papoušek, Ivo; Vetešník, Lukáš

    2013-01-01

    Roč. 6, č. 95 (2013), s. 95 ISSN 1756-3305 R&D Projects: GA ČR GAP505/12/0375 Institutional support: RVO:68081766 Keywords : Cyprinid fish * Interspecies hybridization * Metazoan parasites * Monogenea * Host specificity Subject RIV: EG - Zoology Impact factor: 3.251, year: 2013

  13. Behavioural isolation may facilitate homoploid hybrid speciation in cichlid fish

    NARCIS (Netherlands)

    Selz, O. M.; Thommen, R.; Maan, M. E.; Seehausen, O.

    Hybrid speciation is constrained by the homogenizing effects of gene flow from the parental species. In the absence of post-mating isolation due to structural changes in the genome, or temporal or spatial premating isolation, another form of reproductive isolation would be needed for homoploid

  14. When biogeographical provinces collide: Hybridization of reef fishes at the crossroads of marine biogeographical provinces in the Arabian Sea

    KAUST Repository

    DiBattista, Joseph

    2015-04-01

    Aim: Suture zones are areas where closely related species from different biogeographical regions come into contact and interbreed. This concept originated from the study of terrestrial ecosystems but it remains unclear whether a similar phenomenon occurs in the marine environment. Here we investigate a potential suture zone from a previously unknown hybrid hotspot at the Socotra Archipelago (Yemen), located in the Arabian Sea, where fauna from the Red Sea, Gulf of Aden, Arabian Sea, western Indian Ocean and greater Indo-Polynesian Province intersect. Location: Red Sea, Gulf of Aden, Arabian Sea and Indian Ocean. Methods: Putative hybrid reef fish were identified based on intermediate coloration and morphology. Underwater observations and collections were conducted to determine: (1) whether parent species form heterospecific social groups or breeding pairs; (2) the sex and reproductive status of morphologically intermediate individuals; and (3) whether parent species were forming mixed species associations owing to a dearth of conspecific partners. To support hybrid status, morphologically intermediate and parental individuals were genotyped using mitochondrial DNA cytochrome c oxidase subunit I (COI), nuclear recombination-activating gene 2 (RAG2) and the nuclear TMO-4C4 (TMO) gene. Results: We observed putative hybrids involving 14 species from four reef fish families at Socotra. Most cases involved a parental species with a restricted distribution (e.g. Red Sea or Arabian Sea) and a broadly distributed Indo-Pacific species. In most cases, at least one of the parent species was rare at Socotra. Hybrid gene flow was largely unidirectional, and although introgression was rare, we found evidence that some butterflyfish and surgeonfish hybrids were fertile and formed breeding groups with parental species. Main conclusions: The rate of hybrid discovery at Socotra is much greater than that recorded elsewhere in the marine environment and involved both allopatric and

  15. Fluorescent in situ hybridization (FISH as a diagnostic tool for Williams-Beuren syndrome

    Directory of Open Access Journals (Sweden)

    Deise Helena de Souza

    2007-01-01

    Full Text Available Fluorescent in situ hybridization (FISH with commercial probes covering the elastin gene (ELN was used to determine the frequency of the 7q11.23 deletion in 18 children clinically diagnosed with Williams-Beuren syndrome (WBS. A de novo deletion was detected in 15 of the children (83%. Diagnostic investigation for WBS started late in childhood (median = 5.8 years. All the children showed facial features typical of the syndrome, mental retardation and developmental delay. Over-friendliness was observed in the majority of cases. Clinodactyly of the 5th finger (n = 13, cardiovascular disease (n = 9, loquacity (n = 9, low birthweight (n = 8, and failure to thrive (n = 9 were observed only in those children with the deletion. Respiratory problems (n = 9, though not previously reported in the literature, was a common finding in the group studied. Our results confirmed that FISH is useful in identifying 7q11.23 deletions in cases of WBS. Clinical manifestations were more evident in the deletion-positive children.

  16. Diagnostic and Prognostic Utility of Fluorescence In situ Hybridization (FISH) Analysis in Acute Myeloid Leukemia.

    Science.gov (United States)

    Gonzales, Patrick R; Mikhail, Fady M

    2017-12-01

    Acute myeloid leukemia (AML) is a hematologic neoplasia consisting of incompletely differentiated hematopoietic cells of the myeloid lineage that proliferate in the bone marrow, blood, and/or other tissues. Clinical implementation of fluorescence in situ hybridization (FISH) in cytogenetic laboratories allows for high-resolution analysis of recurrent structural chromosomal rearrangements specific to AML, especially in AML with normal karyotypes, which comprises approximately 33-50% of AML-positive specimens. Here, we review the use of several FISH probe strategies in the diagnosis of AML. We also review the standards and guidelines currently in place for use by clinical cytogenetic laboratories in the evaluation of AML. Updated standards and guidelines from the WHO, ACMG, and NCCN have further defined clinically significant, recurring cytogenetic anomalies in AML that are detectable by FISH. FISH continues to be a powerful technique in the diagnosis of AML, with higher resolution than conventional cytogenetic analysis, rapid turnaround time, and a considerable diagnostic and prognostic utility.

  17. Application of hybrid artificial fish swarm algorithm based on similar fragments in VRP

    Science.gov (United States)

    Che, Jinnuo; Zhou, Kang; Zhang, Xueyu; Tong, Xin; Hou, Lingyun; Jia, Shiyu; Zhen, Yiting

    2018-03-01

    Focused on the issue that the decrease of convergence speed and the precision of calculation at the end of the process in Artificial Fish Swarm Algorithm(AFSA) and instability of results, a hybrid AFSA based on similar fragments is proposed. Traditional AFSA enjoys a lot of obvious advantages in solving complex optimization problems like Vehicle Routing Problem(VRP). AFSA have a few limitations such as low convergence speed, low precision and instability of results. In this paper, two improvements are introduced. On the one hand, change the definition of the distance for artificial fish, as well as increase vision field of artificial fish, and the problem of speed and precision can be improved when solving VRP. On the other hand, mix artificial bee colony algorithm(ABC) into AFSA - initialize the population of artificial fish by the ABC, and it solves the problem of instability of results in some extend. The experiment results demonstrate that the optimal solution of the hybrid AFSA is easier to approach the optimal solution of the standard database than the other two algorithms. In conclusion, the hybrid algorithm can effectively solve the problem that instability of results and decrease of convergence speed and the precision of calculation at the end of the process.

  18. Design of Hybrid Solar and Wind Energy Harvester for Fishing Boat

    Science.gov (United States)

    Banjarnahor, D. A.; Hanifan, M.; Budi, E. M.

    2017-07-01

    In southern beach of West Java, Indonesia, there are many villagers live as fishermen. They use small boats for fishing, in one to three days. Therefore, they need a fish preservation system. Fortunately, the area has high potential of solar and wind energy. This paper presents the design of a hybrid solar and wind energy harvester to power a refrigerator in the fishing boat. The refrigerator should keep the fish in 2 - 4 °C. The energy needed is 720 Wh daily. In the area, the daily average wind velocity is 4.27 m/s and the sun irradiation is 672 W/m2. The design combined two 100W solar panels and a 300W wind turbine. The testing showed that the solar panels can harvest 815 - 817 Wh of energy, while the wind turbine can harvest 43 - 62 Wh of energy daily. Therefore, the system can fulfil the energy requirement in fishing boat, although the solar panels were more dominant. To install the wind turbine on the fishing-boat, a computational design had been conducted. The boat hydrostatic dimension was measured to determine its stability condition. To reach a stable equilibrium condition, the wind turbine should be installed no more than 1.7 m of height.

  19. THYROCALCITONIN STUDIES IN ELASMOBRANCH FISH ...

    African Journals Online (AJOL)

    P. D. STAHL AND A. D. KENNY. Department Pharmacology and Space Sciences Research Centre,. University of Missouri, Columbia, Mo. INTRODUCTION. We recently reported a hypocalcaemic and hypophosphataemic action of mammalian thyro- caltitonin in the teleost fish Ictalurus melas (Louw, Sutton and Kenny 1967) ...

  20. Utility and impact of early t(15;17) identification by Fluorescence In Situ Hybridization (FISH) in clinical decision making for patients in Acute Promyelocytic Leukemia (APL).

    Science.gov (United States)

    Kolhe, R; Mangaonkar, A; Mansour, J; Clemmons, A; Shaw, J; Dupont, B; Walczak, L; Mondal, A; Rojiani, A; Jillella, A; Kota, V

    2015-08-01

    Acute Promyelocytic Leukemia (APL) is a curable malignancy with studies showing above 90% survival. However, population-based studies looking at survival suggest that approximately 30% of patients with APL die during induction. Early demonstration of t(15;17) will lead to accurate decision making regarding treatment. The aim of this project was to validate earlier time frames for the Abbott Molecular Vysis LSI promyelocytic leukemia (PML)/ retinoic acid receptor alpha (RARA) fluorescence in situ hybridization (FISH) probe (ASR 6-16 h). Twenty patients (15 APL cases and five non-APL cases) were selected for validating various hybridization times for the FISH probe. Expected normal signal pattern was two red and two green signals (2R2G), and the most common expected abnormal signal pattern was two fusion (yellow) signals, one red and one green (2F1R1G) and/or one fusion, one red and one green (1F1R1G). The specificity of the probe ranged from 84% at 2 h, 86% at 4 h, 84% at 6 h, and 87% for overnight hybridization. The sensitivity increased from 79% at 2 h, 80% at 4 h, 81% at 6 h to 87% for overnight hybridization. Based on the validation studies, we recommend reading of FISH results at the 4-h incubation mark for a preliminary diagnosis and confirmation with overnight hybridization. © 2015 John Wiley & Sons Ltd.

  1. Application of Fluorescence In Situ Hybridization (FISH) Technique for the Detection of Genetic Aberration in Medical Science

    OpenAIRE

    Ratan, Zubair Ahmed; Zaman, Sojib Bin; Mehta, Varshil; Haidere, Mohammad Faisal; Runa, Nusrat Jahan; Akter, Nasrin

    2017-01-01

    Fluorescence in situ hybridization (FISH) is a macromolecule recognition technique, which is considered as a new advent in the field of cytology.?Initially, it was developed as a physical mapping tool to delineate genes within chromosomes. The accuracy and versatility of FISH were subsequently capitalized upon in biological and medical research. This visually appealing technique provides an intermediate degree of resolution between DNA analysis and chromosomal investigations. FISH consists of...

  2. Marianas Boat Fishing Cost Earnings Study 2011

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data represent a cost-earnings study of the boat based fishing in the Mariana Archipelago fielded in 2011. Data collected include fisher classification, vessel...

  3. Mirror hybrid reactor optimization studies

    International Nuclear Information System (INIS)

    Bender, D.J.

    1976-01-01

    A system model of the mirror hybrid reactor has been developed. The major components of the model include (1) the reactor description, (2) a capital cost analysis, (3) various fuel management schemes, and (4) an economic analysis that includes the hybrid plus its associated fission burner reactors. The results presented describe the optimization of the mirror hybrid reactor, the objective being to minimize the cost of electricity from the hybrid fission-burner reactor complex. We have examined hybrid reactors with two types of blankets, one containing natural uranium, the other thorium. The major difference between the two optimized reactors is that the uranium hybrid is a significant net electrical power producer, whereas the thorium hybrid just about breaks even on electrical power. Our projected costs for fissile fuel production are approximately 50 $/g for 239 Pu and approximately 125 $/g for 233 U

  4. Intragenus (Campylomormyrus) and intergenus hybrids in mormyrid fish: Physiological and histological investigations of the electric organ ontogeny.

    Science.gov (United States)

    Kirschbaum, Frank; Nguyen, Linh; Baumgartner, Stephanie; Chi, Hiu Wan Linda; Wolfart, Rene; Elarbani, Khouloud; Eppenstein, Hari; Korniienko, Yevheniia; Guido-Böhm, Lilian; Mamonekene, Victor; Vater, Marianne; Tiedemann, Ralph

    2016-10-01

    African weakly electric mormyrid fish show a high diversity of their electric organ discharge (EOD) both across and within genera. Thanks to a recently developed technique of artificial reproduction in mormyrid fish, we were able to perform hybridizations between different genera and within one genus (Campylomormyrus). The hybrids of intergenus hybridizations exhibited different degrees of reduced survival related to the phylogenetic distance of the parent species: hybrids of the crosses between C. rhynchophorus and its sister genus Gnathonemus survived and developed normally. Hybrids between C. rhynchophorus and a Mormyrus species (a more basal clade compared to Campylomormyrus s) survived up to 42days and developed many malformations, e.g., at the level of the unpaired fins. Hybrids between C. numenius and Hippopotamyrus pictus (a derived clade, only distantly related to Campylomormyrus) only survived for two days during embryological development. Eight different hybrid combinations among five Campylomormyrus species (C. tamandua, C. compressirostris, C. tshokwe, C. rhynchophorus, C. numenius) were performed. The aim of the hybridizations was to combine species with (1) either caudal or rostral position of the main stalk innervating the electrocytes in the electric organ and (2) short, median or long duration of their EOD. The hybrids, though they are still juveniles, show very interesting features concerning electrocyte geometry as well as EOD form and duration: the caudal position of the stalk is prevailing over the rostral position, and the penetration of the stalk is dominant over the non-penetrating feature (in the Campylomormyrus hybrids); in the hybrid between C. rhynchophorus and Gnathonemus petersii it is the opposite. When crossing species with long and short EODs, it is always the long duration EOD that is expressed in the hybrids. The F1-Hybrids of the cross C. tamandua×C. compressirostris are fertile: viable F2-fish could be obtained with artificial

  5. Visualization of mcr mRNA in a methanogen by fluorescence in situ hybridization with an oligonucleotide probe and two-pass tyramide signal amplification (two-pass TSA-FISH).

    Science.gov (United States)

    Kubota, Kengo; Ohashi, Akiyoshi; Imachi, Hiroyuki; Harada, Hideki

    2006-09-01

    Two-pass tyramide signal amplification-fluorescence in situ hybridization (two-pass TSA-FISH) with a horseradish peroxidase (HRP)-labeled oligonucleotide probe was applied to detect prokaryotic mRNA. In this study, mRNA of a key enzyme for methanogenesis, methyl coenzyme M reductase (mcr), in Methanococcus vannielii was targeted. Applicability of mRNA-targeted probes to in situ hybridization was verified by Clone-FISH. It was observed that sensitivity of two-pass TSA-FISH was significantly higher than that of TSA-FISH, which was further increased by the addition of dextran sulphate in TSA working solution. Signals from two-pass TSA-FISH were more reliable compared to the weak, spotty signals yielded by TSA-FISH.

  6. EGFR status in oral squamous cell carcinoma: comparing immunohistochemistry, FISH and CISH detection in a case series study

    OpenAIRE

    Bernardes, Vanessa F?tima; Gleber-Netto, Frederico Omar; de Sousa, S?lvia Ferreira; Rocha, Rafael Malagoli; de Aguiar, Maria C?ssia Ferreira

    2013-01-01

    Objectives To compare the immunohistochemistry (IHC) expression of epidermal growth factor receptor (EGFR) in oral squamous cell carcinomas (OSCC) with the gene amplification evaluated by fluorescence in situ hybridization (FISH) and chromogenic in situ hybridization (CISH) and their association with clinicopathological parameters. Additionally, we tested the sensibility and specificity of CISH in comparison with FISH. Design Case series study Setting Oral surgery and pathology department in ...

  7. Analysis of Single-cell Gene Transcription by RNA Fluorescent In Situ Hybridization (FISH)

    DEFF Research Database (Denmark)

    Ronander, Elena; Bengtsson, Dominique C; Joergensen, Louise

    2012-01-01

    Adhesion of Plasmodium falciparum infected erythrocytes (IE) to human endothelial receptors during malaria infections is mediated by expression of PfEMP1 protein variants encoded by the var genes. The haploid P. falciparum genome harbors approximately 60 different var genes of which only one has...... been believed to be transcribed per cell at a time during the blood stage of the infection. How such mutually exclusive regulation of var gene transcription is achieved is unclear, as is the identification of individual var genes or sub-groups of var genes associated with different receptors...... fluorescent in situ hybridization (FISH) analysis of var gene transcription by the parasite in individual nuclei of P. falciparum IE(1). Here, we present a detailed protocol for carrying out the RNA-FISH methodology for analysis of var gene transcription in single-nuclei of P. falciparum infected human...

  8. Combined fluorescence in situ hybridization and microautoradiography (FISH-MAR)

    International Nuclear Information System (INIS)

    Ginige, M.P.

    2005-01-01

    Cultivation independent studies have revealed, that due to the complexity of natural ecosystems such as activated sludge, rhizosphere, rumen etc., the pure cultivation of all related micro-organisms in these diverse ecosystems is quite unsuccessful. Accordingly, the small subunit ribosomal RNA (SSU rRNA, i.e. 16S and 18S rRNA) or genes, obtained from these ecosystems without cultivation has become a widely accepted approach to describe the phylogenetic diversity of microbial communities present in these ecosystems. The rapid growth of the rRNA gene (rDNA) sequence data bank, accessible via the Internet (http://www.ncbi.nlm.nih.gov/BLAST/) has enabled us to compare microbial diversities across the globe without cultivation. However, these rRNA gene sequences provide very few direct clues regarding the interactions and the metabolic capabilities of the identified micro-organisms. Accordingly, the knowledge available on the in situ physiology of the inhabitants of most microbial ecosystems is quite remote and the availability of such knowledge will enable our ability to manipulate ecosystems (e.g. activated sludge) to achieve better process performances with the aid of improved mathematical models. In both natural and engineered systems, there are a diverse group of microorganisms cohabiting within matrix-encloses such as bio-films or flocs rather than single planktonic cells. In order to manipulate these systems to obtain higher productivity, it is important to understand population structure, dynamics, functionality and also special distributions in the matrix-encloses. It is an accepted fact that pure cultivation of micro-organisms in these complex ecosystems does not permit to resolve any of the above mentioned issues since (1) rigorous biomass disaggregation which is a common practice in cultivation-based approaches results in a loss of special information; (2) cultivation approaches also introduces significant biases resulting in pronounced population shifts

  9. Filter-Adapted Fluorescent In Situ Hybridization (FA-FISH) for Filtration-Enriched Circulating Tumor Cells.

    Science.gov (United States)

    Oulhen, Marianne; Pailler, Emma; Faugeroux, Vincent; Farace, Françoise

    2017-01-01

    Circulating tumor cells (CTCs) may represent an easily accessible source of tumor material to assess genetic aberrations such as gene-rearrangements or gene-amplifications and screen cancer patients eligible for targeted therapies. As the number of CTCs is a critical parameter to identify such biomarkers, we developed fluorescent in situ hybridization (FISH) for CTCs enriched on filters (filter-adapted-FISH, FA-FISH). Here, we describe the FA-FISH protocol, the combination of immunofluorescent staining (DAPI/CD45) and FA-FISH techniques, as well as the semi-automated microscopy method that we developed to improve the feasibility and reliability of FISH analyses in filtration-enriched CTC.

  10. 2010 Great Lakes Human Health Fish Tissue Study Fish Tissue Data Dictionary

    Science.gov (United States)

    The Office of Science and Technology (OST) is providing the fish tissue results from the 2010 Great Lakes Human Health Fish Tissue Study (GLHHFTS). This document includes the “data dictionary” for Mercury, PFC, PBDE and PCBs.

  11. A simple protocol for attenuating the auto-fluorescence of cyanobacteria for optimized fluorescence in situ hybridization (FISH) imaging.

    Science.gov (United States)

    Zeller, Perrine; Ploux, Olivier; Méjean, Annick

    2016-03-01

    Cyanobacteria contain pigments, which generate auto-fluorescence that interferes with fluorescence in situ hybridization (FISH) imaging of cyanobacteria. We describe simple chemical treatments using CuSO4 or H2O2 that significantly reduce the auto-fluorescence of Microcystis strains. These protocols were successfully applied in FISH experiments using 16S rRNA specific probes and filamentous cyanobacteria. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. Validation of interphase fluorescence in situ hybridization (iFISH for multiple myeloma using CD138 positive cells

    Directory of Open Access Journals (Sweden)

    Renata Kiyomi Kishimoto

    2016-06-01

    Full Text Available ABSTRACT BACKGROUND: Multiple myeloma is a plasma cell neoplasm with acquired genetic abnormalities of clinical and prognostic importance. Multiple myeloma differs from other hematologic malignancies due to a high fraction of low proliferating malignant plasma cells and the paucity of plasma cells in bone marrow aspiration samples, making cytogenetic analysis a challenge. An abnormal karyotype is found in only one-third of patients with multiple myeloma and interphase fluorescence in situ hybridization is the most useful test for studying the chromosomal abnormalities present in almost 90% of cases. However, it is necessary to study the genetic abnormalities in plasma cells after their identification or selection by morphology, immunophenotyping or sorting. Other challenges are the selection of the most informative FISH panel and determining cut-off levels for FISH probes. This study reports the validation of interphase fluorescence in situ hybridization using CD138 positive cells, according to proposed guidelines published by the European Myeloma Network (EMN in 2012. METHOD: Bone marrow samples from patients with multiple myeloma were used to standardize a panel of five probes [1q amplification, 13q14 deletion, 17p deletion, t(4;14, and t(14;16] in CD138+ cells purified by magnetic cell sorting. RESULTS: This test was validated with a low turnaround time and good reproducibility. Five of six samples showed genetic abnormalities. Monosomy/deletion 13 plus t(4;14 were found in two cases. CONCLUSION: This technique together with magnetic cell sorting is effective and can be used in the routine laboratory practice. In addition, magnetic cell sorting provides a pure plasma cell population that allows other molecular and genomic studies.

  13. mathFISH, a web tool that uses thermodynamics-based mathematical models for in silico evaluation of oligonucleotide probes for fluorescence in situ hybridization.

    Science.gov (United States)

    Yilmaz, L Safak; Parnerkar, Shreyas; Noguera, Daniel R

    2011-02-01

    Mathematical models of RNA-targeted fluorescence in situ hybridization (FISH) for perfectly matched and mismatched probe/target pairs are organized and automated in web-based mathFISH (http://mathfish.cee.wisc.edu). Offering the users up-to-date knowledge of hybridization thermodynamics within a theoretical framework, mathFISH is expected to maximize the probability of success during oligonucleotide probe design.

  14. Feasibility of using fluorescence in situ hybridization (FISH) to detect early gene changes in sputum cells from uranium miners

    Energy Technology Data Exchange (ETDEWEB)

    Neft, R.E.; Rogers, J.L.; Belinsky, S.A. [and others

    1995-12-01

    Epidemiological studies have shown that combined exposure to radon progeny and tobacco smoke produce a greater than additive or synergistic increase in lung cancer risk. Lung cancer results from multiple genetic changes over a long period of time. An early change that occurs in lung cancer is trisomy 7 which is found in 50% of non-small cell lung cancer and in the far margins of resected lung tumors. The 80% mortality associated with lung cancer is in part related to the high proportion of patients who present with an advanced, unresectable tumor. Therefore, early detection of patients at risk for tumor development is critical to improve treatment of this disease. Currently, it is difficult to detect lung cancer early while it is still amendable by surgery. Saccomanno, G. has shown that premalignant cytologic changes in sputum cells collected from uranium miners can be detected by a skilled, highly trained cytopathologist. A more objective alternative for identifying premalignant cells in sputum may be to determine whether an early genetic change such as trisomy 7 is present in these cells. Fluorescence in situ hybridization (FISH) can be used to identify cells with trisomy 7. The results of this investigation indicate that FISH may prove to be an accurate, efficient method to test at-risk individuals for genetic alterations in bronchial epithelial cells from sputum.

  15. Feasibility of using fluorescence in situ hybridization (FISH) to detect early gene changes in sputum cells from uranium miners

    International Nuclear Information System (INIS)

    Neft, R.E.; Rogers, J.L.; Belinsky, S.A.

    1995-01-01

    Epidemiological studies have shown that combined exposure to radon progeny and tobacco smoke produce a greater than additive or synergistic increase in lung cancer risk. Lung cancer results from multiple genetic changes over a long period of time. An early change that occurs in lung cancer is trisomy 7 which is found in 50% of non-small cell lung cancer and in the far margins of resected lung tumors. The 80% mortality associated with lung cancer is in part related to the high proportion of patients who present with an advanced, unresectable tumor. Therefore, early detection of patients at risk for tumor development is critical to improve treatment of this disease. Currently, it is difficult to detect lung cancer early while it is still amendable by surgery. Saccomanno, G. has shown that premalignant cytologic changes in sputum cells collected from uranium miners can be detected by a skilled, highly trained cytopathologist. A more objective alternative for identifying premalignant cells in sputum may be to determine whether an early genetic change such as trisomy 7 is present in these cells. Fluorescence in situ hybridization (FISH) can be used to identify cells with trisomy 7. The results of this investigation indicate that FISH may prove to be an accurate, efficient method to test at-risk individuals for genetic alterations in bronchial epithelial cells from sputum

  16. Evaluation of hybrid neutralization/biosorption process for zinc ions removal from automotive battery effluent by dolomite and fish scales.

    Science.gov (United States)

    Ribeiro, C; Scheufele, F B; Alves, H J; Kroumov, A D; Espinoza-Quiñones, F R; Módenes, A N; Borba, C E

    2018-02-26

    This work focused in the evaluation of Oreochromis niloticus fish scales (FS) as biosorbent material in the removal of Zn from a synthetic effluent based on automotive battery industry effluent and, further, a hybrid neutralization/biosorption process, aiming at a high-quality treated effluent, by a cooperative use of dolomite and FS. For this, a physicochemical and morphological characterization (i.e. SEM-EDX, FTIR, XRD, and TXRF) was performed, which helped to clarify a great heterogeneity of active sites (phosphate, carbonate, amide, and hydroxyl) on the biosorbent; also the inorganic constituents (apatites) leaching from the FS was identified. Biosorption results pointed out to a pH-dependent process due to changes in the functional group's anionic character (i.e. electrostatic interactions), where an initial pH = 3 favored the Zn uptake. Kinetic and equilibrium studies confirmed the heterogeneous surface and cooperative sorption, wherein experimental data were described by Generalized Elovich kinetic model and the favorable isotherm profile by Langmuir-Freundlich isotherm ([Formula: see text] = 15.38 mg g -1 and [Formula: see text]). Speciation diagram of Zn species along with the leached species demonstrated that, for the studied pH range, the biosorption was the most likely phenomena rather than precipitation. Finally, the hybrid neutralization/biosorption process showed great potential since both the Zn concentration levels and the pH reached the legislation standards (C Zn  = 4 mg L -1 ; pH = 5). Hence, based on the characterization and biosorption results, a comprehensive evaluation of the involved mechanisms in such complex system helped to verify the prospective of FS biosorbent for the Zn treatment from solution, in both individual and hybrid processes.

  17. Identification And Study Of Fish Species In Karkheh River (Iran

    Directory of Open Access Journals (Sweden)

    Khoshnood Zahra

    2014-10-01

    Full Text Available For the investigation of fish from Karkheh River, sampling was performed in a six month period from August 2014 to January 2015. All sampled fish were measured for biometrical values (length and weight. General results of the sampling and identification of the fish showed the presence of 14 species from four fish families of Cyprinidae, Mugilidae, Siluridae and Macrostomidae, out of which the Cyprinidae family were the most frequent of the sampled fish. The most significant abundance belongs to Cyprinus carpio. The fish sampled in the present study were: Liza abu, Ctenopharyngodon idella, Barbel sp., Cyprinion macrostomum, Barbus sharpeyi, Hypophthalmichthys molitrix, Barbus esocinus, Barbus barbulus, Barbus luteus, Barbus grypus, Cyprinus carpio, Silurus triostegus, Mastacembelus circumcinctus and Capoeta trutta. Shannon Index results showed that the fish biodiversity in the studyed area followed a uniform path and additionally that the considered area at the studied period has good fish biodiversity.

  18. Chromogenic in situ hybridization (CISH) to detect HER2 gene amplification in breast and gastric cancer: comparison with immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH).

    Science.gov (United States)

    Kiyose, Shinichiro; Igarashi, Hisaki; Nagura, Kiyoko; Kamo, Takaharu; Kawane, Kazunori; Mori, Hiroki; Ozawa, Takachika; Maeda, Matsuyoshi; Konno, Keisuke; Hoshino, Hideaki; Konno, Hiroyuki; Ogura, Hiroyuki; Shinmura, Kazuya; Hattori, Naohiko; Sugimura, Haruhiko

    2012-11-01

    The chromogenic in situ hybridization (CISH) assay, designed to detect the amplification of the HER2 gene in formalin-fixed, paraffin-embedded (FFPE) breast cancer (BC) and gastric cancer (GC) tissue specimens, was evaluated in 125 FFPE BC cases and 198 FFPE GC cases for which the HER2 status had been predetermined using immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). In the 125 BC cases and the 198 gastric cases, we found a very good concordance (98.4% and 99.0%, respectively) between CISH and FISH. In particular, we evaluated the polysomy cases, as these cases often have ambiguous treatment options in clinical practice. The polysomy of chromosome 17 was defined as the presence of three or more CEP17 signals in at least 10% of the tumor cells. In the 50 BC cases and 54 GC cases displaying chromosome 17 polysomy, the concordance between FISH and CISH was 98.0% and 98.1%, respectively. These results indicate that CISH could provide an accurate and practical alternative to FISH for the clinical diagnosis of HER2 gene amplification in FFPE BC and FFPE GC samples. © 2012 The Authors. Pathology International © 2012 Japanese Society of Pathology and Wiley Publishing Asia Pty Ltd.

  19. Radiation disinfestation studies on sun dried fish

    International Nuclear Information System (INIS)

    Ahmed, M.; Bhuiya, A.D.; Alam, M.S.; Huda, S.M.S.

    1989-01-01

    A large quantity of dried fish is lost in Bangladesh due to infestation by earwigs, hide beetles and copra beetles in storage godowns. The most destructive pest is the hide beetle, Dermestes maculatus Deg. Earwigs of different developmental stages were exposed to 0.10, 0.20 or 0.30 kGy of gamma rays for disinfestation. There was apparent damage to the control but all treated samples were in good condition and no live insect was observed 3 weeks after starting the experiment. Disinfestation studies of dried mackerel showed that eggs, larval and pupal stages of hide beetles could be inactivated at a dose of 0.20 kGy. A dose of 0.30 kGy killed all adults 2 weeks after irradiation. In the packaging studies, dried mackerel was packed in polythene pouches of different thicknesses. Two controls were maintained, i.e. dried fish with no treatment, control, and dried fish disinfested with heat at 60 deg. C, disinfested control. In experiments with 50 μm thick polythene pouches, the dried fish of irradiation treatments with 0.10 to 1.0 kGy doses and the controls had around 20% moisture content with the exception of disinfested controls which had 13% moisture content. All irradiated samples were free from insect damage. There was heavy damage in the controls due to insects. However, all these treated fish had heavy fungal growth with the exception of the disinfested control. Similar results were obtained with pouches made of 75 μm thick polythene irradiated at doses of 0.50, 1.0, 2.0 and 4.0 kGy. In the final experiments pouches were made of 50, 75 and 100 μm thick polythene and exposed to similar radiation as in the previous experiment. In all the treatments, moisture content was reduced to 13%. heavy insect damage was observed in the control, while all the treated samples were in excellent condition after 5 months of storage. (author). 20 refs, 2 figs, 5 tabs

  20. Application of Fluorescence In Situ Hybridization (FISH) Technique for the Detection of Genetic Aberration in Medical Science

    Science.gov (United States)

    Ratan, Zubair Ahmed; Zaman, Sojib Bin; Haidere, Mohammad Faisal; Runa, Nusrat Jahan; Akter, Nasrin

    2017-01-01

    Fluorescence in situ hybridization (FISH) is a macromolecule recognition technique, which is considered as a new advent in the field of cytology. Initially, it was developed as a physical mapping tool to delineate genes within chromosomes. The accuracy and versatility of FISH were subsequently capitalized upon in biological and medical research. This visually appealing technique provides an intermediate degree of resolution between DNA analysis and chromosomal investigations. FISH consists of a hybridizing DNA probe, which can be labeled directly or indirectly. In the case of direct labeling, fluorescent nucleotides are used, while indirect labeling is incorporated with reporter molecules that are subsequently detected by fluorescent antibodies or other affinity molecules. FISH is applied to detect genetic abnormalities that include different characteristic gene fusions or the presence of an abnormal number of chromosomes in a cell or loss of a chromosomal region or a whole chromosome. It is also applied in different research applications, such as gene mapping or the identification of novel oncogenes. This article reviews the concept of FISH, its application, and its advantages in medical science.  PMID:28690958

  1. Radiologic contamination of fish. III. Radiochemical studies of contaminated fish

    Energy Technology Data Exchange (ETDEWEB)

    Kawabata, T

    1955-01-01

    The decay rate of the radioactivity of the organs of fish caught by the crew of the Shunkotsu Maru was measured. After 3 months, the spleens, kidneys, and gonads retained considerable radioactivity, suggesting the presence of long-lived radioactive elements. At the end of this time, the liver and other organs retained only about 10% of the initial radioactivity and the bile had lost most of its activity. The retention by the pyloric coeca and the intestinal contents varied considerably and was probably dependent on the food consumed. Absorption of the ash of the organs on Dowex 50 and elution located most of the activity in the fractions eluted with 0.5% oxalic acid and 5% citrate buffers of pH 4.1 and 4.6. Qualitative separation with carriers identified the main radioactive element of the citrate buffer, pH 4.1, eluate as /sup 65/Zn.

  2. Asexual Reproduction Does Not Apparently Increase the Rate of Chromosomal Evolution: Karyotype Stability in Diploid and Triploid Clonal Hybrid Fish (Cobitis, Cypriniformes, Teleostei).

    Science.gov (United States)

    Majtánová, Zuzana; Choleva, Lukáš; Symonová, Radka; Ráb, Petr; Kotusz, Jan; Pekárik, Ladislav; Janko, Karel

    2016-01-01

    Interspecific hybridization, polyploidization and transitions from sexuality to asexuality considerably affect organismal genomes. Especially the last mentioned process has been assumed to play a significant role in the initiation of chromosomal rearrangements, causing increased rates of karyotype evolution. We used cytogenetic analysis and molecular dating of cladogenetic events to compare the rate of changes of chromosome morphology and karyotype in asexually and sexually reproducing counterparts in European spined loach fish (Cobitis). We studied metaphases of three sexually reproducing species and their diploid and polyploid hybrid clones of different age of origin. The material includes artificial F1 hybrid strains, representatives of lineage originated in Holocene epoch, and also individuals of an oldest known age to date (roughly 0.37 MYA). Thereafter we applied GISH technique as a marker to differentiate parental chromosomal sets in hybrids. Although the sexual species accumulated remarkable chromosomal rearrangements after their speciation, we observed no differences in chromosome numbers and/or morphology among karyotypes of asexual hybrids. These hybrids possess chromosome sets originating from respective parental species with no cytogenetically detectable recombinations, suggesting their integrity even in a long term. The switch to asexual reproduction thus did not provoke any significant acceleration of the rate of chromosomal evolution in Cobitis. Asexual animals described in other case studies reproduce ameiotically, while Cobitis hybrids described here produce eggs likely through modified meiosis. Therefore, our findings indicate that the effect of asexuality on the rate of chromosomal change may be context-dependent rather than universal and related to particular type of asexual reproduction.

  3. Asexual Reproduction Does Not Apparently Increase the Rate of Chromosomal Evolution: Karyotype Stability in Diploid and Triploid Clonal Hybrid Fish (Cobitis, Cypriniformes, Teleostei.

    Directory of Open Access Journals (Sweden)

    Zuzana Majtánová

    Full Text Available Interspecific hybridization, polyploidization and transitions from sexuality to asexuality considerably affect organismal genomes. Especially the last mentioned process has been assumed to play a significant role in the initiation of chromosomal rearrangements, causing increased rates of karyotype evolution. We used cytogenetic analysis and molecular dating of cladogenetic events to compare the rate of changes of chromosome morphology and karyotype in asexually and sexually reproducing counterparts in European spined loach fish (Cobitis. We studied metaphases of three sexually reproducing species and their diploid and polyploid hybrid clones of different age of origin. The material includes artificial F1 hybrid strains, representatives of lineage originated in Holocene epoch, and also individuals of an oldest known age to date (roughly 0.37 MYA. Thereafter we applied GISH technique as a marker to differentiate parental chromosomal sets in hybrids. Although the sexual species accumulated remarkable chromosomal rearrangements after their speciation, we observed no differences in chromosome numbers and/or morphology among karyotypes of asexual hybrids. These hybrids possess chromosome sets originating from respective parental species with no cytogenetically detectable recombinations, suggesting their integrity even in a long term. The switch to asexual reproduction thus did not provoke any significant acceleration of the rate of chromosomal evolution in Cobitis. Asexual animals described in other case studies reproduce ameiotically, while Cobitis hybrids described here produce eggs likely through modified meiosis. Therefore, our findings indicate that the effect of asexuality on the rate of chromosomal change may be context-dependent rather than universal and related to particular type of asexual reproduction.

  4. Some conclusions of studies on irradiation of whole fish aboard fishing vessels

    International Nuclear Information System (INIS)

    Reinacher, E.; Ehlermann, D.A.E.

    1978-01-01

    Studies were conducted on irradiation of whole redfish and haddock (at 100 krad) and subsequent storage of the irradiated fish for up to approx. 30 days in ice. The fish were organoleptically evaluated at intervals during storage. The results show no significant difference in organoleptic quality between irradiated and non-irradiated samples during storage for [de

  5. 5-bp Classical Satellite DNA Loci from Chromosome-1 Instability in Cervical Neoplasia Detected by DNA Breakage Detection/Fluorescence in Situ Hybridization (DBD-FISH).

    Science.gov (United States)

    Cortés-Gutiérrez, Elva I; Ortíz-Hernández, Brenda L; Dávila-Rodríguez, Martha I; Cerda-Flores, Ricardo M; Fernández, José Luis; López-Fernández, Carmen; Gosálvez, Jaime

    2013-02-19

    We aimed to evaluate the association between the progressive stages of cervical neoplasia and DNA damage in 5-bp classical satellite DNA sequences from chromosome-1 in cervical epithelium and in peripheral blood lymphocytes using DNA breakage detection/fluorescence in situ hybridization (DBD-FISH). A hospital-based unmatched case-control study was conducted in 2011 with a sample of 30 women grouped according to disease stage and selected according to histological diagnosis; 10 with low-grade squamous intraepithelial lesions (LG-SIL), 10 with high-grade SIL (HG-SIL), and 10 with no cervical lesions, from the Unidad Medica de Alta Especialidad of The Mexican Social Security Institute, IMSS, Mexico. Specific chromosome damage levels in 5-bp classical satellite DNA sequences from chromosome-1 were evaluated in cervical epithelium and peripheral blood lymphocytes using the DBD-FISH technique. Whole-genome DNA hybridization was used as a reference for the level of damage. Results of Kruskal-Wallis test showed a significant increase according to neoplastic development in both tissues. The instability of 5-bp classical satellite DNA sequences from chromosome-1 was evidenced using chromosome-orientation FISH. In conclusion, we suggest that the progression to malignant transformation involves an increase in the instability of 5-bp classical satellite DNA sequences from chromosome-1.

  6. 5-bp Classical Satellite DNA Loci from Chromosome-1 Instability in Cervical Neoplasia Detected by DNA Breakage Detection/Fluorescence in Situ Hybridization (DBD-FISH

    Directory of Open Access Journals (Sweden)

    Jaime Gosálvez

    2013-02-01

    Full Text Available We aimed to evaluate the association between the progressive stages of cervical neoplasia and DNA damage in 5-bp classical satellite DNA sequences from chromosome-1 in cervical epithelium and in peripheral blood lymphocytes using DNA breakage detection/fluorescence in situ hybridization (DBD-FISH. A hospital-based unmatched case-control study was conducted in 2011 with a sample of 30 women grouped according to disease stage and selected according to histological diagnosis; 10 with low-grade squamous intraepithelial lesions (LG-SIL, 10 with high-grade SIL (HG-SIL, and 10 with no cervical lesions, from the Unidad Medica de Alta Especialidad of The Mexican Social Security Institute, IMSS, Mexico. Specific chromosome damage levels in 5-bp classical satellite DNA sequences from chromosome-1 were evaluated in cervical epithelium and peripheral blood lymphocytes using the DBD-FISH technique. Whole-genome DNA hybridization was used as a reference for the level of damage. Results of Kruskal-Wallis test showed a significant increase according to neoplastic development in both tissues. The instability of 5-bp classical satellite DNA sequences from chromosome-1 was evidenced using chromosome-orientation FISH. In conclusion, we suggest that the progression to malignant transformation involves an increase in the instability of 5-bp classical satellite DNA sequences from chromosome-1.

  7. Considerations in the use of fluorescence in situ hybridization (FISH) and confocal laser scanning microscopy to characterize rumen methanogens and define their spatial distributions.

    Science.gov (United States)

    Valle, Edith R; Henderson, Gemma; Janssen, Peter H; Cox, Faith; Alexander, Trevor W; McAllister, Tim A

    2015-06-01

    In this study, methanogen-specific coenzyme F420 autofluorescence and confocal laser scanning microscopy were used to identify rumen methanogens and define their spatial distribution in free-living, biofilm-, and protozoa-associated microenvironments. Fluorescence in situ hybridization (FISH) with temperature-controlled hybridization was used in an attempt to describe methanogen diversity. A heat pretreatment (65 °C, 1 h) was found to be a noninvasive method to increase probe access to methanogen RNA targets. Despite efforts to optimize FISH, 16S rRNA methanogen-specific probes, including Arch915, bound to some cells that lacked F420, possibly identifying uncharacterized Methanomassiliicoccales or reflecting nonspecific binding to other members of the rumen bacterial community. A probe targeting RNA from the methanogenesis-specific methyl coenzyme M reductase (mcr) gene was shown to detect cultured Methanosarcina cells with signal intensities comparable to those of 16S rRNA probes. However, the probe failed to hybridize with the majority of F420-emitting rumen methanogens, possibly because of differences in cell wall permeability among methanogen species. Methanogens were shown to integrate into microbial biofilms and to exist as ecto- and endosymbionts with rumen protozoa. Characterizing rumen methanogens and defining their spatial distribution may provide insight into mitigation strategies for ruminal methanogenesis.

  8. Performances Study of a Hybrid Rocket Engine

    Directory of Open Access Journals (Sweden)

    Adrian-Nicolae BUTURACHE

    2018-06-01

    Full Text Available This paper presents a study which analyses the functioning and performances optimization of a hybrid rocket engine based on gaseous oxygen and polybutadiene polymer (HTPB. Calculations were performed with NASA CEA software in order to obtain the parameters resulted following the combustion process. Using these parameters, the main parameters of the hybrid rocket engine were optimized. Using the calculus previously stated, an experimental rocket engine producing 100 N of thrust was pre-dimensioned, followed by an optimization of the rocket engine as a function of several parameters. Having the geometry and the main parameters of the hybrid rocket engine combustion process, numerical simulations were performed in the CFX – ANSYS commercial software, which allowed visualizing the flow field and the jet expansion. Finally, the analytical calculus was validated through numerical simulations.

  9. Genetic Relationships among Hylocereus and Selenicereus Vine Cacti (Cactaceae): Evidence from Hybridization and Cytological Studies

    Science.gov (United States)

    TEL-ZUR, NOEMI; ABBO, SHAHAL; BAR-ZVI, DUDY; MIZRAHI, YOSEF

    2004-01-01

    • Background and Aims Hylocereus and Selenicereus are native to tropical and sub-tropical America. Based on its taxonomic status and crossability relations it was postulated that H. megalanthus (syn. S. megalanthus) is an allotetraploid (2n = 4x = 44) derived from natural hybridization between two closely related diploid taxa. The present work aimed at elucidating the genetic relationships between species of the two genera. • Methods Crosses were performed and the putative hybrids were analysed by chromosome counts and morphological traits. The ploidy level of hybrids was confirmed by fluorescent in situ hybridization (FISH) of rDNA sites. Genomic in situ hybridization (GISH) was used in an attempt to identify the putative diploid genome donors of H. megalanthus and an artificial interploid hybrid. • Key Results Reciprocal crosses among four diploid Hylocereus species (H. costaricensis, H. monacanthus (syn. H. polyrhizus), H. undatus and Hylocereus sp.) yielded viable diploid hybrids, with regular chromosome pairing. Reciprocal crosses between these Hylocereus spp. and H. megalanthus yielded viable triploid, pentaploid, hexaploid and aneuploid hybrids. Morphological and phenological traits confirm the hybrid origin. In situ detection of rDNA sites was in accord with the ploidy status of the species and hybrid studied. GISH results indicated that overall sequence composition of H. megalanthus is similar to that of H. ocamponis and S. grandiflorus. High sequence similarity was also found between the parental genomes of H. monacanthus and H. megalanthus in one triploid hybrid. • Conclusions The ease of obtaining partially fertile F1 hybrids and the relative sequence similarity (in GISH study) suggest close genetic relationships among the taxa analysed. PMID:15329334

  10. Laboratory Studies on the Effects of Shear on Fish

    Energy Technology Data Exchange (ETDEWEB)

    Neitzel, Duane A.; Richmond, Marshall C.; Dauble, Dennis D.; Mueller, Robert P.; Moursund, Russell A.; Abernethy, Cary S.; Guensch, Greg R.

    2000-09-20

    The overall objective of our studies was to specify an index describing the hydraulic force that fish experience when subjected to a shear environment. Fluid shear is a phenomenon that is important to fish. However, elevated levels of shear may result in strain rates that injure or kill fish. At hydroelectric generating facilities, concerns have been expressed that strain rates associated with passage through turbines, spillways, and fish bypass systems may adversely affect migrating fish. Development of fish friendly hydroelectric turbines requires knowledge of the physical forces (injury mechanisms) that impact entrained fish and the fish's tolerance to these forces. It requires up-front, pre-design specifications for the environmental conditions that occur within the turbine system, in other words, determining or assuming that those conditions known to injure fish will provide the descriptions of conditions that engineers must consider in the design of a turbine system. These biological specifications must be carefully and thoroughly documented throughout the design of a fish friendly turbine. To address the development of biological specifications, we designed and built a test facility where juvenile fish could be subjected to a range of shear environments and quantified their biological response.

  11. A populational survey of 45S rDNA polymorphism in the Jefferson salamander Ambystoma jeffersonianum revealed by fluorescence in situ hybridization (FISH

    Directory of Open Access Journals (Sweden)

    Jinzhong FU

    2009-04-01

    Full Text Available The chromosomal localization of 45S ribosomal RNA genes in Ambystoma jeffersonianum was determined by fluorescence in situ hybridization with 18S rDNA fragment as a probe (FISH-rDNA. Our results revealed the presence of rDNA polymorphism among A.jeffersonianum populations in terms of number, location and FISH signal intensity on the chromosomes. Nine rDNA cytotypes were found in ten geographically isolated populations and most of them contained derivative rDNA sites. Our preliminary study provides strong indication of karyotypic diversification of A.jeffersonianum that is demonstrated by intraspecific variation of 45S rDNA cytotypes. rDNA cytotype polymorphism has been described in many other caudate amphibians. We predict that habitat isolation, low dispersal ability and decline of effective population size could facilitate the fixation and accumulation of variable rDNA cytotypes during their chromosome evolution.

  12. EGFR status in oral squamous cell carcinoma: comparing immunohistochemistry, FISH and CISH detection in a case series study.

    Science.gov (United States)

    Bernardes, Vanessa Fátima; Gleber-Netto, Frederico Omar; Sousa, Sílvia Ferreira de; Rocha, Rafael Malagoli; Aguiar, Maria Cássia Ferreira de

    2013-01-28

    To compare the immunohistochemistry (IHC) expression of epidermal growth factor receptor (EGFR) in oral squamous cell carcinomas (OSCC) with the gene amplification evaluated by fluorescence in situ hybridization (FISH) and chromogenic in situ hybridization (CISH) and their association with clinicopathological parameters. Additionally, we tested the sensibility and specificity of CISH in comparison with FISH. Case series study Oral surgery and pathology department in a school of dentistry. 52 patients with histopathological diagnosis of OSCC. Tumour tissue samples from 52 patients with OSCC were evaluated by IHC, FISH and CISH using tissue microarray technology. Clinicopathological data from all patients were collected. EGFR+ rates were 53.8% (28/52) by IHC, 5.8% (3/52) by CISH and 15.4% (8/52) by FISH. Amplification detected by CISH and FISH with IHC negative occurred in 3.8% (2/52), and one case (1.9%) showed amplification detected by CISH and FISH and protein overexpression concomitantly. There were 9.6% FISH+ cases with IHC and CISH negative rates and 6/8 (75%) FISH+ and also EGFR+ cases; however, an association between protein expression and gene amplification was not found for both techniques. IHC and FISH rates were not associated with clinicopathological features. CISH+ rates were associated with T3-T4 status. Compared with FISH assay, CISH reached a sensitivity of 37.5% and specificity of 100%. There is no association between EGFR expression and gene amplification in OSCC when the IHC is driven to external epitopes of the protein. Although CISH demonstrates specificity, technical problems may influence sensibility when compared with FISH.

  13. Analysis of the nitrifying bacterial community in BioCube sponge media using fluorescent in situ hybridization (FISH) and microelectrodes.

    Science.gov (United States)

    Chae, Kyu-Jung; Rameshwar, T; Jang, Am; Kim, Sung H; Kim, In S

    2008-09-01

    There is growing interest in the development of more cost-effective and retrofit technologies for the upgrade and expansion of existing wastewater treatment plants with extreme space constraints. A free-floating sponge media (BioCube) process, using a 24 L lab scale reactor, was operated to study the nitrification profiles and microbial community. The COD removal efficiencies were maintained, at an average of 95%, with the mixed liquor suspended solids (MLSS) inside the BioCube sponge media maintained at 12,688 mg/L. The nitrification removal efficiencies were between 92% and 100%, with an average value of 99%. From the results of microelectrode measurements, the ammonium ion concentration was found to rapidly decrease from the surface of the BioCube sponge media to a depth of 2mm due to chemical reactions carried out by ammonia oxidizing bacteria (AOB) species. Multi-fluorescence in situ hybridization (FISH) has been used to investigate the spatial distributions of various microbial activities within reactors. Microbial communities were targeted using different oligonucleotide probes specific to AOB and nitrite oxidizing bacteria (NOB). There were a large number of AOB populations, but these were not uniformly distributed in the biofilm compared to the NOB populations.

  14. Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish

    KAUST Repository

    Harrison, Hugo B.; Berumen, Michael L.; Saenz-Agudelo, Pablo; Salas, Eva; Williamson, David H.; Jones, Geoffrey P.

    2017-01-01

    interspecific hybrids from a collection of 2,991 coral trout sampled in inshore and mid-shelf reefs of the southern Great Barrier Reef. Hybrids were ubiquitous among reefs, fertile and spanned multiple generations suggesting both ecological and evolutionary

  15. The Hybridization of Ethnic Studies

    Science.gov (United States)

    Lum, Lydia

    2008-01-01

    This article discusses the growing interest of scholars studying the connections between Asian and Hispanic populations and cultures. Scholars examining transnational communities and relationships often fend off skepticism from peers in longer-established, clearly defined academic disciplines who wonder about the relevancy of their pursuits,…

  16. A Study of Fish Lice (Argulus Sp. Infection in Freshwater Food Fish

    Directory of Open Access Journals (Sweden)

    Aalberg K.

    2016-09-01

    Full Text Available Argulus sp., commonly referred to as fish lice, are crustacean ectoparasites of fishes. The hematophagous parasites attach to and feed off the integument of their hosts. Outbreaks of epizootics have been reported worldwide, causing mass mortalities and having serious economic implications for fish farms and culture efforts. Argulus fish lice may also serve as vectors of infectious diseases and as intermediate hosts of other parasites. Two native European species, A. foliaceus and A. coregoni, as well as the invasive Japanese fish louse A. japonicus, have previously been recorded in Slovakia. This study investigated samples collected at fish farms and culture sites of Common carp (Cyprinus carpio L., Pike-perch (Sander lucioperca L. and Brook trout (Salvelinus fontinalis M. in Eastern Slovakia, as well as samples collected from live fish imported to the Slovak Republic. A quantitative description of the of Argulus sp. was recorded from each locality. Samples from Common carp were identified as the invasive A. japonicus, and samples from Pike-perch and Brook trout were identified as A. foliaceus. Evidence of a mixed infection of Pike-perch with both A. foliaceus and A. japonicus was found in samples from Zemplínska Šírava, which was substantiated by electron microscopic examination. Morphometric characteristics were measured and averages and ranges produced for each species and sex.

  17. Metaphase FISH on a Chip: Miniaturized Microfluidic Device for Fluorescence in situ Hybridization

    DEFF Research Database (Denmark)

    Vedarethinam, Indumathi; Shah, Pranjul Jaykumar; Dimaki, Maria

    2010-01-01

    -FISH, the process continues to be a manual, labour intensive, expensive and time consuming technique, often taking over 3-5 days, even in dedicated labs. We have developed a novel microFISH device to perform metaphase FISH on a chip which overcomes many shortcomings of the current laboratory protocols. This work...... also introduces a novel splashing device for preparing metaphase spreads on a microscope glass slide, followed by a rapid adhesive tape-based bonding protocol leading to rapid fabrication of the microFISH device. The microFISH device allows for an optimized metaphase FISH protocol on a chip with over...... a 20-fold reduction in the reagent volume. This is the first demonstration of metaphase FISH on a microfluidic device and offers a possibility of automation and significant cost reduction of many routine diagnostic tests of genetic anomalies....

  18. Studies in mice fed a diet containing irradiated fish

    International Nuclear Information System (INIS)

    1979-01-01

    Three groups of mice were observed in utero and for eighty (80) weeks thereafter to study growth, food consumption, hematology, blood chemistry and survival with particular interest in carcinogenic potential. Group I received only Purina Mouse Chow, Group II received a diet composed of 45% non-irradiated fish and 55% Purina Mouse Chow, and Group III received a diet composed of 45% gamma irradiated fish and 55% Purina Mouse Chow. Differences observed in body weights between control and fish treated diets were due to the incorporation of fish into the diet and not the results of fish being treated with gamma irradiation. Differences observed in food consumption between control and fish treated diets were due to the incorporation of fish into the diet and not the result of fish being treated with gamma irradiation. No daily observations were made which could be attributed to the treatment of fish with gamma irradiation. No observations were made at any time interval for hematology which could be attributed to the treatment of fish with gamma irradiation. No observations were made at any time interval for clinical chemistry which could be attributed to the treatment of fish with gamma irradiation. Palpable mass data did not reveal any trends which could be related to the treatment of fish with gamma irradiation. Gross observations at necropsy were limited to spontaneously occurring lesions or artifacts of necropsy technique commonly associated with animals of this species and age. Organ weight data did not reveal any trends which could be related to the treatment of fish with gamma irradiation. Pathological findings were limited to spontaneously occurring lesions or artifacts of necropsy technique commonly associated with animals of this species and age. (orig.)

  19. A MULTIWAVELENGTH STUDY OF THREE HYBRID BLAZARS

    Energy Technology Data Exchange (ETDEWEB)

    Stanley, E. C.; Lister, M. L. [Department of Physics and Astronomy, Purdue University, 525 Northwestern Avenue, West Lafayette, IN 47907 (United States); Kharb, P. [Indian Institute of Astrophysics, II Block, Koramangala, Bangalore 560034 (India); Marshall, H. L. [Center for Space Research, Room NE80-6031, Massachusetts Institute of Technology, Cambridge, MA 02139 (United States); O’Dea, C.; Baum, S. [Department of Physics and Astronomy, University of Manitoba, Winnipeg, MB R3T 2N2 (Canada)

    2015-07-01

    We present multiwavelength imaging observations of PKS 1045−188, 8C 1849+670, and PKS 2216−038, three radio-loud active galactic nuclei from the MOJAVE-Chandra Sample that straddle the Fanaroff-Riley (FR) boundary between low- and high-power jets. These hybrid sources provide an excellent opportunity to study jet emission mechanisms and the influence of the external environment. We used archival VLA observations, and new Hubble and Chandra observations to identify and study the spectral properties of five knots in PKS 1045−188, two knots in 8C 1849+670, and three knots in PKS 2216−038. For the seven X-ray visible knots, we constructed and fit the broadband spectra using synchrotron and inverse Compton/cosmic microwave background (IC/CMB) emission models. In all cases, we found that the lack of detected optical emission ruled out the X-ray emission from the same electron population that produces radio emission. All three sources have high total extended radio power, similar to that of FR II sources. We find this is in good agreement with previously studied hybrid sources, where high-power hybrid sources emit X-rays via IC/CMB and the low-power hybrid sources emit X-rays via synchrotron emission. This supports the idea that it is total radio power rather than FR morphology that determines the X-ray emission mechanism. We found no significant asymmetries in the diffuse X-ray emission surrounding the host galaxies. Sources PKS 1045−188 and 8C 1849+670 show significant differences in their radio and X-ray termination points, which may result from the deceleration of highly relativistic bulk motion.

  20. TA3 - Dosimetry and instrumentation supply of the M-Fish technique to the Fish-3 painting technique for analysing translocations: A radiotherapy-treated patient study

    International Nuclear Information System (INIS)

    Pouzoulet, F.; Roch-Lefevre, S.; Giraudet, A.L.; Vaurijoux, A.; Voisin, P.A.; Buard, V.; Delbos, M.; Voisin, Ph.; Roy, L.; Bourhis, J.

    2006-01-01

    Purpose: Currently, the chromosome translocation study is the best method to estimate the dose of an old radiation exposure. Fluorescent In Situ Hybridization (F.I.S.H.) technique allows an easy detection of this kind of aberrations. However, as only a few number of chromosomes is usually painted, some bias could skew the result. To evaluate the advantage of using full genome staining (M-F.I.S.H. technique) compared with three chromosomes labelling (F.I.S.H.-3 painting), we compared translocation yields in radiotherapy treated patients. Methods: Chromosome aberration analyses were performed on peripheral blood lymphocyte cultures of two patients treated for a throat cancer by radiotherapy. Blood samples were obtained, before, along the treatment and six or four months later. For each sample, a dicentrics analysis was performed together with translocation analysis either with F.I.S.H.-3 painting or M-F.I.S.H.. Results: By confronting results from the F.I.S.H.-3 painting technique and the M-F.I.S.H. technique, significant differences were revealed. The translocations yield seemed to be stable with the F.I.S.H.-3 painting technique whereas it is not the case with the M-F.I.S.H. technique. This difference in results was explained by the bias induced by F.I.S.H.-3 Painting technique in the visualisation of complex aberrations. Furthermore, we found the presence of a clone bearing a translocation involving a painted chromosome. Conclusions: According to the potential bias of F.I.S.H.-3 painting on translocations study, the M-F.I.S.H. technique should provide more precise and reproducible results. Because of its more difficult implement, it seems hardly applicable to retrospective dosimetry instead of F.I.S.H.-3 painting technique. (authors)

  1. TA3 - Dosimetry and instrumentation supply of the M-Fish technique to the Fish-3 painting technique for analysing translocations: A radiotherapy-treated patient study

    Energy Technology Data Exchange (ETDEWEB)

    Pouzoulet, F.; Roch-Lefevre, S.; Giraudet, A.L.; Vaurijoux, A.; Voisin, P.A.; Buard, V.; Delbos, M.; Voisin, Ph.; Roy, L. [Institut de Radioprotection et de Surete Nucleaire, Lab. de Dosimetrie Biologique, 92 - Fontenay aux Roses (France); Bourhis, J. [Laboratoire UPRES EA 27-10, Radiosensibilite des Tumeurs et Tissus sains, PR1, 94 - Villejuif (France)

    2006-07-01

    Purpose: Currently, the chromosome translocation study is the best method to estimate the dose of an old radiation exposure. Fluorescent In Situ Hybridization (F.I.S.H.) technique allows an easy detection of this kind of aberrations. However, as only a few number of chromosomes is usually painted, some bias could skew the result. To evaluate the advantage of using full genome staining (M-F.I.S.H. technique) compared with three chromosomes labelling (F.I.S.H.-3 painting), we compared translocation yields in radiotherapy treated patients. Methods: Chromosome aberration analyses were performed on peripheral blood lymphocyte cultures of two patients treated for a throat cancer by radiotherapy. Blood samples were obtained, before, along the treatment and six or four months later. For each sample, a dicentrics analysis was performed together with translocation analysis either with F.I.S.H.-3 painting or M-F.I.S.H.. Results: By confronting results from the F.I.S.H.-3 painting technique and the M-F.I.S.H. technique, significant differences were revealed. The translocations yield seemed to be stable with the F.I.S.H.-3 painting technique whereas it is not the case with the M-F.I.S.H. technique. This difference in results was explained by the bias induced by F.I.S.H.-3 Painting technique in the visualisation of complex aberrations. Furthermore, we found the presence of a clone bearing a translocation involving a painted chromosome. Conclusions: According to the potential bias of F.I.S.H.-3 painting on translocations study, the M-F.I.S.H. technique should provide more precise and reproducible results. Because of its more difficult implement, it seems hardly applicable to retrospective dosimetry instead of F.I.S.H.-3 painting technique. (authors)

  2. Validation of microsatellite multiplexes for parentage analysis and species discrimination in two hybridizing species of coral reef fish (Plectropomus spp., Serranidae)

    KAUST Repository

    Harrison, H.B.

    2014-04-24

    Microsatellites are often considered ideal markers to investigate ecological processes in animal populations. They are regularly used as genetic barcodes to identify species, individuals, and infer familial relationships. However, such applications are highly sensitive the number and diversity of microsatellite markers, which are also prone to error. Here, we propose a novel framework to assess the suitability of microsatellite datasets for parentage analysis and species discrimination in two closely related species of coral reef fish, Plectropomus leopardus and P. maculatus (Serranidae). Coral trout are important fisheries species throughout the Indo-Pacific region and have been shown to hybridize in parts of the Great Barrier Reef, Australia. We first describe the development of 25 microsatellite loci and their integration to three multiplex PCRs that co-amplify in both species. Using simulations, we demonstrate that the complete suite of markers provides appropriate power to discriminate between species, detect hybrid individuals, and resolve parent-offspring relationships in natural populations, with over 99.6% accuracy in parent-offspring assignments. The markers were also tested on seven additional species within the Plectropomus genus with polymorphism in 28-96% of loci. The multiplex PCRs developed here provide a reliable and cost-effective strategy to investigate evolutionary and ecological dynamics and will be broadly applicable in studies of wild populations and aquaculture brood stocks for these closely related fish species. 2014 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

  3. Validation of microsatellite multiplexes for parentage analysis and species discrimination in two hybridizing species of coral reef fish (Plectropomus spp., Serranidae)

    KAUST Repository

    Harrison, H.B.; Feldheim, K.A.; Jones, G.P.; Ma, K.; Mansour, H.; Perumal, S.; Williamson, D.H.; Berumen, Michael L.

    2014-01-01

    Microsatellites are often considered ideal markers to investigate ecological processes in animal populations. They are regularly used as genetic barcodes to identify species, individuals, and infer familial relationships. However, such applications are highly sensitive the number and diversity of microsatellite markers, which are also prone to error. Here, we propose a novel framework to assess the suitability of microsatellite datasets for parentage analysis and species discrimination in two closely related species of coral reef fish, Plectropomus leopardus and P. maculatus (Serranidae). Coral trout are important fisheries species throughout the Indo-Pacific region and have been shown to hybridize in parts of the Great Barrier Reef, Australia. We first describe the development of 25 microsatellite loci and their integration to three multiplex PCRs that co-amplify in both species. Using simulations, we demonstrate that the complete suite of markers provides appropriate power to discriminate between species, detect hybrid individuals, and resolve parent-offspring relationships in natural populations, with over 99.6% accuracy in parent-offspring assignments. The markers were also tested on seven additional species within the Plectropomus genus with polymorphism in 28-96% of loci. The multiplex PCRs developed here provide a reliable and cost-effective strategy to investigate evolutionary and ecological dynamics and will be broadly applicable in studies of wild populations and aquaculture brood stocks for these closely related fish species. 2014 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

  4. Traditional method of fish treatment, microbial count and palatability studies on spoiled fish

    Directory of Open Access Journals (Sweden)

    Abd Aziz, N. A.

    2013-01-01

    Full Text Available Aims: To evaluate the microbial count and palatability acceptance of spoiled fish after treatment with traditionally used naturalsolution.Methodology and results: To compare microbial count of spoiled fish before and after treatment with natural solution practicedby local people in Malaysia, 10 g of spoiled fish was respectively rinsed with 100 mL of 0.1% of natural solution such as Averrhoabilimbi extract, rice rinsed water, rice vinegar, Citrus aurantifolia extract, salt, flour, and Tamarindus indica extract. Flesh of fishrinsed with rice vinegar was found to be able to reduce microbial count (CFU/mL = 0.37 X 107 more than 4.5 times whencompared to spoiled fish (CFU/mL=1.67x 107. Spoiled fish that was treated with rice vinegar was prepared into a cutlet and fried.The cutlet was subjected to palatability acceptance study by a group of residents in Palm Court Condominium, Brickfields, KualaLumpur. The palatability study from the Cronbach alpha shown that the taste have the reliability of 0.802, the aroma has thereliability of 0.888, colour with the reliability of 0.772, texture or mouth feel have reliability of 0.840 and physical structure of thecutlet is 0.829.Conclusion, significance and impact of study: Treatment of spoiled fish using rice vinegar as practice by local peopletraditionally shown a significant reduction in microbial count and the vinegar-treated fish could be developed into a product that issafe and acceptable by the consumer.

  5. Allele-specific expression at the androgen receptor alpha gene in a hybrid unisexual fish, the Amazon molly (Poecilia formosa.

    Directory of Open Access Journals (Sweden)

    Fangjun Zhu

    Full Text Available The all-female Amazon molly (Poecilia formosa is the result of a hybridization of the Atlantic molly (P. mexicana and the sailfin molly (P. latipinna approximately 120,000 years ago. As a gynogenetic species, P. formosa needs to copulate with heterospecific males including males from one of its bisexual ancestral species. However, the sperm only triggers embryogenesis of the diploid eggs. The genetic information of the sperm donor typically will not contribute to the next generation of P. formosa. Hence, P. formosa possesses generally one allele from each of its ancestral species at any genetic locus. This raises the question whether both ancestral alleles are equally expressed in P. formosa. Allele-specific expression (ASE has been previously assessed in various organisms, e.g., human and fish, and ASE was found to be important in the context of phenotypic variability and disease. In this study, we utilized Real-Time PCR techniques to estimate ASE of the androgen receptor alpha (arα gene in several distinct tissues of Amazon mollies. We found an allelic bias favoring the maternal ancestor (P. mexicana allele in ovarian tissue. This allelic bias was not observed in the gill or the brain tissue. Sequencing of the promoter regions of both alleles revealed an association between an Indel in a known CpG island and differential expression. Future studies may reveal whether our observed cis-regulatory divergence is caused by an ovary-specific trans-regulatory element, preferentially activating the allele of the maternal ancestor.

  6. Fluorescence In Situ Hybridization (FISH-Based Karyotyping Reveals Rapid Evolution of Centromeric and Subtelomeric Repeats in Common Bean (Phaseolus vulgaris and Relatives

    Directory of Open Access Journals (Sweden)

    Aiko Iwata-Otsubo

    2016-04-01

    Full Text Available Fluorescence in situ hybridization (FISH-based karyotyping is a powerful cytogenetics tool to study chromosome organization, behavior, and chromosome evolution. Here, we developed a FISH-based karyotyping system using a probe mixture comprised of centromeric and subtelomeric satellite repeats, 5S rDNA, and chromosome-specific BAC clones in common bean, which enables one to unambiguously distinguish all 11 chromosome pairs. Furthermore, we applied the karyotyping system to several wild relatives and landraces of common bean from two distinct gene pools, as well as other related Phaseolus species, to investigate repeat evolution in the genus Phaseolus. Comparison of karyotype maps within common bean indicates that chromosomal distribution of the centromeric and subtelomeric satellite repeats is stable, whereas the copy number of the repeats was variable, indicating rapid amplification/reduction of the repeats in specific genomic regions. In Phaseolus species that diverged approximately 2–4 million yr ago, copy numbers of centromeric repeats were largely reduced or diverged, and chromosomal distributions have changed, suggesting rapid evolution of centromeric repeats. We also detected variation in the distribution pattern of subtelomeric repeats in Phaseolus species. The FISH-based karyotyping system revealed that satellite repeats are actively and rapidly evolving, forming genomic features unique to individual common bean accessions and Phaseolus species.

  7. Epidemiological studies of nematodes in fishes

    International Nuclear Information System (INIS)

    Qamar, M.F.; Butt, K.; Qureshi, N.A.

    2014-01-01

    Three hundred fresh water fishes of six species were collected from six different fish farms of Lahore for the prevalence of nematodes. Out of 300 fishes examined, 12 were found to be infected with the helminthes, majority of them were isolated from the stomach and intestines. The following two species of nematodes were recorded; Capillaria spp. and Eustrongylides spp. The overall prevalence of intestinal nematodes was recorded as 4%(12/300). The prevalence of nematodes was recorded on monthly basis which ranged from 0-8%. The highest prevalence of nematodes was 8% (4/50) during March, while the lowest prevalence was noted in June 0%.Singharee (Sperata sawari) showed the maximum infestation of nematodes of 8% (4/50), whereas in Silver Carp (Hypopthaimichthys molitrix) minimum prevalence of nematode (0%) was noted. The prevalence of different nematode in a particular fish specie was also recorded, and it was stated that overall prevalence of capillaria spp. was 6% in Rahu (Labeo rohita) and Saul (Channa marullius). Similarly overall infestation of Eustrongylides sp. was recorded as 4% in Singharee (Sperata sawari) and Silver carp (Hypopthaimichthys molitrix). The nematode intensity might be linked with the genetic makeup, intestinal vigor, and other managemental and environmental factors. (author)

  8. Fish distribution studies near N Reactor, Summer 1983

    Energy Technology Data Exchange (ETDEWEB)

    Dauble, D.D.; Page, T.L.

    1984-06-01

    This report summarizes field studies that were initiated in July 1983 to provide estimates of the relative distribution of late-summer outmigrant juvenile salmonids and juvenile resident fish upstream of the N Reactor 009 Outfall. Chinook salmon are among the fish species most sensitive to thermal effects, and impacts to the juvenile outmigrant populations are of particular concern to state and federal regulatory and fisheries management agencies. Therefore, the distribution studies were conducted from late July through September, a period when high ambient river temperatures and low river flows make these salmonid populations most susceptible to thermal effects. In addition, data were not available on the spatial distribution of outmigrant juvenile chinook salmon in late summer. Information on the relative distribution of resident fish populations was also gathered. Previous studies of midstream distribution of juvenile resident fish were limited to a description of ichthyoplankton populations (Beak Consultants, Inc. 1980 Page et al. 1982), and no data were available on vertical or horizontal distribution of juvenile resident fish species near N Reactor. Relative densities and spatial distribution estimates of juvenile salmonid and resident fish species will be used in conjunction with laboratory thermal effects studies (Neitzel et al. 1984) and with plume characterization studies (Ecker et al. 1983) to assess potential impacts of thermal discharge on fish populations near N Reactor.

  9. Ecomorphology as a predictor of fish diet: a case study on the North Sea benthic fish community

    NARCIS (Netherlands)

    Diderich, W.P.

    2006-01-01

    A methodological approach based on fish ecomorphology was chosen to predict potential fish diet. This study tests a method used in earlier research on a marine ecosystem containing phylogenetically diverse organisms: the North Sea. Fish feeding morphology imposes constraints on feeding options. A

  10. Tubular and endothelial chimerism in renal allografts using fluorescence and chromogenic in situ hybridization (FISH, CISH) technology.

    Science.gov (United States)

    Varga, Zsuzsanna; Gaspert, Ariana; Behnke, Silvia; von Teichman, Adriana; Fritzsche, Florian; Fehr, Thomas

    2012-04-01

    The role of endothelial and tubular chimerism in renal allograft adaptation and rejection varies in different studies. We addressed the correlation between different clinico-pathological settings and sex-chromosomal endothelial and/or tubular chimerism in renal allografts. We examined the presence or absence of the X and Y chromosomes by fluorescence and chromogenic in situ hybridization (FISH, CISH) methodology on paraffin embedded kidney biopsies in 16 gender mismatched renal transplants (1 to 12 years post-transplantation). Twelve patients were male, four female. Four groups were selected: (i) Vascular calcineurin inhibitor toxicity without rejection; (ii) T-cell mediated vascular rejection; (iii) antibody mediated rejection; and (iv) C4d-positivity in AB0-incompatible transplants with or without rejection. Twelve non-transplant kidney biopsies (8 female, 4 male) were used as controls. Tubular chimerism was detected more frequently (69%) than endothelial chimerism (12%) in renal transplants. One of 12 control patients had tubular and endothelial chimeric cells (8%). The Y chromosome occurred in 8/12 male recipients (67%) in tubular epithelial cells and in 5/12 male recipients (42%) in endothelial cells. Double X chromosomes were detected in 3/4 female recipients in tubular epithelium. Tubular chimerism occurred more often with endothelial chimerism and capillaritis without correlation with other parameters, such as rejection. Combined Y chromosomal tubular and lymphatic endothelial chimerism correlated with T-cell mediated vascular rejection in two out of three patients (66%). Combined Y chromosomal tubular and peritubular capillary chimerism correlated with antibody mediated C4d+ rejection in one out of two patients (50%). Tubular and/or endothelial chimerism occur frequently in gender mismatched renal allografts and, when combined, this is associated with T-cell mediated rejection. © 2012 The Authors. Pathology International © 2012 Japanese Society of

  11. Advanced hybrid vehicle propulsion system study

    Science.gov (United States)

    Schwarz, R.

    1982-01-01

    Results are presented of a study of an advanced heat engine/electric automotive hybrid propulsion system. The system uses a rotary stratified charge engine and ac motor/controller in a parallel hybrid configuration. The three tasks of the study were (1) parametric studies involving five different vehicle types, (2) design trade-off studies to determine the influence of various vehicle and propulsion system paramaters on system performance fuel economy and cost, and (3) a conceptual design establishing feasibility at the selected approach. Energy consumption for the selected system was .034 1/km (61.3 mpg) for the heat engine and .221 kWh/km (.356 kWh/mi) for the electric power system over a modified J227 a schedule D driving cycle. Life cycle costs were 7.13 cents/km (11.5 cents/mi) at $2/gal gasoline and 7 cents/kWh electricity for 160,000 km (100,000 mi) life.

  12. Rapid molecular cytogenetic analysis of X-chromosomal microdeletions: Fluorescence in situ hybridization (FISH) for complex glycerol kinase deficiency

    Energy Technology Data Exchange (ETDEWEB)

    Worley, K.C.; Lindsay, E.A.; McCabe, E.R.B. [Baylor College of Medicine, Houston, TX (United States)] [and others

    1995-07-17

    Diagnosis of X-chromosomal microdeletions has relied upon the traditional methods of Southern blotting and DNA amplification, with carrier identification requiring time-consuming and unreliable dosage calculations. In this report, we describe rapid molecular cytogenetic identification of deleted DNA in affected males with the Xp21 contiguous gene syndrome (complex glycerol kinase deficiency, CGKD) and female carriers for this disorder. CGKD deletions involve the genes for glycerol kinase, Duchenne muscular dystrophy, and/or adrenal hypoplasia congenita. We report an improved method for diagnosis of deletions in individuals with CGKD and for identification of female carriers within their families using fluorescence in situ hybridization (FISH) with a cosmid marker (cosmid 35) within the glycerol kinase gene. When used in combination with an Xq control probe, affected males demonstrate a single signal from the control probe, while female carriers demonstrate a normal chromosome with two signals, as well as a deleted chromosome with a single signal from the control probe. FISH analysis for CGKD provides the advantages of speed and accuracy for evaluation of submicroscopic X-chromosome deletions, particularly in identification of female carriers. In addition to improving carrier evaluation, FISH will make prenatal diagnosis of CGKD more readily available. 17 refs., 2 figs.

  13. Determination of HER2 amplification in primary breast cancer using dual-colour chromogenic in situ hybridization is comparable to fluorescence in situ hybridization: a European multicentre study involving 168 specimens

    Science.gov (United States)

    García-Caballero, Tomás; Grabau, Dorthe; Green, Andrew R; Gregory, John; Schad, Arno; Kohlwes, Elke; Ellis, Ian O; Watts, Sarah; Mollerup, Jens

    2010-01-01

    García-Caballero T, Grabau D, Green A R, Gregory J, Schad A, Kohlwes E, Ellis I O, Watts S & Mollerup J (2010) Histopathology56, 472–480 Determination of HER2 amplification in primary breast cancer using dual-colour chromogenic in situ hybridization is comparable to fluorescence in situ hybridization: a European multicentre study involving 168 specimens Aims: Fluorescence in situ hybridization (FISH) can be used to reveal several genomic imbalances relevant to proper cancer diagnosis and to the correct treatment regime. However, FISH requires expensive and advanced fluorescence microscopes in addition to expertise in fluorescence microscopy. To determine whether a newly developed dual-colour chromogenic in situ hybridization (CISH) method is a suitable alternative to FISH, we analysed the human epidermal growth factor receptor 2 gene (HER2) amplification level of 168 breast cancer specimens using dual-colour CISH and FISH and compared the results. Methods and results: We found 100% agreement between HER2 status determined by FISH and dual-colour CISH. Furthermore, we observed that the time used to score slides was significantly reduced by 28% in dual-colour CISH compared with the FISH protocol. Concordance between HER2 protein status and dual-colour CISH or FISH was equally good with an overall agreement of 96.8%. Correlation between the HER2/centromere 17 gene ratios obtained with dual-colour CISH and FISH was highly significant with an overall correlation coefficient (ρ) of 0.96. Conclusions: We conclude that dual-colour CISH and bright field microscopy are excellent alternatives to FISH when analysing the HER2 status of primary breast cancer. PMID:20459554

  14. Cytogenetic effects in children and mothers exposed to air pollution assessed by the frequency of micronuclei and fluorescence in situ hybridization (FISH): a family pilot study in the Czech Republic

    DEFF Research Database (Denmark)

    Pedersen, Marie; Vinzents, Peter; Petersen, Joergen Holm

    2006-01-01

    A family pilot study was conducted in the Czech Republic to test the hypothesis that exposure to air pollution with particulate matter (PM) in children results in detectable effects indicated by a number of biomarkers of exposure and early effects. The frequency of micronuclei (MN) in peripheral...... with elevated carcinogenic polycyclic aromatic hydrocarbons (c-PAHs) concentration of the PM(2.5) measured in the ambient Teplice air, but other factors like genotoxic compounds from the diet or protective effect of micronutrients, which was not addressed in this pilot study, may also differ between the two...... exchanges (F(G)/100) were found in children or parents from the Teplice area in comparison with those from the Prachatice area. The family pilot study indicates that MN is a valuable and sensitive biomarker for early biological effect in children and adults living in two different areas characterised...

  15. QUANTITATIVE IMAGING AND STATISTICAL ANALYSIS OF FLUORESCENCE IN SITU HYBRIDIZATION (FISH) OF AUREOBASIDIUM PULLULANS. (R823845)

    Science.gov (United States)

    AbstractImage and multifactorial statistical analyses were used to evaluate the intensity of fluorescence signal from cells of three strains of A. pullulans and one strain of Rhodosporidium toruloides, as an outgroup, hybridized with either a universal o...

  16. Study on irradiaiton of freezing-dried Wuchang fish

    International Nuclear Information System (INIS)

    Chen Xueling; Cheng Wei; Xiong Guangquan; Ye Lixiu; Chen Yuxia; Guan Jian; He Jianjun

    2008-01-01

    The effects of irradiation on sterilization and storage time for the freezing-dried Wuchang fish were studied. The results show that the number of the coliform group in freezing-dried Wuchang fish irradiated at 1kGy can be acceptable according to the national industrial standard and the number of bacteria decrease from 3100cfu/g to <10cfu/g after irradiation. With the optimal irradiation dose 1kGy the shelf life of Wuchang fish can be extended over one year. (authors)

  17. Genetic population structure of turbot ( Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Nielsen, P.H.; Meldrup, Dorte

    2004-01-01

    Sea, suggesting high gene flow among populations in these areas. In contrast, there was a sharp cline in genetic differentiation going from the low saline Baltic Sea to the high saline North Sea. The data were explained best by two divergent populations connected by a hybrid zone; however......, a mechanical mixing model could not be ruled out. A significant part of the genetic variance could be ascribed to variation among years within locality. Nevertheless, the population structure was relatively stable over time, suggesting that the observed pattern of genetic differentiation is biologically...... significant. This study suggests that hybrid zones are a common phenomenon for marine fishes in the transition area between the North Sea and the Baltic Sea and highlights the importance of using interspecific comparisons for inferring population structure in high gene flow species such as most marine fishes....

  18. Fluctuation localization imaging-based fluorescence in situ hybridization (fliFISH) for accurate detection and counting of RNA copies in single cells

    Energy Technology Data Exchange (ETDEWEB)

    Cui, Yi; Hu, Dehong; Markillie, Lye Meng; Chrisler, William B.; Gaffrey, Matthew J.; Ansong, Charles; Sussel, Lori; Orr, Galya

    2017-10-04

    Quantitative gene expression analysis in intact single cells can be achieved using single molecule- based fluorescence in situ hybridization (smFISH). This approach relies on fluorescence intensity to distinguish between true signals, emitted from an RNA copy hybridized with multiple FISH sub-probes, and background noise. Thus, the precision in smFISH is often compromised by partial or nonspecific binding of sub-probes and tissue autofluorescence, limiting its accuracy. Here we provide an accurate approach for setting quantitative thresholds between true and false signals, which relies on blinking frequencies of photoswitchable dyes. This fluctuation localization imaging-based FISH (fliFISH) uses blinking frequency patterns, emitted from a transcript bound to multiple sub-probes, which are distinct from blinking patterns emitted from partial or nonspecifically bound sub-probes and autofluorescence. Using multicolor fliFISH, we identified radial gene expression patterns in mouse pancreatic islets for insulin, the transcription factor, NKX2-2, and their ratio (Nkx2-2/Ins2). These radial patterns, showing higher values in β cells at the islet core and lower values in peripheral cells, were lost in diabetic mouse islets. In summary, fliFISH provides an accurate, quantitative approach for detecting and counting true RNA copies and rejecting false signals by their distinct blinking frequency patterns, laying the foundation for reliable single-cell transcriptomics.

  19. Studying fish social behavior and cognition: implications for fish welfare and conservation

    Directory of Open Access Journals (Sweden)

    Rui F Oliveira

    2015-12-01

    Full Text Available Within vertebrates teleost fish are the most diverse and plastic taxa in terms of social behavior. With over 29,000 species described so far, one can find all different types of social organization, mating systems and parental care types. Moreover, it is relatively common to find variation of these characters within closely related species, which makes them suitable for comparative studies on the evolution of social behavior (e.g. variation in mating systems and parental care type in African cichlids. Fish are also champions of social plasticity, as can be illustrated by the flexible patterns of sexual expression, as in the case of protrandrous and protogynous sex-change, simultaneous hermaphroditism and intra-sexual variation in the form of discrete alternative male phenotypes. Complex cognitive abilities used in social interactions have also evolved in fish, such as individual recognition, transitive inference and social learning. Therefore, teleosts offer unique opportunities to study both the evolution and the function of social behavior and cognition. In this talk I will summarize the work that our lab has been doing to establish zebrafish as a model organism for the study of social behavior and cognition and I will illustrate how knowledge on this are can be applied to fish welfare and to conservation issues.

  20. MARKETING SYSTEM OF MARINE FISH IN BANGLADESH: AN EMPIRICAL STUDY

    OpenAIRE

    Islam, M. Serajul; Miah, Tofazzal Hossain; Haque, Md. Mojammel

    2000-01-01

    This paper was designed to investigate the present status of marine fish marketing aiming to determine marketing costs, margins and profits of marketing intermediaries both in domestic and export marketing. Primary data were collected by survey method wherein various market intermediaries were interviewed from selected districts for eliciting information at various stages of marine fish marketing. The study revealed that marketing margin as well as marketing profit both were relatively higher...

  1. Histopathological study on parasites in freshwater ornamental fishes in Iran

    OpenAIRE

    Nematollahi, A.; Jaberi, S.; Helan, J. Ashrafi; Sheikhzadeh, N.

    2014-01-01

    During March 2012 through February 2013, 100 freshwater ornamental fishes in 22 species from some aquarium fish shops were examined. Specimens were dissected and tissue samples consisted of liver, kidney, spleen, heart, intestine, ovary, brain and eye were fixed in 10 % buffered formalin and sections were provided and stained with hematoxylin and eosin, Periodic Acid-Schiff, Giemsa and acid-fast staining (Ziehl-Neelsen). At present study six species of protozoans consisting of Eimeria spp. Cr...

  2. Patterns of parasite distribution in the hybrids of non-congeneric cyprinid fish species: is asymmetry in parasite infection the result of limited coadaptation?

    Czech Academy of Sciences Publication Activity Database

    Krasnovyd, V.; Vetešník, Lukáš; Gettová, L.; Civáňová, K.; Šimková, A.

    2017-01-01

    Roč. 47, č. 8 (2017), s. 471-483 ISSN 0020-7519 R&D Projects: GA ČR GAP505/12/0375 Institutional support: RVO:68081766 Keywords : Interspecific hybrids * Cyprinid fish * Parasite communities * Host specificity * Maternal ancestry Subject RIV: EG - Zoology OBOR OECD: Parasitology Impact factor: 3.730, year: 2016

  3. Hybrid Warfare Studies and Russia’s Example in Crimea

    Directory of Open Access Journals (Sweden)

    Mehmet Seyfettin EROL

    2015-12-01

    Full Text Available Although Hybrid Warfare is an old concept, theoretical studies in the western countries mainly began in the post-Col War era, focusing on asymmetrical threats against conventional superiority of western countries such as USA or Israel. September 11th attacks and 2006 Israel-Lebanon war played important roles for the evolution of hybrid warfare theories. However, there has not any consensus among scholars on a exact or unique definition of hybrid warfare. Hybrid warfare became one of the main security issues for the West and especially for NATO after the Russia-Ukraine crisis. Russian military strategies, called “hybrid warfare” by the western countries, resulted in the successful annexation of Crimea and, caused a serious security problem for the West resulting important structural and functional changes for the military system of NATO. Russian activities, which have been based on surprise, ambiguity and deniability, presented a unique example for hybrid warfare studies.

  4. Hybrid striped bass feeds based on fish oil, beef tallow, and eicosapentaenoic acid/docosahexaenoic acid supplements: Insight regarding fish oil sparing and demand for -3 long-chain polyunsaturated fatty acids.

    Science.gov (United States)

    Bowzer, J; Jackson, C; Trushenski, J

    2016-03-01

    Previous research suggests that saturated (SFA) and monounsaturated fatty acid (MUFA) rich lipids, including beef tallow, can make utilization or diet-to-tissue transfer of long-chain polyunsaturated fatty acids (LC-PUFA) more efficient. We hypothesized that using beef tallow as an alternative to fish oil may effectively reduce the LC-PUFA demand of hybrid striped bass × and allow for greater fish oil sparing. Accordingly, we evaluated growth performance and tissue fatty acid profiles of juvenile fish (23.7 ± 0.3 g) fed diets containing menhaden fish oil (considered an ideal source of LC-PUFA for this taxon), beef tallow (BEEF ONLY), or beef tallow amended with purified sources of eicosapentaenoic acid (EPA) and/or docosahexaenoic acid (DHA) to achieve levels corresponding to 50 or 100% of those observed in the FISH ONLY feed. Diets were randomly assigned to quadruplicate tanks of fish ( = 4; 10 fish/tank), and fish were fed assigned diets to apparent satiation once daily for 10 wk. Survival (98-100%) was equivalent among treatments, but weight gain (117-180%), specific growth rate (1.1-1.5% BW/d), feed intake (1.4-1.8% BW/d), thermal growth coefficient (0.50-0.70), and feed conversion ratio (FCR; 1.1-1.4, DM basis) varied. Except for FCR, no differences were observed between the FISH ONLY and BEEF ONLY treatments, but performance was generally numerically superior among fish fed the diets containing beef tallow supplemented with DHA at the 100% or both EPA and DHA at the 50% or 100% level. Tissue fatty acid composition was significantly distorted in favor among fish fed the beef tallow-based feeds; however, profile distortion was most overt in peripheral tissues. Results suggest that beef tallow may be used as a primary lipid source in practical diets for hybrid striped bass, but performance may be improved by supplementation with LC-PUFA, particularly DHA. Furthermore, our results suggest that -3 LC-PUFA requirements reported for hybrid striped bass may not be

  5. Studying fish near ocean energy devices using underwater video

    Energy Technology Data Exchange (ETDEWEB)

    Matzner, Shari; Hull, Ryan E.; Harker-Klimes, Genevra EL; Cullinan, Valerie I.

    2017-09-18

    The effects of energy devices on fish populations are not well-understood, and studying the interactions of fish with tidal and instream turbines is challenging. To address this problem, we have evaluated algorithms to automatically detect fish in underwater video and propose a semi-automated method for ocean and river energy device ecological monitoring. The key contributions of this work are the demonstration of a background subtraction algorithm (ViBE) that detected 87% of human-identified fish events and is suitable for use in a real-time system to reduce data volume, and the demonstration of a statistical model to classify detections as fish or not fish that achieved a correct classification rate of 85% overall and 92% for detections larger than 5 pixels. Specific recommendations for underwater video acquisition to better facilitate automated processing are given. The recommendations will help energy developers put effective monitoring systems in place, and could lead to a standard approach that simplifies the monitoring effort and advances the scientific understanding of the ecological impacts of ocean and river energy devices.

  6. Cytogenetic analysis using fluorescence in situ hybridization (FISH) to evaluate occupational exposure to carcinogens

    Czech Academy of Sciences Publication Activity Database

    Šrám, Radim; Beskid, Olena; Binková, Blanka; Rössner, P.; Šmerhovský, Zdeněk

    2004-01-01

    Roč. 149, - (2004), s. 335-344 ISSN 0378-4274 R&D Projects: GA MŽP SI/340/2/00 Institutional research plan: CEZ:AV0Z5039906 Keywords : Chromosomal aberrations * Fluorescence in situ hybridization Subject RIV: DN - Health Impact of the Environment Quality Impact factor: 2.571, year: 2004

  7. Risk analysis of exotic fish species included in the Dutch Fisheries Act and their hybrids

    NARCIS (Netherlands)

    Schiphouwer, M.E.; Kessel, van N.; Matthews, J.; Leuven, R.S.E.W.; Koppel, S.; Kranenbarg, J.; Haenen, O.L.M.; Lenders, H.J.R.; Nagelkerke, L.A.J.; Velde, van der G.; Crombaghs, B.; Zollinger, R.

    2014-01-01

    In dit rapport worden de risico’s geanalyseerd van exotische vissoorten die zijn opgenomen in de Visserijwet en hun hybriden. De volgende soorten en één specifieke hybride zijn in de analyse meegenomen: beekridder (Salvelinus alpinus); roofblei (Leuciscus aspius); karper (Cyprinus carpio);

  8. Evaluation of gene amplification and protein expression of HER-2/neu in esophageal squamous cell carcinoma using Fluorescence in situ Hybridization (FISH) and immunohistochemistry

    International Nuclear Information System (INIS)

    Sato-Kuwabara, Yukie; Neves, José I; Fregnani, José HTG; Sallum, Rubens A; Soares, Fernando A

    2009-01-01

    Esophageal squamous cell carcinoma (ESCC) is the sixth most frequent neoplasia in Brazil. It is usually associated with a poor prognosis because it is often at an advanced stage when diagnosed and there is a high frequency of lymph node metastases. It is important to know what prognostic factors can facilitate diagnosis, optimize therapeutic decisions, and improve the survival of these patients. A member of the epidermal growth factor receptor (EGFR) family, c-erbB-2, has received much attention because of its therapeutic implications; however, few studies involving fluorescence in situ hybridization (FISH) analysis of HER-2/neu gene amplification and protein expression in ESCC have been conducted. The aim of this study was to verify the presence of HER-2/neu gene amplification using FISH, and to correlate the results with immunohistochemical expression and clinical-pathological findings. One hundred and ninety-nine ESCC cases were evaluated using the Tissue Microarray (TMA) technique. A polyclonal antibody against c-erbB-2 was used for immunohistochemistry. Analyses were based on the membrane staining pattern. The results were classified according to the Herceptest criteria (DAKO): negative (0/1+), potential positive (2+) and positive (3+). The FISH reactions were performed according to the FISH HER2 PharmDx (DAKO) protocol. In each case, 100 tumor nuclei were evaluated. Cases showing a gene/CEN17 fluorescence ratio ≥ 2 were considered positive for gene amplification. The c-erbB-2 expression was negative in 117/185 cases (63.2%) and positive in 68 (36.8%), of which 56 (30.3%) were 2+ and 12 (6.5%) were 3+. No significant associations were found among protein expression, clinicopathological data and overall survival. Among the 47 cases analyzed, 38 (80.9%) showed no gene amplification while 9 (19.1%) showed amplification, as demonstrated by FISH. Cases that were negative (0/1+) and potential positive (2+) for c-erbB-2 expression by immunohistochemistry showed no

  9. A Hybrid Method for Image Segmentation Based on Artificial Fish Swarm Algorithm and Fuzzy c-Means Clustering

    Directory of Open Access Journals (Sweden)

    Li Ma

    2015-01-01

    Full Text Available Image segmentation plays an important role in medical image processing. Fuzzy c-means (FCM clustering is one of the popular clustering algorithms for medical image segmentation. However, FCM has the problems of depending on initial clustering centers, falling into local optimal solution easily, and sensitivity to noise disturbance. To solve these problems, this paper proposes a hybrid artificial fish swarm algorithm (HAFSA. The proposed algorithm combines artificial fish swarm algorithm (AFSA with FCM whose advantages of global optimization searching and parallel computing ability of AFSA are utilized to find a superior result. Meanwhile, Metropolis criterion and noise reduction mechanism are introduced to AFSA for enhancing the convergence rate and antinoise ability. The artificial grid graph and Magnetic Resonance Imaging (MRI are used in the experiments, and the experimental results show that the proposed algorithm has stronger antinoise ability and higher precision. A number of evaluation indicators also demonstrate that the effect of HAFSA is more excellent than FCM and suppressed FCM (SFCM.

  10. A comparative genomic hybridization study in a 46,XX male.

    Science.gov (United States)

    Rigola, M Angels; Carrera, Marta; Ribas, Isabel; Egozcue, Josep; Miró, Rosa; Fuster, Carme

    2002-07-01

    To identify Y chromosome material in an azoospermic male with an XX karyotype. Case report. Faculty of medicine and Centro de Patologia Celular (CPC) medical center. A 33-year-old man with infertility. G-banding, fluorescence in situ hybridization (FISH), polymerase chain reaction (PCR), and comparative genomic hybridization (CGH). FISH for X and Y chromosomes, PCR for the SRYgene and amelogenin gene in the Xp (AMGX) and (AMGY), and losses or gains with CGH. FISH analysis using X and Y chromosome-specific probes showed an X chromosome containing Y chromosome sequences on the top of the short arm; this Y chromosome region was not visible by conventional cytogenetic analysis. PCR amplification of DNA showed the presence of the sex-determining region of the Y chromosome (SRY) and the amelogenin gene in the pseudoautosomal boundary of the X chromosome (AMGX). CGH confirmed the presence of the chromosome region Yp11.2-pter and detected the presence of the two otherwise normal X chromosomes. The two Xpter (XPAR1) pseudoautosomal regions present in this XX male suggest the need to reevaluate XX males using CGH and PCR to characterize the clinical variability in XX males due to genes other than those located on the Y chromosome.

  11. Feasibility Study and Optimization of An Hybrid System (Eolian ...

    African Journals Online (AJOL)

    Feasibility Study and Optimization of An Hybrid System (Eolian- Photovoltaic - Diesel) With Provision of Electric Energy Completely Independent. ... reducing emissions of greenhouse gas (CO2 rate = 16086 kg / year for a system using only the generator diesel and is 599 kg / year for the stand alone hybrid system studied).

  12. Potential for bias in using hybrids between common carp (Cyprinus carpio) and goldfish (Carassius auratus) in endocrine studies: a first report of hybrids in Lake Mead, Nevada, U.S.A

    Science.gov (United States)

    Goodbred, Steven L.; Patino, Reynaldo; Orsak, Erik; Sharma, Prakash; Ruessler, Shane

    2013-01-01

    During a 2008 study to assess endocrine and reproductive health of common carp (Cyprinus carpio) in Lake Mead, Nevada (U.S.A.) we identified two fish, one male and one female, as hybrids with goldfish (Carassius auratus) based on morphology, lateral line scale count, and lack of anterior barbels. Gross examination of the female hybrid ovaries indicated presence of vitellogenic ovarian follicles; whereas histological evaluation of the male hybrid testes showed lobule-like structures with open lumens but without germ cells, suggesting it was sterile. Because common carp/goldfish hybrids are more susceptible to gonadal tumors and may have different endocrine profiles than common carp, researchers using common carp as a model for endocrine/reproductive studies should be aware of the possible presence of hybrids.

  13. A hybrid genetic linkage map of two ecologically and morphologically divergent Midas cichlid fishes (Amphilophus spp.) obtained by massively parallel DNA sequencing (ddRADSeq).

    Science.gov (United States)

    Recknagel, Hans; Elmer, Kathryn R; Meyer, Axel

    2013-01-01

    Cichlid fishes are an excellent model system for studying speciation and the formation of adaptive radiations because of their tremendous species richness and astonishing phenotypic diversity. Most research has focused on African rift lake fishes, although Neotropical cichlid species display much variability as well. Almost one dozen species of the Midas cichlid species complex (Amphilophus spp.) have been described so far and have formed repeated adaptive radiations in several Nicaraguan crater lakes. Here we apply double-digest restriction-site associated DNA sequencing to obtain a high-density linkage map of an interspecific cross between the benthic Amphilophus astorquii and the limnetic Amphilophus zaliosus, which are sympatric species endemic to Crater Lake Apoyo, Nicaragua. A total of 755 RAD markers were genotyped in 343 F(2) hybrids. The map resolved 25 linkage groups and spans a total distance of 1427 cM with an average marker spacing distance of 1.95 cM, almost matching the total number of chromosomes (n = 24) in these species. Regions of segregation distortion were identified in five linkage groups. Based on the pedigree of parents to F(2) offspring, we calculated a genome-wide mutation rate of 6.6 × 10(-8) mutations per nucleotide per generation. This genetic map will facilitate the mapping of ecomorphologically relevant adaptive traits in the repeated phenotypes that evolved within the Midas cichlid lineage and, as the first linkage map of a Neotropical cichlid, facilitate comparative genomic analyses between African cichlids, Neotropical cichlids and other teleost fishes.

  14. Human chromosome-specific changes in a human-hamster hybrid cell line (AL) assessed by fluorescent in situ hybridization (fish)

    International Nuclear Information System (INIS)

    Geard, Charles R.; Jenkins, Gloria

    1995-01-01

    Purpose: To quantitatively assess all gamma-ray induced chromosomal changes confined to one human chromosome using fluorescence microscopy and in situ hybridization with a fluorescently labeled human chromosome specific nucleic acid probe. Methods and Materials: Synchronized human-hamster hybrid cells containing human chromosome 11 were obtained by a modified mitotic shake-off procedure. G1 phase cells (> 95%) were irradiated with 137 Cs gamma rays (0, 0.5, 1.0, 1.5, 2.0, 4.0, 6.0, 8.0, and 10.0 Gy) at a dose rate of 1.1 Gy/min and mitotic cells collected 16-20 h later; chromosomal spreads were prepared, denatured, and hybridized with a fluorescein-tagged nucleic acid probe against total human DNA. Chromosomes were examined by fluorescence microscopy and all categories of change involving the human chromosome 11 as target, recorded. Results: Overall, of the 3104 human-hamster hybrid cells examined, 82.1% were euploid, of which 88.6% contained one copy of human chromosome 11, 6.2% contained two copies, and 5.2% contained 0 copies. This is compatible with mitotic nondisjunction in a small fraction of cells. Of the remaining 17.9% of cells, 85.2% were tetraploid cells with two copies of human chromosome 11. For all aberrations involving human chromosome 11 there was a linear relationship between yield and absorbed dose of 0.1 aberrations per chromosome per Gy. The yield of dicentrics, translocations, and terminal deletions that involve one lesion on the human chromosome was linear, while the yield of interstitial deletions that arise from two interacting lesions on the human chromosome was curvilinear. The frequencies of dicentrics and translocations were about equal, while there was a high (40-60%) incidence of incomplete exchanges between human and hamster chromosomes. Conclusions: Fluorescent in situ hybridization (FISH) procedures allow for the efficient detection of a broad range of induced changes in target chromosomes. Symmetrical exchanges induced in G1

  15. The accumulation study of 90Sr in fish from a fishpond of northern Taiwan

    International Nuclear Information System (INIS)

    Lee, Pi-Fen; Wang, Jeng-Jong; Huang, Ju-Chuan

    2013-01-01

    Three kinds of fish from a natural fishpond in the north of Taiwan were collected and analyzed in this study. The three species were non-predatory Ctenopharyn odon idellus, predatory Aristichthys nobilis and predatory Mylopharyngodon piceus. The activity concentrations of 90 Sr in bone and edible flesh of fish, as well as in water and soil of fishpond were measured by using the radiochemical analysis. Additionally, the concentration of stable calcium in fish bone, [Ca] bone , and that of stable strontium in fish bone, [Sr] bone , were measured by ICP-AES. From the results, the concentration factors of 90 Sr, CF( 90 Sr), in fish bone was no statistic difference between non-predatory and predatory fish. Besides, the accumulation of 90 Sr in the non-predatory fish remarkably decreased with increasing the fish weight. As for the predatory fish, they both showed no statistically significant correlations between the 90 Sr activity concentration and the fish weight. Regarding the activity concentrations of 90 Sr in fish bone, all the fish were observed positively correlated with the measured [Sr] bone . - Highlights: • There was no difference in CF( 90 Sr) between non-predatory and predatory fish. • The 90 Sr in non-predatory fish bone decreased with increasing fish weight. • There was no correlation between 90 Sr in predatory fish bone and the fish weight. • The 90 Sr in fish bone increased with the increase of [Sr] bone

  16. New preparation of fish material for interlaboratory study on PFCs

    NARCIS (Netherlands)

    Korytar, P.; Lohman, M.; Kwadijk, C.J.A.F.; Barneveld, van E.

    2007-01-01

    The Institute for Environmental Studies, Vrije Universiteit (IVM) has requested Wageningen IMARES to prepare a new fish material for use in the interlaboratory performance study on analysis of perfluorinated compounds (PFCs) due to the low amount of contaminants in the previously prepared material.

  17. Preparation of fish material for interlaboratory study on PFCs

    NARCIS (Netherlands)

    Korytar, P.; Kwadijk, C.J.A.F.; Lohman, M.; Barneveld, van E.

    2007-01-01

    The Institute for Environmental Studies, Vrije Universiteit (IVM) has requested Wageningen IMARES for the preparation of fish material for use in interDlaboratory performance study on analysis of perfluorinated compounds (PFCs). It was requested that the material should be prepared from fillet of

  18. MICROBIOLOGICAL STUDY ON ICE FROM A FISH STALL

    Directory of Open Access Journals (Sweden)

    E. Tirloni

    2012-08-01

    Full Text Available The ice used for exposure of fish products could be a source of secondary contamination due to ice machine, due to not respected good manufacturing practices, particularly when ice is left on the fish stall and the next day the new layer is deposited over the old one. Aim of this study was the verification of the hygienic risk of this procedure through analyses of the liquid produced by the zones “thawed cephalopods” and “fresh whole fish”. Almost the microorganisms found were Gram negative (in particular Pseudomonadaceae.

  19. Association of Serpulina hyodysenteriae with the colonic mucosa in experimental swine dysentery studied by fluorescent in situ hybridization

    DEFF Research Database (Denmark)

    Jensen, Tim Kåre; Boye, Mette; Møller, Kristian

    1998-01-01

    The localization of Serpulina hyodysenteriae in experimental swine dysentery was studied by fluorescent in situ hybridization (FISH) using an oligonucleotide probe targeting the 23S rRNA of S. hyodysenteriae. Nine 8-week-old pigs were challenged. Seven of the pigs were intragastrically dosed with 1......x10(9) cfu S. hyodysenteriae for 3 consecutive days, whereas two pigs were infected by contact. Six non-challenged pigs served as negative controls. The challenged pigs developed clinical swine dysentery from 8 to 14 days postinfection with typical gross lesions. By FISH S. hyodysenteriae cells...

  20. Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies.

    Science.gov (United States)

    Sun, Ying; Huang, Yu; Li, Xiaofeng; Baldwin, Carole C; Zhou, Zhuocheng; Yan, Zhixiang; Crandall, Keith A; Zhang, Yong; Zhao, Xiaomeng; Wang, Min; Wong, Alex; Fang, Chao; Zhang, Xinhui; Huang, Hai; Lopez, Jose V; Kilfoyle, Kirk; Zhang, Yong; Ortí, Guillermo; Venkatesh, Byrappa; Shi, Qiong

    2016-01-01

    Ray-finned fishes (Actinopterygii) represent more than 50 % of extant vertebrates and are of great evolutionary, ecologic and economic significance, but they are relatively underrepresented in 'omics studies. Increased availability of transcriptome data for these species will allow researchers to better understand changes in gene expression, and to carry out functional analyses. An international project known as the "Transcriptomes of 1,000 Fishes" (Fish-T1K) project has been established to generate RNA-seq transcriptome sequences for 1,000 diverse species of ray-finned fishes. The first phase of this project has produced transcriptomes from more than 180 ray-finned fishes, representing 142 species and covering 51 orders and 109 families. Here we provide an overview of the goals of this project and the work done so far.

  1. Rapid identification of bacteria and candida using pna-fish from blood and peritoneal fluid cultures: a retrospective clinical study

    Directory of Open Access Journals (Sweden)

    Harris Dana M

    2013-01-01

    Full Text Available Abstract Background Peptide nucleic acid fluorescent in situ hybridization (PNA-FISH is a rapid and established method for identification of Candida sp., Gram positive, and Gram negative bacteria from positive blood cultures. This study reports clinical experience in the evaluation of 103 positive blood cultures and 17 positive peritoneal fluid cultures from 120 patients using PNA-FISH. Our study provides evidence as to potential pharmaceutical cost savings based on rapid pathogen identification, in addition to the novel application of PNA-FISH to peritoneal fluid specimens. Methods Identification accuracy and elapsed time to identification of Gram positives, Gram negatives, and Candida sp., isolated from blood and peritoneal fluid cultures were assessed using PNA-FISH (AdvanDx, as compared to standard culture methods. Patient charts were reviewed to extrapolate potential pharmaceutical cost savings due to adjustment of antimicrobial or antifungal therapy, based on identification by PNA-FISH. Results In blood cultures, time to identification by standard culture methods for bacteria and Candida sp., averaged 83.6 hours (95% CI 56.7 to 110.5. Identification by PNA-FISH averaged 11.2 hours (95% CI 4.8 to 17.6. Overall PNA-FISH identification accuracy was 98.8% (83/84, 95% CI 93.5% to 99.9% as compared to culture. In peritoneal fluid, identification of bacteria by culture averaged 87.4 hours (95% CI −92.4 to 267.1. Identification by PNA-FISH averaged 16.4 hours (95% CI −57.3 to 90.0. Overall PNA-FISH identification accuracy was 100% (13/13, 95% CI 75.3% to 100%. For Candida sp., pharmaceutical cost savings based on PNA-FISH identification could be $377.74/day. For coagulase-negative staphylococcus (CoNS, discontinuation of vancomycin could result in savings of $20.00/day. Conclusions In this retrospective study, excellent accuracy of PNA-FISH in blood and peritoneal fluids with reduced time to identification was observed, as compared to

  2. Local economic regeneration in the fishing industry: a case study ...

    African Journals Online (AJOL)

    Local economic regeneration in the fishing industry: a case study. HR Lloyd, GS Horn. Abstract. Africa Insight Vol.33(4) 2003: 33-39. Full Text: EMAIL FULL TEXT EMAIL FULL TEXT · DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT. Article Metrics. Metrics Loading ... Metrics powered by PLOS ALM

  3. The experimental study of seed dispersal by fish (ichthyochory)

    NARCIS (Netherlands)

    Pollux, B.J.A.

    2011-01-01

    1.The last few years have seen an increased interest in the experimental study of seed dispersal by fish (ichthyochory). This paper reviews such experiments, aiming to determine what functional aspects of ichthyochory have been investigated, what experimental designs have been used and what the

  4. Large-scale polymorphism near the ends of several human chromosomes analyzed by using fluorescence in situ hybridization (FISH)

    Energy Technology Data Exchange (ETDEWEB)

    Trask, B.J.; Friedman, C. [Univ. of Washington, Seattle, WA (United States); Giorgi, D. [CNRS, Montpelier (France)] [and others

    1994-09-01

    We have discovered a large DNA segment that is polymorphically present at the ends of several human chromosomes. The segment, f7501, was originally derived form a human chromosome 19-specific cosmid library. FISH was used to determine the cosmid`s chromosomal distribution on 44 unrelated humans and several closely related primates. The human subjects represent a diversity of reproductively isolated ethnic populations. FISH analysis revealed that sequences highly homologous to the cosmid`s insert are present on both homologs at 3q, 15q,. and 19p in almost all individuals (88, 85, and 87 of 88 homologs, respectively). Other chromosomes sites were labeled much more rarely in the sampled individuals. For example, 56 of the 88 analyzed chromosomes 11 were labeled (18+/+, 6-/-, and 20+/- individuals). In contrast, 2q was labeled on only 1/88 sampled chromosomes. The termini of 2q, 5q, 6p, 6q, 7p, 8p, 9p, 9q, 11p, 12q, 16p, 19q, and 20q and an interstitial site at 2q13-14 were labeled in at least one individual of the set. EcoR1-fragments derived from the cosmid showed the same hybridization pattern as the entire cosmid, indicating that at least 40 kbp is shared by these chromosome ends. Ethnic differences in the allele frequency of these polymorphic variants was observed. For example, signals were observed on 8/10 and 7/10 of the chromosomes 7p and 16q, respectively, derived form Biakan Pygmies, but these sites were infrequently labeled in non-Pygmy human populations (2/68, respectively). This region has undergone significant changes in chromosome location during human evolution. Strong signal was seen on chimpanzee and gorilla chromosome 3, which is homologous to human chromosome 4, a chromosome unlabeled in any of the humans we have analyzed.

  5. Nonlocal study of ultimate plasmon hybridization

    DEFF Research Database (Denmark)

    Raza, Søren; Wubs, Martijn; Bozhevolnyi, Sergey I.

    2015-01-01

    the transition from separated dimers via touching dimers to finally overlapping dimers. In particular, we focus on the touching case, showing a fundamental limit on the hybridization of the bonding plasmon modes due to nonlocality. Using transformation optics, we determine a simple analytical equation...

  6. Hybrid Enrichment Verification Array: Module Characterization Studies

    Energy Technology Data Exchange (ETDEWEB)

    Zalavadia, Mital A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Smith, Leon E. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); McDonald, Benjamin S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kulisek, Jonathan A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mace, Emily K. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Deshmukh, Nikhil S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2016-03-01

    The work presented in this report is focused on the characterization and refinement of the Hybrid Enrichment Verification Array (HEVA) approach, which combines the traditional 186-keV 235U signature with high-energy prompt gamma rays from neutron capture in the detector and surrounding collimator material, to determine the relative enrichment and 235U mass of the cylinder. The design of the HEVA modules (hardware and software) deployed in the current field trial builds on over seven years of study and evolution by PNNL, and consists of a ø3''×3'' NaI(Tl) scintillator coupled to an Osprey digital multi-channel analyzer tube base from Canberra. The core of the HEVA methodology, the high-energy prompt gamma-ray signature, serves as an indirect method for the measurement of total neutron emission from the cylinder. A method for measuring the intrinsic efficiency of this “non-traditional” neutron signature and the results from a benchmark experiment are presented. Also discussed are potential perturbing effects on the non-traditional signature, including short-lived activation of materials in the HEVA module. Modeling and empirical results are presented to demonstrate that such effects are expected to be negligible for the envisioned implementation scenario. In comparison to previous versions, the new design boosts the high-energy prompt gamma-ray signature, provides more flexible and effective collimation, and improves count-rate management via commercially available pulse-processing electronics with a special modification prompted by PNNL.

  7. A Study of Fish Lice (Argulus Sp.) Infection in Freshwater Food Fish

    OpenAIRE

    Aalberg K.; Koščová L.; Šmiga Ľ.; Košuth P.; Koščo J.; Oros M.; Barčák D.; Lazar P.

    2016-01-01

    Argulus sp., commonly referred to as fish lice, are crustacean ectoparasites of fishes. The hematophagous parasites attach to and feed off the integument of their hosts. Outbreaks of epizootics have been reported worldwide, causing mass mortalities and having serious economic implications for fish farms and culture efforts. Argulus fish lice may also serve as vectors of infectious diseases and as intermediate hosts of other parasites. Two native European species, A. foliaceus and A. coregoni,...

  8. Feasibility study on the introduction of hybrid buses; Hybrid bus donyu kanosei chosa

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-03-01

    The purpose of this research is to design pilot projects for introducing hybrid buses into the public transportation sector. This research also covers contents regarding hybrid buses with a trolley-collector motor and a diesel engine, to identify technical and economical problems and to analyze cost beneficiation using hybrid buses. The trolley parallel hybrid system has been employed for the feasibility study. This system has abundant operation results in Europe and the USA. Its battery is small or is not necessary, and the maintenance cost is also low. As a result of the feasibility study, reduction effects of CO2 emission were found out. When the CO2 generation at the power plant is not counted, the reduction effect was estimated to be 32% compared with the CO2 emission from diesel buses. When the CO2 generation at the power plant is considered, it was estimated to be 18%. The cost beneficiation was investigated for the cases of the transportations using trolley system surrounding a medium-scale terminal among large-scale housing development, tourist resort, and stations. The annual income is estimated to be larger than the annual payment in each case. It was found that the hybrid bus is economically established. 17 refs., 48 figs., 41 tabs.

  9. Asexual Reproduction Does Not Apparently Increase the Rate of Chromosomal Evolution: Karyotype Stability in Diploid and Triploid Clonal Hybrid Fish (Cobitis, Cypriniformes, Teleostei)

    Czech Academy of Sciences Publication Activity Database

    Majtánová, Zuzana; Choleva, Lukáš; Symonová, Radka; Ráb, Petr; Kotusz, J.; Pekárik, L.; Janko, Karel

    2016-01-01

    Roč. 11, č. 1 (2016), e0146872-e0146872 E-ISSN 1932-6203 R&D Projects: GA ČR GAP506/10/1155; GA ČR GPP506/12/P857; GA ČR GA13-12580S Institutional support: RVO:67985904 Keywords : in-situ hybridization * fresh water fish * unisexual salamanders Subject RIV: EG - Zoology Impact factor: 2.806, year: 2016

  10. FEASIBILITY STUDY AND OPTIMIZATION OF AN HYBRID SYSTEM ...

    African Journals Online (AJOL)

    30 juin 2010 ... preliminary or comparative studies, both during development (design) and normal ... year for a system using only the generator diesel and is 599 kg / year for the ... Keywords: Hybrid system- Wind- Photovoltaic-Diesel- storage ...

  11. Comparative studies of metals in fish organs, sediments and water from Nigerian fresh water fish ponds

    International Nuclear Information System (INIS)

    Ipinmoroti, K.O.; Oshodi, A.A.; Owolabi, R.A.

    1997-01-01

    Fish samples (Illisha africana) were collected from six man-made fish pond in Edo and Ondo states, Nigeria. Some organs of the fish sediment and water from the fish habitat were analysed for Cd, Pb, Hg, Ca, Fe, Zn, Cu and Cr, Physico-chemical properties of water samples from the ponds were also re-corded. The concentration of the metals varied in the sediment water as well as in different organs of the fish. However, chromium was absent in all the samples. The descending order of metal concentration in fish organs was: gills intestine, head and muscle. To avoid harmful accumulation of these metals in the human system, the gills and the intestine should preferably be discarded while processing fish for consumption. The head with a relatively high concentration of calcium might be useful in feed formulation. (author)

  12. Three sympatric karyomorphs in the fish Astyanax fasciatus (Teleostei, Characidae do not seem to hybridize in natural populations

    Directory of Open Access Journals (Sweden)

    Maressa Ferreira-Neto

    2012-01-01

    Full Text Available Ninety individuals of the characid fish Astyanax fasciatus (Cuvier, 1819 were collected at Água da Madalena stream (Botucatu, São Paulo, Brazil and analyzed for diploid chromosome number 2n and karyotype composition as well as for the chromosomal location of the 5S and 18S ribosomal DNA (rDNA. Whereas no chromosome differences were associated with sex, three different karyomorphs with diploid chromosome numbers 2n=46, 2n=48 and 2n=50 were found. No intermediate 2n numbers were discovered. The 2n=50 karyomorph showed some differences in 18S rDNA location compared to the two other karyomorphs. Finally, all specimens with the 2n=46 karyomorph showed the presence of a partly heterochromatic macro supernumerary chromosome, which was absent in all individuals with the two other karyomorphs. All these results suggest that indviduals of the three different karyomorphs are not likely to hybridize in the examined populations. Our findings strongly suggest the presence of three separate species (sensu biological species concept easily diagnosed on the basis of differences in the diploid chromosome numbers and other chromosomal markers.

  13. Reliability of chromogenic in situ hybridization for epidermal growth factor receptor gene copy number detection in non-small-cell lung carcinomas: a comparison with fluorescence in situ hybridization study.

    Science.gov (United States)

    Yoo, Seol Bong; Lee, Hyun Ju; Park, Jung Ok; Choe, Gheeyoung; Chung, Doo Hyun; Seo, Jeong-Wook; Chung, Jin-Haeng

    2010-03-01

    Fluorescence in situ hybridization (FISH) has been known to be the most representative and standardized test for assessing gene amplification. However, FISH requires a fluorescence microscope, the signals are labile and rapidly fade over time. Recently, chromogenic in situ hybridization (CISH) has emerged as a potential alternative to FISH. The aim of this study is to test the reliability of CISH technique for the detection of epidermal growth factor receptor (EGFR) gene amplification in non-small-cell lung carcinomas (NSCLC), to compare CISH results with FISH. A total of 277 formalin-fixed and paraffin embedded NSCLC tissue samples were retrieved from the surgical pathology archives at Seoul National University Bundang Hospital. CISH and FISH examinations were performed to test EGFR gene amplification status. There was high concordance in the assessment of EGFR gene copy number between CISH and FISH tests (Kappa coefficient=0.83). Excellent concordance was shown between two observers on the interpretation of the CISH results (Kappa coefficient=0.90). In conclusion, CISH result is highly reproducible, accurate and practical method to determine EGFR gene amplification in NSCLC. In addition, CISH allows a concurrent analysis of histological features of the tumors and gene copy numbers.

  14. Motivational study for an hybrid demonstrator

    International Nuclear Information System (INIS)

    Boidron, M.; Fiorini, G.L.; Thomas, J.B.

    2001-02-01

    This document recalls first the role of hybrid accelerator driven systems (ADS) in the domain of transmutation of long-lived fission products and minor actinides. It presents the specific contribution of these systems in the management of radioactive wastes and their technical feasibility and safety aspects. Then, follows a motivational analysis for the construction of a demonstration facility with its specifications and R and D needs: feasibility, schedule, links with other ADS-related programs, cost, international cooperation, recommendations. (J.S.)

  15. DNA barcoding and microsatellites help species delimitation and hybrid identification in endangered galaxiid fishes.

    Science.gov (United States)

    Vanhaecke, Delphine; Garcia de Leaniz, Carlos; Gajardo, Gonzalo; Young, Kyle; Sanzana, Jose; Orellana, Gabriel; Fowler, Daniel; Howes, Paul; Monzon-Arguello, Catalina; Consuegra, Sofia

    2012-01-01

    The conservation of data deficient species is often hampered by inaccurate species delimitation. The galaxiid fishes Aplochiton zebra and Aplochiton taeniatus are endemic to Patagonia (and for A. zebra the Falkland Islands), where they are threatened by invasive salmonids. Conservation of Aplochiton is complicated because species identification is hampered by the presence of resident as well as migratory ecotypes that may confound morphological discrimination. We used DNA barcoding (COI, cytochrome b) and a new developed set of microsatellite markers to investigate the relationships between A. zebra and A. taeniatus and to assess their distributions and relative abundances in Chilean Patagonia and the Falkland Islands. Results from both DNA markers were 100% congruent and revealed that phenotypic misidentification was widespread, size-dependent, and highly asymmetric. While all the genetically classified A. zebra were correctly identified as such, 74% of A. taeniatus were incorrectly identified as A. zebra, the former species being more widespread than previously thought. Our results reveal, for the first time, the presence in sympatry of both species, not only in Chilean Patagonia, but also in the Falkland Islands, where A. taeniatus had not been previously described. We also found evidence of asymmetric hybridisation between female A. taeniatus and male A. zebra in areas where invasive salmonids have become widespread. Given the potential consequences that species misidentification and hybridisation can have for the conservation of these endangered species, we advocate the use of molecular markers in order to reduce epistemic uncertainty.

  16. Distinguishing between incomplete lineage sorting and genomic introgressions: complete fixation of allospecific mitochondrial DNA in a sexually reproducing fish (Cobitis; Teleostei, despite clonal reproduction of hybrids.

    Directory of Open Access Journals (Sweden)

    Lukas Choleva

    Full Text Available Distinguishing between hybrid introgression and incomplete lineage sorting causing incongruence among gene trees in that they exhibit topological differences requires application of statistical approaches that are based on biologically relevant models. Such study is especially challenging in hybrid systems, where usual vectors mediating interspecific gene transfers--hybrids with Mendelian heredity--are absent or unknown. Here we study a complex of hybridizing species, which are known to produce clonal hybrids, to discover how one of the species, Cobitis tanaitica, has achieved a pattern of mito-nuclear mosaic genome over the whole geographic range. We appplied three distinct methods, including the method using solely the information on gene tree topologies, and found that the contrasting mito-nuclear signal might not have resulted from the retention of ancestral polymorphism. Instead, we found two signs of hybridization events related to C. tanaitica; one concerning nuclear gene flow and the other suggested mitochondrial capture. Interestingly, clonal inheritance (gynogenesis of contemporary hybrids prevents genomic introgressions and non-clonal hybrids are either absent or too rare to be detected among European Cobitis. Our analyses therefore suggest that introgressive hybridizations are rather old episodes, mediated by previously existing hybrids whose inheritance was not entirely clonal. Cobitis complex thus supports the view that the type of resulting hybrids depends on a level of genomic divergence between sexual species.

  17. Conceptual design study for a laser fusion hybrid

    International Nuclear Information System (INIS)

    Maniscalco, J.A.

    1976-09-01

    Lawrence Livermore Laboratory and Bechtel Corporation have been involved in a joint effort to conceptually design a laser fusion hybrid reactor. The design which has evolved is a depleted-uranium fueled fast-fission blanket which produces fissile plutonium and electricity. A major objective of the design study was to evaluate the feasibility of producing fissile fuel with laser fusion. This feasibility evaluation was carried out by analyzing the integrated engineering performance of the complete conceptual design and by identifying the required laser/pellet performance. The performance of the laser fusion hybrid has also been compared to a typical fast breeder reactor. The results show that the laser fusion hybrid produces enough fissile material to fuel more than six light water reactors (LWR's) of equivalent thermal power while operating in a regime which requires an order of magnitude less laser and pellet performance than pure laser fusion. In comparison to a fast breeder reactor the hybrid produces 10 times more fissile fuel. An economic analysis of the design shows that the cost of electricity in a combined hybrid-LWR scenario is insensitive to the capital cost of the hybrid, increasing by only 20 to 40 percent when the capital cost of the hybrid ranges from 2 to 3 times more than an LWR

  18. EPR study of sagitta otoliths of Sciaenidae fish

    International Nuclear Information System (INIS)

    Beneditto, Ana Paula Madeira di; Franco, Roberto Weider de Assis

    2011-01-01

    Full text. Otoliths are crystalline structures of calcium carbonate (CaCO 3 ) located in the inner ear of bone fish that are responsible for balance maintenance in the water column and sense of direction. The bio mineralization of these structures occurs during the fish development; when the otolith growth layers are formed. In this work, electron paramagnetic resonance (EPR) spectroscopy is applied to study the sagitta otoliths via manganese (Mn 2+ ) spectra, since in calcium carbonates the Mn 2+ ion is a natural substitutional impurity at Ca 2+ sites. The sagitta otoliths of the Sciaenidae fish Paralonchurus brasiliensis, commonly known as cabeca dura (47 samples), and Stellifer rastrifer, known as cangoa (22 samples), were obtained from specimens captured in coastal areas of Rio de Janeiro State, southeastern Brazil: Atafona (21 deg 37'S), Farol de Sao Tome (22 deg 05'S) and Rio das Ostras (22 deg 30'S). EPR spectra of sagitta otoliths were obtained in X-band (9GHz) at room temperature. The EPR spectra are typical of Mn 2+ in aragonite powder, associated to an occupation of Ca 2+ site with nine nearest neighbor oxygen atoms. It is well established in the literature that the otolith core is constituted by calcite, which is covered by aragonite during the fish growth. However, otoliths of younger fishes showed similar EPR spectra when compared to the older ones, indicating that aragonite is the main bio mineral structure in both maturity stages. In a previous work, these two Sciaenidae species presented significant differences in sagitta otoliths shape, which were related to environmental differences (e.g. water temperature, nutrients, depth) among the sampling sites (Atafona, Farol de Sao Tome and Rio das Ostras). Meanwhile, we do not observed differences in the EPR spectra, indicating that the aragonite crystallization process and the occupation of manganese are not related with the environment where these fish species are living. Then, we can infer that the

  19. EPR study of sagitta otoliths of Sciaenidae fish

    Energy Technology Data Exchange (ETDEWEB)

    Beneditto, Ana Paula Madeira di; Franco, Roberto Weider de Assis [Universidade Estadual do Norte Fluminense (UENF), RJ (Brazil)

    2011-07-01

    Full text. Otoliths are crystalline structures of calcium carbonate (CaCO{sub 3}) located in the inner ear of bone fish that are responsible for balance maintenance in the water column and sense of direction. The bio mineralization of these structures occurs during the fish development; when the otolith growth layers are formed. In this work, electron paramagnetic resonance (EPR) spectroscopy is applied to study the sagitta otoliths via manganese (Mn{sup 2+}) spectra, since in calcium carbonates the Mn{sup 2+} ion is a natural substitutional impurity at Ca{sup 2+} sites. The sagitta otoliths of the Sciaenidae fish Paralonchurus brasiliensis, commonly known as cabeca dura (47 samples), and Stellifer rastrifer, known as cangoa (22 samples), were obtained from specimens captured in coastal areas of Rio de Janeiro State, southeastern Brazil: Atafona (21 deg 37'S), Farol de Sao Tome (22 deg 05'S) and Rio das Ostras (22 deg 30'S). EPR spectra of sagitta otoliths were obtained in X-band (9GHz) at room temperature. The EPR spectra are typical of Mn{sup 2+} in aragonite powder, associated to an occupation of Ca{sup 2+} site with nine nearest neighbor oxygen atoms. It is well established in the literature that the otolith core is constituted by calcite, which is covered by aragonite during the fish growth. However, otoliths of younger fishes showed similar EPR spectra when compared to the older ones, indicating that aragonite is the main bio mineral structure in both maturity stages. In a previous work, these two Sciaenidae species presented significant differences in sagitta otoliths shape, which were related to environmental differences (e.g. water temperature, nutrients, depth) among the sampling sites (Atafona, Farol de Sao Tome and Rio das Ostras). Meanwhile, we do not observed differences in the EPR spectra, indicating that the aragonite crystallization process and the occupation of manganese are not related with the environment where these fish species

  20. Exploring the relationship between convenience and fish consumption: a cross-cultural study.

    Science.gov (United States)

    Olsen, Svein Ottar; Scholderer, Joachim; Brunsø, Karen; Verbeke, Wim

    2007-07-01

    The purpose of the present study is to explore cultural differences in the meaning of convenience and the relationships between convenience, attitudes and fish consumption in five European countries. The results suggest that the meaning of meal convenience is not culture specific, whilst the absolute levels of convenience orientation and the perceived inconvenience of fish differ between cultures. Convenience orientation was highest in Poland, followed by Spain, and was lowest in the Netherlands. The relationships between convenience orientation and attitudes towards fish, and convenience orientation and fish consumption, were insignificant in most countries. However, convenience orientation was positively related to the perceived inconvenience of fish. Perceived inconvenience of fish was negatively related to both attitudes towards fish and to fish consumption. Together, these results confirm some earlier findings that fish is generally perceived as a relatively inconvenient type of food. This study suggests that convenience orientation can be crucial to understanding food choice or behaviour only when critical mediating constructs are explored.

  1. Fusion-fission hybrid studies in the United States

    International Nuclear Information System (INIS)

    Moir, R.W.; Lee, J.D.; Berwald, D.H.; Cheng, E.T.; Delene, J.G.; Jassby, D.L.

    1986-01-01

    Systems and conceptual design studies have been carried out on the following three hybrid types: (1) The fission-suppressed hybrid, which maximizes fissile material produced (Pu or 233 U) per unit of total nuclear power by suppressing the fission process and multiplying neutrons by (n,2n) reactions in materials like beryllium. (2) The fast-fission hybrid, which maximizes fissile material produced per unit of fusion power by maximizing fission of 238 U (Pu is produced) in which twice the fissile atoms per unit of fusion power (but only a third per unit of nuclear power) are made. (3) The power hybrid, which amplifies power in the blanket for power production but does not produce fuel to sell. All three types must sell electrical power to be economical

  2. Study on Mechanical Properties of Hybrid Fiber Reinforced Concrete

    Science.gov (United States)

    He, Dongqing; Wu, Min; Jie, Pengyu

    2017-12-01

    Several common high elastic modulus fibers (steel fibers, basalt fibers, polyvinyl alcohol fibers) and low elastic modulus fibers (polypropylene fiber) are incorporated into the concrete, and its cube compressive strength, splitting tensile strength and flexural strength are studied. The test result and analysis demonstrate that single fiber and hybrid fiber will improve the integrity of the concrete at failure. The mechanical properties of hybrid steel fiber-polypropylene fiber reinforced concrete are excellent, and the cube compressive strength, splitting tensile strength and flexural strength respectively increase than plain concrete by 6.4%, 3.7%, 11.4%. Doped single basalt fiber or polypropylene fiber and basalt fibers hybrid has little effect on the mechanical properties of concrete. Polyvinyl alcohol fiber and polypropylene fiber hybrid exhibit ‘negative confounding effect’ on concrete, its splitting tensile and flexural strength respectively are reduced by 17.8% and 12.9% than the single-doped polyvinyl alcohol fiber concrete.

  3. Flow Structures and Efficiency of Swimming Fish school: Numerical Study

    Science.gov (United States)

    Yatagai, Yuzuru; Hattori, Yuji

    2013-11-01

    The flow structure and energy-saving mechanism in fish school is numerically investigated by using the volume penalization method. We calculate the various patterns of configuration of fishes and investigate the relation between spatial arrangement and the performance of fish. It is found that the down-stream fish gains a hydrodynamic advantage from the upstream wake shed by the upstream fish. The most efficient configuration is that the downstream fish is placed in the wake. It reduces the drag force of the downstream fish in comparison with that in solo swimming.

  4. Implementation and importance of fluorescence in situ hybridization (fish) in paraffin tissues for categorization of B-cell lymphoma unclassifiable, with features intermediate between Burkitt lymphoma and diffuse large B-cell lymphoma

    International Nuclear Information System (INIS)

    Carvajal Cuenca, Alejandra

    2011-01-01

    The diagnostic criteria have been defined based on the tools that the country has acquired and international guidelines for pure entities: the LB, LDCGB, and the new entity of B lymphoma unclassifiable with features intermediate LDCGB and LB. The fluorescence in situ hybridization for the translocation (8;14) has been implemented in paraffin tissues for proper categorization. A total of 21 cases have been studied: the characteristics of patients, morphology, immunohistochemistry and the presence or absence of the translocation (8;14). Twelve of the cases have been classified as B-cell lymphoma unclassifiable with features intermediate between LDCGB and LB. Furthermore, nine of the cases were classified in LB. Fluorescence in situ hybridization (FISH) has been negative in 5 of the 21 cases. The diagnosis of lymphoma with features bordering between the LB and the LDCGB has been imperative for the survival of the patient and the corresponding treatment [es

  5. Detection of denitrification genes by in situ rolling circle amplification - fluorescence in situ hybridization (in situ RCA-FISH) to link metabolic potential with identity inside bacterial cells

    DEFF Research Database (Denmark)

    Hoshino, Tatsuhiko; Schramm, Andreas

    2010-01-01

    target site. Finally, the RCA product inside the cells was detected by standard fluorescence in situ hybridization (FISH). The optimized protocol showed high specificity and signal-to-noise ratio but low detection frequency (up to 15% for single-copy genes and up to 43% for the multi-copy 16S rRNA gene...... as Candidatus Accumulibacter phosphatis by combining in situ RCA-FISH with 16S rRNA-targeted FISH. While not suitable for quantification because of its low detection frequency, in situ RCA-FISH will allow to link metabolic potential with 16S rRNA (gene)-based identification of single microbial cells.......). Nevertheless, multiple genes (nirS and nosZ; nirS and the 16S rRNA gene) could be detected simultaneously in P. stutzeri. Environmental application of in situ RCA-FISH was demonstrated on activated sludge by the differential detection of two types of nirS-defined denitrifiers; one of them was identified...

  6. The development of FISH tools for genetic, phylogenetic and breeding studies in tomato (Solanum lycopersicum)

    NARCIS (Netherlands)

    Szinay, D.

    2010-01-01

    In this thesis various fluorescence in situ hybridization (FISH) technologies are described to support genome projects, plant breeding and phylogenetic analysis on tomato (Solanum lycopersicum, 2n=24). Its genome is 980 Mb and only 30 % are single copy sequences, which are mostly found in the

  7. Fluorescence in situ hybridization and molecular studies in infertile men with dysplasia of the fibrous sheath.

    Science.gov (United States)

    Baccetti, Baccio; Collodel, Giulia; Gambera, Laura; Moretti, Elena; Serafini, Francesca; Piomboni, Paola

    2005-07-01

    To perform fluorescence in situ hybridization (FISH) and molecular analysis in patients with the genetic sperm defect "dysplasia of the fibrous sheath" (DFS). Retrospective study. Regional Referral Center for Male Infertility, Siena, Italy. Twelve infertile patients with DFS sperm defects. Family history, lymphocytic karyotype, physical and hormonal assays, semen analysis. The DFS sperm phenotype was defined by light, fluorescent, and electron microscopy. Sperm chromosomal constitution was examined by FISH. Gene deletions were tested by polymerase chain reaction. The genetic sperm defect DFS was determined by transmission and scanning electron microscopy. Immunofluorescence staining of A-kinase anchoring protein 4 (AKAP4) showed a moderate and diffuse signal, revealing a disorganized and incompletely assembled fibrous sheath. In 11 of 12 DFS patients, polymerase chain reaction for detecting the presence of partial sequence of AKAP4/AKAP3 binding regions gave positive results. Fluorescence in situ hybridization was performed in decondensed sperm nuclei with probes for chromosomes 18, X, and Y. The mean disomy frequency of chromosome 18 was in the normal range, whereas the mean disomy frequencies of sex chromosomes and diploidies were twice those of controls. These results should be considered when DFS sperm are used in assisted reproductive technology, owing to the high risk of transmission of chromosomal unbalance and of DFS sperm defects to male offspring.

  8. Conceptual design study for a laser fusion hybrid

    International Nuclear Information System (INIS)

    Maniscalco, J.A.

    1976-01-01

    Lawrence Livermore Laboratory and Bechtel Corporation have been involved in a joint effort to conceptually design a laser fusion hybrid reactor. The design which has evolved is a depleted-uranium fueled fast-fission blanket which produces fissile plutonium and electricity. A major objective of the design study was to evaluate the feasibility of producing fissile fuel with laser fusion. This feasibility evaluation was carried out by analyzing the integrated engineering performance of the complete conceptual design and by identifying the required laser/pellet performance. The performance of the laser fusion hybrid has also been compared to a typical fast breeder reactor. The results show that the laser fusion hybrid produces enough fissile material to fuel more than six light water reactors (LWRs) of equivalent thermal power while operating in a regime which requires an order of magnitude less laser and pellet performance than pure laser fusion. In comparison to a fast breeder reactor the hybrid produces 10 times more fissile fuel. An economic analysis of the design shows that the cost of electricity in a combined hybrid-LWR scenario increases by only 20 to 40 percent when the capital cost of the hybrid ranges from 2 to 3 times more than an LWR

  9. Determination of 24 personal care products in fish bile using hybrid solvent precipitation and dispersive solid phase extraction cleanup with ultrahigh performance liquid chromatography-tandem mass spectrometry and gas chromatography-mass spectrometry.

    Science.gov (United States)

    Yao, Li; Lv, Yin-Zhi; Zhang, Li-Juan; Liu, Wang-Rong; Zhao, Jian-Liang; Liu, You-Sheng; Zhang, Qian-Qian; Ying, Guang-Guo

    2018-05-25

    Personal care products (PCPs) are ubiquitous in aquatic environments owing to the continuous discharge of domestic wastewater from highly urbanized regions. These PCPs can be adsorbed by fish and thereafter usually enter the bile of the fish through biliary excretion. In this study, a sensitive method based on a combination of hybrid solvent precipitation and dispersive solid phase extraction (d-SPE) purification was developed to simultaneously extract and detect 24 PCPs, namely, 16 biocides, 4 synthetic musks, and 4 benzotriazoles, from fish bile. Hybrid precipitation on solid phase extraction (SPE) tubes was applied to remove phospholipids and proteins, and a d-SPE procedure was used for further purification. The extraction solvents for the hybrid precipitation/SPE tubes and d-SPE materials were optimized. The method performance for bile samples both with and without enzyme hydrolysis using β-glucuronidase/aryl-sulfatase were validated. The 24 PCPs in fish bile were spiked with standard concentrations of 10 ng/mL, 20 ng/mL, 100 ng/mL, and 200 ng/mL to evaluate recoveries, which ranged from 70 to 120% for 16, 16, 22, and 21 analytes with hydrolysis, respectively, and 70-120% for 14, 15, 23, and 23 analytes without hydrolysis, respectively. The quantification limits for target PCPs were in the range 0.26-7.38 ng/mL [excluding musk xylene (MX) and musk ketone (MK)] and 0.20-9.48 ng/mL (excluding MX and MK) for bile samples with and without enzyme hydrolysis, respectively. After enzyme hydrolysis, 12 PCPs were detected in bile from fish collected from the Yangtze River, with a maximum detected concentration of 460 ng/mL, for triclosan (TCS). The hydrolysis reaction indicated that high percentages of glucuronide and sulfate metabolites for some PCPs, i.e. four parabens and TCS, existed in the bile. Copyright © 2018 Elsevier B.V. All rights reserved.

  10. Study of flax hybrid preforms reinforced epoxy composites

    International Nuclear Information System (INIS)

    Muralidhar, B. A

    2013-01-01

    Highlights: • We examine the thermal, viscoelastic and mechanical behaviour of flax preform hybrid composites. • The thermal stability of the matrix decrease with increasing volume fraction of flax preforms. • The effect of number of preform layers and the lay-up architecture were studied.. • Morphological study on the fractured surface of the composite laminate is carried out. - Abstracts: This study investigates the thermal, mechanical and thermomechanical properties of flax hybrid preform reinforced epoxy composites. Flax plain weave fabric and 1 × 1 weft rib knitted structures were together used as reinforcements and the composites were produced using hand lay-up technique. Specimen preparation and testing were carried out as per ASTM standards. Thermogravimetric analysis (TGA) indicates a decrease in thermal stability of the matrix polymer with the incorporation of flax hybrid preform. The dynamic mechanical analysis revealed a shift in the T g with the addition of flax hybrid preforms. Mechanical data obtained showed that tensile strength and stiffness is a product of the fibre/matrix synergy, whereas the compressive strength and stiffness are contributed by the reinforcing matrix. Additionally, investigation show that laminate with knitted preform as skin layer exhibits superior mechanical properties. However, improved tensile properties at lower fibre volume fraction, reinforces the opinion that hybrid preform composites can offer significant benefits in terms of performance, weight and overall cost. The failure mechanism was analysed, by scanning electron microscope (SEM)

  11. RNA-FISH to Study Regulatory RNA at the Site of Transcription.

    Science.gov (United States)

    Soler, Marta; Boque-Sastre, Raquel; Guil, Sonia

    2017-01-01

    The increasing role of all types of regulatory RNAs in the orchestration of cellular programs has enhanced the development of a variety of techniques that allow its precise detection, quantification, and functional scrutiny. Recent advances in imaging and fluoresecent in situ hybridization (FISH) methods have enabled the utilization of user-friendly protocols that provide highly sensitive and accurate detection of ribonucleic acid molecules at both the single cell and subcellular levels. We herein describe the approach originally developed by Stellaris ® , in which the target RNA molecule is fluoresecently labeled with multiple tiled complementary probes each carrying a fluorophore, thus improving sensitivity and reducing the chance of false positives. We have applied this method to the detection of nascent RNAs that partake of special regulatory structures called R loops. Their growing role in active gene expression regulation (Aguilera and Garcia-Muse, Mol Cell 46:115-124, 2012; Ginno et al., Mol Cell 45:814-825, 2012; Sun et al., Science 340:619-621, 2013; Bhatia et al., Nature 511:362-365, 2014) imposes the use of a combination of in vivo and in vitro techniques for the detailed analysis of the transcripts involved. Therefore, their study is a good example to illustrate how RNA FISH, combined with transcriptional arrest and/or cell synchronization, permits localization and temporal characterization of potentially regulatory RNA sequences.

  12. PRELIMINARY STUDY OF FISH CULTURE IN ABANDONED SAND MINING POOL

    Directory of Open Access Journals (Sweden)

    Bambang Gunadi

    2006-12-01

    Full Text Available One of main problems in freshwater aquaculture development in Indonesia, especially in Java, is unavailability of developing zone. It is important to find an underutilized area that meets for industrial scale freshwater aquaculture, i.e. sufficient water supply, wide area, and located in one area or zone. The abandoned mining (sand, tin, etc. pools distributed along the country might be the potential area for freshwater aquaculture business. For example, there are at least 13 water pools with total surface area of 250 ha at 15 km side of Citarum River in Karawang District (West Java Province. This study was conducted to obtain preliminary data about the prospect and potency of fish culture (tilapia, clariid catfish, and ‘patin’ catfish in abandoned sand-mining pools in Karawang District. Mini floating net cages of 1 x 1 x 1.5 m3 size were used for culturing fish, i.e. patin catfish (Pangasianodon hypophthalmus, nile tilapia (Oreochromis niloticus, and clariid catfish (Clarias gariepinus, separately. Patin catfish were stocked at a size of 2 g with a density of 300 fish per cage, tilapia were stocked at a size of 6 g with a density of 400 fish per cage, while  the clariid catfish were stocked at a size of 1.4 g with a density of 980 fish per cage. A floating commercial feed (30%—32% protein, 3%—5% fat was used at a daily rate of 9% biomass weight at the beginning and reduced gradually to 3% at the final culture period. Observed data showed that patin catfish grew from the initial size of 2.08 g to the final size 299.59 g in 5 months, nile tilapia grew from individual initial size of 5.92 g to the final size of 247.12 g in 14 weeks, and clariid catfish grew from initial size of 1.39 g to the final size of 73.10 g in 8 weeks. These three species were technically prospective for aquaculture development in the abandoned sand-mining pools.

  13. St Lucie Rod and Reel Fish Health Study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data provide presence/absence of gross abnormalities on individual fish, identified to species, to allow calculation of the proportion of fish caught that had...

  14. Study of the cross-reactivity of fish allergens based on a questionnaire and blood testing

    OpenAIRE

    Kobayashi, Yukihiro; Huge, Jiletu; Imamura, Shintaro; Hamada-Sato, Naoko

    2016-01-01

    Background: Parvalbumin and collagen have been identified as cross-reactive allergens for fish allergies. Although doctors realize that various fish elicit allergies, the targets of food allergen labeling laws were only mackerels and salmons in Japan and mackerels in South Korea. This study aimed to reveal the causative species for fish allergy via questionnaires and blood tests. Methods: Questionnaire research was conducted in Japan via the internet concerning allergies for fish-allergic ...

  15. Consumer Acceptance of Eco-Labeled Fish: A Mexican Case Study

    OpenAIRE

    Pérez-Ramírez, Mónica; Almendarez-Hernández, Marco; Avilés-Polanco, Gerzaín; Beltrán-Morales, Luis

    2015-01-01

    Fish eco-labeling is a market-based incentive program for sustainable fisheries. This paper examines consumers’ acceptance of eco-labeled fish by using data from a pilot study conducted in a coastal area of northwestern Mexico. An ordered probit model was applied, using 364 observations. The results show that most respondents favor the idea of eco-labeled fish as a sustainable option and know that this is a costlier option. Income level, consumers’ occupation and frequency of fish consumption...

  16. speciation through asexuality in fish: postzygotic reproductive isolation may be completed in spite of fertility of hybrids

    Directory of Open Access Journals (Sweden)

    Karel Janko

    2015-12-01

    Altogether, it appears that initiation of hybrid asexuality and the completion of speciation process through formation of postRIMs are interconnected phenomena. Both processes are linked to the genetic divergence of hybridizing taxa: initially, hybridization between little diverged species leads to recombinant and fertile hybrids allowing intensive gene flow. As the hybridizing taxa continue to diverge, clonally reproducing hybrid females and sterile males become dominant and the gene flow ceases. The speciation may therefore be completed through asexuality of hybrids The work was supported by grant no. 13-12580S provided by the Czech Science Foundation (www.gacr.cz. Further support was provided by the Academy of Sciences of the Czech Republic (www.cas.cz by the grant no. RVO 67985904

  17. Report of the Study Group on the History of Fish and Fisheries (SGHIST)

    DEFF Research Database (Denmark)

    The Study Group on the History of Fish and Fisheries (SGHIST) brings together fish-eries scientists, historians and marine biologists working on multidecadal to centen-nial changes in the marine environment, and aims at improving the understanding of the long term dynamics of fish populations...

  18. Study of the cross-reactivity of fish allergens based on a questionnaire and blood testing.

    Science.gov (United States)

    Kobayashi, Yukihiro; Huge, Jiletu; Imamura, Shintaro; Hamada-Sato, Naoko

    2016-07-01

    Parvalbumin and collagen have been identified as cross-reactive allergens for fish allergies. Although doctors realize that various fish elicit allergies, the targets of food allergen labeling laws were only mackerels and salmons in Japan and mackerels in South Korea. This study aimed to reveal the causative species for fish allergy via questionnaires and blood tests. Questionnaire research was conducted in Japan via the internet concerning allergies for fish-allergic patients or their family members. Next, IgE reactivities and cross-reactivities of 26 fish species were analyzed using sera obtained from 16 Japanese patients who were allergic to fish parvalbumin or collagen by enzyme-linked immunosorbent assay (ELISA) and inhibition ELISA. Questionnaire research revealed that 88% patients cannot eat mackerel and salmon in addition to other fish. In addition, 85% respondents were not satisfied with the current food allergen labeling law. In ELISA analyses, we clarified that pooled serum obtained from patients with fish parvalbumin-specific allergies exhibited IgE reactivity to the extracts of most fish species, and pooled serum obtained from patients with fish collagen-specific allergies displayed IgE reactivity to the extracts of all types of fish. Inhibition ELISA experiments revealed cross-reactivities of parvalbumin or collagen to extracts from all fish tested. Most patients with fish allergies displayed allergic symptoms following the intake of various fish species. In addition, fish parvalbumin and collagen were causative factors of fish allergy and were highly cross-reactive fish panallergens. Therefore, current laws should be revised in Japan and South Korea. Copyright © 2016 Japanese Society of Allergology. Production and hosting by Elsevier B.V. All rights reserved.

  19. Study of an hybrid positron source using channeling for CLIC

    CERN Document Server

    Dadoun, O; Chehab, R; Poirier, F; Rinolfi, L; Strakhovenko, V; Variola, A; Vivoli, A

    2009-01-01

    The CLIC study considers the hybrid source using channeling as the baseline for positron production. The hybrid source uses a few GeV electron beam impinging on a crystal tungsten radiator. With the tungsten crystal oriented on its axis it results an intense, relatively low energy photon beam due mainly to channeling radiation. Those photons are then impinging on an amorphous tungsten target producing positrons by e+e− pair creation. In this note the optimization of the positron yield and the peak energy deposition density in the amorphous target are studied according to the distance between the crystal and the amorphous targets, the primary electron energy and the amorphous target thickness.

  20. Exploring the relationship between convenience and fish consumption: A cross-cultural study

    DEFF Research Database (Denmark)

    Olsen, Svein Ottar; Scholderer, Joachim; Brunsø, Karen

    2007-01-01

    The purpose of the present study is to explore cultural differences in the meaning of convenience and the relationships between convenience, attitudes and fish consumption in five European countries. The results suggest that the meaning of meal convenience is not culture specific, whilst...... the absolute levels of convenience orientation and the perceived inconvenience of fish differ between cultures. Convenience orientation was highest in Poland, followed by Spain, and was lowest in the Netherlands. The relationships between convenience orientation and attitudes towards fish, and convenience...... orientation and fish consumption, were insignificant in most countries. However, convenience orientation was positively related to the perceived inconvenience of fish. Perceived inconvenience of fish was negatively related to both attitudes towards fish and to fish consumption. Together, these results confirm...

  1. Methodological issues affecting the study of fish parasites. III. Effect of fish preservation method

    Czech Academy of Sciences Publication Activity Database

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2018-01-01

    Roč. 127, č. 3 (2018), s. 213-224 ISSN 0177-5103 R&D Projects: GA ČR(CZ) GBP505/12/G112 Institutional support: RVO:68081766 Keywords : flounder Paralichthys-olivaceus * Neoheterobothrium-hirame * community structure * infection levels * Baltic sea * Odontobutidae * ectoparasites * Perciformes * collection * ecology * Parasite community * Preservation methods * Perca fluviatilis * Rhodeus amarus * Methodology * Parasitological examination Subject RIV: GL - Fish ing OBOR OECD: Fish ery Impact factor: 1.549, year: 2016

  2. Laboratory studies on the effects of shear on fish: Final report

    Energy Technology Data Exchange (ETDEWEB)

    Neitzel, Duane A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Richmond, M. C. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Dauble, D. D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mueller, R. P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Moursund, R. A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Abernethy, C. S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Guensch, G. R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Cada, G. F. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2000-09-01

    The overall objective of these studies was to specify an index describing the hydraulic force that fish experience when subjected to a shear environment. Fluid shear is a phenomenon that is important to fish. However, elevated levels of shear may result in strain rates that injure or kill fish. At hydroelectric generating facilities, concerns have been expressed that strain rates associated with passage through turbines, spillways, and fish bypass systems may adversely affect migrating fish. Development of fish-friendly hydroelectric turbines requires knowledge of the physical forces (injury mechanisms) that impact entrained fish and the fish’s tolerance to these forces. It requires up-front, pre-design specifications for the environmental conditions that occur within the turbine system; in other words, determining or assuming conditions known to injure fish will assist engineers in the design of a fish-friendly turbine system. To address the development of biological specifications, this experiment designed and built a test facility where juvenile fish could be subjected to a range of shear environments and quantified their biological response. The test data reported here provide quantified strain rates and the relationship of these forces to direct and indirect biological effects on fish. The study concludes that juvenile salmonids and American shad should survive shear environments where strain rates do not exceed 500 cm/s/cm at a Dy of 1.8 cm. Additional studies are planned with a sensor fish to better link hydraulic conditions found within the laboratory and field environments.

  3. Role of chromogenic in situ hybridization (CISH) in the evaluation of HER2 status in breast carcinoma: comparison with immunohistochemistry and FISH.

    Science.gov (United States)

    Li-Ning-T, Elsa; Ronchetti, Ruben; Torres-Cabala, Carlos; Merino, Maria J

    2005-10-01

    We report our experience with Chromogenic in Situ Hybridization (CISH) for the evaluation of HER2 amplification on 55 cases of formalin-fixed, paraffin-embedded invasive breast carcinomas of different histology. All the results were corrected for chromosome 17 aneusomy and compared with immunohistochemistry (IHC); a subset of cases was compared to FISH. Thirty-one of 32 cases in which FISH and CISH were performed yielded the same results. CISH and IHC showed a good concordance in the 0/1+ and 3+ category, while a poor agreement with weakly protein overexpression was confirmed. Chromosome 17 analysis was necessary in cases with a low number of HER2 gene copies. CISH is a useful tool to evaluate breast cancer HER2 status that can be easily implemented in a laboratory of surgical pathology.

  4. Studies of wolf x coyote hybridization via artificial insemination

    Science.gov (United States)

    Mech, L. David; Asa, Cheryl S.; Callahan, Margaret; Christensen, Bruce W.; Smith, Fran; Young, Julie K.

    2017-01-01

    Following the production of western gray wolf (Canis lupus) x western coyote (Canis latrans) hybrids via artificial insemination (AI), the present article documents that the hybrids survived in captivity for at least 4 years and successfully bred with each other. It further reports that backcrossing one of the hybrids to a male gray wolf by AI also resulted in the birth of live pups that have survived for at least 10 months. All male hybrids (F1 and F2) produced sperm by about 10 months of age, and sperm quality of the F1 males fell within the fertile range for domestic dogs, but sperm motility and morphology, in particular, were low in F2 males at 10 months but improved in samples taken at 22 months of age. These studies are relevant to a long-standing controversy about the identity of the red wolf (Canis rufus), the existence of a proposed new species (Canis lycaon) of gray wolf, and to the role of hybridization in mammalian evolution.

  5. Identification and determination of the viability of Giardia lamblia cysts and Cryptosporidium parvum and Cryptosporidium hominis oocysts in human fecal and water supply samples by fluorescent in situ hybridization (FISH) and monoclonal antibodies.

    Science.gov (United States)

    Lemos, Vanessa; Graczyk, Thaddeus K; Alves, Margarida; Lobo, Maria Luísa; Sousa, Maria C; Antunes, Francisco; Matos, Olga

    2005-12-01

    In the present study, fluorescent in situ hybridization (FISH) and monoclonal antibodies (MAbs) were evaluated for species-specific detection and viability determination of Giardia lamblia, Cryptosporidium parvum, and Cryptosporidium hominis in human fecal and water supply samples. A total of 50 fecal human samples positive for G. lamblia cysts, 38 positive for C. parvum, and 23 positive for C. hominis were studied. Also, 18 water supply samples positive for Giardia spp. and Cryptosporidium spp. by the United States Environmental Protection Agency (USEPA) Method 1623 were studied by FISH and fluorescein isothiocyanate (FITC)-conjugated MAbs. Eighteen percent of the fecal samples parasitologically positive for G. lamblia presented viable and nonviable cysts, and 5% of those positive for Cryptosporidium spp. presented viable and nonviable oocysts. Of the 18 water supply samples analyzed, 6 (33%) presented Giardia spp. viable and nonviable cysts and 2 (11%) presented viable and nonviable Cryptosporidium spp. oocysts. G. lamblia identification was confirmed by polymerase chain reaction (PCR) and sequencing of the beta-giardin gene in the fecal and water samples found positive by FISH and FITC-conjugated MAbs. C. parvum and Cryptosporidium muris were identified, by PCR and sequencing of the small subunit of ribosomal RNA gene, in seven and one water samples, respectively. Our results confirm that this technique enables simultaneous visualization, species-specific identification, and viability determination of the organisms present in human fecal and water supply samples.

  6. Fluorescence in situ hybridization (FISH screening for the 22q11.2 deletion in patients with clinical features of velocardiofacial syndrome but without cardiac anomalies

    Directory of Open Access Journals (Sweden)

    Paula Sandrin-Garcia

    2007-01-01

    Full Text Available The velocardiofacial syndrome (VCFS, a condition associated with 22q11.2 deletions, is characterized by a typical facies, palatal anomalies, learning disabilities, behavioral disturbances and cardiac defects. We investigated the frequency of these chromosomal deletions in 16 individuals with VCFS features who presented no cardiac anomalies, one of the main characteristics of VCFS. Fluorescent in situ hybridization (FISH with the N25 (D22S75; 22q11.2 probe revealed deletions in ten individuals (62%. Therefore, even in the absence of cardiac anomalies testing for the 22q11.2 microdeletions in individuals showing other clinical features of this syndrome is recommended.

  7. Experimental studies of the air hybrid engine charging operation

    OpenAIRE

    Zhao, H; Ma, T; Lee, CY

    2014-01-01

    Over the last few years, theoretical and modelling studies have been carried out on the feasibility and potential of novel mild air hybrid engine concepts based on production components. These mild air hybrid concepts are able to convert vehicle brake energy into pneumatic energy in the form of compressed air stored in the air tank. The compressed air can then be used to crank-start the engine by either injecting and expanding in the cylinder or driving a production air starter. Thus, the reg...

  8. Fish allergy and fish allergens

    DEFF Research Database (Denmark)

    Kuehn, A; Hilger, Christiane; Ollert, Markus

    2016-01-01

    Fish is one of the main elicitors for food allergies. For a long time, the clinical picture of fish allergy was reduced to the following features. First, fish-allergic patients suffer from a high IgE cross-reactivity among fishes so that they have to avoid all species. Second, clinically relevant...... symptoms are linked to the presence of IgE-antibodies recognizing parvalbumin, the fish panallergen. This view was challenged by results from recent studies as follows. 1. Allergic reactions which are limited to single or several fish species (mono-or oligosensitisations) apply not only to single cases...... but patients with this phenotype constitute an important sub-group among fish-allergic individuals. 2. Newly identified fish allergens, enolases, aldolases, and fish gelatin, are of high relevance as the majority of the fish-allergic individuals seem to develop specific IgE against these proteins. The present...

  9. Fish Health Study Ashtabula River Natural Resource Damage Assessment

    Science.gov (United States)

    Blazer, V.S.; Iwanowicz, L.R.; Baumann, P.C.

    2006-01-01

    INTRODUCTION The Ashtabula River is located in northeast Ohio, flowing into Lake Erie at Ashtabula, Ohio. Tributaries include Fields Brook, Hubbard Run, Strong Brook, and Ashtabula Creek. The bottom sediments, bank soils and biota of Fields Brook have been severely contaminated by unregulated discharges of hazardous substances. Hazardous substances have migrated downstream from Fields Brook to the Ashtabula River and Harbor, contaminating bottom sediments, fish and wildlife. There are presently more than 1,000,000 cubic yards of contaminated sediment in the Ashtabula River and Harbor, much of which originated from Fields Brook. Contaminants include polychlorinated biphenyls (PCBs), chlorinated benzenes, chlorinated ethenes, hexachlorobutadiene, polyaromatic hydrocarbons (PAHs), other organic chemicals, heavy metals and low level radionuclides. A Preassessment Screen, using existing data, was completed for the Ashtabula River and Harbor on May 18, 2001. Among the findings was that the fish community at Ashtabula contained approximately 45 percent fewer species and 52 percent fewer individuals than the Ohio EPA designated reference area, Conneaut Creek. The Ashtabula River and Conneaut Creek are similar in many respects, with the exception of the presence of contamination at Ashtabula. The difference in the fish communities between the two sites is believed to be at least partially a result of the hazardous substance contamination at Ashtabula. In order to investigate this matter further, the Trustees elected to conduct a study of the status and health of the aquatic biological communities of the Ashtabula River and Conneaut Creek in 2002-2004. The following document contains brief method descriptions (more detail available in attached Appendix A) and a summary of the data used to evaluate the health status of brown bullheads (Ameiurus nebulosus) and largemouth bass (Micropterus salmoides) collected from the above sites.

  10. Studies on CO2-laser Hybrid-Welding of Copper

    DEFF Research Database (Denmark)

    Nielsen, Jakob Skov; Olsen, Flemming Ove; Bagger, Claus

    2005-01-01

    CO2-laser welding of copper is known to be difficult due to the high heat conductivity of the material and the high reflectivity of copper at the wavelength of the CO2-laser light. THis paper presents a study of laser welding of copper, applying laser hybrid welding. Welding was performed as a hy...

  11. Extensive polymorphism and chromosomal characteristics of ribosomal DNA in a loach fish, Cobitis vardarensis (Ostariophysi, Cobitidae) detected by different banding techniques and fluorescence in situ hybridization (FISH)

    Czech Academy of Sciences Publication Activity Database

    Rábová, Marie; Ráb, Petr; Ozouf-Costaz, C.

    2001-01-01

    Roč. 111, - (2001), s. 413-422 ISSN 0016-6707 R&D Projects: GA ČR GA206/00/0668; GA AV ČR IAA6045704; GA AV ČR KSK6005114 Keywords : chromosome banding * cytotaxonomy * fish Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 0.916, year: 2001

  12. Methodological issues affecting the study of fish parasites. I. Duration of live fish storage prior to dissection.

    Science.gov (United States)

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2016-05-03

    We tested the ability of parasite species to respond quickly to artificial conditions (e.g. by changing abundance or even decreasing to extinction) while host fish species were being held alive prior to dissection. Prussian carp Carassius gibelio were sampled by electrofishing from 2 ponds alongside the River Dyje (Czech Republic) during 'cold' and 'warm' seasons. All fish were transported to the laboratory in aerated pond water and kept in a 1 m3 outdoor basin with aged tap water for 6 d. Twenty fish were dissected on consecutive days (total 120 fish for each site). Our results indicated that there was little change in parasite loading over the first 3 d of holding, suggesting no impact on parasitological studies undertaken over this period. From the fourth day, however, overall parasite abundance increased due to rapid reproduction of some parasite species, especially gyrodactylids in the cold season and dactylogyrids in the warm season. Parasite diversity appeared less stable in the warm season, with significant differences being registered as early as the second day. In addition to holding period, environmental conditions during fish holding will also play an important role in parasite community shifts.

  13. HER2 Gene Amplification Testing by Fluorescent In Situ Hybridization (FISH): Comparison of the ASCO-College of American Pathologists Guidelines With FISH Scores Used for Enrollment in Breast Cancer International Research Group Clinical Trials.

    Science.gov (United States)

    Press, Michael F; Sauter, Guido; Buyse, Marc; Fourmanoir, Hélène; Quinaux, Emmanuel; Tsao-Wei, Denice D; Eiermann, Wolfgang; Robert, Nicholas; Pienkowski, Tadeusz; Crown, John; Martin, Miguel; Valero, Vicente; Mackey, John R; Bee, Valerie; Ma, Yanling; Villalobos, Ivonne; Campeau, Anaamika; Mirlacher, Martina; Lindsay, Mary-Ann; Slamon, Dennis J

    2016-10-10

    Purpose ASCO and the College of American Pathologists (ASCO-CAP) recently recommended further changes to the evaluation of human epidermal growth factor receptor 2 gene (HER2) amplification by fluorescent in situ hybridization (FISH). We retrospectively assessed the impact of these new guidelines by using annotated Breast Cancer International Research Group (BCIRG) -005, BCIRG-006, and BCIRG-007 clinical trials data for which we have detailed outcomes. Patients and Methods The HER2 FISH status of BCIRG-005/006/007 patients with breast cancers was re-evaluated according to current ASCO-CAP guidelines, which designates five different groups according to HER2 FISH ratio and average HER2 gene copy number per tumor cell: group 1 (in situ hybridization [ISH]-positive): HER2-to-chromosome 17 centromere ratio ≥ 2.0, average HER2 copies ≥ 4.0; group 2 (ISH-positive): ratio ≥ 2.0, copies < 4.0; group 3 (ISH-positive): ratio < 2.0, copies ≥ 6.0; group 4 (ISH-equivocal): ratio < 2.0, copies ≥ 4.0 and < 6.0; and group 5 (ISH-negative): ratio < 2.0, copies < 4.0. We assessed correlations with HER2 protein, clinical outcomes by disease-free survival (DFS) and overall survival (OS) and benefit from trastuzumab therapy (hazard ratio [HR]). Results Among 10,468 patients with breast cancers who were successfully screened for trial entry, 40.8% were in ASCO-CAP ISH group 1, 0.7% in group 2; 0.5% in group 3, 4.1% in group 4, and 53.9% in group 5. Distributions were similar in screened compared with accrued subpopulations. Among accrued patients, FISH group 1 breast cancers were strongly correlated with immunohistochemistry 3+ status (P < .0001), whereas groups 2, 3, 4, and 5 were not; however, groups 2, 4 and, 5 were strongly correlated with immunohistochemistry 0/1+ status (all P < .0001), whereas group 3 was not. Among patients accrued to BCIRG-005, group 4 was not associated with significantly worse DFS or OS compared with group 5. Among patients accrued to BCIRG-006, only

  14. Diversitas Dan Hilangnya Jenis-jenis Ikan Disungai Ciliwung Dan Sungai Cisadane [Study of Fish Diversity and the Lost of Fish Species of River Ciliwung and R. Cisadane

    OpenAIRE

    Hadiaty, Renny Kurnia

    2011-01-01

    The fish research in Indonesian waters has been begun since 16 century ago. Most of the research collected fish around Batavia.Many new species was described and the type specimens deposited at the museums in Europe or America.The study of fish diversity and the lost of fish species was conducted at River Ciliwung and R. Cisadane in 2009. The aim of this study is to describe the recent fish diversity in both river drainages, then make a comparison with the number of species recorded based on ...

  15. Fluorescence in situ hybridization on formalin-fixed and paraffin-embedded tissue

    DEFF Research Database (Denmark)

    Laub Petersen, Bodil; Zeuthen, Mette Christa; Pedersen, Sanni

    2004-01-01

    Fluorescence in situ hybridization (FISH) is widely used to study numerical and structural genetic abnormalities in both metaphase and interphase cells. The technique is based on the hybridization of labeled probes to complementary sequences in the DNA or RNA of the cells. Interphase FISH is most...... in time lapse between removal of tissue and fixation, duration of fixation, enzymatic pretreatment, hybridization conditions, and posthybridization washing conditions are important factors in the hybridization. In this study, we have listed the results of a systematic approach to improve FISH on isolated...

  16. CADMIUM, LEAD AND MERCURY CONTENTS IN FISHES – CASE STUDY

    Directory of Open Access Journals (Sweden)

    Radovan Stanovič

    2012-02-01

    Full Text Available Fish meat is a perfect foodstuff which is up to standard of rational nourishment. It is source of healthy and good digestible material rich on proteins, minerals and vitamins. Fish muscles especially back and lateral muscles are the most important parts of fish organism consumed for escellent chemical composition. Proteins in fish meat are rich on high aminoacids content. The content of fish fat is usually low with the high proportion of unsaturated fatty acids. Also minerals and B, A and D vitamins are very important components of this foodstuff. According to rational nourishment the fish meat should be consumed minimal 2 times weekly. Our research was focused on analysis of bottomn sediments in water reservoir Kolinany from the aspect of Cd, Hg and Pb contents, the determination of observed heavy metal contents in different parts of carp body and the evaluation of hygienic status and suitability of fish meat for the human consumption. Our results have confirmed the hygienic wholesomeness of bottom sediments in water reservoir Kolinany. The Cd, Pb and Hg contents in sediments represent no risk of their input into the fish organisms. The Cd content in fish meat was lower than maximal available amount given by legislative norms, but in selected parts of fish organism such as skin, gills and fins the Cd hygienic limit is 2.9 – 6.6 times exceeded. The Pb content in fish meat was under the hygienic limit, however in skin, gills and fins the content of this heavy metal was 1.31- 2.64 higher than maximal legislative given value. Fish skin, gills and fins belong to the non cosumed parts of fish body by people. The Hg content in fish meat was also lower than hygienc limit. The highest Hg content was observed in fish muscles (0.0544 mg.kg-1 and the lowest one in fish gonads (0.0058 mg.kg-1. The results of Cd, Pb and Hg content determination in carp body confirmed that fish muscles belong to suitable foodstuffs for the human consumption.

  17. Productivity and recovery of forage fish under climate change and fishing: North Sea sandeel as a case study

    DEFF Research Database (Denmark)

    Lindegren, Martin; van Deurs, Mikael; MacKenzie, Brian

    2018-01-01

    -east Atlantic, acting as a key prey for predatory fish and sea birds, as well as supporting a large commercial fishery. In this case study, we investigate the underlying factors affecting recruitment and how these in turn affect productivity of the North Sea sandeel using long-term data and modelling. Our...... results demonstrate how sandeel productivity in the central North Sea (Dogger Bank) depends on a combination of external and internal regulatory factors, including fishing and climate effects, as well as density dependence and food availability of the preferred zooplankton prey (Calanus finmarchicus...... and Temora longicornis). Furthermore, our model scenarios suggest that while fishing largely contributed to the abrupt stock decline during the late 1990s and the following period of low biomass, a complete recovery of the stock to the highly productive levels of the early 1980s would only be possible...

  18. Fish consumption and the risk of colorectal cancer: the Ohsaki Cohort Study

    OpenAIRE

    Sugawara, Y; Kuriyama, S; Kakizaki, M; Nagai, M; Ohmori-Matsuda, K; Sone, T; Hozawa, A; Nishino, Y; Tsuji, I

    2009-01-01

    Background: Evidence from laboratory and animal studies suggests that high fish consumption may reduce the risk of colorectal cancer, but the results of studies in humans have been inconsistent. The objective of this study was to prospectively examine the association between fish consumption and the risk of colorectal cancer incidence in Japan, where fish is widely consumed. Methods: We analysed data from 39?498 men and women registered in the Ohsaki National Health Insurance Cohort Study who...

  19. Process in Developing Zebra fish Laboratory at Malaysian Nuclear Agency for Toxicology Studies

    International Nuclear Information System (INIS)

    Fazliana Mohd Saaya; Mohd Noor Hidayat Adenan; Anee Suryani Sued

    2015-01-01

    Toxicology is a branch of the very important especially in determining the safety and effectiveness of herbal products to avoid any side effects to the user. Currently, toxicity tests conducted in the laboratory is testing the toxicity of shrimp, tests on cell cultures and experimental animal tests on the rats. One of the most recent exam easier and can reduce the use of experimental rats was testing on zebra fish fish. Fish zebra fish Danio rerio, suitable for the study of toxicity, teratogenicity, genetic, oncology and neurobiology. Zebra fish system of aquarium fish zebra fish system has been in Nuclear Malaysia since 2013 but has not yet fully operational due to several factors and is in the process of moving into a new laboratory which systematically and in accordance with the enabling environment for care. The development of a new fully equipped laboratory is expected to benefit all for use in research. (author)

  20. Fish Health Studies Associated with the Kingston Fly Ash Spill, Spring 2009 - Fall 2010

    Energy Technology Data Exchange (ETDEWEB)

    Adams, Marshall [ORNL; Fortner, Allison M [ORNL

    2012-05-01

    On December 22, 2008, over 4 million cubic meters of fly ash slurry was released into the Emory River when a dike surrounding a solid waste containment area at the Tennessee Valley Authority's (TVA) Kingston Fossil Plant ruptured. One component of TVA's response to the spill is a biological monitoring program to assess short- and long-term ecological responses to the ash and associated chemicals, including studies on fish health and contaminant bioaccumulation. These studies were initiated in early Spring 2009 for the purposes of: (1) documenting the levels of fly ash-associated metals in various tissues of representative sentinel fish species in the area of the fly ash spill, (2) determining if exposure to fly ash-associated metals causes short, intermediate, or long-term health effects on these sentinel fish species, (3) assessing if there are causal relationships between exposure to metals and health effects on fish, (4) evaluating, along with information from other ecological and physicochemical studies, the nature and route of contaminant transfer though food chains into higher level consumers, (5) providing important information for the Ecological Risk Assessment (ERA) for the Kingston fly ash project, and (6) serving as an important technology information transfer or model study focused on how to best evaluate the environmental effects of fly ash (and related environmental stressors), not only at the Kingston site, but also at sites on other aquatic systems where coal-fired generating stations are located. This report presents the results of the first two years of the fish health study. To date, fish health and bioaccumulation studies have been conducted from Spring 2009 though Fall 2011 and includes 6 seasonal studies: Spring 2009, Fall 2009, Spring 2010, Fall 2010, Spring 2011, and Fall 2011. Both the Spring and Fall studies have focused on 3-4 sentinel fish species that represent different feeding habits, behaviors, and home ranges. In addition

  1. Bibliographic study of radiostrontium uptake capacity and processes in fish

    International Nuclear Information System (INIS)

    Pally, Monique; Foulquier, Luc

    1979-09-01

    This report is a synthesis of published work on the contamination of fish by radiostrontium, covering 143 publications and reports. The authors highlight the most important findings, since past activity levels in fish allow the effects of future discharges to be estimated. Both marine and freshwater environments are analyzed. The radiostrontium activity is evaluated in fish from zones both directly and not directly affected by liquid effluent discharges. Quantitative data is cited for the concentration factors and biological half lives determined from field measurements and laboratory experiments. Physiological phenomena discussed include contamination kinetics, radiostrontium distribution in fish organisms and the extent of transfer through food chains. The effects of biological factors (age, weight, species) and environmental factors (temperature, salinity, influence of stable elements) are examined. The radiostrontium uptake potential is higher in fresh water fish than in marine fish. In both cases, however, the water itself is the principal contamination source, and food is not of major importance; only the intake path varies. In both freshwater and seawater areas not directly affected by waste discharge, the 90 Sr content in fish was observed to rise until 1966, when it began to drop. Maximum values of 42000 pCi/kg live weigth were recorded in the skeletons of lacustrine fish. The mean concentration factors are 20 for marine fish and 300 for freshwater fish, while the biological half-lives are 138 days and 2 years, respectively. This bibliographic synthesis clearly demonstrates the need to determine baseline conditions prior to reactor divergence, and to make sufficient allowance for the local ecological characteristics of each site [fr

  2. Bibliographic study of radiostrontium uptake capacity and processes in fish

    International Nuclear Information System (INIS)

    Pally, Monique; Foulquier, Luc

    1979-09-01

    This report is a synthesis of published work on the contamination of fish by radiostrontium, covering 143 publications and reports. The authors highlight the most important findings, since past activity levels in fish allow the effects of future discharges to be estimated. Both marine and freshwater environments are analyzed. The radiostrontium activity is evaluated in fish from zones both directly and not directly affected by liquid effluent discharges. Quantitative data is cited for the concentration factors and biological half lives determined from field measurements and laboratory experiments. Physiological phenomena discussed include contamination kinetics, radiostrontium distribution in fish organisms and the extent of transfer through food chains. The effects of biological factors (age, weight, species) and environmental factors (temperature, salinity, influence of stable elements) are examined. The radiostrontium uptake potential is higher in fresh water fish than in marine fish. In both cases, however, the water itself is the principal contamination source, and food is not of major importance; only the intake path varies. In both freshwater and seawater areas not directly affected by waste discharge, the 90 Sr content in fish was observed to rise until 1966, when it began to drop. Maximum values of 42000 pCi/kg live weight were recorded in the skeletons of lacustrine fish. The mean concentration factors are 20 for marine fish and 300 for freshwater fish, while the biological half-lives are 138 days and 2 years, respectively. This bibliographic synthesis clearly demonstrates the need to determine baseline conditions prior to reactor divergence, and to make sufficient allowance for the local ecological characteristics of each site [fr

  3. Laser fusion hybrid reactor systems study

    International Nuclear Information System (INIS)

    1976-07-01

    The work was performed in three phases. The first phase included a review of the many possible laser-reactor-blanket combinations and resulted in the selection of a ''demonstration size'' 500 MWe plant for further study. A number of fast fission blankets using uranium metal, uranium-molybdenum alloy, and uranium carbide as fuel were investigated. The second phase included design of the reactor vessel and internals, heat transfer system, tritium processing system, and the balance of plant, excluding the laser building and equipment. A fuel management scheme was developed, safety considerations were reviewed, and capital and operating costs were estimated. Costs developed during the second phase were unexpectedly high, and a thorough review indicated considerable unit cost savings could be obtained by scaling the plant to a larger size. Accordingly, a third phase was added to the original scope, encompassing the redesign and scaling of the plant from 500 MWe to 1200 MWe

  4. Nuclear Hybrid Energy Systems Regional Studies: West Texas & Northeastern Arizona

    Energy Technology Data Exchange (ETDEWEB)

    Garcia, Humberto E. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Chen, Jun [Idaho National Lab. (INL), Idaho Falls, ID (United States); Kim, Jong Suk [Idaho National Lab. (INL), Idaho Falls, ID (United States); McKellar, Michael George [Idaho National Lab. (INL), Idaho Falls, ID (United States); Deason, Wesley R [Idaho National Lab. (INL), Idaho Falls, ID (United States); Vilim, Richard B. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Bragg-Sitton, Shannon M. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Boardman, Richard D. [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2015-04-01

    The primary objective of this study is to conduct a preliminary dynamic analysis of two realistic hybrid energy systems (HES) including a nuclear reactor as the main baseload heat generator (denoted as nuclear HES or nuclear hybrid energy systems [[NHES]) and to assess the local (e.g., HES owners) and system (e.g., the electric grid) benefits attainable by the application of NHES in scenarios with multiple commodity production and high penetration of renewable energy. It is performed for regional cases not generic examples based on available resources, existing infrastructure, and markets within the selected regions. This study also briefly addresses the computational capabilities developed to conduct such analyses, reviews technical gaps, and suggests some research paths forward.

  5. Hybrid Risk Management Methodology: A Case Study

    Directory of Open Access Journals (Sweden)

    Jacky Siu-Lun Ting

    2009-10-01

    Full Text Available Risk management is a decision-making process involving considerations of political, social, economic and engineering factors with relevant risk assessments relating to a potential hazard. In the last decade, a number of risk management tools are introduced and employed to manage and minimize the uncertainty and threats realization to the organizations. However, the focus of these methodologies are different; in which companies need to adopt various risk management principles to visualize a full picture of the organizational risk level. Regarding to this, this paper presents a new approach of risk management that integrates Hierarchical Holographic Modeling (HHM, Enterprise Risk Management (ERM and Business Recovery Planning (BCP for identifying and assessing risks as well as managing the consequences of realized residual risks. To illustrate the procedures of the proposed methodology, a logistic company ABC Limited is chosen to serve as a case study Through applying HHM and ERM to investigate and assess the risk, ABC Limited can be better evaluated the potential risks and then took the responsive actions (e.g. BCP to handle the risks and crisis in near future.

  6. Ecotoxicity studies in Jamaican environment I. Toxicity, bioaccumulation, elimination and tissue partitioning of ethoprophos by the fish Tilapia in brackish water microcosm

    International Nuclear Information System (INIS)

    Robinson, D.E.; Mansingh, A.

    1999-01-01

    The present study was conducted on the toxicity of ethoprophos to sexually mature red hybrid Tilapia. The NOEC and LOEC were 1 and 4 mg/L of ethoprophos; the 24-h LC 50 and LC 95 values were 8.41 and 21.00 mg/L. Bioconcentration of the insecticide from NOEC and LOEC in the surrounding water by the fish peaked (3.25'' 0.412 and 12.50'' 1.831 μg/g, respectively) eight to twelve hours after exposure. Bioconcentration from LOEC was 3.8-fold greater than at NOEC. The contaminated fish (after 24-h exposure to LOEC) eliminated 83% of the ethoprophos residues within 12-h exposure to uncontaminated water. The order of partitioning of ethoprophos in the different tissues of the fish was gonads > liver > gut > gills > skin-muscle-bone. (author)

  7. Allergy to fish parvalbumins: studies on the cross-reactivity of allergens from 9 commonly consumed fish.

    Science.gov (United States)

    Van Do, Thien; Elsayed, Said; Florvaag, Erik; Hordvik, Ivar; Endresen, Curt

    2005-12-01

    Fish-hypersensitive patients can probably tolerate some fish species while being allergic to others. To determine the allergenic cross-reactivity between 9 commonly edible fish: cod, salmon, pollack, mackerel, tuna, herring, wolffish, halibut, and flounder. Sera from 10 patients allergic to fish and rabbit antisera against 3 parvalbumins (Gad c 1, Sal s 1, and The c 1) were used. Cross-reactivity was investigated by SDS/PAGE and IgE immunoblotting, IgG ELISA, IgE ELISA inhibition, and skin prick test (SPT). Cod (Gad c 1), salmon (Sal s 1), pollack (The c 1), herring, and wolffish share antigenic and allergenic determinants as shown by immunoblots and IgE ELISA, whereas halibut, flounder, tuna, and mackerel displayed lowest cross-reactivities. The highest mean IgE ELISA inhibition percent of 10 sera was obtained by Gad c 1, followed by The c 1, herring, Sal s 1, wolffish, halibut, flounder, tuna, and mackerel with the least inhibition. Nine of the 10 patients showed positive SPT to cod, salmon, and pollack; 8 patients reacted to recombinant (r) Sal s 1. Positive SPTs to rGad c 1 and rThe c 1 were demonstrated in 1 patient. Gad c 1, Sal s 1, The c 1, herring, and wolffish contained the most potent cross-reacting allergens, whereas halibut, flounder, tuna, and mackerel were the least allergenic in the current study. The latter could probably be tolerated by some of the tested patients.

  8. The application of radiography to the study of fish nutrition

    International Nuclear Information System (INIS)

    Carter, C.G.; Houlihan, D.F.; Fonseca, M.; Perera, W.M.K.; Sillah, A.B.S.; McCarthy, I.D.

    1995-01-01

    The measurement of individual food consumption rates of fish held in groups using radiography has enabled the development of a new approach to fish nutrition trials. In order to compare diets, groups of individually numbered fish are fed different experimental diets over extended periods of time (similar to standard nutrition trials) and food consumption rates are measured regularly over the course of the experiment. Analysis of covariance is then used to compare regression coefficients, obtained from mean consumption-growth relationships, from each diet. The advantages of the approach are several: (1) differences in appetite between fish fed different diets are monitored; (2) fewer fish are needed to establish consumption-growth curves over a large range of consumption rates; (3) measured food consumption rates, not ration levels, are used to calculate ‘true’ growth efficiencies; and (4) other factors, such as absorption efficiency, trypsin activity, the concentration of free amino acids in tissues and protein turnover can be measured for individual fish and related to differences in food consumption between fish in the same group. The approach has been used successfully with a variety of species to compare the growth response of groups fed two or more diets

  9. Case Study of Trash Fish under Environmental Stress for Their Survival and Utilization

    OpenAIRE

    Tehseen Ahmed; Imran Malik; Qazi Jahnzeb; Khalid Ahmed; Rafia Azmat

    2008-01-01

    The intention of this study was to describe nutritional status of a low value/trash fish which have a low commercial value by virtue of their low consumer preference, low quality and small size. This research provided the important information about the hazards of environments on low valued fish and discussed survival of trash fish with the importance and significance of minerals and nutrition like sodium, potassium, calcium, moisture, total protein, total fat, ash and calorific value w...

  10. Study of a SOFC-PEM hybrid system

    International Nuclear Information System (INIS)

    Fillman, B.; Bjornbom, P.; Sylwan, C.

    2004-01-01

    'Full text:' In the present project a system study of a SOFC-PEM hybrid system is in progress. Positive synergy effects are expected when combining a SOFC system with a PEM system. By combining the advantages of each fuel cell type it is promising that the hybrid system has higher overall efficiency than a SOFC-only system or a reformer-PEM system. A SOFC stack produces electricity and a reformate gas that can be further processed to hydrogen by the shift reaction. The produced hydrogen can be used by PEM stack in order to produce further electricity. In the PEM system case the complex fuel reformer processing could be eliminated. The simulations were performed with the flowsheeting simulation software Aspen Plus. (author)

  11. Evaluation of hybrid power system alternatives: a case study

    International Nuclear Information System (INIS)

    Rosenthal, Andrew L.

    1999-01-01

    Pursuant to executive and statutory policies, the National Park Service (NPS) has been evaluating the use of photovoltaic (PV) hybrid power systems, for many of its remote, off-grid areas. This paper reports the results of a detailed technical and economic evaluation for one such area: the Needles District of Canyonlands National Park. The study evaluates the presented power systems and five alternative power generation configurations, four of which utilise PV. Projections are provided for the generator run-time and fuel use associated with each configuration as well as all initial and future costs. Included in the study are specific recommendations for energy efficiency improvements at the site. Results show that the generation systems presently in use, two full-time diesel generators, has the lowest conventional 20-year life cycle costs (LCC) of the six systems evaluated. However, when emissions costs are included (per NPS guidelines), several of the PV hybrid alternatives attain a lower LCC than the diesel-only systems. General discussion of the effects of initial versus future costs of PV hybrids as they compare with engine generator system is presented. (Author)

  12. Apparent digestibility of Asian carp and common carp-derived fish meals in feeds for hybrid striped bass Morone saxatilis female x M. chrysops male and rainbow trout Oncorhynchus mykiss

    Science.gov (United States)

    Apparent digestibility coefficients (ADCs) of nutrients (crude protein, amino acids, crude lipid, fatty acids, and minerals) were determined for fish meals derived from menhaden, Asian carp (combination of silver and bighead carps), and common carp in feeds for hybrid striped bass and rainbow trout....

  13. Preliminary studies in rice-fish culture in a rainfed lowland ecology ...

    African Journals Online (AJOL)

    Preliminary studies in rice-fish culture in a rainfed lowland ecology in Ghana. PKA Dartey, RK Bam, J Ofori. Abstract. Mixed farms of rice and fish are yet to receive attention in Ghana, despite lowland rice being grown under inundation in most areas nationwide. In a preliminary study, Nile tilapia (Oreochromis niloticus) was ...

  14. Limnological study with reference to fish culture of Bothali (Mendha) reservoir, district - Gadchiroli (India).

    Science.gov (United States)

    Tijare, Rajendra V

    2012-04-01

    Limnological study with reference to fish culture was carried out at Bothali (Mendha) reservoir, district Gadchiroli, India. Water samples from different sampling locations were collected and processed for physico-chemical analysis. The physico-chemical analysis revealed that the reservoir is favourable for fish culture as the phosphate content in water is moderate in amount. This reservoir can produce a good yield of fishes. Though the reservoir is presently exploited and is under pisciculture, a better treatment of the reservoir such as prevention of entry of organic matter, reduction of phosphate ion concentration to certain extent is necessary to obtain a maximum fish yield.

  15. Long-term feeding studies in mice fed a diet containing irradiated fish. II

    International Nuclear Information System (INIS)

    Benson, H.G.; Miller, T.J.; Gottschalk, H.M.; Elias, P.S.

    1980-01-01

    Three groups of mice (Fsub(2b) generation of Part I study) were fed for 90 days, either stock ration or diets containing 45% fish, either non-irradiated or irradiated with 1.75 kGy. Equal amounts of cod and redfish (ocean perch) constituted the fish portion of the diet. Haematological and clinical chemical examinations revealed no treatment-related effects. There were no untoward terminal gross or histopathological changes. An initial lag in weight gain of males fed fish diets was attibuted to reduced food consumption, due to the difference in texture of the fish diets compared with the stock ration. (Auth.)

  16. COI (cytochrome oxidase-I) sequence based studies of Carangid fishes from Kakinada coast, India.

    Science.gov (United States)

    Persis, M; Chandra Sekhar Reddy, A; Rao, L M; Khedkar, G D; Ravinder, K; Nasruddin, K

    2009-09-01

    Mitochondrial DNA, cytochrome oxidase-1 gene sequences were analyzed for species identification and phylogenetic relationship among the very high food value and commercially important Indian carangid fish species. Sequence analysis of COI gene very clearly indicated that all the 28 fish species fell into five distinct groups, which are genetically distant from each other and exhibited identical phylogenetic reservation. All the COI gene sequences from 28 fishes provide sufficient phylogenetic information and evolutionary relationship to distinguish the carangid species unambiguously. This study proves the utility of mtDNA COI gene sequence based approach in identifying fish species at a faster pace.

  17. Summary of the Big Lost River fish study on the Idaho National Engineering Laboratory Site

    International Nuclear Information System (INIS)

    Overton, C.K.; Johnson, D.W.

    1978-01-01

    Winter fish mortality and fish migration in the Big Lost River were related to natural phenomenon and man-created impacts. Low winter flows resulted in a reduction in habitat and increased rainbow trout mortality. Man-altered flows stimulated movement and created deleterious conditions. Migratory patterns were related to water discharge and temperature. A food habit study of three sympatric salmonid fishes was undertaken during a low water period. The ratio of food items differed between the three species. Flesh of salmonid fishes from within the INEL Site boundary was monitored for three years for radionuclides. Only one trout contained Cs-137 concentrations above the minimum detection limits

  18. Study on erosion behaviour of hybrid aluminium composite

    Science.gov (United States)

    Vishwas, D. K.; Chandrappa, C. N.; Venkatesh, Shreyas

    2018-04-01

    The origin of the light metals, as compared to other metals in this century, is noticeable and an exciting area of expansion for innovation. Light metals, are need of the day in engineering, among them application of aluminium and its alloys is enormous. we observe that these metals tend to have a progressive loss of metal from having contact surface with other metals. Erosion is one such wear process, where damage occurs by the repeated application of high localised stresses. Erosion due to impact of solid particle, is a significant problem. In the present work, the erosion behaviour of hybrid aluminium composite is studied. AL 6061 is used as the base alloy. AL 6061 alloy has excellent corrosion resistance but poor wear resistance. So, in order to have improved properties, it is reinforced with Tungsten Chromium Nickel powder in varied proportions by the method of stir casting. The results are compared with the as-cast Al-alloy to determine the improvement in mechanical properties. The tests were conducted in ASTM G76 setup, to determine solid particle erosion behaviour and the results of the hybrid composite were compared with that of as-cast AL 6061 alloy. It was evident that mass loss was maximum at 300 inclinations, which is a characteristic of ductile materials. It was observed that upon increasing the percentages of reinforcement (wt.%), the wear resistance of the hybrid composite increased significantly. It was also observed that the inclusion of tungsten-chromium-nickel powder increased the hardness of the hybrid composite significantly.

  19. Basic Methods for the Study of Reproductive Ecology of Fish in Aquaria.

    Science.gov (United States)

    Fukuda, Kazuya; Sunobe, Tomoki

    2017-07-20

    Captive-rearing observations are valuable for revealing aspects of fish behavior and ecology when continuous field investigations are impossible. Here, a series of basic techniques are described to enable observations of the reproductive behavior of a wild-caught gobiid fish, as a model, kept in an aquarium. The method focuses on three steps: collection, transport, and observations of reproductive ecology of a substrate spawner. Essential aspects of live fish collection and transport are (1) preventing injury to the fish, and (2) careful acclimation to the aquarium. Preventing harm through injuries such as scratches or a sudden change of water pressure is imperative when collecting live fish, as any physical damage is likely to negatively affect the survival and later behavior of the fish. Careful acclimation to aquaria decreases the incidence death and mitigates the shock of transport. Observations during captive rearing include (1) the identification of individual fish and (2) monitoring spawned eggs without negative effects to the fish or eggs, thereby enabling detailed investigation of the study species' reproductive ecology. The subcutaneous injection of a visible implant elastomer (VIE) tag is a precise method for the subsequent identification of individual fish, and it can be used with a wide size range of fish, with minimal influence on their survival and behavior. If the study species is a substrate spawner that deposits adhesive eggs, an artificial nest site constructed from polyvinyl chloride (PVC) pipe with the addition of a removable waterproof sheet will facilitate counting and monitoring the eggs, lessening the investigator's influence on the nest-holding and egg-guarding behavior of the fish. Although this basic method entails techniques that are seldom mentioned in detail in research articles, they are fundamental for undertaking experiments that require the captive rearing of a wild fish.

  20. Electric and hybrid vehicles environmental control subsystem study

    Science.gov (United States)

    1981-01-01

    An environmental control subsystem (ECS) in the passenger compartment of electric and hybrid vehicles is studied. Various methods of obtaining the desired temperature control for the battery pack is also studied. The functional requirements of ECS equipment is defined. Following categorization by methodology, technology availability and risk, all viable ECS concepts are evaluated. Each is assessed independently for benefits versus risk, as well as for its feasibility to short, intermediate and long term product development. Selection of the preferred concept is made against these requirements, as well as the study's major goal of providing safe, highly efficient and thermally confortable ECS equipment.

  1. Leptin stimulates hepatic growth hormone receptor and insulin-like growth factor gene expression in a teleost fish, the hybrid striped bass.

    Science.gov (United States)

    Won, Eugene T; Douros, Jonathan D; Hurt, David A; Borski, Russell J

    2016-04-01

    Leptin is an anorexigenic peptide hormone that circulates as an indicator of adiposity in mammals, and functions to maintain energy homeostasis by balancing feeding and energy expenditure. In fish, leptin tends to be predominantly expressed in the liver, another important energy storing tissue, rather than in fat depots as it is in mammals. The liver also produces the majority of circulating insulin-like growth factors (IGFs), which comprise the mitogenic component of the growth hormone (GH)-IGF endocrine growth axis. Based on similar regulatory patterns of leptin and IGFs that we have documented in previous studies on hybrid striped bass (HSB: Morone saxatilis×Morone chrysops), and considering the co-localization of these peptides in the liver, we hypothesized that leptin might regulate the endocrine growth axis in a manner that helps coordinate somatic growth with energy availability. Using a HSB hepatocyte culture system to simulate autocrine or paracrine exposure that might occur within the liver, this study examines the potential for leptin to modulate metabolism and growth through regulation of IGF gene expression directly, or indirectly through the regulation of GH receptors (GHR), which mediate GH-induced IGF expression. First, we verified that GH (50nM) has a classical stimulatory effect on IGF-1 and additionally show it stimulates IGF-2 transcription in hepatocytes. Leptin (5 and/or 50nM) directly stimulated in vitro GHR2 gene expression within 8h of exposure, and both GHR1 and GHR2 as well as IGF-1 and IGF-2 gene expression after 24h. Cells were then co-incubated with submaximal concentrations of leptin and GH (25nM each) to test if they had a synergistic effect on IGF gene expression, possibly through increased GH sensitivity following GHR upregulation by leptin. In combination, however, the treatments only had an additive effect on stimulating IGF-1 mRNA despite their capacity to increase GHR mRNA abundance. This suggests that leptin's stimulatory

  2. Studies on some fish parasites of public health importance in the southern area of Saudi Arabia

    Directory of Open Access Journals (Sweden)

    Mokhtar Ibrahim Khalil

    2014-12-01

    Full Text Available The present study was the first attempt to survey the diversity of fish zoonotic parasites in the southern region of Saudi Arabia, particularly the Najran area, from October 2012 to October 2013. Approximately 163 fish representing seven species (two of freshwater fish and five of marine fish were examined for fish-borne trematode metacercariae using the compression technique, and for zoonotic nematode larvae. Adult flukes were obtained from cats experimentally infected with the metacercariae on day 25 post-infection The prevalence of each parasite species was recorded. The parasites found belonged to two taxa: Digenea (Heterophyes heterophyes and Haplorchis pumilio in muscle tissue; and nematodes (larvae of Capillaria sp. in the digestive tract. The morphological characteristics of the fish-borne trematode metacercariae and their experimentally obtained adults were described. This is the first report of these parasites in fish in Saudi Arabia. Moreover, Myripristis murdjan presented higher prevalence of Capillaria sp. infection (22.7%, while Haplorchis pumilio was the dominant metacercarial species (7.9%. Although the number of documented cases continues to increase, the overall risk of human infection is slight. The increasing exploitation of the marine environment by humans and the tendency to reduce cooking times when preparing seafood products both increase the chances of becoming infected with these parasites. Furthermore, our results indicate that certain fish production systems are at risk of presenting fish zoonotic parasites, and that control approaches will benefit from understanding these risk factors.

  3. Studies on some fish parasites of public health importance in the southern area of Saudi Arabia.

    Science.gov (United States)

    Khalil, Mokhtar Ibrahim; El-Shahawy, Ismail Saad; Abdelkader, Hussein Saad

    2014-01-01

    The present study was the first attempt to survey the diversity of fish zoonotic parasites in the southern region of Saudi Arabia, particularly the Najran area, from October 2012 to October 2013. Approximately 163 fish representing seven species (two of freshwater fish and five of marine fish) were examined for fish-borne trematode metacercariae using the compression technique, and for zoonotic nematode larvae. Adult flukes were obtained from cats experimentally infected with the metacercariae on day 25 post-infection The prevalence of each parasite species was recorded. The parasites found belonged to two taxa: Digenea (Heterophyes heterophyes and Haplorchis pumilio) in muscle tissue; and nematodes (larvae of Capillaria sp.) in the digestive tract. The morphological characteristics of the fish-borne trematode metacercariae and their experimentally obtained adults were described. This is the first report of these parasites in fish in Saudi Arabia. Moreover, Myripristis murdjan presented higher prevalence of Capillaria sp. infection (22.7%), while Haplorchis pumilio was the dominant metacercarial species (7.9%). Although the number of documented cases continues to increase, the overall risk of human infection is slight. The increasing exploitation of the marine environment by humans and the tendency to reduce cooking times when preparing seafood products both increase the chances of becoming infected with these parasites. Furthermore, our results indicate that certain fish production systems are at risk of presenting fish zoonotic parasites, and that control approaches will benefit from understanding these risk factors.

  4. Design tradeoff studies and sensitivity analysis. Appendices B1-B4. [HYBRID

    Energy Technology Data Exchange (ETDEWEB)

    1979-05-25

    These four appendices to the report on the Near-Term Hybrid Vehicle (NTHV) report contain information on: HYBRID computer program documentation; material substitution study for advanced hybrid vehicles; NTHV market potential; battery compartment weight distribution; and vehicle handling dynamics. (LCL)

  5. Management of Artisanal Fishing Port: a Case Study on Labuhanhaji Fishing Port, South Aceh Regency, Aceh Province

    OpenAIRE

    NurJannah, Betri; ', Syaifuddin; Zain, Jonny

    2014-01-01

    A series survey activity was carried out for evaluating management function atlabuanhaji fishing port, South Aceh regency. This research was emphasis on planning, organizing, action and controlling at management pattern of labuhanhaji fishing port. The facilities of fishing port data and daily activities description of staff at labuhanhaji fishing port was used as additional information and consideration in management of labuhanhaji fishing port. Lack of good management was impact on staff an...

  6. Fish intake and risk of heart failure: A meta-analysis of five prospective cohort studies

    Science.gov (United States)

    HOU, LI-NA; LI, FEI; ZHOU, YOU; NIE, SHI-HUAI; SU, LIANG; CHEN, PING-AN; TAN, WAN-LONG; XU, DING-LI

    2012-01-01

    The findings on the association between fish intake and the risk of heart failure (HF) have been inconsistent. The purpose of this study was to clarify this potential association. We searched for relevant studies in the PubMed database through January 2012 and manually reviewed references. Five independent prospective cohort studies involving 5,273 cases and 144,917 participants were included. The summary relative risk estimates (SRRE) based on the highest compared with the lowest category of fish consumption were estimated by variance-based meta-analysis. In addition, we performed sensitivity and dose-response analyses to examine the association. Overall, an absence of an association between fish intake and HF was observed (SRRE=1.00; 95% CI, 0.81–1.24). However, fried fish intake positively associated with HF (SRRE=1.40; 95% CI, 1.22–1.61). In addition, dose-response analysis of fried fish suggested that each increment of six fried fish per month corresponded to a 37% increase of HF rate (RR=1.37; 95% CI, 1.20–1.56). In conclusion, our findings suggest that there is no significant association between fish intake and risk of HF, with the exception of a possible positive correlation with individuals comsuming fried fish, based on a limited number of studies. Future studies are required to confirm these findings. PMID:23181122

  7. Study of a class of hybrid-time systems

    Energy Technology Data Exchange (ETDEWEB)

    Cervantes, I. [Seccion de Estudios de Posgrado e Investigacion, Escuela Superior de Ingenieria Mecanica y Electrica-Culhuacan-IPN, Av. San Ana 1000 Col. San Fco. Culhuacan, Mexico D.F. 04430 (Mexico) and Insituto Potosino de Investigacion Cientifica y Tecnologica (IPICyT), Departamento de Matematicas Aplicadas y Sistemas Computacionales, Camino a la Presa San Jose 2055, Col. Lomas 4a, seccion C.P. 78216, San Luis Potosi, San Luis Potosi (Mexico)]. E-mail: ilse@calmecac.esimecu.ipn.mx; Femat, R. [Insituto Potosino de Investigacion Cientifica y Tecnologica (IPICyT), Departamento de Matematicas Aplicadas y Sistemas Computacionales, Camino a la Presa San Jose 2055, Col. Lomas 4a, seccion C.P. 78216, San Luis Potosi, San Luis Potosi (Mexico); Leyva-Ramos, J. [Insituto Potosino de Investigacion Cientifica y Tecnologica (IPICyT), Departamento de Matematicas Aplicadas y Sistemas Computacionales, Camino a la Presa San Jose 2055, Col. Lomas 4a, seccion C.P. 78216, San Luis Potosi, San Luis Potosi (Mexico)

    2007-05-15

    The aim of this paper is to study the dynamic behavior of a class of hybrid-time systems. In particular, we concern about switched systems constituted by two linear second order systems with a time varying (sinusoidal type) translation term. By means of numerical simulations, system behavior and its relation to system parameters are studied. It is shown that system eigenvalues play a crucial role in the time evolution of the system leading either to regular behavior, oscillatory patterns or intermittent erratic-periodic behavior. Furthermore, it is shown that under certain conditions, presumable fractal structures can be obtained.

  8. Study of a class of hybrid-time systems

    International Nuclear Information System (INIS)

    Cervantes, I.; Femat, R.; Leyva-Ramos, J.

    2007-01-01

    The aim of this paper is to study the dynamic behavior of a class of hybrid-time systems. In particular, we concern about switched systems constituted by two linear second order systems with a time varying (sinusoidal type) translation term. By means of numerical simulations, system behavior and its relation to system parameters are studied. It is shown that system eigenvalues play a crucial role in the time evolution of the system leading either to regular behavior, oscillatory patterns or intermittent erratic-periodic behavior. Furthermore, it is shown that under certain conditions, presumable fractal structures can be obtained

  9. Chromosomes of Iberian Leuciscinae (Cyprinidae) Revisited: Evidence of Genome Restructuring in Homoploid Hybrids Using Dual-Color FISH and CGH

    Czech Academy of Sciences Publication Activity Database

    Pereira, C. S.; Ráb, Petr; Collares-Pereira, M. J.

    2013-01-01

    Roč. 141, 2/3 (2013), s. 143-152 ISSN 1424-8581 R&D Projects: GA ČR GA13-37277S Institutional support: RVO:67985904 Keywords : CGH/GISH * Chondrostoma s.I. * genome reshuffling hybridization Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.905, year: 2013

  10. Studies on importance of using meat, fish and their derivates in athletes diet

    Directory of Open Access Journals (Sweden)

    Sorin Barbuica

    2015-05-01

    Full Text Available Due to the high nutritional value and especially due to its class I protein content, meat and fish are needed during exercise and sports especially during speed and strength exercises. This paper presents a study on the use of meat, fish and their derivatives in Athletes diet.

  11. Increasing fish consumption does not affect genotoxicity markers in the colon in an intervention study

    NARCIS (Netherlands)

    Pot, G.K.; Habermann, N.; Majsak-Newman, G.; Harvey, L.J.; Geelen, A.; Przybylska-Philips, P.; Nagengast, F.M.; Witteman, B.J.M.; van de Meeberg, P.C.; Hart, A.R.; Schaafsma, G.; Hooiveld, G.; Glei, M.; Lund, E.K.; Pool-Zobel, B.; Kampman, E.

    2010-01-01

    Observational studies suggest that fish consumption is associated with a decreased colorectal cancer (CRC) risk. A possible mechanism by which fish could reduce CRC risk is by decreasing colonic genotoxicity. However, concerns have also been raised over the levels of toxic compounds found in mainly

  12. An open circuit balance respirometer for bioenergetic studies of fish growth

    NARCIS (Netherlands)

    Hogendoorn, H.; Korlaar, van F.; Bosch, H.

    1981-01-01

    A description is given of an open circuit balance respirometer for bioenergetic studies of fish growth using indirect calorimetry. The installation was designed to enable the determination of gas and matter balances of fish, including air breathing species, during prolonged experimental periods.

  13. Preliminary studies in rice-fish culture in a rainfed lowland ecology ...

    African Journals Online (AJOL)

    Mixed farms of rice and fish are yet to receive attention in Ghana, despite lowland rice being grown under inundation in most areas nationwide. In a preliminary study, Nile tilapia (Oreochromis niloticus) was successfully cultured in a rainfed lowland rice farm, although no additional care was provided for fishes. The highest ...

  14. Reliability of sport fish consumption in the New York State Angler Cohort Study

    International Nuclear Information System (INIS)

    Li Qiang; Vena, J.E.; Swanson, M.K.

    2005-01-01

    This paper examines the reliability of sport fish consumption data from the New York State Angler Cohort Study (NYSACS). NYSACS is a prospective cohort study conducted among New York State registered sportsmen and fishermen. Sport fish consumption information for New York State waters including the Great Lakes between June 1990 and June 1991 were collected through self-administered questionnaires, Spouses of male anglers were asked to provide their husbands' fish consumption during the same time period. A short telephone interview after the cohort was ascertained was also conducted among about 100 study participants for the purpose of quality control. Percentage agreement, kappa, and weighted kappa were calculated to evaluate the reliability of the interview using spousal data and reinterview data. Overall, for the total fish consumption between June 1990 and June 1991, percentage agreement, kappa, and weighted kappa between spousal data and primary response were 67.28%, 0.5087, and 0.6157, respectively. For reinterview data, weighted kappa ranged from 0.4510 to 0.5285 for season-specific analysis and kappa ranged from 0.4615 to 0.7006 for fish species-specific analysis. Spouses may be a good source of proxy data for fish consumption. The reliability of sport fish consumption data for the NYSACS study is acceptable, suggesting that the food frequency measuring methods employed are a viable approach to obtain retrospective sport fish consumption data from sportsmen and subsistence anglers

  15. Increasing fish consumption does not affect genotozicity markers in the colon in an intervention study

    NARCIS (Netherlands)

    Pot, G.K.; Habermann, N.; Majsak-Newman, G.; Harvey, L.J.; Geelen, A.; Witteman, B.J.M.; Meeberg, van de P.C.; Hart, A.R.; Schaafsma, G.; Hooiveld, G.J.E.J.; Glei, M.; Lund, E.K.; Pool-Zobel, B.L.; Kampman, E.

    2010-01-01

    Observational studies suggest that fish consumption is associated with a decreased colorectal cancer (CRC) risk. A possible mechanism by which fish could reduce CRC risk is by decreasing colonic genotoxicity. However, concerns have also been raised over the levels of toxic compounds found in mainly

  16. Specific Fluorescence in Situ Hybridization (FISH) Test to Highlight Colonization of Xylem Vessels by Xylella fastidiosa in Naturally Infected Olive Trees (Olea europaea L.)

    Science.gov (United States)

    Cardinale, Massimiliano; Luvisi, Andrea; Meyer, Joana B.; Sabella, Erika; De Bellis, Luigi; Cruz, Albert C.; Ampatzidis, Yiannis; Cherubini, Paolo

    2018-01-01

    The colonization behavior of the Xylella fastidiosa strain CoDiRO, the causal agent of olive quick decline syndrome (OQDS), within the xylem of Olea europaea L. is still quite controversial. As previous literature suggests, even if xylem vessel occlusions in naturally infected olive plants were observed, cell aggregation in the formation of occlusions had a minimal role. This observation left some open questions about the whole behavior of the CoDiRO strain and its actual role in OQDS pathogenesis. In order to evaluate the extent of bacterial infection in olive trees and the role of bacterial aggregates in vessel occlusions, we tested a specific fluorescence in situ hybridization (FISH) probe (KO 210) for X. fastidiosa and quantified the level of infection and vessel occlusion in both petioles and branches of naturally infected and non-infected olive trees. All symptomatic petioles showed colonization by X. fastidiosa, especially in the larger innermost vessels. In several cases, the vessels appeared completely occluded by a biofilm containing bacterial cells and extracellular matrix and the frequent colonization of adjacent vessels suggested a horizontal movement of the bacteria. Infected symptomatic trees had 21.6 ± 10.7% of petiole vessels colonized by the pathogen, indicating an irregular distribution in olive tree xylem. Thus, our observations point out the primary role of the pathogen in olive vessel occlusions. Furthermore, our findings indicate that the KO 210 FISH probe is suitable for the specific detection of X. fastidiosa. PMID:29681910

  17. Lean fish consumption is associated with lower risk of metabolic syndrome: a Norwegian cross sectional study.

    Science.gov (United States)

    Tørris, C; Molin, M; Cvancarova, M Småstuen

    2016-04-19

    Fish consumption may have a role in reducing the prevalence of metabolic syndrome (MetS). The aim of this study was to identify associations between fish consumption and MetS and its components, especially regarding differences concerning consumption of fatty and lean fish. This cross sectional study uses data from the Tromsø 6 survey (2007-08), where a sample of 12 981 adults, aged 30-87 years (47 % men) from the Norwegian general population was included. Fish consumption was assessed using food frequency questionnaires (FFQ). Blood sample assessments, anthropometric and blood pressure measurements were carried out according to standard protocols. MetS was defined using the Joint Interim Societies (JIS) definition. All tests were two-sided. Analyses were performed using IBM SPSS Statistics 22 (Pearson's correlation, Chi-Square tests, analysis of variance (ANOVA), linear and logistic regression models). Mean age was 57.5, and the prevalence of MetS was 22.6 %. Fish consumption once a week or more was associated with lower risk of having MetS among men (OR 0.85, CI 95 % 0.74 to 0.98, P = 0.03). In the adjusted models, lean fish consumption was associated with a decreased risk of having MetS, whereas fatty fish consumption was not associated with a decreased risk of having MetS. Both an increased fatty and lean fish consumption (0-1 times per month, 2-3 times per month, 1-3 times per week, 4-6 times per week, 1-2 times per day) were associated with decreased serum triglyceride (TG), and increased high-density lipoprotein cholesterol (HDL-C). Fish consumption may be associated with a lower risk of having MetS and consumption of lean fish seems to be driving the association. Further investigation is warranted to establish associations between fish consumption and MetS.

  18. Electric and hybrid vehicle environmental control subsystem study

    Science.gov (United States)

    Heitner, K. L.

    1980-01-01

    An environmental control subsystem (ECS) in electric and hybrid vehicles is studied. A combination of a combustion heater and gasoline engine (Otto cycle) driven vapor compression air conditioner is selected. The combustion heater, the small gasoline engine, and the vapor compression air conditioner are commercially available. These technologies have good cost and performance characteristics. The cost for this ECS is relatively close to the cost of current ECS's. Its effect on the vehicle's propulsion battery is minimal and the ECS size and weight do not have significant impact on the vehicle's range.

  19. Detection of MDM2/CDK4 amplification in lipomatous soft tissue tumors from formalin-fixed, paraffin-embedded tissue: comparison of multiplex ligation-dependent probe amplification (MLPA) and fluorescence in situ hybridization (FISH).

    Science.gov (United States)

    Creytens, David; van Gorp, Joost; Ferdinande, Liesbeth; Speel, Ernst-Jan; Libbrecht, Louis

    2015-02-01

    In this study, the detection of MDM2 and CDK4 amplification was evaluated in lipomatous soft tissue tumors using multiplex ligation-dependent probe amplification (MLPA), a PCR-based technique, in comparison with fluorescence in situ hybridization (FISH). These 2 techniques were evaluated in a series of 77 formalin-fixed, paraffin-embedded lipomatous tumors (27 benign adipose tumors, 28 atypical lipomatous tumors/well-differentiated liposarcomas, 18 dedifferentiated liposarcomas, and 4 pleomorphic liposarcomas). Using MLPA, with a cut-off ratio of >2, 36/71 samples (22 atypical lipomatous tumors/well-differentiated liposarcomas, and 14 dedifferentiated liposarcomas) showed MDM2 and CDK4 amplification. Using FISH as gold standard, MLPA showed a sensitivity of 90% (36/40) and a specificity of 100% (31/31) in detecting amplification of MDM2 and CDK4 in lipomatous soft tissue tumors. In case of high-level amplification (MDM2-CDK4/CEP12 ratio >5), concordance was 100%. Four cases of atypical lipomatous tumor/well-differentiated liposarcoma (4/26, 15%) with a low MDM2 and CDK4 amplification level (MDM2-CDK4/CEP12 ratio ranging between 2 and 2.5) detected by FISH showed no amplification by MLPA, although gain of MDM2 and CDK4 (ratios ranging between 1.6 and 1.9) was seen with MLPA. No amplification was detected in benign lipomatous tumors and pleomorphic liposarcomas. Furthermore, there was a very high concordance between the ratios obtained by FISH and MLPA. In conclusion, MLPA proves to be an appropriate and straightforward technique for screening MDM2/CDK4 amplification in lipomatous tumors, especially when a correct cut-off value and reference samples are chosen, and could be considered a good alternative to FISH to determine MDM2 and CDK4 amplification in liposarcomas. Moreover, because MLPA, as a multiplex technique, allows simultaneous detection of multiple chromosomal changes of interest, it could be in the future a very reliable and fast molecular analysis on

  20. Correlation Study of Magnetite Dissolution in Hybrid Decontamination Process

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Seon-Byeong; Won, Hui-Jun; Park, Jung-Sun; Park, Sang-Yoon; Moon, Jei-Kwon; Choi, Wang-Kyu [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2016-10-15

    In the operating plants, the localized corrosion on SG tubes which are transporters of thermal energy to the secondary side lowers the reduction heat transfer efficiency as well as degrades the lifetime of SG. Magnetite, Fe3O4, is a commonly found corrosion product on the inner surface of reactor coolant system. Simply magnetite can be reduced to hematite, Fe{sub 2}O{sub 3}, and further to iron when oxygen is limited or ample reducing agents are supplied. Along this line, number of decontamination processes has been developed since 1970s and most of them contain organic acid and additive chelating agents. However, many reports have pointed out the negative environmental effect of those chemicals, and currently there are new approaches to overcome the limited decontamination efficiency and large volume of secondary waste from other alternate processes without using such those organic chemicals. In present study, we investigated the magnetite dissolution in HyBRID solution as newly developing decontamination process. As a preliminary study for empirical modeling of decontamination by HyBRID solution, simply correlation study between variable and magnetite dissolution was introduced with studied mechanism and experimental results.

  1. Genetic incompatibility dampens hybrid fertility more than hybrid viability: yeast as a case study.

    Directory of Open Access Journals (Sweden)

    Meibo Xu

    Full Text Available Genetic incompatibility is believed to be the major cause of postzygotic reproductive isolation. Despite huge efforts seeking for speciation-related incompatibilities in the past several decades, a general understanding of how genetic incompatibility evolves in affecting hybrid fitness is not available, primarily due to the fact that the number of known incompatibilities is small. Instead of further mapping specific incompatible genes, in this paper we aimed to know the overall effects of incompatibility on fertility and viability, the two aspects of fitness, by examining 89 gametes produced by yeast S. cerevisiae-S. paradoxus F1 hybrids. Homozygous F2 hybrids formed by autodiploidization of F1 gametes were subject to tests for growth rate and sporulation efficiency. We observed much stronger defects in sporulation than in clonal growth for every single F2 hybrid strain, indicating that genetic incompatibility affects hybrid fertility more than hybrid viability in yeast. We related this finding in part to the fast-evolving nature of meiosis-related genes, and proposed that the generally low expression levels of these genes might be a cause of the observation.

  2. Variability of fish consumption within the 10 European countries participating in the European Investigation into Cancer and Nutrition (EPIC) study

    DEFF Research Database (Denmark)

    Welch, A.A.; Lund, E.; Amiano, P.

    2002-01-01

    was in the coastal areas of northern Europe (Denmark, Sweden and Norway) and in Germany. Consumption of fish products was greater in northern than in southern Europe, with white fish products predominating in centres in France, Italy, Spain, The Netherlands and Norway. Intake of roe and roe products was low......OBJECTIVE: To describe and compare the consumption of total fish (marine foods) and the fish sub-groups - white fish, fatty fish, very fatty fish, fish products and crustacea, in participants from the European Investigation into Cancer and Nutrition (EPIC) study. DESIGN: Cross-sectional analysis...... study. SUBJECTS: In total, 35 955 subjects (13 031 men and 22 924 women), aged 35-74 years, selected from the main EPIC cohort. RESULTS: A six- to sevenfold variation in total fish consumption exists in women and men, between the lowest consumption in Germany and the highest in Spain. Overall, white...

  3. Assessment of DNA damage and Chromosome aberration in human lymphocyte exposed to low dose radiation detected by FISH(Fluorescence In Situ Hybridization) and SCGE(Single Cell Gel Electrophoresis)

    International Nuclear Information System (INIS)

    Chung, Hai Won; Kim, Su Young; Kim, Byung Mo; Kim, Sun Jin; Ha, Sung Whan; Kim, Tae Hwan; Cho, Chul Koo

    2000-01-01

    Comparative study was performed for the assessment of DNA damage and Chromosomal aberration in human lymphocyte exposed to low dose radiation using Fluorescence In Situ Hybridization(FISH) and Single Cell Gel Electrophoresis(SCGE). Chromosomal aberrations in human lymphocyte exposed to radiation at doses of 5, 10, 30 and 50cGy were analysed with whole chromosome-specific probes by human chromosome 1, 2 and 4 according to PAINT system. FISH with chromosome-specific probe has been used to be a valid and rapid method for detection of chromosome rearrangements induced by low dose radiation. The frequencies of stable translocation per cell equivalents were 0.0116, 0.0375, 0.0407, 0.0727 and 0.0814 for 0, 5, 10, 30 and 50cGy, respectively, and those of dicentric were 0.00, 0.0125, 0.174, 0.0291 and 0.0407 respectively. Radiation induced DNA damage in human lymphocyte in a dose-dependent manner at low doses from 5cGy to 50cGy, which were analysed by single Cell Gel Electrophoresis(SCGE). From above results, FISH seemed to be useful for radiation biodosimetry by which the frequencies of stable aberrations in human lymphocyte can be observed more easily than by conventional method and SCGE also seemed to be sensitive method for detecting DNA damage by low dose radiation exposure, so that those methods will improve our technique to perform meaningful biodosimetry for radiation at low doses

  4. Solar central receiver hybrid power system. Phase I study

    Energy Technology Data Exchange (ETDEWEB)

    None

    1978-11-01

    A management plan is presented for implementation during the Solar Central Receiver Hybrid Power System - Phase I study project. The project plan and the management controls that will be used to assure technically adequate, timely and cost effective performance of the work required to prepare the designated end products are described. Bechtel in-house controls and those to be used in directing the subcontractors are described. Phase I of the project consists of tradeoff studies, parametric analyses, and engineering studies leading to conceptual definition and evaluation of a commercial hybrid power system that has the potential for supplying economically competitive electric power to a utility grid in the 1985-1990 time frame. The scope also includes the preparation of a development plan for the resolution of technical uncertainties and the preparation of plans and a proposal for Phase II of the program. The technical approach will be based on a central receiver solar energy collection scheme which supplies thermal energy to a combined cycle, generating system, consisting of a gas turbine cycle combined with a steam bottoming cycle by means of a heat recovery steam generator.

  5. Otolith Length-Fish Length Relationships of Eleven US Arctic Fish Species and Their Application to Ice Seal Diet Studies

    Science.gov (United States)

    Walker, K. L.; Norcross, B.

    2016-02-01

    The Arctic ecosystem has moved into the spotlight of scientific research in recent years due to increased climate change and oil and gas exploration. Arctic fishes and Arctic marine mammals represent key parts of this ecosystem, with fish being a common part of ice seal diets in the Arctic. Determining sizes of fish consumed by ice seals is difficult because otoliths are often the only part left of the fish after digestion. Otolith length is known to be positively related to fish length. By developing species-specific otolith-body morphometric relationships for Arctic marine fishes, fish length can be determined for fish prey found in seal stomachs. Fish were collected during ice free months in the Beaufort and Chukchi seas 2009 - 2014, and the most prevalent species captured were chosen for analysis. Otoliths from eleven fish species from seven families were measured. All species had strong linear relationships between otolith length and fish total length. Nine species had coefficient of determination values over 0.75, indicating that most of the variability in the otolith to fish length relationship was explained by the linear regression. These relationships will be applied to otoliths found in stomachs of three species of ice seals (spotted Phoca largha, ringed Pusa hispida, and bearded Erignathus barbatus) and used to estimate fish total length at time of consumption. Fish lengths can in turn be used to calculate fish weight, enabling further investigation into ice seal energetic demands. This application will aid in understanding how ice seals interact with fish communities in the US Arctic and directly contribute to diet comparisons among and within ice seal species. A better understanding of predator-prey interactions in the US Arctic will aid in predicting how ice seal and fish species will adapt to a changing Arctic.

  6. Move Over! Studying Flatfish Travel Patterns to Profile Fish Behavior

    Science.gov (United States)

    Aultman, Terry; Curran, Mary Carla

    2012-01-01

    The way an animal moves from place to place can inform us about its life and environment. In this lesson, students examine the travel patterns of juvenile flatfishes in an estuary. The process of sampling bottom-dwelling fishes is explained, and data from a university-based marine science laboratory are evaluated. Students compare the distance…

  7. Studies on African Characid Fishes I. The tribe Alestidi (I)

    NARCIS (Netherlands)

    Hoedeman, J.J.

    1951-01-01

    Among a recent importation from the Belgian Congo there was a multitude of lovely little aquariumfishes, mostly well-known to aquarists. but partly new to them, and some of these fishes even new to science. A large number of small ”Tetra’s” closely resembled the well-known species Petersius

  8. Using a Popular Pet Fish Species to Study Territorial Behaviour

    Science.gov (United States)

    Abante, Maria E.

    2005-01-01

    The colourful, vigorous territorial display behaviour of the Siamese fighting fish, "Betta splendens", has great appeal for both pet enthusiasts and animal behaviourists. Their beauty, longevity, easy maintenance and rearing make them a popular pet and an ideal science laboratory specimen. This investigation utilises "B. splendens" to test for the…

  9. Turbulence, larval fish ecology and fisheries recruitment : a review of field studies

    DEFF Research Database (Denmark)

    MacKenzie, Brian

    2000-01-01

    , and recruitment in entire populations. One of the main findings is that field studies show contrasting effects of turbulence on feeding, growth and mortality rates in nature and on recruitment. Coincident and multiple variations in ecosystem processes, lack of understanding of how some of these processes (e......Fish recruitment varies widely between years but much of this variability cannot be explained by most models of fish population dynamics. In this review, I examine the role of environmental variability on fish recruitment, and ill particular how turbulence affects feeding and growth of larval fish.......g. larval diet composition, feeding behaviour, growth rates, prey patchiness) respond to turbulence, and unavoidable sampling artifacts are mainly responsible for this result. Upwelling as well as frontal processes appear important for larval fish growth and survival, and turbulence levels vary both within...

  10. Development of a marine fish model for studying in vivo molecular responses in ecotoxicology

    International Nuclear Information System (INIS)

    Kong, R.Y.C.; Giesy, J.P.; Wu, R.S.S.; Chen, E.X.H.; Chiang, M.W.L.; Lim, P.L.; Yuen, B.B.H.; Yip, B.W.P.; Mok, H.O.L.; Au, D.W.T.

    2008-01-01

    A protocol for fixation and processing of whole adult marine medaka (Oryzias melastigma) was developed in parallel with in situ hybridization (ISH) and immunohistochemistry (IHC) for molecular analysis of in vivo gene and protein responses in fish. Over 200 serial sagittal sections (5 μm) can be produced from a single adult medaka to facilitate simultaneous localization and quantification of gene-specific mRNAs and proteins in different tissues and subcellular compartments of a single fish. Stereological analysis (as measured by volume density, V v ) was used to quantify ISH and IHC signals on tissue sections. Using the telomerase reverse transcriptase (omTERT) gene, omTERT and proliferating cell nuclear antigen (PCNA) proteins as examples, we demonstrated that it is possible to localize, quantify and correlate their tissue expression profiles in a whole fish system. Using chronic hypoxia (1.8 ± 0.2 mg O 2 L -1 for 3 months) as an environmental stressor, we were able to identify significant alterations in levels of omTERT mRNA, omTERT protein, PCNA (cell proliferation marker) and TUNEL (apoptosis) in livers of hypoxic O. melastigma (p < 0.05). Overall, the results suggest that O. melastigma can serve as a model marine fish for assessing multiple in vivo molecular responses to stresses in the marine environment

  11. Evaluation of intratumoral HER-2 heterogeneity by fluorescence in situ hybridization in invasive breast cancer: a single institution study.

    Science.gov (United States)

    Lee, Sarah; Jung, Woohee; Hong, Soon-Won; Koo, Ja Seung

    2011-08-01

    This study aimed to determine the incidence and characteristics of HER-2 gene heterogeneity in invasive breast cancer in a single institution. Included were 971 cases of primary invasive breast cancer diagnosed between 2008 and 2010. Fluorescence in situ hybridization (FISH) image files were retrospectively reviewed and HER-2 gene heterogeneity was defined as more than 5% but less than 50% of analyzed invasive tumor cells with a HER-2/Chr17 ratio higher than 2.2, according to the College of American Pathologists guidelines. HER-2 gene heterogeneity was identified in 24 (2.5%) cases. The mean proportion of invasive tumor cells with a HER-2/chromosome 17 ratio higher than 2.2 was 11.6% (range: 5%-25%). Of 24 cases, HER-2 gene status was not amplified in 8, showed borderline amplification in 2, and amplification in 14. All HER-2 amplification cases were low-grade. In conclusion, HER-2 gene heterogeneity of invasive breast cancer is identified in routine FISH examination. This may affect the results of HER-2 gene amplification status in FISH studies.

  12. Dual color chromogenic in situ hybridization for determination of HER2 status in breast cancer: a large comparative study to current state of the art fluorescence in situ hybridization

    Directory of Open Access Journals (Sweden)

    Mollerup Jens

    2012-02-01

    Full Text Available Abstract Background Chromogenic in situ hybridization (CISH is fast becoming a well established technique for easy and sensitive determination of HER2 gene status in breast cancer. However, for the chromogenic method to achieve status as a safe and reliable technique, the method needs to be validated against already known and validated FISH techniques. Methods Here it is reported from a comparative study where HER2 gene status obtained by HER2 CISH pharmDx™ Kit was compared to HER2 gene status obtained by the FDA approved HER2 FISH pharmDx™ Kit and the PathVysion HER-2 DNA probe Kit. The study included 365 formalin fixed and paraffin-embedded invasive breast cancer tissue specimens collected consecutively at a US reference laboratory. Results The data obtained revealed an overall HER2 status concordance of approximately 98% for comparisons of HER2 CISH pharmDx™ Kit to both HER2 FISH pharmDx™ Kit and PathVysion HER-2 DNA Probe Kit. Conclusions The concordance between results obtained using the recently FDA approved HER2 CISH pharmDx™ Kit with previously FDA approved FISH techniques for HER2 gene status determination indicate that the HER2 CISH pharmDx™ Kit is a reliable chromogenic alternative to fluorescence-based methods.

  13. Dual color chromogenic in situ hybridization for determination of HER2 status in breast cancer: a large comparative study to current state of the art fluorescence in situ hybridization

    Science.gov (United States)

    2012-01-01

    Background Chromogenic in situ hybridization (CISH) is fast becoming a well established technique for easy and sensitive determination of HER2 gene status in breast cancer. However, for the chromogenic method to achieve status as a safe and reliable technique, the method needs to be validated against already known and validated FISH techniques. Methods Here it is reported from a comparative study where HER2 gene status obtained by HER2 CISH pharmDx™ Kit was compared to HER2 gene status obtained by the FDA approved HER2 FISH pharmDx™ Kit and the PathVysion HER-2 DNA probe Kit. The study included 365 formalin fixed and paraffin-embedded invasive breast cancer tissue specimens collected consecutively at a US reference laboratory. Results The data obtained revealed an overall HER2 status concordance of approximately 98% for comparisons of HER2 CISH pharmDx™ Kit to both HER2 FISH pharmDx™ Kit and PathVysion HER-2 DNA Probe Kit. Conclusions The concordance between results obtained using the recently FDA approved HER2 CISH pharmDx™ Kit with previously FDA approved FISH techniques for HER2 gene status determination indicate that the HER2 CISH pharmDx™ Kit is a reliable chromogenic alternative to fluorescence-based methods. PMID:22333181

  14. Phenotypic consequences of a mosaic marker chromosome identified by fluorescence in situ hybridization (FISH) as being derived from chromosome 16

    Energy Technology Data Exchange (ETDEWEB)

    Ray, J.H.; Zhou, X.; Pletcher, B.A. [Cornell Univ. Medical College, Manhasset, NY (United States)] [and others

    1994-09-01

    De novo marker chromosomes are detected in 1 in 2500 amniotic fluid samples and are associated with a 10-15% risk for phenotypic abnormality. FISH can be utilized as a research tool to identify the origins of marker chromosomes. The phenotypic consequences of a marker chromosome derived from the short arm of chromosome 16 are described. A 26-year-old woman underwent amniocentesis at 28 weeks gestation because of a prenatally diagnosed tetralogy of Fallot. Follow-up ultrasounds also showed ventriculomegaly and cleft lip and palate. 32 of 45 cells had the karyotype 47,XY,+mar; the remaining cells were 46,XY. The de novo marker chromosome was C-band positive and non-satellited and failed to stain with distamycin A/DAPI. At birth the ultrasound findings were confirmed and dysmorphic features and cryptorchidism were noted. Although a newborn blood sample contained only normal cells, mosaicism was confirmed in 2 skin biopsies. FISH using whole-chromosome painting and alpha-satellite DNA probes showed that the marker chromosome had originated from chromosome 16. As proximal 16q is distamycin A/DAPI positive, the marker is apparently derived from proximal 16p. At 15 months of age, this child is hypotonic, globally delayed and is gavage-fed. His physical examination is significant for microbrachycephaly, a round face, sparse scalp hair, ocular hypertelorism, exotropia, a flat, wide nasal bridge and tip, mild micrognathia, and tapered fingers with lymphedema of hands and feet. Inguinal hernias have been repaired. His features are consistent with those described for patients trisomic for most or all of the short arm of chromosome 16. Marker chromosomes derived from the short arm of chromosome 16 appear to have phenotypic consequences. As the origin of more marker chromosomes are identified using FISH, their karyotype/phenotype correlations will become more apparent, which will permit more accurate genetic counseling.

  15. Genetic identification of F1 and post-F1 serrasalmid juvenile hybrids in Brazilian aquaculture.

    Directory of Open Access Journals (Sweden)

    Diogo Teruo Hashimoto

    Full Text Available Juvenile fish trade monitoring is an important task on Brazilian fish farms. However, the identification of juvenile fish through morphological analysis is not feasible, particularly between interspecific hybrids and pure species individuals, making the monitoring of these individuals difficult. Hybrids can be erroneously identified as pure species in breeding facilities, which might reduce production on farms and negatively affect native populations due to escapes or stocking practices. In the present study, we used a multi-approach analysis (molecular and cytogenetic markers to identify juveniles of three serrasalmid species (Colossoma macropomum, Piaractus mesopotamicus and Piaractus brachypomus and their hybrids in different stocks purchased from three seed producers in Brazil. The main findings of this study were the detection of intergenus backcrossing between the hybrid ♀ patinga (P. mesopotamicus×P. brachypomus×♂ C. macropomum and the occurrence of one hybrid triploid individual. This atypical specimen might result from automixis, a mechanism that produces unreduced gametes in some organisms. Moreover, molecular identification indicated that hybrid individuals are traded as pure species or other types of interspecific hybrids, particularly post-F1 individuals. These results show that serrasalmid fish genomes exhibit high genetic heterogeneity, and multi-approach methods and regulators could improve the surveillance of the production and trade of fish species and their hybrids, thereby facilitating the sustainable development of fish farming.

  16. Study of Fish Response Using Particle Image Velocimetry and High-Speed, High-Resolution Imaging

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Zhiqun; Richmond, Marshall C.; Guensch, Gregory R.; Mueller, Robert P.

    2004-10-23

    Existing literature of previous particle image velocimetry (PIV) studies of fish swimming has been reviewed. Historically, most of the studies focused on the performance evaluation of freely swimming fish. Technological advances over the last decade, especially the development of digital particle image velocimetry (DPIV) technique, make possible more accurate, quantitative descriptions of the flow patterns adjacent to the fish and in the wake behind the fins and tail, which are imperative to decode the mechanisms of drag reduction and propulsive efficiency. For flows generated by different organisms, the related scales and flow regimes vary significantly. For small Reynolds numbers, viscosity dominates; for very high Reynolds numbers, inertia dominates, and three-dimensional complexity occurs. The majority of previous investigations dealt with the lower end of Reynolds number range. The fish of our interest, such as rainbow trout and spring and fall chinook salmon, fall into the middle range, in which neither viscosity nor inertia is negligible, and three-dimensionality has yet to dominate. Feasibility tests have proven the applicability of PIV to flows around fish. These tests have shown unsteady vortex shedding in the wake, high vorticity region and high stress region, with the highest in the pectoral area. This evident supports the observations by Nietzel et al. (2000) and Deng et al. (2004) that the operculum are most vulnerable to damage from the turbulent shear flow, because they are easily pried open, and the large vorticity and shear stress can lift and tear off scales, rupture or dislodge eyes, and damage gills. In addition, the unsteady behavior of the vortex shedding in the wake implies that injury to fish by the instantaneous flow structures would likely be much higher than the injury level estimated using the average values of the dynamics parameters. Based on existing literature, our technological capability, and relevance and practicability to

  17. Study on hybrid heat source overlap welding of magnesium alloy AZ31B

    International Nuclear Information System (INIS)

    Liang, G.L.; Zhou, G.; Yuan, S.Q.

    2009-01-01

    The magnesium alloy AZ31B was overlap welded by hybrid welding (laser-tungsten inert gas arc). According to the hybrid welding interaction principle, a new heat source model, hybrid welding heat source model, was developed with finite element analysis. At the same time, using a high-temperature metallographical microscope, the macro-appearance and microstructure characteristics of the joint after hybrid overlap welding were studied. The results indicate that the hybrid welding was superior to the single tungsten inert gas welding or laser welding on the aspects of improving the utilized efficiency of the arc and enhancing the absorptivity of materials to laser energy. Due to the energy characteristics of hybrid overlap welding the macro-appearance of the joint was cup-shaped, the top weld showed the hybrid welding microstructure, while, the lower weld showed the typical laser welding microstructure

  18. Study on hybrid heat source overlap welding of magnesium alloy AZ31B

    Energy Technology Data Exchange (ETDEWEB)

    Liang, G.L. [Department of Electromechanical Engineering, Tangshan College, Tangshan 063000 (China)], E-mail: guoliliang@sohu.com; Zhou, G. [School of Material Science and Engineering, Harbin Institute of Technology, Harbin 150001 (China); Yuan, S.Q. [Department of Electromechanical Engineering, Tangshan College, Tangshan 063000 (China)

    2009-01-15

    The magnesium alloy AZ31B was overlap welded by hybrid welding (laser-tungsten inert gas arc). According to the hybrid welding interaction principle, a new heat source model, hybrid welding heat source model, was developed with finite element analysis. At the same time, using a high-temperature metallographical microscope, the macro-appearance and microstructure characteristics of the joint after hybrid overlap welding were studied. The results indicate that the hybrid welding was superior to the single tungsten inert gas welding or laser welding on the aspects of improving the utilized efficiency of the arc and enhancing the absorptivity of materials to laser energy. Due to the energy characteristics of hybrid overlap welding the macro-appearance of the joint was cup-shaped, the top weld showed the hybrid welding microstructure, while, the lower weld showed the typical laser welding microstructure.

  19. Study on polychlorobiphenyl serum levels in French consumers of freshwater fish

    International Nuclear Information System (INIS)

    Desvignes, Virginie; Volatier, Jean-Luc; Bels, Frédéric de; Zeghnoun, Abdelkrim; Favrot, Marie-Christine; Marchand, Philippe; Le Bizec, Bruno; Rivière, Gilles; Leblanc, Jean-Charles; Merlo, Mathilde

    2015-01-01

    Introduction: Polychlorobiphenyls (PCBs) are persistent pollutants that are widespread in the environment and in foodstuffs, particularly in freshwater fish, which frequently exceed the maximum levels set by European regulations. Objectives: First, we describe the consumption of freshwater fish and serum PCB levels in French anglers, a population expected to have the highest level of dietary PCB exposure. Second, we investigated whether there is a statistical relationship between serum PCB levels and the angler consumption of freshwater fish with high PCB bioaccumulation potential (PCB-BP + freshwater fish) in order to make recommendations with regard to safe consumption of freshwater fish. Methods: We conducted a survey of anglers from six sites with contrasting PCB contamination levels. The survey included a food consumption frequency questionnaire and blood samples were taken to assess serum PCB levels. We used a regression model to determine the main factors contributing to serum PCB levels. Results: Consumption of PCB-BP + freshwater fish was relatively infrequent. Serum PCB levels of the study population and of women of childbearing age were in the same range as those observed in the French population and in neighbouring European countries, but higher than in the North American population. The two factors with the highest positive association with serum PCB levels were age (R 2 = 61%) and the consumption of PCB-BP + freshwater fish (R 2 = 2%). Using the regression model, we calculated, for several scenarios depending on the age and gender of the population, the maximum annual frequencies for PCB-BP + freshwater fish consumption that do not exceed the critical body burden threshold. Conclusion: Following the results of this study, the French agency for food, environmental and occupational health and safety (ANSES) issued an opinion and recommended some specific maximum freshwater fish consumption frequencies to protect the French general population

  20. Study on polychlorobiphenyl serum levels in French consumers of freshwater fish

    Energy Technology Data Exchange (ETDEWEB)

    Desvignes, Virginie, E-mail: virginie.desvignes@anses.fr [Risk Assessment Department, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27–31, avenue du Général Leclerc, Maisons-Alfort, F-94701 (France); Volatier, Jean-Luc [Risk Assessment Department, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27–31, avenue du Général Leclerc, Maisons-Alfort, F-94701 (France); Bels, Frédéric de [Division for Public Health and Care, French National Cancer Institute (INCa), 52, avenue André Morizet, Boulogne Billancourt Cedex, F-92513 (France); Zeghnoun, Abdelkrim [Department of Environmental Health, French Institute for Public Health Surveillance (InVS), 12, rue du Val d' Osne, Saint-Maurice, F-94415 (France); Favrot, Marie-Christine [Ministry of Health, 14, avenue Duquesne, Paris, F-75350 (France); Marchand, Philippe; Le Bizec, Bruno [LUNAM Université, Oniris, Laboratoire d' Etude des Résidus et Contaminants dans les Aliments (LABERCA), USC INRA 1329, Nantes, F-44307 (France); Rivière, Gilles; Leblanc, Jean-Charles; Merlo, Mathilde [Risk Assessment Department, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27–31, avenue du Général Leclerc, Maisons-Alfort, F-94701 (France)

    2015-02-01

    Introduction: Polychlorobiphenyls (PCBs) are persistent pollutants that are widespread in the environment and in foodstuffs, particularly in freshwater fish, which frequently exceed the maximum levels set by European regulations. Objectives: First, we describe the consumption of freshwater fish and serum PCB levels in French anglers, a population expected to have the highest level of dietary PCB exposure. Second, we investigated whether there is a statistical relationship between serum PCB levels and the angler consumption of freshwater fish with high PCB bioaccumulation potential (PCB-BP{sup +} freshwater fish) in order to make recommendations with regard to safe consumption of freshwater fish. Methods: We conducted a survey of anglers from six sites with contrasting PCB contamination levels. The survey included a food consumption frequency questionnaire and blood samples were taken to assess serum PCB levels. We used a regression model to determine the main factors contributing to serum PCB levels. Results: Consumption of PCB-BP{sup +} freshwater fish was relatively infrequent. Serum PCB levels of the study population and of women of childbearing age were in the same range as those observed in the French population and in neighbouring European countries, but higher than in the North American population. The two factors with the highest positive association with serum PCB levels were age (R{sup 2} = 61%) and the consumption of PCB-BP{sup +} freshwater fish (R{sup 2} = 2%). Using the regression model, we calculated, for several scenarios depending on the age and gender of the population, the maximum annual frequencies for PCB-BP{sup +} freshwater fish consumption that do not exceed the critical body burden threshold. Conclusion: Following the results of this study, the French agency for food, environmental and occupational health and safety (ANSES) issued an opinion and recommended some specific maximum freshwater fish consumption frequencies to protect the French

  1. Robotic Fish to Aid Animal Behavior Studies and Informal Science Learning

    Science.gov (United States)

    Phamduy, Paul

    The application of robotic fish in the fields of animal behavior and informal science learning are new and relatively untapped. In the context of animal behavior studies, robotic fish offers a consistent and customizable stimulus that could contribute to dissect the determinants of social behavior. In the realm of informal science learning, robotic fish are gaining momentum for the possibility of educating the general public simultaneously on fish physiology and underwater robotics. In this dissertation, the design and development of a number of robotic fish platforms and prototypes and their application in animal behavioral studies and informal science learning settings are presented. Robotic platforms for animal behavioral studies focused on the utilization replica or same scale prototypes. A novel robotic fish platform, featuring a three-dimensional swimming multi-linked robotic fish, was developed with three control modes varying in the level of robot autonomy offered. This platform was deployed at numerous science festivals and science centers, to obtain data on visitor engagement and experience.

  2. Bioindicator and fish health studies around the Terra Nova oil development site on the Grand Banks

    Energy Technology Data Exchange (ETDEWEB)

    Mathieu, A.; Hanlon, J.; Melvin, W.; French, B. [Oceans Ltd., St. John' s, NL (Canada); DeBlois, E. [Elisabeth DeBlois Inc., St. John' s, NL (Canada); Williams, U.; Wight, F.; Janes, G. [Petro-Canada, St. John' s, NL (Canada)

    2009-07-01

    Bioindicators or health effect indicators can be a valuable reconnaissance tool for addressing concerns on the part of the fishing industry and public interests regarding any potential impacts of pollutants on fish stocks. American plaice (Hippoglossoides platessoides) was initially chosen by the oil industry as an indicator species for Environmental Effects Monitoring (EEM) programs in the Grand Banks of Newfoundland because it is an important commercial flatfish. This presentation reported on fish health studies carried out at the Terra Nova development site before and after release of produced waters, which began in 2003. These studies represented 1 component of the overall Terra Nova EEM program. Fish were collected near the development area and in a reference area 20 km away. A broad range of health effect indicators were studied, including fish condition, visible skin and organ lesions, levels of mixed-function oxygenase (MFO) enzymes, haematology and an array of 19 histopathological indices in liver and gills. These indicators have been widely used in laboratory and field investigations with various fish species. A slight elevation of MFO enzyme activity was observed in fish from the development area in 2002, before release of produced water. In 2006, other indices were similar between the development and reference area. It was concluded that the overall results do not indicate any project effects.

  3. Fish Rhabdoviruses

    Science.gov (United States)

    Kurath, G.; Winton, J.

    2008-01-01

    Many important viral pathogens of fish are members of the family Rhabdoviridae. The viruses in this large group cause significant losses in populations of wild fish as well as among fish reared in aquaculture. Fish rhabdoviruses often have a wide host and geographic range, and infect aquatic animals in both freshwater and seawater. The fish rhabdoviruses comprise a diverse collection of isolates that can be placed in one of two quite different groups: isolates that are members of the established genusNovirhabdovirus, and those that are most similar to members of the genus Vesiculovirus. Because the diseases caused by fish rhabdoviruses are important to aquaculture, diagnostic methods for their detection and identification are well established. In addition to regulations designed to reduce the spread of fish viruses, a significant body of research has addressed methods for the control or prevention of diseases caused by fish rhabdoviruses, including vaccination. The number of reported fish rhabdoviruses continues to grow as a result of the expansion of aquaculture, the increase in global trade, the development of improved diagnostic methods, and heightened surveillance activities. Fish rhabdoviruses serve as useful components of model systems to study vertebrate virus disease, epidemiology, and immunology.

  4. Analysis of consumer behavior in decision making of purchasing ornamental freshwater fish (case of study at ornamental freshwater fish market at Peta Street, Bandung)

    Science.gov (United States)

    Gumilar, I.; Rizal, A.; Sriati; Setiawan Putra, R.

    2018-04-01

    This research aim was to analyzed process of decision making of purchasing ornamental freshwater fish at Peta Street, Bandung City and Analyzed what factors are driving consumers to buy freshwater fish Peta Street. The method used in this research is case study with rating scale and rank spearman analysis. The sampling technique is the accidental random sampling method consist of 30 respondents. The consumer’s decision making process consist of five stages, namely the recognition of needs, information searching, alternative evaluation, process of purchasing, and the evaluation of results. The results showed that at the stage of recognition of needs the motivation of purchasing freshwater fish because respondents are very fond of ornamental freshwater fish, at the stage of information search, the information sources are from the print media and friends or neighborhood. At the stage of alternative evaluation, the reason consumers buy ornamental freshwater fish because the quality of good products. The stage of purchasing decision process consumers bought 1-5 fish with frequency of purchase 1 time per month. The evaluation of results of post-purchasing consumers feel very satisfied with the fish products and the price is very affordable. To observe the factors that influence purchasing motivation of consumers, spearman rank test is the method. The results showed that the quality and price of the product are the factors that most influence the purchase decision of ornamental freshwater fish with the range of student-t value 3,968 and 2,107.

  5. Fabrication and study of hybrid molecule/superconductor assemblies

    International Nuclear Information System (INIS)

    McDevitt, J.T.; Haupt, S.G.; Jurbergs, D.; Riley, D.R.; Zhao, J.; Zhou, J.P.; Lo, K.; Grassi, J.; Jones, C.

    1994-01-01

    The fabrication of electronic devices from molecular materials has attracted much attention recently. Schottky diodes, molecular transistors, metal-insulator-semiconductor diodes, MIS field effect transistors and light emitting diodes have all been prepared utilizing such substances. The active elements in these devices have been constructed by depositing the molecular phase onto the surface of a metal, semiconductor or insulating substrate. With the recent discovery of high temperature superconductivity, new opportunities now exist for the study of molecule/superconductor interactions as well as for the construction of novel hybrid molecule/superconductor devices. In this paper, methods for preparing the first two classes of composite molecule/superconductor devices are reported. Consequently, light sensors based on organic dye-coated superconductor junctions as well as molecular switches fashioned from organic conductive polymer-coated superconductor microbridges are discussed. Moreover, the initial results related to the study of molecule/superconductor energy and electron transfer phenomena are reported

  6. Consumer Acceptance of Eco-Labeled Fish: A Mexican Case Study

    Directory of Open Access Journals (Sweden)

    Mónica Pérez-Ramírez

    2015-04-01

    Full Text Available Fish eco-labeling is a market-based incentive program for sustainable fisheries. This paper examines consumers’ acceptance of eco-labeled fish by using data from a pilot study conducted in a coastal area of northwestern Mexico. An ordered probit model was applied, using 364 observations. The results show that most respondents favor the idea of eco-labeled fish as a sustainable option and know that this is a costlier option. Income level, consumers’ occupation and frequency of fish consumption are factors taken into account in the buying decision. Price was not a statistically significant factor affecting purchase decision. The study suggests that employed consumers with knowledge of labels may prioritize their demand for eco-labeled fish. Thus, providing a clear definition of sustainability that increases consumer awareness might be a promising strategy in developing the market for eco-labeled fish. The results and their implications could be employed as an element for future development of consumer policies related to fish sustainability.

  7. Study of fish response using particle image velocimetry and high-speed, high-resolution imaging

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Z. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Richmond, M. C. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mueller, R. P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Gruensch, G. R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2004-10-01

    Fish swimming has fascinated both engineers and fish biologists for decades. Digital particle image velocimetry (DPIV) and high-speed, high-resolution digital imaging are recently developed analysis tools that can help engineers and biologists better understand how fish respond to turbulent environments. This report details studies to evaluate DPIV. The studies included a review of existing literature on DPIV, preliminary studies to test the feasibility of using DPIV conducted at our Flow Biology Laboratory in Richland, Washington September through December 2003, and applications of high-speed, high-resolution digital imaging with advanced motion analysis to investigations of fish injury mechanisms in turbulent shear flows and bead trajectories in laboratory physical models. Several conclusions were drawn based on these studies, which are summarized as recommendations for proposed research at the end of this report.

  8. Fish as bioindicators in aquatic environmental pollution assessment: A case study in Lake Victoria wetlands, Uganda

    Science.gov (United States)

    Naigaga, I.; Kaiser, H.; Muller, W. J.; Ojok, L.; Mbabazi, D.; Magezi, G.; Muhumuza, E.

    Growing human population and industrialization have led to the pollution of most aquatic ecosystems and consequent deterioration in environmental water quality. Indicator organisms are needed to improve assessment programmes on the ecological impacts of anthropogenic activities on the aquatic environment. Fish have been widely documented as useful indicators of environmental water quality because of their differential sensitivity to pollution. This study investigated the environmental water quality of selected wetland ecosystems using fish as biological indicators. Fish community structure in relation to water quality was assessed in five wetlands along the shoreline of Lake Victoria from August 2006 to June 2008. Four urban wetlands were variedly impacted by anthropogenic activities while one rural wetland was less impacted, and served as a reference site. Fish species diversity, abundance and richness were assessed, and canonical correspondence analysis (CCA) was used to evaluate the relationship between the fish communities and environmental variables. Results revealed that urban effluent impacted negatively on water quality and consequently the fish community structure. A total of 29 fish species were recorded throughout the study with the lowest number of 15 species recorded in the most impacted site. Shannon diversity and Margalef species richness indices were highest at the references site and lowest at the most impacted site. Wetland haplochromis species dominated the reference site, while oreochromis species dominated the most impacted site. The inshore locations registered higher species diversity and low species richness than the offshore locations. Low dissolved oxygen, pH, secchi depth and high electrical conductivity, total phosphorous, and total nitrogen were strongly associated with the effluent-impacted sites and greatly influenced the fish community structure. This study recommends the use of fish as valuable biological indicators in aquatic

  9. Fish intake, cooking practices, and risk of prostate cancer: results from a multi-ethnic case-control study.

    Science.gov (United States)

    Joshi, Amit D; John, Esther M; Koo, Jocelyn; Ingles, Sue A; Stern, Mariana C

    2012-03-01

    Studies conducted to assess the association between fish consumption and prostate cancer (PCA) risk are inconclusive. However, few studies have distinguished between fatty and lean fish, and no studies have considered the role of different cooking practices, which may lead to differential accumulation of chemical carcinogens. In this study, we investigated the association between fish intake and localized and advanced PCA taking into account fish types (lean vs. fatty) and cooking practices. We analyzed data for 1,096 controls, 717 localized and 1,140 advanced cases from the California Collaborative Prostate Cancer Study, a multiethnic, population-based case-control study. We used multivariate conditional logistic regression to estimate odds ratios using nutrient density converted variables of fried fish, tuna, dark fish and white fish consumption. We tested for effect modification by cooking methods (high- vs. low-temperature methods) and levels of doneness. We observed that high white fish intake was associated with increased risk of advanced PCA among men who cooked with high-temperature methods (pan-frying, oven-broiling and grilling) until fish was well done (p (trend) = 0.001). No associations were found among men who cooked fish at low temperature and/or just until done (white fish x cooking method p (interaction) = 0.040). Our results indicate that consideration of fish type (oily vs. lean), specific fish cooking practices and levels of doneness of cooked fish helps elucidate the association between fish intake and PCA risk and suggest that avoiding high-temperature cooking methods for white fish may lower PCA risk.

  10. Isolation and characterization of 5S rDNA sequences in catfishes genome (Heptapteridae and Pseudopimelodidae): perspectives for rDNA studies in fish by C0t method.

    Science.gov (United States)

    Gouveia, Juceli Gonzalez; Wolf, Ivan Rodrigo; de Moraes-Manécolo, Vivian Patrícia Oliveira; Bardella, Vanessa Belline; Ferracin, Lara Munique; Giuliano-Caetano, Lucia; da Rosa, Renata; Dias, Ana Lúcia

    2016-12-01

    Sequences of 5S ribosomal RNA (rRNA) are extensively used in fish cytogenomic studies, once they have a flexible organization at the chromosomal level, showing inter- and intra-specific variation in number and position in karyotypes. Sequences from the genome of Imparfinis schubarti (Heptapteridae) were isolated, aiming to understand the organization of 5S rDNA families in the fish genome. The isolation of 5S rDNA from the genome of I. schubarti was carried out by reassociation kinetics (C 0 t) and PCR amplification. The obtained sequences were cloned for the construction of a micro-library. The obtained clones were sequenced and hybridized in I. schubarti and Microglanis cottoides (Pseudopimelodidae) for chromosome mapping. An analysis of the sequence alignments with other fish groups was accomplished. Both methods were effective when using 5S rDNA for hybridization in I. schubarti genome. However, the C 0 t method enabled the use of a complete 5S rRNA gene, which was also successful in the hybridization of M. cottoides. Nevertheless, this gene was obtained only partially by PCR. The hybridization results and sequence analyses showed that intact 5S regions are more appropriate for the probe operation, due to conserved structure and motifs. This study contributes to a better understanding of the organization of multigene families in catfish's genomes.

  11. High-throughput telomere length quantification by FISH and its application to human population studies.

    Science.gov (United States)

    Canela, Andrés; Vera, Elsa; Klatt, Peter; Blasco, María A

    2007-03-27

    A major limitation of studies of the relevance of telomere length to cancer and age-related diseases in human populations and to the development of telomere-based therapies has been the lack of suitable high-throughput (HT) assays to measure telomere length. We have developed an automated HT quantitative telomere FISH platform, HT quantitative FISH (Q-FISH), which allows the quantification of telomere length as well as percentage of short telomeres in large human sample sets. We show here that this technique provides the accuracy and sensitivity to uncover associations between telomere length and human disease.

  12. Hybrid vehicle system studies and optimized hydrogen engine design

    Science.gov (United States)

    Smith, J. R.; Aceves, S.

    1995-04-01

    We have done system studies of series hydrogen hybrid automobiles that approach the PNGV design goal of 34 km/liter (80 mpg), for 384 km (240 mi) and 608 km (380 mi) ranges. Our results indicate that such a vehicle appears feasible using an optimized hydrogen engine. We have evaluated the impact of various on-board storage options on fuel economy. Experiments in an available engine at the Sandia CRF demonstrated NO(x) emissions of 10 to 20 ppM at an equivalence ratio of 0.4, rising to about 500 ppm at 0.5 equivalence ratio using neat hydrogen. Hybrid simulation studies indicate that exhaust NO(x) concentrations must be less than 180 ppM to meet the 0.2 g/mile ULEV or Federal Tier II emissions regulations. LLNL has designed and fabricated a first generation optimized hydrogen engine head for use on an existing Onan engine. This head features 15:1 compression ratio, dual ignition, water cooling, two valves and open quiescent combustion chamber to minimize heat transfer losses. Initial testing shows promise of achieving an indicated efficiency of nearly 50% and emissions of less than 100 ppM NO(x). Hydrocarbons and CO are to be measured, but are expected to be very low since their only source is engine lubricating oil. A successful friction reduction program on the Onan engine should result in a brake thermal efficiency of about 42% compared to today's gasoline engines of 32%. Based on system studies requirements, the next generation engine will be about 2 liter displacement and is projected to achieve 46% brake thermal efficiency with outputs of 15 kW for cruise and 40 kW for hill climb.

  13. Plastic ingestion by fish in the Southern Hemisphere: A baseline study and review of methods.

    Science.gov (United States)

    Cannon, Seon M E; Lavers, Jennifer L; Figueiredo, Bianca

    2016-06-15

    Plastic ingestion is well documented among marine birds and sea turtles but fewer studies have investigated ingestion in fish, particularly in the Southern Hemisphere. We investigated the frequency of plastic ingestion in 21 species of fish and one species of cephalopod. The overall occurrence of plastic ingestion was 0.3%. Two micro-plastic items were recovered from the gastrointestinal tract of a single Antarctic toothfish (Dissostichus mawsoni). Ingestion rates were similar to other studies of fish conducted in both the Northern and Southern Hemispheres, however comparisons across species and locations are challenging due to the lack of consistency in the identification and classification of plastic debris. In response, we propose a standardised sampling protocol based on the available literature to provide a stronger basis for comparisons among existing and future studies of plastic ingestion in fish. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Detection of {open_quotes}cryptic{close_quotes}karyotypic rearrangements in closely related primate species by fluorescence in situ hybridization (FISH) using human subtelomeric DNA probes

    Energy Technology Data Exchange (ETDEWEB)

    Youngblom, J.J. [California State University-Stanislaus, Turlock, CA (United States); Trask, B.J.; Friedman, C. [Univ. of Washington, Seattle, WA (United States)] [and others

    1994-09-01

    Specific human subtelomeric DNA probes were used to reveal cryptic chromosomal rearrangements that cannot be detected by conventional high resolution cytogenetic techniques, or by chromosomal in situ suppression hybridization using whole chromosome paint analysis. Two cosmids containing different subtelomeric DNA sequences were derived from human chromosome 19 and designated as 7501 and 16432. Cosmid 7501 was hybridized to chromosomes from humans, chimpanzee, gorilla and orangutan. In humans, 7501 consistently labeled chromosomes 3q, 15q, and 19p. Additional chromosomes were labeled in different individuals, indicating a polymorphic distribution of this sequence in the human genome. In contrast, 7501 consistently and strongly labeled only the q arm terminus of chromosome 3 in both chimp and gorilla. The identification of the chromosome was made by two-color FISH analysis using human chromosome 4-specific paint and homologous to human chromosome 4. None of the human subjects showed labeling of chromosome 4 with 7501. This finding suggests that in the course of human evolution, subsequent to the divergence of humans and African apes, a cryptic translocation occurred between the ancestral human chromosome 4 and one or more of the other human chromosomes that now contain this DNA segment. In orangutan, 7501 labeled a single acrocentric chromosome pair, a distinctly different chromosome than that labeled in chimp and gorilla. Comparison of chromosome sites labeled with cosmid 16432 showed the distribution of signals on chromosome 1q arm is the same for humans and chimp, but different in the gorilla. Humans and chimps show distinct labeling on sites 1q terminus and 1q41-42. In gorilla, there is instead a large cluster of intense signal near the terminus of 1q that clearly does not extend all the way to the terminus. A paracentric inversion or an unequal cross-over event may account for the observed difference between these species.

  15. Studies on food organisms of pelagic fishes as revealed by the 1979 North Atlantic Eel Expedition

    Science.gov (United States)

    Appelbaum, S.

    1982-09-01

    The extent to which pelagic fishes occurring in the Sargasso Sea and adjacent parts of the Atlantic prey on leptocephali (Anguilliformes) was investigated. Most of the fishes examined (c. 95%) were collected using a commercial pelagical trawl. The stomach contents of about 1000 fishes (25 species of 10 families), mostly belonging to the suborders Myctophoidei, Stomiatoidei and the order Anguilliformes, were examined. The remains of invertebrates, mainly crustaceans, molluscs, tunicates, chaetognaths, and siphonophores were found in 28.8 % of the stomachs. Fishes, mostly myctophids or fish remains, were observed in 11.2 % of the stomachs; 18.7 % contained unidentified items and 40.6 % were empty. Leptocephali ( Ariosoma spp. and Gnathophis sp.) were found in the alimentary tract of 0.5 % of the fishes examined, exclusively represented by the myctophid, Ceratoscopelus warmingii. This report indicates that the Sargasso Sea population of Anguilla leptocephali, economically the most important eel, is not seriously affected by predation of oceanic fish species considered in this study.

  16. Blanket design study for a Commercial Tokamak Hybrid Reactor (CTHR)

    International Nuclear Information System (INIS)

    Chapin, D.L.; Green, L.; Lee, A.Y.; Culbert, M.E.; Kelly, J.L.

    1979-09-01

    The results are presented of a study on two blanket design concepts for application in a Commercial Tokamak Hybrid Reactor (CTHR). Both blankets operate on the U-Pu cycle and are designed to achieve tritium self-sufficiency while maximizing the fissile fuel production within thermal and mechanical design constraints. The two blanket concepts that were evaluated were: (1) a UC fueled, stainless steel clad and structure, helium cooled blanket; and (2) a UO 2 fueled, zircaloy clad, stainless steel structure, boiling water cooled blanket. Two different tritium breeding media, Li 2 O and LiH, were evaluated for use in both blanket concepts. The use of lead as a neutron multiplier or reflector and graphite as a reflector was also considered for both blankets

  17. Heavy Duty Diesel Truck and Bus Hybrid Powertrain Study

    Science.gov (United States)

    2012-03-01

    Electric Vehicles to supply battery modules for Smith’s lineup of zero-emission, all-electric commercial vehicles (CVs). A123 expects to begin...hybrids may have generally improved reliability compared to conventional diesel vehicles, their maintenance procedures are specialized. Hybrid

  18. Experimental study on a hybrid photovoltaic/heat pump system

    International Nuclear Information System (INIS)

    Chen Hongbing; Riffat, Saffa B.; Fu Yu

    2011-01-01

    Several studies have found that the decrease of photovoltaic (PV) cell temperature would increase the solar-to-electricity conversion efficiency. Different working fluids such as air and water have been used for the cooling of PV modules, but the improvement in energy performance has been found to be small. In this paper, R134a refrigerant was employed to cool the PV modules. With its low evaporating temperature, it was expected to achieve better cooling effect and electrical performance of the PV modules than using air and water working fluids. An experimental rig of a hybrid micro PV panel-based heat pump system was constructed for the performance testing in a laboratory at University of Nottingham. A small PV panel was made of 6 glass vacuum tube - PV module - aluminium sheet - cooper tube (GPAC) sandwiches connected in series, acting as the evaporator. This was coupled with a small heat pump system. The glass vacuum tubes reduced the heat loss from the PV panel to the ambient, resulting in the improvement of thermal performance. Three testing modes were proposed to investigate the effect of solar radiation, condenser water flow rate and condenser water supply temperature on energy performance. The testing results showed that an averaged COP reached 3.8, 4.3 and 4.0 under the three testing modes with variable radiation, condenser water supply water temperature and water flow rate, respectively, but this could be much higher for a large capacity heat pump system using large PV panels on building roofs. The COP increased with the increasing solar radiation, but decreased with the increasing condenser water supply temperature and water flow rate. The electrical efficiency of PV panel was improved by up to 1.9% based on a reference PV efficiency of 3.9%, compared with that without cooling. The condenser water supply temperature and water flow rate had little effect on the electrical performance. - Highlights: → R134a refrigerant was used for cooling of PV modules

  19. Fish consumption and the risk of colorectal cancer: the Ohsaki Cohort Study.

    Science.gov (United States)

    Sugawara, Y; Kuriyama, S; Kakizaki, M; Nagai, M; Ohmori-Matsuda, K; Sone, T; Hozawa, A; Nishino, Y; Tsuji, I

    2009-09-01

    Evidence from laboratory and animal studies suggests that high fish consumption may reduce the risk of colorectal cancer, but the results of studies in humans have been inconsistent. The objective of this study was to prospectively examine the association between fish consumption and the risk of colorectal cancer incidence in Japan, where fish is widely consumed. We analysed data from 39 498 men and women registered in the Ohsaki National Health Insurance Cohort Study who were 40-79 years old and free of cancer at the baseline. Fish consumption was assessed at the baseline using a self-administered food frequency questionnaire. During 9 years of follow-up, we identified 566 incident cases of colorectal cancer (379 men and 187 women). The hazard ratios and 95% confidence intervals (CIs) for colorectal cancer incidence in the highest quartile of fish consumption compared with the lowest quartile were 1.07 (95% CIs; 0.78-1.46, P-trend=0.43) for men, and 0.96 (95% CIs; 0.61-1.53, P-trend=0.69) for women. The results of this prospective cohort study revealed no association between fish consumption and the risk of colorectal cancer.

  20. Fatty acid composition of freshwater wild fish in subalpine lakes: a comparative study.

    Science.gov (United States)

    Vasconi, Mauro; Caprino, Fabio; Bellagamba, Federica; Busetto, Maria Letizia; Bernardi, Cristian; Puzzi, Cesare; Moretti, Vittorio Maria

    2015-03-01

    In this study, the proximate and fatty acid compositions of the muscle tissue of 186 samples of fish belonging to fifteen species of freshwater fish harvested in subalpine lakes (bleak, shad, crucian carp, whitefish, common carp, pike, black bullhead, burbot, perch, Italian roach, roach, rudd, wels catfish, chub and tench) were investigated. Most of the fish demonstrated a lipid content in the fillet lower than 2.0 g 100 g(-1) wet weight (range 0.6-9.7). A strong relationship between feeding behavior and fatty acid composition of the muscle lipids was observed. Planktivorous fish showed the lowest amounts of n-3 fatty acids (p fish showed the highest amounts of saturated fatty acids and n-3 fatty acids (p fish showed substantial proportions of n-3 fatty acids and the highest contents of n-6 fatty acids. Principal component analysis showed a distinct separation between fish species according to their feeding habits and demonstrated that the most contributing trophic markers were 18:1n-9, 18:3n-3, 22:6n-3 and 20:4n-6. The quantitative amounts n-3 polyunsaturated fatty acid in muscle tissues varied depending on the fish species, the lipid content and the feeding habits. Some species were very lean, and therefore would be poor choices for human consumption to meet dietary n-3 fatty acid requirements. Nevertheless, the more frequently consumed and appreciated fish, shad and whitefish, had EPA and DHA contents in the range 900-1,000 mg 100 g(-1) fresh fillet.

  1. Fish health and fish quality

    DEFF Research Database (Denmark)

    Ingerslev, Hans-Christian

    Aquaculture is an expanding worldwide industry producing an increasing amount of fish every year. The quality of the fish meat is dependent upon many biological and non-biological factors. Infectious diseases are known to cause bleedings and damage of the muscle tissue that may lead to scarring...... are poorly described in fish. The present work in this thesis focused on: 1) examination of potential changes in the quality regarding texture of the muscle tissue in rainbow trout (Oncorhynchus mykiss) after previous infection with the bacterial pathogens Yersinia ruckeri and Vibrio anguillarum; 2...... of these studies showed that previous infections by Yersinia ruckeri and Vibrio anguillarum gave rise to subsequent changes regarding textural quality parameters in fresh fish meat, while no differences were seen for cold-smoked meat from the same fish. The texture in previous infected fish was less flaky and less...

  2. Studies on water turbine runner which fish can pass through: In case of single stage axial runner

    International Nuclear Information System (INIS)

    Shimizu, Yukimari; Maeda, Takao; Nagoshi, Osamu; Ieda, Kazuma; Shinma, Hisako; Hagimoto, Michiko

    1994-01-01

    The relationship between water turbine runner design and operation and the safe passage of fish through the turbine is studied. The kinds of fish used in the tests are a dace, a sweet fish and a small salmon. A single stage axial runner is used. The velocity and pressure distributions were measured inside the turbine casing and along the casing wall. Many pictures showing fish passing through the rotating runner were taken and analyzed. The swimming speed of the fish was examined from video recordings. Fish pass through the runner more rapidly when they can determine and choose the easier path. Injury and mortality of fish are affected by the runner speed and the location of impact of the runner on the fish body

  3. Fish intake during pregnancy, fetal growth, and gestational length in 19 European birth cohort studies.

    Science.gov (United States)

    Leventakou, Vasiliki; Roumeliotaki, Theano; Martinez, David; Barros, Henrique; Brantsaeter, Anne-Lise; Casas, Maribel; Charles, Marie-Aline; Cordier, Sylvaine; Eggesbø, Merete; van Eijsden, Manon; Forastiere, Francesco; Gehring, Ulrike; Govarts, Eva; Halldórsson, Thorhallur I; Hanke, Wojciech; Haugen, Margaretha; Heppe, Denise H M; Heude, Barbara; Inskip, Hazel M; Jaddoe, Vincent W V; Jansen, Maria; Kelleher, Cecily; Meltzer, Helle Margrete; Merletti, Franco; Moltó-Puigmartí, Carolina; Mommers, Monique; Murcia, Mario; Oliveira, Andreia; Olsen, Sjúrður F; Pele, Fabienne; Polanska, Kinga; Porta, Daniela; Richiardi, Lorenzo; Robinson, Siân M; Stigum, Hein; Strøm, Marin; Sunyer, Jordi; Thijs, Carel; Viljoen, Karien; Vrijkotte, Tanja G M; Wijga, Alet H; Kogevinas, Manolis; Vrijheid, Martine; Chatzi, Leda

    2014-03-01

    Fish is a rich source of essential nutrients for fetal development, but in contrast, it is also a well-known route of exposure to environmental pollutants. We assessed whether fish intake during pregnancy is associated with fetal growth and the length of gestation in a panel of European birth cohort studies. The study sample of 151,880 mother-child pairs was derived from 19 population-based European birth cohort studies. Individual data from cohorts were pooled and harmonized. Adjusted cohort-specific effect estimates were combined by using a random- and fixed-effects meta-analysis. Women who ate fish >1 time/wk during pregnancy had lower risk of preterm birth than did women who rarely ate fish (≤ 1 time/wk); the adjusted RR of fish intake >1 but 1 but <3 times/wk and 15.2 g (95% CI: 8.9, 21.5 g) for ≥ 3 times/wk independent of gestational age. The association was greater in smokers and in overweight or obese women. Findings were consistent across cohorts. This large, international study indicates that moderate fish intake during pregnancy is associated with lower risk of preterm birth and a small but significant increase in birth weight.

  4. Exploring the relationship between convenience and fish consumption: A cross-cultural study

    OpenAIRE

    OLSEN, SO; SCHOLDERER, J; BRUNSO, K; Verbeke, Wim

    2007-01-01

    The purpose of the present study is to explore cultural differences in the meaning of convenience and the relationships between convenience, attitudes and fish consumption in five European countries. The results suggest that the meaning of meal convenience is not culture specific, whilst the absolute levels of convenience orientation and the perceived inconvenience of fish differ between cultures. Convenience orientation was highest in Poland, followed by Spain, and was lowest in the Netherla...

  5. Laboratory Studies of the Effects of Pressure and Dissolved Gas Supersaturation on Turbine-Passed Fish

    International Nuclear Information System (INIS)

    Abernethy, Cary S; Amidan, Brett G

    2001-01-01

    The objective of this study was to examine the relative importance of pressure changes as a source of turbine-passage injury and mortality. Specific tests were designed to quantify the response of fish to rapid pressure changes typical of turbine passage, with and without the complication of the fish being acclimated to gas supersaturated water. We investigated the responses of rainbow trout (Oncorhynchus mykiss), chinook salmon (O. tshawytscha), and bluegill sunfish (Lepomis macrochirus) to these two stresses, both singly and in combination

  6. Higher freshwater fish and sea fish intake is inversely associated with colorectal cancer risk among Chinese population: a case-control study

    OpenAIRE

    Xu, Ming; Fang, Yu-Jing; Chen, Yu-Ming; Lu, Min-Shan; Pan, Zhi-Zhong; Yan, Bo; Zhong, Xiao; Zhang, Cai-Xia

    2015-01-01

    The association between specific fish intake and colorectal cancer risk remains controversial. This study aimed to examine the association between specific fish intake and colorectal cancer risk in Chinese population in a large case control study. During July 2010 to November 2014, 1189 eligible colorectal cancer cases and 1189 frequency-matched controls (age and sex) completed in-person interviews. A validated food frequency questionnaire was used to estimate dietary intake. Multivariate log...

  7. Her-2 neu (Cerb-B2) expression in fine needle aspiration samples of breast carcinoma: A pilot study comparing FISH, CISH and immunocytochemistry.

    Science.gov (United States)

    Kapila, Kusum; Al-Awadhi, S; Francis, Im

    2011-04-01

    Breast cancers with Her-2 neu gene amplification are recognized as important markers for aggressive disease and targets which respond to therapy with trastuzumab. Her-2 neu testing on histological sections is routinely performed to select patients who may benefit from anti- Her-2 neu therapy. Few reports are available which document Her-2 neu status on fine needle aspirates (FNA). This pilot study is to document expression of Her-2 neu (Cerb-B2) on cytospin smears from FNA of patients with breast carcinoma. Twenty samples of FNA already collected for diagnostic purposes from patients with primary breast carcinoma were studied for demonstration of Her-2 neu expression by immunohistochemistry (IHC), Fluorescent in-situ hybridization (FISH) and chromogenic in-situ hybridization (CISH) on cytospin smears from FNA. Their expression was compared with tissue sections where possible. Good correlation was observed between Her-2 neu protein expression and gene amplification in cytospin smears. Three of five (60%) breast carcinomas cases with 2+ and 3+ staining on IHC showed gene amplification by FISH and CISH. Three of 7 (43%) and 5 of 7 (71%) cases negative/1+ staining on IHC did not show gene amplification by FISH and CISH respectively. Tissue sections from 10 cases with 2+ and 3+ staining for Her2neu by IHC showed gene amplification in 8 cases. Demonstration of Her-2 neu by IHC, FISH or CISH in FNA is possible and may play a role in the management of patients with advanced breast cancer or those cases where surgical resection is not advisable.

  8. Her-2 neu (Cerb-B2 expression in fine needle aspiration samples of breast carcinoma: A pilot study comparing FISH, CISH and immunocytochemistry

    Directory of Open Access Journals (Sweden)

    Kusum Kapila

    2011-01-01

    Full Text Available Background: Breast cancers with Her-2 neu gene amplification are recognized as important markers for aggressive disease and targets which respond to therapy with trastuzumab. Her-2 neu testing on histological sections is routinely performed to select patients who may benefit from anti- Her-2 neu therapy. Few reports are available which document Her-2 neu status on fine needle aspirates (FNA. Aim: This pilot study is to document expression of Her-2 neu (Cerb-B2 on cytospin smears from FNA of patients with breast carcinoma. Materials and Methods: Twenty samples of FNA already collected for diagnostic purposes from patients with primary breast carcinoma were studied for demonstration of Her-2 neu expression by immunohistochemistry (IHC, Fluorescent in-situ hybridization (FISH and chromogenic in-situ hybridization (CISH on cytospin smears from FNA. Their expression was compared with tissue sections where possible. Results: Good correlation was observed between Her-2 neu protein expression and gene amplification in cytospin smears. Three of five (60% breast carcinomas cases with 2+ and 3+ staining on IHC showed gene amplification by FISH and CISH. Three of 7 (43% and 5 of 7 (71% cases negative/1+ staining on IHC did not show gene amplification by FISH and CISH respectively. Tissue sections from 10 cases with 2+ and 3+ staining for Her2neu by IHC showed gene amplification in 8 cases. Conclusion: Demonstration of Her-2 neu by IHC, FISH or CISH in FNA is possible and may play a role in the management of patients with advanced breast cancer or those cases where surgical resection is not advisable.

  9. Poultry and fish intake and risk of esophageal cancer: A meta-analysis of observational studies.

    Science.gov (United States)

    Jiang, Gengxi; Li, Bailing; Liao, Xiaohong; Zhong, Chongjun

    2016-03-01

    Mixed results regarding the association between white meat (including poultry and fish) intake and the risk of esophageal cancer (EC) have been reported. We performed a meta-analysis to provide a quantitative assessment of this association. Relevant studies were identified in MEDLINE until December 31, 2012. Summary relative risks (SRRs) with 95% confidence intervals (CIs) were pooled with a random-effects model. A total of 20 articles, including 3990 cases with EC, were included in this meta-analysis. Compared to individuals with the lowest level of fish intake, individuals with the highest fish intake were found to have reduced risk of EC (SRRs = 0.69; 95% CIs: 0.57-0.85), while poultry intake was not associated with EC (SRRs = 0.83; 95% CIs: 0.62-1.12). Total fish consumption is associated with reduced esophageal squamous cell carcinoma (ESCC) risk, while poultry consumption was not associated with ESCC risk. Additionally, neither poultry nor fish consumption was associated with esophageal adenocarcinoma risk. Our results suggest that fish consumption may have a potential role in EC prevention, while poultry intake has no effect. However, because the majority of data was from case-control studies, further well-designed prospective studies are warranted. © 2013 Wiley Publishing Asia Pty Ltd.

  10. Study on Mechanical and Physical Behaviour of Hybrid GFRP

    Directory of Open Access Journals (Sweden)

    Nor Bahiyah Baba

    2015-01-01

    Full Text Available The paper discusses the mechanical and physical behaviour of hybrid glass fibre reinforced plastic (GFRP. Hybrid GFRP was fabricated by three different types of glass fibre, namely, 3D, woven, and chopped, which were selected and combined with mixture of polyester resin and hardener. The hybrid GFRP was investigated by varying three parameters which were the composite volume fractions, hybrid GFRP arrangement, and single type fibre. The hybrid GFRP was fabricated by using open mould hand lay-up technique. Mechanical testing was conducted by tensile test for strength and stiffness whereas physical testing was performed using water absorption and hardness. These tests were carried out to determine the effect of mechanical and physical behaviour over the hybrid GFRP. The highest volume fraction of 0.5 gives the highest strength and stiffness of 73 MPa and 821 MPa, respectively. Varying hybrid fibre arrangement which is the arrangement of chopped-woven-3D-woven-chopped showed the best value in strength of 66.2 MPa. The stiffness is best at arrangement of woven-chopped-woven-chopped-woven at 690 MPa. This arrangement also showed the lowest water absorption of 4.5%. Comparing the single fibre type, woven had overtaken the others in terms of both mechanical and physical properties.

  11. Monitoring translocations by M-FISH and three-color FISH painting techniques. A study of two radiotherapy patients

    International Nuclear Information System (INIS)

    Pouzoulet, F.; Roch-Lefevre, S.; Giraudet, AL.

    2007-01-01

    To compare translocation rate using either M-FISH or FISH-3 in two patients treated for head and neck cancer, with a view to retrospective dosimetry. Translocation analysis was performed on peripheral blood lymphocyte cultures from blood samples taken at different times during the radiotherapy (0 Gy, 12 Gy and 50 Gy) and a few months after the end of the treatment (follow-up). Estimated translocation yield varied according to the FISH technique used. At 50 Gy and follow-up points, the translocation yields were higher with FISH-3 than with M-FISH. This difference can be attributed to three events. First, an increase in complex aberrations was observed for 50 Gy and follow-up points compared with 0 Gy and 12 Gy points. Second, at the end of treatment for patient A, involvement of chromosomes 2, 4, 12 in translocations was less than expected according to the Lucas formula. Third, a clone bearing a translocation involving a FISH-3 painted chromosome was detected. More translocations were detected with M-FISH than with FISH-3, and so M-FISH is expected to improve the accuracy of chromosome aberration analyses in some situations. (author)

  12. [Study on tetrodotoxin detection and toxic puffer fish identification of roasted fish fillet at the retail in Beijing and Qingdao].

    Science.gov (United States)

    Shen, Qing; Jiang, Tao; Li, Nan; Wang, Jiahui; Han, Chunhui; Zhang, Jing; Xu, Jin; Zhang, Dongfeng; Li, Fengqin

    2014-11-01

    The roasted fish fillet sample at the retail collected in Beijing and Qingdao were detected for TTX, and the TTX positive samples was analyzed for fish species identification. TTX was tested by EUSA method and the cytochrome c oxidase I (COI) genome of TTX-positive samples was extracted and identified by DNA barcode. Totally, 90 samples were tested by EUSA and 58 (64.4%) samples were positive for TTX with the levels ranging from 0.10 mg/kg to 63.81 mg/kg. Among the TTX positive samples, 24 (41.3%) were identified containing toxic puffer fish and 21 (87.5%) were Lagocephalus lunaris, the highly toxic puffer fish. Some roasted fish fillet samples obtained from the retail in two cities were positive for TTX and contained toxic puffer fish. Based on these results, we suggest that roasted fish fillet producers should prevent toxic puffer fish from mixing in the raw material and the I regulators should strengthen the TTX surveillance and product labeling supervision of roasted fish fillet.

  13. Motivational study for an hybrid demonstrator; Dossier de motivation pour un demonstrateur hybride

    Energy Technology Data Exchange (ETDEWEB)

    Boidron, M.; Fiorini, G.L.; Thomas, J.B. [CEA Cadarache, 13 - Saint Paul lez Durance (France). Direction des Reacteurs Nucleaires; Flocard, H. [Institut National de Physique Nucleaire et de Physique des Particules (CNRS/IN2P3), 75 - Paris (France)

    2001-02-15

    This document recalls first the role of hybrid accelerator driven systems (ADS) in the domain of transmutation of long-lived fission products and minor actinides. It presents the specific contribution of these systems in the management of radioactive wastes and their technical feasibility and safety aspects. Then, follows a motivational analysis for the construction of a demonstration facility with its specifications and R and D needs: feasibility, schedule, links with other ADS-related programs, cost, international cooperation, recommendations. (J.S.)

  14. Evaluating the Effects of the Kingston Fly Ash Release on Fish Reproduction: Spring 2009 - 2010 Studies

    Energy Technology Data Exchange (ETDEWEB)

    Greeley Jr, Mark Stephen [ORNL; Adams, Marshall [ORNL; McCracken, Kitty [ORNL

    2012-05-01

    with the ability of individuals within a population to reproduce. Reproduction is thus generally considered to be the most critical life function affected by environmental contamination. From a regulatory perspective, the issue of potential contaminant-related effects on fish reproduction from the Kingston fly ash spill has particular significance because the growth and propagation of fish and other aquatic life is a specific classified use of the affected river systems. To address the potential effects of fly ash from the Kingston spill on the reproductive health of exposed fish populations, ORNL has undertaken a series of studies in collaboration with TVA that include: (1) a combined field study of metal bioaccumulation in ovaries and other fish tissues (Adams and others 2012) and the reproductive condition of sentinel fish species in reaches of the Emory and Clinch Rivers affected by the fly ash spill (the current report); (2) laboratory tests of the potential toxicity of fly ash from the spill area on fish embryonic and larval development (Greeley and others 2012); (3) additional laboratory experimentation focused on the potential effects of long-term exposures to fly ash on fish survival and reproductive competence (unpublished); and (4) a combined field and laboratory study examining the in vitro developmental success of embryos and larvae obtained from fish exposed in vivo for over two years to fly ash in the Emory and Clinch Rivers (unpublished). The current report focuses on the reproductive condition of adult female fish in reaches of the Emory and Clinch Rivers influenced by the fly ash spill at the beginning of the spring 2009 breeding season - the first breeding season immediately following the fly ash release - and during the subsequent spring 2010 breeding season. Data generated from this and related reproductive/early life stage studies provide direct input to ecological risk assessment efforts and complement and support other phases of the overall

  15. Fish reproduction

    National Research Council Canada - National Science Library

    Rocha, Maria João; Arukwe, Augustine; Kapoor, B. G

    2008-01-01

    ... of reproductive systems is essential for such studies. Fishes comprise over 28,000 species, with a remarkable variability in morphology, physiology and environmental adaptation. Knowledge on fish reproduction is scattered across numerous sources that shows a dynamic research field. The Editors believe it to be an opportune moment for a...

  16. Visitors' motives for attending a hybrid event: A case study of agricultural fair

    Directory of Open Access Journals (Sweden)

    Ivkov Milan

    2015-01-01

    Full Text Available Management of a complex events such as hybrid ones, relies on understanding a modern market trends. The purpose of this study is to determine visitors' motives for attending a hybrid event, to identify clusters based on those motives, and to help organizers and exhibitors to meet visitors' expectations. Therefore, authors performed ANOVA analysis, factor analysis and hierarchical cluster analysis. The findings clearly indicate elements of trade fairs and consumer exhibitions integrated in hybrid event and therefore, some of the main motives for visiting those two types of events are also present among hybrid event visitors. However, hybrid event tends to be more than just place for business meetings. It is also a venue for education and leisure time activities. Moreover, event organizers and exhibitors need to pay more attention on their strategic approach to managing their event activities. The paper suggests that hybrid event organizers should focus on establishing dialogue with both exhibitors and visitors.

  17. The global status of freshwater fish age validation studies and a prioritization framework for future research

    Science.gov (United States)

    Pope, Kevin L.; Hamel, Martin J.; Pegg, Mark A.; Spurgeon, Jonathan J.

    2016-01-01

    Age information derived from calcified structures is commonly used to estimate recruitment, growth, and mortality for fish populations. Validation of daily or annual marks on age structures is often assumed, presumably due to a lack of general knowledge concerning the status of age validation studies. Therefore, the current status of freshwater fish age validation studies was summarized to show where additional effort is needed, and increase the accessibility of validation studies to researchers. In total, 1351 original peer-reviewed articles were reviewed from freshwater systems that studied age in fish. Periodicity and age validation studies were found for 88 freshwater species comprising 21 fish families. The number of age validation studies has increased over the last 30 years following previous calls for more research; however, few species have validated structures spanning all life stages. In addition, few fishes of conservation concern have validated ageing structures. A prioritization framework, using a combination of eight characteristics, is offered to direct future age validation studies and close the validation information gap. Additional study, using the offered prioritization framework, and increased availability of published studies that incorporate uncertainty when presenting research results dealing with age information are needed.

  18. Lean fish consumption is associated with lower risk of metabolic syndrome: a Norwegian cross sectional study

    Directory of Open Access Journals (Sweden)

    C. Tørris

    2016-04-01

    Full Text Available Abstract Background Fish consumption may have a role in reducing the prevalence of metabolic syndrome (MetS. The aim of this study was to identify associations between fish consumption and MetS and its components, especially regarding differences concerning consumption of fatty and lean fish. Methods This cross sectional study uses data from the Tromsø 6 survey (2007–08, where a sample of 12 981 adults, aged 30–87 years (47 % men from the Norwegian general population was included. Fish consumption was assessed using food frequency questionnaires (FFQ. Blood sample assessments, anthropometric and blood pressure measurements were carried out according to standard protocols. MetS was defined using the Joint Interim Societies (JIS definition. All tests were two-sided. Analyses were performed using IBM SPSS Statistics 22 (Pearson’s correlation, Chi-Square tests, analysis of variance (ANOVA, linear and logistic regression models. Results Mean age was 57.5, and the prevalence of MetS was 22.6 %. Fish consumption once a week or more was associated with lower risk of having MetS among men (OR 0.85, CI 95 % 0.74 to 0.98, P = 0.03. In the adjusted models, lean fish consumption was associated with a decreased risk of having MetS, whereas fatty fish consumption was not associated with a decreased risk of having MetS. Both an increased fatty and lean fish consumption (0–1 times per month, 2–3 times per month, 1–3 times per week, 4–6 times per week, 1–2 times per day were associated with decreased serum triglyceride (TG, and increased high-density lipoprotein cholesterol (HDL-C. Conclusions Fish consumption may be associated with a lower risk of having MetS and consumption of lean fish seems to be driving the association. Further investigation is warranted to establish associations between fish consumption and MetS.

  19. Pedestrian hybrid beacon guide : recommendations and case study.

    Science.gov (United States)

    2014-01-01

    A pedestrian hybrid beacon (PHB) is a traffic control : device similar to a European pedestrian signal : (PELICAN) that was imported to the US and adapted by : engineers in Arizona to increase motorists awareness of : pedestrian crossings at uncon...

  20. Synthesis of Sensor Fish Data for Assessment of Fish Passage Conditions at Turbines, Spillways, and Bypass Facilities – Phase 1: The Dalles Dam Spillway Case Study

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Zhiqun; Serkowski, John A.; Fu, Tao; Carlson, Thomas J.; Richmond, Marshall C.

    2007-12-31

    This report summarizes the characterization of spillway passage conditions at The Dalles Dam in 2006 and the effort to complete a comprehensive database for data sets from The Dalles Dam spillway Sensor Fish and balloon-tagged live fish experiments. Through The Dalles Dam spillway case study, Pacific Northwest National Laboratory (PNNL) researchers evaluated the database as an efficient means for accessing and retrieving system-wide data for the U.S Army Corps of Engineers (USACE).

  1. Further study of the reactions of fishes to toxic solutions

    Energy Technology Data Exchange (ETDEWEB)

    Jones, J R.E.

    1948-01-01

    This paper records some further observations on the reactions of fish to toxic solutions. The method of experimentation resembles that described in a previous paper by the writer (Jones, 1947b). In every case the solution is presented as an alternative to the Aberystwyth tap water, which is well aerated, very soft, of pH 6.8. In experiments with sodium sulphide a supply system is arranged in which dilute sodium sulphide solution, brought to pH 6.8 by the addition of sulphuric acid, is automatically made up as it runs into the observation vessel. Gasterosteus aculeatus l. reacts negatively to a 0.001N solution almost immediately; at greater dilution the reaction time lengthens, at 0.00008N is about 47 min. Over the concentration range tested the reaction time is always shorter than the survival time. Gasterosteus is positive to 0.04N lead nitrate. As a positive reaction is also displayed to equivalent concentrations of calcium nitrate, sodium nitrate and sodium chloride it is possible that the osmotic pressure of the solution is its attractive feature. At 0.01N the positive response to lead nitrate disappears and at 0.004N is replaced by a very definite negative reaction which is maintained down to 0.00002N. The minnow (Phoxinus phoxinus l.) is also negative to dilute lead nitrate and will detect and avoid a 0.000004N solution. Gasterosteus will avoid water more acid than pH 5.6 or more alkaline than pH 11.4. Over the range 5.8-11.2 the fish are indifferent or very vaguely positive. Gasterosteus is negative to 0.04 and 0.01N ammonia solution, positive to 0.001 and 0.0001N. The general result with ammonia is thus the converse of that observed with lead nitrate.

  2. Studies on Freezing of Shell-Fish-I

    Science.gov (United States)

    Song, Dae Jin; Konagaya, Shiro; Tanaka, Takeo

    Ark shell, Anadara broughtonii(Shrenk), are commonly eaten raw or under-done in Korea, Japan, and East Asian countries. Along with a recent remarkable development of culture fisheries, Ark shell has become one of the commercially important shell-fish species. Transportation and storage of large quantities of shell-fish is becoming increasingly important. This work was begun with this background to make clear the effects of temperature and length of storage time on the quality of frozen stored ark shell. Results are as follows : (1) There was little chang in amounts of free and expressible drip from ark shell flesh frozen stored at -40°CdegC for 6 months. Water holding capacity of the same meat was almost constant over 6 months storage. However, a mounts of both drip increased markedly after 2 months storage at -10°C. (2) Protein extractibility of ark shell flesh tended to decrease gradually from the begining when stored at -10°C, while at -20°C, the protein extractibility was stable for 3 months before decreasing gradually. However at -40°C, the protein extractibility was stable for 6 months. It was found that paramyosin was very stable even when the ark shell was frozen stored at -10°C. (3) It was observed that ark shell flesh became tough when frozen. The toughness of ark shell flesh as measured by an instrument increased with frozen storage time and increased temperature. (4) In the smooth muscle, it was histologically observed that initial small ice crystals formed between muscle bundles grew larger during frozen storage. It was found that the higher the storage temperature, the bigger the ice crystals formed. Aggregation of some muscle fiber and empty spaces between muscle bundles were observd after thawed muscles frozen stored at relatively high temperature such as -10°C.

  3. Marine reserves and reproductive biomass: a case study of a heavily targeted reef fish.

    Directory of Open Access Journals (Sweden)

    Brett M Taylor

    Full Text Available Recruitment overfishing (the reduction of a spawning stock past a point at which the stock can no longer replenish itself is a common problem which can lead to a rapid and irreversible fishery collapse. Averting this disaster requires maintaining a sufficient spawning population to buffer stochastic fluctuations in recruitment of heavily harvested stocks. Optimal strategies for managing spawner biomass are well developed for temperate systems, yet remain uncertain for tropical fisheries, where the danger of collapse from recruitment overfishing looms largest. In this study, we explored empirically and through modeling, the role of marine reserves in maximizing spawner biomass of a heavily exploited reef fish, Lethrinus harak around Guam, Micronesia. On average, spawner biomass was 16 times higher inside the reserves compared with adjacent fished sites. Adult density and habitat-specific mean fish size were also significantly greater. We used these data in an age-structured population model to explore the effect of several management scenarios on L. harak demography. Under minimum-size limits, unlimited extraction and all rotational-closure scenarios, the model predicts that preferential mortality of larger and older fish prompt dramatic declines in spawner biomass and the proportion of male fish, as well as considerable declines in total abundance. For rotational closures this occurred because of the mismatch between the scales of recovery and extraction. Our results highlight how alternative management scenarios fall short in comparison to marine reserves in preserving reproductively viable fish populations on coral reefs.

  4. Stomach emptiness in fishes: Sources of variation and study design implications

    Science.gov (United States)

    Vinson, M.R.; Angradi, T.R.

    2011-01-01

    This study summarizes fish stomach content data from 369,000 fish from 402 species in 1,096 collections and reports on the percentage of individuals with empty stomachs. The mean percentage of individuals with empty stomachs among all species, locations, habitats, seasons, regions, and collection methods was 26.4%. Mean percentage of individuals with empty stomachs varied significantly among fish collection gear types, taxonomic orders, trophic groups, feeding behaviors, and habitats, and with species length at maturity. Most of the variation in percentage of individuals with empty stomachs was explained by species length at maturity, fish collection gear type, and two autecological factors: trophic group (piscivore percentage of individuals with empty stomachs > non-piscivore percentage of individuals with empty stomachs) and feeding habitat (water column feeder percentage of individuals with empty stomachs > benthic feeder percentage of individuals with empty stomachs). After accounting for variation with fish length, the percentage of individuals with empty stomachs did not vary with the stomach removal collection method (dissection vs. gastric lavage), feeding time (diurnal or nocturnal), or time of collection (day or night). The percentage of individuals with empty stomachs was similar between fresh and saltwater fish, but differed within finer habitat classifications and appeared to follow a general prey availability or productivity gradient: percentage of individuals with empty stomachs of open ocean collections > estuary collections, lentic > lotic, and pelagic > littoral. Gear type (active or passive) was the most influential factor affecting the occurrence of empty stomachs that can be readily controlled by researchers.

  5. Stability and generalization in seed dispersal networks: a case study of frugivorous fish in Neotropical wetlands.

    Science.gov (United States)

    Correa, Sandra Bibiana; Arujo, Joisiane K; Penha, Jerry; Nunes da Cunha, Catia; Bobier, Karen E; Anderson, Jill T

    2016-08-31

    When species within guilds perform similar ecological roles, functional redundancy can buffer ecosystems against species loss. Using data on the frequency of interactions between fish and fruit, we assessed whether co-occurring frugivores provide redundant seed dispersal services in three species-rich Neotropical wetlands. Our study revealed that frugivorous fishes have generalized diets; however, large-bodied fishes had greater seed dispersal breadth than small species, in some cases, providing seed dispersal services not achieved by smaller fish species. As overfishing disproportionately affects big fishes, the extirpation of these species could cause larger secondary extinctions of plant species than the loss of small specialist frugivores. To evaluate the consequences of frugivore specialization for network stability, we extracted data from 39 published seed dispersal networks of frugivorous birds, mammals and fish (our networks) across ecosystems. Our analysis of interaction frequencies revealed low frugivore specialization and lower nestedness than analyses based on binary data (presence-absence of interactions). In that case, ecosystems may be resilient to loss of any given frugivore. However, robustness to frugivore extinction declines with specialization, such that networks composed primarily of specialist frugivores are highly susceptible to the loss of generalists. In contrast with analyses of binary data, recently developed algorithms capable of modelling interaction strengths provide opportunities to enhance our understanding of complex ecological networks by accounting for heterogeneity of frugivore-fruit interactions. © 2016 The Author(s).

  6. Genomic markers reveal introgressive hybridization in the Indo-West Pacific mangroves: a case study.

    Directory of Open Access Journals (Sweden)

    Mei Sun

    2011-05-01

    Full Text Available Biodiversity of mangrove ecosystems is difficult to assess, at least partly due to lack of genetic verification of morphology-based documentation of species. Natural hybridization, on the one hand, plays an important role in evolution as a source of novel gene combinations and a mechanism of speciation. However, on the other hand, recurrent introgression allows gene flow between species and could reverse the process of genetic differentiation among populations required for speciation. To understand the dynamic evolutionary consequences of hybridization, this study examines genomic structure of hybrids and parental species at the population level. In the Indo-West Pacific, Bruguiera is one of the dominant mangrove genera and species ranges overlap extensively with one another. Morphological intermediates between sympatric Bruguiera gymnorrhiza and Bruguiera sexangula have been reported as a variety of B. sexangula or a new hybrid species, B. × rhynchopetala. However, the direction of hybridization and extent of introgression are unclear. A large number of species-specific inter-simple sequence repeat (ISSR markers were found in B. gymnorrhiza and B. sexangula, and the additive ISSR profiling of B. × rhynchopetala ascertained its hybrid status and identified its parental origin. The varying degree of scatterness among hybrid individuals in Principal Coordinate Analysis and results from NewHybrids analysis indicate that B. × rhynchopetala comprises different generations of introgressants in addition to F(1s. High genetic relatedness between B. × rhynchopetala and B. gymnorrhiza based on nuclear and chloroplast sequences suggests preferential hybrid backcrosses to B. gymnorrhiza. We conclude that B. × rhynchopetala has not evolved into an incipient hybrid species, and its persistence can be explained by recurrent hybridization and introgression. Genomic data provide insights into the hybridization dynamics of mangrove plants. Such information

  7. Variability of fish consumption within the 10 European countries participating in the European Investigation into Cancer and Nutrition (EPIC) study

    DEFF Research Database (Denmark)

    Welch, A.A.; Lund, E.; Amiano, P.

    2002-01-01

    OBJECTIVE: To describe and compare the consumption of total fish (marine foods) and the fish sub-groups - white fish, fatty fish, very fatty fish, fish products and crustacea, in participants from the European Investigation into Cancer and Nutrition (EPIC) study. DESIGN: Cross-sectional analysis...... of dietary intake using a computerised standardised 24-hour recall interview. Crude means, means and standard errors adjusted by age, season and day of the week were calculated, stratified by centre and gender. SETTING: Twenty-seven redefined centres in the 10 European countries participating in the EPIC...... study. SUBJECTS: In total, 35 955 subjects (13 031 men and 22 924 women), aged 35-74 years, selected from the main EPIC cohort. RESULTS: A six- to sevenfold variation in total fish consumption exists in women and men, between the lowest consumption in Germany and the highest in Spain. Overall, white...

  8. A study on the development of photoelastic experimental hybrid method for colour isochromatics (I)

    International Nuclear Information System (INIS)

    Hawong, Jai Sug; Nam, Jeong Hwan; Kim, Kyo Hyoung; Kwon, O Sung; Kwon, Gun; Park, Sung Han

    2010-01-01

    Isochromatics obtained from photoelastic experiment shows the stress distributions of the full field of a structure under load. Therefore, stress distributions of the structure can be read at a glance through isochromatics. Many experimental data can be obtained from isochromatics which are then used in various photoelastic experimental hybrid methods for stress analysis. Monochromatic light has however, until now been used in the photoelastic experimental hybrid method to produce black and white isochromatics. The use of black and white isochromatics in photoelastic experimental hybrid method for black and white isochromatics requires high fringe orders in order to obtain sufficient experimental data for photoelastic hybrid techniques. Accordingly, this paper develops the photoelastic experimental hybrid method for color isochromatics in which a fringe order of 1 is enough to gather the experimental data of the photoelastic experimental hybrid method. The method was applied to validate stress concentration problems. Experimental results from this study indicated that the photoelastic experimental hybrid method for color isochromatics is more precise than the photoelastic experimental hybrid method for black and white isochromatics. The use of few fringe orders in photoelastic experimental hybrid method for color isochromatics can offer significant advantages in stress analysis of real components using reflective-type photoelastic experimental method

  9. Hybrid Composite Material and Solid Particle Erosion Studies

    Science.gov (United States)

    Chellaganesh, D.; Khan, M. Adam; Ashif, A. Mohamed; Ragul Selvan, T.; Nachiappan, S.; Winowlin Jappes, J. T.

    2018-04-01

    Composite is one of the predominant material for most challenging engineering components. Most of the components are in the place of automobile structure, aircraft structures, and wind turbine blade and so on. At the same all the components are indulged to mechanical loading. Recent research on composite material are machinability, wear, tear and corrosion studies. One of the major issue on recent research was solid particle air jet erosion. In this paper hybrid composite material with and without filler. The fibre are in the combination of hemp – kevlar (60:40 wt.%) as reinforcement using epoxy as a matrix. The natural material palm and coconut shell are used as filler materials in the form of crushed powder. The process parameter involved are air jet velocity, volume of erodent and angle of impingement. Experiment performed are in eight different combinations followed from 2k (k = 3) factorial design. From the investigation surface morphology was studied using electron microscope. Mass change with respect to time are used to calculate wear rate and the influence of the process parameters. While solid particle erosion the hard particle impregnates in soft matrix material. Influence of filler material has reduced the wear and compared to plain natural composite material.

  10. Technical Resources for Fish and Shellfish Consumption

    Science.gov (United States)

    Information on ways to develop local fish advisories, access national state and local fish advisories, obtain information on fish tissue contamination and fish tissue studies, and access information on fish consumption and human health.

  11. Combined cycle solar central receiver hybrid power system study. Volume III. Appendices. Final technical report

    Energy Technology Data Exchange (ETDEWEB)

    None

    1979-11-01

    A design study for a 100 MW gas turbine/steam turbine combined cycle solar/fossil-fuel hybrid power plant is presented. This volume contains the appendices: (a) preconceptual design data; (b) market potential analysis methodology; (c) parametric analysis methodology; (d) EPGS systems description; (e) commercial-scale solar hybrid power system assessment; and (f) conceptual design data lists. (WHK)

  12. Integrating Quality Matters into Hybrid Course Design: A Principles of Marketing Case Study

    Science.gov (United States)

    Young, Mark R.

    2014-01-01

    Previous research supports the idea that the success of hybrid or online delivery modes is more a function of course design than delivery media. This article describes a case study of a hybrid Principles of Marketing course that implemented a comprehensive redesign based on design principles espoused by the Quality Matters Program, a center for…

  13. Pedagogy and Process: A Case Study of Writing in a Hybrid Learning Model

    Science.gov (United States)

    Keiner, Jason F.

    2017-01-01

    This qualitative case study explored the perceived experiences and outcomes of writing in a hybrid model of instruction in a large suburban high school. In particular, the impact of a hybrid model on the writing process and on future writing performance were examined. In addition, teacher expectation and teacher attitude and their impact upon…

  14. Higher freshwater fish and sea fish intake is inversely associated with colorectal cancer risk among Chinese population: a case-control study.

    Science.gov (United States)

    Xu, Ming; Fang, Yu-Jing; Chen, Yu-Ming; Lu, Min-Shan; Pan, Zhi-Zhong; Yan, Bo; Zhong, Xiao; Zhang, Cai-Xia

    2015-08-12

    The association between specific fish intake and colorectal cancer risk remains controversial. This study aimed to examine the association between specific fish intake and colorectal cancer risk in Chinese population in a large case control study. During July 2010 to November 2014, 1189 eligible colorectal cancer cases and 1189 frequency-matched controls (age and sex) completed in-person interviews. A validated food frequency questionnaire was used to estimate dietary intake. Multivariate logistical regression models were used to estimate the odds ratio (OR) and 95% confidence interval (95% CI) after adjusting for various confounders. A strong inverse association was found between freshwater fish intake and colorectal cancer risk. Compared with the lowest quartile, the highest quartile intake showed a risk reduction of 53% (OR 0.47, 95% CI = 0.36-0.60, Ptrend colorectal cancer risk. These results indicate that higher consumption of freshwater fish, sea fish and fresh fish is associated with a lower risk of colorectal caner.

  15. Long-term feeding studies in mice fed a diet containing irradiated fish. I

    International Nuclear Information System (INIS)

    Petten, L.E. van; Calkins, J.E.; McConnell, R.F.; Gottschalk, H.M.; Elias, P.S.

    1980-01-01

    A wholesomeness feeding study was carried out in mice fed equal amounts of cod or redfish, comprising 45% of the diet. Three groups of animals received either irradiated [1.75 kGy (175 krad)] fish, non-irradiated fish or stock ration. A 90-day subchronic study, a multigeneration reproduction, a dominant lethality and a teratology study were carried out together with an 80-week oncogenic study on the F 1 generation. No adverse effects were noted on growth, reproduction and litter behaviour, in relation to dominant lethality, teratogenicity or oncogenicity. (Auth.)

  16. Silver nanoparticles fabricated hybrid microgels for optical and catalytic study

    International Nuclear Information System (INIS)

    Siddiq, M.; Shah, L.A.; Ambreen, J.; Sayed, M.

    2016-01-01

    In this work different compositions of smart poly(N-isopropylacrylamide-vinylacetic acid-acrylamide) poly(NIPAM-VAA-AAm) microgels with different vinyl acetic acid (VAA) contents have been synthesized successfully by conventional free radical emulsion polymerization. Silver metal nanoparticles (NPs) were fabricated inside the microgels network by insitu reduction method using sodium borohydride (NaBH/sub 4/) as reducing agent. The confirmation of polymerization and entrapment of metal NPs were carried out by FT-IR spectroscopy. Dynamic laser light scattering (DLLS) technique was used for calculating average hydrodynamic diameter of microgel particles. The optical properties of silver NPs were studied by UV-Visible spectroscopy at various conditions of pH and temperature. The hybrid microgels show red shift and increase in intensity of surface plasmon resonance (SPR) band with the increase in temperature and decrease in pH of the medium. The synthesized materials were used as catalysts in the reduction process and it was found that the catalyst composed of high amount of VAA shows enhanced catalytic activity. The apparent rate constant (k/sub app/) for catalyst composed of 12 percent VAA was doubled (5.6*10/sup -3/ sec/sup -1/) as compared to 4 percent VAA containing catalyst (2.8*10/sup -3/ sec/sup -1/). (author)

  17. Studies of evolutionary temperature adaptation: muscle function and locomotor performance in Antarctic fish.

    Science.gov (United States)

    Franklin, C E

    1998-09-01

    1. Studies of evolutionary temperature adaptation of muscle and locomotor performance in fish are reviewed with a focus on the Antarctic fauna living at subzero temperatures. 2. Only limited data are available to compare the sustained and burst swimming kinematics and performance of Antarctic, temperate and tropical species. Available data indicate that low temperatures limit maximum swimming performance and this is especially evident in fish larvae. 3. In a recent study, muscle performance in the Antarctic rock cod Notothenia coriiceps at 0 degree C was found to be sufficient to produce maximum velocities during burst swimming that were similar to those seen in the sculpin Myoxocephalus scorpius at 10 degrees C, indicating temperature compensation of muscle and locomotor performance in the Antarctic fish. However, at 15 degrees C, sculpin produce maximum swimming velocities greater than N. coriiceps at 0 degree C. 4. It is recommended that strict hypothesis-driven investigations using ecologically relevant measures of performance are undertaken to study temperature adaptation in Antarctic fish. Recent detailed phylogenetic analyses of the Antarctic fish fauna and their temperate relatives will allow a stronger experimental approach by helping to separate what is due to adaptation to the cold and what is due to phylogeny alone.

  18. A Pilot Study of Pedestrians with Visual Impairments Detecting Traffic Gaps and Surges Containing Hybrid Vehicles.

    Science.gov (United States)

    Emerson, Robert Wall; Naghshineh, Koorosh; Hapeman, Julie; Wiener, William

    2011-03-01

    The increasing number of hybrid and quiet internal combustion engine vehicles may impact the travel abilities of pedestrians who are blind. Pedestrians who rely on auditory cues for structuring their travel may face challenges in making crossing decisions in the presence of quiet vehicles. This article describes results of initial studies looking at the crossing decisions of pedestrians who are blind at an uncontrolled crossing (no traffic control) and a light controlled intersection. The presence of hybrid vehicles was a factor in each situation. At the uncontrolled crossing, Toyota hybrids were most difficult to detect but crossing decisions were made more often in small gaps ended by a Honda hybrid. These effects were seen only at speed under 20 mph. At the light controlled intersection, parallel surges of traffic were most difficult to detect when made up only of a Ford Escape hybrid. Results suggest that more controlled studies of vehicle characteristics impacting crossing decisions of pedestrians who are blind are warranted.

  19. Environmental Effects of Hydrokinetic Turbines on Fish: Desktop and Laboratory Flume Studies

    Energy Technology Data Exchange (ETDEWEB)

    Jacobson, Paul T. [Electric Power Research Institute; Amaral, Stephen V. [Alden Research Laboratory; Castro-Santos, Theodore [U.S. Geological Survey; Giza, Dan [Alden Research Laboratory; Haro, Alexander J. [U.S. Geological Survey; Hecker, George [Alden Research Laboratory; McMahon, Brian [Alden Research Laboratory; Perkins, Norman [Alden Research Laboratory; Pioppi, Nick [Alden Research Laboratory

    2012-12-31

    This collection of three reports describes desktop and laboratory flume studies that provide information to support assessment of the potential for injury and mortality of fish that encounter hydrokinetic turbines of various designs installed in tidal and river environments. Behavioral responses to turbine exposure also are investigated to support assessment of the potential for disruptions to upstream and downstream movements of fish. The studies: (1) conducted an assessment of potential injury mechanisms using available data from studies with conventional hydro turbines; (2) developed theoretical models for predicting blade strike probabilities and mortality rates; and (3) performed flume testing with three turbine designs and several fish species and size groups in two laboratory flumes to estimate survival rates and document fish behavior. The project yielded three reports which this document comprises. The three constituent documents are addressed individually below Fish Passage Through Turbines: Application of Conventional Hydropower Data to Hydrokinetic Technologies Fish passing through the blade sweep of a hydrokinetic turbine experience a much less harsh physical environment than do fish entrained through conventional hydro turbines. The design and operation of conventional turbines results in high flow velocities, abrupt changes in flow direction, relatively high runner rotational and blade speeds, rapid and significant changes in pressure, and the need for various structures throughout the turbine passageway that can be impacted by fish. These conditions generally do not occur or are not significant factors for hydrokinetic turbines. Furthermore, compared to conventional hydro turbines, hydrokinetic turbines typically produce relatively minor changes in shear, turbulence, and pressure levels from ambient conditions in the surrounding environment. Injuries and mortality from mechanical injuries will be less as well, mainly due to low rotational speeds and

  20. Scoping studies of 233U breeding fusion fission hybrid

    International Nuclear Information System (INIS)

    Maniscalco, J.A.; Hansen, L.F.; Allen, W.O.

    1978-05-01

    Neutronic calculations have been carried out in order to design a laser fusion driven hybrid blanket which maximizes 233 U production per unit of thermal energy (greater than or equal to 1 kg/MW/sub T/-year) with acceptable fusion energy multiplication (M/sub F/ approximately 4). Two hybrid blankets, a thorium and a uranium-thorium blanket, are discussed in detail and their performance is evaluated by incorporating them into an existing hybrid design (the LLL/Bechtel design). The overall performance of the two laser fusion driven 233 U producers is discussed and estimates are given of (1) the number of equivalent thermal power fission reactors (LWR, HWR, SSCR and HTGR) that these fusion breeders can fuel, (2) their capital cost, and (3) the cost of electricity in the combined fusion breder-converter reactor scenario

  1. CSEM-steel hybrid wiggler/undulator magnetic field studies

    International Nuclear Information System (INIS)

    Halbach, K.; Hoyer, E.; Marks, S.; Plate, D.; Shuman, D.

    1985-05-01

    Current design of permanent magnet wiggler/undulators use either pure charge sheet equivalent material (CSEM) or the CSEM-Steel hybrid configuration. Hybrid configurations offer higher field strength at small gaps, field distributions dominated by the pole surfaces and pole tuning. Nominal performance of the hybrid is generally predicted using a 2-D magnetic design code neglecting transverse geometry. Magnetic measurements are presented showing transverse configuration influence on performance, from a combination of models using CSEMs, REC (H/sub c/ = 9.2 kOe) and NdFe (H/sub c/ = 10.7 kOe), different pole widths and end configurations. Results show peak field improvement using NdFe in place of REC in identical models, gap peak field decrease with pole width decrease (all results less than computed 2-D fields), transverse gap field distributions, and importance of CSEM material overhanging the poles in the transverse direction for highest gap fields

  2. Scoping studies of 233U breeding fusion fission hybrid

    International Nuclear Information System (INIS)

    Maniscalco, J.A.; Hansen, L.F.; Allen, W.O.

    1978-01-01

    Neutronic calculations have been carried out in order to design a laser fusion driven hybrid blanket which maximizes 233 U production per unit of thermal energy (greater than or equal to 1 kg/MW/sub T/-year) with acceptable fusion energy multiplication (M/sub F/ approx. 4). Two hybrid blankets, a thorium and a uranium--thorium blanket, are discussed in detail and their performance is evaluated by incorporating them into an existing hybrid design (the LLL/Bechtel design). The overall performance of the two laser fusion driven 233 U producers is discussed and estimates are given of (1) the number of equivalent thermal power fission reactors (LWR, HWR, SSCR and HTGR) that these fusion breeders can fuel, (2) their capital cost, and (3) the cost of electricity in the combined fusion breeder-converter reactor scenario

  3. Predicting the Effects of Man-Made Fishing Canals on Floodplain Inundation - A Modelling Study

    Science.gov (United States)

    Shastry, A. R.; Durand, M. T.; Neal, J. C.; Fernandez, A.; Hamilton, I.; Kari, S.; Laborde, S.; Mark, B. G.; Arabi, M.; Moritz, M.; Phang, S. C.

    2016-12-01

    The Logone floodplain in northern Cameroon is an excellent example of coupled human-natural systems because of strong couplings between the social, ecological and hydrologic systems. Overbank flow from the Logone River in September and October is essential for agriculture and fishing livelihoods. Fishers dig canals to catch fish during the flood's recession to the river in November and December by installing nets at the intersection of canals and the river. Fishing canals connect the river to natural depressions in the terrain and may serve as a man-made extension of the river drainage network. In the last four decades, there has been an exponential increase in the number of canals which may affect flood hydraulics and the fishery. The goal of this study is to characterize the relationship between the fishing canals and flood dynamics in the Logone floodplain, specifically, parameters of flooding and recession timings and the duration of inundation. To do so, we model the Bara region ( 30 km2) of the floodplain using LISFLOOD-FP, a two-dimensional hydrodynamic model with sub-grid parameterizations of canals. We use a simplified version of the hydraulic system at a grid-cell size of 30-m, using synthetic topography, parameterized fishing canals, and representing fishnets as a combination of weir and mesh screens. The inflow at Bara is obtained from a separate, lower resolution (1-km grid-cell) model forced by daily discharge records obtained from Katoa, located 25-km upstream of Bara. Preliminary results show more canals lead to early recession of flood and a shorter duration of flood inundation. A shorter duration of flood inundation reduces the period of fish growth and will affect fisher catch returns. Understanding the couplings within the system is important for predicting long-term dynamics and the impact of building more fishing canals.

  4. Experimental parametric study of a biomimetic fish robot actuated by piezoelectric actuators

    Science.gov (United States)

    Wiguna, T.; Park, Hoon C.; Heo, S.; Goo, Nam S.

    2007-04-01

    This paper presents an experiment and parametric study of a biomimetic fish robot actuated by the Lightweight Piezocomposite Actuator (LIPCA). The biomimetic aspects in this work are the oscillating tail beat motion and shape of caudal fin. Caudal fins that resemble fins of BCF (Body and Caudal Fin) mode fish were made in order to perform parametric study concerning the effect of caudal fin characteristics on thrust production at an operating frequency range. The observed caudal fin characteristics are the shape, stiffness, area, and aspect ratio. It is found that a high aspect ratio caudal fin contributes to high swimming speed. The robotic fish propelled by artificial caudal fins shaped after thunniform-fish and mackerel caudal fins, which have relatively high aspect ratio, produced swimming speed as high as 2.364 cm/s and 2.519 cm/s, respectively, for a 300 V p-p input voltage excited at 0.9 Hz. Thrust performance of the biomimetic fish robot is examined by calculating Strouhal number, Froude number, Reynolds number, and power consumption.

  5. Plasma environment of Titan: a 3-D hybrid simulation study

    Directory of Open Access Journals (Sweden)

    S. Simon

    2006-05-01

    Full Text Available Titan possesses a dense atmosphere, consisting mainly of molecular nitrogen. Titan's orbit is located within the Saturnian magnetosphere most of the time, where the corotating plasma flow is super-Alfvénic, yet subsonic and submagnetosonic. Since Titan does not possess a significant intrinsic magnetic field, the incident plasma interacts directly with the atmosphere and ionosphere. Due to the characteristic length scales of the interaction region being comparable to the ion gyroradii in the vicinity of Titan, magnetohydrodynamic models can only offer a rough description of Titan's interaction with the corotating magnetospheric plasma flow. For this reason, Titan's plasma environment has been studied by using a 3-D hybrid simulation code, treating the electrons as a massless, charge-neutralizing fluid, whereas a completely kinetic approach is used to cover ion dynamics. The calculations are performed on a curvilinear simulation grid which is adapted to the spherical geometry of the obstacle. In the model, Titan's dayside ionosphere is mainly generated by solar UV radiation; hence, the local ion production rate depends on the solar zenith angle. Because the Titan interaction features the possibility of having the densest ionosphere located on a face not aligned with the ram flow of the magnetospheric plasma, a variety of different scenarios can be studied. The simulations show the formation of a strong magnetic draping pattern and an extended pick-up region, being highly asymmetric with respect to the direction of the convective electric field. In general, the mechanism giving rise to these structures exhibits similarities to the interaction of the ionospheres of Mars and Venus with the supersonic solar wind. The simulation results are in agreement with data from recent Cassini flybys.

  6. Plasma environment of Titan: a 3-D hybrid simulation study

    Directory of Open Access Journals (Sweden)

    S. Simon

    2006-05-01

    Full Text Available Titan possesses a dense atmosphere, consisting mainly of molecular nitrogen. Titan's orbit is located within the Saturnian magnetosphere most of the time, where the corotating plasma flow is super-Alfvénic, yet subsonic and submagnetosonic. Since Titan does not possess a significant intrinsic magnetic field, the incident plasma interacts directly with the atmosphere and ionosphere. Due to the characteristic length scales of the interaction region being comparable to the ion gyroradii in the vicinity of Titan, magnetohydrodynamic models can only offer a rough description of Titan's interaction with the corotating magnetospheric plasma flow. For this reason, Titan's plasma environment has been studied by using a 3-D hybrid simulation code, treating the electrons as a massless, charge-neutralizing fluid, whereas a completely kinetic approach is used to cover ion dynamics. The calculations are performed on a curvilinear simulation grid which is adapted to the spherical geometry of the obstacle. In the model, Titan's dayside ionosphere is mainly generated by solar UV radiation; hence, the local ion production rate depends on the solar zenith angle. Because the Titan interaction features the possibility of having the densest ionosphere located on a face not aligned with the ram flow of the magnetospheric plasma, a variety of different scenarios can be studied. The simulations show the formation of a strong magnetic draping pattern and an extended pick-up region, being highly asymmetric with respect to the direction of the convective electric field. In general, the mechanism giving rise to these structures exhibits similarities to the interaction of the ionospheres of Mars and Venus with the supersonic solar wind. The simulation results are in agreement with data from recent Cassini flybys.

  7. Study on modes of energy action in laser-induction hybrid cladding

    International Nuclear Information System (INIS)

    Huang Yongjun; Zeng Xiaoyan

    2009-01-01

    The shape and microstructure in laser-induction hybrid cladding were investigated, in which the cladding material was provided by means of three different methods including the powder feeding, cold pre-placed coating (CPPC) and thermal pre-placed coating (TPPC). Moreover, the modes of energy action in laser-induction hybrid cladding were also studied. The results indicate that the cladding material supplying method has an important influence on the shape and microstructure of coating. The influence is decided by the mode of energy action in laser-induction hybrid cladding. During the TPPC hybrid cladding of Ni-based alloy, the laser and induction heating are mainly performed on coating. During the CPPC hybrid cladding of Ni-based alloy, the laser and induction heating are mainly performed on coating and substrate surface, respectively. In powder feeding hybrid cladding, a part of laser is absorbed by the powder particles directly, while the other part of laser penetrating powder cloud radiates on the molten pool. Meanwhile, the induction heating is entirely performed on the substrate. In addition, the wetting property on the interface is improved and the metallurgical bond between the coating and substrate is much easier to form. Therefore, the powder feeding laser-induction hybrid cladding has the highest cladding efficiency and the best bond property among three hybrid cladding methods.

  8. Molecular identification and histopathological study of natural Streptococcus agalactiae infection in hybrid tilapia (Oreochromis niloticus).

    Science.gov (United States)

    Laith, A A; Ambak, Mohd Azmi; Hassan, Marina; Sheriff, Shahreza Md; Nadirah, Musa; Draman, Ahmad Shuhaimi; Wahab, Wahidah; Ibrahim, Wan Nurhafizah Wan; Aznan, Alia Syafiqah; Jabar, Amina; Najiah, Musa

    2017-01-01

    The main objective of this study was to emphasize on histopathological examinations and molecular identification of Streptococcus agalactiae isolated from natural infections in hybrid tilapia ( Oreochromis niloticus ) in Temerloh Pahang, Malaysia, as well as to determine the susceptibility of the pathogen strains to various currently available antimicrobial agents. The diseased fishes were observed for variable clinical signs including fin hemorrhages, alterations in behavior associated with erratic swimming, exophthalmia, and mortality. Tissue samples from the eyes, brain, kidney, liver, and spleen were taken for bacterial isolation. Identification of S. agalactiae was screened by biochemical methods and confirmed by VITEK 2 and 16S rRNA gene sequencing. The antibiogram profiling of the isolate was tested against 18 standard antibiotics included nitrofurantoin, flumequine, florfenicol, amoxylin, doxycycline, oleandomycin, tetracycline, ampicillin, lincomycin, colistin sulfate, oxolinic acid, novobiocin, spiramycin, erythromycin, fosfomycin, neomycin, gentamycin, and polymyxin B. The histopathological analysis of eyes, brain, liver, kidney, and spleen was observed for abnormalities related to S. agalactiae infection. The suspected colonies of S. agalactiae identified by biochemical methods was observed as Gram-positive chained cocci, β-hemolytic, and non-motile. The isolate was confirmed as S. agalactiae by VITEK 2 (99% similarity), reconfirmed by 16S rRNA gene sequencing (99% similarity) and deposited in GenBank with accession no. KT869025. The isolate was observed to be resistance to neomycin and gentamicin. The most consistent gross findings were marked hemorrhages, erosions of caudal fin, and exophthalmos. Microscopic examination confirmed the presence of marked congestion and infiltration of inflammatory cell in the eye, brain, kidney, liver, and spleen. Eye samples showed damage of the lens capsule, hyperemic and hemorrhagic choroid tissue, and retina

  9. Molecular identification and histopathological study of natural Streptococcus agalactiae infection in hybrid tilapia (Oreochromis niloticus

    Directory of Open Access Journals (Sweden)

    Laith Abdul Razzak

    2017-01-01

    Full Text Available Aim: The main objective of this study was to emphasize on histopathological examinations and molecular identification of Streptococcus agalactiae isolated from natural infections in hybrid tilapia (Oreochromis niloticus in Temerloh Pahang, Malaysia, as well as to determine the susceptibility of the pathogen strains to various currently available antimicrobial agents. Materials and Methods: The diseased fishes were observed for variable clinical signs including fin hemorrhages, alterations in behavior associated with erratic swimming, exophthalmia, and mortality. Tissue samples from the eyes, brain, kidney, liver, and spleen were taken for bacterial isolation. Identification of S. agalactiae was screened by biochemical methods and confirmed by VITEK 2 and 16S rRNA gene sequencing. The antibiogram profiling of the isolate was tested against 18 standard antibiotics included nitrofurantoin, flumequine, florfenicol, amoxylin, doxycycline, oleandomycin, tetracycline, ampicillin, lincomycin, colistin sulfate, oxolinic acid, novobiocin, spiramycin, erythromycin, fosfomycin, neomycin, gentamycin, and polymyxin B. The histopathological analysis of eyes, brain, liver, kidney, and spleen was observed for abnormalities related to S. agalactiae infection. Results: The suspected colonies of S. agalactiae identified by biochemical methods was observed as Gram-positive chained cocci, β-hemolytic, and non-motile. The isolate was confirmed as S. agalactiae by VITEK 2 (99% similarity, reconfirmed by 16S rRNA gene sequencing (99% similarity and deposited in GenBank with accession no. KT869025. The isolate was observed to be resistance to neomycin and gentamicin. The most consistent gross findings were marked hemorrhages, erosions of caudal fin, and exophthalmos. Microscopic examination confirmed the presence of marked congestion and infiltration of inflammatory cell in the eye, brain, kidney, liver, and spleen. Eye samples showed damage of the lens capsule

  10. Hybridization studies in Okra (Abelmoschus spp (L.) Moench)

    International Nuclear Information System (INIS)

    Amitaaba, Theophilus

    2016-07-01

    quantitative traits studied. Clustering pattern based on quantitative traits largely revealed no duplicates and clustering pattern especially among parental accessions, appears to reflect relationship based upon speciation as parental accessions belonging to A. caillei are clustered towards one end of the dendrogram, while members belonging to A. esculentus clustered towards the opposite end. Contributions of the three principal components were 45.98 %, 23.31 %, and 14.46% for the first (PC1), second (PC2) and third (PC3) respectively, with corresponding Eigen values of 3.21837, 1.63171 and 1.01212 respectively cumulating into maximum of 83.75 % of total variance. These results demonstrate possibility of producing superior hybrids of okra through artificial cross-pollination. Key recommendations based on these findings include (i) use of molecular markers to confirm results of morphological characterisation and also to better understand inheritance of qualitative traits. (ii) Genes linked to agronomically important traits in okra should be genetically mapped through Quantitative Traits Loci (QTLs) to serve as a baseline data platform for researchers and breeders. (iii) Further studies on inheritance of qualitative traits stretching to the F2 or even F3 generations should be carried out, preferably using molecular markers to fully understand the pattern of segregation with appropriate ratios. (au)

  11. Biological studies of Cyprinid Fish, Barbus luteus (Heckel) fromAl-Hammar Marsh in Southern Iraq

    International Nuclear Information System (INIS)

    Nasir, N.A.

    2006-01-01

    This study was carried out over a period of one year to investigate someaspects of the biology of Barbus luteus (Pisces: Cyprinidae) in the Al-Hammarmarsh area of Iraq. The fish are most abundant between February and June,followed by a steady decrease towards the end of the year. A mean monthlymortality rate of 35% per month was recorded. Total length and weight of 1002fish collected ranged between 120-320mm (mean: 174mm) and 21-275 gm (Mean:79gm) respectively. Numerically, the samples were dominated by females. Theyaccounted for about 52.7% of the total catch. The population of B. luteus wasdominated by 2+ year-olds for both sexes and they matured at this age. Themathematical relationship between the weight and length of the fish wasdetermined. The values of the exponent (b) showed that females are generallyheavier at a given length than males. The food taken by the fish was studiedand it was found that fish is principally a surface phytoplankton feeder.(author)

  12. Fish Allergy

    Science.gov (United States)

    ... Cause Blog Vision Awards Common Allergens Fish Allergy Fish Allergy Learn about fish allergy, how to read ... that you must avoid both. Allergic Reactions to Fish Finned fish can cause severe and potentially life- ...

  13. Comparative study on the growth performance of the hybrid catfish ...

    African Journals Online (AJOL)

    Growth performance of the hybrid catfish Heteroclarias reared in concrete and earthen pond systems were investigated in a 92-day experiment. Experiment was conducted using four rectangular ponds (2 concrete and 2 earthen) each measuring 14 × 6 × 1.5 metres in duplicates. The ponds were uniformly limed, fertilized ...

  14. Preliminary studies on nutritive and organoleptic properties in processed fish fillets obtained from Iran

    Directory of Open Access Journals (Sweden)

    Ali Aberoumand

    2014-06-01

    Full Text Available The effects of boiling, frying, and roasting methods on nutrients and properties some of marine fishes were studies. AOAC official methods were used for the analyses of the samples. Frying reduced the protein content of Nemipterus japonicas, while roasting reduced the protein content of Carangoides malabaricus and Saurida undosquamis. Fresh and fried C. malabaricus had 71.2% and 57.05% protein content, respectively, while N. japonicas had 57.39% and 47.51%, respectively. The highest oil content in C.malabaricus was 16.80%, followed by N.japonicus 12.80%; while the lowest oil content in S.undosquamis was 5.88%. N.japonicusis protein content reduced with frying. Some cooking methods used in the processing can have an effect on of fish nutrient composition. The texture of fried and boiled fish fillets significantly differ from that of the roasted fillets (p<0.05.

  15. FISH and PNA FISH for the diagnosis of Q fever endocarditis and vascular infections.

    Science.gov (United States)

    Prudent, Elsa; Lepidi, Hubert; Angelakis, Emmanouil; Raoult, Didier

    2018-06-13

    Purpose. Endocarditis and vascular infections are common manifestations of persistent localized infection due to Coxiella burnetii and recently, fluorescence in situ hybridization (FISH) was proposed as an alternative tool for their diagnosis. In this study, we evaluated the efficiency of FISH in a series of valve and vascular samples infected by C. burnetii. Methods. We tested 23 C. burnetii -positive valves and thrombus samples obtained from patients with Q fever endocarditis. Seven aneurysms and thrombus specimens were retrieved from patients with Q fever vascular infection. Samples were analyzed by culture, immunochemistry and FISH with oligonucleotide and PNA probes targeting C. burnetii -specific 16S ribosomal RNA sequences. Results. Immunohistochemical analysis was positive for five (17%) samples with significantly more copies of C. burnetii DNA than the negative ones ( p= 0.02). FISH was positive for 13 (43%) samples and presented 43% and 40% sensitivity compared to qPCR and culture, respectively. PNA FISH detected C. burnetii in 18 (60%) samples and presented 60% and 55% sensitivity compared to qPCR and culture, respectively. Immunohistochemistry had 38% and 28% sensitivity compared to FISH and PNA FISH, respectively. Samples found positive by both immunohistochemistry and PNA FISH contained significantly more copies of C. burnetii DNA than the negative ones ( p= 0.03). Finally, PNA FISH was more sensitive than FISH (60% versus 43%) for the detection of C. burnetii Conclusion. We provide evidence that PNA FISH and FISH are important assays for the diagnosis of C. burnetii endocarditis and vascular infections. Copyright © 2018 American Society for Microbiology.

  16. Preliminary study of the economics of enriching PWR fuel with a fusion hybrid reactor

    International Nuclear Information System (INIS)

    Kelly, J.L.

    1978-09-01

    This study is a comparison of the economics of enriching uranium oxide for pressurized water reactor (PWR) power plant fuel using a fusion hybrid reactor versus the present isotopic enrichment process. The conclusion is that privately owned hybrid fusion reactors, which simultaneously produce electrical power and enrich fuel, are competitive with the gaseous diffusion enrichment process if spent PWR fuel rods are reenriched without refabrication. Analysis of irradiation damage effects should be performed to determine if the fuel rod cladding can withstand the additional irradiation in the hybrid and second PWR power cycle. The cost competitiveness shown by this initial study clearly justifies further investigations

  17. Study on residues of 14C-Fenitrothion in a model rice-fish ecosystem and in a field rice-fish ecosystem

    International Nuclear Information System (INIS)

    Zhang Zhongliang; Wang Huaxin; Guo Dazhi; Chen Zhiyu; Wu Suchueng

    1993-01-01

    Residues of 14 C-fenitrothion in a model rice-fish ecosystem and field rice-fish ecosystem were studied. When equal amounts of the pesticide were applied, the extractable residues in brown rice (equivalent to 34.3±1.9 μg/kg fenitrothion) and rice stems and leaves (20.9±1.5 μg/kg) of the model rice-fish ecosystem were 10-15 times higher than that of the field rice-fish ecosystem (4.48±0.13 μg/kg and 1.27±0.34 μg/kg respectively). Residues in upper part of the soil (6.50±0.1--8.10±0.2 μg/kg) and lower part of the soil (1.30±0.1--1.50±0.1 μg/kg) of the model rice-fish ecosystem were 10-40 times higher than that of the field rice-fish ecosystem (0.17±0.01 μg/kg). The extractable residues in paddy water of the model ecosystem (0.30 ± 0.01 μg/kg) were similar to that of the field ecosystem (0.20±0.02 μg/kg). When the fenitrothion was sprayed on the rice plants, residues in brown rice, fish body, soil and paddy water were lower than those when the pesticide was spread on the surface of the soil. (author). 4 refs, 2 tabs

  18. A computational fluid dynamics modeling study of guide walls for downstream fish passage

    Science.gov (United States)

    Mulligan, Kevin; Towler, Brett; Haro, Alexander J.; Ahlfeld, David P.

    2017-01-01

    A partial-depth, impermeable guidance structure (or guide wall) for downstream fish passage is typically constructed as a series of panels attached to a floating boom and anchored across a water body (e.g. river channel, reservoir, or power canal). The downstream terminus of the wall is generally located nearby to a fish bypass structure. If guidance is successful, the fish will avoid entrainment in a dangerous intake structure (i.e. turbine intakes) while passing from the headpond to the tailwater of a hydroelectric facility through a safer passage route (i.e. the bypass). The goal of this study is to determine the combination of guide wall design parameters that will most likely increase the chance of surface-oriented fish being successfully guided to the bypass. To evaluate the flow field immediately upstream of a guide wall, a parameterized computational fluid dynamics model of an idealized power canal was constructed in © ANSYS Fluent v 14.5 (ANSYS Inc., 2012). The design parameters investigated were the angle and depth of the guide wall and the average approach velocity in the power canal. Results call attention to the importance of the downward to sweeping flow ratio and demonstrate how a change in guide wall depth and angle can affect this important hydraulic cue to out-migrating fish. The key findings indicate that a guide wall set at a small angle (15° is the minimum in this study) and deep enough such that sweeping flow dominant conditions prevail within the expected vertical distribution of fish approaching the structure will produce hydraulic conditions that are more likely to result in effective passage.

  19. anyFish 2.0: An open-source software platform to generate and share animated fish models to study behavior

    Directory of Open Access Journals (Sweden)

    Spencer J. Ingley

    2015-12-01

    Full Text Available Experimental approaches to studying behaviors based on visual signals are ubiquitous, yet these studies are limited by the difficulty of combining realistic models with the manipulation of signals in isolation. Computer animations are a promising way to break this trade-off. However, animations are often prohibitively expensive and difficult to program, thus limiting their utility in behavioral research. We present anyFish 2.0, a user-friendly platform for creating realistic animated 3D fish. anyFish 2.0 dramatically expands anyFish’s utility by allowing users to create animations of members of several groups of fish from model systems in ecology and evolution (e.g., sticklebacks, Poeciliids, and zebrafish. The visual appearance and behaviors of the model can easily be modified. We have added several features that facilitate more rapid creation of realistic behavioral sequences. anyFish 2.0  provides a powerful tool that will be of broad use in animal behavior and evolution and serves as a model for transparency, repeatability, and collaboration.

  20. Evaluation of Myc Gene Amplification in Prostate Cancer Using a Dual Color Chromogenic in-Situ Hybridization (Dual CISH) Assay

    OpenAIRE

    Daniel Lerda; Marta Cabrera; Jorge Flores; Luis Gutierrez; Armando Chierichetti; Martin Revol; Hernan Garcia Onto

    2013-01-01

    Objetive: The overall purpose of the study was to demonstrate applicability of the Dako dual-color chromogenic in situ hybridization (CISH) assay (DAKO Denmark, Glostrup) with respect to fluorescence in situ hybridization (FISH) probes MYC-C. Methods: MYC gene amplification by FISH and Dako dual-color CISH Results: The study showed that the dual-color CISH assay can convert Texas red and fluorescein isothiocyanate (FITC) signals into chromogenic signals. The dual –color CISH assay was p...

  1. A randomized longitudinal dietary intervention study during pregnancy: effects on fish intake, phospholipids, and body composition.

    Science.gov (United States)

    Bosaeus, Marja; Hussain, Aysha; Karlsson, Therese; Andersson, Louise; Hulthén, Lena; Svelander, Cecilia; Sandberg, Ann-Sofie; Larsson, Ingrid; Ellegård, Lars; Holmäng, Agneta

    2015-01-02

    Fish and meat intake may affect gestational weight gain, body composition and serum fatty acids. We aimed to determine whether a longitudinal dietary intervention during pregnancy could increase fish intake, affect serum phospholipid fatty acids, gestational weight gain and body composition changes during pregnancy in women of normal weight participating in the Pregnancy Obesity Nutrition and Child Health study. A second aim was to study possible effects in early pregnancy of fish intake and meat intake, respectively, on serum phospholipid fatty acids, gestational weight gain, and body composition changes during pregnancy. In this prospective, randomized controlled study, women were allocated to a control group or to a dietary counseling group that focused on increasing fish intake. Fat mass and fat-free mass were measured by air-displacement plethysmography. Reported intake of fish and meat was collected from a baseline population and from a subgroup of women who participated in each trimester of their pregnancies. Serum levels of phospholipid arachidonic acid (s-ARA), eicosapentaenoic acid (s-EPA), and docosahexaenoic acid (s-DHA) were measured during each trimester. Weekly fish intake increased only in the intervention group (n = 18) from the first to the second trimester (median difference 113 g, p = 0.03) and from the first to the third trimester (median difference 75 g, p = 0.01). In the first trimester, fish intake correlated with s-EPA (r = 0.36, p = 0.002, n = 69) and s-DHA (r = 0.34, p = 0.005, n = 69), and meat intake correlated with s-ARA (r = 0.28, p = 0.02, n = 69). Fat-free mass gain correlated with reported meat intake in the first trimester (r = 0.39, p = 0.01, n = 45). Dietary counseling throughout pregnancy could help women increase their fish intake. Intake of meat in early pregnancy may increase the gain in fat-free mass during pregnancy.

  2. Study of physiological and genotoxic status of fish populations of Azerbaijan shore of the Caspian sea

    International Nuclear Information System (INIS)

    Kasimov, R.Yu.; Palatnikov, G.M.; Mekhtiev, A.A.

    2005-01-01

    Full text : According to the studies conducted on Ecotox program of Caspian Ecological program, littoral waters of Azerbaijan and Iran are characterized with high content of heavy metals and organic compounds. Actually, all these substances are not just toxicants but mutagens as well. Taking into account these considerations, it appears important to be aware of physiological and genotoxic status of fish populations dwelling along Azerbaijan shore of the Caspian Sea for present time. The purpose of proposed project is collecting data concerning actual physiological and genotoxic status of fish populations dwelling in the littoral zone of Azerbaijan shore of the Caspian Sea. That will present the real picture of ecological status of ichtyofauna in Azerbaijan sector of the Caspian Sea and give grounds to conduct comparative analysis of changes while conducting all kinds of activities in the sea with the data provided within this project's frames. For this purpose we offer to conduct studies of fish populations along Azerbaijan littoral zone of the Caspian Sea beginning from north ones, sharing all shore into 5-6 points where fish catches should be done. Not less than 5 specimens of attached-dwelling fish, for instance gobies, are planned to catch in each of defined points. Blood samples for genotoxic analysis and samples of muscles, livers and gills for immunochemical and histopathological analysis will be taken. Along with this in these points the analysis of water - oxygen content, ph, salinity, temperature will be realized. Physiological status of fish will be evaluated by determination of serotonin-modulating protein content in ELISA-test. This analysis gives precise estimation of serotonergic system status that is very sensitive to adverse conditions. The second test - histopathological tissue studies gives grounds to determine functional status of internal organs of caught fish. The third test - micronuclei counting in erythrocytes. This technique allows

  3. Sugar Cane Genome Numbers Assumption by Ribosomal DNA FISH Techniques

    NARCIS (Netherlands)

    Thumjamras, S.; Jong, de H.; Iamtham, S.; Prammanee, S.

    2013-01-01

    Conventional cytological method is limited for polyploidy plant genome study, especially sugar cane chromosomes that show unstable numbers of each cultivar. Molecular cytogenetic as fluorescent in situ hybridization (FISH) techniques were used in this study. A basic chromosome number of sugar cane

  4. Study of the frequency of translocations and dicentrics in human spermatozoid using fluorescent in situ hybridization

    International Nuclear Information System (INIS)

    Alvarez, R.; Ponsa, I.; Tusell, L.; Genesca, A.; Miro, R.; Egozcue, J.

    1998-01-01

    Present study has intended to analyze the induction translocations and dicentrics in human sperms irradiated in vitro to the dose 4Gy by means of the use technical in situ hybridization with probes marked fluorescently

  5. FREQUENCY OF ANEUPLOID SPERMATOZOA STUDIED BY MULTICOLOR FISH IN SERIAL SEMEN SAMPLES

    Science.gov (United States)

    Frequency of aneuploid spermatozoa studied by multicolor FISH in serial semen samplesM. Vozdova1, S. D. Perreault2, O. Rezacova1, D. Zudova1 , Z. Zudova3, S. G. Selevan4, J. Rubes1,51Veterinary Research Institute, Brno, Czech Republic; 2U.S. Environmental Protection A...

  6. Maternal fish consumption, fatty acid levels and angiogenic factors: The Generation R Study

    NARCIS (Netherlands)

    P.K. Bautista-Niño (Paula); M.J. Tielemans (Myrte); S. Schalekamp-Timmermans (Sarah); J.C.J. Steenweg-de Graaff (Jolien); A. Hofman (Albert); H.W. Tiemeier (Henning); V.W.V. Jaddoe (Vincent); E.A.P. Steegers (Eric); J.F. Felix (Janine); O.H. Franco (Oscar)

    2015-01-01

    textabstractIntroduction Angiogenic factors, such as placental growth factor (PlGF) and soluble Flt-1 (sFlt-1), are key regulators of placental vascular development. Evidence from in vitro studies indicates that fatty acids can affect angiogenesis. We investigated the associations of maternal fish

  7. Comparative Study of Barotrauma Risk during Fish Passage through Kaplan Turbines

    Energy Technology Data Exchange (ETDEWEB)

    Richmond, Marshall C. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Hydrology Group; Romero-Gomez, Pedro [Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Hydrology Group; Serkowski, John A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Hydrology Group; Rakowski, Cynthia L. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Hydrology Group; Graf, Michael J. [Voith Hydro, York, PA (United States)

    2015-10-01

    Rapid pressure changes in hydroelectric turbine flows can cause barotrauma that can be hazardous to the passage of fish, in particular migratory juvenile salmonids. Although numerous laboratory tests have evaluated the effect of rapid decompression in fish species of relevance, numerical modeling studies offer the advantage of predicting, for new turbine designs, the potential risks of mortality and injury from rapid pressure change during turbine passage. However, rapid pressure change is only one of several hydraulic risks encountered by fish during turbine passage in addition to blade strike, shear, and turbulence. To better understand the role of rapid pressure changes, the present work focuses on the application of a computational fluid dynamics based method for evaluating the risk of pressure-related mortality to fish passing through an early 1960s era original hydroelectric Kaplan turbine at Wanapum Dam (Columbia River, Washington), and a modern advanced Kaplan turbine installed in 2005. The results show that the modeling approach acceptably reproduced the nadir pressure distributions compared to field data previously collected at the site using an autonomous sensor. Our findings show that the new advanced-design unit performs better, in terms of reduced barotrauma risk to fish from exposure to low pressures, than the original turbine unit. The outcomes allow for comparative analyses of turbine designs and operations prior to installation, an advantage that can potentially be integrated in the process of designing new turbine units to achieve superior environmental performance. Overall, the results show that modern turbine designs can achieve the multiple objectives of increasing power generation, lowering cavitation potential, and reducing barotrauma risks to passing fish.

  8. Classification of baseline toxicants for QSAR predictions to replace fish acute toxicity studies.

    Science.gov (United States)

    Nendza, Monika; Müller, Martin; Wenzel, Andrea

    2017-03-22

    Fish acute toxicity studies are required for environmental hazard and risk assessment of chemicals by national and international legislations such as REACH, the regulations of plant protection products and biocidal products, or the GHS (globally harmonised system) for classification and labelling of chemicals. Alternative methods like QSARs (quantitative structure-activity relationships) can replace many ecotoxicity tests. However, complete substitution of in vivo animal tests by in silico methods may not be realistic. For the so-called baseline toxicants, it is possible to predict the fish acute toxicity with sufficient accuracy from log K ow and, hence, valid QSARs can replace in vivo testing. In contrast, excess toxicants and chemicals not reliably classified as baseline toxicants require further in silico, in vitro or in vivo assessments. Thus, the critical task is to discriminate between baseline and excess toxicants. For fish acute toxicity, we derived a scheme based on structural alerts and physicochemical property thresholds to classify chemicals as either baseline toxicants (=predictable by QSARs) or as potential excess toxicants (=not predictable by baseline QSARs). The step-wise approach identifies baseline toxicants (true negatives) in a precautionary way to avoid false negative predictions. Therefore, a certain fraction of false positives can be tolerated, i.e. baseline toxicants without specific effects that may be tested instead of predicted. Application of the classification scheme to a new heterogeneous dataset for diverse fish species results in 40% baseline toxicants, 24% excess toxicants and 36% compounds not classified. Thus, we can conclude that replacing about half of the fish acute toxicity tests by QSAR predictions is realistic to be achieved in the short-term. The long-term goals are classification criteria also for further groups of toxicants and to replace as many in vivo fish acute toxicity tests as possible with valid QSAR

  9. Hybrid Computational Simulation and Study of Terahertz Pulsed Photoconductive Antennas

    Science.gov (United States)

    Emadi, R.; Barani, N.; Safian, R.; Nezhad, A. Zeidaabadi

    2016-11-01

    A photoconductive antenna (PCA) has been numerically investigated in the terahertz (THz) frequency band based on a hybrid simulation method. This hybrid method utilizes an optoelectronic solver, Silvaco TCAD, and a full-wave electromagnetic solver, CST. The optoelectronic solver is used to find the accurate THz photocurrent by considering realistic material parameters. Performance of photoconductive antennas and temporal behavior of the excited photocurrent for various active region geometries such as bare-gap electrode, interdigitated electrodes, and tip-to-tip rectangular electrodes are investigated. Moreover, investigations have been done on the center of the laser illumination on the substrate, substrate carrier lifetime, and diffusion photocurrent associated with the carriers temperature, to achieve efficient and accurate photocurrent. Finally, using the full-wave electromagnetic solver and the calculated photocurrent obtained from the optoelectronic solver, electromagnetic radiation of the antenna and its associated detected THz signal are calculated and compared with a measurement reference for verification.

  10. Hybrid epidemics--a case study on computer worm conficker.

    Directory of Open Access Journals (Sweden)

    Changwang Zhang

    Full Text Available Conficker is a computer worm that erupted on the Internet in 2008. It is unique in combining three different spreading strategies: local probing, neighbourhood probing, and global probing. We propose a mathematical model that combines three modes of spreading: local, neighbourhood, and global, to capture the worm's spreading behaviour. The parameters of the model are inferred directly from network data obtained during the first day of the Conficker epidemic. The model is then used to explore the tradeoff between spreading modes in determining the worm's effectiveness. Our results show that the Conficker epidemic is an example of a critically hybrid epidemic, in which the different modes of spreading in isolation do not lead to successful epidemics. Such hybrid spreading strategies may be used beneficially to provide the most effective strategies for promulgating information across a large population. When used maliciously, however, they can present a dangerous challenge to current internet security protocols.

  11. Hybrid epidemics--a case study on computer worm conficker.

    Science.gov (United States)

    Zhang, Changwang; Zhou, Shi; Chain, Benjamin M

    2015-01-01

    Conficker is a computer worm that erupted on the Internet in 2008. It is unique in combining three different spreading strategies: local probing, neighbourhood probing, and global probing. We propose a mathematical model that combines three modes of spreading: local, neighbourhood, and global, to capture the worm's spreading behaviour. The parameters of the model are inferred directly from network data obtained during the first day of the Conficker epidemic. The model is then used to explore the tradeoff between spreading modes in determining the worm's effectiveness. Our results show that the Conficker epidemic is an example of a critically hybrid epidemic, in which the different modes of spreading in isolation do not lead to successful epidemics. Such hybrid spreading strategies may be used beneficially to provide the most effective strategies for promulgating information across a large population. When used maliciously, however, they can present a dangerous challenge to current internet security protocols.

  12. Hybrid Epidemics—A Case Study on Computer Worm Conficker

    Science.gov (United States)

    Zhang, Changwang; Zhou, Shi; Chain, Benjamin M.

    2015-01-01

    Conficker is a computer worm that erupted on the Internet in 2008. It is unique in combining three different spreading strategies: local probing, neighbourhood probing, and global probing. We propose a mathematical model that combines three modes of spreading: local, neighbourhood, and global, to capture the worm’s spreading behaviour. The parameters of the model are inferred directly from network data obtained during the first day of the Conficker epidemic. The model is then used to explore the tradeoff between spreading modes in determining the worm’s effectiveness. Our results show that the Conficker epidemic is an example of a critically hybrid epidemic, in which the different modes of spreading in isolation do not lead to successful epidemics. Such hybrid spreading strategies may be used beneficially to provide the most effective strategies for promulgating information across a large population. When used maliciously, however, they can present a dangerous challenge to current internet security protocols. PMID:25978309

  13. Study of the cross-reactivity of fish allergens based on a questionnaire and blood testing

    Directory of Open Access Journals (Sweden)

    Yukihiro Kobayashi

    2016-07-01

    Conclusions: Most patients with fish allergies displayed allergic symptoms following the intake of various fish species. In addition, fish parvalbumin and collagen were causative factors of fish allergy and were highly cross-reactive fish panallergens. Therefore, current laws should be revised in Japan and South Korea.

  14. Face recognition: database acquisition, hybrid algorithms, and human studies

    Science.gov (United States)

    Gutta, Srinivas; Huang, Jeffrey R.; Singh, Dig; Wechsler, Harry

    1997-02-01

    One of the most important technologies absent in traditional and emerging frontiers of computing is the management of visual information. Faces are accessible `windows' into the mechanisms that govern our emotional and social lives. The corresponding face recognition tasks considered herein include: (1) Surveillance, (2) CBIR, and (3) CBIR subject to correct ID (`match') displaying specific facial landmarks such as wearing glasses. We developed robust matching (`classification') and retrieval schemes based on hybrid classifiers and showed their feasibility using the FERET database. The hybrid classifier architecture consist of an ensemble of connectionist networks--radial basis functions-- and decision trees. The specific characteristics of our hybrid architecture include (a) query by consensus as provided by ensembles of networks for coping with the inherent variability of the image formation and data acquisition process, and (b) flexible and adaptive thresholds as opposed to ad hoc and hard thresholds. Experimental results, proving the feasibility of our approach, yield (i) 96% accuracy, using cross validation (CV), for surveillance on a data base consisting of 904 images (ii) 97% accuracy for CBIR tasks, on a database of 1084 images, and (iii) 93% accuracy, using CV, for CBIR subject to correct ID match tasks on a data base of 200 images.

  15. Organophosphonate functionalized silicon nanowires for DNA hybridization studies

    Energy Technology Data Exchange (ETDEWEB)

    Pedone, Daniel; Cattani Scholz, Anna; Birner, Stefan; Abstreiter, Gerhard [WSI, TU Muenchen (Germany); Dubey, Manish; Schwartz, Jeffrey [Princeton University, NJ (United States); Tornow, Marc [IHT, TU Braunschweig (Germany)

    2007-07-01

    Semiconductor nanowire field effect devices have great appeal for label-free sensing applications due to their sensitivity to surface potential changes that may originate from charged adsorbates. In addition to requiring high sensitivity, suitable passivation and functionalization of the semiconductor surface is obligatory. We have fabricated both freely suspended and oxide-supported silicon nanowires from Silicon-on-Insulator substrates using standard nanopatterning methods (EBL, RIE) and sacrificial oxide layer etching. Subsequent to nanofabrication, the devices were first coated with an hydroxyalkylphosphonate monolayer and then bound via bifunctional linker groups to single stranded DNA or PNA oligonucleotides, respectively. We investigated DNA hybridization on such functionalized nanowires using a difference resistance setup, where subtracting the reference signal from a second wire could be used to exclude most non-specific effects. A net change in surface potential on the order of a few mV could be detected upon addition of the complementary DNA strand. This surface potential change corresponds to the hybridization of about 10{sup 10}cm{sup -2} probe strands according to our model calculations that takes into account the entire hybrid system in electrolyte solution.

  16. Study of lower hybrid current drive for the demonstration reactor

    Energy Technology Data Exchange (ETDEWEB)

    Molavi-Choobini, Ali Asghar [Dept. of Physics, Faculty of Engineering, Islamic Azad University, Shahr-e-kord Branch, Shahr-e-kord (Iran, Islamic Republic of); Naghidokht, Ahmed [Dept. of Physics, Urmia University, Urmia (Iran, Islamic Republic of); Karami, Zahra [Dept. of Engineering, Islamic Azad University, Zanjan Branch, Zanjan (Iran, Islamic Republic of)

    2016-06-15

    Steady-state operation of a fusion power plant requires external current drive to minimize the power requirements, and a high fraction of bootstrap current is required. One of the external sources for current drive is lower hybrid current drive, which has been widely applied in many tokamaks. Here, using lower hybrid simulation code, we calculate electron distribution function, electron currents and phase velocity changes for two options of demonstration reactor at the launched lower hybrid wave frequency 5 GHz. Two plasma scenarios pertaining to two different demonstration reactor options, known as pulsed (Option 1) and steady-state (Option 2) models, have been analyzed. We perceive that electron currents have major peaks near the edge of plasma for both options but with higher efficiency for Option 1, although we have access to wider, more peripheral regions for Option 2. Regarding the electron distribution function, major perturbations are at positive velocities for both options for flux surface 16 and at negative velocities for both options for flux surface 64.

  17. Study on hybrid multi-objective optimization algorithm for inverse treatment planning of radiation therapy

    International Nuclear Information System (INIS)

    Li Guoli; Song Gang; Wu Yican

    2007-01-01

    Inverse treatment planning for radiation therapy is a multi-objective optimization process. The hybrid multi-objective optimization algorithm is studied by combining the simulated annealing(SA) and genetic algorithm(GA). Test functions are used to analyze the efficiency of algorithms. The hybrid multi-objective optimization SA algorithm, which displacement is based on the evolutionary strategy of GA: crossover and mutation, is implemented in inverse planning of external beam radiation therapy by using two kinds of objective functions, namely the average dose distribution based and the hybrid dose-volume constraints based objective functions. The test calculations demonstrate that excellent converge speed can be achieved. (authors)

  18. Feasibility study of a hybrid plants (photovoltaic–LPG generator system for rural electrification

    Directory of Open Access Journals (Sweden)

    Adouane Mabrouk

    2016-01-01

    Full Text Available The present study investigates the possibility of using a stand-alone photovoltaic/LPG (liquid petroleum gas generator hybrid power system for low-cost electricity production which can satisfy the energy load requirements of a typical remote and isolated rural area. In this context, the optimal dimensions to improve the technical and economical performances of the hybrid system are determined according to the load energy requirements. The proposed system's installation and operating costs are simulated using the Hybrid Optimization Model for Electric Renewable (HOMER, the solar radiation and the system components costs as inputs; and then compared with those of other supply options such as diesel generation.

  19. A study on the control of a hybrid MTDC system supplying a passive network

    DEFF Research Database (Denmark)

    Kotb, Omar; Ghandhari, Mehrdad; Eriksson, Robert

    2014-01-01

    A hybrid Multi-Terminal DC (MTDC) system can combine the benefits of both Line Commutated Converter (LCC) and Voltage Source Converter (VSC) technologies in the form of reduced losses and flexibility to connect to weak and passive grids. In this paper, an analysis of control strategies used...... in a hybrid MTDC system is presented. A case study of a four terminal hybrid MTDC system supplying a passive AC network was considered for simulation study. A control scheme based on voltage margin was developed to cope with the condition of main DC voltage controlling station tripping. Two various control...... scenarios for controlling the VSCs connected to the passive network were presented and compared. The system performance was studied through EMTP-RV simulations under different disturbances. The results show the ability of selected converter control modes and proposed control schemes to operate the hybrid...

  20. 4-Aminoquinoline-pyrimidine hybrids: synthesis, antimalarial activity, heme binding and docking studies.

    Science.gov (United States)

    Kumar, Deepak; Khan, Shabana I; Tekwani, Babu L; Ponnan, Prija; Rawat, Diwan S

    2015-01-07

    A series of novel 4-aminoquinoline-pyrimidine hybrids has been synthesized and evaluated for their antimalarial activity. Several compounds showed promising in vitro antimalarial activity against both CQ-sensitive and CQ-resistant strains with high selectivity index. All the compounds were found to be non-toxic to the mammalian cell lines. Selected compound 7g exhibited significant suppression of parasitemia in the in vivo assay. The heme binding studies were conducted to determine the mode of action of these hybrid molecules. These compounds form a stable 1:1 complex with hematin suggesting that heme may be one of the possible targets of these hybrids. The interaction of these conjugate hybrids was also investigated by the molecular docking studies in the binding site of PfDHFR. The pharmacokinetic property analysis of best active compounds was also studied using ADMET prediction. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  1. Fish with thermolabile sex determination (TSD) as models to study brain sex differentiation.

    Science.gov (United States)

    Blázquez, Mercedes; Somoza, Gustavo M

    2010-05-01

    As fish are ectothermic animals, water temperature can affect their basic biological processes such as larval development, growth and reproduction. Similar to reptiles, the incubation temperature during early phases of development is capable to modify sex ratios in a large number of fish species. This phenomenon, known as thermolabile sex determination (TSD) was first reported in Menidia menidia, a species belonging to the family Atherinopsidae. Since then, an increasing number of fish have also been found to exhibit TSD. Traditionally, likewise in reptiles, several TSD patterns have been described in fish, however it has been recently postulated that only one, females at low temperatures and males at high temperatures, may represent the "real" or "true" TSD. Many studies regarding the influence of temperature on the final sex ratios have been focused on the expression and activity of gonadal aromatase, the enzyme involved in the conversion of androgens into estrogens and encoded by the cyp19a1a gene. In this regard, teleost fish, may be due to a whole genome duplication event, produce another aromatase enzyme, commonly named brain aromatase, encoded by the cyp19a1b gene. Contrary to what has been described in other vertebrates, fish exhibit very high levels of aromatase activity in the brain and therefore they synthesize high amounts of neuroestrogens. However, its biological significance is still not understood. In addition, the mechanism whereby temperature can induce the development of a testis or an ovary still remains elusive. In this context the present review is aimed to discuss several theories about the possible role of brain aromatase using fish as models. The relevance of brain aromatase and therefore of neuroestrogens as the possible cue for gonadal differentiation is raised. In addition, the possible role of brain aromatase as the way to keep the high levels of neurogenesis in fish is also considered. Several key examples of how teleosts and aromatase

  2. Pedestrian and motorists' actions at pedestrian hybrid beacon sites: findings from a pilot study.

    Science.gov (United States)

    Pulugurtha, Srinivas S; Self, Debbie R

    2015-01-01

    This paper focuses on an analysis of pedestrian and motorists' actions at sites with pedestrian hybrid beacons and assesses their effectiveness in improving the safety of pedestrians. Descriptive and statistical analyses (one-tail two-sample T-test and two-proportion Z-test) were conducted using field data collected during morning and evening peak hours at three study sites in the city of Charlotte, NC, before and after the installation of pedestrian hybrid beacons. Further, an analysis was conducted to assess the change in pedestrian and motorists' actions over time (before the installation; 1 month, 3 months, 6 months, and 12 months after the installation). Results showed an increase in average traffic speed at one of the pedestrian hybrid beacon sites while no specific trends were observed at the other two pedestrian hybrid beacon sites. A decrease in the number of motorists not yielding to pedestrians, pedestrians trapped in the middle of the street, and pedestrian-vehicle conflicts were observed at all the three pedestrian hybrid beacon sites. The installation of pedestrian hybrid beacons did not have a negative effect on pedestrian actions at two out of the three sites. Improvements seem to be relatively more consistent 3 months after the installation of the pedestrian hybrid beacon.

  3. The illusion of specific capture: surface and solution studies of suboptimal oligonucleotide hybridization

    Science.gov (United States)

    2013-01-01

    Background Hybridization based assays and capture systems depend on the specificity of hybridization between a probe and its intended target. A common guideline in the construction of DNA microarrays, for instance, is that avoiding complementary stretches of more than 15 nucleic acids in a 50 or 60-mer probe will eliminate sequence specific cross-hybridization reactions. Here we present a study of the behavior of partially matched oligonucleotide pairs with complementary stretches starting well below this threshold complementarity length – in silico, in solution, and at the microarray surface. The modeled behavior of pairs of oligonucleotide probes and their targets suggests that even a complementary stretch of sequence 12 nt in length would give rise to specific cross-hybridization. We designed a set of binding partners to a 50-mer oligonucleotide containing complementary stretches from 6 nt to 21 nt in length. Results Solution melting experiments demonstrate that stable partial duplexes can form when only 12 bp of complementary sequence are present; surface hybridization experiments confirm that a signal close in magnitude to full-strength signal can be obtained from hybridization of a 12 bp duplex within a 50mer oligonucleotide. Conclusions Microarray and other molecular capture strategies that rely on a 15 nt lower complementarity bound for eliminating specific cross-hybridization may not be sufficiently conservative. PMID:23445545

  4. Respondent driven sampling in a biomonitoring study of refugees from Burma in Buffalo, New York who eat Great Lakes fish.

    Science.gov (United States)

    Liu, Ming; McCann, Molly; Lewis-Michl, Elizabeth; Hwang, Syni-An

    2018-06-01

    Refugees from Burma who consume fish caught from local waterbodies have increased risk of exposure to environmental contaminants. We used respondent driven sampling (RDS) to sample this hard-to-reach population for the first Biomonitoring of Great Lakes Populations program. In the current study, we examined the interview data and assessed the effectiveness of RDS to sample the unique population. In 2013, we used RDS to sample 205 Burmese refugees and immigrants residing in Buffalo, New York who consumed fish caught from Great Lakes waters. RDS-adjusted population estimates of sociodemographic characteristics, residential history, fish consumption related behaviors, and awareness of fish advisories were obtained. We also examined sample homophily and equilibrium to assess how well the RDS assumptions were met in the study. Our sample was diverse with respect to sex, age, years residing in Buffalo, years lived in a refugee camp, education, employment, and fish consumption behaviors, and each of these variables reached equilibrium by the end of recruitment. Burmese refugees in Buffalo consumed Great Lakes fish throughout the year; a majority of them consumed the fish more than two times per week during summer, and about one third ate local fish more than once per week in winter. An estimated 60% of Burmese refugees in Buffalo had heard about local fish advisories. RDS has the potential to be an effective methodology for sampling refugees and immigrants in conducting biomonitoring and environmental exposure assessment. Due to high fish consumption and limited awareness and knowledge of fish advisories, some refugee and immigrant populations are more susceptible to environmental contaminants. Increased awareness on local fish advisories is needed among these populations. Published by Elsevier GmbH.

  5. Hydrodynamic study of freely swimming shark fish propulsion for marine vehicles using 2D particle image velocimetry.

    Science.gov (United States)

    Babu, Mannam Naga Praveen; Mallikarjuna, J M; Krishnankutty, P

    Two-dimensional velocity fields around a freely swimming freshwater black shark fish in longitudinal (XZ) plane and transverse (YZ) plane are measured using digital particle image velocimetry (DPIV). By transferring momentum to the fluid, fishes generate thrust. Thrust is generated not only by its caudal fin, but also using pectoral and anal fins, the contribution of which depends on the fish's morphology and swimming movements. These fins also act as roll and pitch stabilizers for the swimming fish. In this paper, studies are performed on the flow induced by fins of freely swimming undulatory carangiform swimming fish (freshwater black shark, L  = 26 cm) by an experimental hydrodynamic approach based on quantitative flow visualization technique. We used 2D PIV to visualize water flow pattern in the wake of the caudal, pectoral and anal fins of swimming fish at a speed of 0.5-1.5 times of body length per second. The kinematic analysis and pressure distribution of carangiform fish are presented here. The fish body and fin undulations create circular flow patterns (vortices) that travel along with the body waves and change the flow around its tail to increase the swimming efficiency. The wake of different fins of the swimming fish consists of two counter-rotating vortices about the mean path of fish motion. These wakes resemble like reverse von Karman vortex street which is nothing but a thrust-producing wake. The velocity vectors around a C-start (a straight swimming fish bends into C-shape) maneuvering fish are also discussed in this paper. Studying flows around flapping fins will contribute to design of bioinspired propulsors for marine vehicles.

  6. A study of aluminium-exposed fish using a scanning proton microprobe

    Energy Technology Data Exchange (ETDEWEB)

    Cholewa, M; Legge, G L.F. [Melbourne Univ., Parkville, VIC (Australia). School of Physics; Eeckhaoudt, S; Van Grieken, R [Universitaire Instelling Antwerpen, Antwerp (Belgium)

    1994-12-31

    A major problem has arisen in Europe with the depopulation of fresh water fish in lakes and streams collecting acid rain. The sensitivity to acidification is species specific and appears to be associated with metal levels. The Scanning Proton Microprobe (SPMP) at the Micro Analytical Research Centre of the University of Melbourne was used to study the subcellular distribution of aluminium and other elements in the gills of fish exposed to acidified water with elevated Al-levels. Experiments were performed on thin sections taken from fish exposed to media with different pH and aluminium concentration. Aluminium was found on the surface of the gill lamellae, but also inside the tissue. Bulk analysis of the gills showed much higher concentrations in the aluminium-exposed fish, compared to the control ones, but no information regarding the actual accumulation sites can be inferred. Extensive study of damage done to the sample by intense proton beams during elemental analysis was performed with scanning transmission ion microscopy. 3 refs., 3 figs.

  7. A study of aluminium-exposed fish using a scanning proton microprobe

    Energy Technology Data Exchange (ETDEWEB)

    Cholewa, M.; Legge, G.L.F. [Melbourne Univ., Parkville, VIC (Australia). School of Physics; Eeckhaoudt, S.; Van Grieken, R. [Universitaire Instelling Antwerpen, Antwerp (Belgium)

    1993-12-31

    A major problem has arisen in Europe with the depopulation of fresh water fish in lakes and streams collecting acid rain. The sensitivity to acidification is species specific and appears to be associated with metal levels. The Scanning Proton Microprobe (SPMP) at the Micro Analytical Research Centre of the University of Melbourne was used to study the subcellular distribution of aluminium and other elements in the gills of fish exposed to acidified water with elevated Al-levels. Experiments were performed on thin sections taken from fish exposed to media with different pH and aluminium concentration. Aluminium was found on the surface of the gill lamellae, but also inside the tissue. Bulk analysis of the gills showed much higher concentrations in the aluminium-exposed fish, compared to the control ones, but no information regarding the actual accumulation sites can be inferred. Extensive study of damage done to the sample by intense proton beams during elemental analysis was performed with scanning transmission ion microscopy. 3 refs., 3 figs.

  8. A study of aluminium-exposed fish using a scanning proton microprobe

    International Nuclear Information System (INIS)

    Cholewa, M.; Legge, G.L.F.

    1993-01-01

    A major problem has arisen in Europe with the depopulation of fresh water fish in lakes and streams collecting acid rain. The sensitivity to acidification is species specific and appears to be associated with metal levels. The Scanning Proton Microprobe (SPMP) at the Micro Analytical Research Centre of the University of Melbourne was used to study the subcellular distribution of aluminium and other elements in the gills of fish exposed to acidified water with elevated Al-levels. Experiments were performed on thin sections taken from fish exposed to media with different pH and aluminium concentration. Aluminium was found on the surface of the gill lamellae, but also inside the tissue. Bulk analysis of the gills showed much higher concentrations in the aluminium-exposed fish, compared to the control ones, but no information regarding the actual accumulation sites can be inferred. Extensive study of damage done to the sample by intense proton beams during elemental analysis was performed with scanning transmission ion microscopy. 3 refs., 3 figs

  9. Species integrity enhanced by a predation cost to hybrids in the wild

    DEFF Research Database (Denmark)

    Nilsson, P. A.; Hulthén, Kaj; Chapman, Ben B.

    2017-01-01

    Species integrity can be challenged, and even eroded, if closely related species can hybridize and produce fertile offspring of comparable fitness to that of parental species. The maintenance of newly diverged or closely related species therefore hinges on the establishment and effectiveness of pre...... barrier to gene flow in the wild. Cyprinid fishes commonly produce fertile, viable hybrid offspring and therefore make excellent study organisms to investigate ecological costs to hybrids. We electronically tagged two freshwater cyprinid fish species (roach Rutilus rutilus and bream Abramis brama...... to directly test for a predation cost to hybrids in the wild. Hybrid individuals were found significantly more susceptible to cormorant predation than individuals from either parental species. Such ecological selection against hybrids contributes to species integrity, and can enhance species diversification....

  10. Social Structure Study of Association The Flying Fish Fishermen in Takalar Regency (Case Study in Bontomarannu Village, South Galesong District

    Directory of Open Access Journals (Sweden)

    Muhammad Dalvi Mustafa

    2017-11-01

    Full Text Available This study aims to determined (1 the form of social structure that occur in groups of flying fish fishermen and (2 the rights and duties between the punggawa and sawi inside the social structure in flying fish fisher groups at Bontomarannu Village of South Galesong District, Takalar. The basic method of this research was descriptive method with qualitative approach, while the strategy was a case study. The research was conducted in the Bontomarannu Villages District of South Galesong as one of the flying fish fisher group who still use the traditional way. Determination of informants conducted snowball sampling where there were 35 informants were used in this study. The results showed that the shape of the social structure of the punggawa sawi in a group of flying fish fisher form of domination and legitimacy of the role played by the punggawa being the highest position in the social relations. The strength of the social structure between the punggawa and sawi belong to the powerful force that created rights and duties of each role and status they have in the flying fish fisher groups. Rights and duties were not only applicable in the employment relationship alone, but more deeply into the journey of life both within the coastal communities in the Bontomarannu Village. Keywords : punggawa, sawi, social structure, Takalar

  11. Methodological issues affecting the study of fish parasites. I. Duration of live fish storage prior to dissection

    Czech Academy of Sciences Publication Activity Database

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2016-01-01

    Roč. 119, č. 2 (2016), s. 107-115 ISSN 0177-5103 R&D Projects: GA ČR GBP505/12/G112 Institutional support: RVO:68081766 Keywords : Parasite community * Temporal changes * Carassius gibelio * Fish holding * Methodology * Parasitological examination Subject RIV: EG - Zoology Impact factor: 1.549, year: 2016

  12. Does herbivorous fish protection really improve coral reef resilience? A case study from new caledonia (South Pacific).

    Science.gov (United States)

    Carassou, Laure; Léopold, Marc; Guillemot, Nicolas; Wantiez, Laurent; Kulbicki, Michel

    2013-01-01

    Parts of coral reefs from New Caledonia (South Pacific) were registered at the UNESCO World Heritage list in 2008. Management strategies aiming at preserving the exceptional ecological value of these reefs in the context of climate change are currently being considered. This study evaluates the appropriateness of an exclusive fishing ban of herbivorous fish as a strategy to enhance coral reef resilience to hurricanes and bleaching in the UNESCO-registered areas of New Caledonia. A two-phase approach was developed: 1) coral, macroalgal, and herbivorous fish communities were examined in four biotopes from 14 reefs submitted to different fishing pressures in New Caledonia, and 2) results from these analyses were challenged in the context of a global synthesis of the relationship between herbivorous fish protection, coral recovery and relative macroalgal development after hurricanes and bleaching. Analyses of New Caledonia data indicated that 1) current fishing pressure only slightly affected herbivorous fish communities in the country, and 2) coral and macroalgal covers remained unrelated, and macroalgal cover was not related to the biomass, density or diversity of macroalgae feeders, whatever the biotope or level of fishing pressure considered. At a global scale, we found no relationship between reef protection status, coral recovery and relative macroalgal development after major climatic events. These results suggest that an exclusive protection of herbivorous fish in New Caledonia is unlikely to improve coral reef resilience to large-scale climatic disturbances, especially in the lightly fished UNESCO-registered areas. More efforts towards the survey and regulation of major chronic stress factors such as mining are rather recommended. In the most heavily fished areas of the country, carnivorous fish and large targeted herbivores may however be monitored as part of a precautionary approach.

  13. BIOTECHNOLOGY OF THE FISH AQUACULTURE

    Directory of Open Access Journals (Sweden)

    L. P. Buchatsky

    2013-12-01

    Full Text Available The latest progress in biotechnology on fish aquaculture and different modern methods of investigations for increasing of fish productivity in aquaculture are analyzed. Except for the applied aspect, the use of modern biotechnological methods of investigations opens new possibilities for fundamental researches of sex-determining mechanisms, polyploidy, distant hybridization, and developmental biology of bony fishes. Review contains examples of utilizing modern biotechnology methods to obtain transgenic fishes with accelerated growth and for designing surrogate fishes. Methods for receiving unisexual shoals of salmon and sturgeon female fishes with the view of obtaining a large quantity of caviar, as well as receiving sterile (triploid fishes are analyzed. Great attention is given to androgenesis, particularly to disperm one, in connection with the problem of conserving rare and vanishing fish species using only sperm genetic material. Examples how distant hybrids may be obtained with the use of disperm androgenesis and alkylated DNA are given. Methods of obtaining fish primordium germ cells, recent developments in cultivation of fish stem cells and their use in biotechnology, as well as ones of transplantation of oogonium and spermatogonium to obtain surrogate fishes. The examples of successful experiments on spermatogonial xenotransplantation and characteristic of antifreezing fish proteins and also the prospect of their practical usage are given.

  14. Study of the Antimicrobial Activity of Tilapia Piscidin 3 (TP3) and TP4 and Their Effects on Immune Functions in Hybrid Tilapia (Oreochromis spp.)

    Science.gov (United States)

    Pan, Chieh-Yu; Tsai, Tsung-Yu; Su, Bor-Chyuan; Hui, Cho-Fat; Chen, Jyh-Yih

    2017-01-01

    To address the growing concern over antibiotic-resistant microbial infections in aquatic animals, we tested several promising alternative agents that have emerged as new drug candidates. Specifically, the tilapia piscidins are a group of peptides that possess antimicrobial, wound-healing, and antitumor functions. In this study, we focused on tilapia piscidin 3 (TP3) and TP4, which are peptides derived from Oreochromis niloticus, and investigated their inhibition of acute bacterial infections by infecting hybrid tilapia (Oreochromis spp.) with Vibrio vulnificus and evaluating the protective effects of pre-treating, co-treating, and post-treating fish with TP3 and TP4. In vivo experiments showed that co-treatment with V. vulnificus and TP3 (20 μg/fish) or TP4 (20 μg/fish) achieved 95.3% and 88.9% survival rates, respectively, after seven days. When we co-injected TP3 or TP4 and V. vulnificus into tilapia and then re-challenged the fish with V. vulnificus after 28 days, the tilapia exhibited survival rates of 35.6% and 42.2%, respectively. Pre-treatment with TP3 (30 μg/fish) or TP4 (20 μg/fish) for 30 minutes prior to V. vulnificus infection resulted in high survival rates of 28.9% and 37.8%, respectively, while post-treatment with TP3 (20 μg/fish or 30 μg/fish) or TP4 (20 μg/fish) 30 minutes after V. vulnificus infection yielded high survival rates of 33.3% and 48.9%. In summary, pre-treating, co-treating, and post-treating fish with TP3 or TP4 all effectively decreased the number of V. vulnificus bacteria and promoted significantly lower mortality rates in tilapia. The minimum inhibitory concentrations (MICs) of TP3 and TP4 that were effective for treating fish infected with V. vulnificus were 7.8 and 62.5 μg/ml, respectively, whereas the MICs of kanamycin and ampicillin were 31.2 and 3.91 μg/ml. The antimicrobial activity of these peptides was confirmed by transmission electron microscopy (TEM) and scanning electron microscopy (SEM), both of which showed

  15. Coalbed gas environmental resource information project : fish population and habitat study review : Similkameen and Tulameen coalfields : final report

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2006-03-15

    This paper provided an overview of fish and fish habitats in the Similkameen and Tulameen coalfields area. The report consisted of a literature review as well as the examination of a regional-specific database. Discussions and interviews were conducted with First Nations, members of the oil and gas industry, and various governmental and non-governmental organizations. The report identified fish species in the region, and provided details of fish distribution and habitat, and obstructions and constraints to fish populations. Information on sensitive species was also provided. Watershed and hydrological overviews were provided, as well as summary tables for all relevant data. Online mapping and resource databases were used to prepare a profile of fish and fish habitat studies. Sensitive species information was obtained from online governmental mapping resources. The acquired data were then used to produce resource lists and habitat tables for streams and rivers residing within or transiting through the area. Four fish species were identified as species at risk, and an additional fish species was considered to be endangered. It was concluded that a centralized and mandatory reporting system must be developed to ensure that all documents are deposited within a single central library. Approximately 80 per cent of the information gathered for the report did not exist in the Environmental Resources Information Project (ERIP) database. 16 refs., 11 tabs., 1 fig.

  16. DNA:DNA hybridization studies on the pink-pigmented facultative methylotrophs.

    Science.gov (United States)

    Hood, D W; Dow, C S; Green, P N

    1987-03-01

    The genomic relatedness among 36 strains of pink-pigmented facultatively methylotrophic bacteria (PPFMs) was estimated by determination of DNA base composition and by DNA:DNA hybridization studies. A reproducible hybridization system was developed for the rapid analysis of multiple DNA samples. Results indicated that the PPFMs comprise four major and several minor homology groups, and that they should remain grouped in a single genus, Methylobacterium.

  17. A Study of Ion-Ion Hybrid Instability in the Mixed Plasma

    Directory of Open Access Journals (Sweden)

    Soo-Yong Kim

    1987-12-01

    Full Text Available There are more oxygen ions than hydrogen ions in the auroral field zone. We consider both analytic and numerical simulation study of the heating of hydrogen and oxygen ions by auroral electrons. With the low drift speed of electron beams, the ion-ion hybrid wave becomes unstable instead of the lower hybrid wave so that a preferential heating of oxygen ions occurs.

  18. Studies on the Utilization of Deboned Trout (Oncorhynchus mykiss) Frames in Fish Snack

    OpenAIRE

    Muralidharan, S.

    1999-01-01

    Snack food development studies were conducted to iii utilize trout (Oncorhynchus mykiss) frames, a by-product of the filleting operation, using extrusion and conventional technology. Twin screw extrusion studies were conducted to study the effect of fish mince, non-fat dry milk, process temperature, and moisture content on the physicochemical properties of the extruded snack food. Response surfaces were plotted to understand the effects of the independent variables on dependent variables such...

  19. Adoption Of Improved Fish Technologies Among Fish Farmers In ...

    African Journals Online (AJOL)

    A shortfall exists between fish supply and fish demand in the country despite the introduction of improved technology to fish farmers. This led to huge wage bill on the importation of fish to meet the protein need of the ever increasing population. This prompted this study with focus on adoption of improved fish technologies ...

  20. A study of the fish community structure in a tidal creek.

    Science.gov (United States)

    Spach, H L; Santos, C; Godefroid, R S; Nardi, M; Cunha, F

    2004-05-01

    The fish assemblage in a mangrove tidal creek was studied in monthly collections between August 1998 and July 1999 in the quadrature low tide and high tide, using a fyke net of 30 m x 1.5 m and meshes of 8 and 10 mm. Simultaneously with the biological collections, temperature, salinity, pH, water transparency, and current speed data were obtained. The collections resulted in the capture of 36,873 fish representing 22 families and 52 species. Immature individuals abounded (63.8%), and among the adult specimens there was a larger number of females. The species Anchoa parva, Harengula clupeola, Genidens genidens, and Bairdiella ronchus, contributed to 84.9% of the total capture of fish, however the contribution in mass was of 55.2%, indicating a predominance of small individuals. A smaller number of fish and species seem to occupy the area in the period between August and December, in comparison to the period between February and July, when the larger aggregations appear, mainly of the species Anchoa parva, Harengula clupeola, Opisthonema oglinum, Genidens genidens, Diapterus rhombeus, and Bairdiella ronchus. The environmental factors, pH, water transparency, and rainfall seem to have an influence in the structure of the observed biological patterns.

  1. Wholesomeness studies on gamma-irradiated smoked fish using short-term mutagenicity assays

    International Nuclear Information System (INIS)

    De la Rosa, A.M.; Banzon, R.B.

    1985-12-01

    The effect of gamma irradiation on the mutagenicity potential of wood-smoked mackerel (Rastrelliger sp.) was investigated. Smoked fish were irradiated with dose of 2.0, 4.0, 6.0 and 8.0 KGy, and tested for mutagenic activity using the Salmonella plate incorporation assay, host-mediated assay, and micronucleus test. The DMSO extract of unirradiated smoked fish was found to be mutagenic, without metabolic activation in Salmonella strains TA 100 and TA 104, both sensitive to base-pair substitution mutations. Strains TA 98 and TA 97 which are sensitive to frameshift mutations showed no mutagenic activity towards the same DMSO extract. The observed response towards the Salmonella strains was not affected by irradiation in the range of radiation doses studied. The presence of protamutagens in the DMSO extract of unirradiated smoked fish was not detected using the host-mediated assay. In another in-vivo test however, the same DMSO extract induced the formation of micronuclei in the bonemarrow cells of mice. Gamma irradiation up to a dose of 8.0 KGy did not affect the observed mutagenicity of wood-smoked fish. (author)

  2. Energy profiling of demersal fish: a case-study in wind farm artificial reefs.

    Science.gov (United States)

    De Troch, Marleen; Reubens, Jan T; Heirman, Elke; Degraer, Steven; Vincx, Magda

    2013-12-01

    The construction of wind farms introduces artificial hard substrates in sandy sediments. As Atlantic cod (Gadus morhua) and pouting (Trisopterus luscus) tend to aggregate in order to feed around these reefs, energy profiling and trophic markers were applied to study their feeding ecology in a wind farm in the Belgian part of the North Sea. The proximate composition (carbohydrates, proteins and lipids) differed significantly between liver and muscle tissue but not between fish species or between their potential prey species. Atlantic cod showed to consume more energy than pouting. The latter had a higher overall energy reserve and can theoretically survive twice as long on the available energy than cod. In autumn, both fish species could survive longer on their energy than in spring. Polyunsaturated fatty acids were found in high concentrations in fish liver. The prey species Jassa and Pisidia were both rich in EPA while Jassa had a higher DHA content than Pisidia. Energy profiling supported the statement that wind farm artificial reefs are suitable feeding ground for both fish species. Sufficient energy levels were recorded and there is no indication of competition.

  3. Study of Hybrid Localization Noncooperative Scheme in Wireless Sensor Network

    Directory of Open Access Journals (Sweden)

    Irfan Dwiguna Sumitra

    2017-01-01

    Full Text Available In this paper, we evaluated the experiment and analysis measurement accuracy to determine object location based on wireless sensor network (WSN. The algorithm estimates the position of sensor nodes employing received signal strength (RSS from scattered nodes in the environment, in particular for the indoor building. Besides that, we considered another algorithm based on weight centroid localization (WCL. In particular testbed, we combined both RSS and WCL as hybrid localization in case of noncooperative scheme with considering that source nodes directly communicate only with anchor nodes. Our experimental result shows localization accuracy of more than 90% and obtained the estimation error reduction to 4% compared to existing algorithms.

  4. Comparison study of hybrid VS critical systems in point kinetics

    International Nuclear Information System (INIS)

    Ritter, G.; Tommasi, J.; Slessarev, L.; Salvatores, M.; Mouney, H.; Vergnes, J.

    1999-01-01

    An essential motivation for hybrid systems is a potentially high level of intrinsic safety against reactivity accidents. In this respect, it is necessary to assess the behaviour of an Accelerator Driven System during a TOP, LOF or TOC accident. A comparison between a critical and sub-critical reactor shows a larger sensitivity for the critical system. The ADS has an unquestionable advantage in case of TOP but a less favourable behaviour as for LOFWS type of accidents. However in the ADS cases, the beam could be easily shut off during the transient. Therefore, a part of the R and D effort should be focused on the monitoring and control of power. (author)

  5. An hybrid and non-modern approach to urban studies

    Directory of Open Access Journals (Sweden)

    Marc Grau i Solés

    2012-03-01

    Full Text Available This article draws upon the so-called Forat de la Vergonya urban controversy and the urban transformation process of a neighborhood in Barcelona: el Casc Antic. Drawing on inputs from Actor-Network Theory (ANT, the city is explored as a multiple urban assemblage. Besides, we analyze the dichotomous nature of the modern notion of politics. Especially, the role of object-subject dichotomy is explored. Through the analysis of citizen participation opportunities we propose a new hybrid notion of citizen participation and urban policy.

  6. Maternal Fish Consumption and Infant Birth Size and Gestation: New York State Angler Cohort Study

    Directory of Open Access Journals (Sweden)

    Weiner John M

    2003-06-01

    Full Text Available Abstract Background The scientific literature poses a perplexing dilemma for pregnant women with respect to the consumption of fish from natural bodies of water. On one hand, fish is a good source of protein, low in fat and a rich source of other nutrients all of which have presumably beneficial effects on developing embryos and fetuses. On the other hand, consumption of fish contaminated with environmental toxicants such as polychlorinated biphenyls (PCBs has been associated with decrements in gestation and birth size. Methods 2,716 infants born between 1986–1991 to participants of the New York State Angler Cohort Study were studied with respect to duration of maternal consumption of contaminated fish from Lake Ontario and its tributaries and gestation and birth size. Hospital delivery records (maternal and newborn were obtained for 92% of infants for the ascertainment of gestation (weeks, birth size (weight, length, chest, and head circumference and other known determinants of fetal growth (i.e., maternal parity, history of placental infarction, uterine bleeding, pregnancy loss or cigarette smoking and infant's race, sex and presence of birth defect. Duration of maternal fish consumption prior to the index infant's birth was categorized as: none; 1–2, 3–7, 8+ years, while birth weight (in grams, birth length (in centimeters, and head and chest circumference (in centimeters were left as continuous variables in multiple linear regression models. Birth size percentiles, ponderal indices and head to chest circumference ratios were computed to further assess proportionality and birth size in relation to gestational age. Results Analysis of variance failed to identify significant mean differences in gestation or any measure of birth size in relation to duration of maternal lifetime fish consumption. Multiple linear regressions identified gestational age, male sex, number of daily cigarettes, parity and placental infarction, as significant

  7. A study on optimization of hybrid drive train using Advanced Vehicle Simulator (ADVISOR)

    Energy Technology Data Exchange (ETDEWEB)

    Same, Adam; Stipe, Alex; Grossman, David; Park, Jae Wan [Department of Mechanical and Aeronautical Engineering, University of California, Davis, One Shields Ave, Davis, CA 95616 (United States)

    2010-10-01

    This study investigates the advantages and disadvantages of three hybrid drive train configurations: series, parallel, and ''through-the-ground'' parallel. Power flow simulations are conducted with the MATLAB/Simulink-based software ADVISOR. These simulations are then applied in an application for the UC Davis SAE Formula Hybrid vehicle. ADVISOR performs simulation calculations for vehicle position using a combined backward/forward method. These simulations are used to study how efficiency and agility are affected by the motor, fuel converter, and hybrid configuration. Three different vehicle models are developed to optimize the drive train of a vehicle for three stages of the SAE Formula Hybrid competition: autocross, endurance, and acceleration. Input cycles are created based on rough estimates of track geometry. The output from these ADVISOR simulations is a series of plots of velocity profile and energy storage State of Charge that provide a good estimate of how the Formula Hybrid vehicle will perform on the given course. The most noticeable discrepancy between the input cycle and the actual velocity profile of the vehicle occurs during deceleration. A weighted ranking system is developed to organize the simulation results and to determine the best drive train configuration for the Formula Hybrid vehicle. Results show that the through-the-ground parallel configuration with front-mounted motors achieves an optimal balance of efficiency, simplicity, and cost. ADVISOR is proven to be a useful tool for vehicle power train design for the SAE Formula Hybrid competition. This vehicle model based on ADVISOR simulation is applicable to various studies concerning performance and efficiency of hybrid drive trains. (author)

  8. Clinical consequences of using PNA-FISH in Staphylococcal bacteraemia

    DEFF Research Database (Denmark)

    Laub, R R; Knudsen, Inge Jenny Dahl

    2014-01-01

    To optimize patient treatment and rational use of antimicrobials, it is important to provide fast information on findings in blood-cultures (BCs). The purpose of this study was to evaluate the impact of using peptide nucleic acid fluorescence in situ hybridization (PNA-FISH) on positive BCs conta...

  9. Multiway study of hybridization in nanoscale semiconductor labeled DNA based on fluorescence resonance energy transfer

    DEFF Research Database (Denmark)

    Gholami, Somayeh; Kompany Zare, Mohsen

    2013-01-01

    donor-QD acceptor) upon hybridization with a label free target was monitored by two-dimensional photoluminescence excitation spectroscopy (2D-PLE). Detection of a target oligonucleotide strand, using sandwiched nanoassembly in a separation-free format, was performed with the appearance of a new feature...... and model based analysis of 2D-PLE data was implemented by means of PAR-AFAC and hard trilinear decomposition (HTD), allowing to fit a proper model for FRET-based sandwich DNA hybridization systems. This study is the first successful application of a multiway chemometric technique to consider FRET based DNA...... hybridization in sandwiched nanoassemblies. A multi-equilibria model was properly fitted to the data and confirmed there is a competition between ternary and binary complex formation. Equilibrium constants of DNA hybridization in sandwiched nanoassemblies were estimated for the first time. Equilibrium constants...

  10. Injury and time studies of working processes in fishing

    DEFF Research Database (Denmark)

    Jensen, Olaf Chresten

    2006-01-01

    of the present study was to relate the length of the working time to the number of injuries for the speciWc working processes in Wshing. Time measurements were performed during participation in Wshing trips with four diVerent kinds of vessels. Risk index numbers for the speciWc working processes were calculated......Epidemiological studies of occupational injury document the incidence rates of the main structures as type of workplace and the work departments. The work processes within the departments represent an internal structure where the injury rates have not been given much attention before. The purpose...... by dividing the number of injuries within a 5-year period with the total sum of minutes used for each working process as measured during one Wshing trip for each type of Wshing. The highest risk index numbers were found for embarking and disembarking the vessel, which only takes a minimum of time...

  11. Beaufort Sea Coastal Fish Studies Overview and Bibliography

    Science.gov (United States)

    1993-06-01

    from the mainland of Cahn, A.R. (1936) Observations on the breeding of the British Columbia. Journal of the Fisheries Research lawyer, Lota maculosa ... maculosa (LeSueur) in Lake Erie. Transactions of the Hoop traps as a means to capture burbot. North Ameri- American Fisheries Society, 80: 56-66. can...Iota maculosa (LeSueur) in Lake Erie. Transactions of imental study of the ling, Lota maculosa (LeSueur), in the American Fisheries Society. 80:163

  12. Transposable elements in fish chromosomes: a study in the marine cobia species.

    Science.gov (United States)

    Costa, G W W F; Cioffi, M B; Bertollo, L A C; Molina, W F

    2013-01-01

    Rachycentron canadum, a unique representative of the Rachycentridae family, has been the subject of considerable biotechnological interest due to its potential use in marine fish farming. This species has undergone extensive research concerning the location of genes and multigene families on its chromosomes. Although most of the genome of some organisms is composed of repeated DNA sequences, aspects of the origin and dispersion of these elements are still largely unknown. The physical mapping of repetitive sequences on the chromosomes of R. canadum proved to be relevant for evolutionary and applied purposes. Therefore, here, we present the mapping by fluorescence in situ hybridization of the transposable element (TE) Tol2, the non-LTR retrotransposons Rex1 and Rex3, together with the 18S and 5S rRNA genes in the chromosome of this species. The Tol2 TE, belonging to the family of hAT transposons, is homogeneously distributed in the euchromatic regions of the chromosomes but with huge colocalization with the 18S rDNA sites. The hybridization signals for Rex1 and Rex3 revealed a semi-arbitrary distribution pattern, presenting differentiated dispersion in euchromatic and heterochromatic regions. Rex1 elements are associated preferentially in heterochromatic regions, while Rex3 shows a scarce distribution in the euchromatic regions of the chromosomes. The colocalization of TEs with 18S and 5S rDNA revealed complex chromosomal regions of repetitive sequences. In addition, the nonpreferential distribution of Rex1 and Rex3 in all heterochromatic regions, as well as the preferential distribution of the Tol2 transposon associated with 18S rDNA sequences, reveals a distinct pattern of organization of TEs in the genome of this species. A heterogeneous chromosomal colonization of TEs may confer different evolutionary rates to the heterochromatic regions of this species.

  13. Ciguatera fish poisoning in la Habana, Cuba: a study of local social-ecological resilience.

    Science.gov (United States)

    Morrison, Karen; Aguiar Prieto, Pablo; Castro Domínguez, Arnaldo; Waltner-Toews, David; Fitzgibbon, John

    2008-09-01

    Following the collapse of the Cuban economy in the early 1990s, epidemiologists in the Cuban Ministry of Health noticed dramatic increases in reported outbreaks of ciguatera fish poisoning (CFP) in some coastal communities. This article summarizes the results of a comparative case study which applied an ecosystem approach to human health to investigate this issue. Situated learning and complexity theories were used to interpret the results of the investigation. CFP outbreaks are influenced by a complex set of interactions between ecological and socioeconomic processes. This study found that the level of organization of the local sports fishing community and the degree of degradation of the local nearshore marine ecosystem appear to be key factors influencing the diverging levels of CFP outbreaks recorded in the 1990s in the communities studied.

  14. A randomised study on the effects of fish protein supplement on glucose tolerance, lipids and body composition in overweight adults.

    Science.gov (United States)

    Vikøren, Linn A; Nygård, Ottar K; Lied, Einar; Rostrup, Espen; Gudbrandsen, Oddrun A

    2013-02-28

    The popularity of high-protein diets for weight reduction is immense. However, the potential benefits from altering the source of dietary protein rather than the amount is scarcely investigated. In the present study, we examined the effects of fish protein supplement on glucose and lipid metabolism in overweight adults. A total of thirty-four overweight adults were randomised to 8 weeks' supplementation with fish protein or placebo tablets (controls). The intake of fish protein supplement was 3 g/d for the first 4 weeks and 6 g/d for the last 4 weeks. In this study, 8 weeks of fish protein supplementation resulted in lower values of fasting glucose (Pfish protein supplementation compared to controls. Glucose-AUC was decreased after 8 weeks with fish protein supplement compared to baseline (Pfish protein may have beneficial effects on blood levels of glucose and LDL-cholesterol as well as glucose tolerance and body composition in overweight adults. The long-term effects of fish protein supplementation is of interest in the context of using more fish as a protein source in the diet, and the effects of inclusion of fish in the diet of individuals with low glucose tolerance should be evaluated.

  15. Effects of Hybrid Coat on shear bond strength of five cements: an in vitro study.

    Science.gov (United States)

    Guo, Yue; Zhou, Hou-De; Feng, Yun-Zhi

    2017-12-01

    To evaluate the sealing performance of Hybrid Coat and its influence on the shear bond strength of five dentin surface cements. Six premolars were pretreated to expose the dentin surface prior to the application of Hybrid Coat. The microscopic characteristics of the dentinal surfaces were examined with scanning electron microscopy (SEM). Then, 40 premolars were sectioned longitudinally, and 80 semi-sections were divided into a control group (untreated) and a study group (treated by Hybrid Coat). Alloy restoration was bonded to the teeth specimen using five different cements. Shear bond strength was measured by the universal testing machine. The fracture patterns and the adhesive interface were observed using astereomicroscope. SEM revealed that the lumens of dentinal tubules were completely occluded by Hybrid Coat. The Hybrid Coat significantly improved the shear bond strength of resin-modified glass ionomer cement (RMGIC) and resin cement (RC) but weakened the performance of zinc phosphate cement (ZPC), zinc polycarboxylate cement (ZPCC) and glass ionomer cement (GIC). Hybrid Coat is an effective dentinal tubule sealant, and therefore its combined use with resin or resin-modified glass ionomer cements can be applied for the prostheses attachment purpose.

  16. Combined cycle solar central receiver hybrid power system study. Final technical report. Volume II

    Energy Technology Data Exchange (ETDEWEB)

    None

    1979-11-01

    This study develops the conceptual design for a commercial-scale (nominal 100 MWe) central receiver solar/fossil fuel hybrid power system with combined cycle energy conversion. A near-term, metallic heat pipe receiver and an advanced ceramic tube receiver hybrid system are defined through parametric and market potential analyses. Comparative evaluations of the cost of power generation, the fuel displacement potential, and the technological readiness of these two systems indicate that the near-term hybrid system has better potential for commercialization by 1990. Based on the assessment of the conceptual design, major cost and performance improvements are projected for the near-term system. Constraints preventing wide-spread use were not identified. Energy storage is not required for this system and analyses show no economic advantages with energy storage provisions. It is concluded that the solar hybrid system is a cost effective alternative to conventional gas turbines and combined cycle generating plants, and has potential for intermediate-load market penetration at 15% annual fuel escalation rate. Due to their flexibility, simple solar/nonsolar interfacing, and short startup cycles, these hybrid plants have significant operating advantages. Utility company comments suggest that hybrid power systems will precede stand-alone solar plants.

  17. Studying the mechanism of hybrid nanoparticle EUV photoresists

    KAUST Repository

    Zhang, Ben

    2015-03-23

    This work focuses on the investigation of dual tone patterning mechanism with hybrid inorganic/organic photoresists. Hafnium oxide (HfO2) modified with acrylic acid was prepared and the influence of electrolyte solutions as well as pH on its particle size change was investigated. The average particle size and zeta potential of the nanoparticles in different electrolyte solutions were measured. The results show that addition of different concentrations of electrolytes changed the hydrodynamic diameter of nanoparticles in water. Increased concentration of tetramethyl ammonium hydroxide (TMAH) caused the zeta potential of nanoparticles to change from positive to negative and its hydrodynamic diameter to increase from 40 nm to 165 nm. In addition, increasing concentration of triflic acid led to the decrease of particle size and zeta potential. © (2015) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.

  18. Studying the mechanism of hybrid nanoparticle EUV photoresists

    KAUST Repository

    Zhang, Ben; Li, Li; Jiang, Jing; Neisser, Mark; Chun, Jun Sung; Ober, Christopher K.; Giannelis, Emmanuel P.

    2015-01-01

    This work focuses on the investigation of dual tone patterning mechanism with hybrid inorganic/organic photoresists. Hafnium oxide (HfO2) modified with acrylic acid was prepared and the influence of electrolyte solutions as well as pH on its particle size change was investigated. The average particle size and zeta potential of the nanoparticles in different electrolyte solutions were measured. The results show that addition of different concentrations of electrolytes changed the hydrodynamic diameter of nanoparticles in water. Increased concentration of tetramethyl ammonium hydroxide (TMAH) caused the zeta potential of nanoparticles to change from positive to negative and its hydrodynamic diameter to increase from 40 nm to 165 nm. In addition, increasing concentration of triflic acid led to the decrease of particle size and zeta potential. © (2015) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.

  19. The experimental studies of 137Cs elimination process from the organism of fish

    International Nuclear Information System (INIS)

    Volkova, O.M.; Belyajev, V.V.; Potrokhov, O.S.

    2003-01-01

    The influence of the ration of a feeding of fishes on the process of 137 Cs elimination from the organism was investigated. The inverse dependence between the mass of fishes and specific activity 137 Cs was found. The rations of the feeding of fishes make possible to lower the specific activity of fishes to the recommended level was determined

  20. Injury risk at the work processes in fishing: a case-referent study

    DEFF Research Database (Denmark)

    Jensen, Olaf C

    2006-01-01

    Epidemiological studies on occupational injuries describe the incidence ratios related to the main strata in the industries, while the injury incidence ratios for the specific work processes within the work places have not yet been studied. The aim was to estimate the injury rate......-ratios for the main work processes in commercial fishing. A case-referent design with samples of person-time was used. The reported injuries to the National Maritime Authorities for a 5-year period for four types of commercial fishing defined the cases. The odds for the referents were calculated from samples...... of person-times for the specific working processes. Odds Ratios (OR) and 95% confidence intervals (95% CI) were calculated for the specific working processes. A total of 560 cases were included and the samples of referent working periods were 63110 min in total. The largest part of the injuries (n = 318...

  1. Studies on optimum harvest time for hybrid rice seed.

    Science.gov (United States)

    Fu, Hong; Cao, Dong-Dong; Hu, Wei-Min; Guan, Ya-Jing; Fu, Yu-Ying; Fang, Yong-Feng; Hu, Jin

    2017-03-01

    Timely harvest is critical for hybrid rice to achieve maximum seed viability, vigor and yield. However, how to predict the optimum harvest time has been rarely reported so far. The seed vigor of Zhuliangyou 06 (ZLY06) increased and reached the highest level at 20 days after pollination (DAP), when seed moisture content had a lower value, which was maintained until final seed maturation. For Chunyou 84 (CY84), seed vigor, fresh and dry weight had relatively high values at 25 DAP, when seed moisture content reached the lowest value and changed slightly from 25 to 55 DAP. In both hybrid rice varieties, seed glume chlorophyll content declined rapidly from 10 to 30 DAP and remained at a very low level after 35 DAP. Starch content exhibited an increasing trend during seed maturation, while both soluble sugar content and amylase activity decreased significantly at the early stages of seed development. Moreover, correlation analyses showed that seed dry weight, starch content and superoxide dismutase activity were significantly positively correlated with seed vigor. In contrast, chlorophyll content, moisture content, soluble sugar, soluble protein, abscisic acid, gibberellin content, electrical conductivity, catalase and ascorbate peroxidase activities were significantly negatively correlated with seed vigor. Physiological and biochemical parameters were obviously more closely related with seed vigor than with seed germinability during seed development. Seed vigor could be better used as a comprehensive factor to predict the optimum seed harvest time. It is suggested that for ZLY06 seeds could be harvested as early as 20 DAP, whereas for CY84 the earliest optimum harvest time was 25 DAP. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  2. A study on the levels of radioactivity in fish samples from the experimental lakes area in Ontario, Canada

    International Nuclear Information System (INIS)

    Chen, Jing; Rennie, Michael D.; Sadi, Baki; Zhang, Weihua; St-Amant, Nadereh

    2016-01-01

    To better understand background radiation levels in country foods, a total of 125 fish samples were collected from three lakes (Lake 226, Lake 302 and Lake 305) in the Experimental Lakes Area (ELA) in Ontario of Canada during the summer of 2014. Concentrations of naturally occurring radionuclides ("2"2"6Ra, "2"1"0Pb and "2"1"0Po) as well as anthropogenic radionuclides ("1"3"4Cs and "1"3"7Cs) were measured. This study confirmed that "2"1"0Po is the dominant contributor to radiation doses resulting from fish consumption. While concentrations of "2"1"0Pb and "2"2"6Ra were below conventional detection limits, "2"1"0Po was measured in almost all fish samples collected from the ELA. The average concentration was about 1.5 Bq/kg fresh weight (fw). None of the fish samples analysed in this study contained any detectable levels of "1"3"4Cs. An average "1"3"7Cs level of 6.1 Bq/kg fw was observed in freshwater fishes harvested in the ELA, almost twice that of samples measured in the National Capital Region of Canada in 2014 and more than 20 times higher than the levels observed in marine fish harvested from the Canadian west coast in 2013 and 2014. However, it is important to note that the concentrations of "1"3"7Cs in fish samples from these inland lakes are considered very low from a radiological protection perspective. The resulting radiation dose for people from fish consumption would be a very small fraction of the annual dose from exposure to natural background radiation in Canada. The results indicate that fishes from inland lakes do not pose a radiological health concern. - Highlights: • "2"1"0Po is the dominant radionuclide measured in a total of 125 fish samples. The average activity concentration was 1.5 Bq/kg fresh weight (fw). • Activity concentration of "2"1"0Po in fish showed a negative dependency on fish size. • While an average "1"3"7Cs level of 6.1 Bq/kg fw was observed, none of the fish samples analysed in this study contained any detectable

  3. Parametric study of the swimming performance of a fish robot propelled by a flexible caudal fin

    Energy Technology Data Exchange (ETDEWEB)

    Low, K H; Chong, C W, E-mail: mkhlow@ntu.edu.s, E-mail: ch0018ee@ntu.edu.s [School of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore 639798 (Singapore)

    2010-12-15

    In this paper, we aim to study the swimming performance of fish robots by using a statistical approach. A fish robot employing a carangiform swimming mode had been used as an experimental platform for the performance study. The experiments conducted aim to investigate the effect of various design parameters on the thrust capability of the fish robot with a flexible caudal fin. The controllable parameters associated with the fin include frequency, amplitude of oscillation, aspect ratio and the rigidity of the caudal fin. The significance of these parameters was determined in the first set of experiments by using a statistical approach. A more detailed parametric experimental study was then conducted with only those significant parameters. As a result, the parametric study could be completed with a reduced number of experiments and time spent. With the obtained experimental result, we were able to understand the relationship between various parameters and a possible adjustment of parameters to obtain a higher thrust. The proposed statistical method for experimentation provides an objective and thorough analysis of the effects of individual or combinations of parameters on the swimming performance. Such an efficient experimental design helps to optimize the process and determine factors that influence variability.

  4. Parametric study of the swimming performance of a fish robot propelled by a flexible caudal fin.

    Science.gov (United States)

    Low, K H; Chong, C W

    2010-12-01

    In this paper, we aim to study the swimming performance of fish robots by using a statistical approach. A fish robot employing a carangiform swimming mode had been used as an experimental platform for the performance study. The experiments conducted aim to investigate the effect of various design parameters on the thrust capability of the fish robot with a flexible caudal fin. The controllable parameters associated with the fin include frequency, amplitude of oscillation, aspect ratio and the rigidity of the caudal fin. The significance of these parameters was determined in the first set of experiments by using a statistical approach. A more detailed parametric experimental study was then conducted with only those significant parameters. As a result, the parametric study could be completed with a reduced number of experiments and time spent. With the obtained experimental result, we were able to understand the relationship between various parameters and a possible adjustment of parameters to obtain a higher thrust. The proposed statistical method for experimentation provides an objective and thorough analysis of the effects of individual or combinations of parameters on the swimming performance. Such an efficient experimental design helps to optimize the process and determine factors that influence variability.

  5. Parametric study of the swimming performance of a fish robot propelled by a flexible caudal fin

    International Nuclear Information System (INIS)

    Low, K H; Chong, C W

    2010-01-01

    In this paper, we aim to study the swimming performance of fish robots by using a statistical approach. A fish robot employing a carangiform swimming mode had been used as an experimental platform for the performance study. The experiments conducted aim to investigate the effect of various design parameters on the thrust capability of the fish robot with a flexible caudal fin. The controllable parameters associated with the fin include frequency, amplitude of oscillation, aspect ratio and the rigidity of the caudal fin. The significance of these parameters was determined in the first set of experiments by using a statistical approach. A more detailed parametric experimental study was then conducted with only those significant parameters. As a result, the parametric study could be completed with a reduced number of experiments and time spent. With the obtained experimental result, we were able to understand the relationship between various parameters and a possible adjustment of parameters to obtain a higher thrust. The proposed statistical method for experimentation provides an objective and thorough analysis of the effects of individual or combinations of parameters on the swimming performance. Such an efficient experimental design helps to optimize the process and determine factors that influence variability.

  6. Identification of hemiclonal reproduction in three species of Hexagrammos marine reef fishes.

    Science.gov (United States)

    Kimura-Kawaguchi, M R; Horita, M; Abe, S; Arai, K; Kawata, M; Munehara, H

    2014-08-01

    Natural hybrids between the boreal species Hexagrammos octogrammus and two temperate species Hexagrammos agrammus and Hexagrammos otakii were observed frequently in southern Hokkaido, Japan. Previous studies revealed that H. octogrammus is a maternal ancestor of both hybrids; the hybrids are all fertile females and they frequently breed with paternal species. Although such rampant hybridization occurs, species boundaries have been maintained in the hybrid zone. Possible explanations for the absence of introgressions, despite the frequent backcrossing, might include clonal reproduction: parthenogenesis, gynogenesis and hybridogenesis. The natural hybrids produced haploid eggs that contained only the H. octogrammus genome (maternal ancestor) with discarded paternal genome and generated F1 -hybrid type offspring by fertilization with the haploid sperm of H. agrammus or H. otakii (paternal ancestor). This reproductive mode was found in an artificial backcross hybrid between the natural hybrid and a male of the paternal ancestor. These findings indicate that the natural hybrids adopt hybridogenesis with high possibility and produce successive generations through hybridogenesis by backcrossing with the paternal ancestor. These hybrids of Hexagrammos represent the first hybridogenetic system found from marine fishes that widely inhabit the North Pacific Ocean. In contrast with other hybridogenetic systems, these Hexagrammos hybrids coexist with all three ancestral species in the hybrid zone. The coexistence mechanism is also discussed. © 2014 The Fisheries Society of the British Isles.

  7. Ecological studies on the freshwater fishes of the Alligator Rivers Region, Northern Territory

    International Nuclear Information System (INIS)

    Bishop, K.A.; Allen, S.A.; Pollard, D.A.; Cook, M.G.

    1986-01-01

    The tropical climate of the Alligator Rivers Region of the Northern Territory has a distinctive Wet-Dry cycle resulting in seasonal flows in the creeks and rivers of its catchments. The present study, begun during August 1978, aimed at developing an ecological monitoring system that would detect changes in freshwater fish communities brought about by recent uranium mining and processing in the lowlands of the region

  8. San Juanico Hybrid System Technical and Institutional Assessment: Preprint

    Energy Technology Data Exchange (ETDEWEB)

    Corbus, D.; Newcomb, C.; Yewdall, Z.

    2004-07-01

    San Juanico is a fishing village of approximately 120 homes in the Municipality of Comondu, Baja California. In April, 1999, a hybrid power system was installed in San Juanico to provide 24-hour power, which was not previously available. Before the installation of the hybrid power system, a field study was conducted to characterize the electrical usage and institutional and social framework of San Juanico. One year after the installation of the hybrid power system a''post-electrification'' study was performed to document the changes that had occurred after the installation. In December of 2003, NREL visited the site to conduct a technical assessment of the system.

  9. Ecological studies on the freshwater fishes of the Alligator Rivers region, Northern Territory

    International Nuclear Information System (INIS)

    Bishop, K.A.; Allen, S.A.; Pollard, D.A.; Cook, M.G.

    1990-01-01

    The tropical climate of the Alligator Rivers Region (ARR) has a distinctive wet-dry cycle , resulting in seasonal flows in the creeks and rivers of its catchments. The present study, begun in August 1978, was aimed at developing an ecological monitoring system that would detect any changes to the freshwater fish communities brought about by recent uranium mining and processing in the lowlands of the ARR. The focus of the synecological studies, was a description of spatial and temporal patterns in the community structure of the fish fauna. Interpretation of these patterns was made possible by the collection of detailed environmental data from the study sites. It was found that of the ARR seasonal changes in environmental conditions were so marked that they often obscured the effects of environmental gradients along a watercourse and differing environmental conditions characteristics of different types of waterbody. Hence it may not be entirely satisfactory to define environmental zones in these catchments based on overall environmental conditions through the whole seasonal cycle, because changes in any one such zone between seasons result in very marked changes in the fish communities of habitats in that zone. 34 refs., 22 tabs., 45 figs., 3 maps

  10. Forecasting fish stock dynamics under climate change: Baltic herring (Clupea harengus) as a case study

    DEFF Research Database (Denmark)

    Bartolino, V.; Margonski, P.; Lindegren, Martin

    2014-01-01

    Climate change and anthropogenic disturbances may affect marine populations and ecosystems through multiple pathways. In this study we present a framework in which we integrate existing models and knowledge on basic regulatory processes to investigate the potential impact of future scenarios...... of fisheries exploitation and climate change on the temporal dynamics of the central Baltic herring stock. Alternative scenarios of increasing sea surface temperature and decreasing salinity of the Baltic Sea from a global climate model were combined with two alternative fishing scenarios, and their direct......-term fish dynamics can be an informative tool to derive expectations of the potential long-term impact of alternative future scenarios of exploitation and climate change...

  11. Occurrence of Deoxynivalenol and Zearalenone in Commercial Fish Feed: An Initial Study

    Directory of Open Access Journals (Sweden)

    Sven Dänicke

    2013-01-01

    Full Text Available The control of mycotoxins is a global challenge not only in human consumption but also in nutrition of farm animals including aquatic species. Fusarium toxins, such as deoxynivalenol (DON and zearalenone (ZEN, are common contaminants of animal feed but no study reported the occurrence of both mycotoxins in fish feed so far. Here, we report for the first time the occurrence of DON and ZEN in samples of commercial fish feed designed for nutrition of cyprinids collected from central Europe. A maximal DON concentration of 825 μg kg−1 feed was found in one feed whereas average values of 289 μg kg−1 feed were noted. ZEN was the more prevalent mycotoxin but the concentrations were lower showing an average level of 67.9 μg kg−1 feed.

  12. Review of Battelle-Northwest technical studies on fusion--fission (hybrid) energy systems

    International Nuclear Information System (INIS)

    Liikala, R.C.; Leonard, B.R. Jr.; Wolkenhauer, W.C.; Aase, D.T.

    1974-01-01

    A variety of studies conducted over the past few years and the principal results of these studies are summarized. Studies of power producing hybrids, the use of fusion neutrons for transmutation of radioactive wastes, and the evaluation of the most likely combinations of fusion and fission technologies are discussed. (U.S.)

  13. Study on emission characteristics of hybrid bus under driving cycles in typical Chinese city

    Science.gov (United States)

    Xie, Yongdong; Xu, Guangju

    2017-09-01

    In this study, hybrid city bus was taken as the research object, through the vehicle drum test, the vehicle emissions of hybrid bus, the transient emissions of gas pollutants, as well as the particle size and number distribution were surveyed. The results of the studies are listed as follows: First, compared to traditional fuel bus, hybrid bus could reduce about 44% of the NOx emissions, 33% of the total hydrocarbon emissions, and 51% of the particles emissions. Furthermore, the distribution of particles number concentration of test vehicle became high in middle and low in both sides. More specifically, the particle number concentration was mainly concentrated in the range from 0.021 to 0.755μm, the maximum was 0.2μm, and particle size of particulate matter (PM) less than 1.2μm accounted for 95% of the total number concentration. Particulate mass concentration was increased with increment of particle size, and the maximum of particulate mass (PM) concentration was 6.2μm. On average, whether traditional fuel bus or hybrid bus, the particle size of particulate matter(PM) less than 2.5μm accounted for more than 98% in the particles emission. It is found that the particles are more likely to deposit to the lung, respiratory bronchioles and alveoli, causing respiratory and lung diseases. Therefore, how to control the PM emissions of hybrid bus is the key factor of the study.

  14. Fish gut-liver immunity during homeostasis or inflammation revealed by integrative transcriptome and proteome studies

    Science.gov (United States)

    Wu, Nan; Song, Yu-Long; Wang, Bei; Zhang, Xiang-Yang; Zhang, Xu-Jie; Wang, Ya-Li; Cheng, Ying-Yin; Chen, Dan-Dan; Xia, Xiao-Qin; Lu, Yi-Shan; Zhang, Yong-An

    2016-11-01

    The gut-associated lymphoid tissue, connected with liver via bile and blood, constructs a local immune environment of both defense and tolerance. The gut-liver immunity has been well-studied in mammals, yet in fish remains largely unknown, even though enteritis as well as liver and gallbladder syndrome emerged as a limitation in aquaculture. In this study, we performed integrative bioinformatic analysis for both transcriptomic (gut and liver) and proteomic (intestinal mucus and bile) data, in both healthy and infected tilapias. We found more categories of immune transcripts in gut than liver, as well as more adaptive immune in gut meanwhile more innate in liver. Interestingly reduced differential immune transcripts between gut and liver upon inflammation were also revealed. In addition, more immune proteins in bile than intestinal mucus were identified. And bile probably providing immune effectors to intestinal mucus upon inflammation was deduced. Specifically, many key immune transcripts in gut or liver as well as key immune proteins in mucus or bile were demonstrated. Accordingly, we proposed a hypothesized profile of fish gut-liver immunity, during either homeostasis or inflammation. Current data suggested that fish gut and liver may collaborate immunologically while keep homeostasis using own strategies, including potential unique mechanisms.

  15. Bioaccumulation of newly deposited mercury by fish and invertebrates : an enclosure study using stable mercury isotopes

    Energy Technology Data Exchange (ETDEWEB)

    Paterson, M.J.; Blanchfield, P.J.; Podemski, C.; Rudd, J.W.M.; Sandilands, K.A. [Fisheries and Oceans Canada, Winnipeg, MB (Canada). Freshwater Inst.; Hintelmann, H.H.; Ogrinc, N. [Trent Univ., Peterborough, ON (Canada). Dept. of Chemistry; Gilmour, C.C. [Smithsonian Environmental Research Center, Edgewater, MD (United States); Harris, R. [Tetra Tech Inc., Oakville, ON (Canada)

    2006-10-15

    Concentrations of methyl mercury (MeHg) are elevated in fish from North American lakes, which has resulted in the closure of fisheries and the issuance of consumption advisories in many areas. This study investigated the utility of using stable isotopes of enriched stable mercury (Hg) to examine Hg accumulation in aquatic communities. Enriched stable HG isotopes were added to 4 10 m diameter enclosures in an experimental lake to increase inorganic Hg loading. The objective of the study was to trace low-level additions of isotope-enriched Hg through the biogeochemical cycle and into the food web; and to determine the relative contribution of the newly deposited Hg to MeHg accumulation by fish and other biota. The experiment was conducted over 2 summers with a variety of enriched Hg isotopes being added each year. Data suggested that changes in deposition of inorganic Hg will result in changes in MeHg accumulation by fish and other biota. Results showed that within 1 month, spikes of Hg were detected in water, zooplankton, and benthic invertebrates as MeHg, and in fish as total Hg. In 2001, concentrations in water of inorganic spike Hg added in 2000 were near detection limits. Concentrations of 2000 spike MeHg in water and biota remained unchanged or greater. The accumulation of ambient, non-spike MeHg predominated in all organisms despite comparatively large increases in inorganic Hg loading. It was concluded that although long-term changes in Hg deposition may result in changes in MeHg accumulation by biota, it may take upwards of a decade for steady-state conditions to be achieved. Further research is needed to determine to what extent data from the enclosures can be applied to natural lakes. 29 refs., 5 tabs., 5 figs.

  16. Trophic dynamics of hexabromocyclododecane diastereomers and enantiomers in fish in a laboratory feeding study.

    Science.gov (United States)

    Luo, Xiao-Jun; Ruan, Wei; Zeng, Yan-Hong; Liu, Hong-Ying; Chen, She-Jun; Wu, Jiang-Ping; Mai, Bi-Xian

    2013-11-01

    The laboratory trophic transfer of hexabromocyclododecanes (HBCDs) was studied using predatory (oscar) fish and a prey species (tiger barb) exposed to a technical HBCD. Gut absorption, dynamic changes of diastereomer pattern and enantiomer fractions, and potential metabolism of HBCDs were examined. Compared with β- or γ-HBCD, α-HBCD showed lower absorption efficiency in the gut of oscar fish. A predominance of γ-HBCD was observed in the tiger barb after 5 d HBCD-exposed and oscar feeding on the tiger barb for 16 d. After 20 d of depuration, 41.1% γ-HBCD and 42.7% β-HBCD disappeared, and α-HBCD exceeded the initial amount. The transformation from γ-HBCD predominance in the food to α-HBCD predominance in the oscar was attributed mainly to the isomerization of γ-HBCD (at least 3% and up to 22.7%) to α-HBCD. Selective enrichment of the (+) α- and (-) β-enantiomers and no enantioselective enrichment of γ-HBCD were observed in the tiger barbs. No enantioselective uptake of the 3 diasteromers was found in the oscar gut. The enantiomer fractions of α- and γ-diastereomers were significantly higher, but that of β-diastereomer were significantly lower in the oscars than in the tiger barbs, indicating enantioselective metabolism of the 3 diastereomers. Two HBCD monohydroxylated metabolites were detected in the 2 fish species, but their composition patterns differed, indicating a species-specific metabolism of HBCD in the studied fish species. © 2013 SETAC.

  17. Expanding the toolbox for studying the biological responses of individual fish to hydropower infrastructure and operating strategies

    International Nuclear Information System (INIS)

    Hasler, C.T.; Cooke, S.J.; Patterson, D.A.

    2009-01-01

    Hydropower infrastructure and the operational strategies used by power utilities have the potential to change local aquatic environments. However, few studies have evaluated sub-organismal responses such as physiological consequences of individual fish to fluctuating flows or hydropower infrastructure such as fishways or turbines. Rather than review the impacts of hydropower on fish, this paper detailed the behavioural, energetic, genomic, molecular, forensic, isotopic, and physiological tools available for studying sub-organismal responses of fish to hydropower infrastructure and operating procedures with a critical assessment of their benefits and limitations. A brief summary of the current state of knowledge regarding the 12 types of tools was provided along with their usefulness in fisheries science and environmental management. The benefits and limitations of using these techniques for evaluating hydropower impacts on fish and fish habitat were discussed. Two case studies were presented to demonstrate how the inclusion of individual-based information into hydropower research has helped to improve the understanding of complex fish and hydropower issues. Practitioners can use the expanded toolbox to assess fishway performance, migration delays, and fish responses to fluctuating flows through a mechanistic approach. These tools are also relevant for evaluating other anthropogenic impacts such as water withdrawal for irrigation or drinking water, habitat alteration, and fisheries interactions. The expanded toolbox can contribute to a more sustainable hydropower industry by providing regulators with tools for making informed decisions and evaluating compliance issues. 150 refs., 1 tab., 4 figs

  18. Studies on processing, consumer survey and storage stability of a ready-to-reconstitute fish cutlet mix.

    Science.gov (United States)

    Shaviklo, G Reza; Thorkelsson, Gudjon; Sveinsdottir, Kolbrun; Pourreza, Fatemeh

    2013-10-01

    A convenience ready-to-reconstitute cutlet mix containing 30% fish protein powder was developed to improve the nutritional quality of the product. Consumer survey was based on the home use test (HUT) method. The acceptance of the fish cutlet mix (FCM) was studied using a 9-point hedonic scale ranging from 1 (extremely dislike) to 9 (extremely like). Product's characteristics and stability were studied during 6 months of storage at 27 ± 2 °C. The FCM packed in a polyethylene bag and cardboard box was stable during the storage period. There were no changes in colour, moisture gain and water activity, and TBARS values remained low. The FCM was accepted by the consumers in the study (n = 85). The average liking was high (7.5 ± 1.3) and it was influenced by frequency of fish and chicken consumption, educational level and household size. People who ate fish once a week liked the product more than other consumers. Also those with higher educational level and bigger household size. The results in this paper are important information for companies planning to develop ready-to-eat products fortified with fish proteins. The products could be means of increasing fish consumption in countries/areas where there is no tradition of consuming fresh or frozen fish.

  19. Simulation study of two-ion hybrid resonance heating

    International Nuclear Information System (INIS)

    Riyopoulos, S.; Tajima, T.

    1986-02-01

    A one-dimensional low-noise, low-frequency electromagnetic particle simulation code that is appropriate for investigation of ion cyclotron resonance heating (ICRH) is developed. Retaining the hyperbolicity of the electromagnetic waves and exploiting nearly one-dimensional characteristics (perpendicular to the external magnetic field) of the ICRH, we use the guiding center electron approximation for the transverse electronic current calculation. We observe mode conversion of the incoming magnetosonic wave into the electrostatic ion-ion hybrid mode accompanied by strong ion-heating. The dependence of this heating on the different plasma parameters is examined through a series of simulations, focusing mainly on wave incidence from the high field side. Because K/sub parallel/ = 0 in our runs, the conventional Landau damping cannot explain the ion heating. Non-linear mechanisms for energy transfer are discussed. Our numerical results demonstrate the importance of the non-linear wave particle interaction for energy transfer are discussed. Our numerical results demonstrate the importance of the non-linear wave particle interaction for energy absorption during radio frequency heating in the ion cyclotron regime. 32 refs., 17 figs

  20. Study on Drive System of Hybrid Tree Harvester

    Directory of Open Access Journals (Sweden)

    Shen Rong-feng

    2017-01-01

    Full Text Available Hybrid tree harvester with a 60 kW diesel engine combined with a battery pile could be a “green” forest harvesting and transportation system. With the new design, the diesel engine maintains a constant engine speed, keeping fuel consumption low while charging the batteries that drive the forwarder. As an additional energy saving method, the electric motors work as generators to charge the battery pile when the vehicle moves downhill. The vehicle is equipped with six large wheels providing high clearance over uneven terrain while reducing ground pressure. Each wheel is driven via a hub gear by its own alternating current motor, and each of the three wheel pairs can be steered independently. The combination of the diesel engine and six electric motors provides plenty of power for heavy lifting and pulling. The main component parameters of the drive system are calculated and optimized with a set of dynamics and simulated with AVL Cruise software. The results provide practical insights for the fuel tree harvester and are helpful to reduce the structure and size of the tree harvester. Advantage Environment provides information about existing and future products designed to reduce environmental impacts.

  1. Study on hybrid ground-coupled heat pump systems

    Energy Technology Data Exchange (ETDEWEB)

    Yi, Man; Hongxing, Yang [Renewable Energy Research Group, The Hong Kong Polytechnic University, Hong Kong (China); Zhaohong, Fang [School of Thermal Energy Engineering, Shandong Architecture University, Jinan (China)

    2008-07-01

    Although ground-coupled heat pump (GCHP) systems are becoming attractive air-conditioning systems in some regions, the significant drawback for their wider application is the high initial cost. Besides, more energy is rejected into ground by the GCHP system installed in cooling-dominated buildings than the energy extracted from ground on an annual basis and this imbalance can result in the degradation of system performance. One of the available options that can resolve these problems is to apply the hybrid ground-coupled heat pump (HGCHP) systems, with supplemental heat rejecters for rejecting extra thermal energy when they are installed in cooling-dominated buildings. This paper presents a practical hourly simulation model of the HGCHP system by modeling the heat transfer of its main components. The computer program developed on this hourly simulation model can be used to calculate the operating data of the HGCHP system according to the building load. The design methods and running control strategies of the HGCHP system for a sample building are investigated. The simulation results show that proper HGCHP system can effectively reduce both the initial cost and the operating cost of an air-conditioning system compared with the traditional GCHP system used in cooling-dominated buildings. (author)

  2. Study and Analysis of Congestion Management in Hybrid Electric Market

    Directory of Open Access Journals (Sweden)

    Moayed Mohseni

    2013-01-01

    Full Text Available The congestion management system is a systematic approach, collaboratively developed and implemented throughout a metropolitan region that provides for the safe and effective management and operation of new and existing transportation facilities through the use of demand reduction and operational management strat­e­gies. In this paper we try to present some points which should be investigated in congestion management problems. We calculate different kinds of congestion problems which may be occurred in our network. Here, the hybrid model is used to solve problems in the electricity market to solve the congestion problem in the network and Benders techniques is used together with an optimal power flow (OPF. In fact, by using of Benders algorithm the problem is divided into two major and minor problems. Therefore, the major problem related to the economy sector and no network is included and the minor problem is to solve the network and examine the accuracy of the network. Benders algorithm has been tested on a standard network IEEE 24 bus and Matlab software is used to implement the algorithm.

  3. Identification of Cannabis sativa L. using the 1-kbTHCA synthase-fluorescence in situ hybridization probe.

    Science.gov (United States)

    Jeangkhwoa, Pattraporn; Bandhaya, Achirapa; Umpunjun, Puangpaka; Chuenboonngarm, Ngarmnij; Panvisavas, Nathinee

    2017-03-01

    This study reports a successful application of fluorescence in situ hybridization (FISH) technique in the identification of Cannabis sativa L. cells recovered from fresh and dried powdered plant materials. Two biotin-16-dUTP-labeled FISH probes were designed from the Cannabis-specific tetrahydrocannabinolic acid synthase (THCAS) gene and the ITS region of the 45S rRNA gene. Specificity of probe-target hybridization was tested against the target and 4 non-target plant species, i.e., Humulus lupulus, Mitragyna speciosa, Papaver sp., and Nicotiana tabacum. The 1-kb THCA synthase hybridization probe gave Cannabis-specific hybridization signals, unlike the 700-bp Cannabis-ITS hybridization probe. Probe-target hybridization was also confirmed against 20 individual Cannabis plant samples. The 1-kb THCA synthase and 700-bp Cannabis-ITS hybridization probes clearly showed 2 hybridization signals per cell with reproducibility. The 1-kb THCA synthase probe did not give any FISH signal when tested against H. lupulus, its closely related member of the Canabaceae family. It was also showed that 1-kb THCA synthase FISH probe can be applied to identify small amount of dried powdered Cannabis material with an addition of rehydration step prior to the experimental process. This study provided an alternative identification method for Cannabis trace. Copyright © 2016. Published by Elsevier B.V.

  4. [Study of biological value of beef produced by interspecies hybrids of domestic cattle and wild yaks].

    Science.gov (United States)

    Bagirov, V A; Chernukha, I M; Lisitsin, A V; Zinovieva, N A

    2014-01-01

    The comparative study of the chemical composition and biological values of beef produced by hybrids of Angus cattle with wild yaks (hybrid beef) and pure-bred Angus cattle (traditional beef) has been carried out. Longissimus muscle samples were used for analysis. It was observed, that the hybrid beef samples had the practically equal protein content comparing to traditional beef (21.1 vs. 21.6 per cent) but were characterized by the lower fat content (1.2 vs. 2.5 per cent). The higher biological value of hybrid beef comparing to traditional beef has been shown. The value of protein-quality index, calculated as the ratio of tryptophan amino acid to oxyprolin and characterizing the ratio of high biological value proteins to low biological value proteins was 8.1 vs. 5.7. The values of amino acid indexes [ratio of essential amino acids (EAA) to non-essential amino acids (NAA) and ratio of EAA to the total amount of amino acids (TAA)] were EAA/NAA = 0.77 vs. 0.65 and EAA/TAA = 0.43 vs. 0.39. The protein of hybrid beef was characterized by the higher content of a number of the essential amino acids: by a factor of 1, 77 for threonin, 1.23--for valin, 1.09--for lysin, 1.17--for leucine and 1.19--for tryptophan. The amount of the essential amino acids in 1 gram of protein of the hybrid beef was 434.7 mg against 393.1 mg for traditional beef It has been shown, that the protein of the hybrid beef comparing to traditional beef is characterized by the higher values of the amino acid scores calculated for EAA.

  5. A Pilot Study of Pedestrians with Visual Impairments Detecting Traffic Gaps and Surges Containing Hybrid Vehicles

    Science.gov (United States)

    Emerson, Robert Wall; Naghshineh, Koorosh; Hapeman, Julie; Wiener, William

    2010-01-01

    The increasing number of hybrid and quiet internal combustion engine vehicles may impact the travel abilities of pedestrians who are blind. Pedestrians who rely on auditory cues for structuring their travel may face challenges in making crossing decisions in the presence of quiet vehicles. This article describes results of initial studies looking at the crossing decisions of pedestrians who are blind at an uncontrolled crossing (no traffic control) and a light controlled intersection. The presence of hybrid vehicles was a factor in each situation. At the uncontrolled crossing, Toyota hybrids were most difficult to detect but crossing decisions were made more often in small gaps ended by a Honda hybrid. These effects were seen only at speed under 20 mph. At the light controlled intersection, parallel surges of traffic were most difficult to detect when made up only of a Ford Escape hybrid. Results suggest that more controlled studies of vehicle characteristics impacting crossing decisions of pedestrians who are blind are warranted. PMID:21379367

  6. In vivo study of the survival of Lactobacillus delbruecki subsp. bulgaricus CECT 4005T and Streptococcus thermophilus CECT 801 by DVC-FISH after consumption of fermented milk.

    Science.gov (United States)

    García-Hernández, J; Moreno, Y; Chuan, C; Hernández, M

    2012-10-01

    Direct Viable Count (DVC) method has been recently combined with fluorescent in situ hybridization (FISH) for the specific detection of viable cells of Lactobacillus delbrueckii subsp. bulgaricus CECT 4005T and Streptococcus thermophilus CECT 801. This method has been used to determine their in vitro viability to gastrointestinal juices, being the resistance of L. delbrueckii subsp. bulgaricus and S. thermophilus 26.2% and 9.2%, respectively. On the other hand, an in vivo study has been carried out with the application of this technique for their detection in human feces, after consuming fermented milk. Cells of L. delbrueckii subsp. bulgaricus CECT 4005T were not detected, whereas viable cells of S. thermophilus CECT 801 were detected in a number higher than 10(3) cells per gram in a 30% of the samples after 4 wk of consumption. DVC-FISH is a quick and culture-independent useful method, which has been applied for the 1st time in an in vivo survival study of LAB. © 2012 Institute of Food Technologists®

  7. Studies on qualitative and quantitative chemical changes in gamma irradiated fish and fishery products in India

    International Nuclear Information System (INIS)

    Bandyopadhyay, C.; Rao, B.Y.K.

    1981-01-01

    Studies on qualitative and quantitative changes in lipids and allied constituents of fresh as well as salted dehydrated Indian mackerel (Rastrelliger kanagurta) during storage after gamma-irradiation have been carried out. The samples were evaluated subjectively as well by determining various physico-chemical parameters such as moisture content, total volatile basic nitrogen (TVBN), trimethyl amine nitrogen (TMAN), lipid content, iodine value (IV), peroxide value (PV), thiobarbituric acid (TBA) value, glyceride and free fatty acid (FFA) content. Shelf life extension of radurized fresh (150 Krad) as well as salted dehydrated (200 Krad) Indian mackerel during ice-temperature (0-2 0 C) and ambient temperature (25-30 0 C) storage, respectively, was observed without detectable rancidity and off-flavours. However, the extended storage life was dependent upon storage temperature in the case of fresh fish and upon moisture content in the case of salted dehydrated fish. Besides a suppression in TVBN and TMAN values, the changes in the physico-chemical parameters including the lipid composition of the irradiated samples in both cases were parallel to those in the unirradiated controls. No new compounds were detected in any of the lipid samples of the irradiated fish by thin-layer gas-liquid chromatography. Pasteurization dose of irradiation (200 Krad) did not influence the yield or the composition of the total volatiles of salted dehydrated fish. The commercial sun-dried products gave rise to two-fold increases in the yield of total volatiles, which showed composition comparable to that of the laboratory processed irradiated samples

  8. FISH-BOL and seafood identification: geographically dispersed case studies reveal systemic market substitution across Canada.

    Science.gov (United States)

    Hanner, Robert; Becker, Sven; Ivanova, Natalia V; Steinke, Dirk

    2011-10-01

    The Fish Barcode of Life campaign involves a broad international collaboration among scientists working to advance the identification of fishes using DNA barcodes. With over 25% of the world's known ichthyofauna currently profiled, forensic identification of seafood products is now feasible and is becoming routine. Driven by growing consumer interest in the food supply, investigative reporters from five different media establishments procured seafood samples (n = 254) from numerous retail establishments located among five Canadian metropolitan areas between 2008 and 2010. The specimens were sent to the Canadian Centre for DNA Barcoding for analysis. By integrating the results from these individual case studies in a summary analysis, we provide a broad perspective on seafood substitution across Canada. Barcodes were recovered from 93% of the samples (n = 236), and identified using the Barcode of Life Data Systems "species identification" engine ( www.barcodinglife.org ). A 99% sequence similarity threshold was employed as a conservative matching criterion for specimen identification to the species level. Comparing these results against the Canadian Food Inspection Agency's "Fish List" a guideline to interpreting "false, misleading or deceptive" names (as per s 27 of the Fish Inspection regulations) demonstrated that 41% of the samples were mislabeled. Most samples were readily identified; however, this was not true in all cases because some samples had no close match. Others were ambiguous due to limited barcode resolution (or imperfect taxonomy) observed within a few closely related species complexes. The latter cases did not significantly impact the results because even the partial resolution achieved was sufficient to demonstrate mislabeling. This work highlights the functional utility of barcoding for the identification of diverse market samples. It also demonstrates how barcoding serves as a bridge linking scientific nomenclature with approved market names

  9. Fish Consumption Moderates Depressive Symptomatology in Elderly Men and Women from the IKARIA Study

    Directory of Open Access Journals (Sweden)

    Christina Chrysohoou

    2011-01-01

    Full Text Available Background. The aim was to examine the association of depressive symptoms with fish eating habits, in elderly individuals. Methods. From June to October of 2009, we studied 330 men and 343 women, aged 65 to 100 years, permanent inhabitants of Ikaria Island. Among several characteristics, depression was assessed with the Geriatric Depression scale (GDS range 0–15, while dietary habits through a valid semiquantitative food frequency questionnaire. Results. Women had significantly higher values of the GDS compared to men (4.8±3.5 versus 3.3±3.1, =.001. Participants in the upper tertile of depression scale ate less frequent fish and consumed higher quantities of alcohol, compared to those in the lowest tertile (all 3 times/week versus never/rare was inversely associated with the odds of having GDS greater the median value (i.e., 4 (oddsratio=0.34, 95% CI: 0.19, 0.61, after controlling for several cofounders. Conclusion. Frequent fish consumption in elderly seems to moderate depression mood.

  10. A study on some enzymes in rice field fish as biomarkers for pesticide exposure

    International Nuclear Information System (INIS)

    Juzu Hayati Arshad; Mazlina Muhammad; Salmijah Surif; Abdul Manan Mat Jais

    2002-01-01

    A study was carried out on three enzymes in rice field fish which can be used as possible biomarkers for pesticide exposure. The results obtained showed that the activity of the enzyme EROD (ethoxyresorufin-o-deethylase) increased between 1.5-2.2 fold in snakehead or haruan (Channa striata) sampled from the pesticide polluted areas, particularly the recycled areas and only a slight increase in EROD activity in climbing perch or puyu (Anabas testudineus). Increase in the activity of carboxylesterase was also noted. The percentage inhibition of acety1cholinesterase ranges from 18.4%-57.4% and 2.5%-34.2% for Channa striata and Anabas testudineus, respectively. Generally, a higher percentage of acety1cholinesterase inhibition was noted for those fish sampled from the recycled areas. The noted changes in the activity of these enzymes suggest exposure of rice field fish to foreign compounds, possibly pesticides, which are known to induce EROD activity and inhibit acety1cholinesterase activity. Therefore it may be possible to use these enzymes as biomarkers for pesticide exposure. (Author)

  11. Evaluation of coastal waters receiving fish processing waste: Lota Bay as a case study.

    Science.gov (United States)

    Ahumada, Ramón; Rudolph, Anny; Contreras, Sergio

    2004-01-01

    Liquid wastes from the fish meal and oil processing industries produce serious environmental impacts in coastal embayments on the coasts of Chile and Peru. This article presents an analysis of an environmental monitoring program at Lota Bay, a shallow coastal indentation in central Chile (37 degrees S) exposed to industrial fishing activity. The study of the environmental impact produced by waste effluents permitted making an evaluation of the bay's capacity for seasonal recovery from this impact. Seasonal cruises were carried out during 1994 and in 1996, 1997, and 1998. Variables analyzed included salinity, temperature, dissolved oxygen, ammonium concentration and surface oil and grease. The hydrographic regime of Lota Bay follows a seasonal pattern, where, typical of most SE pacific embayments, waters from subsuperficial oxygen minimum zones moved into the bay. The percentages of dissolved oxygen were critical in the area of organic waste discharge. The impact of wastewater is related to the type and status of the fishery, including: (i) overloads of plant production lines, (ii) maintenance and cleaning of installations, and (iii) degree of shipboard fishing conservation. Major alterations were observed in summer, when the highest discharge of organic load occurred. In winter, an improvement in the re-aeration conditions reduced the impact. Remedial measures implemented beginning in 1997 arose from the monitoring program and had to be separated into two recovery factors including (a) internal management of plants and (b) treatment of plant effluents.

  12. Conceptual study of lower hybrid frequency heating of the J.E.T. plasma

    International Nuclear Information System (INIS)

    Tonon, G.; Bernard, M.; Brambilla, M.

    1981-04-01

    The aim of this report is to bring up the conclusions of the conceptual study of the J.E.T. plasma heating by lower hybrid waves. While giving an overall view of potential use for lower hybrid heating (LHH) in the J.E.T. plasma, this study deals more specificaly with the following concerns: up-to-date status of LHH theory and experiment; the physics of LHH on J.E.T.: RF requirements and expected results from numerical computations; the J.E.T. LHH coupling structure; the 10 MW RF generator; the associated RF diagnostics; the time schedule and the cost estimates

  13. Feasibility study of a fission supressed blanket for a tandem-mirror hybrid reactor

    International Nuclear Information System (INIS)

    Moir, R.W.; Lee, J.D.; Barr, W.L.

    1981-01-01

    A study of fission suppressed blankets for the tandem mirror not only showed such blankets to be feasible but also to be safer than fissioning blankets. Such hybrids could produce enough fissile material to support up to 17 light water reactors of the same nuclear power rating. Beryllium was compared to 7 Li for neutron multiplication; both were considered feasible but the blanket with Li produced 20% less fissile fuel per unit of nuclear power in the reactor. The beryllium resource, while possibly being too small for extensive pure fusion application, would be adequate (with carefully planned industrial expansion) for the hybrid because of the large support ratio, and hence few hybrids required. Radiation damage and coatings for beryllium remain issues to be resolved by further study and experimentation. Molten salt reprocessing was compared to aqueous solution reprocessing

  14. Dietary fish oil supplements increase tissue n-3 fatty acid composition and expression of delta-6 desaturase and elongase-2 in Jade Tiger hybrid abalone.

    Science.gov (United States)

    Mateos, Hintsa T; Lewandowski, Paul A; Su, Xiao Q

    2011-08-01

    This study was conducted to investigate the effects of fish oil (FO) supplements on fatty acid composition and the expression of ∆6 desaturase and elongase 2 genes in Jade Tiger abalone. Five test diets were formulated to contain 0.5, 1.0, 1.5, 2.0 and 2.5% of FO respectively, and the control diet was the normal commercial abalone diet with no additional FO supplement. The muscle, gonad and digestive glands (DG) of abalone fed with all of the five test diets showed significantly high levels of total n-3 polyunsaturated fatty acid (PUFA), eicosapentaenoic acid (EPA), docosapentaenoic acid n-3 (DPAn-3), and docosahexaenoic acid (DHA) than the control group. In all three types of tissue, abalone fed diet supplemented with 1.5% FO showed the highest level of these fatty acids (P abalone fed diet supplemented with 2% FO (P abalone fed diet supplemented with 1.5% FO (P abalone fed with diet containing 0.5% FO supplement (P abalone, with 1.5% being the most effective supplementation level.

  15. [Pickled food, fish, seafood intakes and oral squamous cell carcinoma: a case-control study].

    Science.gov (United States)

    Huang, J F; Qiu, Y; Cai, L; Liu, F P; Chen, F; Yan, L J; Wu, J F; Bao, X D; Liu, F Q; Zheng, X Y; Lin, L S; He, B C

    2017-08-06

    Objective: To investigate the effects between fish, seafood and pickled food intakes on oral squamous cell carcinoma (OSCC). Methods: A case-control study was carried out in Fujian area during September 2010 to December 2016, in which 604 newly diagnosed primary OSCC cases confirmed by pathological diagnosis were collected from hospital and 1 343 control subjects were enrolled from community and healthy hospital population. Demographic data, history of smoking drinking and tea drinking, oral hygiene status and dietary behaviors (fish, seafood and pickled food intakes) were collected by in-person interviews using a standard questionnaire.Using unconditional logistic regression to estimate adjusted odds ratios ( ORs ) and corresponding 95% confidence intervals ( CIs ) to assess the effects of fish, seafood and pickled food intakes on OSCC. Analysis stratified by smoking, alcohol drinking and bad prosthesis to explore the possible difference in association between subgroups. Multiplicative interactions and additive interactions between fish and bad prosthesis, seafood and alcohol drinking, pickled food and bad prosthesis were assessed by unconditional logistic regression, relative excess risk due to interaction ( RERI ), attributable proportion due to interaction ( AP ) and synergy index (S). Results: The average age of case group and control group were separately (58.69±13.92) years old and (59.27±11.37) years old (χ(2)=4.75, P= 0.191). The people whose fish and seafood intakes ≥3 times/week had the lower risk of OSCC, the adjusted OR (95 %CI ) values were 0.63 (0.52-0.77) and 0.51 (0.41-0.64); The stratified analysis indicated that the people having bad prosthesis had the lower risk of OSCC if they eating fish ≥3 times/week, and the adjusted OR (95 %CI ) values was 0.53 (0.39-0.71); the people having bad prosthesis had the higher risk of OSCC if they eating pickled food ≥3 times/week, the adjusted OR (95 %CI ) values was 1.37 (1.02-1.88). Regularly eating

  16. [Experimental study on novel hybrid artificial trachea transplantation].

    Science.gov (United States)

    Liu, Wenliang; Xiao, Peng; Liang, Hengxing; An, Ran; Cheng, Gang; Yu, Fenglei

    2014-04-01

    We developed and designed a new type of artificial trachea. The basic structure of the artificial trachea was polytetrafluoroethylene vascular prosthesis linked with titanium rings on both sides. Dualmesh was sutured on titanium rings. This experimentation follows the replacement of trachea in dogs with a combined artificial trachea to investigate the feasibility of this type of prosthesis. Sixteen dogs were implanted with the combined artificial trachea after resection of 5 cm of cervical trachea. The 5 cm-long trachea of dogs on the necks were resected and the reconstruction of the defect of the trachea was performed with trachea prosthesis. According to the method of trachea reconstruction, the models were divided into 2 groups, artificial trachea implantation group (the control group, n = 8) and group of artificial trachea implantation with growth factor (the experimental group, n = 8). Then computer tomography scan (CT), bronchoscope and pathologic examination were conducted periodically to observe the healing state of the hybrid artificial trachea. None of the dogs died during operation of cervical segmental trachea construction. But four dogs in the control group died of apnea in succession because artificial trachea was displaced and the lumen was obstructed, while 2 dogs died in the experimental group. In the first month there was granulation around anastomosis with slight stenosis. The rest of dogs were well alive until they were sacrificed 14 months later. The mean survival time of the experimental group was longer than that of the control group. The rate of infection, anastomotic dehiscence, severe stenosis and accidental death in the experimental group were lower than the control group (P anastomosis effectively but infections and split or displacement of the artificial trachea are still major problems affecting long-term survival of the animals. Application of growth factors to a certain extent promotes tissue healing by changing the local environment.

  17. PV-wind hybrid system performance. A new approach and a case study

    Energy Technology Data Exchange (ETDEWEB)

    Arribas, Luis; Cano, Luis; Cruz, Ignacio [Departamento de Energias Renovables, CIEMAT, Avda. Complutense 22, 28040 Madrid (Spain); Mata, Montserrat; Llobet, Ermen [Ecotecnia, Roc Boronat 78, 08005 Barcelona (Spain)

    2010-01-15

    Until now, there is no internationally accepted guideline for the measurement, data exchange and analysis of PV-Wind Hybrid Systems. As there is a need for such a tool, so as to overcome the barrier that the lack of confidence due to the absence of reliability means for the development of the market of Hybrid Systems, an effort has been made to suggest one tool for PV-Wind Hybrid Systems. The suggested guidelines presented in this work are based on the existing guidelines for PV Systems, as a PV-Wind Hybrid system can be roughly thought of as a PV System to which wind generation has been added. So, the guidelines for PV Systems are valid for the PV-Wind System, and only the part referred to wind generation should be included. This has been the process followed in this work. The proposed method is applied to a case study, the CICLOPS Project, a 5 kW PV, 7.5 kW Wind Hybrid system installed at the Isolated Wind Systems Test Site that CIEMAT owns in CEDER (Soria, Spain). This system has been fully monitored through a year and the results of the monitoring activity, characterizing the long-term performance of the system are shown in this work. (author)

  18. PV-wind hybrid system performance. A new approach and a case study

    International Nuclear Information System (INIS)

    Arribas, Luis; Cano, Luis; Cruz, Ignacio; Mata, Montserrat; Llobet, Ermen

    2010-01-01

    Until now, there is no internationally accepted guideline for the measurement, data exchange and analysis of PV-Wind Hybrid Systems. As there is a need for such a tool, so as to overcome the barrier that the lack of confidence due to the absence of reliability means for the development of the market of Hybrid Systems, an effort has been made to suggest one tool for PV-Wind Hybrid Systems. The suggested guidelines presented in this work are based on the existing guidelines for PV Systems, as a PV-Wind Hybrid system can be roughly thought of as a PV System to which wind generation has been added. So, the guidelines for PV Systems are valid for the PV-Wind System, and only the part referred to wind generation should be included. This has been the process followed in this work. The proposed method is applied to a case study, the CICLOPS Project, a 5 kW PV, 7.5 kW Wind Hybrid system installed at the Isolated Wind Systems Test Site that CIEMAT owns in CEDER (Soria, Spain). This system has been fully monitored through a year and the results of the monitoring activity, characterizing the long-term performance of the system are shown in this work. (author)

  19. Study of PDMS conformation in PDMS-based hybrid materials prepared by gamma irradiation

    International Nuclear Information System (INIS)

    Lancastre, J.J.H.; Fernandes, N.; Margaça, F.M.A.; Miranda Salvado, I.M.; Ferreira, L.M.; Falcão, A.N.; Casimiro, M.H.

    2012-01-01

    Polydimethylsiloxane-silicate based hybrid materials have recognized properties (high flexibility, low elastic modulus or high mechanical strength) for which there are a large number of applications in development, such as for the bioapplications field. The hybrids addressed in the present study were prepared by gamma irradiation of a mixture of polydimethylsiloxane (PDMS) with tetraethylorthosilicate (TEOS) and zirconium propoxide (PrZr) without addition of any solvent or other product. The materials are homogeneous, transparent, monolithic and flexible. The structure dependence on the PrZr content is addressed. A combination of X-ray diffraction (XRD) and Infrared Spectroscopy (IR) was used. The results reveal that the polymer in the hybrids prepared with PrZr, in a content≤5 wt%, shows a structure similar to that in the irradiated pure polymer sample. In these samples the presence of ordered polymer regions is clearly found. For samples prepared with higher content of Zr almost no ordered polymer regions are observed. The addition of PrZr plays an important role on polymer conformation in these hybrid materials. - Highlights: ► PDMS-based hybrid materials were prepared by γ-irradiation. ► FTIR, ATR/FT-IR and XRD techniques were used to characterize the materials. ► Changes in FTIR bands reflect growth of crosslinking network. ► Above certain Zr concentration regions of Zr-silicate oxide are formed. ► Zr content determines conformation of the polymer chain network.

  20. Detection of MYCN Gene Amplification in Neuroblastoma by Fluorescence In Situ Hybridization: A Pediatric Oncology Group Study

    Directory of Open Access Journals (Sweden)

    Prasad Mathew

    2001-01-01

    Full Text Available To assess the utility of fluorescence in situ hybridization (FISH for analysis of MYCN gene amplification in neuroblastoma, we compared this assay with Southern blot analysis using tumor specimens collected from 232 patients with presenting characteristics typical of this disease. The FISH technique identified MYCN amplification in 47 cases, compared with 39 by Southern blotting, thus increasing the total number of positive cases by 21%. The major cause of discordancy was a low fraction of tumor cells (≤30% replacement in clinical specimens, which prevented an accurate estimate of MYCN copy number by Southern blotting. With FISH, by contrast, it was possible to analyze multiple interphase nuclei of tumor cells, regardless of the proportion of normal peripheral blood, bone marrow, or stromal cells in clinical samples. Thus, FISH could be performed accurately with very small numbers of tumor cells from touch preparations of needle biopsies. Moreover, this procedure allowed us to discern the heterogeneous pattern of MYCN amplification that is characteristic of neuroblastoma. We conclude that FISH improves the detection of MYCN gene amplification in childhood neuroblastomas in a clinical setting, thus facilitating therapeutic decisions based on the presence or absence of this prognostically important biologic marker.

  1. Phytoremediation Capabilities of Spirodela polyrhiza and Salvinia molesta in Fish Farm Wastewater: A Preliminary Study

    Science.gov (United States)

    Ng, Y. S.; Samsudin, N. I. S.; Chan, D. J. C.

    2017-06-01

    Fish farm wastewater needs to be treated as it contains considerably high loading of suspended solids and dissolved nutrients from accumulation of by-products e.g. fish excretions and uneaten feed. In this study, macrophytes, namely Spirodela polyrhiza and Salvinia molesta were examined for their phytoremediation efficiency in treating fish farm wastewater in a raceway pond rig. It was carried out indoor for 14 days under controlled environment. Water samples was collected once every 2 days for analysis of NO3 -- N, PO4 3-, NH3-N, COD, turbidity, MLVSS and pH. The results showed that there was decrement of phosphate in fish farm wastewater using either S. polyrhiza or S. molesta. Interestingly, S. polyrhiza was found to be more efficient in phosphate uptake as it removed 72% phosphate at day 4 and up to 95% in the end of the experiment whereas 72% phosphate removal was only achieved by S. molesta at day 10. Similar ammonia decrement was observed for both plants and most of the ammonia were not detected in the wastewater by day 10 for S. polyrhiza, while by day 8 for S. molesta. Nitrate showed increment for both plants which could be due to nitrification. Both plants achieved highest COD removal on day 12, whereby 68% for S. polyrhiza and 63% for S. molesta. They were able to reduce turbidity and total suspended solids (TSS) to very low level and significantly increase clarity of wastewater. S. polyrhiza reduced up to 96% of initial turbidity value and 86% of TSS. 82% reduction of initial turbidity and 79% TSS decrement were observed for S. molesta. pH fluctuations were minimum for both plants, with a range between 7.62 to 7.77. Both plants demonstrated biomass increment for fresh weight in which 84% for S. polyrhiza while 85% for S. molesta. This study proved that the macrophytes were able to treat fish farm wastewater by significantly removing phosphate, ammonia, turbidity and TSS. It aids in minimizing pollutants released to receiving waters and producing biomass

  2. Immunity to Fish Rhabdoviruses

    OpenAIRE

    Purcell, Maureen K.; Laing, Kerry J.; Winton, James R.

    2012-01-01

    Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabd...

  3. Methodological issues affecting the study of fish parasites. II. Sampling method affects ectoparasite studies

    Czech Academy of Sciences Publication Activity Database

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2016-01-01

    Roč. 121, č. 1 (2016), s. 59-66 ISSN 0177-5103 R&D Projects: GA ČR GBP505/12/G112 Institutional support: RVO:68081766 Keywords : Parasite community * Fish sampling method * Methodology * Parasitological examination * Rutilus rutilus Subject RIV: EG - Zoology Impact factor: 1.549, year: 2016

  4. Studies on corrosion protection of laser hybrid welded AISI 316 by laser remelting

    DEFF Research Database (Denmark)

    Olsen, Flemming Ove; Ambat, Rajan; Rasmussen, A.J.

    2005-01-01

    laser surface melting on microstructure and corrosion behaviour of AISI 316L welds. Welding and laser treatment parameters were varied. General corrosion behaviour of the weld and laser treated surface was characterised using a gel visualization test. The local electrochemistry of the weld and laser......Unlike in autogenous laser welding, hybrid laser welding of stainless steel could introduce grain boundary carbides due to low cooling rates. Formation of grain boundary carbides leads to reduced corrosion properties. Studies have initially been carried out on hybrid laser welding and subsequent...... treated surface was investigated using a novel micro electrochemical technique with a tip resolution of ~1 mm. Results show that hybrid laser welding of 316L has increased corrosion susceptibility probably as a result of grain boundary carbide formation. However a suitable post laser treatment could...

  5. A study on evaluating the power generation of solar-wind hybrid systems in Izmir, Turkey

    Energy Technology Data Exchange (ETDEWEB)

    Ulgen, K. [Ege Univ., Solar Energy Inst., Izmir (Turkey); Hepbasli, A. [Ege Univ., Dept. of Mechanical Engineering, Izmir (Turkey)

    2003-03-15

    Turkey is abundant in terms of renewable energy resources. Residential and industrial utilization of solar energy started in the 1980s, while the first Build-Operate-Transfer (BOT) windmill park, located at Alacati, Izmir, was commissioned in 1998. Additionally, power generation through solar-wind hybrid systems has recently appeared on the Turkish market. This study investigates the wind and solar thermal power availability in Izmir, located in the western part of Turkey. Simple models were developed to determine wind, solar, and hybrid power resources per unit area. Experimental data, consisting of hourly records over a 5 yr period, 1995-1999, were measured in the Solar/Wind Meteorological Station of the Solar Energy Institute at Ege University. Correlations between solar and wind power data were carried out on an hourly, a daily, and a monthly basis. It can be concluded that possible applications of hybrid systems could be considered for the efficient utilization of these resources. (Author)

  6. Experimental and simulation study on the plate absorber for hybrid heat pump system

    Energy Technology Data Exchange (ETDEWEB)

    An, Seung Sun; Jung, Chung Woo; Kang, Yong Tae [Kyung Hee University, Yongin (Korea, Republic of); Kim, Min Sung; Park, Seong Ryong [KIER, Daejeon (Korea, Republic of); Kang, Chae Dong [Chonbuk National University, Jeonju (Korea, Republic of)

    2013-12-15

    This research conducts an experiment for a hybrid heat pump system, using ammonia-water as a working fluid, to obtain a hot water of about 80 .deg. C. The hybrid heat pump system is the combination of vapor compression cycle and absorption cycle to improve the performance of the heat pump system. The hybrid heat pump system uses a low temperature heat source of about 50 .deg. C from the industrial waste heat. The system consists of absorber, desorber, solution heat exchanger, oil heat exchanger, rectifier, compressor and a solution pump. Parametric analysis is carried out experimentally and numerically for the key parameters such as the capacity of the absorber, the internal pressure change. From the present experimental study, it is found that the maximum hot water temperature is obtained to be 79.33 .deg. C.

  7. Comparative studies on testicular and epididymal morphology, and serum hormone concentrations in foxes and the hybrids during the breeding season.

    Science.gov (United States)

    Yang, T A; Yang, Y H; Peng, Y H; Cong, B; Diao, Y F; Bao, K; Hu, P F; Song, X C; Liu, L L; Yang, Y F; Xing, X M; Yang, F H

    2016-05-01

    The silver fox and the blue fox belong to different genera, and the hybrid males are fully or partially sterile. In the present study, the objective was to evaluate the causes of hybrid male sterility, and therefore analyze the differences in testicular, and epididymal morphology and serum hormone concentrations among silver foxes, blue foxes, and the hybrids during the breeding season. Samples were collected from 20 male silver foxes, 20 male blue foxes, 15 male HSBs (silver fox female × blue fox male hybrids) and 14 male HBSs (blue fox male × silver fox female hybrids), respectively. Seminal evaluation showed large numbers of sperm present in the semen of blue foxes and silver foxes, but no sperm present in the hybrids. Mean testicular volume and the diameter of seminiferous tubules in silver foxes and blue foxes were greater than in the hybrids; and there were many Sertoli cells, spermatogenic cells, and sperm in silver foxes and blue foxes, while spermatogenic cells decreased with no sperm in the hybrids. Mean serum LH and prolactin concentrations in silver foxes and blue foxes were less and testosterone was greater than in the hybrids (P<0.05). The results indicate that germ cell meioses in the hybrids were arrested at the prophase stage of meiosis, and that lesser concentrations of testosterone and greater concentrations of LH and prolactin can inhibit the completion of spermatogenesis. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Hybrid Combined Cycles with Biomass and Waste Fired Bottoming Cycle - a Literature Study

    Energy Technology Data Exchange (ETDEWEB)

    Petrov, Miroslav P.

    2002-02-01

    Biomass is one of the main natural resources in Sweden. The present low-CO{sub 2} emission characteristics of the Swedish electricity production system (hydro and nuclear) can be retained only by expansion of biofuel applications for energy purposes. Domestic Swedish biomass resources are vast and renewable, but not infinite. They must be utilized as efficiently as possible, in order to make sure that they meet the conditions for sustainability in the future. Application of efficient power generation cycles at low costs is essential for meeting this challenge. This applies also to municipal solid waste incineration with energy extraction, which should be preferred to its dumping in landfills. Hybrid dual-fuel combined cycle units are a simple and affordable way to increase the electric efficiency of biofuel energy utilization, without big investments, uncertainties or loss of reliability arising from complicated technologies. Configurations of such power cycles are very flexible and reliable. Their potential for high electric efficiency in condensing mode, high total efficiency in combined heat and power mode and unrivalled load flexibility is explored in this project. The present report is a literature study that concentrates on certain biomass utilization technologies, in particular the design and performance of hybrid combined cycle power units of various configurations, with gas turbines and internal combustion engines as topping cycles. An overview of published literature and general development trends on the relevant topic is presented. The study is extended to encompass a short overview of biomass utilization as an energy source (focusing on Sweden), history of combined cycles development with reference especially to combined cycles with supplementary firing and coal-fired hybrid combined cycles, repowering of old steam units into hybrid ones and combined cycles for internal combustion engines. The hybrid combined cycle concept for municipal solid waste

  9. Study of applying a hybrid standalone wind-photovoltaic generation system

    Directory of Open Access Journals (Sweden)

    Aissa Dahmani

    2015-01-01

    Full Text Available The purpose of this paper is the study of applying a hybrid system wind/photovoltaic to supply a community in southern Algeria. Diesel generators are always used to provide such remote regions with energy. Using renewable energy resources is a good alternative to overcome such pollutant generators. Hybrid Optimization Model for Electric Renewable (HOMER software is used to determine the economic feasibility of the proposed configuration. Assessment of renewable resources consisting in wind and solar potentials, load profile determination and sensitivity of different parameters analysis were performed. The cost of energy (COE of 0.226 $/kWh is very competitive with those found in literature.

  10. Study of statistical properties of hybrid statistic in coherent multi-detector compact binary coalescences Search

    OpenAIRE

    Haris, K; Pai, Archana

    2015-01-01

    In this article, we revisit the problem of coherent multi-detector search of gravitational wave from compact binary coalescence with Neutron stars and Black Holes using advanced interferometers like LIGO-Virgo. Based on the loss of optimal multi-detector signal-to-noise ratio (SNR), we construct a hybrid statistic as a best of maximum-likelihood-ratio(MLR) statistic tuned for face-on and face-off binaries. The statistical properties of the hybrid statistic is studied. The performance of this ...

  11. Study of an analog/logic processor for the design of an auto patch hybrid computer

    International Nuclear Information System (INIS)

    Koched, Hassen

    1976-01-01

    This paper presents the experimental study of an analog multiprocessor designed at SES/CEN-Saclay. An application of such a device as a basic component of an auto-patch hybrid computer is presented. First, the description of the processor, and a presentation of the theoretical concepts which governed the design of the processor are given. Experiments on an hybrid computer are then presented. Finally, different systems of automatic patching are presented, and conveniently modified, for the use of such a processor. (author) [fr

  12. Are fish immune systems really affected by parasites? an immunoecological study of common carp (Cyprinus carpio

    Directory of Open Access Journals (Sweden)

    Flajšhans Martin

    2011-06-01

    Full Text Available Abstract Background The basic function of the immune system is to protect an organism against infection in order to minimize the fitness costs of being infected. According to life-history theory, energy resources are in a trade-off between the costly demands of immunity and other physiological demands. Concerning fish, both physiology and immunity are influenced by seasonal changes (i.e. temporal variation associated to the changes of abiotic factors (such as primarily water temperature and interactions with pathogens and parasites. In this study, we investigated the potential associations between the physiology and immunocompetence of common carp (Cyprinus carpio collected during five different periods of a given year. Our sampling included the periods with temporal variability and thus, it presented a different level in exposure to parasites. We analyzed which of two factors, seasonality or parasitism, had the strongest impact on changes in fish physiology and immunity. Results We found that seasonal changes play a key role in affecting the analyzed measurements of physiology, immunity and parasitism. The correlation analysis revealed the relationships between the measures of overall host physiology, immunity and parasite load when temporal variability effect was removed. When analyzing separately parasite groups with different life-strategies, we found that fish with a worse condition status were infected more by monogeneans, representing the most abundant parasite group. The high infection by cestodes seems to activate the phagocytes. A weak relationship was found between spleen size and abundance of trematodes when taking into account seasonal changes. Conclusions Even if no direct trade-off between the measures of host immunity and physiology was confirmed when taking into account the seasonality, it seems that seasonal variability affects host immunity and physiology through energy allocation in a trade-off between life important

  13. Comprehensive phylogenetic analysis of all species of swordtails and platies (Pisces: Genus Xiphophorus) uncovers a hybrid origin of a swordtail fish, Xiphophorus monticolus, and demonstrates that the sexually selected sword originated in the ancestral lineage of the genus, but was lost again secondarily.

    Science.gov (United States)

    Kang, Ji Hyoun; Schartl, Manfred; Walter, Ronald B; Meyer, Axel

    2013-01-29

    Males in some species of the genus Xiphophorus, small freshwater fishes from Meso-America, have an extended caudal fin, or sword - hence their common name "swordtails". Longer swords are preferred by females from both sworded and - surprisingly also, non-sworded (platyfish) species that belong to the same genus. Swordtails have been studied widely as models in research on sexual selection. Specifically, the pre-existing bias hypothesis was interpreted to best explain the observed bias of females in presumed ancestral lineages of swordless species that show a preference for assumed derived males with swords over their conspecific swordless males. However, many of the phylogenetic relationships within this genus still remained unresolved. Here we construct a comprehensive molecular phylogeny of all 26 known Xiphophorus species, including the four recently described species (X. kallmani, X. mayae, X. mixei and X. monticolus). We use two mitochondrial and six new nuclear markers in an effort to increase the understanding of the evolutionary relationships among the species in this genus. Based on the phylogeny, the evolutionary history and character state evolution of the sword was reconstructed and found to have originated in the common ancestral lineage of the genus Xiphophorus and that it was lost again secondarily. We estimated the evolutionary relationships among all known species of the genus Xiphophorus based on the largest set of DNA markers so far. The phylogeny indicates that one of the newly described swordtail species, Xiphophorus monticolus, is likely to have arisen through hybridization since it is placed with the southern platyfish in the mitochondrial phylogeny, but with the southern swordtails in the nuclear phylogeny. Such discordance between these two types of markers is a strong indication for a hybrid origin. Additionally, by using a maximum likelihood approach the possession of the sexually selected sword trait is shown to be the most likely

  14. Comprehensive phylogenetic analysis of all species of swordtails and platies (Pisces: Genus Xiphophorus uncovers a hybrid origin of a swordtail fish, Xiphophorus monticolus, and demonstrates that the sexually selected sword originated in the ancestral lineage of the genus, but was lost again secondarily

    Directory of Open Access Journals (Sweden)

    Kang Ji Hyoun

    2013-01-01

    Full Text Available Abstract Background Males in some species of the genus Xiphophorus, small freshwater fishes from Meso-America, have an extended caudal fin, or sword – hence their common name “swordtails”. Longer swords are preferred by females from both sworded and – surprisingly also, non-sworded (platyfish species that belong to the same genus. Swordtails have been studied widely as models in research on sexual selection. Specifically, the pre-existing bias hypothesis was interpreted to best explain the observed bias of females in presumed ancestral lineages of swordless species that show a preference for assumed derived males with swords over their conspecific swordless males. However, many of the phylogenetic relationships within this genus still remained unresolved. Here we construct a comprehensive molecular phylogeny of all 26 known Xiphophorus species, including the four recently described species (X. kallmani, X. mayae, X. mixei and X. monticolus. We use two mitochondrial and six new nuclear markers in an effort to increase the understanding of the evolutionary relationships among the species in this genus. Based on the phylogeny, the evolutionary history and character state evolution of the sword was reconstructed and found to have originated in the common ancestral lineage of the genus Xiphophorus and that it was lost again secondarily. Results We estimated the evolutionary relationships among all known species of the genus Xiphophorus based on the largest set of DNA markers so far. The phylogeny indicates that one of the newly described swordtail species, Xiphophorus monticolus, is likely to have arisen through hybridization since it is placed with the southern platyfish in the mitochondrial phylogeny, but with the southern swordtails in the nuclear phylogeny. Such discordance between these two types of markers is a strong indication for a hybrid origin. Additionally, by using a maximum likelihood approach the possession of the sexually

  15. Bioavailability of selenium from fish, yeast and selenate: A comparative study in humans using stable isotopes

    NARCIS (Netherlands)

    Fox, T.E.; Heuvel, E.G.H.M. van den; Atherton, C.A.; Dainty, J.R.; Lewis, D.J.; Langford, N.J.; Crews, H.M.; Luten, J.B.; Lorentzen, M.; Sieling, F.W.; Aken-Schneyder, P. van; Hoek, M.; Kotterman, M.J.J.; Dael, P. van; Firweather-Tail, S.J.

    2004-01-01

    Objective: To measure the bioavailability of selenium from cooked and raw fish in humans by estimating and comparing apparent absorption and retention of selenium in biosynthetically labelled fish with labelled selenate and biosynthetically labelled selenium in brewers yeast. Design: The

  16. Bioavailibility of selenium from fish, yeast and selenate: a comparative study in humans using stable isotopes

    NARCIS (Netherlands)

    Fox, T.E.; Heuvel, van den E.G.H.M.; Atherton, C.A.; Luten, J.B.; Hoek-van Nieuwenhuizen, van M.; Kotterman, M.J.J.

    2004-01-01

    Objective: To measure the bioavailability of selenium from cooked and raw fish in humans by estimating and comparing apparent absorption and retention of selenium in biosynthetically labelled fish with labelled selenate and biosynthetically labelled selenium in brewers yeast. Design: The

  17. A study of fish behaviour in the extension of a demersal trawl using a multi-compartment separator frame and SIT camera system

    DEFF Research Database (Denmark)

    Krag, Ludvig Ahm; Madsen, Niels; Karlsen, Junita

    2009-01-01

    A rigid separator frame with three vertically stacked codends was used to study fish behaviour in the extension piece of a demersal trawl. A video camera recorded fish as they encountered the separator frame. Ten hauls were conducted in a mixed species fishery in the northern North Sea. Fish...

  18. Study of hydrogen engine for a hybrid electric vehicle. 1; Hybrid denki jidoshayo suiso engine ni kansuru kenkyu. 1

    Energy Technology Data Exchange (ETDEWEB)

    Iguchi, T.; Numata, T. Hiruma, M.; Yamane, K.; Nakajima, Y.; Furuhama, S. [Musashi Institute of Technology, Tokyo (Japan); Takagi, Y. [Nissan Motor Co. Ltd., Tokyo (Japan)

    1998-10-15

    Study was made on application of a hydrogen engine to series hybrid electric vehicle (SHEV). Power of 20kW (for steady driving of a vehicle of 1t in total weight on flat road surface at 100km/h), and NOx emission concentration equivalent to that of EZEV (equivalent zero emission vehicle) were used as target performance. One of the merits of using a hydrogen engine for HEV is that conventional high-reliability gasoline engines can be used as hydrogen engines only by a bit of modification. A modified conventional 4-cylinder 4-cycle gasoline engine was used for this study. Hydrogen gas was continuously supplied through an intake manifold for premixed combustion by spark ignition. Brake thermal efficiency was improved from 30.5% to 35.5% by use of a high compression ratio and reduction of friction loss. NOx emission concentration could be controlled within 10ppm by ultra-lean combustion even at excess air ratios over 2.5. Both high efficiency and low emission were achieved at the same time around 3000rpm in engine revolution. 4 refs., 12 figs., 1 tab.

  19. Patterns of fish assemblage structure and dynamics in waters of the Savannah River Plant. Comprehensive Cooling Water Study final report

    Energy Technology Data Exchange (ETDEWEB)

    Aho, J.M.; Anderson, C.S.; Floyd, K.B.; Negus, M.T.; Meador, M.R.

    1986-06-01

    Research conducted as part of the Comprehensive Cooling Water Study (CCWS) has elucidated many factors that are important to fish population and community dynamics in a variety of habitats on the Savannah River Plant (SRP). Information gained from these studies is useful in predicting fish responses to SRP operations. The overall objective of the CCWS was (1) to determine the environmental effects of SRP cooling water withdrawals and discharges and (2) to determine the significance of the cooling water impacts on the environment. The purpose of this study was to: (1) examine the effects of thermal plumes on anadromous and resident fishes, including overwintering effects, in the SRP swamp and associated tributary streams; (2) assess fish spawning and locate nursery grounds on the SRP; (3) examine the level of use of the SRP by spawning fish from the Savannah River, this objective was shared with the Savannah River Laboratory, E.I. du Pont de Nemours and Company; and (4) determine impacts of cooling-water discharges on fish population and community attributes. Five studies were designed to address the above topics. The specific objectives and a summary of the findings of each study are presented.

  20. Helminth parasites of South American fishes: current status and characterization as a model for studies of biodiversity.

    Science.gov (United States)

    Luque, J L; Pereira, F B; Alves, P V; Oliva, M E; Timi, J T

    2017-03-01

    The South American subcontinent supports one of the world's most diverse and commercially very important ichthyofauna. In this context, the study of South American fish parasites is of increased relevance in understanding their key roles in ecosystems, regulating the abundance or density of host populations, stabilizing food webs and structuring host communities. It is hard to estimate the number of fish parasites in South America. The number of fish species studied for parasites is still low (less than 10%), although the total number of host-parasite associations (HPAs) found in the present study was 3971. Monogeneans, with 835 species (1123 HPAs, 28.5%), and trematodes, with 662 species (1127 HPAs, 30.9%), are the more diverse groups. Data gathered from the literature are useful to roughly estimate species richness of helminths from South American fish, even though there are some associated problems: the reliability of information depends on accurate species identification; the lack of knowledge about life cycles; the increasing number of discoveries of cryptic species and the geographically biased number of studies. Therefore, the closest true estimations of species diversity and distribution will rely on further studies combining both molecular and morphological approaches with ecological data such as host specificity, geographical distribution and life-cycle data. Research on biodiversity of fish parasites in South America is influenced by problems such as funding, taxonomic impediments and dispersion of research groups. Increasing collaboration, interchange and research networks in the context of globalization will enable a promising future for fish parasitology in South America.

  1. Hybridization study of wild rice Oryza glumaepatula with varieties of cultivated rice (O. sativa) and wild (O. grandiglumis)

    International Nuclear Information System (INIS)

    Villalobos Cascante, Eddier

    2015-01-01

    The process of interspecific hybridization of the wild species O. glumaepatula is studied with commercial varieties of the species O. sativa and O. grandiglumis, by morphological evaluation and hybrid flow cytometry. Hybrid plants were evaluated of cross between O. glumaepatula, located in the wetlands of Rio Medio Queso and two varieties of O. sativa, Puita Inta and CFX 18 resistant to a herbicide. The technique of Polymerase Chain Reaction Allele Specifies Oligonucleotide (PCR-ASO) was used to detect allelic mutations in the ALS gene conferring herbicide resistance, and it is confirmed the hybrid nature of the plants obtained at crossings. 68 hybrids were obtained: O. glumaepatula x P. Inta, 21 hybrids P. Inta x O. glumaepatula, 4 hybrids O. glumaepatula x CFX-18 and 15 hybrids CFX-18 x O. glumaepatula. 10 morphological descriptors of the genus Oryza were evaluated and determined that are indifferent to the direction and type of crossing, the hybrids resemble to the wild species O. glumaepatula for characters: height, panicle length and ligule length. All hybrids have showed similarity to commercial varieties in flag leaf length. Other characters evaluated in the hybrids have presented maternal effect, heterosis and intermediate values. The protocol of flow cytometry (FCM) is standardized species for Oryza genus analyzing nuclear DNA content of 106 samples of leaf tissue of wild species O. glumaepatula, O. grandiglumis; whose average has been of 0.73 picograms, and natural hybrids product of the cross of these species. The result has been intermediate compared with O. grandiglumis and O. glumaepatula that have made available to 1.0 picograms and 0.50 of DNA respectively. The molecular nature of the hybrids was confirmed in this way. (author) [es

  2. Molecular studies of segmental aneusomy: FISHing for the atypical cry in del(5)(p15.3).

    Science.gov (United States)

    Hodge, J C; Lawson-Yuen, A; Stoler, J M; Ligon, A H

    2007-01-01

    We report a newborn male with multiple congenital anomalies including growth retardation, hypotonia, dysmorphic facies, widely-spaced nipples, micropenis, cryptorchidism, optic nerve hypoplasia, heart disease, and a striking, high-pitched cry. Chromosome analysis revealed de novo partial trisomy 11q due to a der(5)t(5;11)(p15.3;q22). Fluorescence in situ hybridization (FISH) showed loss of the 5p telomere signal on the der(5) chromosome, indicating the infant has partial monosomy 5p in addition to partial trisomy 11q. Among cases involving trisomy 11q, an unusual cry has only been documented in the presence of a der(5)t(5p;11q). This apparent dependence of the abnormal cry on monosomy 5p suggested the same genetic mechanism that occurs in Cri du chat syndrome (CDCS) may be responsible for the atypical cry in der(5)t(5p;11q) individuals. Neither a commercial CDCS probe (LSI D5S23, D5S721) nor a series of BAC clones encompassing distal regions implicated in the CDCS-associated cat-cry were deleted in our patient. These results suggest a second cry-modifying locus maps telomeric to BAC RP11-94J21 in band 5p15.33. This locus may not only cause the abnormal cry in individuals with a der(5)t(5p;11q) but could also contribute to the phenotypic variability and discordant mapping studies observed for CDCS. Copyright (c) 2007 S. Karger AG, Basel.

  3. Consumer purchasing behaviour towards fish and seafood products. Patterns and insights from a sample of international studies.

    Science.gov (United States)

    Carlucci, Domenico; Nocella, Giuseppe; De Devitiis, Biagia; Viscecchia, Rosaria; Bimbo, Francesco; Nardone, Gianluca

    2015-01-01

    The present systematic review was performed to assess consumer purchasing behaviour towards fish and seafood products in the wide context of developed countries. Web of Science, Scopus, ScienceDirect and Google Scholar engines were used to search the existing literature and a total of 49 studies were identified for inclusion. These studies investigated consumer purchasing behaviour towards a variety of fish and seafood products, in different countries and by means of different methodological approaches. In particular, the review identifies and discusses the main drivers and barriers of fish consumption as well as consumers' preferences about the most relevant attributes of fish and seafood products providing useful insights for both practitioners and policy makers. Finally, main gaps of the existing literature and possible trajectories for future research are also discussed. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. A Brief History of the Study of Fish Osmoregulation: The Central Role of the Mt. Desert Island Biological Laboratory

    Science.gov (United States)

    Evans, David H.

    2010-01-01

    The Mt. Desert Island Biological Laboratory (MDIBL) has played a central role in the study of fish osmoregulation for the past 80 years. In particular, scientists at the MDIBL have made significant discoveries in the basic pattern of fish osmoregulation, the function of aglomerular kidneys and proximal tubular secretion, the roles of NaCl cotransporters in intestinal uptake and gill and rectal gland secretion, the role of the shark rectal gland in osmoregulation, the mechanisms of salt secretion by the teleost fish gill epithelium, and the evolution of the ionic uptake mechanisms in fish gills. This short review presents the history of these discoveries and their relationships to the study of epithelial transport in general. PMID:21423356

  5. FISH studies in a girl with sporadic aniridia and an apparently balanced de novo t(11;13)(p13;q33) translocation detect a microdeletion involving the WAGR region

    OpenAIRE

    J.C. Llerena Jr.; J.C. Cabral de Almeida; E. Bastos; J.A. Crolla

    2000-01-01

    Conventional cytogenetic studies on a female infant with sporadic aniridia revealed what appeared to be a balanced de novo t(11;13) (p13;q33) translocation. Fluorescence in situ hybridization (FISH) investigations, however, detected the presence of a cryptic 11p13p14 deletion which included the WAGR region and involved approximately 7.5 Mb of DNA, including the PAX6 and WT1 genes. These results account for the patient's aniridia, and place her at high risk for developing Wilms' tumour. The ab...

  6. Innovation in utilization of fish tanks for fish culture among fish ...

    African Journals Online (AJOL)

    This study investigated innovation in utilization of fish tanks for fish culture among fish farmers in Obio/Akpor Local Government Area of Rivers State, Nigeria. Data for this study was obtained through the administration of questionnaire and scheduled interview to 120 sampled fish farmers randomly selected from the study ...

  7. Chronic granulomatous inflammation in teleost fish Piaractus mesopotamicus: histopathology model study

    Directory of Open Access Journals (Sweden)

    Wilson G Manrique

    2017-01-01

    Full Text Available Objective. This study evaluated the cell kinetic and formation of granuloma during chronic inflammation induced by Bacillus Calmette-Guérin (BCG in the skeletal muscle of Piaractus mesopotamicus, as a histopathology model to study innate immunity. Materials and methods. Sixty fish were divided in two groups: BCG-inoculated and non-inoculated fish and the inflammatory response analyzed 3, 7, 14, 21 and 33 days post-inoculation (DPI by histopathology after hematoxylin-eosin and Ziehl-Neelsen staining. Results. 3 DPI of BCG showed a diffuse inflammatory reaction mostly composed by mononuclear cells. The inflammation continued diffuse 7 DPI initiating the cellular organization surrounding the inoculum and have continued at 14 DPI with discrete presence of epithelioid-like type cells with acidophilic cytoplasm and floppy chromatin. Higher cellular organization (21 DPI surrounding the granuloma with intense peripheral mononuclear inflammatory infiltrate and nevertheless, an increase in the number of fibroblasts and macrophage-like cells was observed. The inflammatory process became less diffuse 33 DPI with formation of small amount of granuloma surrounded by the same type of reaction found in bigger granuloma. Both the young and old granuloma presented typical characteristic around the inoculum composed by a layer of epithelioid-like type cells, besides macrophages, some lymphocytes and abundant fibroblasts. Conclusions. This study showed the feasibility in the use of pacus to study chronic granulomatous inflammatory response induced by BCG, characterized by changes in the kinetics of inflammatory cells in skeletal muscle classifying as immune-epithelioid type, similar to granulomatous inflammation caused by M. marinum in teleost fish.

  8. Rapid detection of chromosome rearrangement in medical diagnostic X-ray workers by using fluorescence in situ hybridization and study on dose estimation

    International Nuclear Information System (INIS)

    Wang Zhiquan; Sun Yuanming; Li Jin

    1998-01-01

    Objective: Biological doses were estimated for medical diagnostic X-ray workers. Methods: Chromosome rearrangements in X-ray workers were analysed by fluorescence in situ hybridization (FISH) with composite whole chromosome paintings number 4 and number 7. Results: The frequency of translocation in medical diagnostic X-ray workers was much higher than that in control group (P<0.01). The biological doses to individual X-ray workers were calculated by their translocation frequency. The translocation frequencies of both FISH and G-banding were in good agreement. Conclusion: The biological doses to X-ray workers are estimated by FISH first when their dosimetry records are not documented

  9. Studies of trace metals in fish, sediment and water from kpong reservior

    International Nuclear Information System (INIS)

    Yikpo, Wisdom Kwasi

    2014-06-01

    Water of good quality is indispensable to human survival on earth. The provision of potable water to both the rural and the urban populations is necessary to prevent health hazards. The aim of this research was to assess water quality with respect to physicochemical parameters and trace metals levels in the water, the sediment and the fish species from the Kpong Reservoir on the Lower Volta River. The water, the sediment and the fish samples were collected monthly for six (6) months from November 2011 to February 2012 (dry season) and from May to July 2012 ( wet season). The water, the sediment and the fish samples were analyzed for Hg, Se, Fe, Mn and Pb using Atomic Absorption spectroscopy (AAS). Mercury was determined using a cold vapour technique with the AAS equipped with a hydride generator. Selenium was also determined by hydride generation. A mixture of nitric acid (HNO3 65%), hydrochloric acid ( HCl 35%) and hydrogen peroxide (H2O2 30%) was used for complete oxidation of the organic sample in a fume chamber. The samples were loaded on a Milestone microwave Labstation ETHOS 900, INSTR:MLS -1200 MEGA. The results of this study showed that there were significant differences in concentrations of the physicochemical parameters between the two seasons. Domestic, municipal and Agricultural waste might have contributed to the release of higher contaminants into the sediment in both seasons. Coefficients of variation for the physicochemical parameters were below 50%, while iron and lead in addition to phosphate and sulphate were more than 50%. The mean concentration of trace metals in the water were 0.008 mg/L for Hg, 0.0035 mg/L for Se, 0.255 mg/L for Fe, 0.087 mg/L for Mn and 0.135 mg/L for Pb. Levels of all trace metals were below the WHO guideline values, except Pb which exceeded at 0.05 mg/L. Levels of nutrients were also below the WHO guideline value except phosphate which recorded a standard deviation of ±0.02 for the WHO guideline value of 0.3 mg/ L. The

  10. Factors Which Influence The Fish Purchasing Decision: A study on Traditional Market in Riau Mainland

    Science.gov (United States)

    Siswati, Latifa; Putri, Asgami

    2018-05-01

    The purposes of the research are to analyze and assess the factors which influence fish purchasing by the community at Tenayan Raya district Pekanbaru.Research methodology which used is survey method, especially interview and observation technique or direct supervision on the market which located at Tenayan Raya district. Determination technique of sampling location/region is done by purposive sampling. The sampling method is done by accidental sampling. Technique analysis of factors which used using the data that derived from the respondent opinion to various fish variable. The result of this research are the factors which influence fish purchasing decision done in a traditional market which located at Tenayan Raya district are product factor, price factors, social factor and individual factor. Product factor which influences fish purchasing decision as follows: the eyelets condition, the nutrition of fresh fish, the diversity of sold fish. Price factors influence the fish purchasing decision, such as: the price of fresh fish, the convincing price and the suitability price and benefits of the fresh fish. Individual factors which influence a fish purchasing decision, such as education and income levels. Social factors which influence a fish purchasing decision, such as family, colleagues and feeding habits of fish.

  11. Experimental study of parametric decay close to the upper hybrid frequency

    Energy Technology Data Exchange (ETDEWEB)

    Albers, E; Krause, K; Schlueter, H [Ruhr-Univ., Bochum (Germany, F.R.)

    1978-04-01

    In He, Ne, and Ar plasmas the parametric decay of the electromagnetic upper hybrid mode is studied in the range between the electron cyclotron frequency and its first two harmonics. The pump wave is excited by outside antennae. The decay products are identified as electron Bernstein and ion acoustic modes.

  12. Parametric study of lower-hybrid current drive in the FED-A design

    International Nuclear Information System (INIS)

    Iida, H.; Ehst, D.A.; Peng, Y.K.M.

    1983-08-01

    In the FED-A concept, a quasi-steady-state operating scenario is conceived in which the plasma current is maintained by the transformer coil during burn at high density and by the lower hybrid wave during transformer recharge at low density. A parametric study is carried out to obtain optimum plasma and wave parameters in the recharging phase

  13. Role of immunohistochemistry and fluorescence in-situ hybridization (FISH in the diagnosis of spindle and round cell tumors of the kidney

    Directory of Open Access Journals (Sweden)

    M. Abbas

    2015-09-01

    Conclusion: In summary we advise an immunohistochemical panel for round/spindle cell tumors of the kidney and for unclear cases we advise to add (FISH to get the correct diagnosis, as they are completely different regarding surgical approach and post-operative adjuvant therapy.

  14. Blood mercury concentration, fish consumption and anthropometry in Chinese children: A national study.

    Science.gov (United States)

    Gao, Zhen-Yan; Li, Min-Ming; Wang, Ju; Yan, Jin; Zhou, Can-Can; Yan, Chong-Huai

    2018-01-01

    This study sought to obtain national cross-sectional data for blood mercury levels and risk factors for mercury exposure in Chinese children aged 0 to 6years to provide evidence to support preventive measures for reducing childhood blood mercury levels. A multi-stage, stratified, clustered random sampling survey was conducted May 2013-Mar 2015. Shanghai, Jilin, Shanxi, Guangdong, Qinghai, Yunnan and Hubei, which are located in seven different geographical regions in China, were selected as the study field. A total of 14,202 children aged 0-6years participated in the study. Whole-blood venous samples (3ml) were collected from the subjects for mercury exposure assessment. The DMA-80 was applied for mercury detection, and a health questionnaire gathering information on related confounders was completed by the subjects' parents of the subjects after they received guidance from the investigators. A general linear model was used for the primary descriptive statistical analysis. Odds ratios (ORs) and 95%CIs for the risk factors were estimated using unconditional logistic regression. A total of 14,202 eligible samples were collected. The mean mercury level was 1.39μg/L. Other results were as follows: median 1.23μg/L, p25 0.86μg/L, p75 1.73μg/L, and GM 1.10μg/L. Of the seven geographical regions, Qinghai, in northwestern China, had a median mercury level of 0.37μg/L, which was significantly lower than the mercury level in Guangdong, in southeastern China (2.01μg/L). The median blood mercury level of children in suburban areas was 1.34μg/L, which was remarkably higher than that of children in rural areas (1.09μg/L). Dichotomous subgroups were generated using the median mercury concentration. Unconditional logistic regression analysis revealed that fish consumption may contribute to increased blood mercury levels (pmercury concentrations and the children's anthropometric characteristics (BMI; pmercury concentrations among Chinese children aged 0-6years were

  15. Environmental changes on freshwater fish communities in South America in the last five decades: a case study in northeast Argentina.

    Directory of Open Access Journals (Sweden)

    Alejandra Volpedo

    2017-01-01

    Full Text Available Environmental changes together with other stressors, such as habitat destruction, may cause widespread extinctions, decrease in biodiversity and disrupt natural communities, resulting in novel species assemblages. South America has a large diversity of freshwater fishes with complex evolutionary histories, mainly due to the presence of a wide variety of aquatic environments. Argentina has experienced an increase in rainfall in the last five decades leading to important climatic and hydrological changes. These changes caused the displacement of the isohyets towards the west. This study reports changes in the composition of freshwater fishes in northeast Argentina during the last five decades, and investigated a causal relationship between the variation in fish assemblages and climate change. The changes in the distribution and composition of fish communities between 1962 and 2010 were analyzed in 22 stations. These stations were agrouped in relation to the ichthyogeographic provinces: Great Rivers province (GRp and Pampean province (Pp. The correlation between rainfall in relation to the number total species from each of the studied provinces showed a significant positive correlation in Pp and not correlation in GRp. The annual mean river discharge and the number of total species from each ecoregion showed a significant positive correlation in GRp, and not correlation in Pp. The results of this study strongly suggest that the rainfall variations and river discharges observed in northeast Argentina induced changes in the composition of fish assemblages that lead to the redistribution of fish species among ichthyogeographic provinces.

  16. A Eulerian nutrient to fish model of the Baltic Sea — A feasibility-study

    Science.gov (United States)

    Radtke, Hagen; Neumann, Thomas; Fennel, Wolfgang

    2013-09-01

    A nutrient-to-fish-model with an explicit two-way interaction between a biogeochemical model of the lower food web and a fish model component is presented for the example of the Baltic Sea, demonstrating the feasibility of a consistent coupling of the upper and lower parts of the food web in a Eulerian model system. In the Baltic Sea, the fish stock is dominated by two prey species (sprat and herring) and one predator (cod). The dynamics of the fish model is driven by size (mass-class) dependent predator-prey interactions while the interaction between the biogeochemical and Fish model component is established through feeding of prey fish on zooplankton and recycling of fish biomass to nutrients and detritus. The fish model component is coupled to an advanced three dimensional biogeochemical model (ERGOM, Neumann et al., 2002). A horizontally explicit representation of fish requires the implementation of fish behavior. As a first step, we propose an algorithm to stimulate fish migration by letting the fish follow the food. Moreover, fish species are guided to their respective spawning areas. Results of first three-dimensional simulations are presented with emphasis on the transport of matter by moving fish. The spawning areas of cod and sprat are in the deep basins, which are not well reached by advective transport. Hence the deposition of matter in these areas by spawning fish could play some role in the distribution of matter. The approach is not limited to applications for the Baltic and the model can be transferred also to other systems.

  17. Stirling engine electric hybrid vehicle propulsion system conceptual design study. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Dochat, G; Artiles, A; Killough, J; Ray, A; Chen, H S

    1978-08-01

    Results of a six-month study to characterize a series Stirling engine electric hybrid vehicle propulsion system are presented. The Stirling engine was selected as the heat conversion element to exploit the high efficiency (> .36), low pollution, multi-fuel and quiet operation of this machine. A free-piston Stirling engine driving a linear alternator in a hermatically sealed enclosure was chosen to gain the reliability, long life, and maintenance free characteristics of a sealed unit. The study performs trade off evaluations, selection of engine, battery, motor and inverter size, optimization of components, and develops a conceptual design and characterization of the total propulsion system. The conclusion of the study is that a Stirling engine electric hybrid propulsion system can be used successfully to augment the battery storage of a passenger vehicle and will result in significant savings of petroleum energy over present passenger vehicles. The performance and range augmentation of the hybrid design results in significant improvements over an all electric vehicle. The hybrid will be capable of performing 99% of the passenger vehicle annual trip distribution requirements with extremely low fuel usage. (TFD)

  18. Fish irradiation

    International Nuclear Information System (INIS)

    Kovacs, J.; Tengumnuay, C.; Juangbhanich, C.

    1970-01-01

    Chub-mackerel was chosen for the study because they are the most common fish in Thailand. Preliminary investigations were conducted to determine the maximum radiation dose of gamma-rays by organoleptic tests. The samples were subjected to radiation at various doses up to 4 Mrad. Many experiments were conducted using other kinds of fish. The results showed that 1 Mrad would be the maximum acceptable dose for fish. Later, the influence of the radiation dose from 0.1-1 Mrad was studied in order to find the optimum acceptable dose for preservation of fish without off-flavour. For this purpose, the Hedonic scale was used. It was found that 0.2 and 0.5 Mrad gave the best result on Chub mackerel. The determinations of optimum dose, organoleptic, microbiological and trimethylamine content changes were done. The results showed that Chub mackerel irradiated at 0.2, 0.5 and 1 Mrad stored at 3 0 C for 71 days were still acceptable, on the contrary the untreated samples were found unacceptable at 14 days. The trimethylamine increment was significantly higher in the untreated samples. At 15 days storage, trimethylamine in the non-irradiated Chub-mackerel was about 10 times higher than the irradiated ones. At 51 and 79 days storage, about 13 times higher in the control samples than the irradiated samples except 0.1 Mrad. Only 2 times higher was found for the 0.1 Mrad. The microbiological results showed that the irradiation above 0.2 Mrad gave favorable extension of shelf-life of fish

  19. STUDY ON THE THERMAL STABILITY OF EPA AND DHA IN MUJAHIR (Oreochromis mossambicus FISH OIL

    Directory of Open Access Journals (Sweden)

    Ngatidjo Hadipranoto

    2010-06-01

    Full Text Available EPA (Eicosapentaenoic acid and DHA (Docosahexaenoic acid content in common fresh water fish : mujahir (Oreochromis mossambicus after indirect heating were analysed. The aims of this study were to determine the effect of indirect heating process and α-tocopherol additions on both fatty acid stability.Lipids content in the mujahir fillets were extracted by Folch method using chloroform-metanol (2:1 mixture. Fatty acids in fish oil were converted to fatty acid methyl esters and then injected into gas chromatography to determine the EPA and DHA concentration. Operating condition of gas chromatography were programmed as follows: injection port temperature at 270 oC, detector at 280 oC, initial column temperature at 200 oC, and the final at 280 oC, the carrier gas was helium with flow rate of 10 ml per minute and temperature of column was increased gradually at 10 oC per minute. The effect of α-tocopherol addition on the stability of EPA and DHA was studied by adding α-tocopherol at 50 to 200 mg per kilogram sample before indirect heating process was carried out.The analysis of mujahir fish oil showed that the content of EPA and DHA in 100 grams fresh sample was 105 and 406,5 mg respectivelly. Indirect heating caused the EPA and DHA content decreased significantly. The addition of α-tocopherol results in a positive corelation between α-tocopherol concentration added and the decrease of EPA and DHA content during the heating process.   Keywords: fatty acid, eicosapentaenoic acid, docosahexaenoic acid

  20. Fish oil in infancy protects against food allergy in Iceland-Results from a birth cohort study.

    Science.gov (United States)

    Clausen, M; Jonasson, K; Keil, T; Beyer, K; Sigurdardottir, S T

    2018-01-10

    Consumption of oily fish or fish oil during pregnancy, lactation and infancy has been linked to a reduction in the development of allergic diseases in childhood. In an observational study, Icelandic children (n = 1304) were prospectively followed from birth to 2.5 years with detailed questionnaires administered at birth and at 1 and 2 years of age, including questions about fish oil supplementation. Children with suspected food allergy were invited for physical examinations, allergic sensitization tests, and a double-blind, placebo-controlled food challenge if the allergy testing or clinical history indicated food allergy. The study investigated the development of sensitization to food and confirmed food allergy according to age and frequency of postnatal fish oil supplementation using proportional hazards modelling. The incidence of diagnosed food sensitization was significantly lower in children who received regular fish oil supplementation (relative risk: 0.51, 95% confidence interval: 0.32-0.82). The incidence of challenge-confirmed food allergy was also reduced, although not statistically significant (0.57, 0.30-1.12). Children who began to receive fish oil in their first half year of life were significantly more protected than those who began later (P = .045 for sensitization, P = .018 for allergy). Indicators of allergy severity decreased with increased fish oil consumption (P = .013). Adjusting for parent education and allergic family history did not change the results. Postnatal fish oil consumption is associated with decreased food sensitization and food allergies in infants and may provide an intervention strategy for allergy prevention. © 2018 EAACI and John Wiley and Sons A/S. Published by John Wiley and Sons Ltd.

  1. Ciguatera fish poisoning in industrial ship crewmembers: a retrospective study in a seaport general practice in Trinidad and Tobago.

    Science.gov (United States)

    Poon-King, C M; Chen, A; Poon-King, T

    2004-09-01

    The objective of this study was to outline the epidemiology of Ciguatera fish poisoning as seen in a general practice serving two industrial seaports in Trinidad and Tobago, in order to highlight the potential public health implications. A retrospective study was undertaken of all the cases of Ciguatera fish poisoning identified between November 1, 1992 and October 31, 1998 in a seaport general practice to identify signs, symptoms and treatment. An investigation of one outbreak was undertaken. Four outbreaks affecting 42 male ship crewmembers were identified. The suspect fish were caught in northern Caribbean waters en route to Trinidad and Tobago. The most common early symptoms were diarrhoea, vomiting, abdominal cramps, pruritus and tiredness. In the third outbreak, dysaesthesia was common. Progression to muscular weakness, ataxic gait, unsteadiness and other neurotoxic signs were seen in moderate to severe disease. Hypotension was an important prognostic sign in the initial case. Treatment was symptomatic and supportive and included vitamins B12 and BCO, folic acid, prostigmine, steroids and antihistamines as indicated. In the investigation of the second outbreak, the relative risk of 'eating fish meat' was 5 (95% CI 1.45, 17.27, p ciguatera fish poisoning.' All cases were industrial ship crewmembers. It is suggested that increased clinician awareness with early and appropriate treatment, and focussed public health intervention may help limit the potential public health impact of ciguatera poisoning in industrial ship crewmembers and other fish-consuming communities in the future.

  2. Studies on the removal of arsenic (III) from water by a novel hybrid material

    International Nuclear Information System (INIS)

    Mandal, Sandip; Padhi, T.; Patel, R.K.

    2011-01-01

    Highlights: → The removal of As (III) is about 98% at pH 7 with the hybrid material (ZrO-EA). → The hybrid material exhibits specific surface area of 201.62 m 2 /g. → The adsorption of arsenic (III) from aqueous solution by the hybrid material is spontaneous. → The material could be easily regenerated with sodium hydroxide at pH 12. - Abstract: The present work provides a method for removal of the arsenic (III) from water. An ion-exchanger hybrid material zirconium (IV) oxide-ethanolamine (ZrO-EA) is synthesized and characterized which is subsequently used for the removal of selective arsenic (III) from water containing 10,50,100 mg/L of arsenic (III) solution. The probable practical application for arsenic removal from water by this material has also been studied. The various parameters affecting the removal process like initial concentration of As (III), adsorbent dose, contact time, temperature, ionic strength, and pH are investigated. From the data of results, it is indicated that, the adsorbent dose of 0.7 mg/L, contact time 50 min after which the adsorption process comes to equilibrium, temperature (25 ± 2), solution pH (5-7), which are the optimum conditions for adsorption. The typical adsorption isotherms are calculated to know the suitability of the process. The column studies showed 98% recovery of arsenic from water especially at low concentration of arsenic in water samples.

  3. Synthesis, Biological Evaluation, and Molecular Modeling Studies of New Oxadiazole-Stilbene Hybrids against Phytopathogenic Fungi

    Science.gov (United States)

    Jian, Weilin; He, Daohang; Song, Shaoyun

    2016-08-01

    Natural stilbenes (especially resveratrol) play important roles in plant protection by acting as both constitutive and inducible defenses. However, their exogenous applications on crops as fungicidal agents are challenged by their oxidative degradation and limited availability. In this study, a new class of resveratrol-inspired oxadiazole-stilbene hybrids was synthesized via Wittig-Horner reaction. Bioassay results indicated that some of the compounds exhibited potent fungicidal activity against Botrytis cinerea in vitro. Among these stilbene hybrids, compounds 11 showed promising inhibitory activity with the EC50 value of 144.6 μg/mL, which was superior to that of resveratrol (315.6 μg/mL). Remarkably, the considerably abnormal mycelial morphology was observed in the presence of compound 11. The inhibitory profile was further proposed by homology modeling and molecular docking studies, which showed the possible interaction of resveratrol and oxadiazole-stilbene hybrids with the cytochrome P450-dependent sterol 14α-demethylase from B. cinerea (BcCYP51) for the first time. Taken together, these results would provide new insights into the fungicidal mechanism of stilbenes, as well as an important clue for biology-oriented synthesis of stilbene hybrids with improved bioactivity against plant pathogenic fungi in crop protection.

  4. Hybrid Model of Inhomogeneous Solar Wind Plasma Heating by Alfven Wave Spectrum: Parametric Studies

    Science.gov (United States)

    Ofman, L.

    2010-01-01

    Observations of the solar wind plasma at 0.3 AU and beyond show that a turbulent spectrum of magnetic fluctuations is present. Remote sensing observations of the corona indicate that heavy ions are hotter than protons and their temperature is anisotropic (T(sub perpindicular / T(sub parallel) >> 1). We study the heating and the acceleration of multi-ion plasma in the solar wind by a turbulent spectrum of Alfvenic fluctuations using a 2-D hybrid numerical model. In the hybrid model the protons and heavy ions are treated kinetically as particles, while the electrons are included as neutralizing background fluid. This is the first two-dimensional hybrid parametric study of the solar wind plasma that includes an input turbulent wave spectrum guided by observation with inhomogeneous background density. We also investigate the effects of He++ ion beams in the inhomogeneous background plasma density on the heating of the solar wind plasma. The 2-D hybrid model treats parallel and oblique waves, together with cross-field inhomogeneity, self-consistently. We investigate the parametric dependence of the perpendicular heating, and the temperature anisotropy in the H+-He++ solar wind plasma. It was found that the scaling of the magnetic fluctuations power spectrum steepens in the higher-density regions, and the heating is channeled to these regions from the surrounding lower-density plasma due to wave refraction. The model parameters are applicable to the expected solar wind conditions at about 10 solar radii.

  5. Fish Immunoglobulins

    OpenAIRE

    Sara Mashoof; Michael F. Criscitiello

    2016-01-01

    The B cell receptor and secreted antibody are at the nexus of humoral adaptive immunity. In this review, we summarize what is known of the immunoglobulin genes of jawed cartilaginous and bony fishes. We focus on what has been learned from genomic or cDNA sequence data, but where appropriate draw upon protein, immunization, affinity and structural studies. Work from major aquatic model organisms and less studied comparative species are both included to define what is the rule for an immunoglob...

  6. Resolving colocalization of bacteria and metal(loid)s on plant root surfaces by combining fluorescence in situ hybridization (FISH) with multiple-energy micro-focused X-ray fluorescence (ME μXRF).

    Science.gov (United States)

    Honeker, Linnea K; Root, Robert A; Chorover, Jon; Maier, Raina M

    2016-12-01

    Metal(loid)-contamination of the environment due to anthropogenic activities is a global problem. Understanding the fate of contaminants requires elucidation of biotic and abiotic factors that influence metal(loid) speciation from molecular to field scales. Improved methods are needed to assess micro-scale processes, such as those occurring at biogeochemical interfaces between plant tissues, microbial cells, and metal(loid)s. Here we present an advanced method that combines fluorescence in situ hybridization (FISH) with synchrotron-based multiple-energy micro-focused X-ray fluorescence microprobe imaging (ME μXRF) to examine colocalization of bacteria and metal(loid)s on root surfaces of plants used to phytostabilize metalliferous mine tailings. Bacteria were visualized on a small root section using SytoBC nucleic acid stain and FISH probes targeting the domain Bacteria and a specific group (Alphaproteobacteria, Gammaproteobacteria, or Actinobacteria). The same root region was then analyzed for elemental distribution and metal(loid) speciation of As and Fe using ME μXRF. The FISH and ME μXRF images were aligned using ImageJ software to correlate microbiological and geochemical results. Results from quantitative analysis of colocalization show a significantly higher fraction of As colocalized with Fe-oxide plaques on the root surfaces (fraction of overlap 0.49±0.19) than to bacteria (0.072±0.052) (proots, metal(loid)s and microbes, information that should lead to improved mechanistic models of metal(loid) speciation and fate. Copyright © 2016 Elsevier B.V. All rights reserved.

  7. Thermal modeling and parametric studies of a greenhouse fish pond in the Central Himalayan Region

    International Nuclear Information System (INIS)

    Sarkar, Bikash; Tiwari, G.N.

    2006-01-01

    This study describes the thermal modeling and its validation of greenhouse fish pond systems. Numerical computations have been performed for a typical day in the month of June, 2005, for the climatic condition of Champawat in the Central Himalayan Region. The energy balance equations have been written considering the effects of conduction, convection, radiation, evaporation and ventilation. The governing equations are numerically solved with Matlab 7.0 software to predict the water temperature. A parametric study has also been performed to find the effects of various parameters, namely the number of air changes per hour, the transmissivity (τ) and the isothermal mass and height of the greenhouse. It is observed that there is no significant effect in the parametric studies on water temperature due to the larger isothermal mass. The model has been validated with experimental data. On an average, the even span passive greenhouse fish pond can increase the inside temperature 4.14 deg. C higher than the temperature of an outdoor pond. Statistical analysis shows that the predicted and experimental values of water temperature exhibited fair agreement with a coefficient of correlation r = 0.90 and root mean square percent deviation e = 1.67%

  8. Turbine related fish mortality

    International Nuclear Information System (INIS)

    Eicher, G.J.

    1993-01-01

    A literature review was conducted to assess the factors affecting turbine-related fish mortality. The mechanics of fish passage through a turbine is outlined, and various turbine related stresses are described, including pressure and shear effects, hydraulic head, turbine efficiency, and tailwater level. The methodologies used in determining the effects of fish passage are evaluated. The necessity of adequate controls in each test is noted. It is concluded that mortality is the result of several factors such as hardiness of study fish, fish size, concentrations of dissolved gases, and amounts of cavitation. Comparisons between Francis and Kaplan turbines indicate little difference in percent mortality. 27 refs., 5 figs

  9. Changes in the dielectric properties of medaka fish embryos during development, studied by electrorotation

    Energy Technology Data Exchange (ETDEWEB)

    Shirakashi, Ryo, E-mail: aa21150@iis.u-tokyo.ac.jp [Institute of Industrial Science, The University of Tokyo, Tokyo 153-8505 (Japan); Mischke, Miriam [Lehrstuhl fuer Biotechnologie und Biophysik, Biozentrum, Universitaet Wuerzburg, Wuerzburg (Germany); Fischer, Peter [Physiologische Chemie, Biozentrum, Universitaet Wuerzburg, Wuerzburg (Germany); Memmel, Simon [Lehrstuhl fuer Biotechnologie und Biophysik, Biozentrum, Universitaet Wuerzburg, Wuerzburg (Germany); Krohne, Georg [Abteilung fuer Elektronenmikroskopie, Biozentrum, Universitaet Wuerzburg, Wuerzburg (Germany); Fuhr, Guenter R. [Lehrstuhl fuer Biotechnologie und Medizintechnik, Universitaet des Saarlandes, Saarbruecken (Germany); Zimmermann, Heiko [Lehrstuhl fuer Molekulare und Zellulaere Biotechnologie, Universitaet des Saarlandes, Saarbruecken (Germany); Sukhorukov, Vladimir L., E-mail: sukhorukov@biozentrum.uni-wuerzburg.de [Lehrstuhl fuer Biotechnologie und Biophysik, Biozentrum, Universitaet Wuerzburg, Wuerzburg (Germany)

    2012-11-09

    Highlights: Black-Right-Pointing-Pointer Electrorotation offers a non-invasive tool for dielectric analysis of fish embryos. Black-Right-Pointing-Pointer The three-shell dielectric model matches the rotation spectra of medaka eggs. Black-Right-Pointing-Pointer The capacitance value suggests a double-membrane structure of yolk envelope. -- Abstract: The Japanese medaka fish, Oryzias latipes, has become a powerful vertebrate model organism in developmental biology and genetics. The present study explores the dielectric properties of medaka embryos during pre-hatching development by means of the electrorotation (ROT) technique. Due to their layered structure, medaka eggs exhibited up to three ROT peaks in the kHz-MHz frequency range. During development from blastula to early somite stage, ROT spectra varied only slightly. But as the embryo progressed to the late-somite stage, the ROT peaks underwent significant changes in frequency and amplitude. Using morphological data obtained by light and electron microscopy, we analyzed the ROT spectra with a three-shell dielectric model that accounted for the major embryonic compartments. The analysis yielded a very high value for the ionic conductivity of the egg shell (chorion), which was confirmed by independent osmotic experiments. A relatively low capacitance of the yolk envelope was consistent with its double-membrane structure revealed by transmission electron microscopy. Yolk-free dead eggs exhibited only one co-field ROT peak, shifted markedly to lower frequencies with respect to the corresponding peak of live embryos. The dielectric data may be useful for monitoring the development and changes in fish embryos' viability/conditions in basic research and industrial aquaculture.

  10. Changes in the dielectric properties of medaka fish embryos during development, studied by electrorotation

    International Nuclear Information System (INIS)

    Shirakashi, Ryo; Mischke, Miriam; Fischer, Peter; Memmel, Simon; Krohne, Georg; Fuhr, Günter R.; Zimmermann, Heiko; Sukhorukov, Vladimir L.

    2012-01-01

    Highlights: ► Electrorotation offers a non-invasive tool for dielectric analysis of fish embryos. ► The three-shell dielectric model matches the rotation spectra of medaka eggs. ► The capacitance value suggests a double-membrane structure of yolk envelope. -- Abstract: The Japanese medaka fish, Oryzias latipes, has become a powerful vertebrate model organism in developmental biology and genetics. The present study explores the dielectric properties of medaka embryos during pre-hatching development by means of the electrorotation (ROT) technique. Due to their layered structure, medaka eggs exhibited up to three ROT peaks in the kHz–MHz frequency range. During development from blastula to early somite stage, ROT spectra varied only slightly. But as the embryo progressed to the late-somite stage, the ROT peaks underwent significant changes in frequency and amplitude. Using morphological data obtained by light and electron microscopy, we analyzed the ROT spectra with a three-shell dielectric model that accounted for the major embryonic compartments. The analysis yielded a very high value for the ionic conductivity of the egg shell (chorion), which was confirmed by independent osmotic experiments. A relatively low capacitance of the yolk envelope was consistent with its double-membrane structure revealed by transmission electron microscopy. Yolk-free dead eggs exhibited only one co-field ROT peak, shifted markedly to lower frequencies with respect to the corresponding peak of live embryos. The dielectric data may be useful for monitoring the development and changes in fish embryos’ viability/conditions in basic research and industrial aquaculture.

  11. Fish intake and ovarian cancer risk: a meta-analysis of 15 case-control and cohort studies.

    Directory of Open Access Journals (Sweden)

    Pei-yue Jiang

    Full Text Available BACKGROUND: Previous epidemiological studies have shown that fish consumption may modify the risk of ovarian cancer. However, these studies yielded controversial results. The present meta-analysis was undertaken to evaluate the relationship between fish intake and ovarian cancer risk. METHODS: A literature search was carried out using Pubmed, Embase, and Cochrane Library Central database for all relevant studies up to August 2013. We pooled the relative risks (RR from individual studies using fixed-effect or random-effect model, and carried out heterogeneity and publication bias analyses. RESULTS: A total of 15 (ten case-control, and five cohort studies were included in the present meta-analysis, representing data for 889,033 female subjects and 6,087 ovarian cancer cases. We found that total fish intake was not significantly associated with the risk of ovarian cancer among cohort studies (RR = 1.04 95% CI [0.89, 1.22] as well as case-control studies (RR = 0.90, 95% CI [0.73,1.12]. There was no evidence of publication bias as suggested by Begg's test (P = 0.55 and Egger's test(P = 0.29. CONCLUSIONS: The present meta-analysis showed that total fish consumption was not significantly associated with the risk of ovarian cancer. Further analysis on different fish species and food preparation methods should be conducted in future studies.

  12. Feasibility study of a hybrid wind turbine system – Integration with compressed air energy storage

    International Nuclear Information System (INIS)

    Sun, Hao; Luo, Xing; Wang, Jihong

    2015-01-01

    Highlights: • A new hybrid wind turbine system is proposed and feasibility study if conducted. • A complete mathematical model is developed and implemented in a software environment. • Multi-mode control strategy is investigated to ensure the system work smoothly and efficiently. • A prototype for implementing the proposed mechanism is built and tested as proof of the concept. • The proposed system is proved to be technically feasible with energy efficiency around 50%. - Abstract: Wind has been recognized as one of major realistic clean energy sources for power generation to meet the continuously increased energy demand and to achieve the carbon emission reduction targets. However, the utilisation of wind energy encounters an inevitable challenge resulting from the nature of wind intermittency. To address this, the paper presents the recent research work at Warwick on the feasibility study of a new hybrid system by integrating a wind turbine with compressed air energy storage. A mechanical transmission mechanism is designed and implemented for power integration within the hybrid system. A scroll expander is adopted to serve as an “air-machinery energy converter”, which can transmit additional driving power generalized from the stored compressed air to the turbine shaft for smoothing the wind power fluctuation. A mathematical model for the complete hybrid process is developed and the control strategy is investigated for corresponding cooperative operations. A prototype test rig for implementing the proposed mechanism is built for proof of the concept. From the simulated and experimental studies, the energy conversion efficiency analysis is conducted while the system experiences different operation conditions and modes. It is proved that the proposed hybrid wind turbine system is feasible technically

  13. Socio-ecological studies on marine fishing villages in the selective south coastal districts of Andhra Pradesh.

    Science.gov (United States)

    Jacob, M Jaya Kumar; Rao, P Brahmaji

    2016-12-01

    Coasts are an amazing gift of nature. Industrialization, infrastructure development, urbanisation, tourism, mechanized fishing, disposal of industrial and urban wastes and effluents, are all ringing the death-knell of the sensitive coastal ecosystems of recently separated State of Andhra Pradesh. These modern interventions have been violent, disregarding both nature's rejuvenating mechanisms, and the symbiotic relationship that exist between the coast and traditional marine fishing communities. Modern fishing tecnologies using mechanized trawlers and small meshed nets lead directly to overexploitation, which is not sustainable. It is evident that fish have to breed successfully and need to have time to grow if the yield has to be used sustainably. Multiple pressures and excessive technological invasion on these marine fishing villages had created an environment in which life has become physically and mentally unhealthy. The focus of this paper is to emphasize that investing in large-scale industrial fishing, building bigger boats, and giving subsidies for pursuing deep sea fishing would be a waste of resources as the fish hauls in these selelctive districts i.e. Krishna, Guntur, Prakasam and Nellore coastal communities have dropped off alarmingly in recent years. It is essential and crucial to focus research and scientific analysis and establish awareness and education to provide a means of distinguishing responses between improvements in quality of ecosystem and those of damages. The study is to elaborate that long-term ecological gains cannot be sacrificed for short-term economic gains that unfortunately lead to environmental damage. Investigating coastal regulations, policies, and their implementation is an urgent social need for the sake of socio-ecological safety and security of coasts and host communities. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. Effects of offshore drilling activities on some selected marine fish species (A case study at the Saltpond Oil Field)

    International Nuclear Information System (INIS)

    Agyiri, A. Y.

    2012-07-01

    The concentration of some heavy metals (As, Cd, Cr, Cu, Hg, Mn, Ni, Pb and Zn) in gills, liver and muscle and the levels of indicator polychlorinated biphenyls (PCBs) in muscles of some selected fish collected from the coast of Saltpond and Jamestown were determined. Quantitative determination of the heavy metals was determined by Flame Atomic Absorption Spectrophotometry (AAS) and Instrumental Neutron Activation Analysis (INAA) The validation of the heavy metal procedure was performed by analysis of standard reference material (DORM-2 Dogfish Muscles) in NAA while that of PCBs compounds were performed by Gas Chromatography-Mass Spectrometry detection (MC-MS). Hg and Pb were under the detection limits for most of the fish tissues with the exception of Sphyraena sphyraena caught from Jamestown, which measured a Pb concentration of 0.56 μg/g in the muscles but was below Turkish guidelines of 1μg/g. Fishes from Saltpond had only As and Mn measured in them with the rest of the metals below detection. A high concentration of arsenic (0.46 to 13.32 μg/g) which was far above the guideline of 1 μg/g (SASO) was measured while concentration of Mn for all fishes measured was below guidelines. However, fishes from Jamestown had most of the heavy metals detected in them but were all below guidelines. The seven indicator PCBs (IUPAC No 18, 28, 52, 101, 138, 153, 180) were determined in the muscles of the fishes. PCBs were found in all samples from Saltpond while Jamestown had PCB 18 not detected in any of the fishes. Total PCBs in fishes from Saltpond and Jamestown were 82.81 ng/g and 35.06 ng/g respectively. None of the fish recorded a total PCB above 200ng/g which is the permissible level (EC, 2001). From the risk assessment, consumers of all ages are likely to contract arsenic-related diseases through the consumption of fish from Saltpond since the arsenic concentration in all fishes examined were very high making the PHQs (1.738 to 58.178) values greater than 1. The

  15. Technological Capability Upgrading and Entrepreneurship: Case Study of Selected Indonesian Fish Processing Companies

    Directory of Open Access Journals (Sweden)

    Erman Aminullah

    2016-07-01

    Full Text Available This study analyzes the technological capability upgrading and entrepreneurship in the Indonesian fish processing industry. The analysis viewed from the Sectoral Innovation System (SIS focuses on two aspects: the enabling factors for innovation, and the role of entrepreneur in technological capability upgrading. The study finds that Indonesian fish processing companies: (i are less interactive with local universities or other STI (science, technology and innovation centers, and innovation was mostly done through learning by DUI (doing, using and interacting; (ii are characterized as low-tech industries with a high standard for food safety and product differentiation; (iii apply adaptive innovation, modified from existing technology or knowledge, except for the leading companies who apply innovation for new products in the market; (iv actors, technology, market trends, and networks are the main enabling factors for innovation; and (v the role of entrepreneurs – especially in building entrepreneurial networks – were dominant in the leading companies. The entrepreneurial networks exist and work in global distribution chains that are widely adopted by companies to export their products through buyer–producer relationships. The pathways toward export markets are: global born directly, fastly learned global, and delay learned global companies. These categories have enriched the Mets category (2012. The policy implications of the findings for government should: (i facilitate companies’ interaction with local universities or other STI centers; and (ii encourage domestic companies to improve their competitiveness by shifting to higher added value products through various innovations and trading policy schemes.

  16. Studying the effects of nucleating agents on texture modification of puffed corn-fish snack.

    Science.gov (United States)

    Shahmohammadi, Hamid Reza; Bakar, Jamilah; Rahman, Russly Abdul; Adzhan, Noranizan Mohd

    2014-02-01

    To improve textural attributes of puffed corn-fish snack, the effects of 1%, 1.5%, and 2% of calcium carbonate, magnesium silicate (talc), sodium bicarbonate as well as 5% and 10% of wheat bran (as the nucleating materials) on textural attributes were studied. Sensory evaluation, bulk density, expansion ratio, maximum force, and count peaks were measured using the Kramer test. The results showed that all of the additives except bran significantly enhanced the texture. Among them, talc at 0.5% was the best to enhance the density and expansion ratio. Effects of using 0.5% talc on puffed corn-fish snack microstructure were studied using scanning electron microscopy. The average cell diameter of 109 ± 48 μm and cell numbers per square centimeter of 67.4 for talc-treated products were obtained, while for nontalc-treated extrudates, average cell diameter of 798 ± 361 μm and cell numbers per square centimeter of 13.9 were found. Incorporation of 0.5% w/w of magnesium silicate reduced (7-fold) the average cell diameter while increased (4-fold) the cell number. © 2014 Institute of Food Technologists®

  17. The study of biological value of peptone derived from secondary raw fish

    Directory of Open Access Journals (Sweden)

    Kuranova L. K.

    2016-09-01

    Full Text Available The possibility of using secondary fish raw materials in particular musculoskeletal waste from filleting the cod species of fish as raw material base for production of food peptones has been studied. The content of water, fat, protein substances, chloride sodium in the raw material and the product have been determined by standard methods. Amino-acid composition has been determined by high effective liquid chromatography. The biological value of peptone and the balance of essential amino acids have been calculated. It has been established that waste from the cod filleting (the humerus with excess flesh contains 18.95 % protein and a slight (0.15 % amount of fat. The models of peptone – fermentative fish hydrolyzate obtained from cod withdrawals – have been researched. Proteolytic activity used in the hydrolysis of enzyme (protosubtilin G3X has been defined as 560.77 mmol TYR/g. Peptone is an amorphous, fine powder of a light beige color. The product is hygroscopic, readily soluble in water. The chemical and biochemical quality characteristics of enzymatic peptone have been defined. Mass fraction of protein in the derived product is 92.27 %, mass fraction of water – 4.7 %, sodium chloride and 2.6 %, fat – 0.3 %. The total number of amino acids in the product is 94.7 %. Peptone in protein contains all the essential amino acids, the total content of which is 40.8 %. The biological value of the product has been estimated by calculation methods. It has been established that tryptophan is the only limiting amino acid in the protein of peptone, amino-acid score is 66.8 %, the rationality coefficient of the product is 0.42, which characterizes it as a fairly balanced protein product. Peptone obtained from secondary fish raw materials by protein content and its properties corresponds to the category of protein isolates and can be recommended for use in food as complete protein food additives and as protein content in sports nutrition products.

  18. An experimental study on energy generation with a photovoltaic (PV)-solar thermal hybrid system

    International Nuclear Information System (INIS)

    Erdil, Erzat; Ilkan, Mustafa; Egelioglu, Fuat

    2008-01-01

    A hybrid system, composed of a photovoltaic (PV) module and a solar thermal collector is constructed and tested for energy collection at a geographic location of Cyprus. Normally, it is required to install a PV system occupying an area of about 10 m 2 in order to produce electrical energy; 7 kWh/day, required by a typical household. In this experimental study, we used only two PV modules of area approximately 0.6 m 2 (i.e., 1.3x0.47 m 2 ) each. PV modules absorb a considerable amount of solar radiation that generate undesirable heat. This thermal energy, however, may be utilized in water pre-heating applications. The proposed hybrid system produces about 2.8 kWh thermal energy daily. Various attachments that are placed over the hybrid modules lead to a total of 11.5% loss in electrical energy generation. This loss, however, represents only 1% of the 7 kWh energy that is consumed by a typical household in northern Cyprus. The pay-back period for the modification is less than 2 years. The low investment cost and the relatively short pay-back period make this hybrid system economically attractive

  19. Evaluation of Surface Characteristics of Denture Base Using Organic-Inorganic Hybrid Coating: An SEM Study.

    Science.gov (United States)

    Aa, Jafari; Mh, Lotfi-Kamran; M, Ghafoorzadeh; Sm, Shaddel

    2017-06-01

    Despite the numerous positive features of acrylic denture base, there are a number of undeniable associated disadvantages. The properties of denture base have been improved through various interventions including application of different types of filler and coatings. This study aimed to evaluate the surface roughness, thickness and coating quality of organic-inorganic coating on the denture base through scanning electron microscopy. Moreover, the colour change was evaluated visually. The organic-inorganic hybrid coatings were prepared. Acrylic discs of 10×10 mm were fabricated. The test discs were dipped in the hybrid coating and cured. In order to evaluate the surface roughness and coating thickness, the surface and cross-section of the samples in both coated and control groups were subjected to scanning electron microscopy. The colour change and transparency were visually evaluated with naked eyes. The data were statistically analyzed by student's t test. The hybrid materials perfectly covered all the surfaces of acrylic resin and established proper thickness. The coated group seemed smoother and flatter than the control group; however, the difference was not statistically significant ( for all parameters p > 0.05). It was quite a thin coating and no perceptible colour change was observed. The hybrid coating maintained good binding, caused no noticeable discoloration, and thoroughly covered the acrylic resin surface with uniform delicate thickness. It also slightly improved the acrylic resin surface roughness.

  20. Experimental study into a hybrid PCCI/CI concept for next-generation heavy-duty diesel engines

    NARCIS (Netherlands)

    Doosje, E.; Willems, F.P.T.; Baert, R.S.G.; Dijk, M.D. van

    2012-01-01

    This paper presents the first results of an experimental study into a hybrid combustion concept for next-generation heavy-duty diesel engines. In this hybrid concept, at low load operating conditions, the engine is run in Pre-mixed Charge Compression Ignition (PCCI) mode, whereas at high load

  1. Fish Allergy

    Science.gov (United States)

    ... Safe Videos for Educators Search English Español Fish Allergy KidsHealth / For Parents / Fish Allergy What's in this ... Print en español Alergia al pescado About Fish Allergy A fish allergy is not exactly the same ...

  2. Assessing relationships between chemical exposure, parasite infection, fish health, and fish ecological status: a case study using chub (Leuciscus cephalus) in the Bílina River, Czech Republic.

    Science.gov (United States)

    Wenger, Michael; Ondracková, Markéta; Machala, Miroslav; Neca, Jirí; Hyrsl, Pavel; Simková, Andrea; Jurajda, Pavel; von der Ohe, Peter; Segner, Helmut

    2010-02-01

    Multiple stressor scenarios, as they are relevant in many watersheds, call for approaches extending beyond conventional chemical-focused approaches. The present study, investigated the fish population, represented by chub (Leuciscus cephalus), in the Bílina River (Czech Republic), which is impacted by various pollution sources and might pose a risk on the fish population. To confirm or reject this hypothesis it was examined whether there exists an association between abundance of chub and exposure to toxic chemicals as well as natural stressors, represented by parasites, and whether health-related suborganismal traits, namely, organ indices, tissue histopathology, and immune parameters, would help in revealing relationships between stressor impact and population status. Toxic pressure was assessed by the toxic unit approach, which gives an integrative estimate of toxic effect concentrations and by measuring the biomarkers cytochrome P4501A and vitellogenin, which indicate exposure to bioavailable arylhydrocarbon- or estrogen receptor ligands. Parasite pressure was estimated by determining abundance and species composition of ecto- and endoparasites of chub. Chub abundance was high upstream in the Bílina, low to zero in the middle stretches, and increased again downstream. Toxic pressure increased in the downstream direction, while parasite intensity decreased in this direction. Health status of chub did not differ clearly between up-, middle-, and downstream sites. Thus, it appears that neither toxic pressure nor parasite pressure nor their combination translates into a change of chub health status. By using varied assessment tools, this study provides evidence against a presumed causative role of toxicants impairing the fish ecological status of the Bílina River. Copyright 2009 SETAC.

  3. Tissue engineering of fish skin: behavior of fish cells on poly(ethylene glycol terephthalate)/poly(butylene terephthalate) copolymers in relation to the composition of the polymer substrate as an initial step in constructing a robotic/living tissue hybrid.

    Science.gov (United States)

    Pouliot, Roxane; Azhari, Rosa; Qanadilo, Hala F; Mahmood, Tahir A; Triantafyllou, Michael S; Langer, Robert

    2004-01-01

    This study presents the development of a biosynthetic fish skin to be used on aquatic robots that can emulate fish. Smoothness of the external surface is desired in improving high propulsive efficiency and maneuvering agility of autonomous underwater vehicles such as the RoboTuna (Triantafyllou, M., and Triantafyllou, G. Sci. Am. 272, 64, 1995). An initial step was to determine the seeding density and select a polymer for the scaffolds. The attachment and proliferation of chinook salmon embryo (CHSE-214) and brown bullhead (BB) cells were studied on different compositions of a poly(ethylene glycol terephthalate) (PEGT) and poly(butylene terephthalate) (PBT) copolymer (Polyactive). Polymer films were used, cast of three different compositions of PEGT/PBT (weight ratios of 55/45, 60/40, and 70/30) and two different molecular masses of PEGT (300 and 1000 Da). When a 55 wt% and a 300-Da molecular mass form of PEGT was used, maximum attachment and proliferation of CHSE-214 and BB cells were achieved. Histological studies and immunostaining indicate the presence of collagen and cytokeratins in the extracellular matrix formed after 14 days of culture. Porous scaffolds of PEGT/PBT copolymers were also used for three-dimensional tissue engineering of fish skin, using BB cells. Overall, our results indicate that fish cells can attach, proliferate, and express fish skin components on dense and porous Polyactive scaffolds.

  4. Stuttering Intervention in Three Service Delivery Models (Direct, Hybrid, and Telepractice): Two Case Studies

    OpenAIRE

    VALENTINE, DANIEL T.

    2015-01-01

    This study assessed outcomes in stuttering intervention across three service delivery models: direct, hybrid, and telepractice for two 11-year old children who stutter. The goal of the study was to investigate whether short-term goals were maintained through the telepractice sessions. The Stuttering Severity Instrument, Fourth Edition (SSI-4) was administered to each child before and after each intervention period and weekly fluency samples (percentage of stuttered syllables in a monologue) w...

  5. Fish cognition

    OpenAIRE

    Bshary, Redouan; Brown, Culum

    2017-01-01

    The central nervous system, and the brain in particular, is one of the most remarkable products of evolution. This system allows an individual to acquire, process, store and act on information gathered from the environment. The resulting flexibility in behavior beyond genetically coded strategies is a prime adaptation in animals. The field of animal cognition examines the underlying processes and mechanisms. Fishes are a particularly interesting group of vertebrates to study cognition for two...

  6. #JeSuisCharlie: Towards a Multi-Method Study of Hybrid Media Events

    Directory of Open Access Journals (Sweden)

    Johanna Sumiala

    2016-10-01

    Full Text Available This article suggests a new methodological model for the study of hybrid media events with global appeal. This model, developed in the project on the 2015 Charlie Hebdo attacks in Paris, was created specifically for researching digital media—and in particular, Twitter. The article is structured as follows. Firstly, the methodological scope is discussed against the theoretical context, e.g. the theory of media events. In the theoretical discussion, special emphasis is given to i disruptive, upsetting, or disintegrative media events and hybrid media events and ii the conditions of today’s heterogeneous and globalised media communication landscape. Secondly, the article introduces a multi-method approach developed for the analysis of hybrid media events. In this model, computational social science—namely, automated content analysis (ACA and social network analytics (SNA—are combined with a qualitative approach—specifically, digital ethnography. The article outlines three key phases for research in which the interplay between quantitative and qualitative approaches is played out. In the first phase, preliminary digital ethnography is applied to provide the outline of the event. In the second phase, quantitative social network analytics are applied to construct the digital field for research. In this phase, it is necessary to map a what is circulating on the websites and b where this circulation takes place. The third and final phase applies a qualitative approach and digital ethnography to provide a more nuanced, in-depth interpretation of what (substance/content is circulating and how this material connects with the ‘where’ in the digital landscape, hence constituting links and connections in the hybrid media landscape. In conclusion, the article reflects on how this multi-method approach contributes to understanding the workings of today’s hybrid media events: how they create and maintain symbolic battles over certain imagined

  7. Feasibility study of hybrid retrofits to an isolated off-grid diesel power plant

    International Nuclear Information System (INIS)

    Rehman, S.; Ahmad, F.; Shaahid, S.M.; Shash, A.; El-Amin, I.M.; Al-Shehri, A.M.; Bakhashwain, J.M.

    2007-01-01

    The green sources of energy are being encouraged to reduce the environmental pollution and combat the global warming of the planet. A target of 12% usage of wind energy only has been agreed by the UNO country members to achieve by 2020. So, the power of the wind is being used to generate electricity both as grid connected and isolated wind-diesel hybrid power plants. This paper performed a pre-feasibility of wind penetration into an existing diesel plant of a village in north eastern part of Saudi Arabia. For simulation purpose, wind speed data from a near by airport and the load data from the village have been used. The hybrid system design tool HOMER has been used to perform the feasibility study. In the present scenario, for wind speed less than 6.0m/s the, the existing diesel power plant is the only feasible solution over the range of fuel prices used in the simulation. The wind diesel hybrid system becomes feasible at a wind speed of 6.0m/s or more and a fuel price of 0.1$/L or more. If the carbon tax is taken into consideration and subsidy is abolished then it is expected that the hybrid system become feasible. The maximum annual capacity shortage did not have any effect on the cost of energy which may be accounted for larger sizes of wind machines and diesel generators. It is recommended that the wind data must be collected at the village at three different heights using a wind mast of 40m for a minimum of one complete year and then the hybrid system must be re-designed. (author)

  8. STUDY ON THE BEHAVIOUR OF THE DIFFERENT ORIGIN SILKWORM HYBRIDS UNDER THE CLIMATIC CONDITIONS OF BULGARIA

    Directory of Open Access Journals (Sweden)

    ALEXANDRA MATEI

    2007-10-01

    Full Text Available Romania, Ukraine, Turkey and Uzbekistan as countries placed in the Black, Caspian Seasand Central Asia (BACSA region, in comparison with hybrids from China, Japan, Italy andKorea has been carried out in Sericulture Station Vratza – Bulgaria.The study pointed out the superiority of the Japanese hybrid Shunrei + Shogetsu which hadthe highest cocoon yield by one box of eggs (41,10 kg and the highest raw silk productivity(7,05 kg/box of eggs.The silkworm hybrids produced in BACSA members countries had ahatching percentage ranged from 77,50% to 98,50%, a high pupation percentage (72,86 –96,91%, cocoon weight (1,892 – 2,319 g and fresh cocoon yield by one box of silkwormvaried from 29,894 kg to 40,982 kg.The Romanian hybrids had high values of the rawcocoon weight (2,307 g Record and 2,194 g Baneasa Super, the appreciable values of thecocoon yield/box of eggs (36,135 kg Record and 39,168 kg Baneasa Super, but low valuesof the silk content (20,38% Record and 20,51% Baneasa Super and of the raw silkproductivity/box of eggs (4,33 kg Record and 4,80 kg Baneasa Super.The breeding works inthe BACSA member countri