Sample records for greater himalayan sequence

  1. Tectonic and metamorphic discontinuities in the Greater Himalayan Sequence in Central Himalaya: in-sequence shearing by accretion from the Indian plate (United States)

    Carosi, Rodolfo


    The Greater Himalayan Sequence (GHS) is the main metamorphic unit of the Himalayas, stretching for over 2400 km, bounded to the South by the Main Central Thrust (MCT) and to the North by the South Tibetan Detachment (STD) whose contemporanous activity controlled its exhumation between 23 and 17 Ma (Godin et al., 2006). Several shear zones and/or faults have been recognized within the GHS, usually regarded as out of sequence thrusts. Recent investigations, using a multitechnique approach, allowed to recognize a tectonic and metamorphic discontinuity, localized in the mid GHS, with a top-to-the SW sense of shear (Higher Himalayan Discontinuity: HHD) (Carosi et al., 2010; Montomoli et al., 2013). U-(Th)-Pb in situ monazite ages provide temporal constraint of the acitivity of the HHD from ~ 27-25 Ma to 18-17 Ma. Data on the P and T evolution testify that this shear zone affected the tectono-metamorphic evolution of the belt and different P and T conditions have been recorded in the hanging-wall and footwall of the HHD. The HHD is a regional tectonic feature running for more than 700 km, dividing the GHS in two different portions (Iaccarino et al., 2015; Montomoli et al., 2015). The occurrence of even more structurally higher contractional shear zone in the GHS (above the HHD): the Kalopani shear zone (Kali Gandaki valley, Central Nepal), active from ~ 41 to 30 Ma (U-Th-Pb on monazite) points out to a more complex deformation pattern in the GHS characterized by in sequence shearing. The actual proposed models of exhumation of the GHS, based exclusively on the MCT and STD activities, are not able to explain the occurrence of the HHD and other in-sequence shear zones. Any model of the tectonic and metamorphic evolution of the GHS should account for the occurrence of the tectonic and metamorphic discontinuities within the GHS and its consequences on the metamorphic paths and on the assembly of Himalayan belt. References Godin L., Grujic D., Law, R. D. & Searle, M. P. 2006

  2. Metamorphic and tectonic evolution of the Greater Himalayan Crystalline Complex in Nyalam region, south Tibet (United States)

    Wang, Jia-Min; Zhang, Jin-Jiang; Rubatto, Daniela


    timing along the South Tibetan detachment (27-16 Ma) but precedes that along the MCT (16-10 Ma). Comparison between the obtained P-T-t data and model predictions implies that a lateral crustal flow process dominated the exhumation of the high-grade upper GHC migmitites during 25-16 Ma, whereas a critical taper thrusting process dominated the exhumation of the MCT zone nonmigmatites and cooled migmatites in the lower GHC at 16-10 Ma. In other words, at different temporal and spatial scale, both propagating thrusting along large tectonic boundaries and a low-viscosity melting crust could contribute to the exhumation of high-grade metamorphic rocks in Himalaya-like large hot collisional orogens. KEY WORDS: Greater Himalayan Crystalline Complex; P-T path; U-Pb geochronology; channel flow; tectonic discontinuity References: Wang, J.M., Rubatto, D., Zhang, J.J., 2015a. Timing of partial melting and cooling across the Greater Himalayan Crystalline Complex (Nyalam, central Himalaya): in-sequence thrusting and its implications. Journal of Petrology, 56, 1677-1702. Wang, J.M., Zhang, J.J., Wei, C.J., Rai, S.M., Wang, M., Qian, J.H., 2015b. Characterizing the metamorphic discontinuity across the Main Central Thrust Zone of eastern-central Nepal. Journal of Asian Earth Sciences 101, 83-100. Wang, J.M., Zhang, J.J., Wang, X.X., 2013. Structural kinematics, metamorphic P-T profiles and zircon geochronology across the Greater Himalayan Crystalline Complex in south-central Tibet: implication for a revised channel flow. Journal of Metamorphic Geology 31, 607-628.

  3. Lesser Himalayan sequences in Eastern Himalaya and their deformation: Implications for Paleoproterozoic tectonic activity along the northern margin of India

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    Dilip Saha


    Full Text Available Substantial part of the northern margin of Indian plate is subducted beneath the Eurasian plate during the Caenozoic Himalayan orogeny, obscuring older tectonic events in the Lesser Himalaya known to host Proterozoic sedimentary successions and granitic bodies. Tectonostratigraphic units of the Proterozoic Lesser Himalayan sequence (LHS of Eastern Himalaya, namely the Daling Group in Sikkim and the Bomdila Group in Arunachal Pradesh, provide clues to the nature and extent of Proterozoic passive margin sedimentation, their involvement in pre-Himalayan orogeny and implications for supercontinent reconstruction. The Daling Group, consisting of flaggy quartzite, meta-greywacke and metapelite with minor mafic dyke and sill, and the overlying Buxa Formation with stromatolitic carbonate-quartzite-slate, represent shallow marine, passive margin platformal association. Similar lithostratigraphy and broad depositional framework, and available geochronological data from intrusive granites in Eastern Himalaya indicate strikewise continuity of a shallow marine Paleoproterozoic platformal sequence up to Arunachal Pradesh through Bhutan. Multiple fold sets and tectonic foliations in LHS formed during partial or complete closure of the sea/ocean along the northern margin of Paleoproterozoic India. Such deformation fabrics are absent in the upper Palaeozoic–Mesozoic Gondwana formations in the Lesser Himalaya of Darjeeling-Sikkim indicating influence of older orogeny. Kinematic analysis based on microstructure, and garnet composition suggest Paleoproterozoic deformation and metamorphism of LHS to be distinct from those associated with the foreland propagating thrust systems of the Caenozoic Himalayan collisional belt. Two possibilities are argued here: (1 the low greenschist facies domain in the LHS enveloped the amphibolite to granulite facies domains, which were later tectonically severed; (2 the older deformation and metamorphism relate to a Pacific type

  4. Genetic relatedness among indigenous rice varieties in the Eastern Himalayan region based on nucleotide sequences of the Waxy gene. (United States)

    Choudhury, Baharul I; Khan, Mohammed L; Dayanandan, Selvadurai


    Indigenous rice varieties in the Eastern Himalayan region of Northeast India are traditionally classified into sali, boro and jum ecotypes based on geographical locality and the season of cultivation. In this study, we used DNA sequence data from the Waxy (Wx) gene to infer the genetic relatedness among indigenous rice varieties in Northeast India and to assess the genetic distinctiveness of ecotypes. The results of all three analyses (Bayesian, Maximum Parsimony and Neighbor Joining) were congruent and revealed two genetically distinct clusters of rice varieties in the region. The large group comprised several varieties of sali and boro ecotypes, and all agronomically improved varieties. The small group consisted of only traditionally cultivated indigenous rice varieties, which included one boro, few sali and all jum varieties. The fixation index analysis revealed a very low level of differentiation between sali and boro (F(ST) = 0.005), moderate differentiation between sali and jum (F(ST) = 0.108) and high differentiation between jum and boro (F(ST) = 0.230) ecotypes. The genetic relatedness analyses revealed that sali, boro and jum ecotypes are genetically heterogeneous, and the current classification based on cultivation type is not congruent with the genetic background of rice varieties. Indigenous rice varieties chosen from genetically distinct clusters could be used in breeding programs to improve genetic gain through heterosis, while maintaining high genetic diversity.

  5. Probabilistic Motor Sequence Yields Greater Offline and Less Online Learning than Fixed Sequence. (United States)

    Du, Yue; Prashad, Shikha; Schoenbrun, Ilana; Clark, Jane E


    It is well acknowledged that motor sequences can be learned quickly through online learning. Subsequently, the initial acquisition of a motor sequence is boosted or consolidated by offline learning. However, little is known whether offline learning can drive the fast learning of motor sequences (i.e., initial sequence learning in the first training session). To examine offline learning in the fast learning stage, we asked four groups of young adults to perform the serial reaction time (SRT) task with either a fixed or probabilistic sequence and with or without preliminary knowledge (PK) of the presence of a sequence. The sequence and PK were manipulated to emphasize either procedural (probabilistic sequence; no preliminary knowledge (NPK)) or declarative (fixed sequence; with PK) memory that were found to either facilitate or inhibit offline learning. In the SRT task, there were six learning blocks with a 2 min break between each consecutive block. Throughout the session, stimuli followed the same fixed or probabilistic pattern except in Block 5, in which stimuli appeared in a random order. We found that PK facilitated the learning of a fixed sequence, but not a probabilistic sequence. In addition to overall learning measured by the mean reaction time (RT), we examined the progressive changes in RT within and between blocks (i.e., online and offline learning, respectively). It was found that the two groups who performed the fixed sequence, regardless of PK, showed greater online learning than the other two groups who performed the probabilistic sequence. The groups who performed the probabilistic sequence, regardless of PK, did not display online learning, as indicated by a decline in performance within the learning blocks. However, they did demonstrate remarkably greater offline improvement in RT, which suggests that they are learning the probabilistic sequence offline. These results suggest that in the SRT task, the fast acquisition of a motor sequence is driven

  6. MEDEX2015: Greater Sea-Level Fitness Is Associated with Lower Sense of Effort During Himalayan Trekking Without Worse Acute Mountain Sickness. (United States)

    Rossetti, Gabriella M K; Macdonald, Jamie H; Smith, Matthew; Jackson, Anna R; Callender, Nigel; Newcombe, Hannah K; Storey, Heather M; Willis, Sebastian; van den Beukel, Jojanneke; Woodward, Jonathan; Pollard, James; Wood, Benjamin; Newton, Victoria; Virian, Jana; Haswell, Owen; Oliver, Samuel J


    Rossetti, Gabriella M.K., Jamie H. Macdonald, Matthew Smith, Anna R. Jackson, Nigel Callender, Hannah K. Newcombe, Heather M. Storey, Sebastian Willis, Jojanneke van den Beukel, Jonathan Woodward, James Pollard, Benjamin Wood, Victoria Newton, Jana Virian, Owen Haswell, and Samuel J. Oliver. MEDEX2015: Greater sea-level fitness is associated with lower sense of effort during Himalayan trekking without worse acute mountain sickness. High Alt Med Biol. 18:152-162, 2017.-This study examined the complex relationships of fitness and hypoxic sensitivity with submaximal exercise responses and acute mountain sickness (AMS) at altitude. Determining these relationships is necessary before fitness or hypoxic sensitivity tests can be recommended to appraise individuals' readiness for altitude. Forty-four trekkers (26 men; 18 women; 20-67 years) completed a loaded walking test and a fitness questionnaire in normoxia to measure and estimate sea-level maximal aerobic capacity (maximum oxygen consumption [[Formula: see text]O 2max ]), respectively. Participants also completed a hypoxic exercise test to determine hypoxic sensitivity (cardiac, ventilatory, and arterial oxygen saturation responses to acute hypoxia, fraction of inspired oxygen [Fio 2 ] = 0.112). One month later, all participants completed a 3-week trek to 5085 m with the same ascent profile. On ascent to 5085 m, ratings of perceived exertion (RPE ascent ), fatigue by Brunel Mood Scale, and AMS were recorded daily. At 5085 m, RPE during a fixed workload step test (RPE fixed ) and step rate during perceptually regulated exercise (STEP RPE35 ) were recorded. Greater sea-level [Formula: see text]O 2max was associated with, and predicted, lower sense of effort (RPE ascent ; r = -0.43; p sea-level fitness reported less effort during simulated and actual trekking activities, had better mood (less fatigue), and chose a higher step rate during perceptually regulated exercise, but did not suffer from worse AMS

  7. Draft genome sequence of Lampropedia cohaerens strain CT6(T) isolated from arsenic rich microbial mats of a Himalayan hot water spring. (United States)

    Tripathi, Charu; Mahato, Nitish K; Rani, Pooja; Singh, Yogendra; Kamra, Komal; Lal, Rup


    Lampropedia cohaerens strain CT6(T), a non-motile, aerobic and coccoid strain was isolated from arsenic rich microbial mats (temperature ~45 °C) of a hot water spring located atop the Himalayan ranges at Manikaran, India. The present study reports the first genome sequence of type strain CT6(T) of genus Lampropedia cohaerens. Sequencing data was generated using the Illumina HiSeq 2000 platform and assembled with ABySS v 1.3.5. The 3,158,922 bp genome was assembled into 41 contigs with a mean GC content of 63.5 % and 2823 coding sequences. Strain CT6(T) was found to harbour genes involved in both the Entner-Duodoroff pathway and non-phosphorylated ED pathway. Strain CT6(T) also contained genes responsible for imparting resistance to arsenic, copper, cobalt, zinc, cadmium and magnesium, providing survival advantages at a thermal location. Additionally, the presence of genes associated with biofilm formation, pyrroloquinoline-quinone production, isoquinoline degradation and mineral phosphate solubilisation in the genome demonstrate the diverse genetic potential for survival at stressed niches.

  8. Earthquake activity along the Himalayan orogenic belt (United States)

    Bai, L.; Mori, J. J.


    The collision between the Indian and Eurasian plates formed the Himalayas, the largest orogenic belt on the Earth. The entire region accommodates shallow earthquakes, while intermediate-depth earthquakes are concentrated at the eastern and western Himalayan syntaxis. Here we investigate the focal depths, fault plane solutions, and source rupture process for three earthquake sequences, which are located at the western, central and eastern regions of the Himalayan orogenic belt. The Pamir-Hindu Kush region is located at the western Himalayan syntaxis and is characterized by extreme shortening of the upper crust and strong interaction of various layers of the lithosphere. Many shallow earthquakes occur on the Main Pamir Thrust at focal depths shallower than 20 km, while intermediate-deep earthquakes are mostly located below 75 km. Large intermediate-depth earthquakes occur frequently at the western Himalayan syntaxis about every 10 years on average. The 2015 Nepal earthquake is located in the central Himalayas. It is a typical megathrust earthquake that occurred on the shallow portion of the Main Himalayan Thrust (MHT). Many of the aftershocks are located above the MHT and illuminate faulting structures in the hanging wall with dip angles that are steeper than the MHT. These observations provide new constraints on the collision and uplift processes for the Himalaya orogenic belt. The Indo-Burma region is located south of the eastern Himalayan syntaxis, where the strike of the plate boundary suddenly changes from nearly east-west at the Himalayas to nearly north-south at the Burma Arc. The Burma arc subduction zone is a typical oblique plate convergence zone. The eastern boundary is the north-south striking dextral Sagaing fault, which hosts many shallow earthquakes with focal depth less than 25 km. In contrast, intermediate-depth earthquakes along the subduction zone reflect east-west trending reverse faulting.

  9. Segmentation and rejuvenation of the Greater Himalayan sequence in western Nepal revealed by in situ U-Th/Pb monazite petrochronology (United States)

    Braden, Zoe; Godin, Laurent; Cottle, John M.


    In the western Nepal Himalaya, a major mountain building shear zone, the Main Central thrust, is exposed in multiple locations along its southward transport direction. The hanging wall of the Main Central thrust was sampled in both hinterland and foreland exposures, in the upper Karnali valley and around Jumla, respectively. In situ U-Th/Pb monazite petrochronology coupled with microstructural and petrographic observations reveals distinctly different timing of deformation, despite the geographic proximity and apparent structural continuity between the two regions. The Y content, the Gd to Yb ratio and the Eu anomaly in monazite constrain the timing of metamorphic reactions. Rocks in the upper Karnali valley record deformation associated with metamorphism at 18 Ma, melt crystallization starting at ca. 14 Ma and lasting until at least 11-10 Ma. In contrast, the Jumla region records a more protracted series of events with metamorphism initiating as early as 47 Ma and lasting until 18 Ma, punctuated by at least two periods of melt crystallization. In both areas, the age of melt crystallization decreases down section through the hanging wall towards the Main Central thrust. Ductile deformation in the Jumla region ceased around ca. 18 Ma, while rocks at similar structural positions in the hinterland in upper Karnali valley were still being actively deformed and melting at ca. 11 Ma. The southern, foreland-most, hanging-wall rocks (Jumla region) were consequently exhumed above the ductile-brittle transition while the northern hinterland-most hanging-wall rocks (upper Karnali valley) were still undergoing ductile deformation and partial melting.

  10. Chemical evolution of Himalayan leucogranites based on an O, U-Pb and Hf study of zircon (United States)

    Hopkinson, Thomas N.; Warren, Clare J.; Harris, Nigel B. W.; Hammond, Samantha J.; Parrish, Randall R.


    Crustal melting is a characteristic process at convergent plate margins, where crustal rocks are heated and deformed. Miocene leucogranite sheets and plutons are found intruded into the high-grade metasedimentary core (the Greater Himalayan Sequence, GHS) across the Himalayan orogen. Previously-published Himalayan whole-rock data suggest that these leucogranites formed from a purely meta-sedimentary source, isotopically similar to those into which they now intrude. Bulk rock analyses carry inherent uncertainties, however: they may hide contributions from different contributing sources, and post-crystallization processes such as fluid interaction may significantly alter the original chemistry. In contrast, zircon is more able to retain precise information of the contributing sources of the melt from which it crystallises whilst its resistant nature is impervious to post-magmatic processes. This multi-isotope study of Oligocene-Miocene leucogranite zircons from the Bhutan Himalaya, seeks to differentiate between various geochemical processes that contribute to granite formation. Hf and O isotopes are used to detect discrete changes in melt source while U-Pb isotopes provide the timing of zircon crystallisation. Our data show that zircon rims of Himalayan age yield Hf-O signatures that lie within the previously reported whole-rock GHS field, confirming the absence of a discernible mantle contribution to the leucogranite source. Importantly, we document a decrease in the minimum ɛHf values during Himalayan orogenesis through time, correlating to a change in Hf model age from 1.4 Ga to 2.4 Ga. Nd model ages for the older Lesser Himalayan metasediments (LHS) that underthrust the GHS are significantly older than those for the GHS (2.4-2.9 Ga compared with 1.4-2.2 Ga), and as such even minor contributions of LHS material incorporated into a melt would significantly increase the resulting Hf model age. Hence our leucogranite data suggest either a change of source within

  11. Himalayan Adaptation, Water, and Resilience | IDRC - International ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Himalayan Adaptation, Water, and Resilience. This research project will serve to help poor and vulnerable women, men, and children learn to adapt to and manage climate change in Asia's Hindu Kush Himalayan region. Why the Himalayan region is important. The region, stretching from central Afghanistan to northern ...

  12. Himalayan hydro on the horizon

    International Nuclear Information System (INIS)

    Sharp, Timothy


    The prospects for development of hydro in the Himalayas has been enhanced by privatisation and the urgent need for clean electricity in the north of India. There are various hurdles to be overcome before the projects are likely to move forward in earnest before 2005, and these are mentioned. The demand for electricity in India is said to be enormous. At present, there is much polluting industry along the Himalayas. As throughout the Indian privatisation dilemma, the critical issues for development of Himalayan hydro come down to credible commercial power markets and finance. With regard to finance and administrative changes, the Indian government is carrying out a number of actions and these are itemised. The US is vigorously promoting the development of Himalayan hydro as a key to much needed regional co-operation and the World Bank is supportive

  13. Sporotrichosis in sub-himalayan India. (United States)

    Verma, Santwana; Verma, Ghanshyam K; Singh, Gagandeep; Kanga, Anil; Shanker, Vinay; Singh, Digvijay; Gupta, Poonam; Mokta, Kiran; Sharma, Vinita


    Sporotrichosis is endemic in the Sub-Himalayan belt, which ranges from the northern to the north-eastern Indian subcontinent. Similar to many parts of the developing world, sporotrichosis is commonly recognized clinically in this region however consolidated epidemiological data is lacking. We report epidemiological, clinical and microbiological data from a hundred culture positive cases of sporotrichosis. Out of 305 clinically suspicious cases of sporotrichosis, a total of 100 isolates were identified as Sporothrix schenckii species complex (S. schenckii) on culture. Out of the culture proven cases 71% of the cases presented with lymphocutaneous type of lesions while 28% had fixed localized type and 1% had disseminated sporotrichosis. Presentation with lesions on hands was most frequently seen in 32% with arm (23%) and face (21%) in that sequence. The male to female ratio was 1∶1.27. Age ranged from 1 ½ years to 88 years. Mean age was 43.25 years. Disease was predominantly seen in the fourth to sixth decade of life with 58% cases between 31 and 60 years of age. Since the first report from the region there has been a steady rise in the number of cases of sporotrichosis. Seasonal trends reveal that most of the patients visited for consultation in the beginning of the year between March and April. This is the first study, from the most endemic region of the Sub-Himalayan belt, to delve into epidemiological and clinical details of such a large number of culture proven cases over a period of more than eighteen years which would help in the understanding of the local disease pattern of sporotrichosis.

  14. Sporotrichosis in sub-himalayan India.

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    Santwana Verma

    Full Text Available Sporotrichosis is endemic in the Sub-Himalayan belt, which ranges from the northern to the north-eastern Indian subcontinent. Similar to many parts of the developing world, sporotrichosis is commonly recognized clinically in this region however consolidated epidemiological data is lacking. We report epidemiological, clinical and microbiological data from a hundred culture positive cases of sporotrichosis. Out of 305 clinically suspicious cases of sporotrichosis, a total of 100 isolates were identified as Sporothrix schenckii species complex (S. schenckii on culture. Out of the culture proven cases 71% of the cases presented with lymphocutaneous type of lesions while 28% had fixed localized type and 1% had disseminated sporotrichosis. Presentation with lesions on hands was most frequently seen in 32% with arm (23% and face (21% in that sequence. The male to female ratio was 1∶1.27. Age ranged from 1 ½ years to 88 years. Mean age was 43.25 years. Disease was predominantly seen in the fourth to sixth decade of life with 58% cases between 31 and 60 years of age. Since the first report from the region there has been a steady rise in the number of cases of sporotrichosis. Seasonal trends reveal that most of the patients visited for consultation in the beginning of the year between March and April. This is the first study, from the most endemic region of the Sub-Himalayan belt, to delve into epidemiological and clinical details of such a large number of culture proven cases over a period of more than eighteen years which would help in the understanding of the local disease pattern of sporotrichosis.

  15. Into the Himalayan Exile: The Phylogeography of the Ground Beetle Ethira clade Supports the Tibetan Origin of Forest-Dwelling Himalayan Species Groups (United States)

    Schmidt, Joachim; Opgenoorth, Lars; Höll, Steffen; Bastrop, Ralf


    The Himalayan mountain arc is one of the hotspots of biodiversity on earth, and species diversity is expected to be especially high among insects in this region. Little is known about the origin of the Himalayan insect fauna. With respect to the fauna of high altitude cloud forests, it has generally been accepted that Himalayan lineages are derived from ancestors that immigrated from Western Asia and from adjacent mountainous regions of East and Southeast Asia (immigration hypothesis). In this study, we sought to test a Tibetan Origin as an alternative hypothesis for groups with a poor dispersal ability through a phylogeographic analysis of the Ethira clade of the genus Pterostichus. We sequenced COI mtDNA and the 18S and 28S rDNA genes in 168 Pterostichini specimens, including 46 species and subspecies of the Ethira clade. In our analysis, we were able to show that the Ethira clade is monophyletic and, thus, represents a Himalayan endemic clade, supporting endemism of two of the basal lineages to the Central Himalaya and documenting large distributional gaps within the phylogeographic structure of the Ethira clade. Furthermore, the molecular data strongly indicate very limited dispersal abilities of species and subspecies of these primary wingless ground beetles. These results are consistent with the hypothesis of a Tibetan Origin, which explains the evolution, diversity and distribution of the Himalayan ground beetle Ethira clade much more parsimoniously than the original immigration hypothesis. PMID:23049805

  16. Rational examination of the greater abdominal veins with 2D-TOF- and turbo-spin-echo sequences

    International Nuclear Information System (INIS)

    Lutterbey, G.; Sommer, T.; Keller, E.; Kuhl, C.; Schild, H.H.


    Purpose: Development of a fast and reliable protocol for the detection and exclusion of abdominal venous thrombosis with an optimised T 2 -TSE- and 2D-TOF sequence. Results: The most effective combination of strong flow-void phenomena, signal/noise ratio and scan time was found with the following parameters: T E 120 ms, T R 2000 ms, 5 mm slice gap. In the patient group two complete and two partial thromboses were diagnosed with both sequences. One wrong positive thrombosis occurred in a stenotic anastomosis with the 2D-inflow sequence. Conclusion: With optimum parameters the T 2 -TSE sequence produces a strong 'flow-void' phenomenon suitable for 'black-blood'-MRA. The use of this sequence alone or in combination with 2D-inflow MRA, if 'bright-blood' MRA is recommended, allows a reliable evaluation of thrombosis in abdominal veins without high-tech MRA equipment and contrast media. (orig./AJ) [de

  17. Poverty, development, and Himalayan ecosystems. (United States)

    Sandhu, Harpinder; Sandhu, Sukhbir


    The Himalayas are rich in biodiversity but vulnerable to anthropogenic pressures. They are also host to growing number of rural poor who are dependent on forest and ecosystem services for their livelihood. Local and global efforts to integrate poverty alleviation and biodiversity conservation in the Himalayas remain elusive so far. In this work, we highlight two key impediments in achieving sustainable development in the Himalayas. On the positive side, we also highlight the work of Ashoka Trust for Research in Ecology and the Environment (ATREE), a research organization based in India that seeks to integrate biodiversity concerns with livelihood security. For impediments, we draw on two examples from the Darjeeling district, India, in Eastern Himalayan region to illustrate how development organizations are failing to simultaneously address poverty and environmental issues. Based on the success of ATREE, we then propose a conceptual framework to integrate livelihood generating activities with sustainable and equitable development agenda. We recommend developing a Hindu-Kush Himalayan Ecosystem Services Network in the region to formulate a strategy for further action. We conclude by offering measures to address the challenge of integrating livelihood and environment issues through this network.

  18. Re-evaluation of P-T paths across the Himalayan Main Central Thrust (United States)

    Catlos, E. J.; Harrison, M.; Kelly, E. D.; Ashley, K.; Lovera, O. M.; Etzel, T.; Lizzadro-McPherson, D. J.


    The Main Central Thrust (MCT) is the dominant crustal thickening structure in the Himalayas, juxtaposing high-grade Greater Himalayan Crystalline rocks over the lower-grade Lesser Himalaya Formations. The fault is underlain by a 2 to 12-km-thick sequence of deformed rocks characterized by an apparent inverted metamorphic gradient, termed the MCT shear zone. Garnet-bearing rocks sampled from across the MCT along the Marysandi River in central Nepal contain monazite that decrease in age from Early Miocene (ca. 20 Ma) in the hanging wall to Late Miocene-Pliocene (ca. 7 Ma and 3 Ma) towards structurally lower levels in the shear zone. We obtained high-resolution garnet-zoning pressure-temperature (P-T) paths from 11 of the same rocks used for monazite geochronology using a recently-developed semi-automated Gibbs-free-energy-minimization technique. Quartz-in-garnet Raman barometry refined the locations of the paths. Diffusional re-equilibration of garnet zoning in hanging wall samples prevented accurate path determinations from most Greater Himalayan Crystalline samples, but one that shows a bell-shaped Mn zoning profile shows a slight decrease in P (from 8.2 to 7.6kbar) with increase in T (from 590 to 640ºC). Three MCT shear zone samples were modeled: one yields a simple path increasing in both P and T (6 to 7kbar, 540 to 580ºC); the others yield N-shaped paths that occupy similar P-T space (4 to 5.5 kbar, 500 to 560ºC). Five lower lesser Himalaya garnet-bearing rocks were modeled. One yields a path increasing in both P-T (6 to 7 kbar, 525 to 550ºC) but others show either sharp compression/decompression or N-shape paths (within 4.5-6 kbar and 530-580ºC). The lowermost sample decreases in P (5.5 to 5 kbar) over increasing T (540 to 580°C). No progressive change is seen from one type of path to another within the Lesser Himalayan Formations to the MCT zone. The results using the modeling approach yield lower P-T conditions compared to the Gibbs method and lower

  19. The importance of agricultural lands for Himalayan birds in winter. (United States)

    Elsen, Paul R; Kalyanaraman, Ramnarayan; Ramesh, Krishnamurthy; Wilcove, David S


    The impacts of land-use change on biodiversity in the Himalayas are poorly known, notwithstanding widespread deforestation and agricultural intensification in this highly biodiverse region. Although intact primary forests harbor many Himalayan birds during breeding, a large number of bird species use agricultural lands during winter. We assessed how Himalayan bird species richness, abundance, and composition during winter are affected by forest loss stemming from agriculture and grazing. Bird surveys along 12 elevational transects within primary forest, low-intensity agriculture, mixed subsistence agriculture, and intensively grazed pastures in winter revealed that bird species richness and abundance were greatest in low-intensity and mixed agriculture, intermediate in grazed pastures, and lowest in primary forest at both local and landscape scales; over twice as many species and individuals were recorded in low-intensity agriculture than in primary forest. Bird communities in primary forests were distinct from those in all other land-use classes, but only 4 species were unique to primary forests. Low-, medium-, and high-intensity agriculture harbored 32 unique species. Of the species observed in primary forest, 80% had equal or greater abundance in low-intensity agricultural lands, underscoring the value of these lands in retaining diverse community assemblages at high densities in winter. Among disturbed landscapes, bird species richness and abundance declined as land-use intensity increased, especially in high-intensity pastures. Our results suggest that agricultural landscapes are important for most Himalayan bird species in winter. But agricultural intensification-especially increased grazing-will likely result in biodiversity losses. Given that forest reserves alone may inadequately conserve Himalayan birds in winter, comprehensive conservation strategies in the region must go beyond protecting intact primary forests and ensure that low-intensity agricultural

  20. Greater than the sum of its parts: single-nucleus sequencing identifies convergent evolution of independent EGFR mutants in GBM. (United States)

    Gini, Beatrice; Mischel, Paul S


    Single-cell sequencing approaches are needed to characterize the genomic diversity of complex tumors, shedding light on their evolutionary paths and potentially suggesting more effective therapies. In this issue of Cancer Discovery, Francis and colleagues develop a novel integrative approach to identify distinct tumor subpopulations based on joint detection of clonal and subclonal events from bulk tumor and single-nucleus whole-genome sequencing, allowing them to infer a subclonal architecture. Surprisingly, the authors identify convergent evolution of multiple, mutually exclusive, independent EGFR gain-of-function variants in a single tumor. This study demonstrates the value of integrative single-cell genomics and highlights the biologic primacy of EGFR as an actionable target in glioblastoma. ©2014 American Association for Cancer Research.

  1. Case Report Associated with Aspergillosis and Hepatitis E Virus Coinfection in Himalayan Griffons

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    Heng Li


    Full Text Available This study involved a death which occurred in four Himalayan griffons housed in Beijing zoo, China. Based on pathogen identification and the pathological changes observed, we did characterize the fungi and Hepatitis E virus (HEV in four dead Himalayan griffons. Pathological changes were severe. Membranous-like material was observed on the surface of the internal organs. Spleen was necrotic. Focal lymphocyte infiltration in the liver and many sunflower-like fungi nodules were evident in the tissues, especially in the kidney. PCR was used to identify the pathogen. Based on the 18SrRNA genomic sequence of known fungi, the results confirmed that all four dead Himalayan griffons were infected with Aspergillus. At the same time the detection of HEV also showed positive results. To the best of our knowledge, this work appears to be the first report of concurrent presence of Aspergillosis and Hepatitis E virus in rare avian species.

  2. RIS and reservoirs in the NW and central Himalayan foothills

    International Nuclear Information System (INIS)

    Agrawal, R.C.


    There are nine (impounded) and three (under construction) tall (height exceeding 100 m) and large (capacity exceeding 1 km 3 ) reservoirs located in the northwestern and central Himalayan foothills. Natural earthquakes having magnitude greater than 7 have occurred in their vicinity in the past but there are no reports of reservoir associated seismic activity from a few of these sites which are under seismic surveillance following the guidelines of Indian Standard IS: 4967-1968. Case study of monitoring the seismicity around one site points to the need for rewriting the Standard. Reasons for non-occurrence of RIS in this seismically active environment are discussed. (author). 18 refs, 4 figs, 3 tabs

  3. Rising river flows throughout the twenty-first century in two Himalayan glacierized watersheds

    NARCIS (Netherlands)

    Immerzeel, W.W.|info:eu-repo/dai/nl/290472113; Pelliciotti, F.; Bierkens, M.F.P.|info:eu-repo/dai/nl/125022794


    Greater Himalayan glaciers are retreating and losing mass at rates comparable to glaciers in other regions of the world1–5 . Assessments of future changes and their associated hydrological impacts are scarce, oversimplify glacier dynamics or include a limited number of climate models6–9 . Here, we

  4. Molecular characterization of the Himalayan mink

    DEFF Research Database (Denmark)

    Benkel, Bernhard F.; Rouvinen-Watt, Kirsti; Farid, Hossain


    A rare color variant of the American mink (Neovison vison), discovered on a ranch in Nova Scotia and referred to as the "marbled" variety, carries a distinctive pigment distribution pattern resembling that found in some other species, e.g., the Siamese cat and the Himalayan mouse. We tested...... the hypothesis that the color pattern in question-light-colored body with dark-colored points (ears, face, tail, and feet)-is due to a mutation in the melanin-producing enzyme tyrosinase (TYR) that results in temperature-sensitive pigment production. Our study shows that marbled mink carry a mutation in exon 4...... of the TYR gene (c.1835C > G) which results in an amino acid substitution (p.H420Q). The location of this substitution corresponds to the amino acid position that is also mutated in the TYR protein of the Himalayan mouse. Thus, the marbled variant is more aptly referred to as the Himalayan mink....

  5. Development of 13 microsatellites for Gunnison Sage-grouse (Centrocercus minimus) using next-generation shotgun sequencing and their utility in Greater Sage-grouse (Centrocercus urophasianus) (United States)

    Fike, Jennifer A.; Oyler-McCance, Sara J.; Zimmerman, Shawna J; Castoe, Todd A.


    Gunnison Sage-grouse are an obligate sagebrush species that has experienced significant population declines and has been proposed for listing under the U.S. Endangered Species Act. In order to examine levels of connectivity among Gunnison Sage-grouse leks, we identified 13 novel microsatellite loci though next-generation shotgun sequencing, and tested them on the closely related Greater Sage-grouse. The number of alleles per locus ranged from 2 to 12. No loci were found to be linked, although 2 loci revealed significant departures from Hardy–Weinberg equilibrium or evidence of null alleles. While these microsatellites were designed for Gunnison Sage-grouse, they also work well for Greater Sage-grouse and could be used for numerous genetic questions including landscape and population genetics.

  6. Abrasion-set limits on Himalayan gravel flux. (United States)

    Dingle, Elizabeth H; Attal, Mikaël; Sinclair, Hugh D


    Rivers sourced in the Himalayan mountain range carry some of the largest sediment loads on the planet, yet coarse gravel in these rivers vanishes within approximately 10-40 kilometres on entering the Ganga Plain (the part of the North Indian River Plain containing the Ganges River). Understanding the fate of gravel is important for forecasting the response of rivers to large influxes of sediment triggered by earthquakes or storms. Rapid increase in gravel flux and subsequent channel bed aggradation (that is, sediment deposition by a river) following the 1999 Chi-Chi and 2008 Wenchuan earthquakes reduced channel capacity and increased flood inundation. Here we present an analysis of fan geometry, sediment grain size and lithology in the Ganga Basin. We find that the gravel fluxes from rivers draining the central Himalayan mountains, with upstream catchment areas ranging from about 350 to 50,000 square kilometres, are comparable. Our results show that abrasion of gravel during fluvial transport can explain this observation; most of the gravel sourced more than 100 kilometres upstream is converted into sand by the time it reaches the Ganga Plain. These findings indicate that earthquake-induced sediment pulses sourced from the Greater Himalayas, such as that following the 2015 Gorkha earthquake, are unlikely to drive increased gravel aggradation at the mountain front. Instead, we suggest that the sediment influx should result in an elevated sand flux, leading to distinct patterns of aggradation and flood risk in the densely populated, low-relief Ganga Plain.

  7. Simulation of a Himalayan cloudburst event

    Indian Academy of Sciences (India)

    Intense rainfall often leads to floods and landslides in the Himalayan region even with rainfall amounts that are considered comparatively moderate over the plains; for example, 'cloudbursts', which are devastating convective phenomena producing sudden high-intensity rainfall (∼10 cm per hour) over a small area.

  8. What happens along the flank and corner of a continental indenter? Insights from the easternmost Himalayan orogen and constraints on the models of the India-Asia collision (United States)

    Haproff, P. J.; Yin, A.; Zuza, A. V.


    Investigations of continental collisions often focus on thrust belts oriented perpendicular to the plate-convergence direction and exclude belts that bound the flanks of a continental indenter despite being crucial to understanding the collisional process. Research of the Himalayan orogen, for example, has mostly centered on the east-trending thrust belt between the eastern and western syntaxes, resulting in inadequate examination of the north-trending Indo-Burma Ranges located along the eastern margin of India. To better understand the development of the entire Himalayan orogenic system, we conducted field mapping across the Northern Indo-Burma Range (NIBR), situated at the intersection of the eastern Himalaya and Indo-Burma Ranges. Our research shows that major lithologic units and thrust faults of the Himalaya extend to the NIBR, suggesting a shared geologic evolution. The structural framework of the NIBR consists of a southwest-directed thrust belt cored by a hinterland-dipping duplex, like the Himalaya. However, the Northern Indo-Burma orogen is distinct based on (1) the absence of the Tethyan Himalayan Sequence and southern Gangdese batholith, (2) the absence of the South Tibetan detachment, (3) crustal shortening greater than 80%, (4) an incredibly narrow orogen width of 7-33 km, (5) exposure of an ophiolitic mélange complex as a klippe, (6) and right-slip shear along the active range-bounding thrust fault. Furthermore, lithospheric deformation along the flank and northeast corner of India is characterized by right-slip transpression partitioned between the thrust belt and right-slip faults. Such a regime is interpreted to accommodate both contraction and clockwise rotation of Tibetan lithosphere around India, consistent with existing continuum deformation and rotation models.

  9. Himalayan gneiss dome formation in the middle crust and exhumation by normal faulting: New geochronology of Gianbul dome, northwestern India (United States)

    Horton, Forrest; Lee, Jeffrey; Hacker, Bradley; Bowman-Kamaha'o, Meilani; Cosca, Michael A.


    A general lack of consensus about the origin of Himalayan gneiss domes hinders accurate thermomechanical modeling of the orogen. To test whether doming resulted from tectonic contraction (e.g., thrust duplex formation, antiformal bending above a thrust ramp, etc.), channel flow, or via the buoyant rise of anatectic melts, this study investigates the depth and timing of doming processes for Gianbul dome in the western Himalaya. The dome is composed of Greater Himalayan Sequence migmatite, Paleozoic orthogneiss, and metasedimentary rock cut by multiple generations of leucogranite dikes. These rocks record a major penetrative D2 deformational event characterized by a domed foliation and associated NE-SW–trending stretching lineation, and they are flanked by the top-down-to-the-SW (normal-sense) Khanjar shear zone and the top-down-to-the-NE (normal sense) Zanskar shear zone (the western equivalent of the South Tibetan detachment system). Monazite U/Th-Pb geochronology records (1) Paleozoic emplacement of the Kade orthogneiss and associated granite dikes; (2) prograde Barrovian metamorphism from 37 to 33 Ma; (3) doming driven by upper-crustal extension and positive buoyancy of decompression melts between 26 and 22 Ma; and (4) the injection of anatectic melts into the upper levels of the dome—neutralizing the effects of melt buoyancy and potentially adding strength to the host rock—by ca. 22.6 Ma on the southwestern flank and ca. 21 Ma on the northeastern flank. As shown by a northeastward decrease in 40Ar/39Ar muscovite dates from 22.4 to 20.2 Ma, ductile normal-sense displacement within the Zanskar shear zone ended by ca. 22 Ma, after which the Gianbul dome was exhumed as part of a rigid footwall block below the brittle Zanskar normal fault, tilting an estimated 5°–10°SW into its present orientation.

  10. Assessment of CORDEX-South Asia experiments for monsoonal precipitation over Himalayan region for future climate (United States)

    Choudhary, A.; Dimri, A. P.


    Precipitation is one of the important climatic indicators in the global climate system. Probable changes in monsoonal (June, July, August and September; hereafter JJAS) mean precipitation in the Himalayan region for three different greenhouse gas emission scenarios (i.e. representative concentration pathways or RCPs) and two future time slices (near and far) are estimated from a set of regional climate simulations performed under Coordinated Regional Climate Downscaling Experiment-South Asia (CORDEX-SA) project. For each of the CORDEX-SA simulations and their ensemble, projections of near future (2020-2049) and far future (2070-2099) precipitation climatology with respect to corresponding present climate (1970-2005) over Himalayan region are presented. The variability existing over each of the future time slices is compared with the present climate variability to determine the future changes in inter annual fluctuations of monsoonal mean precipitation. The long-term (1970-2099) trend (mm/day/year) of monsoonal mean precipitation spatially distributed as well as averaged over Himalayan region is analyzed to detect any change across twenty-first century as well as to assess model uncertainty in simulating the precipitation changes over this period. The altitudinal distribution of difference in trend of future precipitation from present climate existing over each of the time slices is also studied to understand any elevation dependency of change in precipitation pattern. Except for a part of the Hindu-Kush area in western Himalayan region which shows drier condition, the CORDEX-SA experiments project in general wetter/drier conditions in near future for western/eastern Himalayan region, a scenario which gets further intensified in far future. Although, a gradually increasing precipitation trend is seen throughout the twenty-first century in carbon intensive scenarios, the distribution of trend with elevation presents a very complex picture with lower elevations

  11. Catastrophic valley fills record large Himalayan earthquakes, Pokhara, Nepal (United States)

    Stolle, Amelie; Bernhardt, Anne; Schwanghart, Wolfgang; Hoelzmann, Philipp; Adhikari, Basanta R.; Fort, Monique; Korup, Oliver


    Uncertain timing and magnitudes of past mega-earthquakes continue to confound seismic risk appraisals in the Himalayas. Telltale traces of surface ruptures are rare, while fault trenches document several events at best, so that additional proxies of strong ground motion are needed to complement the paleoseismological record. We study Nepal's Pokhara basin, which has the largest and most extensively dated archive of earthquake-triggered valley fills in the Himalayas. These sediments form a 148-km2 fan that issues from the steep Seti Khola gorge in the Annapurna Massif, invading and plugging 15 tributary valleys with tens of meters of debris, and impounding several lakes. Nearly a dozen new radiocarbon ages corroborate at least three episodes of catastrophic sedimentation on the fan between ∼700 and ∼1700 AD, coinciding with great earthquakes in ∼1100, 1255, and 1344 AD, and emplacing roughly >5 km3 of debris that forms the Pokhara Formation. We offer a first systematic sedimentological study of this formation, revealing four lithofacies characterized by thick sequences of mid-fan fluvial conglomerates, debris-flow beds, and fan-marginal slackwater deposits. New geochemical provenance analyses reveal that these upstream dipping deposits of Higher Himalayan origin contain lenses of locally derived river clasts that mark time gaps between at least three major sediment pulses that buried different parts of the fan. The spatial pattern of 14C dates across the fan and the provenance data are key to distinguishing these individual sediment pulses, as these are not evident from their sedimentology alone. Our study demonstrates how geomorphic and sedimentary evidence of catastrophic valley infill can help to independently verify and augment paleoseismological fault-trench records of great Himalayan earthquakes, while offering unparalleled insights into their long-term geomorphic impacts on major drainage basins.

  12. Evolution of the Paleogene succession of the western Himalayan foreland basin

    Directory of Open Access Journals (Sweden)

    B.P. Singh


    Full Text Available The Paleogene succession of the Himalayan foreland basin is immensely important as it preserves evidence of India-Asia collision and related records of the Himalayan orogenesis. In this paper, the depositional regime of the Paleogene succession of the Himalayan foreland basin and variations in composition of the hinterland at different stages of the basin developments are presented. The Paleogene succession of the western Himalayan foreland basin developed in two stages, i.e. syn-collisional stage and post-collisional stage. At the onset, chert breccia containing fragments derived from the hanging walls of faults and reworked bauxite developed as a result of erosion of the forebulge. The overlying early Eocene succession possibly deposited in a coastal system, where carbonates represent barriers and shales represent lagoons. Up-section, the middle Eocene marl beds likely deposited on a tidal flat. The late Eocene/Oligocene basal Murree beds, containing tidal bundles, indicate that a mixed or semi-diurnal tidal system deposited the sediments and the sedimentation took place in a tide-dominated estuary. In the higher-up, the succession likely deposited in a river-dominated estuary or in meandering rivers. In the beginning of the basin evolution, the sediments were derived from the Precambrian basement or from the metasediments/volcanic rocks possessing terrains of the south. The early and middle Eocene (54.7–41.3 Ma succession of the embryonic foreland possibly developed from the sediments derived from the Trans-Himalayan schists and phyllites and Indus ophiolite of the north during syn-collisional stage. The detrital minerals especially the lithic fragments and the heavy minerals suggest the provenance for the late Eocene/Oligocene sequences to be from the recycled orogenic belt of the Higher Himalaya, Tethyan Himalaya and the Indus-suture zone from the north during post-collisional stage. This is also supported by the paleocurrent

  13. Rhizospheric Bacterial Community of Endemic Rhododendron arboreum Sm. Ssp. delavayi along Eastern Himalayan Slope in Tawang

    Directory of Open Access Journals (Sweden)

    Rajal Debnath


    Full Text Available Information on rhizosphere micobiome of endemic plants from high mountain ecosystems against those of cultivated plantations is inadequate. Comparative bacterial profiles of endemic medicinal plant R. arboreum Sm. subsp. delavayi rhizosphere pertaining to four altitudinal zonation Pankang-Thang (PTSO, Nagula, Y-junction and Bum La (Indo-China border (in triplicates each along cold adapted Eastern slope of Himalayan Tawang region, India is described here. Significant differences in DGGE profile between below ground bulk vs rhizospheric community profile associated with the plant was identified. Tagged 16S amplicon sequencing from PTSO (3912m to Bum La (4509 m, revealed that soil pH, total nitrogen (TN, organic matter (OM significantly influenced the underlying bacterial community structure at different altitudes. The relative abundance of Acidobacteria was inversely related to pH, as opposed to TN which was positively correlated to Acidobacteria and Proteobacteria abundance. TN was also the significant predictor for less abundant taxonomic groups Chloroflexi, Gemmatimonadetes and Nitrospirae. Bum La soil harbored less bacterial diversity compared to other sites at lower altitudes. The most abundant phyla at 3% genetic difference were Acidobacteria, Actinobacteria and Proteobacteria amongst others. Analysis of similarity indicated greater similarity within lower altitudinal than higher altitudinal group (ANOSIM, R = 0.287, p = 0.02. Constraining the ordination with the edaphic factor explained 83.13% of variation. Unique phylotypes of Bradyrhizobium and uncultured Rhizobiales were found in significant proportions at the four regions. With over 1% relative abundance Actinobacteria (42.6%, Acidobacteria (24.02%, Proteobacteria (16.00%, AD3 (9.23%, WPS-2 (5.1% and Chloroflexi (1.48% dominated the core microbiome.

  14. Himalayan origin and evolution of Myricaria (Tamaricaeae in the neogene.

    Directory of Open Access Journals (Sweden)

    Ming-Li Zhang

    Full Text Available BACKGROUND: Myricaria consists of about twelve-thirteen species and occurs in Eurasian North Temperate zone, most species in the Qinghai-Tibet Plateau (QTP and adjacent areas. METHODOLOGY/PRINCIPAL FINDINGS: Twelve species of Myricaria plus two other genera Tamarix and Reaumuria in Tamaricaceae, were sampled, and four markers, ITS, rps16, psbB-psbH, and trnL-trnF were sequenced. The relaxed Bayesian molecular clock BEAST method was used to perform phylogenetic analysis and molecular dating, and Diva, S-Diva, and maximum likelihood Lagrange were used to estimate the ancestral area. The results indicated that Myricaria could be divided into four phylogenetic clades, which correspond to four sections within the genus, of them two are newly described in this paper. The crown age of Myricaria was dated to early Miocene ca. 20 Ma, at the probable early uplifting time of the Himalayas. The Himalayas were also shown as the center of origin for Myricaria from the optimization of ancestral distribution. Migration and dispersal of Myricaria were indicated to have taken place along the Asian Mountains, including the Himalayas, Kunlun, Altun, Hendukosh, Tianshan, Altai, and Caucasus etc., westward to Europe, eastward to Central China, and northward to the Mongolian Plateau. CONCLUSIONS/SIGNIFICANCE: Myricaria spatiotemporal evolution presented here, especially the Himalayan origin at early Miocene ca. 20 Ma, and then migrated westward and eastward along the Asian mountains, offers a significant evolutionary case for QTP and Central Asian biogeography.

  15. Testing the effect of the Himalayan mountains as a physical barrier to gene flow in Hippophae tibetana Schlect. (Elaeagnaceae.

    Directory of Open Access Journals (Sweden)

    La Qiong

    Full Text Available Hippophae tibetana is a small, dioecious wind-pollinated shrub endemic to the Tibetan-Qinghai Plateau. It is one of the shrubs that occur at very high elevations (5250 m a.s.l.. The Himalayan mountains provides a significant geographical barrier to the Qinghai-Tibetan Plateau, dividing the Himalayan area into two regions with Nepal to the south and Tibet to the north. There is no information on how the Himalayan mountains influence gene flow and population differentiation of alpine plants. In this study, we analyzed eight nuclear microsatellite markers and cpDNA trnT-trnF regions to test the role of the Himalayan mountains as a barrier to gene flow between populations of H. tibetana. We also examined the fine-scale genetic structure within a population of H. tibetana on the north slope of Mount (Mt. Everest. For microsatellite analyses, a total of 241 individuals were sampled from seven populations in our study area (4 from Nepal, 3 from Tibet, including 121 individuals that were spatially mapped within a 100 m × 100 m plot. To test for seed flow, the cpDNA trnT-trnF regions of 100 individuals from 6 populations (4 from Nepal, 2 from Tibet were also sequenced. Significant genetic differentiation was detected between the two regions by both microsatellite and cpDNA data analyses. These two datasets agree about southern and northern population differentiation, indicating that the Himalayan mountains represent a barrier to H. tibetana limiting gene flow between these two areas. At a fine scale, spatial autocorrelation analysis suggests significant genetic structure within a distance of less than 45 m, which may be attributed mainly to vegetative reproduction and habitat fragmentation, as well as limited gene flow.

  16. Radiation countermeasures from Himalayan herbs - an update

    International Nuclear Information System (INIS)

    Madhu Bala


    A successful radioprotector is the one, which essentially renders protection from the multi-organ dis-function syndrome (MODS) caused by the total body exposure to ionizing radiation. Our rationale is that and instead of a single molecule, a group of molecules/compounds working synergistically can combat the MODS more effectively. Plant extracts offer natural combinations of a plethora of compounds, which act through different mechanisms and are, therefore, the ideal choice. Plants of Himalayan regions have survived under extreme climatic conditions through millions of years and are expected to harbor a battery of anti-stress adaptive molecules offering survival benefits. Our group is actively engaged in developing composite herbal radioprotective preparations from Himalayan Plants. This group is working to develop radiation countermeasures by tapping the essential complex phytochemicals from the plants inhabiting extreme climatic zones of Himalayas. In our laboratory, systematic studies were undertaken to investigate some of these plants located at high altitude regions of Himalayas viz. Hippophae rhamnoides, Rhodiola imbricata and Podophylium hexandruin. The most effective preparation from each of these plants individually, could provide more than 80% survival benefit to the irradiated (10 Gy) mice population against zero per cent survival in non-drug treated irradiated (10 Gy) mice population. It was observed that whole extracts of plant provided much better protection than the partial extracts/fractions. It was also observed that some of the partial extracts/fractions although, provided much higher survival benefits, yet were found to be unsuitable for drug development due to much higher mutagenic and/or recombinogenic effects in comparison to the whole extracts, One of the preparations from leaves of Hippophae rhamnoides (drug) showed more than 90% survival benefits in the irradiated mice population. Only one time intra-peritoneal administration of the drug

  17. Chemical characterisation of himalayan rock salt

    International Nuclear Information System (INIS)

    Hassan, A.U.; Din, M.U.


    Present study involves the chemical evaluation of rock salt samples collected from the plugging sites of Himalayan salt (Khewra salt mines and Kalabagh salt mines) for their moisture content, water insoluble matter, calcium, magnesium, sulphate content and trace minerals such as Fe,Cu,Cd,Pb,As,Ag and Zn determined by atomic absorption spectroscopy. Moisture content of Khewra and Kalabagh salt samples ranged from 0.03 wt. % to 0.09 wt. % and 0.06 % to 0.08 %, respectively. Water insoluble matter ranged from 0.08 wt. % to 1.4 wt. % and 1.5 wt. % to 2.8wt. % for Khewra and Kalabagh salt samples, respectively. Sulphate content for Khewra salt sample was from 0.39 % to 0.91 % and for Kalabagh salt mines from 0.75 wt. % to 0.95 wt. %. For Khewra salt mines calcium ranged 0.15 wt. % to 0.32 wt. % and for Kalabagh salt samples from 0.1 wt. % to 0.27 wt. %. Magnesium ranged from 0.11 wt. % to 0.35 wt. % for Khewra salt mines, while for Kalabagh salt samples its range was 0.18 wt. % to 0.89 wt. %. Trace metals had the concentration ranges between 0.2 to 1.85 mg/kg for copper; between 0.21 to 0.42 mg/kg for manganese; between 0.04 to 0.06 mg/kg for zinc; between 0.12 to 0.18 mg/kg for arsenic and between 0.03 and 0.05 mg/kg for lead while cadmium content was either below the method's detection limits or in very trace amounts. The results show that the concentrations of all the parameters studied are below the limits set by World Health Organization (WHO) and Food and Agriculture Organization (FAO). Therefore, it can be concluded from the paper that the Himalayan salt from the plugging sites of Khewra and Kalabagh salt mines are safe to use. (author)

  18. Transport of regional pollutants through a remote trans-Himalayan valley in Nepal (United States)

    Dhungel, Shradda; Kathayat, Bhogendra; Mahata, Khadak; Panday, Arnico


    Anthropogenic emissions from the combustion of fossil fuels and biomass in Asia have increased in recent years. High concentrations of reactive trace gases and light-absorbing and light-scattering particles from these sources form persistent haze layers, also known as atmospheric brown clouds, over the Indo-Gangetic plains (IGP) from December through early June. Models and satellite imagery suggest that strong wind systems within deep Himalayan valleys are major pathways by which pollutants from the IGP are transported to the higher Himalaya. However, observational evidence of the transport of polluted air masses through Himalayan valleys has been lacking to date. To evaluate this pathway, we measured black carbon (BC), ozone (O3), and associated meteorological conditions within the Kali Gandaki Valley (KGV), Nepal, from January 2013 to July 2015. BC and O3 varied over both diurnal and seasonal cycles. Relative to nighttime, mean BC and O3 concentrations within the valley were higher during daytime when the up-valley flow (average velocity of 17 m s-1) dominated. BC and O3 concentrations also varied seasonally with minima during the monsoon season (July to September). Concentrations of both species subsequently increased post-monsoon and peaked during March to May. Average concentrations for O3 during the seasonally representative months of April, August, and November were 41.7, 24.5, and 29.4 ppbv, respectively, while the corresponding BC concentrations were 1.17, 0.24, and 1.01 µg m-3, respectively. Up-valley fluxes of BC were significantly greater than down-valley fluxes during all seasons. In addition, frequent episodes of BC concentrations 2-3 times higher than average persisted from several days to a week during non-monsoon months. Our observations of increases in BC concentration and fluxes in the valley, particularly during pre-monsoon, provide evidence that trans-Himalayan valleys are important conduits for transport of pollutants from the IGP to the

  19. Himalayan Strain Accumulation 100 ka Timescales (United States)

    Cannon, J. M.; Murphy, M. A.; Liu, Y.


    Crustal scale fault systems and tectonostratigraphic units in the Himalaya can be traced for 2500 km along strike. However regional studies have shown that there is variability in the location and rate of strain accumulation which appears to be driven by Main Himalayan Thrust (MHT) geometry and convergence obliquity. GPS illuminates the modern interseismic strain rate and the historical record of great earthquakes elucidates variations in strain accumulation over 103 years. To connect these patterns with the 106 year structural and thermochronometric geologic record we examine normalized river channel steepness (ksn), a proxy for rock uplift rate, which develops over 104 - 105 years. Here we present a ksn map of the Himalaya and compare it with bedrock geology, precipitation, the historic earthquake record, GPS, seismicity, and seismotectonic models. Our map shows significant along strike changes in the magnitude of channel steepness, the areal extent of swaths of high ksn channels, and their location with respect to the range front. Differences include the juxtaposition of two narrow (30 - 40 km) range parallel belts of high ksn in west Nepal and Bhutan coincident with MHT duplexes and belts of microseismcity, with a single broad (70 km) swath of high ksn and microseismicity in central and eastern Nepal. Separating west and central Nepal a band of low ksn crosses the range coincident with the West Nepal Fault (WNF) and the lowest rate of microseismicity in Nepal. To the west the orogen is obliquely convergent and has less high ksn channels, while the orthogonally convergent region to the east contains the highest concentration of oversteepened channels in the Himalaya supporting the idea that the WNF is a strain partitioning boundary. The syntaxes are characterized by locally high channel steepness surrounded by low to moderate ksn channels consistent with the hypothesis that rapid exhumation within the syntaxes is sustained by an influx of lower crust.

  20. Late Triassic sedimentary records in the northern Tethyan Himalaya: Tectonic link with Greater India

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    Huawen Cao


    Full Text Available The Upper Triassic flysch sediments (Nieru Formation and Langjiexue Group exposed in the Eastern Tethyan Himalayan Sequence are crucial for unraveling the controversial paleogeography and paleotectonics of the Himalayan orogen. This work reports new detrital zircon U-Pb ages and whole-rock geochemical data for clastic rocks from flysch strata in the Shannan area. The mineral modal composition data suggest that these units were mainly sourced from recycled orogen provenances. The chemical compositions of the sandstones in the strata are similar to the chemical composition of upper continental crust. These rocks have relatively low Chemical Index of Alteration values (with an average of 62 and Index of Compositional Variability values (0.69, indicating that they experienced weak weathering and were mainly derived from a mature source. The geochemical compositions of the Upper Triassic strata are similar to those of graywackes from continental island arcs and are indicative of an acidic-intermediate igneous source. Furthermore, hornblende and feldspar experienced decomposition in the provenance, and the sediment became enriched in zircon and monazite during sediment transport. The detrital zircons in the strata feature two main age peaks at 225–275 Ma and 500–600 Ma, nearly continuous Paleoproterozoic to Neoproterozoic ages, and a broad inconspicuous cluster in the Tonian–Stenian (800–1200 Ma. The detrital zircons from the Upper Triassic sandstones in the study area lack peaks at 300–325 Ma (characteristic of the Lhasa block and 1150–1200 Ma (characteristic of the Lhasa and West Australia blocks. Therefore, neither the Lhasa block nor the West Australia blocks likely acted as the main provenance of the Upper Triassic strata. Newly discovered Permian–Triassic basalt and mafic dikes in the Himalayas could have provided the 225–275 Ma detrital zircons. Therefore, Indian and Himalayan units were the main provenances of the flysch

  1. Zircon (U-Th)/He Thermochronometric Constraints on Himalayan Thrust Belt Exhumation, Bedrock Weathering, and Cenozoic Seawater Chemistry (United States)

    Colleps, Cody L.; McKenzie, N. Ryan; Stockli, Daniel F.; Hughes, Nigel C.; Singh, Birendra P.; Webb, A. Alexander G.; Myrow, Paul M.; Planavsky, Noah J.; Horton, Brian K.


    Shifts in global seawater 187Os/188Os and 87Sr/86Sr are often utilized as proxies to track global weathering processes responsible for CO2 fluctuations in Earth history, particularly climatic cooling during the Cenozoic. It has been proposed, however, that these isotopic records instead reflect the weathering of chemically distinctive Himalayan lithologies exposed at the surface. We present new zircon (U-Th)/He thermochronometric and detrital zircon U-Pb geochronologic evidence from the Himalaya of northwest India to explore these contrasting interpretations concerning the driving mechanisms responsible for these seawater records. Our data demonstrate in-sequence southward thrust propagation with rapid exhumation of Lesser Himalayan strata enriched in labile 187Os and relatively less in radiogenic 87Sr at ˜16 Ma, which directly corresponds with coeval shifts in seawater 187Os/188Os and 87Sr/86Sr. Results presented here provide substantial evidence that the onset of exhumation of 187Os-enriched Lesser Himalayan strata could have significantly impacted the marine 187Os/188Os record at 16 Ma. These results support the hypothesis that regional weathering of isotopically unique source rocks can drive seawater records independently from shifts in global-scale weathering rates, hindering the utility of these records as reliable proxies to track global weathering processes and climate in deep geologic time.

  2. Orogen-transverse tectonic window in the Eastern Himalayan fold belt: A superposed buckling model (United States)

    Bose, Santanu; Mandal, Nibir; Acharyya, S. K.; Ghosh, Subhajit; Saha, Puspendu


    The Eastern Lesser Himalayan fold-thrust belt is punctuated by a row of orogen-transverse domal tectonic windows. To evaluate their origin, a variety of thrust-stack models have been proposed, assuming that the crustal shortening occurred dominantly by brittle deformations. However, the Rangit Window (RW) in the Darjeeling-Sikkim Himalaya (DSH) shows unequivocal structural imprints of ductile deformations of multiple episodes. Based on new structural maps, coupled with outcrop-scale field observations, we recognize at least four major episodes of folding in the litho-tectonic units of DSH. The last episode has produced regionally orogen-transverse upright folds (F4), the interference of which with the third-generation (F3) orogen-parallel folds has shaped the large-scale structural patterns in DSH. We propose a new genetic model for the RW, invoking the mechanics of superposed buckling in the mechanically stratified litho-tectonic systems. We substantiate this superposed buckling model with results obtained from analogue experiments. The model explains contrasting F3-F4 interferences in the Lesser Himalayan Sequence (LHS). The lower-order (terrain-scale) folds have undergone superposed buckling in Mode 1, producing large-scale domes and basins, whereas the RW occurs as a relatively higher-order dome nested in the first-order Tista Dome. The Gondwana and the Proterozoic rocks within the RW underwent superposed buckling in Modes 3 and 4, leading to Type 2 fold interferences, as evident from their structural patterns.

  3. Plant diversity and conservation status of Himalayan Region Poonch Valley Azad Kashmir (Pakistan). (United States)

    Khan, Muhammad Azam; Khan, Mir Ajab; Hussain, Mazhar; Mujtaba, Ghulam


    The plant diversity of Himalayan region has been reduced to greater extent due to environmental degradation and human exploitation. Anthropogenic disturbance was the major factor responsible for fragmentation of forest vegetation into small patches. Little research has been conducted in the Himalayan region of Poonch Valley of North eastern Pakistan with reference to plants biodiversity and its conservation. The present research was carried out to provide a checklist of vegetation for biodiversity conservation. A total of 430 vascular and 5 nonvascular plant species with 5 species of Bryophytes (5 families), 13 species of Pteridophytes (6 families), 4 species of Gymnosperms (1 family) and 413 species of angiosperms (95 families) were enumerated from the Poonch valley Azad Kashmir. The genera were classified into three categories according to the number of species. 25 plant communities with phytosociological parameters and diversity indices were reported. Present study revealed that there were 145 threatened, 30 endangered, 68 vulnerable and 47 rare species. It is recorded that extensive grazing, uprooting of plants and soil slope erosion intensify the environmental problems. Since there is maximum exploitation of vegetation, the valley showed a decline in plant diversity. The study was also indicated that the main threats to the biodiversity are expansion of settlement and army installations in the forest area of the valley. For sustainable use In-situ and Ex-situ conservation, controlled harvesting and afforestation may be the solution. Moreover, forest area should be declared prohibited for settlements and army installations.

  4. Extreme heterogeneity in Sr isotope systematic in the Himalayan ...

    Indian Academy of Sciences (India)

    R. Narasimhan, Krishtel eMaging Solutions

    due to post-collision partial melting within the Himalayan crust. ... plutons occur in two linear belts either close to ... can explain, even in outcrop scale, the observed ... between the northern Eurasian plate and the southern Indian plate. ... (b) Thrusting model and boundary conditions used for calculating transient geotherms.

  5. Developing an inverted Barrovian sequence; insights from monazite petrochronology (United States)

    Mottram, Catherine M.; Warren, Clare J.; Regis, Daniele; Roberts, Nick M. W.; Harris, Nigel B. W.; Argles, Tom W.; Parrish, Randall R.


    In the Himalayan region of Sikkim, the well-developed inverted metamorphic sequence of the Main Central Thrust (MCT) zone is folded, thus exposing several transects through the structure that reached similar metamorphic grades at different times. In-situ LA-ICP-MS U-Th-Pb monazite ages, linked to pressure-temperature conditions via trace-element reaction fingerprints, allow key aspects of the evolution of the thrust zone to be understood for the first time. The ages show that peak metamorphic conditions were reached earliest in the structurally highest part of the inverted metamorphic sequence, in the Greater Himalayan Sequence (GHS) in the hanging wall of the MCT. Monazite in this unit grew over a prolonged period between ∼37 and 16 Ma in the southerly leading-edge of the thrust zone and between ∼37 and 14.5 Ma in the northern rear-edge of the thrust zone, at peak metamorphic conditions of ∼790 °C and 10 kbar. Monazite ages in Lesser Himalayan Sequence (LHS) footwall rocks show that identical metamorphic conditions were reached ∼4-6 Ma apart along the ∼60 km separating samples along the MCT transport direction. Upper LHS footwall rocks reached peak metamorphic conditions of ∼655 °C and 9 kbar between ∼21 and 16 Ma in the more southerly-exposed transect and ∼14.5-12 Ma in the northern transect. Similarly, lower LHS footwall rocks reached peak metamorphic conditions of ∼580 °C and 8.5 kbar at ∼16 Ma in the south, and 9-10 Ma in the north. In the southern transect, the timing of partial melting in the GHS hanging wall (∼23-19.5 Ma) overlaps with the timing of prograde metamorphism (∼21 Ma) in the LHS footwall, confirming that the hanging wall may have provided the heat necessary for the metamorphism of the footwall. Overall, the data provide robust evidence for progressively downwards-penetrating deformation and accretion of original LHS footwall material to the GHS hanging wall over a period of ∼5 Ma. These processes appear to have

  6. Conflicts between traditional pastoralism and conservation of Himalayan ibex (Capra sibirica) in the Trans-Himalayan mountains

    NARCIS (Netherlands)

    Bagchi, S.; Mishra, C.; Bhatnagar, Y.V.


    There is recent evidence to suggest that domestic livestock deplete the density and diversity of wild herbivores in the cold deserts of the Trans-Himalaya by imposing resource limitations. To ascertain the degree and nature of threats faced by Himalayan ibex (Capra sibirica) from seven livestock

  7. Adoption of Geospatial Systems towards evolving Sustainable Himalayan Mountain Development (United States)

    Murthy, M. S. R.; Bajracharya, B.; Pradhan, S.; Shestra, B.; Bajracharya, R.; Shakya, K.; Wesselmann, S.; Ali, M.; Bajracharya, S.; Pradhan, S.


    Natural resources dependence of mountain communities, rapid social and developmental changes, disaster proneness and climate change are conceived as the critical factors regulating sustainable Himalayan mountain development. The Himalayan region posed by typical geographic settings, diverse physical and cultural diversity present a formidable challenge to collect and manage data, information and understands varied socio-ecological settings. Recent advances in earth observation, near real-time data, in-situ measurements and in combination of information and communication technology have transformed the way we collect, process, and generate information and how we use such information for societal benefits. Glacier dynamics, land cover changes, disaster risk reduction systems, food security and ecosystem conservation are a few thematic areas where geospatial information and knowledge have significantly contributed to informed decision making systems over the region. The emergence and adoption of near-real time systems, unmanned aerial vehicles (UAV), board-scale citizen science (crowd-sourcing), mobile services and mapping, and cloud computing have paved the way towards developing automated environmental monitoring systems, enhanced scientific understanding of geophysical and biophysical processes, coupled management of socio-ecological systems and community based adaptation models tailored to mountain specific environment. There are differentiated capacities among the ICIMOD regional member countries with regard to utilization of earth observation and geospatial technologies. The region can greatly benefit from a coordinated and collaborative approach to capture the opportunities offered by earth observation and geospatial technologies. The regional level data sharing, knowledge exchange, and Himalayan GEO supporting geospatial platforms, spatial data infrastructure, unique region specific satellite systems to address trans-boundary challenges would go a long way in

  8. Transport of regional pollutants through a remote trans-Himalayan valley in Nepal

    Directory of Open Access Journals (Sweden)

    S. Dhungel


    Full Text Available Anthropogenic emissions from the combustion of fossil fuels and biomass in Asia have increased in recent years. High concentrations of reactive trace gases and light-absorbing and light-scattering particles from these sources form persistent haze layers, also known as atmospheric brown clouds, over the Indo–Gangetic plains (IGP from December through early June. Models and satellite imagery suggest that strong wind systems within deep Himalayan valleys are major pathways by which pollutants from the IGP are transported to the higher Himalaya. However, observational evidence of the transport of polluted air masses through Himalayan valleys has been lacking to date. To evaluate this pathway, we measured black carbon (BC, ozone (O3, and associated meteorological conditions within the Kali Gandaki Valley (KGV, Nepal, from January 2013 to July 2015. BC and O3 varied over both diurnal and seasonal cycles. Relative to nighttime, mean BC and O3 concentrations within the valley were higher during daytime when the up-valley flow (average velocity of 17 m s−1 dominated. BC and O3 concentrations also varied seasonally with minima during the monsoon season (July to September. Concentrations of both species subsequently increased post-monsoon and peaked during March to May. Average concentrations for O3 during the seasonally representative months of April, August, and November were 41.7, 24.5, and 29.4 ppbv, respectively, while the corresponding BC concentrations were 1.17, 0.24, and 1.01 µg m−3, respectively. Up-valley fluxes of BC were significantly greater than down-valley fluxes during all seasons. In addition, frequent episodes of BC concentrations 2–3 times higher than average persisted from several days to a week during non-monsoon months. Our observations of increases in BC concentration and fluxes in the valley, particularly during pre-monsoon, provide evidence that trans-Himalayan valleys are important conduits for transport of

  9. Modeling hydrology, groundwater recharge and non-point nitrate loadings in the Himalayan Upper Yamuna basin

    International Nuclear Information System (INIS)

    Narula, Kapil K.; Gosain, A.K.


    The mountainous Himalayan watersheds are important hydrologic systems responsible for much of the water supply in the Indian sub-continent. These watersheds are increasingly facing anthropogenic and climate-related pressures that impact spatial and temporal distribution of water availability. This study evaluates temporal and spatial distribution of water availability including groundwater recharge and quality (non-point nitrate loadings) for a Himalayan watershed, namely, the Upper Yamuna watershed (part of the Ganga River basin). The watershed has an area of 11 600 km 2 with elevation ranging from 6300 to 600 m above mean sea level. Soil and Water Assessment Tool (SWAT), a physically-based, time-continuous model, has been used to simulate the land phase of the hydrological cycle, to obtain streamflows, groundwater recharge, and nitrate (NO 3 ) load distributions in various components of runoff. The hydrological SWAT model is integrated with the MODular finite difference groundwater FLOW model (MODFLOW), and Modular 3-Dimensional Multi-Species Transport model (MT3DMS), to obtain groundwater flow and NO 3 transport. Validation of various modules of this integrated model has been done for sub-basins of the Upper Yamuna watershed. Results on surface runoff and groundwater levels obtained as outputs from simulation show a good comparison with the observed streamflows and groundwater levels (Nash–Sutcliffe and R 2 correlations greater than + 0.7). Nitrate loading obtained after nitrification, denitrification, and NO 3 removal from unsaturated and shallow aquifer zones is combined with groundwater recharge. Results for nitrate modeling in groundwater aquifers are compared with observed NO 3 concentration and are found to be in good agreement. The study further evaluates the sensitivity of water availability to climate change. Simulations have been made with the weather inputs of climate change scenarios of A2, B2, and A1B for end of the century. Water yield estimates

  10. Detrital-zircon fission-track geochronology of the Lower Cenozoic sediments, NW Himalayan foreland basin: Clues for exhumation and denudation of the Himalaya during the India-Asia collision (United States)

    Jain, A.; Lal, N.; Suelmani, B.; Awasthi, A. K.; Singh, S.; Kumar, R.


    evidences of the Pre-Himalayan Peaks in zircon FT ages and appear to be responsible for incoming of the Himalayan (HP) ~30.0 Ma and Young Himalayan Peaks (YHP) of ~15.0 Ma, respectively; the latter appears only between 13.0 and 11.0 Ma sedimentation of the Lower Siwalik Formation. Three distinct metamorphic events get recognised in source area of the Himalayan Metamorphic Belt. Though the Dagshai-Kasauli-Lower Siwalik sequence records uninterrupted fluvial sedimentation since 30 Ma, distinct breaks in zircon FT ages ~5.0-7.0 Myr at the beginning of each formation records pulsative exhumation of the source area in response to the collision between India and Asia.

  11. Taking a step back: Himalayan erosion as seen from Bangladesh (United States)

    Lupker, M.; France-Lanord, C.; Lavé, J.; Blard, P.; Galy, V.


    The Himalayan range represents the archetype of mountain building and is considered in many studies as the locus of intense interactions between climate, denudation and tectonics. A better understanding of these interactions requires that the flux of material removed from the system through erosion is known. The products of Himalayan erosion are exported to the Bengal fan and the Indian Ocean by two major rivers: the Ganga and Brahmaputra. These rivers provide the opportunity to quantify the Himalayan denudation rates as they integrate surface and tectonic processes across the entire basin. Basin wide erosion or denudation rates have classically been derived from the gauging of sediments fluxes. By coping with the inherent spatial and temporal variability of sediment concentration in rivers, sediment budgets yield average denudation rate over the observational period ranging from years to decades. Cosmogenic nuclides such as 10-Be allow the estimation of basin-wide denudation rates averaged over typical time scales of hundreds to thousand of years, from a single measurement in river sediments. We compare these methods for the case of the Ganga basin that drains the central part of the Himalayan range. By using a distal point of view, i.e. by sampling and evaluating the sediment flux at the outlet of the Ganga in Bangladesh we are able to propose an average denudation rate of the entire, central part of the Himalayan range. This sampling location offers the benefit of integrating the entire basin and its distance from the sediment source makes it also less prone to perturbations in the headwaters. However, the effects of 500 to 1000 km floodplain transfer on the sedimentary signal needs to be correctly evaluated. The gauged sediment flux can mainly be impacted by the sequestration of sediments in the floodplain. For the Ganga basin, sequestration is limited to ca. 10 % of the eroded sediment flux as deduced from geochemical mass balance approaches [1]. On their side

  12. Radon emanations: a tectonic indicator in the Dharamsala area of Himalayan Frontal Zone, Himachal Pradesh

    International Nuclear Information System (INIS)

    Dhar, Sunil


    While throughout the length of Himalayas good exposures of the tertiary and the pre-Tertiary occurs occur, but in the Dharamsala and its adjoining areas of Himalayan Frontal Zone, tertiary and the pre-Tertiary rocks are present within a short aerial distance. This diverse lithology within a short span of distance along with the structural heterogeneity has made this region of Himalayas tectonically significant. This unique tectano-stratigraphic configuration of this area is primarily attributed to the major faults and folds which are either along the Himalayan trend or transverse to it. Interestingly the area is seismically active and falls in the High Seismic Zone-V of seismic atlas of India. It has been observed that regional thrusts systems and lineaments, control seismo-tectonic activity in the region. Contemporary geomorphological re-adjustments in the form of erosion intensity (meandering/drainage pattern or river incision) as a result of active nature of lineaments have been observed. In addition, due to the rampant seismic activity in the region especially in year 2013, the area has witnessed a sequence of landslides. The study further reveals these the signatures of morphological adjustment coincide with zones which have deciphered higher proportions of radon activity. Because radon transport through rocks is largely dependent on the geology of the area, which includes lithology, compaction, porosity structural/tectonic features like thrusts, faults, joints and fractures. Occurrences of landslide the thrust zones, coupled with high emanations of radon (both in soil and water) alludes attention towards dominant role of neo-tectonic activity in the area. (author)

  13. Counter-intuitive influence of Himalayan river morphodynamics on Indus Civilisation urban settlements

    DEFF Research Database (Denmark)

    Singh, Ajit; Thomsen, Kristina Jørkov; Sinha, Rajiv


    Urbanism in the Bronze-age Indus Civilisation (similar to 4.6-3.9 thousand years before the present, ka) has been linked to water resources provided by large Himalayan river systems, although the largest concentrations of urban-scale Indus settlements are located far from extant Himalayan rivers....

  14. Food and nutrition security in the Hindu Kush Himalayan region. (United States)

    Rasul, Golam; Hussain, Abid; Mahapatra, Bidhubhusan; Dangol, Narendra


    The status of food and nutrition security and its underlying factors in the Hindu-Kush Himalayan (HKH) region is investigated. In this region, one third to a half of children (security in the HKH region. To achieve sustainable food and nutrition security in the mountains, this study suggests a multi-sectoral integrated approach with consideration of nutritional aspects in all development processes dealing with economic, social, agricultural and public health issues. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  15. New particle formation infrequently observed in Himalayan foothills – why?

    Directory of Open Access Journals (Sweden)

    K. Neitola


    Full Text Available A fraction of the Himalayan aerosols originate from secondary sources, which are currently poorly quantified. To clarify the climatic importance of regional secondary particle formation in the Himalayas, data from 2005 to 2010 of continuous aerosol measurements at a high-altitude (2180 m Indian Himalayan site, Mukteshwar, were analyzed. For this period, the days were classified, and the particle formation and growth rates were calculated for clear new particle formation (NPF event days. The NPF events showed a pronounced seasonal cycle. The frequency of the events peaked in spring, when the ratio between event and non-event days was 53 %, whereas the events were truly sporadic on any other seasons. The annual mean particle formation and growth rates were 0.40 cm−3 s−1 and 2.43 nm h−1, respectively. The clear annual cycle was found to be mainly controlled by the seasonal evolution of the Planetary Boundary Layer (PBL height together with local meteorological conditions. Spring NPF events were connected with increased PBL height, and therefore characterised as boundary layer events, while the rare events in other seasons represented lower free tropospheric particle formation. This provides insight on the vertical extent of NPF in the atmosphere.

  16. Characterization of a petroleum system in the Himalayan foreland basin

    Energy Technology Data Exchange (ETDEWEB)

    Sorkhabi, R. [Japan National Oil Corp., Tokyo (Japan)


    The Himalayan foreland basin that is a part of the Tethyan tectonic belt is a potential target for hydrocarbon exploration. Petroleum has been yield in the west part of basin (Pakistan), and in the east part (Myanmar). This study takes aim to the central parts of the Himalayan foreland basin (India and Nepal), and identifies sediments Paleocene in age (the Subathu Formation made up of limestone and shale, and Murree Group made up of mudstone and shale) as source rock (TOC content up to 0.5 %), and also identifies permeable Siwalik sandstone (Paleocene-Middle to Neogene) as reservoir rock (porosity ranges from 4 to 27%, and permeability ranges from 0.1 to 10 millidarcy). Source rock had been occurred thermal maturity by burial in late Miocene. The serious problem is the localization of seals and traps. It indicates a potentiality that suitable trap structures had been formed by Main Boundary Thrust (MBT), close to Lesser Himalaya, lifting up and transporting the Proterozoic shale and carbonate rocks atop the Siwalik sandstone. The overthrust activities of source rock (Subathu-Murree Group) atop the Siwalik are important for formation of seals and traps. Actuary, gas and oil seeps are found not in Tarai (plain) but in the vicinity of the MBT. (translated by NEDO)

  17. Glaciers in 21st Century Himalayan Geopolitics (United States)

    Kargel, J. S.; Wessels, R.; Kieffer, H. H.


    Glaciers are ablating rapidly the world over. Nowhere are the rates of retreat and downwasting greater than in the Hindu Kush-Himalaya (HKH) region. It is estimated that over the next century, 40,000 square kilometers of present glacier area in the HKH region will become ice free. Most of this area is in major valleys and the lowest glaciated mountain passes. The existence and characteristics of glaciers have security impacts, and rapidly changing HKH glaciers have broad strategic implications: (1) Glaciers supply much of the fresh water and hydroelectric power in South and Central Asia, and so glaciers are valuable resources. (2) Shared economic interests in water, hydroelectricity, flood hazards, and habitat preservation are a force for common cause and reasoned international relations. (3) Glaciers and their high mountains generally pose a natural barrier tending to isolate people. Historically, they have hindered trade and intercultural exchanges and have protected against aggression. This has further promoted an independent spirit of the region's many ethnic groups. (4) Although glaciers are generally incompatible with human development and habitation, many of the HKH region's glaciers and their mountains have become sanctuaries and transit routes for militants. Siachen Glacier in Kashmir has for 17 years been "the world's highest battlefield," with tens of thousands of troops deployed on both sides of the India/Pakistan line of control. In 1999, that conflict threatened to trigger all-out warfare, and perhaps nuclear warfare. Other recent terrorist and military action has taken place on glaciers in Kyrgyzstan and Tajikistan. As terrorists are forced from easily controlled territories, many may tend to migrate toward the highest ground, where definitive encounters may take place in severe alpine glacial environments. This should be a major concern in Nepali security planning, where an Army offensive is attempting to reign in an increasingly robust and brutal

  18. Widespread albedo decreasing and induced melting of Himalayan snow and ice in the early 21st century. (United States)

    Ming, Jing; Wang, Yaqiang; Du, Zhencai; Zhang, Tong; Guo, Wanqin; Xiao, Cunde; Xu, Xiaobin; Ding, Minghu; Zhang, Dongqi; Yang, Wen


    The widely distributed glaciers in the greater Himalayan region have generally experienced rapid shrinkage since the 1850s. As invaluable sources of water and because of their scarcity, these glaciers are extremely important. Beginning in the twenty-first century, new methods have been applied to measure the mass budget of these glaciers. Investigations have shown that the albedo is an important parameter that affects the melting of Himalayan glaciers. The surface albedo based on the Moderate Resolution Imaging Spectroradiometer (MODIS) data over the Hindu Kush, Karakoram and Himalaya (HKH) glaciers is surveyed in this study for the period 2000-2011. The general albedo trend shows that the glaciers have been darkening since 2000. The most rapid decrease in the surface albedo has occurred in the glacial area above 6000 m, which implies that melting will likely extend to snow accumulation areas. The mass-loss equivalent (MLE) of the HKH glacial area caused by surface shortwave radiation absorption is estimated to be 10.4 Gt yr-1, which may contribute to 1.2% of the global sea level rise on annual average (2003-2009). This work probably presents a first scene depicting the albedo variations over the whole HKH glacial area during the period 2000-2011. Most rapidly decreasing in albedo has been detected in the highest area, which deserves to be especially concerned.

  19. Widespread albedo decreasing and induced melting of Himalayan snow and ice in the early 21st century.

    Directory of Open Access Journals (Sweden)

    Jing Ming

    Full Text Available The widely distributed glaciers in the greater Himalayan region have generally experienced rapid shrinkage since the 1850s. As invaluable sources of water and because of their scarcity, these glaciers are extremely important. Beginning in the twenty-first century, new methods have been applied to measure the mass budget of these glaciers. Investigations have shown that the albedo is an important parameter that affects the melting of Himalayan glaciers.The surface albedo based on the Moderate Resolution Imaging Spectroradiometer (MODIS data over the Hindu Kush, Karakoram and Himalaya (HKH glaciers is surveyed in this study for the period 2000-2011. The general albedo trend shows that the glaciers have been darkening since 2000. The most rapid decrease in the surface albedo has occurred in the glacial area above 6000 m, which implies that melting will likely extend to snow accumulation areas. The mass-loss equivalent (MLE of the HKH glacial area caused by surface shortwave radiation absorption is estimated to be 10.4 Gt yr-1, which may contribute to 1.2% of the global sea level rise on annual average (2003-2009.This work probably presents a first scene depicting the albedo variations over the whole HKH glacial area during the period 2000-2011. Most rapidly decreasing in albedo has been detected in the highest area, which deserves to be especially concerned.

  20. Geoethical Audit of Himalayan Stratigraphy: A Current Insight from India (United States)

    Deep Ahluwalia, Arun


    Focus of this presentation is to illustrate how learned societies and an eminent academy fellow can unfortunately become a pressure group. It is a very unfair and unbecoming even perhaps more than HIMALAYAN HOAX perpetrated by V. J. Gupta two decades back for over 25 years where he fooled journals, funding agencies and about 120 co-authors. Unless corrected, our learned societies and academies may continue degenerate even more. If this can happen today in the biggest democracy of the world with rule of law and freedom of press, what may happen in other set ups across our planet. The ill conceived and highly misleading book HIMALAYAN FOSSIL FRAUD recently published from PSI, Lucknow University, gives some vital but also unfortunately partial, selective and falsified historical and scientific perspectives of the Himalayan Hoax. This book is a standing testimony of a geoethical failure of individuals and of a learned society who published it without checking facts. Lot of personal testimonies and experiences can be added by the presenter. Some INSA Fellows are today like a cooperative society for cover ups and dirty politicking. The nexus within INSA Fellows to mutually protect each other and gratify at public cost is transparent but ignored for fear and power of their huge clout. Mistakes are allowed in science but science ethics does not allow silence once a fraud is known. If one is such a celebrated VIP like Ashok Sahni and D. M. Banerjee highly rewarded and awarded by so many, it becomes mandatory to maintain highest ethical standards and appear to be doing so. Our eminent INSA Fellows and learned society PSI are making themselves look like a mafia. This is neither ethics nor science. It is pure reckless money making and petty politicking by big guns to save their own skin. Very unfortunate indeed for Lucknow University, Lucknow where PSI is based and the retired teachers manning it are staying put for a life time endlessly getting self elected. Ever lowering

  1. Summer Temperature Trend Over the Past Two Millennia Using Air Content in Himalayan Ice

    National Research Council Canada - National Science Library

    Hou, S; Chappellaz, J; Jouzel, J; Chu, P. C; Masson-Delmotte, V; Qin, D; Raynaud, D; Mayewski, P. A; Lipenkov, V. Y; Kang, S


    Two Himalayan ice cores display a factor-two decreasing trend of air content over the past two millennia, in contrast to the relatively stable values in Greenland and Antarctica ice cores over the same period...

  2. The Evolution of Eastern Himalayan Syntaxis of Tibetan Plateau (United States)

    Zhang, S.; Wu, T.; Li, M.; Zhang, Y.; Hua, Y.; Zhang, B.


    Indian plate has been colliding with Eurasian plate since 50Ma years ago, resulting in the Tethys extinction, crust shortening and Tibetan plateau uplift. But it is still a debate how the Tibetan Plateau material escaped. This study tries to invert the distributions of dispersion phase velocity and anisotropy in Eastern Himalayan Syntaxis (EHS) based on the seismic data. We focused on the seven sub-blocks around EHS region. Sub-block "EHS" represents EHS corner with high velocity anomalies, significantly compressed in the axle and strike directions. Sub-blocks "LSD", "QTB" and "SP-GZB" are located at its northern areas with compressions also, and connected with low-velocity anomalies in both crustal and upper mantle rocks. Sub-block "ICB" is located at its southern area with low velocity anomaly, and connected with Tengchong volcano. Sub-blocks "SYDB" and "YZB" are located at its eastern areas with high velocity anomalies in both crustal and upper mantle rocks. Our results demonstrated that significant azimuthal anisotropy of crust (t£30s) and upper mantle (30s£t£60s). Crustal anisotropy indicates the orogenic belt matched well with the direction of fast propagation, and upper mantle anisotropy represents the lattic-preferred orientation (LPO) of mantle minerals (e.g. olivine and basalt), indicating the features of subducting Indian plate. Besides, Red River fault is a dextral strike fault, controlling the crustal and mantle migration. There is a narrow zone to be the channel flow of Tibetan crustal materials escaping toward Yunnan area. The evolution of EHS seems constrained by gravity isostatic mechanism. Keywords: Tibetan Plateau; Eastern Himalayan Syntaxis; Red River fault; crustal flow; surface wave; anisotropy

  3. Geomorphic legacy of medieval Himalayan earthquakes in the Pokhara Valley (United States)

    Schwanghart, Wolfgang; Bernhardt, Anne; Stolle, Amelie; Hoelzmann, Philipp; Adhikari, Basanta R.; Andermann, Christoff; Tofelde, Stefanie; Merchel, Silke; Rugel, Georg; Fort, Monique; Korup, Oliver


    The Himalayas and their foreland belong to the world's most earthquake-prone regions. With millions of people at risk from severe ground shaking and associated damages, reliable data on the spatial and temporal occurrence of past major earthquakes is urgently needed to inform seismic risk analysis. Beyond the instrumental record such information has been largely based on historical accounts and trench studies. Written records provide evidence for damages and fatalities, yet are difficult to interpret when derived from the far-field. Trench studies, in turn, offer information on rupture histories, lengths and displacements along faults but involve high chronological uncertainties and fail to record earthquakes that do not rupture the surface. Thus, additional and independent information is required for developing reliable earthquake histories. Here, we present exceptionally well-dated evidence of catastrophic valley infill in the Pokhara Valley, Nepal. Bayesian calibration of radiocarbon dates from peat beds, plant macrofossils, and humic silts in fine-grained tributary sediments yields a robust age distribution that matches the timing of nearby M>8 earthquakes in ~1100, 1255, and 1344 AD. The upstream dip of tributary valley fills and X-ray fluorescence spectrometry of their provenance rule out local sediment sources. Instead, geomorphic and sedimentary evidence is consistent with catastrophic fluvial aggradation and debris flows that had plugged several tributaries with tens of meters of calcareous sediment from the Annapurna Massif >60 km away. The landscape-changing consequences of past large Himalayan earthquakes have so far been elusive. Catastrophic aggradation in the wake of two historically documented medieval earthquakes and one inferred from trench studies underscores that Himalayan valley fills should be considered as potential archives of past earthquakes. Such valley fills are pervasive in the Lesser Himalaya though high erosion rates reduce

  4. Staphylococcus nepalensis sp. nov., isolated from goats of the Himalayan region. (United States)

    Spergser, Joachim; Wieser, Monika; Täubel, Martin; Rosselló-Mora, Ramon A; Rosengarten, Renate; Busse, Hans-Jürgen


    Four coagulase-negative, novobiocin-resistant cocci, designated CW1(T), PM34, MM3 and RW78, were isolated from the respiratory tract of goats kept in the Himalayan region. The four isolates were assigned to a single species on the basis of almost identical biochemical and physiological traits, protein profiles obtained after SDS-PAGE and identical genomic fingerprints generated after enterobacterial repetitive intergenic consensus (ERIC)-PCR. Strain CW1(T) showed highest 16S rDNA sequence similarities to Staphylococcus cohnii subsp. urealyticus ATCC 49330(T), Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305(T), S. cohnii subsp. cohnii ATCC 29974(T), Staphylococcus arlettae ATCC 43957(T), Staphylococcus gallinarum ATCC 35539(T), Staphylococcus succinus ATCC 700337(T) and Staphylococcus xylosus ATCC 29971(T) (99.0, 98.8, 98.8, 98.4, 98.2, 98.1 and 98.1 %, respectively), indicating its classification within the genus Staphylococcus. The polar lipid composition, fatty acid profiles, quinone systems and diagnostic cell-wall diamino acid were in agreement with the characteristics of the genus Staphylococcus. DNA-DNA hybridization with closely related Staphylococcus species suggested that strain CW1(T) represents an as-yet unrecognized species. Based on these results, a novel species of the genus Staphylococcus is described, Staphylococcus nepalensis sp. nov. The type strain is CW1(T) (=DSM 15150(T)=CCM 7045(T)) and the most dissimilar strain is PM34 (=DSM 15151=CCM 7046).

  5. Detection of flea-borne Rickettsia species in the Western Himalayan region of India

    Directory of Open Access Journals (Sweden)

    R Chahota


    Full Text Available Human infections by various rickettsial species are frequently reported globally. We investigated a flea-borne rickettsial outbreak infecting 300 people in Western Himalayan region of India. Arthropod vectors (ticks and fleas and animal and human blood samples from affected households were analysed by gltA and ompB genes based polymerase chain reaction (PCR. Rat flea (Ceratophyllus fasciatus samples were found harbouring a Rickettsia sp. Phylogenetic analysis based on gltA gene using PHYLIP revealed that the detected Rickettsia sp. has 100% identity with SE313 and RF2125 strains of Rickettsia sp. of flea origin from Egypt and Thai-Myanmar border, respectively and cf1 and 5 strains from fleas and lice from the USA. But, the nucleotide sequence of genetically variable gene ompB of R14 strain was found closely related to cf9 strain, reported from Ctenocephalides felis fleas. These results highlight the public health importance of such newly discovered or less recognised Rickettsia species/strains, harboured by arthropod vectors like fleas.

  6. Molecular phylogenetic analysis of fleshy pored mushrooms: Neoboletus luridiformis and Hortiboletus rubellus from western Himalayan range of Pakistan

    International Nuclear Information System (INIS)

    Sarwar, S.; Khalid, N.; Dentinger, B.M.


    Fleshy pored mushrooms is the name given to boletes due to their porous hymenium and fleshy nature. These are ectomycorrhizal basidiomycetes found in all continents except Antarctica. These mushrooms are important economically due to their edibility and medicinal value. This research work highlights the diversity of boletes in Pakistan and their correct identification by using molecular phylogenetic techniques. Western Himalayan range (WHR) of Pakistan is considered as diversity rich area. During present investigation regarding diversity of boletes in these areas, two bolete taxa viz. Hortiboletus rubellus and Neoboletus luridiformis were found under conifers. These mushrooms were collected and analyzed morphologically as well as phylogenetically by using Internal Transcribed Spacer (ITS) region of nrDNA sequences, and compared with their allies. All description and comparison with related taxa is provided in detail. These boletes are first time analyzed using molecular method from Pakistan. (author)

  7. Himalayan tectonic evolution and uranium ore formation, south of Songliao basin

    International Nuclear Information System (INIS)

    Tian Wanwen; Wang Liming; Tian Li


    Based on the analysis of stress field and geomorphic environment of Songliao Basin during Himalayan Movement, it is presented that Himalayan Movement supplied favorite structural and geomorphic conditions with Eocene and Pliocene being metallogenic epoch for sandstone-type uranium in Songliao Basin. Degradation inliers at the southern margin of Songliao Basin, where structure and mineralization developed well, are the target area for in-situ sandstone type uranium. (authors)

  8. Timing and mechanism of the rise of the Shillong Plateau in the Himalayan foreland.


    Govin, Gwladys; Najman, Yanina Manya Rachel; Copley, Alex; Millar, Ian; Van der Beek, Peter; Huyghe, Pascale; Grujic, Djordje; Davenport, Jesse


    The Shillong Plateau (northeastern India) constitutes the only significant topography in the Himalayan foreland. Knowledge of its surface uplift history is key to understanding topographic development and unraveling tectonic–climate–topographic coupling in the eastern Himalaya. We use the sedimentary record of the Himalayan foreland basin north of the Shillong Plateau to show that the paleo-Brahmaputra river was redirected north and west by the rising plateau at 5.2–4.9 Ma. We suggest that on...

  9. Temporal and spatial changes in Western Himalayan firn line altitudes from 1998 to 2009 (United States)

    Guo, Zhongming; Wang, Ninglian; Kehrwald, Natalie M.; Mao, Ruijuan; Wu, Hongbo; Wu, Yuwei; Jiang, Xi


    Understanding changes in glacier mass balance is important because it is indicative of changes in climate and the hydrologic cycle. The latter also has particular influence on people living near glaciers and/or glacier-fed rivers. The Western Himalayas remain one of the regions where recent changes in glacier mass balance are not well-known. The temporal and spatial changes in firn line altitudes are an indicator of equilibrium line altitudes and thus reflect changes in glacier mass balance. Here, we use Himalayan Landsat TM/ETM + data in July and August (the late summer melt season) to quantify changes in firn line altitudes from 1998 to 2009. We produced reflectance maps through radiometric calibration and atmospheric correction and use topographic correction to remove or reduce terrain or shadow effects. The real ‘surface albedo’ is obtained by narrowband-to-broadband (NTB) albedo conversion from the combined solar radiation. The firn line altitude was then extracted by combining the ‘surface albedo’ with pre-registered digital elevation model. The individual firn line altitude varies by region. The Western Himalayas display the largest range of firn line variability, where the firn line altitudes vary from 4840 m a.s.l. to 5770 m a.s.l. The individual glacier mean firn line altitude from 1998 to 2009 rose from 5072 ± 77 m a.s.l. to 5640 ± 74 m a.s.l. in the Western Himalayas. The mean firn line altitude increased from 1998 to 2009. The lowest mean recorded firn line altitude recorded was 5237 ± 166 m a.s.l. in 1998, whereas the highest was 5397 ± 135 m a.s.l. in 2000. We also observed a difference between the changes in fine line altitudes of northern and southern slopes of the western Himalayans, as the northern slope glaciers display a greater increase in firn line altitudes than the southern slope glaciers. In the southern slope, changes in firn line altitudes correlate with NCDC-NOAA temperature and precipitation data. This sustained increase of

  10. Modeling hydrology, groundwater recharge and non-point nitrate loadings in the Himalayan Upper Yamuna basin. (United States)

    Narula, Kapil K; Gosain, A K


    The mountainous Himalayan watersheds are important hydrologic systems responsible for much of the water supply in the Indian sub-continent. These watersheds are increasingly facing anthropogenic and climate-related pressures that impact spatial and temporal distribution of water availability. This study evaluates temporal and spatial distribution of water availability including groundwater recharge and quality (non-point nitrate loadings) for a Himalayan watershed, namely, the Upper Yamuna watershed (part of the Ganga River basin). The watershed has an area of 11,600 km(2) with elevation ranging from 6300 to 600 m above mean sea level. Soil and Water Assessment Tool (SWAT), a physically-based, time-continuous model, has been used to simulate the land phase of the hydrological cycle, to obtain streamflows, groundwater recharge, and nitrate (NO3) load distributions in various components of runoff. The hydrological SWAT model is integrated with the MODular finite difference groundwater FLOW model (MODFLOW), and Modular 3-Dimensional Multi-Species Transport model (MT3DMS), to obtain groundwater flow and NO3 transport. Validation of various modules of this integrated model has been done for sub-basins of the Upper Yamuna watershed. Results on surface runoff and groundwater levels obtained as outputs from simulation show a good comparison with the observed streamflows and groundwater levels (Nash-Sutcliffe and R(2) correlations greater than +0.7). Nitrate loading obtained after nitrification, denitrification, and NO3 removal from unsaturated and shallow aquifer zones is combined with groundwater recharge. Results for nitrate modeling in groundwater aquifers are compared with observed NO3 concentration and are found to be in good agreement. The study further evaluates the sensitivity of water availability to climate change. Simulations have been made with the weather inputs of climate change scenarios of A2, B2, and A1B for end of the century. Water yield estimates under

  11. Modeling hydrology, groundwater recharge and non-point nitrate loadings in the Himalayan Upper Yamuna basin

    Energy Technology Data Exchange (ETDEWEB)

    Narula, Kapil K., E-mail: [Columbia Water Center (India Office), Columbia University, New Delhi 110 016 (India); Gosain, A.K. [Department of Civil Engineering, Indian Institute of Technology (IIT) Delhi, Hauz Khas, New Delhi 110 016 (India)


    The mountainous Himalayan watersheds are important hydrologic systems responsible for much of the water supply in the Indian sub-continent. These watersheds are increasingly facing anthropogenic and climate-related pressures that impact spatial and temporal distribution of water availability. This study evaluates temporal and spatial distribution of water availability including groundwater recharge and quality (non-point nitrate loadings) for a Himalayan watershed, namely, the Upper Yamuna watershed (part of the Ganga River basin). The watershed has an area of 11 600 km{sup 2} with elevation ranging from 6300 to 600 m above mean sea level. Soil and Water Assessment Tool (SWAT), a physically-based, time-continuous model, has been used to simulate the land phase of the hydrological cycle, to obtain streamflows, groundwater recharge, and nitrate (NO{sub 3}) load distributions in various components of runoff. The hydrological SWAT model is integrated with the MODular finite difference groundwater FLOW model (MODFLOW), and Modular 3-Dimensional Multi-Species Transport model (MT3DMS), to obtain groundwater flow and NO{sub 3} transport. Validation of various modules of this integrated model has been done for sub-basins of the Upper Yamuna watershed. Results on surface runoff and groundwater levels obtained as outputs from simulation show a good comparison with the observed streamflows and groundwater levels (Nash–Sutcliffe and R{sup 2} correlations greater than + 0.7). Nitrate loading obtained after nitrification, denitrification, and NO{sub 3} removal from unsaturated and shallow aquifer zones is combined with groundwater recharge. Results for nitrate modeling in groundwater aquifers are compared with observed NO{sub 3} concentration and are found to be in good agreement. The study further evaluates the sensitivity of water availability to climate change. Simulations have been made with the weather inputs of climate change scenarios of A2, B2, and A1B for end of the

  12. The Caucasian-Arabian segment of the Alpine-Himalayan collisional belt: Geology, volcanism and neotectonics

    Directory of Open Access Journals (Sweden)

    E. Sharkov


    Full Text Available The Caucasian-Arabian belt is part of the huge late Cenozoic Alpine-Himalayan orogenic belt formed by collision of continental plates. The belt consists of two domains: the Caucasian-Arabian Syntaxis (CAS in the south and the EW-striking Greater Caucasus in the north. The CAS marks a zone of the indentation of the Arabian plate into the southern East European Craton. The Greater Caucasus Range is located in the south of the Eurasian plate; it was tectonically uplifted along the Main Caucasian Fault (MCF, which is, in turn, a part of a megafault extended over a great distance from the Kopetdag Mts. to the Tornquist-Teisseyre Trans-European Suture Zone. The Caucasus Mts. are bounded by the Black Sea from the west and by the Caspian Sea from the east. The SN-striking CAS is characterized by a large geophysical isostatic anomaly suggesting presence of mantle plume head. A 500 km long belt of late Cenozoic volcanism in the CAS extends from the eastern Anatolia to the Lesser and Greater Caucasus ranges. This belt hosts two different types of volcanic rocks: (1 plume-type intraplate basaltic plateaus and (2 suprasubduction-type calc-alkaline and shoshonite-latite volcanic rocks. As the CAS lacks signatures of subduction zones and is characterized by relatively shallow earthquakes (50–60 km, we suggest that the “suprasubduction-type” magmas were derived by interaction between mantle plume head and crustal material. Those hybrid melts were originated under conditions of collision-related deformation. During the late Cenozoic, the width of the CAS reduced to ca. 400 km due to tectonic “diffluence” of crustal material provided by the continuing Arabia-Eurasia collision.

  13. Earthquake swarms near eastern Himalayan Syntaxis along Jiali Fault in Tibet: A seismotectonic appraisal

    Directory of Open Access Journals (Sweden)

    Basab Mukhopadhyay


    Full Text Available The seismotectonic characteristics of ten repeated earthquake swarm sequence within a seismic cluster along Jiali Fault in eastern Himalayan Syntaxis (EHS have been analysed. The swarms are spatially disposed in and around Yigong Lake (a natural lake formed by blocking of Yigong River by landslide and are characterized by low magnitude, crustal events with low to moderate b values. Ms : mb discriminant functions though indicate anomalous nature of the earthquakes within swarm but are considered as natural events that occurred under condition of high apparent stress and stress gradients. Composite fault plane solutions of selected swarms indicate strike–slip sense of shear on fault planes; solution parameters show low plunging compression and tensional axes along NW–SE and NE–SW respectively with causative fault plane oriented ENE–WSW, dipping steeply towards south or north. The fault plane is in excellent agreement with the disposition and tectonic movement registered by right lateral Jiali Fault. The process of pore pressure perturbation and resultant ‘r–t plot’ with modelled diffusivity (D = 0.12 m2/s relates the diffusion of pore pressure to seismic sequence in a fractured poro-elastic fluid saturated medium at average crustal depth of 15–20 km. The low diffusivity depicts a highly fractured interconnected medium that is generated due to high stress activity near the eastern syntaxial bent of Himalaya. It is proposed that hydro fracturing with respect to periodic pore pressure variations is responsible for generation of swarms in the region. The fluid pressure generated due to shearing and infiltrations of surface water within dilated seismogenic fault (Jiali Fault are causative factors.

  14. Understanding Himalayan extreme rainfall to inform disaster governance (United States)

    Ek, M. B.; Kumar, A.


    The hydrological aspects of the Himalayan flooding events were investigated with the coupled atmospheric and Hydrological (WRF-LIS) modeling tool. The Convective storms occurring at the steep edge of broad high topography, such as the Rocky Mountains and Himalayas, are notorious for producing surprising and lethal flash floods. We investigated two recent Himalayan flood events (a) 2010 Ladakh flood: A flash flood and landslide in the Leh region of the Indus Valley in the Indian state of Jammu and Kashmir on 5-6 August 2010 resulted in hundreds of deaths and great property damage. (b) 2013 Uttrakhand flood: Over a three-day period in June 2013, approximately 500-1000 mm of rain fell over Uttarakhand and its river valleys as well as neighboring Nepal. The extensive precipitation and runoff led to devastating floods and landslides throughout the region and resulted in much destruction and loss of life (over 4,000 villages were affected, and the death toll exceeded 5,000). The Uttarakhand flood had characteristics in common with major 2013 floods in the Rocky Mountains in Colorado and Alberta. Our study examines the land-atmosphere interactions & cloud structure and dynamics of these flooding events in more detail, identifying the synoptic, mesoscale, convective, orographic, and land-surface components of the storm. We include satellite observations, ground-based radar imagery, and convection-permitting model simulations down to 1 km grid resolution to show the three-dimensional character of the precipitating cloud systems in more detail than previous studies. Our Land Information System (LIS) calculations suggest that soil moisture preconditioning by prior storms in the area in a vulnerable watershed is a hydrologic ingredient that should be taken into account along with the meteorological ingredients. In this regard, our results will be seen to reinforce the position taken by Doswell et al. (1996) that local forecasting of flood situations is ideally based on

  15. Black carbon and the Himalayan cryosphere: A review (United States)

    Gertler, Charles G.; Puppala, Siva Praveen; Panday, Arnico; Stumm, Dorothea; Shea, Joseph


    The Himalayan cryosphere borders global hotspots for emissions of black carbon (BC), a carbonaceous aerosol with a short atmospheric lifespan and potentially significant impacts on glaciers and snow cover. BC in the atmosphere absorbs radiation efficiently, leading to localized positive climate forcing. BC may also be deposited onto snow and ice surfaces, thereby changing their albedo. This review presents up-to-date observational data of BC in the atmosphere and in snow and ice, as well as its effects on the cryosphere in the Hindu-Kush-Himalayan (HKH) region along the northern edge of South Asia. Significant spatial variation exists in the measured concentrations of BC in the atmosphere and cryosphere. A strong seasonal pattern exists, with highest concentrations in the pre-monsoon and lowest during the monsoon. Existing observations show bias towards certain areas, with a noticeable lack of measurements on the south side of the Himalaya. Significant uncertainty persists in the emissions estimates of BC in the HKH region, with a standard deviation of regional emissions from various emission inventories of 0.5150 × 10-9 kg m-2 s-1, or 47.1% of the mean (1.0931 × 10-9 kg m-2 s-1). This and other uncertainties, including poor model resolution, imprecision in deposition modeling, and incongruities among measurement types, propagate through simulations of BC concentration in atmosphere and cryosphere. Modeled atmospheric concentrations can differ from observations by as much as a factor of three with no systematic bias, and modeled concentrations in snow and ice can differ from observations by a factor of 60 in certain regions. In the Himalaya, estimates of albedo change due to BC range from about 2 to 10%, estimates of direct radiative forcing due to BC in the atmosphere from (-2)-7 W m-2, and surface forcing estimates from 0 to 28 W m-2, though every forcing estimate uses its own definition, with varying degrees of complexity and numbers of feedbacks. We find the

  16. Deduced amino acid sequence of the small hydrophobic protein of US avian pneumovirus has greater identity with that of human metapneumovirus than those of non-US avian pneumoviruses. (United States)

    Yunus, Abdul S; Govindarajan, Dhanasekaran; Huang, Zhuhui; Samal, Siba K


    We report here the nucleotide and deduced amino acid (aa) sequences of the small hydrophobic (SH) gene of the avian pneumovirus strain Colorado (APV/CO). The SH gene of APV/CO is 628 nucleotides in length from gene-start to gene-end. The longest ORF of the SH gene encoded a protein of 177 aas in length. Comparison of the deduced aa sequence of the SH protein of APV/CO with the corresponding published sequences of other members of genera metapneumovirus showed 28% identity with the newly discovered human metapneumovirus (hMPV), but no discernable identity with the APV subgroup A or B. Collectively, this data supports the hypothesis that: (i) APV/CO is distinct from European APV subgroups and belongs to the novel subgroup APV/C (APV/US); (ii) APV/CO is more closely related to hMPV, a mammalian metapneumovirus, than to either APV subgroup A or B. The SH gene of APV/CO was cloned using a genomic walk strategy which initiated cDNA synthesis from genomic RNA that traversed the genes in the order 3'-M-F-M2-SH-G-5', thus confirming that gene-order of APV/CO conforms in the genus Metapneumovirus. We also provide the sequences of transcription-signals and the M-F, F-M2, M2-SH and SH-G intergenic regions of APV/CO.

  17. Greater autonomy at work

    NARCIS (Netherlands)

    Houtman, I.L.D.


    In the past 10 years, workers in the Netherlands increasingly report more decision-making power in their work. This is important for an economy in recession and where workers face greater work demands. It makes work more interesting, creates a healthier work environment, and provides opportunities

  18. Herbarium specimens show contrasting phenological responses to Himalayan climate. (United States)

    Hart, Robbie; Salick, Jan; Ranjitkar, Sailesh; Xu, Jianchu


    Responses by flowering plants to climate change are complex and only beginning to be understood. Through analyses of 10,295 herbarium specimens of Himalayan Rhododendron collected by plant hunters and botanists since 1884, we were able to separate these responses into significant components. We found a lack of directional change in mean flowering time over the past 45 y of rapid warming. However, over the full 125 y of collections, mean flowering time shows a significant response to year-to-year changes in temperature, and this response varies with season of warming. Mean flowering advances with annual warming (2.27 d earlier per 1 °C warming), and also is delayed with fall warming (2.54 d later per 1 °C warming). Annual warming may advance flowering through positive effects on overwintering bud formation, whereas fall warming may delay flowering through an impact on chilling requirements. The lack of a directional response suggests that contrasting phenological responses to temperature changes may obscure temperature sensitivity in plants. By drawing on large collections from multiple herbaria, made over more than a century, we show how these data may inform studies even of remote localities, and we highlight the increasing value of these and other natural history collections in understanding long-term change.

  19. The Invisible Path of Karma in a Himalayan Purificatory Rite

    Directory of Open Access Journals (Sweden)

    Arik Moran


    Full Text Available Indic rites of purification aim to negate the law of karma by removing the residues of malignant past actions from their patrons. This principle is exemplified in the Kahika Mela, a rarely studied religious festival of the West Himalayan highlands (Himachal Pradesh, India, wherein a ritual specialist assumes karmic residues from large publics and then sacrificed to their presiding deity. British officials who had ‘discovered’ this purificatory rite at the turn of the twentieth century interpreted it as a variant of the universal ‘scapegoat’ rituals that were then being popularized by James Frazer and found it loosely connected to ancient Tantric practises. The However, observing a recent performance of the ritual significantly complicated this view. This paper proposes a novel reading of the Kahika Mela through the prism of karmic transference. Tracing the path of karmas from participants to ritual specialist and beyond, it delineates the logic behind the rite, revealing that the culminating act of human sacrifice is, in fact, secondary to the mysterious force that impels its acceptance.

  20. Assessment of the performance of CORDEX-SA experiments in simulating seasonal mean temperature over the Himalayan region for the present climate: Part I (United States)

    Nengker, T.; Choudhary, A.; Dimri, A. P.


    The ability of an ensemble of five regional climate models (hereafter RCMs) under Coordinated Regional Climate Downscaling Experiments-South Asia (hereafter, CORDEX-SA) in simulating the key features of present day near surface mean air temperature (Tmean) climatology (1970-2005) over the Himalayan region is studied. The purpose of this paper is to understand the consistency in the performance of models across the ensemble, space and seasons. For this a number of statistical measures like trend, correlation, variance, probability distribution function etc. are applied to evaluate the performance of models against observation and simultaneously the underlying uncertainties between them for four different seasons. The most evident finding from the study is the presence of a large cold bias (-6 to -8 °C) which is systematically seen across all the models and across space and time over the Himalayan region. However, these RCMs with its fine resolution perform extremely well in capturing the spatial distribution of the temperature features as indicated by a consistently high spatial correlation (greater than 0.9) with the observation in all seasons. In spite of underestimation in simulated temperature and general intensification of cold bias with increasing elevation the models show a greater rate of warming than the observation throughout entire altitudinal stretch of study region. During winter, the simulated rate of warming gets even higher at high altitudes. Moreover, a seasonal response of model performance and its spatial variability to elevation is found.

  1. Recent shifts in Himalayan vegetation activity trends in response to climatic change and environmental drivers (United States)

    Mishra, N. B.; Mainali, K. P.


    Climatic changes along with anthropogenic disturbances are causing dramatic ecological impacts in mid to high latitude mountain vegetation including in the Himalayas which are ecologically sensitive environments. Given the challenges associated with in situ vegetation monitoring in the Himalayas, remote sensing based quantification of vegetation dynamics can provide essential ecological information on changes in vegetation activity that may consist of alternative sequence of greening and/or browning periods. This study utilized a trend break analysis procedure for detection of monotonic as well as abrupt (either interruption or reversal) trend changes in smoothed normalized difference vegetation index satellite time-series data over the Himalayas. Overall, trend breaks in vegetation greenness showed high spatio-temporal variability in distribution considering elevation, ecoregion and land cover/use stratifications. Interrupted greening was spatially most dominant in all Himalayan ecoregions followed by abrupt browning. Areas showing trend reversal and monotonic trends appeared minority. Trend type distribution was strongly dependent on elevation as majority of greening (with or without interruption) occurred at lower elevation areas at higher elevation were dominantly. Ecoregion based stratification of trend types highlighted some exception to this elevational dependence as high altitude ecoregions of western Himalayas showed significantly less browning compared to the ecoregions in eastern Himalaya. Land cover/use based analysis of trend distribution showed that interrupted greening was most dominant in closed needleleafed forest following by rainfed cropland and mosaic croplands while interrupted browning most dominant in closed to open herbaceous vegetation found at higher elevation areas followed by closed needleleafed forest and closed to open broad leafed evergreen forests. Spatial analysis of trend break timing showed that for majority of areas experiencing

  2. Greater-confinement disposal

    International Nuclear Information System (INIS)

    Trevorrow, L.E.; Schubert, J.P.


    Greater-confinement disposal (GCD) is a general term for low-level waste (LLW) disposal technologies that employ natural and/or engineered barriers and provide a degree of confinement greater than that of shallow-land burial (SLB) but possibly less than that of a geologic repository. Thus GCD is associated with lower risk/hazard ratios than SLB. Although any number of disposal technologies might satisfy the definition of GCD, eight have been selected for consideration in this discussion. These technologies include: (1) earth-covered tumuli, (2) concrete structures, both above and below grade, (3) deep trenches, (4) augered shafts, (5) rock cavities, (6) abandoned mines, (7) high-integrity containers, and (8) hydrofracture. Each of these technologies employ several operations that are mature,however, some are at more advanced stages of development and demonstration than others. Each is defined and further described by information on design, advantages and disadvantages, special equipment requirements, and characteristic operations such as construction, waste emplacement, and closure

  3. Counter-intuitive influence of Himalayan river morphodynamics on Indus Civilisation urban settlements

    DEFF Research Database (Denmark)

    Singh, Ajit; Thomsen, Kristina Jørkov; Sinha, Rajiv


    Urbanism in the Bronze-age Indus Civilisation (similar to 4.6-3.9 thousand years before the present, ka) has been linked to water resources provided by large Himalayan river systems, although the largest concentrations of urban-scale Indus settlements are located far from extant Himalayan rivers....... Here we analyse the sedimentary architecture, chronology and provenance of a major palaeochannel associated with many of these settlements. We show that the palaeochannel is a former course of the Sutlej River, the third largest of the present-day Himalayan rivers. Using optically stimulated...... luminescence dating of sand grains, we demonstrate that flow of the Sutlej in this course terminated considerably earlier than Indus occupation, with diversion to its present course complete shortly after similar to 8 ka. Indus urban settlements thus developed along an abandoned river valley rather than...

  4. Les premières années de The Himalayan Journal (1929-1940

    Directory of Open Access Journals (Sweden)

    Michel Raspaud


    Full Text Available IntroductionLa création de The Himalayan Club, sur le territoire de l’Empire des Indes à la fin de l’année 1927, s’accompagne presque aussitôt de la publication de The Himalayan Journal, en février 1929, soit mois de dix-huit mois après la création officielle de l’institution. L’objet du présent texte concerne donc la vie de The Himalayan Club lors de ses premières années d’existence, depuis la date de sa création jusqu’au début de la seconde guerre mondiale. Cependant, l’intérêt se focaliser...

  5. Enhancing Earth Observation Capacity in the Himalayan Region (United States)

    Shrestha, B. R.


    Earth observations bear special significance in the Himalayan Region owing to the fact that routine data collections are often hampered by highly inaccessible terrain and harsh climatic conditions. The ongoing rapid environmental changes have further emphasized its relevance and use for informed decision-making. The International Center for Integrated Mountain Development (ICIMOD), with a regional mandate is promoting the use of earth observations in line with the GEOSS societal benefit areas. ICIMOD has a proven track record to utilize earth observations notably in the areas of understanding glaciers and snow dynamics, disaster risk preparedness and emergency response, carbon estimation for community forestry user groups, land cover change assessment, agriculture monitoring and food security analysis among others. This paper presents the challenges and lessons learned as a part of capacity building of ICIMOD to utilize earth observations with the primary objectives to empower its member countries and foster regional cooperation. As a part of capacity building, ICIMOD continues to make its efforts to augment as a regional resource center on earth observation and geospatial applications for sustainable mountain development. Capacity building possesses multitude of challenges in the region: the complex geo-political reality with differentiated capacities of member states, poorer institutional and technical infrastructure; addressing the needs for multiple user and target groups; integration with different thematic disciplines; and high resources intensity and sustainability. A capacity building framework was developed based on detailed needs assessment with a regional approach and strategy to enhance capability of ICIMOD and its network of national partners. A specialized one-week training course and curriculum have been designed for different thematic areas to impart knowledge and skills that include development practitioners, professionals, researchers and

  6. Microseismicity, tectonics and seismic potential in the Western Himalayan segment, NW Himalaya, India (United States)

    Parija, Mahesh Prasad; Kumar, Sushil; Tiwari, V. M.; Rao, N. Purnachandra; Kumar, Narendra; Biswal, Shubhasmita; Singh, Ishwar


    The tectonics and seismic potential of the western Himalayan segment (30-33°N; 76-80°E) of the NW Himalayan (India) region have been determined in this study. 423 earthquakes were located in the NW Himalaya between 2004 and 2013 using more than 4495 P and 4453 S differential travel times to determine the moment tensors for 8 (Mw ≥ 4.0) of these earthquakes using their broadband regional waveforms. The geometry of the Main Himalayan Thrust (MHT) plane which varies along the strike of the Himalaya in flat and ramp segments with a dip ranging between ∼2.5 to ∼4° to ∼19° below the Himalayan Frontal Thrust (HFT) in the south to the South Tibetan Detachment (STD) in the north has also been deduced in this study. Two crustal ramps were reported in this study with a depth variance below the Main Central Thrust (MCT) and to the South Tibetan Detachment (STD) between 12 to 22 km and 28 to 40 km depth respectively. The estimated earthquake potential prevailing in the western Himalayan seismic gap lying between the epicentral zone of the 1905 Kangra earthquake and the 1975 Kinnaur earthquake reveals that the total amount of energy released since the last great event is only a fraction (3-5%) of the accommodated energy i.e.1.1E+28 dyne-cm/yr. This suggests that if an earthquake hits this NW Himalayan segment in the future, its magnitude might be around Mw ≥ 8.0.

  7. Phytochemical and antimicrobial activities of Himalayan Cordyceps sinensis (Berk.) Sacc. (United States)

    Mamta; Mehrotra, Shubhi; Amitabh; Kirar, Vandana; Vats, Praveen; Nandi, Shoma Paul; Negi, P S; Misra, Kshipra


    This study evaluated the phytochemical and antimicrobial activities and also quantified bioactive nucleoside using high performance thin layer chromatography (HPTLC) of five extracts of Indian Himalayan Cordyceps sinensis prepared with different solvents employing accelerated solvent extraction (ASE) technique. The phytochemical potential of these extracts was quantified in terms of total phenolic and total flavonoid content while antioxidant activities were determined by 1,1-diphenyl-2-pycryl-hydrazyl (DPPH) and 2,2 -azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) and ferric-reducing antioxidant power (FRAP) assays. Total reducing power (TRP) was determined by converting iron (III) into iron (II) reduction assay. CS(50%Alc) (15.1 ± 0.67mg/g of dry extract) and CS(100%Alc) (19.3 ± 0.33 mg/g of dry extract) showed highest phenolic and flavonoid content, respectively while CS(Aq) extract showed maximum antioxidant activity and the highest concentration of the three nucleosides (adenine 12.8 ± 0.49 mg/g, adenosine 0.36 ± 0.28 mg/g and uracil 0.14 ± 0.36 mg/g of dry extract) determined by HPTLC. The evaluation of extracts for antimicrobial activity against gram-negative and gram-positive bacterial strains showed CS(25%Alc), CS(75%Alc) and CS(100%Alc) extract to be more effective against E. coli, P. aerugenosa and B. subtilis giving 9, 7 and 6.5 mm of zone of inhibition (ZOI) in 93.75, 93.75 and 45 μg concentration, respectively, whereas CS(Aq) extract showed minimal inhibition against these.

  8. CMIP5 based downscaled temperature over Western Himalayan region (United States)

    Dutta, M.; Das, L.; Meher, J. K.


    Limited numbers of reliable temperature data is available for assessing warming over the Western Himalayan Region (WHR) of India. India meteorological Department provided many stations having more than 30% missing values. Stations having values, were replaced using the Multiple Imputation Chained Equation (MICE) technique. Finally 16 stations having continuous records during 1969-2009 were considered as the "reference stations" for assessing the trends in addition to evaluate the Coupled Model Intercomparison, phase 5 (CMIP5) Global Circulation Model(GCMs). Station data indicates higher and rapid (1.41oC) winter warming than the other seasons and least warming was observed in the post monsoon (0.31oC) season. Mean annual warming is 0.84 oC during 1969-2009 indicating the warming over the WHR is more than double the global warming (0.85oC during 1880-2012). The performance of 34 CMIP5 models was evaluated through three different approaches namely comparison of: i) mean seasonal cycle ii) temporal trends and iii) spatial correlation and a rank was assigned to each GCM. How the better performing GCMs able to reproduce the observed spatial details were verified the ERA-interim reanalysis data. Finally station level future downscaled winter temperature has constructed using Empirical Statistical Downscaling (ESD) technique where 2 meter air temperature (T2m) is considered as predictor and station temperature as predictant. Future range of downscaled temperature change for the stations Dheradun, Manali and Gulmarg are 1.3-6.1OC, 1.1-5.8OC and 0.5-5.8OC respectively at the end of 21st century.

  9. Himalayan porter's specialization: metabolic power, economy, efficiency and skill. (United States)

    Minetti, Alberto E; Formenti, Federico; Ardigò, Luca P


    Carrying heavy loads in the Himalayan region is a real challenge. Porters face extreme ranges in terrain condition, path steepness, altitude hypoxia and climate for 6-8h a day, many months a year, since they were boys. It has been previously shown that, when carrying loads on level terrain, porters' metabolic economy is higher than in Caucasians but the reasons are still unknown. We monitored Nepalese porters both during 90 km trekking in Khumbu Valley and at two different altitudes (3490 and 5050 m above sea-level), where they were compared to Caucasian mountaineers during (22%) gradient walking. Both subject groups carried a load of up to 90% body mass. The remarkably higher performance of porters during uphill locomotion (+60% in speed, +39% mechanical power) is only partly explained by the lower cost of loaded walking (-20%), being also the result of a better cardio-circulatory adaptation to altitude, which generates a higher mass-specific metabolic power (+30%). Consequently, Nepalese porters show higher efficiency, both during uphill and downhill loaded walking. Their higher economy on steep paths cannot be ascribed to a better exchange between potential and kinetic energy, as in our experiments the body centre of mass travelled monotonically uphill (or downhill). A different oscillation pattern of the loaded head-trunk segment, together with the analysis of the different components of the mechanical work during load carrying, suggests that achieved motor skills in balancing the loaded body segment above the hip could play a role in determining the better economy of porters.

  10. More features, greater connectivity. (United States)

    Hunt, Sarah


    Changes in our political infrastructure, the continuing frailties of our economy, and a stark growth in population, have greatly impacted upon the perceived stability of the NHS. Healthcare teams have had to adapt to these changes, and so too have the technologies upon which they rely to deliver first-class patient care. Here Sarah Hunt, marketing co-ordinator at Aid Call, assesses how the changing healthcare environment has affected one of its fundamental technologies - the nurse call system, argues the case for wireless such systems in terms of what the company claims is greater adaptability to changing needs, and considers the ever-wider range of features and functions available from today's nurse call equipment, particularly via connectivity with both mobile devices, and ancillaries ranging from enuresis sensors to staff attack alert 'badges'.

  11. Greater oil investment opportunities

    International Nuclear Information System (INIS)

    Arenas, Ismael Enrique


    Geologically speaking, Colombia is a very attractive country for the world oil community. According to this philosophy new and important steps are being taken to reinforce the oil sector: Expansion of the exploratory frontier by including a larger number of sedimentary areas, and the adoption of innovative contracting instruments. Colombia has to offer, Greater economic incentives for the exploration of new areas to expand the exploratory frontier, stimulation of exploration in areas with prospectivity for small fields. Companies may offer Ecopetrol a participation in production over and above royalties, without it's participating in the investments and costs of these fields, more favorable conditions for natural gas seeking projects, in comparison with those governing the terms for oil

  12. Characterizing anthropogenic impacts on two mid-altitude Himalayan lakes in the Western Himalaya: A look at shifts in water chemistry and phytoplankton communities (United States)

    Marcus, T. S.; Tiwari, S.; Bhatt, J. P.; Pandit, M. K.; Varner, R. K.


    The Himalayan region is globally regarded for its natural mountain ecosystems but increased agricultural expansion and urbanization have resulted in greater nutrient loading in Himalayan water bodies causing widespread fish kills and shrinking lakes. Despite concerns for environmental degradation, lack of empirical investigations and quantitative data are major constraints in understanding these events. To determine the impact of human development on Himalayan lakes, we investigated Rewalsar, a spring-fed lake and Kareri a glacial-fed lake in the state of Himachal Pradesh. Rewalsar is surrounded by a rapidly growing town and agricultural fields while Kareri Lake is situated in a relatively remote area. Measurements were made in the spring periods of 2013 and 2016. Water samples were collected 1m below the lake surface and analyzed for major ions, nitrates, phosphates, DO, pH, temperature, turbidity, and TDS. Alagal samples were collected from each lake and species counted and identified using standard taxonomic literature. Statistical analysis was performed using PC-ORD. Results showed a significant change in water chemistry and phytoplankton communities with Rewalsar Lake showing an increase in pollutant tolerant algae over the sample period. Principle component analysis showed that the 2016 data from Kareri Lake had phytoplankton communities and chemical data resembling the urban lake of Rewalsar. Kareri Lake had the highest DO (10 mg/ml) while Rewalsar showed the lowest DO at 3 mg/ml in 2016, a decrease from 8 mg/ml in 2013. With a total oxygen demand (TOD) of 6.5 mg/ml in Rewalsar, the decreasing DO value is likely the cause of the increasing annual fish kills as reported by local governments. TDS measurements were highest in Rewalsar Lake compared to the TDS levels of Kareri, indicating a higher amount of surface runoff from the surrounding area in Rewalsar. Nitrate and phosphate levels also increased over this time period. Our multi-year investigation also

  13. Nutritional profile of phytococktail from trans-Himalayan plants.

    Directory of Open Access Journals (Sweden)

    Priyanka Dhar

    Full Text Available We estimated the nutritive value, vitamin content, amino acid composition, fatty acid content, and mineral profile of a phytococktail comprising sea buckthorn (Hippophae rhamnoides, apricot (Prunus armeniaca, and roseroot (Rhodiola imbricata from trans-Himalaya. The free vitamin forms in the phytococktail were determined by rapid resolution liquid chromatography/tandem mass spectrometry (RRLC-MS/MS. Vitamin E and B-complex vitamins were detected as the principle vitamins. Reversed-phase high performance liquid chromatography (RP-HPLC with pre-column derivatization was used for identification and quantification of amino acids. Eight essential and eleven non-essential amino acids were quantified, and the content ranged between 76.33 and 9485.67 µg/g. Among the essential amino acids, L-methionine, L-phenylalanine, L-lysine, L-leucine, and L-histidine were found to be the dominant contributors. We also quantified the fatty acids in the phytococktail by using gas chromatography coupled with a flame ionization detector (GC-FID with fatty acid methyl esters (FAMEs derivatization. The analysis revealed the presence of 4 major fatty acids contributing to the total lipid content. Palmitic acid was found to be the rich source of saturated fatty acid (SFA and constituted ∼31% of the total lipid content. Among the unsaturated fatty acids (UFAs, palmitoleic acid (43.47%, oleic acid (20.89%, and linoleic acid (4.31% were prominent. The mineral profiling was carried out by inductively coupled plasma optical emission spectrometer (ICP-OES, and it was found to contain a number of important dietary mineral elements. The harsh climatic conditions, difficult terrain, and logistic constraints at high altitude regions of Indian trans-Himalayan cold desert lead to the scarcity of fresh fruits and vegetables. Therefore, the source of multiple vitamins, essential amino acids, fatty acids, and dietary minerals from the phytococktail would provide great health benefit

  14. Retrieval of snow albedo and grain size using reflectance measurements in Himalayan basin

    Directory of Open Access Journals (Sweden)

    H. S. Negi


    Full Text Available In the present paper, spectral reflectance measurements of Himalayan seasonal snow were carried out and analysed to retrieve the snow albedo and effective grain size. The asymptotic radiative transfer (ART theory was applied to retrieve the plane and spherical albedo. The retrieved plane albedo was compared with the measured spectral albedo and a good agreement was observed with ±10% differences. Retrieved integrated albedo was found within ±6% difference with ground observed broadband albedo. The retrieved snow grain sizes using different models based on the ART theory were compared for various snow types and it was observed that the grain size model using two channel method (one in visible and another in NIR region can work well for the Himalayan seasonal snow and it was found consistent with temporal changes in grain size. This method can work very well for clean, dry snow as in the upper Himalaya, but sometimes, due to the low reflectances (<20% using wavelength 1.24 μm, the ART theory cannot be applied, which is common in lower and middle Himalayan old snow. This study is important for monitoring the Himalayan cryosphere using air-borne or space-borne sensors.

  15. Complexities and Controversies in Himalayan Research: A Call for Collaboration and Rigor for Better Data

    Directory of Open Access Journals (Sweden)

    Surendra P. Singh


    Full Text Available The Himalaya range encompasses enormous variation in elevation, precipitation, biodiversity, and patterns of human livelihoods. These mountains modify the regional climate in complex ways; the ecosystem services they provide influence the lives of almost 1 billion people in 8 countries. However, our understanding of these ecosystems remains rudimentary. The 2007 Intergovernmental Panel on Climate Change report that erroneously predicted a date for widespread glacier loss exposed how little was known of Himalayan glaciers. Recent research shows how variably glaciers respond to climate change in different Himalayan regions. Alarmist theories are not new. In the 1980s, the Theory of Himalayan Degradation warned of complete forest loss and devastation of downstream areas, an eventuality that never occurred. More recently, the debate on hydroelectric construction appears driven by passions rather than science. Poor data, hasty conclusions, and bad science plague Himalayan research. Rigorous sampling, involvement of civil society in data collection, and long-term collaborative research involving institutions from across the Himalaya are essential to improve knowledge of this region.

  16. Engaging the state: ethnic patronage and cultural politics in the eastern Himalayan borderland

    DEFF Research Database (Denmark)

    Chettri, Mona


    In the eastern Himalayan borderland, state-led initiatives have led to the transformation of pre-existing patronage networks and placed ethnic identity at the core of regional politics. Based on ethnographic research in Sikkim, the paper illustrates the prolific rise of affirmative action politics...

  17. Effects of experience and commercialisation on survival in Himalayan mountaineering: retrospective cohort study. (United States)

    Westhoff, John L; Koepsell, Thomas D; Littell, Christopher T


    To determine whether previous Himalayan experience is associated with a decreased risk of climbing death, and whether mountaineers participating in commercial expeditions differ in their risk of death relative to those participating in traditional climbs. Retrospective cohort study. Expeditions in the Nepalese Himalayan peaks, from 1 January 1970 to the spring climbing season in 2010. 23,995 non-porters venturing above base camp on 39,038 climbs, 23,295 on 8000 m peaks. Death. After controlling for use of standard route, peak, age, season, sex, summit success, and year of expedition, increased Himalayan experience was not associated with a change in the odds of death (odds ratio 1.00, 95% confidence interval 0.96 to 1.05, P = 0.904). Participation in a commercial climb was associated with a 37% lower odds of death relative to a traditional venture, although not significantly (0.63, 0.37 to 1.09, P = 0.100). Choice of peak was clearly associated with altered odds of death (omnibus P<0.001); year of expedition was associated with a significant trend toward reduced odds of death (0.98, 0.96 to 0.99, P = 0.011). No net survival benefit is associated with increased Himalayan experience or participation in a traditional (versus commercial) venture. The incremental decrease in risk associated with calendar year suggests that cumulative, collective knowledge and general innovation are more important than individual experience in improving the odds of survival.

  18. Diversity and feeding strategies of soil microfauna along elevation gradients in Himalayan cold deserts

    Czech Academy of Sciences Publication Activity Database

    Devetter, Miloslav; Háněl, Ladislav; Řeháková, Klára; Doležal, J.


    Roč. 12, č. 11 (2017), č. článku e0187646. E-ISSN 1932-6203 R&D Projects: GA MŠk(CZ) LTC17019 Institutional support: RVO:60077344 Keywords : diversity * feeding strategies * soil microfauna * Himalayan cold deserts Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 2.806, year: 2016

  19. Distributional congruence of mammalian herbivores in the Trans-Himalayan Mountains

    NARCIS (Netherlands)

    Namgail, T.; Wieren, van S.E.; Prins, H.H.T.


    Large-scale distribution and diversity patterns of mammalian herbivores, especially less charismatic species in alpine environments remain little understood. We studied distributional congruence of mammalian herbivores in the Trans-Himalayan region of Ladakh to see if the distributions of less

  20. Deformation mechanisms in the frontal Lesser Himalayan Duplex in Sikkim Himalaya, India (United States)

    Matin, Abdul; Mazumdar, Sweety


    Understanding deformation mechanisms in Himalayan rocks is a challenging proposition due to the complex nature of the deformed rocks and their genesis. Crustal deformation in the Himalayan thrust belt typically occurs in elastico-frictional (EF) or quasi-plastic (QP) regimes at depths controlled mainly by regional strain-rate and geothermal gradient. However, material property, grain-size and their progressive changes during deformation are also important controlling factors. We present evidence of EF deformation from Gondwana rocks developed during the emplacement of one of the frontal horses (Jorthang horse) in the Lesser Himalayan Duplex (LHD) structure associated with Lesser Himalayan rocks in the footwall of the Ramgarh thrust in the Rangit window near Jorthang in the Sikkim Himalaya. The rocks in the horse exhibit systematic changes in microand meso-structures from an undeformed protolith to cataclasite suggesting that it was emplaced under elastico-frictional conditions. Meso- to micro-scale shear fractures are seen developed in Gondwana sandstone and slate while intercalated fine-grained shale-coal-carbonates are deformed by cataclastic flow suggesting that material property and grain-size have played an important role in the deformation of the Jorthang horse. In contrast, the hanging wall schists and quartzites of the Ramgarh thrust exhibit quasi-plastic deformation structures. This suggests that the Jorthang horse was emplaced under shallower crustal conditions than the antiformally folded Ramgarh thrust sheet even though the Ramgarh sheet presently overlies the Jorthang horse.

  1. Himalayan Vultures in Khodpe, far-west Nepal: is there any threat?

    Directory of Open Access Journals (Sweden)

    Manoj Kumar Joshi


    Full Text Available There is evidence that Himalayan Vulture Gyps himalayensis is susceptible to the veterinary drug diclofenac, which is responsible for the decline of other Gyps species across South Asia.  Unlike other Gyps species, there is little quantitative data to assess Himalayan Vultures population.  Based on observation, we analyzed the flock size and breeding success of the Himalayan Vultures on two cliffs of Khodpe in Baitadi District, far-west Nepal.  The mean flock size of Himalayan Vulture was 25.83±6.33.  Overall breeding success was 90.9% based on active nests.  We also conducted a questionnaire survey to assess the perceived threats in the view of local people to vultures and these threats include loss of food, veterinary drug, lack of proper nest sites, and lack of public awareness.  Additionally, 76% of the respondents felt that vultures were decreasing in the area, 94.7% were not aware of the toxicity of diclofenac to vultures, and very few (2% knew about the availability of meloxicam as a safe alternative drug.  The colony we studied is one of the few remaining known breeding populations, which provide baseline information from far-west Nepal, thus we recommend for conservation and continuous monitoring of this species to understand their population change and breeding biology. 

  2. High-resolution monitoring of Himalayan glacier dynamics using unmanned aerial vehicles

    NARCIS (Netherlands)

    Immerzeel, W. W.|info:eu-repo/dai/nl/290472113; Kraaijenbrink, P. D A; Shea, J. M.; Shrestha, A. B.; Pellicciotti, F.; Bierkens, M. F P|info:eu-repo/dai/nl/125022794; De Jong, S. M.|info:eu-repo/dai/nl/120221306


    Himalayan glacier tongues are commonly debris covered and they are an important source of melt water. However, they remain relatively unstudied because of the inaccessibility of the terrain and the difficulties in field work caused by the thick debris mantles. Observations of debris-covered glaciers

  3. Populations of Bactrocera oleae (Diptera: Tephritidae) and Its Parasitoids in Himalayan Asia (United States)

    For a biological control program against olive fruit fly, Bactrocera oleae Rossi, olives were collected in the Himalayan foothills (China, Nepal, India, and Pakistan) to discover new natural enemies. Wild olives, Olea europaea ssp. cuspidata (Wall ex. G. Don), were sparsely distributed and fly-infes...

  4. Counter-intuitive influence of Himalayan river morphodynamics on Indus Civilisation urban settlements. (United States)

    Singh, Ajit; Thomsen, Kristina J; Sinha, Rajiv; Buylaert, Jan-Pieter; Carter, Andrew; Mark, Darren F; Mason, Philippa J; Densmore, Alexander L; Murray, Andrew S; Jain, Mayank; Paul, Debajyoti; Gupta, Sanjeev


    Urbanism in the Bronze-age Indus Civilisation (~4.6-3.9 thousand years before the present, ka) has been linked to water resources provided by large Himalayan river systems, although the largest concentrations of urban-scale Indus settlements are located far from extant Himalayan rivers. Here we analyse the sedimentary architecture, chronology and provenance of a major palaeochannel associated with many of these settlements. We show that the palaeochannel is a former course of the Sutlej River, the third largest of the present-day Himalayan rivers. Using optically stimulated luminescence dating of sand grains, we demonstrate that flow of the Sutlej in this course terminated considerably earlier than Indus occupation, with diversion to its present course complete shortly after ~8 ka. Indus urban settlements thus developed along an abandoned river valley rather than an active Himalayan river. Confinement of the Sutlej to its present incised course after ~8 ka likely reduced its propensity to re-route frequently thus enabling long-term stability for Indus settlements sited along the relict palaeochannel.

  5. Role of glaciers in watershed hydrology: a preliminary study of a "Himalayan catchment"

    Directory of Open Access Journals (Sweden)

    R. J. Thayyen


    Full Text Available A large number of Himalayan glacier catchments are under the influence of humid climate with snowfall in winter (November–April and south-west monsoon in summer (June–September dominating the regional hydrology. Such catchments are defined as "Himalayan catchment", where the glacier meltwater contributes to the river flow during the period of annual high flows produced by the monsoon. The winter snow dominated Alpine catchments of the Kashmir and Karakoram region and cold-arid regions of the Ladakh mountain range are the other major glacio-hydrological regimes identified in the region. Factors influencing the river flow variations in a "Himalayan catchment" were studied in a micro-scale glacier catchment in the Garhwal Himalaya, covering an area of 77.8 km2. Three hydrometric stations were established at different altitudes along the Din Gad stream and discharge was monitored during the summer ablation period from 1998 to 2004, with an exception in 2002. These data have been analysed along with winter/summer precipitation, temperature and mass balance data of the Dokriani glacier to study the role of glacier and precipitation in determining runoff variations along the stream continuum from the glacier snout to 2360 m a.s.l. The study shows that the inter-annual runoff variation in a "Himalayan catchment" is linked with precipitation rather than mass balance changes of the glacier. This study also indicates that the warming induced an initial increase of glacier runoff and subsequent decline as suggested by the IPCC (2007 is restricted to the glacier degradation-derived component in a precipitation dominant Himalayan catchment and cannot be translated as river flow response. The preliminary assessment suggests that the "Himalayan catchment" could experience higher river flows and positive glacier mass balance regime together in association with strong monsoon. The important role of glaciers in this precipitation dominant system is

  6. Pollinator scarcity drives the shift to delayed selfing in Himalayan mayapple Podophyllum hexandrum (Berberidaceae) (United States)

    Xiong, Ying-Ze; Fang, Qiang; Huang, Shuang-Quan


    Recent molecular phylogenetics have indicated that American mayapple (mainly self-incompatible, SI) and Himalayan mayapple, which was considered to be self-compatible (SC), are sister species with disjunct distribution between eastern Asia and eastern North America. We test a hypothesis that the persistence of this early spring flowering herb in the Himalayan region is attributable to the transition from SI to SC, the capacity for selfing in an unpredictable pollination environment. Pollinator observations were conducted in an alpine meadow with hundreds of Himalayan mayapple (Podophyllum hexandrum Royle) individuals over 2 years. To examine autogamy, seed set under different pollination treatments was compared. To clarify whether automatic self-pollination is achieved by movement of the pistil as a previous study suggested, we measured incline angles of the pistil and observed flower movement during anthesis using video. Floral visitors to the nectarless flowers were very rare, but solitary bees and honeybees could be potential pollinators. Seed set of bagged flowers was not significantly different from that of open-pollinated, self- or cross-pollinated flowers. However, removal of petals or stamens lowered seed yield. The angles of inclination of pistils did not change during the process of pollination. Automatic self-pollination was facilitated by petals closing and stamens moving simultaneously to contact the stigma. Stigmatic pollen load increased little during the day time, in contrast to a sharp increase when the flowers closed during the night-time. These observations indicated that Himalayan mayapple was SC and delayed self-pollination was facilitated by the movement of petals rather than the pistil. Compared with SI American mayapple, no obvious inbreeding depression in SC Himalayan mayapple may contribute its existence in the uplifting zone. A scarcity of pollinators may have driven the shift to delayed selfing in P. hexandrum.

  7. Tibet- Himalayan Analogs of Pan-African Shear Zones : Implications for Neoproterozoic Tectonics (United States)

    Attoh, K.; Brown, L. D.


    Large-scale shear zones are distinct features of Tibet-Himalayan orogen and the Pan-African Trans-Saharan belt. Prominent examples in the Pan-African-belt extend for ~2500 km from the Sahara to the Gulf of Guinea and are characterized by right-slip movements. The NS shear zones, such as 4°50’-Kandi shear zone (KSZ) are complemented by NE-SW shear zones that preserve a record of sinistral movements and are represented by the Central Cameroon shear zone (CCSZ) in the eastern part of the Pan-African domain. The West African shear zones project into similar structures in the Borborema Province of northeast Brazil. In addition, the Pan-African belt preserves structures and rock assemblages that indicate subduction-collision tectonics We propose that structures of Tibet-Himalayan collisional orogen are instructive analogs of the Pan-African structures where: (i) the Pan-African front corresponds to the Main Himalayan thrust and it’s splays; (ii) the main Pan-African suture zone is analogous to the Indus-Tsangpo suture in the Tibet-Himalayan belt; (iii) the 4°50’-KSZ corresponds to Karakoram and it’s linkages with Jiali fault system and (iv) left-slip CCSZ and related shear zones are analogs of Altyn Tagh and Kumlun faults and their splays. This suggests the operation of escape-type tectonics in the Neoproterozoic belt of West-Africa and predicts the nature of the deep structures in the Cenozoic Tibet-Himalayan orogen.

  8. The Australasian frog family Ceratobatrachidae in China, Myanmar and Thailand: discovery of a new Himalayan forest frog clade (United States)

    YAN, Fang; JIANG, Ke; WANG, Kai; JIN, Jie-Qiong; SUWANNAPOOM, Chatmongkon; LI, Cheng; Jens, V. VINDUM; Rafe, M. BROWN; CHE, Jing


    In an effort to study the systematic affinities and specieslevel phylogenetic relationships of the enigmatic anurans variably assigned to the genera Ingerana or Limnonectes (family Dicroglossidae), we collected new molecular sequence data for five species including four Himalayan taxa, Limnonectes xizangensis, Lim. medogensis, Lim. alpine, Ingerana borealis and one southeast Asian species, I. tasanae, and analyzed these together with data from previous studies involving other ostensibly related taxa. Our surprising results demonstrate unequivocally that Lim. xizangensis, Lim. medogensis and Lim. alpine form a strongly supported clade, the sister-group of the family Australasian forest frog family Ceratobatrachidae. This discovery requires an expansion of the definition of Ceratobatrachidae and represents the first record of this family in China. These three species are distinguished from the species of Ingerana and Limnonectes by the: (1) absence of interdigital webbing of the foot, (2) absence of terminal discs on fingers and toes, (3) absence of circumarginal grooves on the fingers and toes, and (4) absence of tarsal folds. Given their phylogenetic and morphological distinctiveness, we assign them to the oldest available generic name for this clade, Liurana Dubois 1987, and transfer Liurana from Dicroglossidae to the family Ceratobatrachidae. In contrast, Ingerana tasanae was found to be clustered with strong support with the recently described genus Alcalus (Ceratobatrachidae), a small clade of otherwise Sundaic species; this constitutes a new record of the family Ceratobatrachidae for Myanmar and Thailand. Finally, Ingerana borealis clustered with the "true" Ingerana (family Dicroglossidae), for which the type species is I. tenasserimensis. PMID:26828029

  9. Expedition 354 on the Bengal fan: a Neogene record of Himalayan erosion (United States)

    France-Lanord, C.; Spiess, V.; Schwenk, T.; Klaus, A.; Galy, A.


    Drilling in the Bengal fan generated a comprehensive record of Himalayan erosion over the Neogene and Quaternary. It documents the interplay between Himalayan tectonic and the monsoon. The fan is predominantly composed of detrital turbiditic sediments originating from Himalayan rivers, and transported through the delta and shelf canyon, supplying turbidity currents loaded with a wide spectrum of grain sizes. Turbiditic deposition makes that record at a given site is discontinuous which was the reason for an E-W transect approach. Exp. 354 drilled seven sites along a 320 km E-W transect at 8°N allowing the restitution of an almost complete record of Himalayan erosion at the scale of the Neogene. In spite of the transect's extension, a long absence of deposition was observed between 0.6 to 1.2 Ma indicating that turbiditic depocenter was derived more to the West for ca. 600 kyr. Turbidites have clear Himalayan origin with close mineralogical and isotopic analogy with those of the modern Ganga-Brahmaputra river sediments. Geochemistry shows relatively stable compositions throughout the Neogene and Quaternary and reveal a very weak regime of chemical weathering with no significant variation through time. Concentrations in mobile elements such as Na and K relative to Al are significantly higher than in modern sediments suggesting that weathering is amplified in the modern time. Low weathering of the sediments at 8°N indicates that erosion was dominated by physical processes and that transport is rapid enough to prevent evolution of particles in the floodplain. In the modern Himalaya, low weathering is achieved primarily by landslides and rapid transfer through the floodplain, i.e. limited recycling of sediment deposited in the floodplain. Both processes are favoured by the seasonality and the intensity of the monsoon. Although relatively stable, source tracers such as Sr-Nd isotopic compositions, and detrital carbonate compositions show organised variations with time

  10. Large paleoearthquake timing and displacement near Damak in eastern Nepal on the Himalayan Frontal Thrust (United States)

    Wesnousky, Steven G.; Kumahara, Yasuhiro; Chamlagain, Deepak; Pierce, Ian K.; Reedy, Tabor; Angster, Stephen J.; Giri, Bibek


    An excavation across the Himalayan Frontal Thrust near Damak in eastern Nepal shows displacement on a fault plane dipping 22° has produced vertical separation across a scarp equal to 5.5 m. Stratigraphic, structural, geometrical, and radiocarbon observations are interpreted to indicate that the displacement is the result of a single earthquake of 11.3 ± 3.5 m of dip-slip displacement that occurred 1146-1256 A.D. Empirical scaling laws indicate that thrust earthquakes characterized by average displacements of this size may produce rupture lengths of 450 to >800 km and moment magnitudes Mw of 8.6 to >9. Sufficient strain has accumulated along this portion of the Himalayan arc during the roughly 800 years since the 1146-1256 A.D. earthquake to produce another earthquake displacement of similar size.

  11. Breeding biology and conservation strategy of the Himalayan swiftlet (Aerodramus brevirostris innominata) in southern China


    Bin Wang; Youhui Shen; Qingyi Liao; Jianzhang Ma


    From April 1994 to November 2007, we studied the breeding biology of the Himalayan swiftlet (Aerodramus brevirostris innominata) based on field investigations, behavior observations, and bird bandings in the Shenjing Cave of Hupingshan National Nature Reserve, Hunan Province. Overall, we found a total breeding population of 2,000 swiftlets in the cave. The Himilayan swiftlet is a summer migrant in the area which arrives in early April and departs in early November. This species is monogamous ...

  12. Effects of experience and commercialisation on survival in Himalayan mountaineering: retrospective cohort study (United States)

    Koepsell, Thomas D; Littell, Christopher T


    Objectives To determine whether previous Himalayan experience is associated with a decreased risk of climbing death, and whether mountaineers participating in commercial expeditions differ in their risk of death relative to those participating in traditional climbs. Design Retrospective cohort study. Setting Expeditions in the Nepalese Himalayan peaks, from 1 January 1970 to the spring climbing season in 2010. Participants 23 995 non-porters venturing above base camp on 39 038 climbs, 23 295 on 8000 m peaks. Outcome Death. Results After controlling for use of standard route, peak, age, season, sex, summit success, and year of expedition, increased Himalayan experience was not associated with a change in the odds of death (odds ratio 1.00, 95% confidence interval 0.96 to 1.05, P=0.904). Participation in a commercial climb was associated with a 37% lower odds of death relative to a traditional venture, although not significantly (0.63, 0.37 to 1.09, P=0.100). Choice of peak was clearly associated with altered odds of death (omnibus P<0.001); year of expedition was associated with a significant trend toward reduced odds of death (0.98, 0.96 to 0.99, P=0.011). Conclusions No net survival benefit is associated with increased Himalayan experience or participation in a traditional (versus commercial) venture. The incremental decrease in risk associated with calendar year suggests that cumulative, collective knowledge and general innovation are more important than individual experience in improving the odds of survival. PMID:22695902

  13. Sediment pathways and emergence of Himalayan source material in the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Krishna, K.S.; Ismaiel, M.; Srinivas, K.; Gopala Rao, D.; Mishra, J.; Saha, D.

    . R., Emmel, F. J. and Moore, D. G., The Bengal Fan: geometry, stratigraphy, history and processes. Mar. Petrol. Geol., 2003, 19, 1191–1223. 26. Bull, J. M. and Scrutton, R. A., Seismic reflection images of intraplate deformation, central Indian... information on the linkage among Himalayan tectonics, Asian climate and erosional history of the Himalaya. There is a general belief that the sediment dis- charge from the Himalaya to the BoB had begun around the Eocene (~40 Ma)9...

  14. Perineal burn contractures: An experience in tertiary hospital of a Himalayan state

    Directory of Open Access Journals (Sweden)

    Thakur Jagdeep


    Full Text Available Perineal burn contracture is a rare burn sequel. We conducted a retrospective analysis of cases with perineal burn contractures managed in a tertiary care centre of a Himalayan state. We found that all cases sustained burn injury from burning firewood and the time of presentation was two to six years after the burn injury. We analyzed our treatment method and have classified these contractures into two types.

  15. Reconnaissance Rb-Sr dates for the Himalayan Central Gneiss, Northwest India

    International Nuclear Information System (INIS)

    Powell, C. McA.; Crawford, A.R.; Armstrong, R.L.; Wynne-Edwards, H.R.; Prakash, R.


    Rb-Sr analysis of whole-rock samples and biotite and biotite - or muscovite - whole rock pairs suggests that the Himalayan Central Gneiss in the crystalline nappes of the Lesser Himalaya and the root zone in the High Himalaya was formed during Oligocene to mid-Miocene times by deformation and metamorphism of older rocks, including Precambrian. Four whole-rock samples from the Almora-Askot thrust sheets define an isochron of 1620 +- 90 Ma with a high initial 87 Sr/ 86 Sr ratio of 0.749 +- 0.007; other single whole-rock samples give dates in the range 268 to 1065 Ma, assuming an initial 87 Sr/ 86 Sr ratio of 0.704. These dates are considered to represent either depositional or early instructive/deformational events. Three biotite-whole rock pairs from the root zone of the Himalayan Central Gneiss in Lahaul give aqes of 16 to 19 Ma and two muscovite-whole rock pairs give similar mid-Cenozoic ages (12 and 26 Ma); two muscovite-whole rock pairs give Paleozoic ages, which suggests incomplete resetting of the muscovite by the Cenozoic metamorphism. The pattern of ages is similar to recent results from adjacent areas, and consistent with models of Himalayan tectonics involving formation of the Central Gneiss from older Indian crust during the mid-Cenozoic. (auth.)

  16. Probabilistic Seismic Hazard Assessment for Himalayan-Tibetan Region from Historical and Instrumental Earthquake Catalogs (United States)

    Rahman, M. Moklesur; Bai, Ling; Khan, Nangyal Ghani; Li, Guohui


    The Himalayan-Tibetan region has a long history of devastating earthquakes with wide-spread casualties and socio-economic damages. Here, we conduct the probabilistic seismic hazard analysis by incorporating the incomplete historical earthquake records along with the instrumental earthquake catalogs for the Himalayan-Tibetan region. Historical earthquake records back to more than 1000 years ago and an updated, homogenized and declustered instrumental earthquake catalog since 1906 are utilized. The essential seismicity parameters, namely, the mean seismicity rate γ, the Gutenberg-Richter b value, and the maximum expected magnitude M max are estimated using the maximum likelihood algorithm assuming the incompleteness of the catalog. To compute the hazard value, three seismogenic source models (smoothed gridded, linear, and areal sources) and two sets of ground motion prediction equations are combined by means of a logic tree on accounting the epistemic uncertainties. The peak ground acceleration (PGA) and spectral acceleration (SA) at 0.2 and 1.0 s are predicted for 2 and 10% probabilities of exceedance over 50 years assuming bedrock condition. The resulting PGA and SA maps show a significant spatio-temporal variation in the hazard values. In general, hazard value is found to be much higher than the previous studies for regions, where great earthquakes have actually occurred. The use of the historical and instrumental earthquake catalogs in combination of multiple seismogenic source models provides better seismic hazard constraints for the Himalayan-Tibetan region.

  17. Wave like signatures in aerosol optical depth and associated radiative impacts over the central Himalayan region

    Energy Technology Data Exchange (ETDEWEB)

    Shukla, K. K.; Phanikumar, D. V.; Kumar, K.  Niranjan; Reddy, Kishore; Kotamarthi, V. R.; Newsom, Rob K.; Ouarda, Taha B. M. J.


    In this study, we present a case study on 16 October 2011 to show the first observational evidence of the influence of short period gravity waves in aerosol transport during daytime over the central Himalayan region. The Doppler lidar data has been utilized to address the daytime boundary layer evolution and related aerosol dynamics over the site. Mixing layer height is estimated by wavelet covariance transform method and found to be ~ 0.7 km, AGL. Aerosol optical depth observations during daytime revealed an asymmetry showing clear enhancement during afternoon hours as compared to forenoon. Interestingly, Fourier and wavelet analysis of vertical velocity and attenuated backscatter showed similar 50-90 min short period gravity wave signatures during afternoon hours. Moreover, our observations showed that gravity waves are dominant within the boundary layer implying that the daytime boundary layer dynamics is playing a vital role in transporting the aerosols from surface to the top of the boundary layer. Similar modulations are also evident in surface parameters like temperature, relative humidity and wind speed indicating these waves are associated with the dynamical aspects over Himalayan region. Finally, time evolution of range-23 height indicator snapshots during daytime showed strong upward velocities especially during afternoon hours implying that convective processes through short period gravity waves plays a significant role in transporting aerosols from the nearby valley region to boundary layer top over the site. These observations also establish the importance of wave induced daytime convective boundary layer dynamics in the lower Himalayan region.

  18. Multivariate statistical techniques for the evaluation of surface water quality of the Himalayan foothills streams, Pakistan (United States)

    Malik, Riffat Naseem; Hashmi, Muhammad Zaffar


    Himalayan foothills streams, Pakistan play an important role in living water supply and irrigation of farmlands; thus, the water quality is closely related to public health. Multivariate techniques were applied to check spatial and seasonal trends, and metals contamination sources of the Himalayan foothills streams, Pakistan. Grab surface water samples were collected from different sites (5-15 cm water depth) in pre-washed polyethylene containers. Fast Sequential Atomic Absorption Spectrophotometer (Varian FSAA-240) was used to measure the metals concentration. Concentrations of Ni, Cu, and Mn were high in pre-monsoon season than the post-monsoon season. Cluster analysis identified impaired, moderately impaired and least impaired clusters based on water parameters. Discriminant function analysis indicated spatial variability in water was due to temperature, electrical conductivity, nitrates, iron and lead whereas seasonal variations were correlated with 16 physicochemical parameters. Factor analysis identified municipal and poultry waste, automobile activities, surface runoff, and soil weathering as major sources of contamination. Levels of Mn, Cr, Fe, Pb, Cd, Zn and alkalinity were above the WHO and USEPA standards for surface water. The results of present study will help to higher authorities for the management of the Himalayan foothills streams.


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    Full Text Available Markus Viehbeck (ed., 2017. Transcultural Encounters in the Himalayan Borderlands - Kalimpong as a "Contact Zone." Heidelberg: Heidelberg University Publishing, viii + 350 pp, ISBN 978-3-946054-58-0 (paperback 55.37USD. This volume is both a story of the hill station of Kalimpong, in the Eastern Himalayan region, and a study of transcultural dynamics seen through the prism of the local story of Kalimpong. A collaborative work, the book is the result of a conference that brought together various international scholars on the cultural history of Kalimpong. Scholars from Europe (Amsterdam, Copenhagen, Heidelberg, Manchester, Oxford, Roskilde, North America (Los Angeles, Toronto, Oceania (Melbourne, and India (Sikkim met in Kalimpong 6-8 March 2015, to discuss the topic from a variety of disciplinary viewpoints, including social history, Tibetan studies, anthropology, ethnography, religious studies, and postcolonial literature. The publisher, Heidelberg University Publishing, has included this anthology in its prestigious Heidelberg Studies on Transculturality. The history of Kalimpong, the other mountain town of Darjeeling and, more generally the entire Eastern Himalayan region, has been the focus of a specialized yet expanding scholarly field. Works center on Kalimpong (Hilker, 2005, Darjeeling (Besky, 2014; Sharma, 2011 and 2014; Warner, 2014, and the entire area of the Himalayan territories of Nepal, Sikkim, and Bhutan, as well as parts of Northern-Eastern India (Huber and Blackburn, 2012; McKay, 2007; Mullard, 2011; Phuntsho, 2013; Shneiderman, 2015. In this context, scholars note how Kalimpong and Darjeeling shared the same destiny: originally sparsely populated settlements in the foothills of the Himalayas, both villages were acquired in the nineteenth century by the English East India Company (Kalimpong was annexed in 1865 from the kingdom of Bhutan, and Darjeeling from the kingdom of Sikkim in 1835 to become British-ruled towns and

  20. Burial of thermally perturbed Lesser Himalayan mid-crust: Evidence from petrochemistry and P-T estimation of the western Arunachal Himalaya, India (United States)

    Goswami-Banerjee, Sriparna; Bhowmik, Santanu Kumar; Dasgupta, Somnath; Pant, Naresh Chandra


    In this work, we establish a dual prograde P-T path of the Lesser Himalayan Sequence (LHS) rocks from the western Arunachal Himalaya (WAH). The investigated metagranites, garnet- and kyanite-zone metapelites of the LHS are part of an inverted metamorphic sequence (IMS) that is exposed on the footwall side of the Main Central Thrust (MCT). Integrated petrographic, mineral chemistry, geothermobarometric (conventional and isopleth intersection methods) and P-T pseudosection modeling studies reveal a near isobaric (at P ~ 8-9 kbar) peak Barrovian metamorphism with increase in TMax from ~ 560 °C in the metagranite through ~ 590-600 °C in the lower and middle garnet-zone to ~ 600-630 °C in the upper garnet- and kyanite-zone rocks. The metamorphic sequence of the LHS additionally records a pre-Barrovian near isobaric thermal gradient in the mid crust (at ~ 6 kbar) from ~ 515 °C (in the middle garnet zone) to ~ 560-580 °C (in the upper garnet- and kyanite zone, adjoining the Main Central Thrust). Further burial (along steep dP/dT gradient) to a uniform depth corresponding to ~ 8-9 kbar and prograde heating of the differentially heated LHS rocks led to the formation of near isobaric metamorphic field gradient in the Barrovian metamorphic zones of the WAH. A combined critical taper and channel flow model is presented to explain the inverted metamorphic zonation of the rocks of the WAH.

  1. Evidence of Himalayan erosional event at approx. 0.5 Ma from a sediment core from the equatorial Indian Ocean in the vicinityof ODP Leg 116 sites

    Digital Repository Service at National Institute of Oceanography (India)

    Nath, B.N.; Gupta, S.M.; Mislankar, P.G.; Rao, B.R.; Parthiban, G.; Roelandts, I.; Patil, S.K.

    ; discrimination plots of Ca/Ti versus K/Ti and K sub(2)O/Al sub(2) O sub(3) and La/Yb ratios suggest a highly metamorphosed source such as higher Himalayan crystalline (HHC) series indicating two events of increased physical weathering and erosion in the Himalayan...

  2. Antibacterial and Antifungal Potential of Himalayan Medicinal Plants for Treating Wound Infections

    International Nuclear Information System (INIS)

    Habiba, U.; Ahmad, M.; Shinwari, S.; Sultana, S.; Zafar, M.; Shinwari, Z. K.


    Many bacterial and fungal strains are involved in wound infectious diseases as most of these strains become resistant to the most commonly used synthetic drugs in Himalayan region. Plant based natural products seem to be an alternative to this problem. The aim of this investigation was to evaluate the In vitro antibacterial and antifungal activities of 30 medicinal plants used in folk recipes by Himalayan people to treat wound infections against multi-drug resistant pathogens. In total of six medically important Myco-bacterial strains Streptococcus pyogenes, Staphylococcus aureus, Klebsiella pneumoniae, Pseudomonas aeruginosa, Candida albicans and Aspergillus niger were tested against methanolic plant extracts at 5 mg/ml concentration using agar disc well diffusion method to determined Minimum inhibitory concentrations (MICs). The plant extracts showed varied levels of MICs against test microorganisms. The strongest antibacterial activity was reported in methanolic extract of Cynadon dactylon (L.) Pers. against Klebsiella pneumoniae with 20.67±1.36 mm MICs, while Candida albicans was considered to be the most resistant pathogen with MICs 9.6±0.57 mm. The findings were compared with results obtained using standard antibiotics, aminooxanilic, ciprofloxacin, cefotaxime, fluconazole and itraconazole at conc. 5mg/ ml. The results provide an evidence of folk medicinal uses of plants among the Himalayan communities to treat wounds. Further research needs to be carried out to identify the active molecules and evaluate the in vivo antibacterial and antifungal activities as well as toxicity level with clinical trials to use full potential of these plants for drug discovery development to control wounds globally. (author)

  3. Penetrating head injury with bilateral eye avulsion due to Himalayan bear bite. (United States)

    Roka, Yam B; Roka, Narayani; Shrestha, Manzil; Puri, Puspa R; Adhikari, Hari B


    The Himalayan black bear (Ursus thibetanus or Selenarctos thibetanus), although an omnivore, is more carnivorous than its American counterpart. It is also more aggressive towards humans and is a threatened species because of the deforestation in the Himalayas. Furthermore, poverty, encroachment of the forest, extensive deforestation, lack of education and living near the forest are factors that increase the probability of such animal injuries. We report the case of a 35-year-old woman who suffered a severe penetrating head injury with scalp and bilateral eye avulsion, which was managed successfully. © 2012 The Authors. EMA © 2012 Australasian College for Emergency Medicine and Australasian Society for Emergency Medicine.

  4. Variable exhumation rates and variable displacement rates: Documenting recent slowing of Himalayan shortening in western Bhutan (United States)

    McQuarrie, Nadine; Tobgay, Tobgay; Long, Sean P.; Reiners, Peter W.; Cosca, Michael A.


    We link exhumational variability in space and time to the evolving geometry of the Himalayan fold–thrust belt in western Bhutan. By combining new and published geochronologic and thermochronologic data we document the burial age, peak temperatures and complete cooling history from 20 Ma to the present over an across-strike distance of ∼125 km. These integrated cooling curves highlight windows of fast exhumation that vary spatially and temporally. We propose that pulses of fast exhumation are a result of structures that facilitate the vertical motion of material, illustrated in sequentially-restored cross sections. Due to a range of permissible geometries at depth, we explore and evaluate the impact of geometry on kinematics and rates of deformation. The linked cooling history and cross sections provide estimates of both magnitude and timing of thrust sheet displacement and highlight temporal variability in potential shortening rates. Structural and chronologic data illustrate a general north to south progression of Himalayan deformation, with emplacement of the Main Central thrust (MCT), Paro thrust and Shumar thrust by 12 to no later than 9 Ma. Two different geometries and kinematic scenarios for the Lesser Himalayan duplex are proposed. A north to south propagating duplex system requires that the southern portion of that system, south of the MCT, deformed and cooled by 9 Ma, leaving only the southernmost thrust sheets, including the Main Boundary and Main Frontal thrusts, to deform between 9 and 0 Ma. This limited post 9 Ma shortening would necessitate a marked slowdown in convergence accommodated on the Main Himalayan thrust. A two-tiered duplex system, which allows for the Paro window duplex and the southern Baxa duplex to form simultaneously, permits duplex formation and accompanying exhumation until 6 Ma. Limited cooling from ∼200 °C to the surface post 6 Ma suggests either a decrease in shortening rates from 6 to 0 Ma or that duplex formation and

  5. Wave like signatures in aerosol optical depth and associated radiative impacts over the central Himalayan region

    Energy Technology Data Exchange (ETDEWEB)

    Shukla, K. K.; Phanikumar, D. V.; Kumar, K.  Niranjan; Reddy, Kishore; Kotamarthi, V. R.; Newsom, Rob K.; Ouarda, Taha B. M. J.


    Doppler Lidar and Multi-Filter Rotating Shadowband Radiometer (MFRSR) observations are utilized to show wave like signatures in aerosol optical depth (AOD) during daytime boundary layer evolution over the Himalayan region. Fourier analysis depicted 60–80 min periods dominant during afternoon hours, implying that observed modulations could be plausible reason for the AOD forenoon–afternoon asymmetry which was previously reported. Inclusion of wave amplitude in diurnal variation of aerosol radiative forcing estimates showed ~40% additional warming in the atmosphere relative to mean AOD. The present observations emphasize the importance of wave induced variations in AOD and radiation budget over the site.

  6. Siliguri: A Geopolitical Manoeuvre Corridor in the Eastern Himalayan Region for China and India

    Directory of Open Access Journals (Sweden)

    Hasan Yaser Malik


    Full Text Available Siliguri Corridor being part of Indian West Bengal is a diplomatic manoeuvre place located between Nepal, Bhutan, Bangladesh, India’s Seven Sister States and Chumbi Hills in the Eastern Himalayan Region. Being located at the crossroads and centrally situated between all the neighbouring countries the landlocked Siliguri has an especially economic and political value for the regional countries. The corridor being in close proximity to China and India’s Seven Sister States has added to the diplomatic mosaic of the Eastern Himalayan Region. The region consists of beautiful landscape, mountains and rivers which not only add to topographical diversity but also demographic mixture. Despite its geopolitical significance the area could not advance for not only being a northeastern border region but also for being a gateway to the Seven Sister States. Peripheral development of Siliguri Corridor is one of the reasons for illegal practices like smuggling and terrorism. In year 2002 Nepal, Bhutan and Bangladesh discussed a proposal to form a free trade corridor to simplify the goods transportation through Siliguri Corridor but no such pact could be concluded that would have avoided the activities like smuggling and terrorism mainly through economic and diplomatic ventures.

  7. Paddy crop yield estimation in Kashmir Himalayan rice bowl using remote sensing and simulation model. (United States)

    Muslim, Mohammad; Romshoo, Shakil Ahmad; Rather, A Q


    The Kashmir Himalayan region of India is expected to be highly prone to the change in agricultural land use because of its geo-ecological fragility, strategic location vis-à-vis the Himalayan landscape, its trans-boundary river basins, and inherent socio-economic instabilities. Food security and sustainability of the region are thus greatly challenged by these impacts. The effect of future climate change, increased competition for land and water, labor from non-agricultural sectors, and increasing population adds to this complex problem. In current study, paddy rice yield at regional level was estimated using GIS-based environment policy integrated climate (GEPIC) model. The general approach of current study involved combining regional level crop database, regional soil data base, farm management data, and climatic data outputs with GEPIC model. The simulated yield showed that estimated production to be 4305.55 kg/ha (43.05 q h(-1)). The crop varieties like Jhelum, K-39, Chenab, China 1039, China-1007, and Shalimar rice-1 grown in plains recorded average yield of 4783.3 kg/ha (47.83 q ha(-1)). Meanwhile, high altitude areas with varieties like Kohsaar, K-78 (Barkat), and K-332 recorded yield of 4102.2 kg/ha (41.02 q ha(-1)). The observed and simulated yield showed a good match with R (2) = 0.95, RMSE = 132.24 kg/ha, respectively.

  8. Dominant lactic acid bacteria and their technological properties isolated from the Himalayan ethnic fermented milk products. (United States)

    Dewan, Sailendra; Tamang, Jyoti Prakash


    Ethnic people of the Himalayan regions of India, Nepal, Bhutan and China consume a variety of indigenous fermented milk products made from cows milk as well as yaks milk. These lesser-known ethnic fermented foods are dahi, mohi, chhurpi, somar, philu and shyow. The population of lactic acid bacteria (LAB) ranged from 10(7) to 10(8) cfu/g in these Himalayan milk products. A total of 128 isolates of LAB were isolated from 58 samples of ethnic fermented milk products collected from different places of India, Nepal and Bhutan. Based on phenotypic characterization including API sugar test, the dominant lactic acid bacteria were identified as Lactobacillus bifermentans, Lactobacillus paracasei subsp. pseudoplantarum, Lactobacillus kefir, Lactobacillus hilgardii, Lactobacillus alimentarius, Lactobacillus paracasei subsp. paracasei, Lactobacillus plantarum, Lactococcus lactis subsp. lactis, Lactococcus lactis subsp. cremoris and Enterococcus faecium. LAB produced a wide spectrum of enzymes and showed high galactosidase, leucine-arylamidase and phosphatase activities. They showed antagonistic properties against selected Gram-negative bacteria. None of the strains produced bacteriocin and biogenic amines under the test conditions used. Most strains of LAB coagulated skim milk with a moderate drop in pH. Some strains of LAB showed a high degree of hydrophobicity, suggesting these strains may have useful adhesive potential. This paper is the first report on functional lactic acid bacterial composition in some lesser-known ethnic fermented milk products of the Himalayas.

  9. Remote Sensing of Cryosphere: Estimation of Mass Balance Change in Himalayan Glaciers (United States)

    Ambinakudige, Shrinidhi; Joshi, Kabindra


    Glacial changes are an important indicator of climate change. Our understanding mass balance change in Himalayan glaciers is limited. This study estimates mass balance of some major glaciers in the Sagarmatha National Park (SNP) in Nepal using remote sensing applications. Remote sensing technique to measure mass balance of glaciers is an important methodological advance in the highly rugged Himalayan terrain. This study uses ASTER VNIR, 3N (nadir view) and 3B (backward view) bands to generate Digital Elevation Models (DEMs) for the SNP area for the years 2002, 2003, 2004 and 2005. Glacier boundaries were delineated using combination of boundaries available in the Global land ice measurement (GLIMS) database and various band ratios derived from ASTER images. Elevation differences, glacial area, and ice densities were used to estimate the change in mass balance. The results indicated that the rate of glacier mass balance change was not uniform across glaciers. While there was a decrease in mass balance of some glaciers, some showed increase. This paper discusses how each glacier in the SNP area varied in its annual mass balance measurement during the study period.

  10. Estimating Regional Mass Balance of Himalayan Glaciers Using Hexagon Imagery: An Automated Approach (United States)

    Maurer, J. M.; Rupper, S.


    Currently there is much uncertainty regarding the present and future state of Himalayan glaciers, which supply meltwater for river systems vital to more than 1.4 billion people living throughout Asia. Previous assessments of regional glacier mass balance in the Himalayas using various remote sensing and field-based methods give inconsistent results, and most assessments are over relatively short (e.g., single decade) timescales. This study aims to quantify multi-decadal changes in volume and extent of Himalayan glaciers through efficient use of the large database of declassified 1970-80s era Hexagon stereo imagery. Automation of the DEM extraction process provides an effective workflow for many images to be processed and glacier elevation changes quantified with minimal user input. The tedious procedure of manual ground control point selection necessary for block-bundle adjustment (as ephemeral data is not available for the declassified images) is automated using the Maximally Stable Extremal Regions algorithm, which matches image elements between raw Hexagon images and georeferenced Landsat 15 meter panchromatic images. Additional automated Hexagon DEM processing, co-registration, and bias correction allow for direct comparison with modern ASTER and SRTM elevation data, thus quantifying glacier elevation and area changes over several decades across largely inaccessible mountainous regions. As consistent methodology is used for all glaciers, results will likely reveal significant spatial and temporal patterns in regional ice mass balance. Ultimately, these findings could have important implications for future water resource management in light of environmental change.

  11. Bionic Design for Mars Sampling Scoop Inspired by Himalayan Marmot Claw

    Directory of Open Access Journals (Sweden)

    Long Xue


    Full Text Available Cave animals are often adapted to digging and life underground, with claw toes similar in structure and function to a sampling scoop. In this paper, the clawed toes of the Himalayan marmot were selected as a biological prototype for bionic research. Based on geometric parameter optimization of the clawed toes, a bionic sampling scoop for use on Mars was designed. Using a 3D laser scanner, the point cloud data of the second front claw toe was acquired. Parametric equations and contour curves for the claw were then built with cubic polynomial fitting. We obtained 18 characteristic curve equations for the internal and external contours of the claw. A bionic sampling scoop was designed according to the structural parameters of Curiosity’s sampling shovel and the contours of the Himalayan marmot’s claw. Verifying test results showed that when the penetration angle was 45° and the sampling speed was 0.33 r/min, the bionic sampling scoops’ resistance torque was 49.6% less than that of the prototype sampling scoop. When the penetration angle was 60° and the sampling speed was 0.22 r/min, the resistance torque of the bionic sampling scoop was 28.8% lower than that of the prototype sampling scoop.

  12. Assessment of permafrost distribution maps in the Hindu Kush Himalayan region using rock glaciers mapped in Google Earth

    NARCIS (Netherlands)

    Schmid, M.O.; Baral, P.; Gruber, S.; Shahi, S.; Shrestha, T.; Stumm, D.; Wester, P.


    The extent and distribution of permafrost in the mountainous parts of the Hindu Kush Himalayan (HKH) region are largely unknown. A long tradition of permafrost research, predominantly on rather gentle relief, exists only on the Tibetan Plateau. Two permafrost maps are available digitally that

  13. Effective Reversible Immobilization of Captive Himalayan Black Bears (Selenarctos thibetanus laniger) with Medetomidine-Tiletamine-Zolazepam and Atipamezole. (United States)

    Arun, Attur Shanmugam; Krishna, Sanath; Antony, Linto; Pillai, Harikrishnan Chandran; Venkataramanappa, Manjunatha; Suresh, Sujay


    We used a combination of medetomidine and tiletamine-zolazepam to immobilize five Himalayan black bears (Selenarctos thibetanus laniger) in Bannerghatta Biological Park, Bangalore, India. Medetomidine and tiletamine-zolazepam were administered at 0.01 mg/kg and 0.5 mg/kg, respectively. We describe procedures and observations recorded during the immobilization.

  14. Magnitude of crustal shortening and structural framework of the easternmost Himalayan orogen, northern Indo-Burma Ranges of northeastern India (United States)

    Haproff, P. J.; Yin, A.


    Along-strike variation in crustal shortening throughout the Himalayan orogen has been attributed to (1) diachronous, eastward-increasing convergence, or (2) localized controls including pre-collisional stratigraphic configuration and climate. In this study, we present new geologic maps and balanced cross-sections across the easternmost segment of the Himalayan orogen, the N-S-trending N. Indo-Burma Ranges of northeastern India. First order structures are NE-dipping, km-wide ductile thrust shear zones with mylonitic fabrics indicating top-to-the SW motion. Major structures include the Mayodia klippe and Hunli window, generated during folding of the SW-directed Tidding thrust and duplexing of Lesser Himalayan rocks (LHS) at depth. Reconstruction of two balanced cross-sections yields minimum shortening estimates of 70% (48 km) and 71% (133 km), respectively. The widths of the orogen for each transect are 21 km and 54 km, respectively. Our percent strain values are comparable to that of western Arunachal Himalaya, reflecting eastward-increasing strain due to counterclockwise rotation of India during convergence or along-strike variation in India's subduction angle. However, shortening magnitudes much less than that of the Sikkim (641 km), Bhutan (414-615 km), and western Arunachal Himalaya (515-775 km) could signal eastward increasing shortening of a unique Himalayan stratigraphic framework, evidenced by few GHC rocks, absence of Tethyan strata, and an extensive subduction mélange and forearc complex.

  15. Constraining metamorphic rates through allanite and monazite petrochronology: a case study from the Miyar Valley (High Himalayan Crystalline of Zanskar, NW India) (United States)

    Robyr, Martin; Goswami-Banerjee, Sriparna


    Dating metamorphic rocks raises specific issues because metamorphism comprises a complex sequence of structural changes and chemical reactions that can be extended over millions or tens of millions of years so that metamorphic rocks cannot in general be said to have "an age". Therefore, an accurate interpretation of radiometric age data from metamorphic rocks requires first to establish the behavior of the isotopic system used for dating relative to the pressure and temperature (P-T) conditions that a metamorphic rock experienced. As the U-Th-Pb system in LREE-accessory phases like monazite and allanite is not easily reset during subsequent temperature increase, allanite and monazite U-Th-Pb ages are collectively interpreted as reflecting crystallization ages. As a consequence, to correctly interpret allanite and monazite crystallization ages, it is essential to accurately determine the physical conditions of their crystallization. A meticulous account of the chemical and textural evolution of monazite and allanite along a well constrained prograde pelitic sequence of the High Himalayan Crystalline of Zanskar (Miyar Valley; e.g. Robyr et al., 2002; 2006; 2014) reveals that: (1) the occurrence of the first metamorphic allanite coincides with the biotite-in isograd and (2) the formation of the first metamorphic monazite occurs at the staurolite-in isograd. The finding of both monazite and allanite as inclusion in staurolite porphyroblasts indicates that the breakdown of allanite and the formation of monazite occurred during staurolite crystallization. Thermobarometry results show that the metamorphic allanites are appeared in the 400-420 °C, while the signature of the first metamorphic monazite is found at ~ 600 °C with staurolite-in isograd. Allanite and monazite U-Th-Pb ages thus constrain the timing when the rocks reached the ~ 420 °C and ~ 600 °C isotherms respectively. In situ LA-ICPMS dating of coexisting allanite and monazite inclusions in garnet

  16. Reconstructing the paleogeography and subduction geodynamics of Greater India: how to apply Ockham's Razor? (United States)

    Van Hinsbergen, D. J. J.; Li, S.; Lippert, P. C.; Huang, W.; Advokaat, E. L.; Spakman, W.


    Key in understanding the geodynamics governing subduction and orogeny is reconstructing the paleogeography of `Greater India', the Indian plate lithosphere that subducted since Tibetan Himalayan continental crustal collision with Asia. Here, we discuss how the principle of Ockham's Razor, favoring the simplest scenario as the most likely, may apply to three perspectives on Greater India's paleogeography. We follow recent constraints suggesting a 58 Ma initial collision and update the kinematic restoration of intra-Asian shortening with a recently proposed Indochina extrusion model that reconciles long-debated large and small estimates of Indochina extrusion. The reconstruction is tested against Tibetan paleomagnetic rotation data, and against seismic tomographic constraints on paleo-subduction zone locations. The resulting restoration shows 1000-1200 km of post-collisional intra-Asian shortening, leaving a 2600-3400 km wide Greater India. Ockham's Razor from a paleogeographic, sediment provenance perspective would prefer a fully continental Greater India, although these sediments may also source from the Paleocene-Eocene west Indian orogen unrelated to the India-Asia collision. Ockham's Razor applied from a kinematic, paleomagnetic perspective, prefers major Cretaceous extension and `Greater India Basin' opening within Greater India, but data uncertainty may speculatively allow for minimal extension. Finally, from a geodynamic perspective, assuming a fully continental Greater India would require that the highest subduction rates recorded in the Phanerozoic would have been driven by a subduction of a lithosphere-crust assemblage more buoyant than the mantle, which seems physically improbable. Ockhams Razor thereby isolates the Greater India Basin hypothesis as the only scenario sustainable from all perspectives. Finally, we infer that the old pre-collisional lithosphere rapidly entered the lower mantle sustaining high subduction rates, whilst post

  17. Vertical profile of aerosols in the Himalayan region using an ultralight aircraft platform (United States)

    Singh, A.; Mahata, K.; Rupakheti, M.; Lawrence, M. G.; Junkermann, W.


    Indo-gangetic plain (IGP) and Himalayan foothills have large spatial and temporal heterogeneity in aerosols characteristics. Regional meteorology around 850-500 mb plays an important role in the transformation and transportation of aerosols from west Asia to IGP, into Himalayan foothill, as well to high-altitude region of the Himalayas. In order to quantify the vertical and horizontal variation of aerosol properties in the Himalayan , an airborne campaign was carried out in the Pokhara Valley/Nepal (83°50'-84°10' E, 25°7'-28°15' N, 815 masl ) in two phases: test flights during May 2016 and an intensive airborne sampling flight in December-January 2017. This paper provides an overview of airborne measurement campaign from the first phase of measurements in May 2016. A two-seater microlight aircraft (IKARUS C 42) was used as the aerial platform. This was deemed the feasible option in Nepal for an aerial campaign; technical specification of the aircraft include an approximately 6 hrs of flying time, short-take off run, > 100 kgs of payload, suitable for spiral upward and downward profiling. The instrument package consist of GRIMM 1.108 for particle size distribution from 0.3 to 20 um at 6 seconds time resolution, and TSI CPC 3375 for total ultrafine particle (UFP) concentration at 1 s. The package also includes a Magee Scientific Aethalometer (AE42) for aerosol absorption at seven different wavelengths. Meteorological parameters include temperature and dew point at a sampling rate of 1 Hz or higher. The paper provides a snapshot of observed vertical profile (from 800 to 4500masl) of aerosols size, number and black carbon over one of populated mountain valley in Nepal during the pre-monsoon season. During the airborne measurement, local fires- mostly agriculture burn were observed, however no large scale forest fire was captured. Sharp morning and afternoon gradients were observed in the vertical profile for aerosol number and size, mostly dominated by 2000 masl

  18. Botany, ethnomedicines, phytochemistry and pharmacology of Himalayan paeony (Paeonia emodi Royle.). (United States)

    Ahmad, Mushtaq; Malik, Khafsa; Tariq, Akash; Zhang, Guolin; Yaseen, Ghulam; Rashid, Neelam; Sultana, Shazia; Zafar, Muhammad; Ullah, Kifayat; Khan, Muhammad Pukhtoon Zada


    Himalayan paeony (Paeonia emodi Royle.) is an important species used to treat various diseases. This study aimed to compile the detailed traditional medicinal uses, phytochemistry, pharmacology and toxicological investigations on P. emodi. This study also highlights taxonomic validity, quality of experimental designs and shortcomings in previously reported information on Himalayan paeony. The data was extracted from unpublished theses (Pakistan, China, India and Nepal), and different published research articles confined to pharmacology, phytochemistry and antimicrobial activities using different databases through specific keywords. The relevant information regarding medicinal uses, taxonomic/common names, part used, collection and identification source, authentication, voucher specimen number, plant extracts and their characterization, isolation and identification of phytochemicals, methods of study in silico, in vivo or in vitro, model organism used, dose and duration, minimal active concentration, zone of inhibition (antimicrobial study), bioactive compound(s), mechanism of action on single or multiple targets, and toxicological information. P. emodi is reported for diverse medicinal uses with pharmacological properties like antioxidant, nephroprotective, lipoxygenase inhibitory, cognition and oxidative stress release, cytotoxic, anti-inflammatory, antiepileptic, anticonvulsant, haemaglutination, alpha-chymotrypsin inhibitory, hepatoprotective, hepatic chromes and pharmacokinetics of carbamazepine expression, β-glucuronidase inhibitory, spasmolytic and spasmogenic, and airway relaxant. Data confined to its taxonomic validity, shows 10% studies with correct taxonomic name while 90% studies with incorrect taxonomic, pharmacopeial and common names. The literature reviewed, shows lack of collection source (11 reports), without proper source of identification (15 reports), 33 studies without voucher specimen number, 26 reports lack information on authentic herbarium

  19. [Autoerotic fatalities in Greater Dusseldorf]. (United States)

    Hartung, Benno; Hellen, Florence; Borchard, Nora; Huckenbeck, Wolfgang


    Autoerotic fatalities in the Greater Dusseldorf area correspond to the relevant medicolegal literature. Our results included exclusively young to middle-aged, usually single men who were found dead in their city apartments. Clothing and devices used showed a great variety. Women's or fetish clothing and complex shackling or hanging devices were disproportionately frequent. In most cases, death occurred due to hanging or ligature strangulation. There was no increased incidence of underlying psychiatric disorders. In most of the deceased no or at least no remarkable alcohol intoxication was found. Occasionally, it may be difficult to reliably differentiate autoerotic accidents, accidents occurring in connection with practices of bondage & discipline, dominance & submission (BDSM) from natural death, suicide or homicide.

  20. Planning for greater confinement disposal

    International Nuclear Information System (INIS)

    Gilbert, T.L.; Luner, C.; Meshkov, N.K.; Trevorrow, L.E.; Yu, C.


    A report that provides guidance for planning for greater-confinement disposal (GCD) of low-level radioactive waste is being prepared. The report addresses procedures for selecting a GCD technology and provides information for implementing these procedures. The focus is on GCD; planning aspects common to GCD and shallow-land burial are covered by reference. Planning procedure topics covered include regulatory requirements, waste characterization, benefit-cost-risk assessment and pathway analysis methodologies, determination of need, waste-acceptance criteria, performance objectives, and comparative assessment of attributes that support these objectives. The major technologies covered include augered shafts, deep trenches, engineered structures, hydrofracture, improved waste forms, and high-integrity containers. Descriptive information is provided, and attributes that are relevant for risk assessment and operational requirements are given. 10 refs., 3 figs., 2 tabs

  1. Outbreak of scrub typhus in the North East Himalayan region-Sikkim: An emerging threat

    Directory of Open Access Journals (Sweden)

    S Gurung


    Full Text Available Scrub typhus is an acute febrile illness that is known to be endemic in the South East Asian countries and the Western Pacific region. We here report an outbreak in the tiny Himalayan state of Sikkim. Patients with pyrexia of unknown origin were evaluated. They were screened by Weil-Felix test and the rapid immunochromatographic method. Samples that were positive by either Weil-Felix agglutination test or by rapid immunochromatography were confirmed by IgM enzyme-linked immunosorbent assay (ELISA. A total 204 samples were screened. Sixty-three patients were confirmed positive among which 42 were male and 21 were female. Effective management and early administration of antibiotics will help prevent the complications and mortality associated with scrub typhus.

  2. Climate-growth relationships of Abies spectabilis in a central Himalayan treeline ecotone (United States)

    Schwab, Niels; Kaczka, Ryszard J.; Schickhoff, Udo


    Climate warming is expected to induce treelines to advance to higher elevations. Empirical studies in diverse mountain ranges, however, give evidence of both advancing alpine treelines as well as rather insignificant responses. The large spectrum of responses is not fully understood. In the framework of investigating the sensitivity and response of a near-natural treeline ecotone in Rolwaling Himal, Nepal, to climate warming we present results from dendroclimatological analyses of Abies spectabilis (Himalayan Fir) increment cores. Tree ring width was measured and cross-dated. After standardization, the chronology was correlated with temperature and precipitation variables. Preliminary results point to positive correlations with autumn temperature and precipitation. We will present improved climate-growth relationships. The resulting climate - tree growth relationships may be used as an indication of future growth patterns and treeline dynamics under climate change conditions.

  3. Land use/cover changes, extreme events and ecohydrological responses in the Himalayan region (United States)

    Singh, R. B.


    Land use describes human activities on the earth, and forms a major element of the terrestrial ecosystem modified by humans in the Himalayan region, where developmental activities are increasing rapidly to support the tourism infrastructure. The unprecedented growth in population is putting extremely high pressure on the limited land available for cultivation. Land use and agricultural practices have undergone drastic changes since the mid-1960s through the introduction of development programmes and the application of various newly developed techniques in agrosciences. An analysis of the land use as it has occurred over the last 70 years suggests that it and property rights in the Upper Beas Basin are complex and dynamic. For example, people are giving importance to orchards because of their high profitability. Thus, some agricultural land has been encroached on by orchards. In addition, wastelands are now being used by people for orchards, agriculture and residential and commercial building. Since the Upper Beas River Basin is mountainous, it is fragile and prone to processes like soil erosion, slope instability, landslides and floods. Risks from natural hazards are increasing. However, the state of ecohydrological responses highlight that human-induced ecological changes can be largely proved at the microwatershed level. The findings are not extended to the Himalayan scale. There is also an uncertain correlation between anthropogenic activities (deforestation) in the mountains and hazards in the plains such as floods. Owing to a lack of basic research, there is little effective information which cannot be used for long-term effective monitoring of ecological and hydrological responses to global change. Such an uncertain situation calls for integrated watershed management and development using geographical information systems (GISs).

  4. Determining bioclimatic space of Himalayan alder for agroforestry systems in Nepal

    Directory of Open Access Journals (Sweden)

    Santosh Kumar Rana


    Full Text Available Himalayan alder species are proven to be very useful in traditional as well as contemporary agroforestry practice. These nitrogen-fixing trees are also useful in the land restoration. Therefore, understanding the distribution of Himalayan alder and the potential zone for plantation is meaningful in the agroforestry sector. Suitable climatic zones of Alnus spp. were modelled in MaxEnt software using a subset of least correlated bioclimatic variables for current conditions (1950–2000, topographic variables (DEM derived and Landuse Landcover (LULC data. We generated several models and selected the best model against random models using ANOVA and t-test. The environmental variables that best explained the current distribution of the species were identified and used to project into the future. For future projections, ensemble scenarios of climate change projection derived from the results of 19 Earth System Models (ESM were used. Our model revealed that the most favorable conditions for Alnus nepalensis are in central Nepal in the moist north-west facing slope, whereas for Alnus nitida they are in western Nepal. The major climatic factor that contributes to Alnus species distribution in Nepal appears to be precipitation during the warmest quarter for A. nepalensis and precipitation during the driest quarter for A. nitida. Future projections revealed changes in the probability distribution of these species, as well as where they need conservation and where they can be planted. Also, our model predicts that the distribution of Alnus spp. in hilly regions will remain unchanged, and therefore may represent sites that can be used to revitalize traditional agroforestry systems and extract source material for land restoration.

  5. Chemical Composition and Biological Activities of Trans-Himalayan Alga Spirogyra porticalis (Muell.) Cleve (United States)

    Kumar, Jatinder; Dhar, Priyanka; Tayade, Amol B.; Gupta, Damodar; Chaurasia, Om P.; Upreti, Dalip K.; Toppo, Kiran; Arora, Rajesh; Suseela, M. R.; Srivastava, Ravi B.


    The freshwater alga Spirogyra porticalis (Muell.) Cleve, a filamentous charophyte, collected from the Indian trans-Himalayan cold desert, was identified on the basis of morpho-anatomical characters. Extracts of this alga were made using solvents of varying polarity viz. n-hexane, acetonitrile, methanol and water. The antioxidant capacities and phenolic profile of the extracts were estimated. The methanol extract showing highest antioxidant capacity and rich phenolic attributes was further investigated and phytochemical profiling was conducted by gas chromatography-mass spectrometry (GC/MS) hyphenated technique. The cytotoxic activity of methanol extract was evaluated on human hepatocellular carcinoma HepG2 and colon carcinoma RKO cell lines. The anti-hypoxic effect of methanol extract of the alga was tested on in vivo animal system to confirm its potential to ameliorate oxidative stress. The antioxidant assays viz. ferric reducing antioxidant power (FRAP), 2,2'-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), 1,1-diphenyl-2-picrylhydrazyl (DPPH) and nitric oxide (NO) radical scavenging capacities, β-carotene-linoleic acid bleaching property and lipid peroxidation exhibited analogous results, wherein the algal extracts showed significantly high antioxidant potential. The extracts were also found to possess high content of total proanthocyanidin, flavonoid and polyphenol. GC/MS analysis revealed the presence of thirteen chemotypes in the methanol extract representing different phytochemical groups like fatty acid esters, sterols, unsaturated alcohols, alkynes etc. with substantial phyto-pharmaceutical importance. The methanol extract was observed to possess anticancer activity as revealed from studies on HepG2 and RKO cell lines. In the present study, S. porticalis methanol extract also provided protection from hypoxia-induced oxidative stress and accelerated the onset of adaptative changes in rats during exposure to hypobaric hypoxia. The

  6. A Three-Year Experience of Medical Thoracoscopy at A Tertiary Care Center of Himalayan Region

    Directory of Open Access Journals (Sweden)

    Rakhee Sodhi


    Full Text Available Introduction: Medical thoracoscopy is a minimally invasive procedure for diagnosing and treating pleural diseases. Despite its proven role in diagnostic and therapeutic purposes, it is infrequently used, which could be because of cost of equipment and lack of training. We analyzed our initial 3 years record of thoracoscopy at Himalayan Institute of Medical Sciences, a tertiary care center in Himalayan region of north India. Materials and Methods: This cross-sectional study was to analyze our experience of medical thoracoscopy which was started in Jan 2011 at our center. All patients who underwent thoracoscopy during the period between Jan 2011 to Dec 2013 were included in the study. Thoracoscopy was performed for diagnosis of undiagnosed pleural effusions. Clinical, radiological, cytological & histopathological data of the patients were collected prospectively and analysed. Results: The diagnostic yield for a pleuroscopic pleural biopsy in our study was 87.23% (41/47. Malignancy was diagnosed histopathologically in 70.2% (33/47 patients (both primary & metastatic pleural carcinoma and tuberculosis in 10.6% (5/47. There was no mortality related to procedure. Only three patients had minor complications like subcutaneous emphysema which was mild and resolved by second post-procedure day. Pain at intercostal drain site was observed in some patients. Conclusion: Thoracoscopy is an easy outpatient procedure and an excellent diagnostic tool for pleural effusion of uncertain etiology. It has low complication rate even in settings where the procedure is just started. It should be included in the armamentarium of tools for management of pleural effusion.

  7. Species composition and community structure of subtropical forest stands in western himalayan foothills of kashmir

    International Nuclear Information System (INIS)

    Shaheen, H.; Malik, N. M.; Dar, M. E. U. I.


    Lesser Himalayan subtropical forests have unique species composition due to diverse climatic and topographic factors which create numerous microhabitats. Phytosociological characteristics, structural attributes and biological spectrum of plant communities in the forests of Himalayan foothills in Kashmir were analyzed. A total of 65 species belonging to 26 plant families were recorded constituting 6 plant communities. Average value of diversity recorded for the communities was 2.44; species richness 4.01; whereas evenness was found to be 0.48. The species data indicated random distribution of species with a hump shaped diversity pattern directly correlated with increasing altitude. Themeda anathera was the dominant species with an importance value percentage of 14.7 percentage followed by Pinus roxburghii (9.6 percentage), Mallotus philippenensis (5.2 percentage), Malvastrum coromandelianum (5.1 percentage), Acacia modesta (5 percentage), Olea ferruginea (3.8 percentage) and Oxalis corniculata (3.2 percentage). Vegetation was dominated by Therophytes (30 percentage) and megaphanerophytes (23.3) with dominant leaf spectrum as leptophylls (31.6 percentage). Thirty seven percent plants had medicinal values followed by 31 percentage having fodder values where as 12 percentage used as fuel. Principal component analyses and cluster analyses revealed the association of dominant species with specific sites due to prevailing environmental conditions. The distribution of species in ordination diagrams indicated a continuous change in species composition along the altitudinal gradient. Key stone tree species were subject to immense tree felling resulting in deteriorating changes in forest structure. Visual indicators showed over grazing at all the studied sites evident from the dominance of unpalatable species. Local forest stands demand immediate attention of policy makers as well as forest management so that local diversity and floristic richness could be conserved and

  8. Pre-Himalayan tectono-magmatic imprints in the Darjeeling-Sikkim Himalaya (DSH) constrained by 40Ar/39Ar dating of muscovite (United States)

    Acharyya, Subhrangsu K.; Ghosh, Subhajit; Mandal, Nibir; Bose, Santanu; Pande, Kanchan


    The Lower Lesser Himalayan Sequence (L-LHS) in Darjeeling-Sikkim Himalaya (DSH) displays intensely deformed, low-grade meta-sedimentary rocks, frequently intervened by granite intrusives of varied scales. The principal motivation of our present study is to constrain the timing of this granitic event. Using 40Ar/39Ar geochronology, we dated muscovite from pegmatites emplaced along the earliest fabric in the low grade Daling phyllite, and obtained ∼1850 Ma Ar-Ar muscovite cooling age, which is broadly coeval with crystallization ages of Lingtse granite protolith (e.g., 1800-1850 Ma U-Pb zircon ages) reported from the L-LHS. We present here field observations to show the imprints (tectonic fabrics) of multiple ductile deformation episodes in the LHS terrain. The earliest penetrative fabric, axial planar to N-S trending reclined folds, suggest a regional tectonic event in the DSH prior to the active phase of Indo-Asia collision. Based on the age of granitic bodies and their structural correlation with the earliest fabric, we propose that the L-LHS as a distinct convergent tectono-magmatic belt, delineating the northern margin of Indian craton in the framework of the ∼1850 Ma Columbia supercontinent assembly.

  9. Yews (Taxus) along the Hindu Kush-Himalayan region: exploring the ethnopharmacological relevance among communities of Mongol and Caucasian origins. (United States)

    Poudel, Ram C; Gao, Lian-Ming; Möller, Michael; Baral, Sushim R; Uprety, Yadav; Liu, Jie; Li, De-Zhu


    Three species of yews Taxus contorta Griff., Taxus mairei (Lemée & Lév.) S.Y. Hu ex T.S. Liu and Taxus wallichiana Zucc. distributed in the Hindu Kush-Himalayan (HKH) region have been commercially exploited in recent decades to extract an anticancer chemotherapeutic drug 'Taxol'. Additionally, indigenous people of this region are using yews for several other purposes including gastro-intestinal disorders, respiratory problems, skeletal system disorders, and as edible fruit, fodder, fish poison, traditional veterinary medicine, among others. The study was designed to document and evaluate knowledge concerning uses of yews among indigenous communities of Mongol and Caucasian origins. Ethnobotanical knowledge from 10 major ethnic/caste groups of Mongol and Caucasian origins in the Nepal Himalayas was documented in 2010 and 2011 from 27 sites covering the extant distribution range of the three species of Taxus. A total of 72 key informants (60 men, 12 women), recommended by the majority of people in informal group discussions at each study site, were interviewed to collect information on the importance of yews. This study reports multidimensional uses of yews commonly practiced by different indigenous communities of Nepal and compared those with published uses along the HKH region. The key informants cited a total 45 uses under 21 categories. A greater use diversity and high consensus value for use types were recorded for medicinal uses (gastro-intestinal ailments, cough and cold, skeleto-muscular system problem and others medicinal importance) followed by fruit consumption, household tools, agriculture implements and timber. A decline of yew populations and associated traditional knowledge among the younger generations of indigenous people was found. The present study shows a strong agreement of ethnobotanical knowledge on yews between communities of Mongols and Caucasian origins. Our findings further revealed the potential for additional therapeutic applications in

  10. Using exhumation histories to constrain Main Himalayan Thrust geometry and seismic hazard in the western Nepal Himalaya (United States)

    Harvey, J. E.; Burbank, D.


    The Himalaya of western Nepal present a challenge to conventional understanding of the geometry and behavior of the Main Himalayan Thrust (MHT), a major seismogenic structure which accommodates 2 cm/yr of Indo-Asian convergence. Slip along a steeper ramp in the MHT drives long-term uplift of the Greater Himalaya along >1000 km of the central range front, resulting in a conspicuous physiographic transition known as PT2. This physiographic break is seemingly absent in western Nepal, which suggests a structural geometry and/or kinematic history distinct from areas along strike. This anomaly must be investigated to clarify how seismic hazard may differ from better-understood areas along strike. The importance of this work is heightened by the recent and catastrophic Gorkha earthquake in 2015. We present a suite of 7 relief transects comprising a mix of apatite and zircon U-Th/He and muscovite Ar-Ar cooling ages. These transects were collected across the more gradual mountain front in western Nepal in an effort to clarify where uplift and exhumation have been focused over the past 10 Ma. We invert these cooling ages using the thermo-kinematic model Pecube in order to constrain exhumation histories that best fit the measured cooling ages. Results confirm that MHT geometry and kinematic history in western Nepal are far more complex than in better-studied areas along strike. Exhumation rates in the along-strike projection of PT2 are slow ( 0.1-0.2 km/Myr) compared with rates 50 km toward the hinterland ( 1.0-1.5 km/Myr), suggesting that exhumation has been more rapid in this more northerly position for the past several Ma. Although a range of kinematic scenarios could explain the anomalous cooling histories, it is likely that a recently active midcrustal ramp in the MHT sits beneath this more northerly position. If the 2015 Gorkha earthquake initiated near the up-dip end of the MHT ramp in central Nepal, it is conceivable that similarly hazardous earthquakes could trigger

  11. Waste management in Greater Vancouver

    Energy Technology Data Exchange (ETDEWEB)

    Carrusca, K. [Greater Vancouver Regional District, Burnaby, BC (Canada); Richter, R. [Montenay Inc., Vancouver, BC (Canada)]|[Veolia Environmental Services, Vancouver, BC (Canada)


    An outline of the Greater Vancouver Regional District (GVRD) waste-to-energy program was presented. The GVRD has an annual budget for solid waste management of $90 million. Energy recovery revenues from solid waste currently exceed $10 million. Over 1,660,00 tonnes of GVRD waste is recycled, and another 280,000 tonnes is converted from waste to energy. The GVRD waste-to-energy facility combines state-of-the-art combustion and air pollution control, and has processed over 5 million tonnes of municipal solid waste since it opened in 1988. Its central location minimizes haul distance, and it was originally sited to utilize steam through sales to a recycle paper mill. The facility has won several awards, including the Solid Waste Association of North America award for best facility in 1990. The facility focuses on continual improvement, and has installed a carbon injection system; an ammonia injection system; a flyash stabilization system; and heat capacity upgrades in addition to conducting continuous waste composition studies. Continuous air emissions monitoring is also conducted at the plant, which produces a very small percentage of the total air emissions in metropolitan Vancouver. The GVRD is now seeking options for the management of a further 500,000 tonnes per year of solid waste, and has received 23 submissions from a range of waste energy technologies which are now being evaluated. It was concluded that waste-to-energy plants can be located in densely populated metropolitan areas and provide a local disposal solution as well as a source of renewable energy. Other GVRD waste reduction policies were also reviewed. refs., tabs., figs.

  12. Application of artificial neural networks in hydrological modeling: A case study of runoff simulation of a Himalayan glacier basin (United States)

    Buch, A. M.; Narain, A.; Pandey, P. C.


    The simulation of runoff from a Himalayan Glacier basin using an Artificial Neural Network (ANN) is presented. The performance of the ANN model is found to be superior to the Energy Balance Model and the Multiple Regression model. The RMS Error is used as the figure of merit for judging the performance of the three models, and the RMS Error for the ANN model is the latest of the three models. The ANN is faster in learning and exhibits excellent system generalization characteristics.

  13. Timing and nature of Holocene glacier advances at the northwestern end of the Himalayan-Tibetan orogen (United States)

    Saha, Sourav; Owen, Lewis A.; Orr, Elizabeth N.; Caffee, Marc W.


    Holocene glacial chronostratigraphies are developed for four glaciated valleys at the northwestern end of the Himalayan-Tibetan orogen using geomorphic mapping and cosmogenic 10Be surface exposure dating. The study areas include the Hamtah valley in the Lahul Himalaya, and the Karzok, Lato and upper Stok valleys in Zanskar. Five local glacial stages are dated to ∼10.4, ∼6.1-3.3, ∼2.1-0.9, ∼0.7-0.4, and ∼0.3-0.2 ka based on 49 new moraine boulder ages. Large age dispersions are evident for each of the local glacial stages. This is especially the case for ∼6.1-3.3 and ∼2.1-0.9 ka, which is likely a result of prior and/or incomplete exposures in very young moraine boulders. An additional compilation of 187 published 10Be moraine boulder ages help define seven Himalayan Holocene regional glacial stages (HHs) for the northwestern end of the Himalayan-Tibetan orogen. These HHs date to ∼10.9-9.3, ∼8.2-7.4, ∼6.9-4.3, ∼4.5-2.8, ∼2.7-1.8, ∼1.8-0.9, and forced northerly migration of the Intertropical Convergence Zone and enhanced summer monsoon. The timing of the majority of HHs during mid- and late Holocene corresponds well with the North Atlantic cooling that is likely teleconnected via mid-latitude westerlies, particularly during ∼8 ka and after ∼5 ka. These chronostratigraphies suggest that Holocene glaciation in the northwestern part of the Himalayan-Tibetan orogen is largely influenced by long-term orbital forcing amplified by large-scale migration of the Earth's thermal equator and the associated hemispheric oceanic-atmospheric systems.

  14. Conservation implications for the Himalayan wolf Canis (lupus) himalayensis based on observations of packs and home sites in Nepal


    Werhahn, G; Kusi, N; Sillero-Zubiri, C; Macdonald, DW


    We provide insights into pack composition and den site parameters of the Himalayan wolf Canis (lupus) himalayensis based on observations of free-ranging wolves in three study areas in Nepal. We combine this with a social survey of the local Buddhist communities regarding human–carnivore conflict, to draw inferences for conservation practice in the Nepalese Himalayas. We recorded eight wolf packs (with an average composition of two adults and three pups), and found five home sites in high-alti...

  15. Determination of GMPE functional form for an active region with limited strong motion data: application to the Himalayan region (United States)

    Bajaj, Ketan; Anbazhagan, P.


    Advancement in the seismic networks results in formulation of different functional forms for developing any new ground motion prediction equation (GMPE) for a region. Till date, various guidelines and tools are available for selecting a suitable GMPE for any seismic study area. However, these methods are efficient in quantifying the GMPE but not for determining a proper functional form and capturing the epistemic uncertainty associated with selection of GMPE. In this study, the compatibility of the recent available functional forms for the active region is tested for distance and magnitude scaling. Analysis is carried out by determining the residuals using the recorded and the predicted spectral acceleration values at different periods. Mixed effect regressions are performed on the calculated residuals for determining the intra- and interevent residuals. Additionally, spatial correlation is used in mixed effect regression by changing its likelihood function. Distance scaling and magnitude scaling are respectively examined by studying the trends of intraevent residuals with distance and the trend of the event term with magnitude. Further, these trends are statistically studied for a respective functional form of a ground motion. Additionally, genetic algorithm and Monte Carlo method are used respectively for calculating the hinge point and standard error for magnitude and distance scaling for a newly determined functional form. The whole procedure is applied and tested for the available strong motion data for the Himalayan region. The functional form used for testing are five Himalayan GMPEs, five GMPEs developed under NGA-West 2 project, two from Pan-European, and one from Japan region. It is observed that bilinear functional form with magnitude and distance hinged at 6.5 M w and 300 km respectively is suitable for the Himalayan region. Finally, a new regression coefficient for peak ground acceleration for a suitable functional form that governs the attenuation

  16. Surface area changes of Himalayan ponds as a proxy of hydrological climate-driven fluctuations (United States)

    Salerno, Franco; Thakuri, Sudeep; Guyennon, Nicolas; Viviano, Gaetano; Tartari, Gianni


    The meteorological measurements at high-elevations of the Himalayan range are scarce due to the harsh conditions of these environments which limit the suitable maintenance of weather stations. As a consequence, the meager knowledge on how the climate is changed in the last decades at Himalayan high-elevations sets a serious limit upon the interpretation of relationships between causes and recent observed effects on the cryosphere. Although the glaciers masses reduction in Himalaya is currently sufficiently well described, how changes in climate drivers (precipitation and temperature) have influenced the melting and shrinkage processes are less clear. Consequently, the uncertainty related to the recent past amplifies when future forecasts are done, both for climate and impacts. In this context, a substantial body of research has already demonstrated the high sensitivity of lakes and ponds to climate. Some climate-related signals are highly visible and easily measurable in lakes. For example, climate-driven fluctuations in lake surface area have been observed in many remote sites. On interior Tibetan Plateau the lake growth since the late 1990s is mainly attributed to increased regional precipitation and weakened evaporation. Differently, other authors attribute at the observed increases of lake surfaces at the enhanced glacier melting. In our opinion these divergences found in literature are due to the type of glacial lakes considered in the study and in particular their relationship with glaciers. In general, in Himalaya three types of glacial lakes can be distinguished: (i) lakes that are not directly connected with glaciers, but that may have a glacier located in their basin (unconnected glacial lakes); (ii) supraglacial lakes, which develop on the surface of the glacier downstream; or (iii) proglacial lakes, which are moraine-dammed lakes that are in contact with the glacier front. Some of these lakes store large quantities of water and are susceptible to GLOFs

  17. Podophyllum hexandrum (Himalayan mayapple) extract provides radioprotection by modulating the expression of proteins associated with apoptosis. (United States)

    Kumar, Raj; Singh, Pankaj Kumar; Sharma, Ashok; Prasad, Jagdish; Sagar, Ravinder; Singh, Surender; Arora, Rajesh; Sharma, Rakesh Kumar


    Podophyllum hexandrum Royale (Himalayan mayapple), a high-altitude Himalayan plant, has been shown to provide over 80% whole-body radioprotection in mice. To investigate the radioprotective potential of P. hexandrum at the molecular level, expression patterns of various proteins associated with apoptosis were studied in the spleen of male Swiss albino strain A mice by immunoblotting. Treatment with P. hexandrum [200 mg/kg of body weight; an ethanolic 50% (w/v) extract delivered intraperitoneally] 2 h before irradiation resulted in MAPKAP (mitogen-activated protein kinase-activated protein) kinase-2 activation along with HSF-1 (heat-shock transcription factor-1), leading to up-regulation of HSP-70 (heat-shock protein-70) as compared with sham-irradiated (10 Gy) mice. Strong inhibition of AIF (apoptosis-inducing factor) expression was observed in the mice treated with P. hexandrum 2 h before irradiation as compared with the sham-irradiated group. Inhibition in the translocation of free NF-kappaB (nuclear factor kappaB) from cytoplasm to nucleus was observed upon P. hexandrum pretreatment 2 h before irradiation when compared with radiation-treated mice. P. hexandrum pre-treatment (2 h before irradiation) resulted in inhibition of NF-kappaB translocation, and the expression of tumour suppressor protein p53 was observed to be down-regulated as compared with sham-irradiated control. An increase in the expression of proteins responsible for cell proliferation [Bcl-2 (B-cell chronic lymphocytic lymphoma 2), Ras-GAP (Ras-GTPase-activating protein) and PCNA (proliferating cell nuclear antigen)] was observed in the P. hexandrum-pretreated irradiated mice as compared with sham-irradiated controls. Caspase 3 activation resulted PARP [poly(ADP-ribose) DNA polymerase] cleavage, and DNA degradation was strongly inhibited in the mice treated with P. hexandrm (+/-irradiation) as compared with the mice treated with radiation (+/-heat shock). The present study thus clearly

  18. Land use impact on soil quality in eastern Himalayan region of India. (United States)

    Singh, A K; Bordoloi, L J; Kumar, Manoj; Hazarika, S; Parmar, Brajendra


    Quantitative assessment of soil quality is required to determine the sustainability of land uses in terms of environmental quality and plant productivity. Our objective was to identify the most appropriate soil quality indicators and to evaluate the impact of six most prevalent land use types (natural forestland, cultivated lowland, cultivated upland terrace, shifting cultivation, plantation land, and grassland) on soil quality in eastern Himalayan region of India. We collected 120 soil samples (20 cm depth) and analyzed them for 29 physical, chemical, and biological soil attributes. For selection of soil quality indicators, principal component analysis (PCA) was performed on the measured attributes, which provided four principal components (PC) with eigenvalues >1 and explaining at least 5% of the variance in dataset. The four PCs together explained 92.6% of the total variance. Based on rotated factor loadings of soil attributes, selected indicators were: soil organic carbon (SOC) from PC-1, exchangeable Al from PC-2, silt content from PC-3, and available P and Mn from PC-4. Indicators were transformed into scores (linear scoring method) and soil quality index (SQI) was determined, on a scale of 0-1, using the weighting factors obtained from PCA. SQI rating was the highest for the least-disturbed sites, i.e., natural forestland (0.93) and grassland (0.87), and the lowest for the most intensively cultivated site, i.e., cultivated upland terrace (0.44). Ratings for the other land uses were shifting cultivation (0.60) > cultivated low land (0.57) > plantation land (0.54). Overall contribution (in percent) of the indicators in determination of SQI was in the order: SOC (58%) > exch. Al (17.1%) > available P (8.9%) > available Mn (8.2%) > silt content (7.8%). Results of this study suggest SOC and exch. Al as the two most powerful indicators of soil quality in study area. Thus, organic C and soil acidity management holds the key to improve soil

  19. Seasonality of Precipitation over Himalayan Watersheds in CORDEX South Asia and their Driving CMIP5 Experiments

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    Shabeh ul Hasson


    Full Text Available Since the Coupled Model Intercomparison Project Phase 5 (CMIP5 experiments exhibit limited skill in reproducing the statistical properties of prevailing precipitation regimes over the major Himalayan watersheds (Indus, Ganges, Brahmaputra and Mekong, this study evaluates the anticipated added skill of their dynamically refined simulations performed under the framework of Coordinated Regional Climate Downscaling Experiments for South Asia (CX-SA. For this, the fidelity of eight CX-SA experiments against their six driving CMIP5 experiments is assessed for the historical period (1971–2005 in terms of time-dependent statistical properties (onset/retreat timings and rapid fractional accumulation—RFA of the dominant summer monsoonal precipitation regime (MPR. Further, a self-defining seasonality index (SI, which is a product of precipitation and the distance of its actual distribution relative to its uniform distribution (relative entropy—RE, has been computed for MPR, westerly precipitation regime (WPR and annual precipitation. The time evolution of precipitation, RE and SI has also been analyzed. Results suggest that CX-SA experiments simulate even higher wet biases than their driving CMIP5 experiments over all study basins, mainly due to higher wet biases simulated over the Himalayas and Tibetan Plateau. Most of the CX-SA experiments suggest unrealistic timings of the monsoon onset that are far earlier than their driving CMIP5 experiments for all basins. Generally, CX-SA experiments feature higher underestimation of RFA slope, RE and SI, distancing their driving CMIP5 experiments farther from observations. Interestingly, regardless of the diverse skill of CMIP5 experiments, their fine scale CX-SA experiments exhibit quite a similar skill when downscaled by the same regional climate model (RCM, indicating RCM’s ability to considerably alter the driving datasets. These findings emphasize on improving the fidelity of simulated precipitation

  20. Mineralogy of Nicobar Fan turbidites (IODP Leg 362): Himalayan provenance and diagenetic control. (United States)

    Limonta, M.; Garzanti, E.; Ando, S.; Carter, A.; Milliken, K. L.; Pickering, K. T.


    In this study we use quantitative petrographic and heavy-mineral data on silt-sized and sand-sized sediments from the Nicobar Fan turbiditic depositional system to unravel their provenance and discriminate between pre-depositional and post-depositional processes controlling sediment mineralogy. Eighteen samples from the two drill sites U1480 e U1481, collected down to a depth of 1400 m during International Ocean Discovery Expedition 362, were selected for analysis. A complete section of the sedimentary section overlying oceanic basaltic basement was recovered at the U1480 drill site, whereas the U1481 drill site, located 35 km to the southeast, focused on the deeper interval of the sedimentary section overlying oceanic basement. Here we illustrate the compositional trends observed throughout the recovered succession, and compare heavy-mineral suites characterizing sediments drilled at the two U1480 and U1481 sites to check for potential differences in sediment provenance over a relatively short distance in trench settings. Diagenetic control with increasing burial depth was also specifically investigated. In Pleistocene sediments at depths of a few tens of meters only, rich heavy-mineral assemblages include mainly hornblende, epidote, and garnet, associated with apatite, clinopyroxene, tourmaline, sillimanite, kyanite, zircon, titanite, and rare staurolite and rutile, testifying to long-distance provenance from the Himalayan range via the Ganga-Brahmaputra fluvio-deltaic-turbiditic system. Heavy-mineral concentration shows a progressive decrease with burial depth, pointing to selective diagenetic dissolution of less durable detrital minerals. Clinopyroxene becomes rare below 400 m depth and was not recorded below 500 m depth, where amphibole decreases notably in relative abundance. More durable heavy minerals, including zircon, tourmaline, apatite, garnet and epidote, consequently tend to be relatively enriched with increasing age and burial depth. Petrographic and

  1. Thermal modeling and parametric studies of a greenhouse fish pond in the Central Himalayan Region

    International Nuclear Information System (INIS)

    Sarkar, Bikash; Tiwari, G.N.


    This study describes the thermal modeling and its validation of greenhouse fish pond systems. Numerical computations have been performed for a typical day in the month of June, 2005, for the climatic condition of Champawat in the Central Himalayan Region. The energy balance equations have been written considering the effects of conduction, convection, radiation, evaporation and ventilation. The governing equations are numerically solved with Matlab 7.0 software to predict the water temperature. A parametric study has also been performed to find the effects of various parameters, namely the number of air changes per hour, the transmissivity (τ) and the isothermal mass and height of the greenhouse. It is observed that there is no significant effect in the parametric studies on water temperature due to the larger isothermal mass. The model has been validated with experimental data. On an average, the even span passive greenhouse fish pond can increase the inside temperature 4.14 deg. C higher than the temperature of an outdoor pond. Statistical analysis shows that the predicted and experimental values of water temperature exhibited fair agreement with a coefficient of correlation r = 0.90 and root mean square percent deviation e = 1.67%

  2. Seismic vulnerability of the Himalayan half-dressed rubble stone masonry structures, experimental and analytical studies

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    N. Ahmad


    Full Text Available Half-Dressed rubble stone (DS masonry structures as found in the Himalayan region are investigated using experimental and analytical studies. The experimental study included a shake table test on a one-third scaled structural model, a representative of DS masonry structure employed for public critical facilities, e.g. school buildings, offices, health care units, etc. The aim of the experimental study was to understand the damage mechanism of the model, develop damage scale towards deformation-based assessment and retrieve the lateral force-deformation response of the model besides its elastic dynamic properties, i.e. fundamental vibration period and elastic damping. The analytical study included fragility analysis of building prototypes using a fully probabilistic nonlinear dynamic method. The prototypes are designed as SDOF systems assigned with lateral, force-deformation constitutive law (obtained experimentally. Uncertainties in the constitutive law, i.e. lateral stiffness, strength and deformation limits, are considered through random Monte Carlo simulation. Fifty prototype buildings are analyzed using a suite of ten natural accelerograms and an incremental dynamic analysis technique. Fragility and vulnerability functions are derived for the damageability assessment of structures, economic loss and casualty estimation during an earthquake given the ground shaking intensity, essential within the context of risk assessment of existing stock aiming towards risk mitigation and disaster risk reduction.

  3. The Himalayan hydro machine and space transmission power systems - An Asian dream of 21st century (United States)

    Admoddie, M.

    The advantages and disadvantages for the development of hydroelectric power are assessed for the Himalayan Rectangle, an area rising 1500 km north of a baseline between Karachi and Mandalay. This area has the potential for possessing one of the world's greatest power production capabilities. Among the disadvantages cited are the political instability and religious fundamentalism of the area, the bankrupt governments, environmental degradation, and inefficient power and irrigation systems. The advantages include the millions of talented and enterprising people in the region awaiting higher opportunities who are eager to improve their families' living standards and the large untapped hydropower resources. The concepts for hydropower development are discussed and go beyond the technologies of power and water. They include catchment ecodevelopment strategies with massive afforestation plans, setting up plans to strengthen village-level institutions to manage local natural biomass and water assets, the conversion of this regional hydropower potential into a subcontinental power system, and the exporting of power and the development of an interregional and international power grid by 2030, when both oil and local ecosystems would be dangerously depleted.

  4. Natural resources assessment and their utilization: analyses from a Himalayan state. (United States)

    Uniyal, Sanjay Kr; Singh, Rakesh D


    The present paper quantifies and reviews the natural resource use in the Himalayan state of Himachal Pradesh (HP). Twenty-five percent of the geographical area of HP is under forests and harbour ca. 3,400 plant species. The available bioresources not only support the livelihood of nearly 6 million people but also fulfill the forage requirement of 5.2 million livestock. Thus, dependence on bioresources is manifold. Based on field surveys to different localities of HP and analyses of published information, two types of resource use patterns have been identified. One, the direct use of forest resources which is represented by extraction of timber, fuelwood and fodder; and the second represents indirect resource use from the forest that is represented by activities related to agriculture, tourism and industry. Amongst the direct resource use, annual timber requirement of the local people works out to be 310,063 m(3). On the other hand, annual fuelwood and fodder requirement of local people is to the tune of 3,646,348.8 and 10,294,116.5 tons, respectively. Extraction of fodder therefore appears to be one of the main reasons for forest degradation in HP as opposed to timber and fuelwood extraction. However, compared to direct resource use, indirect resource use and pressures have far more pronounced effect on the forests. Of the indirect pressures, shifts in agriculture patterns and increased tourism seem to be the most prominent.

  5. Pharmacognostic Studies on Two Himalayan Species of Traditional Medicinal Value: Allium wallichii and Allium stracheyi

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    Umeshkumar TIWARI


    Full Text Available The present research was aimed as a pharmacognostic study of whole plants of Allium wallichii and Allium stracheyi, both of which are very important traditional medicinal plants of North-West Himalayas. This study was carried out in terms of macroscopic and microscopic analyses and standard histochemical methods were followed for detecting starch, calcium oxalate, tannins, total lipids and alkaloids. Allium wallichi can be distinguished from A. stracheyi by possessing polyarch roots, mycorrhizal fungi in the outer cortical cells and triangular leaf midrib. The present study is the first to describe the pharmacognosy in terms of anatomical and histochemical features of these two Himalayan Allium species. Although they are listed in Ayurvedic database, the API so far has not given an account on these two species and hence this work is of high importance. Also, the herbal industries, researchers and traditional medicine can now use the distinguishing characters of these species listed in the current paper, while specifically acquiring them from local markets without any confusion.

  6. Characterization of Microsatellite Loci in the Himalayan Lichen Fungus Lobaria pindarensis (Lobariaceae

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    Shiva Devkota


    Full Text Available Premise of the study: Microsatellite loci were developed for the rare, Himalayan, endemic haploid lichen fungus, Lobaria pindarensis, to study its population subdivision and the species' response to forest disturbance and fragmentation. Methods and Results: We developed 18 polymorphic microsatellite markers using 454 pyrosequencing data and assessed them in 109 individuals. The number of alleles per locus ranged from three to 11 with an average of 6.9. Nei's unbiased gene diversity, averaged over loci, ranged from 0.514 to 0.685 in the three populations studied. The cross-amplification success with related species (L. chinensis, L. gyrophorica, L. isidiophora, L. orientalis, L. pulmonaria, L. spathulata, and Lobaria sp. was generally high and decreased with decreasing relationship to L. pindarensis. Conclusions: The new markers will allow the study of genetic diversity and differentiation within L. pindarensis across its distribution. Moreover, they will enable us to study the effects of forest management on the genetic population structure of this tree-colonizing lichen and to carry out population genetic studies of related species in East Asia.

  7. HIMALA: climate impacts on glaciers, snow, and hydrology in the Himalayan region (United States)

    Brown, Molly Elizabeth; Ouyang, Hua; Habib, Shahid; Shrestha, Basanta; Shrestha, Mandira; Panday, Prajjwal; Tzortziou, Maria; Policelli, Frederick; Artan, Guleid; Giriraj, Amarnath; Bajracharya, Sagar R.; Racoviteanu, Adina


    Glaciers are the largest reservoir of freshwater on Earth, supporting one third of the world's population. The Himalaya possess one of the largest resources of snow and ice, which act as a freshwater reservoir for more than 1.3 billion people. This article describes a new project called HIMALA, which focuses on utilizing satellite-based products for better understanding of hydrological processes of the river basins of the region. With support from the US Agency for International Development (USAID), the International Centre for Integrated Mountain Development (ICIMOD), together with its partners and member countries, has been working on the application of satellite-based rainfall estimates for flood prediction. The US National Aeronautics and Space Administration (NASA) partners are working with ICIMOD to incorporate snowmelt and glacier melt into a widely used hydrological model. Thus, through improved modeling of the contribution of snow and ice meltwater to river flow in the region, the HIMALA project will improve the ability of ICIMOD and its partners to understand the impact of weather and climate on floods, droughts, and other water- and climate-induced natural hazards in the Himalayan region in Afghanistan, Bangladesh, Bhutan, China, India, Myanmar, Nepal, and Pakistan.

  8. Soil-gas radon/helium surveys in some neotectonic areas of NW Himalayan foothills, India

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    S. Mahajan


    Full Text Available The present research is aimed at accessing the relationship between variation in the soil gases radon (222Rn and helium (4He and recently developed fissures and other neotectonic features in Nurpur and Nadha areas of the NW Himalayas, India. Two soil-gas surveys were conducted on/near known faults to reconfirm their position using soil gas technique and to check their present activity. During these surveys, soil-gas samples were collected along traverses crossing the observed structures. The data analysis reveals that the concentrations of radon and helium along the Dehar lineament and the longitudinal profile (Profile D are very high compared to any other thrust/lineament of the Nurpur area. The Nadha area shows high values of radon and helium concentrations along/near the Himalayan Frontal Fault (HFF as compared to the adjoining areas. This indicates the presence of some buried fault/fault zone running parallel to the HFF, not exposed to the surface and not delineated by satellite data but is geochemically active and might be tectonically active too. Hence, soil helium and radon gas patterns have been combined with morphological and geological observations to supply useful constraints for deformation of tectonic environments.

  9. HIMALA: Climate Impacts on Glaciers, Snow, and Hydrology in the Himalayan Region (United States)

    Brown, Molly Elizabeth; Ouyang, Hua; Habib, Shahid; Shrestha, Basanta; Shrestha, Mandira; Panday, Prajjwal; Tzortziou, Maria; Policelli, Frederick; Artan, Guleid; Giriraj, Amarnath; hide


    Glaciers are the largest reservoir of freshwater on Earth, supporting one third of the world s population. The Himalaya possess one of the largest resources of snow and ice, which act as a freshwater reservoir for more than 1.3 billion people. This article describes a new project called HIMALA, which focuses on utilizing satellite-based products for better understanding of hydrological processes of the river basins of the region. With support from the US Agency for International Development (USAID), the International Centre for Integrated Mountain Development (ICIMOD), together with its partners and member countries, has been working on the application of satellite-based rainfall estimates for flood prediction. The US National Aeronautics and Space Administration (NASA) partners are working with ICIMOD to incorporate snowmelt and glacier melt into a widely used hydrological model. Thus, through improved modeling of the contribution of snow and ice meltwater to river flow in the region, the HIMALA project will improve the ability of ICIMOD and its partners to understand the impact of weather and climate on floods, droughts, and other water- and climate-induced natural hazards in the Himalayan region in Afghanistan, Bangladesh, Bhutan, China, India, Myanmar, Nepal, and Pakistan.

  10. Landslide Hazard Assessment near Kedarnath Temple in Himalayan region considering cloudburst tragedy in 2013 (United States)

    Ansari, T. A.; Singh, T. N., Sr.


    The world famous Shri Kedarnath Temple in Uttarakhand state of India is located in the western extremity of the young and dynamically active Central Himalaya. As Indian plate is moving towards Eurasian plate which has steep slopes, highly variable altitudes and uncertain climatic conditions. Due to high seismic activity Himalayan rock mass is highly fractured, shattered and inherently weakness pose threat for landslide. On 16th and 17th June 2013, was witness an extreme climatic events of century in the history of the region, the high intensity rainfall, (> 400mm) caused number of landslide which have adverse economic and societal impacts, including the potential for heavy loss of human and widespread devastation of natural resources, infrastructures. The study region is at high altitude around 3583 meters, which is affected from impact of glacial melt due to climate change and future increase in rainfall subjected to high level uncertainty of landslides. Aerial and field survey has been done of the region and most vulnerable landslide locations of hill slope and road cut slope are studied for future prospect of safety. SLIDE 6.0, PHASE27 (numerical software) for slope stability, geomechanical profile of rock and kinematics analysis to know the type of failures. Rock quality tunneling index (Q), Geological strength (GSI), Slope mass Rating (SMR) and factor of safety were determined to know the slope instability. Our finding provides an important aspect for future safety as provide the information for landslide warning system and engineering countermeasures.

  11. Conceptual model development for landscape management in the mountains of the Indian Himalayan region: an approach for sustainable socio-ecological development

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    Sunil Nautiyal


    Full Text Available This study aims at presenting a conceptual model for landscape management in the Himalayan region of India, using quantitative/mathematical approach. Keeping in view the requirement, (based on fifteen years empirical field work in the Himalayan region and as well as literature survey the MODAM (Multiple Objectives Decision Support Tools for Landscape Management model along with linear programming approach was adopted with a view to presenting additional methodological perspectives on interdisciplinary landscape research. The work has stemmed out from the original research contribution, which tries to integrate interdisciplinary research planning with landscape management related research in the Himalayan region. This biodiversity hotspot has relatively high complexity in terms of sustainable socioeconomic development vis a vis conservation and management of the resources. The concepts and insights presented in this article will provide the basis for a discussion, on decisionmaking issues among multidisciplinary experts with regard to sustainable socioecological development within complex environments.

  12. Inverted temperature sequences: role of deformation partitioning (United States)

    Grujic, D.; Ashley, K. T.; Coble, M. A.; Coutand, I.; Kellett, D.; Whynot, N.


    The inverted metamorphism associated with the Main Central thrust zone in the Himalaya has been historically attributed to a number of tectonic processes. Here we show that there is actually a composite peak and deformation temperature sequence that formed in succession via different tectonic processes. The deformation partitioning seems to the have played a key role, and the magnitude of each process has varied along strike of the orogen. To explain the formation of the inverted metamorphic sequence across the Lesser Himalayan Sequence (LHS) in eastern Bhutan, we used Raman spectroscopy of carbonaceous material (RSCM) to determine the peak metamorphic temperatures and Ti-in-quartz thermobarometry to determine the deformation temperatures combined with thermochronology including published apatite and zircon U-Th/He and fission-track data and new 40Ar/39Ar dating of muscovite. The dataset was inverted using 3D-thermal-kinematic modeling to constrain the ranges of geological parameters such as fault geometry and slip rates, location and rates of localized basal accretion, and thermal properties of the crust. RSCM results indicate that there are two peak temperature sequences separated by a major thrust within the LHS. The internal temperature sequence shows an inverted peak temperature gradient of 12 °C/km; in the external (southern) sequence, the peak temperatures are constant across the structural sequence. Thermo-kinematic modeling suggest that the thermochronologic and thermobarometric data are compatible with a two-stage scenario: an Early-Middle Miocene phase of fast overthrusting of a hot hanging wall over a downgoing footwall and inversion of the synkinematic isotherms, followed by the formation of the external duplex developed by dominant underthrusting and basal accretion. To reconcile our observations with the experimental data, we suggest that pervasive ductile deformation within the upper LHS and along the Main Central thrust zone at its top stopped at

  13. Bacterial community of cushion plant Thylacospermum ceaspitosum on elevational gradient in the Himalayan cold desert. (United States)

    Řeháková, Klára; Chroňáková, Alica; Krištůfek, Václav; Kuchtová, Barbora; Čapková, Kateřina; Scharfen, Josef; Čapek, Petr; Doležal, Jiří


    heterotrophic bacteria in Himalayan soil.

  14. Clinical Profile of Scrub Typhus in Pregnancy in Sub-Himalayan Region. (United States)

    Kumar, Ritesh; Thakur, Surinder; Bhawani, Rajesh; Kanga, Anil; Ranjan, Asha


    Scrub typhus is rare in pregnancy, but it has now become an important cause of febrile illness in pregnancy in sub-Himalayan region of India. Only a few case reports have been published so far, and they show adverse maternal and fetal outcomes. No consensus has been reached till now regarding treatment. All the pregnant patients irrespective of period of gestation admitted with febrile illness with positive IgM ELISA for scrub typhus with or without eschar were included. The clinical profile was observed using a detailed history of symptoms, travel, recreation, agricultural activities, treatment record prior to admission, and a detailed examination, and the treatment outcome was noted. Fever workup including cultures, CXR, CSF analysis, serology for scrub was done. IgM scrub typhus was done by kit method manufactured by InBios Intertational, Inc. We observed in total 14 pregnant patients out of which eight were in the the second trimester and six were in the third trimester. The clinical features of the disease observed for pregnant females were the same as for nonpregnant females. There was no difference in the severity of scrub typhus between pregnant and nonpregnant women. No mortality was found in these patients. On follow-up, they had normal peripartum and postpartum periods. All were treated with azithromycin 500 mg once a day for 5 days. Although rare, scrub typhus should be considered in differential diagnosis of fever in pregnant patients especially in scrub season. Azithromycin should be the drug of choice in pregnancy as it has no adverse effect on fetus and pregnancy outcome.

  15. Predictability of Western Himalayan river flow: melt seasonal inflow into Bhakra Reservoir in northern India

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    I. Pal


    Full Text Available Snowmelt-dominated streamflow of the Western Himalayan rivers is an important water resource during the dry pre-monsoon spring months to meet the irrigation and hydropower needs in northern India. Here we study the seasonal prediction of melt-dominated total inflow into the Bhakra Dam in northern India based on statistical relationships with meteorological variables during the preceding winter. Total inflow into the Bhakra Dam includes the Satluj River flow together with a flow diversion from its tributary, the Beas River. Both are tributaries of the Indus River that originate from the Western Himalayas, which is an under-studied region. Average measured winter snow volume at the upper-elevation stations and corresponding lower-elevation rainfall and temperature of the Satluj River basin were considered as empirical predictors. Akaike information criteria (AIC and Bayesian information criteria (BIC were used to select the best subset of inputs from all the possible combinations of predictors for a multiple linear regression framework. To test for potential issues arising due to multicollinearity of the predictor variables, cross-validated prediction skills of the best subset were also compared with the prediction skills of principal component regression (PCR and partial least squares regression (PLSR techniques, which yielded broadly similar results. As a whole, the forecasts of the melt season at the end of winter and as the melt season commences were shown to have potential skill for guiding the development of stochastic optimization models to manage the trade-off between irrigation and hydropower releases versus flood control during the annual fill cycle of the Bhakra Reservoir, a major energy and irrigation source in the region.

  16. Interesting insights into instability of slopes and rock fall in the morphodynamic Himalayan terrane (United States)

    Singh, T. N.; Vishal, V.; Pradhan, S. P.


    Himalayan mountain ranges are tectonically and seismically very active and experience many disastrous events with time due to slope failure. Frequent failures of rock cut slopes cause obstruction in traffic and often lead to fatalities. In recent years, the number of tragedies has increased when associated with regional phenomena such at the Kedarnath tragedy of 2013 and the Gorkha earthquake of 2015. The influence of such phenomena on the stability of slopes along important national highways and key settlement areas only raise the risk to lives and property. We conducted a multi-approach investigation for some key slopes along the National Highway 58 in Uttarakhand Himalaya, India. A very detailed field work was conducted to identify the unstable slopes and those with some history of failure. The pertinent geomechanical characteristics of the representative rock samples were determined in the laboratory. Based on the structural data, kinematic analysis was carried out. Finally the slopes were simulated using FDM based simulator, Flac/Slope for analysing the health of the slopes and Rockfall 4.0 to investigate the phenomenon of rockfall along the Highway. It was found that few slopes were weak due to the inherent weak rock materials while few slopes made up of high strength rocks were effectively weak due to prone-to-failure orientation of the joints. Quantification of bounce-height of rock blocks during fall, their energy, velocity and displacement along the slope was also done. Using 3-D simulations, few critically-stable slopes that appear to be stable, were identified. Little ground movement could be capable of triggering a large scale failure in the area. Slopes in the studied region are under threat to failure and need immediate proper planning using the suggested remedial measures.

  17. Improvement of downscaled rainfall and temperature across generations over the Western Himalayan region of India (United States)

    Das, L.; Dutta, M.; Akhter, J.; Meher, J. K.


    It is a challenging task to create station level (local scale) climate change information over the mountainous locations of Western Himalayan Region (WHR) in India because of limited data availability and poor data quality. In the present study, missing values of station data were handled through Multiple Imputation Chained Equation (MICE) technique. Finally 22 numbers of rain gauge and 16 number of temperature station data having continuous record during 1901­2005 and 1969­2009 period respectively were considered as reference stations for developing downscaled rainfall and temperature time series from five commonly available GCMs in the IPCC's different generation assessment reports namely 2nd, 3rd, 4th and 5th hereafter known as SAR, TAR, AR4 and AR5 respectively. Downscaled models were developed using the combined data from the ERA-interim reanalysis and GCMs historical runs (in spite of forcing were not identical in different generation) as predictor and station level rainfall and temperature as predictands. Station level downscaled rainfall and temperature time series were constructed for five GCMs available in each generation. Regional averaged downscaled time series comprising of all stations was prepared for each model and generation and the downscaled results were compared with observed time series. Finally an Overall Model Improvement Index (OMII) was developed using the downscaling results, which was used to investigate the model improvement across generations as well as the improvement of downscaling results obtained from the Empirical Statistical Downscaling (ESD) methods. In case of temperature, models have improved from SAR to AR5 over the study area. In all most all the GCMs TAR is showing worst performance over the WHR by considering the different statistical indices used in this study. In case of precipitation, no model has shown gradual improvement from SAR to AR5 both for interpolated and downscaled values.

  18. Estimating stream discharge from a Himalayan Glacier using coupled satellite sensor data (United States)

    Child, S. F.; Stearns, L. A.; van der Veen, C. J.; Haritashya, U. K.; Tarpanelli, A.


    The 4th IPCC report highlighted our limited understanding of Himalayan glacier behavior and contribution to the region's hydrology. Seasonal snow and glacier melt in the Himalayas are important sources of water, but estimates greatly differ about the actual contribution of melted glacier ice to stream discharge. A more comprehensive understanding of the contribution of glaciers to stream discharge is needed because streams being fed by glaciers affect the livelihoods of a large part of the world's population. Most of the streams in the Himalayas are unmonitored because in situ measurements are logistically difficult and costly. This necessitates the use of remote sensing platforms to obtain estimates of river discharge for validating hydrological models. In this study, we estimate stream discharge using cost-effective methods via repeat satellite imagery from Landsat-8 and SENTINEL-1A sensors. The methodology is based on previous studies, which show that ratio values from optical satellite bands correlate well with measured stream discharge. While similar, our methodology relies on significantly higher resolution imagery (30 m) and utilizes bands that are in the blue and near-infrared spectrum as opposed to previous studies using 250 m resolution imagery and spectral bands only in the near-infrared. Higher resolution imagery is necessary for streams where the source is a glacier's terminus because the width of the stream is often only 10s of meters. We validate our methodology using two rivers in the state of Kansas, where stream gauges are plentiful. We then apply our method to the Bhagirathi River, in the North-Central Himalayas, which is fed by the Gangotri Glacier and has a well monitored stream gauge. The analysis will later be used to couple river discharge and glacier flow and mass balance through an integrated hydrologic model in the Bhagirathi Basin.

  19. Soil erosion assessment of a Himalayan river basin using TRMM data (United States)

    Pandey, A.; Mishra, S. K.; Gautam, A. K.; Kumar, D.


    In this study, an attempt has been made to assess the soil erosion of a Himalayan river basin, the Karnali basin, Nepal, using rainfall erosivity (R-factor) derived from satellite-based rainfall estimates (TRMM-3B42 V7). Average annual sediment yield was estimated using the well-known Universal Soil Loss Equation (USLE). The eight-year annual average rainfall erosivity factor (R) for the Karnali River basin was found to be 2620.84 MJ mm ha-1 h-1 year-1. Using intensity-erosivity relationships and eight years of the TRMM daily rainfall dataset (1998-2005), average annual soil erosion was also estimated for Karnali River basin. The minimum and maximum values of the rainfall erosivity factor were 1108.7 and 4868.49 MJ mm ha-1 h-1 year-1, respectively, during the assessment period. The average annual soil loss of the Karnali River basin was found to be 38.17 t ha-1 year-1. Finally, the basin area was categorized according to the following scale of erosion severity classes: Slight (0 to 5 t ha-1 year-1), Moderate (5 to 10 t ha-1 year-1), High (10 to 20 t ha-1 year-1), Very High (20 to 40 t ha-1 year-1), Severe (40 to 80 t ha-1 year-1) and Very Severe (>80 t ha-1 year-1). About 30.86% of the river basin area was found to be in the slight erosion class. The areas covered by the moderate, high, very high, severe and very severe erosion potential zones were 13.09%, 6.36%, 11.09%, 22.02% and 16.64% respectively. The study revealed that approximately 69% of the Karnali River basin needs immediate attention from a soil conservation point of view.

  20. High-Resolution Monitoring of Himalayan Glacier Dynamics Using Unmanned Aerial Vehicles (United States)

    Immerzeel, W.; Kraaijenbrink, P. D. A.; Shea, J.; Shrestha, A. B.; Pellicciotti, F.; Bierkens, M. F.; de Jong, S. M.


    Himalayan glacier tongues are commonly debris covered and play an important role in modulating the glacier response to climate . However, they remain relatively unstudied because of the inaccessibility of the terrain and the difficulties in field work caused by the thick debris mantles. Observations of debris-covered glaciers are therefore limited to point locations and airborne remote sensing may bridge the gap between scarce, point field observations and coarse resolution space-borne remote sensing. In this study we deploy an Unmanned Airborne Vehicle (UAV) on two debris covered glaciers in the Nepalese Himalayas: the Lirung and Langtang glacier during four field campaigns in 2013 and 2014. Based on stereo-imaging and the structure for motion algorithm we derive highly detailed ortho-mosaics and digital elevation models (DEMs), which we geometrically correct using differential GPS observations collected in the field. Based on DEM differencing and manual feature tracking we derive the mass loss and the surface velocity of the glacier at a high spatial resolution and accuracy. We also assess spatiotemporal changes in supra-glacial lakes and ice cliffs based on the imagery. On average, mass loss is limited and the surface velocity is very small. However, the spatial variability of melt rates is very high, and ice cliffs and supra-glacial ponds show mass losses that can be an order of magnitude higher than the average. We suggest that future research should focus on the interaction between supra-glacial ponds, ice cliffs and englacial hydrology to further understand the dynamics of debris-covered glaciers. Finally, we conclude that UAV deployment has large potential in glaciology and it represents a substantial advancement over methods currently applied in studying glacier surface features.

  1. Crustal Structure and Evolution of the Eastern Himalayan Plate Boundary System, Northeast India (United States)

    Mitra, S.; Priestley, K. F.; Borah, Kajaljyoti; Gaur, V. K.


    We use data from 24 broadband seismographs located south of the Eastern Himalayan plate boundary system to investigate the crustal structure beneath Northeast India. P wave receiver function analysis reveals felsic continental crust beneath the Brahmaputra Valley, Shillong Plateau and Mikir Hills, and mafic thinned passive margin transitional crust (basement layer) beneath the Bengal Basin. Within the continental crust, the central Shillong Plateau and Mikir Hills have the thinnest crust (30 ± 2 km) with similar velocity structure, suggesting a unified origin and uplift history. North of the plateau and Mikir Hills the crustal thickness increases sharply by 8-10 km and is modeled by ˜30∘ north dipping Moho flexure. South of the plateau, across the ˜1 km topographic relief of the Dawki Fault, the crustal thickness increases abruptly by 12-13 km and is modeled by downfaulting of the plateau crust, overlain by 13-14 km thick sedimentary layer/rocks of the Bengal Basin. Farther south, beneath central Bengal Basin, the basement layer is thinner (20-22 km) and has higher Vs (˜4.1 km s-1) indicating a transitional crystalline crust, overlain by the thickest sedimentary layer/rocks (18-20 km). Our models suggest that the uplift of the Shillong Plateau occurred by thrust faulting on the reactivated Dawki Fault, a continent margin paleorift fault, and subsequent back thrusting on the south dipping Oldham Fault, in response to flexural loading of the Eastern Himalaya. Our estimated Dawki Fault offset combined with timing of surface uplift of the plateau reveals a reasonable match between long-term uplift and convergence rate across the Dawki Fault with present-day GPS velocities.

  2. K/Ar hornblende ages from the higher Himalaya: implications for India-Asia collision and Himalayan metamorphosis

    International Nuclear Information System (INIS)

    Sorkhabi, R.B.; Stump, A.K.; Jain, A.K.; Manickavasagam, R.M.; Nishimura Susumu


    Two amphibolite samples from the Higher Himalayan Crystalline (HHC) belt from the Suru Valley, Zanskar, have yielded Eocene K/Ar hornblende cooling ages between 40 and 45 Ma, thus indicating much older peak metamorphic conditions in northern parts of the Indian Plate. These ages are in conformity with almost identical ages from metamorphic complexes across the Nanga Parbat syntaxis in Pakistan and reveal a 65 to 70-Ma collision phase of the Indian indentor in the NW-Himalaya. (author). 21 refs., 2 figs

  3. Forest fires in Himalayan region during 2016 - Aerosol load and smoke plume heights detection by multi sensor observations (United States)

    Kumar, S.; Dumka, U. C.


    The forest fires are common events over the Central Himalayan region during the pre-monsoon season (March - June) of every year. Forest fire plays a crucial role in governing the vegetation structure, ecosystem, climate change as well as in atmospheric chemistry. In regional and global scales, the combustion of forest and grassland vegetation releases large volumes of smoke, aerosols, and other chemically active species that significantly influence Earth's radiative budget and atmospheric chemistry, impacting air quality and risks to human health. During the year 2016, massive forest fires have been recorded over the Central Himalayan region of Uttarakhand which continues for several weeks. To study this event we used the multi-satellite observations of aerosols and pollutants during pre-fire, fire and post-fire period over the central Himalayan region. The data used in this study are active fire count and aerosol optical depth (AOD) from MODerate-resolution Imaging Spectroradiometer (MODIS), aerosol index and gases pollutants from Ozone Monitoring Instrument (OMI), along with vertical profiles of aerosols and smoke plume height information from Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO). The result shows that the mean fire counts were maximum in April. The daily average AOD value shows an increasing trend during the fire events. The mean value of AOD before the massive fire (25 April), during the fire (30 April) and post fire (5 May) periods are 0.3, 1.2 and 0.6 respectively. We find an increasing trend of total columnar NO2 over the Uttarakhand region during the massive fire event. Space-born Lidar (CALIPSO) retrievals show the extent of smoke plume heights beyond the planetary boundary layer up to 6 km during the peak burning day (April 30). The HYSPLIT air mass forward trajectory shows the long-range transportation of smoke plumes. The results of the present study provide valuable information for addressing smoke plume and

  4. Thidiazuron: A potent cytokinin for efficient plant regeneration in Himalayan poplar (Populus ciliata Wall. using leaf explants

    Directory of Open Access Journals (Sweden)

    Gaurav Aggarwal


    Full Text Available Populus species are important resource for certain branches of industry and have special roles for scientific study on biological and agricultural systems. The present investigation was undertaken with an objective of enhancing the frequency of plant regeneration in Himalayan poplar (Populus ciliata Wall.. The effect of Thiadizuron (TDZ alone and in combination with adenine and α-Naphthalene acetic acid (NAA were studied on the regeneration potential of leaf explants. A high efficiency of shoot regeneration was observed in leaf (80.00% explants on MS basal medium supplemented with 0.024 mg/l TDZ and 79.7 mg/l adenine. Elongation and multiplication of shoots were obtained on Murashige and Skoog (MS basal medium, containing 0.5 mg/l 6. Benzyl aminopurine (BAP + 0.2mg/l Indole 3-acetic acid (IAA + 0.3 mg/l Gibberellic acid (GA3. High frequency root regeneration from in vitro developed shoots was observed on MS basal medium supplemented with 0.10 mg/l Indole 3-butyric acid(IBA. Maximum of the in vitro rooted plantlets were well accomplished to the mixture of sand: soil (1:1 and exhibited similar morphology with the field plants. A high efficiency plant regeneration protocol has been developedfrom leaf explants in Himalayan poplar (Populus ciliata Wall..

  5. Use of Satellite and In Situ Reflectance Data for Lake Water Color Characterization in the Everest Himalayan Region

    Directory of Open Access Journals (Sweden)

    Erica Matta


    Full Text Available This study applied remote sensing techniques to the study of water color in Himalayan glacial lakes as a proxy of suspended solid load. In situ measurements gathered in 5 lakes in October 2014 during satellite data acquisition enabled the characterization of water reflectance and clarity and supported image processing. Field data analysis led to a distinction between 3 water colors and a consequent lake water color classification on a regional scale from Landsat-8 data previously corrected for atmospheric and adjacency effects. Several morphometric parameters (lake size and shape, distance between lake and glacier were also computed for the lakes thus classified. The results showed spatial and temporal variations in lake water color, suggestive of relationships between glacier shrinkage and the presence of brighter and more turbid water. A finer-scale analysis of the spatial variability of water reflectance on Chola Lake (based on GeoEye-1 data captured on 18 October 2014 showed the contribution of water component absorption from the inflow. Overall, the findings support further research to monitor Himalayan lakes using both Landsat-8 and Sentinel-2 (with its improved resolutions.

  6. Quantifying present and future glacier melt-water contribution to runoff in a central Himalayan river basin

    Directory of Open Access Journals (Sweden)

    M. Prasch


    Full Text Available Water supply of most lowland cultures heavily depends on rain and melt water from the upstream mountains. Especially melt-water release of alpine mountain ranges is usually attributed a pivotal role for the water supply of large downstream regions. Water scarcity is assumed as consequence of glacier shrinkage and possible disappearance due to global climate change (GCC, in particular for large parts of Central and Southeast Asia. In this paper, the application and validation of a coupled modeling approach with regional climate model (RCM outputs and a process-oriented glacier and hydrological model is presented for the central Himalayan Lhasa River basin despite scarce data availability. Current and possible future contributions of ice melt to runoff along the river network are spatially explicitly shown. Its role among the other water balance components is presented. Although glaciers have retreated and will continue to retreat according to the chosen climate scenarios, water availability is and will be primarily determined by monsoon precipitation and snowmelt. Ice melt from glaciers is and will be a minor runoff component in summer monsoon-dominated Himalayan river basins.

  7. The food habits of the Himalayan Brown Bear Ursus arctos (Mammalia: Carnivora: Ursidae in Kugti Wildlife Sanctuary, Himachal Pradesh, India

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    Bipan C. Rathore


    Full Text Available We documented the food habits of the Himalayan Brown Bear Ursus arctos in Kugti Wildlife Sanctuary, Himachal Pradesh, India, between 2002 and 2004 using scat analysis (n=222, direct observation (n=57, and feeding sign observations (n=57.  We concluded that Himalayan Brown Bears lead a predominantly herbivorous life style as plant matter occurred more frequently in scats (79% than animal matter (21%.  During summer, monsoon and fall, the frequency occurrence of plant matter was 72.2%, 77% and 91% respectively.  During early summer, brown bears foraged primarily on green vegetation such as Rumex nepalensis followed by Chaerophyllum reflexum.  Based on direct feeding observations, brown bears were observed to be feeding on 29 species of plants including agricultural crops and one fungi, Morchella esculenta.  The overuse by livestock, decline in local herbs and excessive extraction of high altitudinal medicinal plants in this habitat may pose a threat to the fragmented brown bear population. 

  8. Sequence assembly

    DEFF Research Database (Denmark)

    Scheibye-Alsing, Karsten; Hoffmann, S.; Frankel, Annett Maria


    Despite the rapidly increasing number of sequenced and re-sequenced genomes, many issues regarding the computational assembly of large-scale sequencing data have remain unresolved. Computational assembly is crucial in large genome projects as well for the evolving high-throughput technologies and...... in genomic DNA, highly expressed genes and alternative transcripts in EST sequences. We summarize existing comparisons of different assemblers and provide a detailed descriptions and directions for download of assembly programs at:

  9. Genome Sequencing

    DEFF Research Database (Denmark)

    Sato, Shusei; Andersen, Stig Uggerhøj


    The current Lotus japonicus reference genome sequence is based on a hybrid assembly of Sanger TAC/BAC, Sanger shotgun and Illumina shotgun sequencing data generated from the Miyakojima-MG20 accession. It covers nearly all expressed L. japonicus genes and has been annotated mainly based on transcr......The current Lotus japonicus reference genome sequence is based on a hybrid assembly of Sanger TAC/BAC, Sanger shotgun and Illumina shotgun sequencing data generated from the Miyakojima-MG20 accession. It covers nearly all expressed L. japonicus genes and has been annotated mainly based...

  10. Greater trochanteric pain syndrome diagnosis and treatment. (United States)

    Mallow, Michael; Nazarian, Levon N


    Lateral hip pain, or greater trochanteric pain syndrome, is a commonly seen condition; in this article, the relevant anatomy, epidemiology, and evaluation strategies of greater trochanteric pain syndrome are reviewed. Specific attention is focused on imaging of this syndrome and treatment techniques, including ultrasound-guided interventions. Copyright © 2014 Elsevier Inc. All rights reserved.

  11. Value addition of wild apricot fruits grown in North-West Himalayan regions-a review. (United States)

    Sharma, Rakesh; Gupta, Anil; Abrol, G S; Joshi, V K


    Wild apricot (Prunus armeniaca L.) commonly known as chulli is a potential fruit widely distributed in North-West Himalayan regions of the world. The fruits are good source of carbohydrates, vitamins, minerals besides having attractive colour and typical flavour. Unlike table purpose varieties of apricots like New Castle, the fruits of wild apricot are unsuitable for fresh consumption because of its high acid and low sugar content. However, the fruits are traditionally utilized for open sun drying, pulping to prepare different products such as jams, chutney and naturally fermented and distilled liquor. But, scientific literature on processing and value addition of wild apricot is scanty. Preparation of jam with 25 % wild apricot +75 % apple showed maximum score for organoleptic characteristics due to better taste and colour. Osmotic dehydration has been found as a suitable method for drying of wild type acidic apricots. A good quality sauce using wild apricot pulp and tomato pulp in the ratio of 1:1 has been prepared, while chutney of good acceptability prepared from wild apricot pulp (100 %) has also been documented. Preparation of apricot-soy protein enriched products like apricot-soya leather, toffee and fruit bars has been reported, which are reported to meet the protein requirements of adult and children as per the recommendations of ICMR. Besides these processed products, preparation of alcoholic beverages like wine, vermouth and brandy from wild apricot fruits has also been reported by various researchers. Further, after utilization of pulp for preparation of value added products, the stones left over have been successfully utilized for oil extraction which has medicinal and cosmetic value. The traditional method of oil extraction has been reported to be unhygienic and result in low oil yield with poor quality, whereas improved mechanical method of oil extraction has been found to produce good quality oil. The apricot kernel oil and press cake have

  12. Himalayan Lake- and River-Impacting Landslides and Ice Avalanches: Some So Deadly, Some No Problem (United States)

    Kargel, J. S.; Karki, A.; Haritashya, U. K.; Shugar, D. H.; Harrison, S.


    the same area. Factors for landslide triggering of glacial lake outburst floods (GLOFs) include some of the same factors, but the mass/energy input rate into the lake, the lake's shape and length, and moraine dam properties are also important in GLOF triggering. Himalayan examples will illustrate some hazard factors.

  13. Radical scavenging, prolyl endopeptidase inhibitory, and antimicrobial potential of a cultured Himalayan lichen Cetrelia olivetorum. (United States)

    Savale, Swapnil Anil; Pol, Chaitrali Satish; Khare, Roshni; Verma, Neeraj; Gaikwad, Subhash; Mandal, Bapi; Behera, Bhaskar C


    antioxidant, PEPI, and antimicrobial potential. The present study indicates therapeutic potential of Himalayan lichen C. olivetorum against neurodegenerative diseases owing to its radical scavenging, PEPI, and antimicrobial activities. Further, the result encourages its commercial exploitation through mass culture for production of its bioactive components and their use in pharmaceutical and nutraceutical industries.

  14. Evidence of Himalayan uplift as seen in Neogene records of Indian monsoon variability from ODP Hole 722B, NW Arabian Sea (United States)

    Muthusamy, Prakasam; Gupta, Anil K.; Saini, Naresh K.


    The Indian monsoon is one of the most interesting climatic features on Earth impacting most populous countries of South and East Asia. It is marked by seasonal reversals of wind direction with southwesterly winds in summer (June-September) and northeasterly winds in winter (December-February). The monsoon not only impacts socioeconomic conditions of Asia but also brings important changes in fauna and flora, ocean upwelling and primary productivity in the Arabian Sea. The Himalaya has undergone several phases of rapid uplift and exhumation since the early Miocene which led to major intensification of the Indian monsoon. The monsoon is driven by the thermal contrast between land and sea, and is intimately linked with the latitudinal movement of the Inter-Tropical Convergence Zone (ITCZ). The effect of Indian monsoon variability and the Himalayan uplift can be seen in numerous proxy records across the region. In this study we discussed about the Indian monsoon intensification and the Himalayan uplift since the early Miocene based on multi proxy records such as planktic foraminiferal relative abundances (Globigerina bulloides, Globigerinita glutinata and mixed layer species), total organic carbon (TOC), CaCO3 and elemental data from ODP Hole 722B (2028 mbsf), northwestern Arabian Sea. The TOC, CaCO3 and elemental variations of the ODP Hole 722B suggest multi phase of monsoonal intensification and Himalayan uplifts. Our results suggest that in the early Miocene (23.03 Ma) to ~15Ma, the wind strength and productivity were low. A major change is observed at ~15 Ma, during which time numerous proxies show abrupt changes. TOC, CaCO3 and Elemental analyses results reveal that a major change in the productivity, wind strength and chemical weathering starts around 15 Ma and extends up to 10 Ma. This suggests that a major Himalayan uplift occurred during ~15-10 Ma that drove Indian monsoon intensification. A similar change is also observed during 5 to 1 Ma. These long

  15. West-directed thrusting south of the eastern Himalayan syntaxis indicates clockwise crustal flow at the indenter corner during the India-Asia collision (United States)

    Haproff, Peter J.; Zuza, Andrew V.; Yin, An


    Whether continental deformation is accommodated by microplate motion or continuum flow is a central issue regarding the nature of Cenozoic deformation surrounding the eastern Himalayan syntaxis. The microplate model predicts southeastward extrusion of rigid blocks along widely-spaced strike-slip faults, whereas the crustal-flow model requires clockwise crustal rotation along closely-spaced, semi-circular right-slip faults around the eastern Himalayan syntaxis. Although global positioning system (GPS) data support the crustal-flow model, the surface velocity field provides no information on the evolution of the India-Asia orogenic system at million-year scales. In this work, we present the results of systematic geologic mapping across the northernmost segment of the Indo-Burma Ranges, located directly southeast of the eastern Himalayan syntaxis. Early research inferred the area to have experienced either right-slip faulting accommodating northward indentation of India or thrusting due to the eastward continuation of the Himalayan orogen in the Cenozoic. Our mapping supports the presence of dip-slip thrust faults, rather than strike-slip faults. Specifically, the northern Indo-Burma Ranges exposes south- to west-directed ductile thrust shear zones in the hinterland and brittle fault zones in the foreland. The trends of ductile stretching lineations within thrust shear zones and thrust sheets rotate clockwise from the northeast direction in the northern part of the study area to the east direction in the southern part of the study area. This clockwise deflection pattern of lineations around the eastern Himalayan syntaxis mirrors the clockwise crustal-rotation pattern as suggested by the crustal-flow model and contemporary GPS velocity field. However, our finding is inconsistent with discrete strike-slip deformation in the area and the microplate model.

  16. 10Be systematics in the Tsangpo-Brahmaputra catchment: the cosmogenic nuclide legacy of the eastern Himalayan syntaxis

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    M. Lupker


    Full Text Available The Tsangpo-Brahmaputra River drains the eastern part of the Himalayan range and flows from the Tibetan Plateau through the eastern Himalayan syntaxis downstream to the Indo-Gangetic floodplain and the Bay of Bengal. As such, it is a unique natural laboratory to study how denudation and sediment production processes are transferred to river detrital signals. In this study, we present a new 10Be data set to constrain denudation rates across the catchment and to quantify the impact of rapid erosion within the syntaxis region on cosmogenic nuclide budgets and signals. The measured 10Be denudation rates span around 2 orders of magnitude across individual catchments (ranging from 0.03 to > 4 mm yr−1 and sharply increase as the Tsangpo-Brahmaputra flows across the eastern Himalaya. The increase in denudation rates, however, occurs  ∼  150 km downstream of the Namche Barwa–Gyala Peri massif (NBGPm, an area which has been previously characterized by extremely high erosion and exhumation rates. We suggest that this downstream lag is mainly due to the physical abrasion of coarse-grained, low 10Be concentration, landslide material produced within the syntaxis that dilutes the upstream high-concentration 10Be flux from the Tibetan Plateau only after abrasion has transferred sediment to the studied sand fraction. A simple abrasion model produces typical lag distances of 50 to 150 km compatible with our observations. Abrasion effects reduce the spatial resolution over which denudation can be constrained in the eastern Himalayan syntaxis. In addition, we also highlight that denudation rate estimates are dependent on the sediment connectivity, storage, and quartz content of the upstream Tibetan Plateau part of the catchment, which tends to lead to an overestimation of downstream denudation rates. While no direct 10Be denudation measurements were made in the syntaxis, the dilution of the upstream 10Be signal, measured in Tsangpo

  17. Simultaneous bilateral isolated greater trochanter fracture

    Directory of Open Access Journals (Sweden)

    Maruti Kambali


    Full Text Available A 48-year-old woman sustained simultaneous isolated bilateral greater trochanteric fracture, following a road traffic accident. The patient presented to us 1 month after the injury. She presented with complaints of pain in the left hip and inability to walk. Roentgenograms revealed displaced comminuted bilateral greater trochanter fractures. The fracture of the left greater trochanter was reduced and fixed internally using the tension band wiring technique. The greater trochanter fracture on the right side was asymptomatic and was managed conservatively. The patient regained full range of motion and use of her hips after a postoperative follow-up of 6 months. Isolated fractures of the greater trochanter are unusual injuries. Because of their relative rarity and the unsettled controversy regarding their etiology and pathogenesis, several methods of treatment have been advocated. Furthermore, the reports of this particular type of injury are not plentiful and the average textbook coverage afforded to this entity is limited. In our study we discuss the mechanism of injury and the various treatment options available.

  18. Investigation of geothermal fields in himalayan range in pakistan using isotope and chemical techniques

    International Nuclear Information System (INIS)

    Ahmad, M.; Sheikh, M.R.; Akram, W.; Tasneem, M.A.; Iqbal, N.; Latif, Z.


    There are many geothermal sites in Himalayan belt of Pakistan having low to high temperatures(boiling water). Isotopes and geochemical techniques were applied to investigate the origin, subsurface history and reservoir temperatures of geothermal fields at Tatta Pani and Tato lying along Main Mantle Thrust, Murtazabad along Main Karakoram Thrust and Kotli in the area of overlapping thrusts: Punjal Thrust, Main Boundary Thrust and the Himalaya Frontal Thrust. Discharge of the springs varies from 30 to 2000 liters per minute with the surface temperature from 47.3 to 92 degree C. Two sets of water samples were collected from these fields. The samples were analyzed for various isotopes (O/sup 18/, H/sup 2/ and H/sup 3/ of water; C/sup 13/ of dissolved inorganic carbon; S/sup 34/ and O/sup 18/ of dissolved sulphates); and water chemistry. The thermal waters of the Northern Areas of Pakistan are generally neutral to slightly alkaline and have low dissolved contents. Sodium is the dominant cation in all the cases. In terms of anions, HCO/sub 3/ is dominating. Source of recharge is meteoric water (rains and/or snow-melt). The dominant process of cooling is conduction at Tatta Pani, Tato, and Murtazabad. Shallow groundwater is mixing with the thermal springs in different proportions at Murtazabad, while there is no mixing in the thermal waters of Tatta Pani and Tato. The equilibrium temperature of the thermal end-member at Murtazabad is in the range of 185- 225 degree C and the isochemical-mixing model based on the Na-K and quartz geothermometers estimates 227 degree C temperature. O/sup 18/ (SO/sub 4/-H/sub 2/O) geothermometer indicates equilibrium temperatures (before mixing) above I85 degree C. The dissolved silica vs. enthalpy plot suggests heat losses through conduction from the original temperature about 245 degree C. The reservoir temperatures of Tatta Pani (100-130 degree C) determined by the Na-K, K-Mg and quartz geothermometers are in good agreement. O/sup 18/ (SO

  19. Himalayan/Karakoram Disaster After Disaster: The Pain Will Not Be Ending Anytime Soon (United States)

    Kargel, J. S.; Leonard, G. J.


    Are recent natural disasters in the Himalaya/Karakoram partly human-caused? Will disasters diminish or increase in frequency? Natural disasters in this region are nothing new. Earthquakes, floods, landslides, avalanches, and debris flows have occurred in the Himalaya/Karakoram since the mountains first grew from the sea. Simply put, the Himalaya/Karakoram, being South Asia's 'water tower' and an active plate tectonic collision zone, must shed water and debris to the lowlands and the sea. When this activity occurs swiftly and with high intensity at or near human settlements, the results are often deadly. Remote sensing analysis of recent disasters coupled with demography, news accounts, and field studies indicate that there is a component of human responsibility. Two overarching human elements include (1) settlement and infrastructure encroachment into hazardous mountain areas and (2) aggravation of climate change. Both are substantially responsible--separately or together--for most of the recent tragedies. These conclusions provide the answer to when the disasters will end: not soon. Unfortunately, disasters will almost surely increase. Whether natural disasters have increased in frequency over the region's long historical record may be debated and must be researched. This expected link is a challenge to assess due to the stochastic nature of disasters and their triggering events (e.g., earthquakes and extreme weather events). While Himalayan tectonism, rock mechanics, glaciation, and climate are fundamental causes of the disasters, so are human land uses. Encroaching development into ever-hazardous zones is a paramount cause of much human tragedy. Climate change is harder to pin down specifically as a cause of some of these disasters, because some disasters are linked to rare extreme weather events and mass movements, which may be statistically but not individually attributable in part to climate change. Nevertheless, evidence supports a major role of climate

  20. Fault Slip and GPS Velocities Across the Shan Plateau Define a Curved Southwestward Crustal Motion Around the Eastern Himalayan Syntaxis (United States)

    Shi, Xuhua; Wang, Yu; Sieh, Kerry; Weldon, Ray; Feng, Lujia; Chan, Chung-Han; Liu-Zeng, Jing


    Characterizing the 700 km wide system of active faults on the Shan Plateau, southeast of the eastern Himalayan syntaxis, is critical to understanding the geodynamics and seismic hazard of the large region that straddles neighboring China, Myanmar, Thailand, Laos, and Vietnam. Here we evaluate the fault styles and slip rates over multi-timescales, reanalyze previously published short-term Global Positioning System (GPS) velocities, and evaluate slip-rate gradients to interpret the regional kinematics and geodynamics that drive the crustal motion. Relative to the Sunda plate, GPS velocities across the Shan Plateau define a broad arcuate tongue-like crustal motion with a progressively northwestward increase in sinistral shear over a distance of 700 km followed by a decrease over the final 100 km to the syntaxis. The cumulative GPS slip rate across the entire sinistral-slip fault system on the Shan Plateau is 12 mm/year. Our observations of the fault geometry, slip rates, and arcuate southwesterly directed tongue-like patterns of GPS velocities across the region suggest that the fault kinematics is characterized by a regional southwestward distributed shear across the Shan Plateau, compared to more block-like rotation and indentation north of the Red River fault. The fault geometry, kinematics, and regional GPS velocities are difficult to reconcile with regional bookshelf faulting between the Red River and Sagaing faults or localized lower crustal channel flows beneath this region. The crustal motion and fault kinematics can be driven by a combination of basal traction of a clockwise, southwestward asthenospheric flow around the eastern Himalayan syntaxis and gravitation or shear-driven indentation from north of the Shan Plateau.

  1. Spatial gradients in freshwater fish diversity, abundance and current pattern in the Himalayan region of Upper Ganges Basin, India

    Directory of Open Access Journals (Sweden)



    Full Text Available Pathak AK, Sarkar UK, Singh SP. 2014. Spatial gradients in freshwater fish diversity, abundance and current pattern in the Himalayan region of Upper Ganges Basin, India. Biodiversitas 15: 186-194.The present study describes the analysis and mapping of the different measurements of freshwater fish biodiversity of the Upper Ganges basin in the Himalayan region using spatial interpolation methods of Geographical Information System. The diversity, richness and abundance of fishes for each sampling location were determined and Kriging interpolation was applied on each fisheries measurement to predict and produce semivariogram. The semivariogarms produced were cross validated and reclassified. The reclassified maps for richness, abundance and diversity of fishes, occurrence of cold water threatened fish and abundance of important genera like Tor, Schziothorax and species were produced. The result of the Kriging produced good results and overall error in the estimation process was found significant. The cross validation of semovariograms also provided a better result with the observed data sets. Moreover, weighted overlay analysis of the reclassified raster maps of richness and abundance of fishes produced the classified raster map at different evaluation scale (0-10 qualitatively describing the gradient of species richness and abundance compositely. Similarly, the classified raster map at same evaluation scale qualitatively describing the gradient of species abundance and diversity compositely was produced and published. Further, basin wise analysis between Alaknanda/Pindar and Ganga1 sub basins showed 0.745 disparities at 0.745 distances in 2 dimensional spaces. The richness, diversity and abundance of threatened fishes among the different sampling locations were not significant (p = 0.9.

  2. Transforming the Lives of Mountain Women Through the Himalayan Nettle Value Chain: A Case Study From Darchula, Far West Nepal

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    Lipy Adhikari


    Full Text Available Naugad is a remote rural municipality in the mountains of far west Nepal with poor accessibility and limited economic opportunities, especially for women and marginalized communities. Promotion of the natural resource-based value chain for allo (the Himalayan nettle, Girardinia diversifolia was identified as an innovative livelihood strategy by the local community. Value chain development started in 2014. The project was designed to focus on women and include participation by the private sector. This paper analyzes the impact of the project, especially on women's lives, using primary and secondary data. A community-owned enterprise was established with private-sector support from the South Asian Association of Regional Cooperation's Business Association of Home Based Workers (SABAH Nepal. The enterprise now has 82 members (69 of them women, with 150 households benefiting directly and indirectly. SABAH Nepal provided training in sustainable harvesting and processing techniques and promotes the products in high-end international markets. A buyback guarantee scheme provides security to local artisans. The quality and range of allo products have increased markedly, as has the share in benefits for local people. Skills training and visits to trade fairs have helped women build their capacity and take a leading role in the value chain process. The community-owned enterprise members have earned up to NPR 4000 per month from sewing, more than the local rate for day labor and sufficient to cover general household expenses. More than 25 women entrepreneurs have started microbusinesses related to allo. Allo has become an important economic asset, transforming the lives of mountain women in this village area. The approach has potential for scaling up across the subtropical to temperate areas of the Himalayan region in Bhutan, China, India, Myanmar, and Nepal.

  3. Greater trochanteric fracture with occult intertrochanteric extension. (United States)

    Reiter, Michael; O'Brien, Seth D; Bui-Mansfield, Liem T; Alderete, Joseph


    Proximal femoral fractures are frequently encountered in the emergency department (ED). Prompt diagnosis is paramount as delay will exacerbate the already poor outcomes associated with these injuries. In cases where radiography is negative but clinical suspicion remains high, magnetic resonance imaging (MRI) is the study of choice as it has the capability to depict fractures which are occult on other imaging modalities. Awareness of a particular subset of proximal femoral fractures, namely greater trochanteric fractures, is vital for both radiologists and clinicians since it has been well documented that they invariably have an intertrochanteric component which may require surgical management. The detection of intertrochanteric or cervical extension of greater trochanteric fractures has been described utilizing MRI but is underestimated with both computed tomography (CT) and bone scan. Therefore, if MRI is unavailable or contraindicated, the diagnosis of an isolated greater trochanteric fracture should be met with caution. The importance of avoiding this potential pitfall is demonstrated in the following case of an elderly woman with hip pain and CT demonstrating an isolated greater trochanteric fracture who subsequently returned to the ED with a displaced intertrochanteric fracture.

  4. Butterfly valves: greater use in power plants

    International Nuclear Information System (INIS)

    McCoy, M.


    Improvements in butterfly valves, particularly in the areas of automatic control and leak tightness are described. The use of butterfly valves in nuclear power plants is discussed. These uses include service in component cooling, containment cooling, and containment isolation. The outlook for further improvements and greater uses is examined. (U.S.)

  5. Greater Somalia, the never-ending dream?

    DEFF Research Database (Denmark)

    Zoppi, Marco


    This paper provides an historical analysis of the concept of Greater Somalia, the nationalist project that advocates the political union of all Somali-speaking people, including those inhabiting areas in current Djibouti, Ethiopia and Kenya. The Somali territorial unification project of “lost...

  6. Utilization of wind energy in greater Hanover

    International Nuclear Information System (INIS)

    Sahling, U.


    Since the beginning of the Eighties, the association of communities of Greater Hanover has dealt intensively with energy and ecopolitical questions in the scope of regional planning. Renewable energy sources play a dominant role in this context. This brochure is the third contribution to the subject ''Energy policy and environmental protection''. Experts as well as possibly interested parties are addressed especially. For all 8 contributions contained, separate entries have been recorded in this database. (BWI) [de

  7. Small cities face greater impact from automation


    Frank, Morgan R.; Sun, Lijun; Cebrian, Manuel; Youn, Hyejin; Rahwan, Iyad


    The city has proven to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: How will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across U.S. urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content su...

  8. The Greater Sekhukhune-CAPABILITY outreach project. (United States)

    Gregersen, Nerine; Lampret, Julie; Lane, Tony; Christianson, Arnold


    The Greater Sekhukhune-CAPABILITY Outreach Project was undertaken in a rural district in Limpopo, South Africa, as part of the European Union-funded CAPABILITY programme to investigate approaches for capacity building for the translation of genetic knowledge into care and prevention of congenital disorders. Based on previous experience of a clinical genetic outreach programme in Limpopo, it aimed to initiate a district clinical genetic service in Greater Sekhukhune to gain knowledge and experience to assist in the implementation and development of medical genetic services in South Africa. Implementing the service in Greater Sekhukhune was impeded by a developing staff shortage in the province and pressure on the health service from the existing HIV/AIDS and TB epidemics. This situation underscores the need for health needs assessment for developing services for the care and prevention of congenital disorders in middle- and low-income countries. However, these impediments stimulated the pioneering of innovate ways to offer medical genetic services in these circumstances, including tele-teaching of nurses and doctors, using cellular phones to enhance clinical care and adapting and assessing the clinical utility of a laboratory test, QF-PCR, for use in the local circumstances.

  9. Operational technology for greater confinement disposal

    International Nuclear Information System (INIS)

    Dickman, P.T.; Vollmer, A.T.; Hunter, P.H.


    Procedures and methods for the design and operation of a greater confinement disposal facility using large-diameter boreholes are discussed. It is assumed that the facility would be located at an operating low-level waste disposal site and that only a small portion of the wastes received at the site would require greater confinement disposal. The document is organized into sections addressing: facility planning process; facility construction; waste loading and handling; radiological safety planning; operations procedures; and engineering cost studies. While primarily written for low-level waste management site operators and managers, a detailed economic assessment section is included that should assist planners in performing cost analyses. Economic assessments for both commercial and US government greater confinement disposal facilities are included. The estimated disposal costs range from $27 to $104 per cubic foot for a commercial facility and from $17 to $60 per cubic foot for a government facility. These costs are based on average site preparation, construction, and waste loading costs for both contact- and remote-handled wastes. 14 figures, 22 tables

  10. What can the Cretaceous-to-present latitude history of the Lhasa terrane tell us about plate-scale deformation in the Tibetan-Himalayan orogen? (Invited) (United States)

    Lippert, P. C.; Van Hinsbergen, D. J.; Dupont-Nivet, G.; Huang, W.


    collision of the Tibetan Himalayan microcontinent can account for the large amount of post-50 Ma convergence that is partitioned into Greater India. We suggest that Cordilleran-style tectonics were more important in constructing the Tibetan Plateau than previous thought, wherein substantial crustal thickening of the plateau occurred at subtropical latitudes above an oceanic subduction zone in the absence of a continent-continent collision, sensu stricto. Although our Lhasa APWP is constructed from only a handful paleomagnetic studies, these data were processed in a framework consistent with an empirical and modeling-based understanding of geomagnetic field behavior and detrital magnetization processes. By contrast, the majority of volcanic-based paleomagnetic poles used in recent reviews of paleomagnetic data from Asia do not average paleosecular variation and therefore cannot be used ';as-is' or used as a baseline against which to compare detrital paleomagnetic records.

  11. Greater happiness for a greater number: Is that possible in Austria?

    NARCIS (Netherlands)

    R. Veenhoven (Ruut)


    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time the happiness of the great number could not be measured

  12. Greater happiness for a greater number: Is that possible? If so how? (Arabic)

    NARCIS (Netherlands)

    R. Veenhoven (Ruut); E. Samuel (Emad)


    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time, the happiness of the great number could not be

  13. Greater happiness for a greater number: Is that possible in Germany?

    NARCIS (Netherlands)

    R. Veenhoven (Ruut)


    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time the Happiness of the great number could not be measured

  14. Prospects of solar photovoltaic–micro-wind based hybrid power systems in western Himalayan state of Himachal Pradesh in India

    International Nuclear Information System (INIS)

    Sinha, Sunanda; Chandel, S.S.


    Highlights: • Good prospects of PV–wind hybrid systems are found in western Himalayan Indian state. • A 6 kWp roof mounted PV–micro wind hybrid system at Hamirpur location is studied. • Optimum PV–wind hybrid system configurations are determined for 12 locations in the region. • Comparative analysis of hybrid systems is carried out using ANN, NASA and measured data. • Methodology can be used for assessing the potential of hybrid power systems worldwide. - Abstract: The western Himalayan state of Himachal Pradesh is known as the hydro-power state of India with associated social and environmental problems of large hydro power plants. The reduced water inflow in the rivers during extreme winters affects power generation in the state. Therefore solar and wind resources need to be utilized to supplement power generation requirements. With this objective the prospects of photovoltaic–micro wind based hybrid systems are studied for 12 locations of the state. The NASA data, Artificial Neural Network predicted and ground measured data are used in the analysis of Hamirpur location whereas for remaining 11 locations estimated, NASA and Artificial Neural Network predicted data are used, as measured solar and wind data are not available for most of the locations in the state. Root Mean Square Error between three input data types are found to range from 0.08 to 1.89. The results show that ANN predicted data are close to measured/estimated data. A 6 kWp roof mounted photovoltaic–micro wind hybrid system at Hamirpur with daily average energy demand of 5.2 kWh/day is studied. This system specifications are used to obtain optimum PV–micro wind based hybrid power system configurations for all locations. The optimum configuration for Hamirpur is found to be a 5 kWp micro wind turbine, 2 kW converter, 10 batteries and 8 kWp PV system whereas for other 11 locations a 5 kWp micro wind turbine, 2 kW converter, 10 batteries and 2–9 kWp PV systems are obtained. The

  15. Search for greater stability in nuclear regulation

    International Nuclear Information System (INIS)

    Asselstine, J.K.


    The need for greater stability in nuclear regulation is discussed. Two possible approaches for dealing with the problems of new and rapidly changing regulatory requirements are discussed. The first approach relies on the more traditional licensing reform initiatives that have been considered off and on for the past decade. The second approach considers a new regulator philosophy aimed at the root causes of the proliferation of new safety requirements that have been imposed in recent years. For the past few years, the concepts of deregulation and regulatory reform have been in fashion in Washington, and the commercial nuclear power program has not remained unaffected. Many look to these concepts to provide greater stability in the regulatory program. The NRC, the nuclear industry and the administration have all been avidly pursuing regulatory reform initiatives, which take the form of both legislative and administrative proposals. Many of these proposals look to the future, and, if adopted, would have little impact on currently operating nuclear power plants or plants now under construction

  16. Greater Sudbury fuel efficient driving handbook

    Energy Technology Data Exchange (ETDEWEB)



    Reducing the amount of fuel that people use for personal driving saves money, improves local air quality, and reduces personal contributions to climate change. This handbook was developed to be used as a tool for a fuel efficient driving pilot program in Greater Sudbury in 2009-2010. Specifically, the purpose of the handbook was to provide greater Sudbury drivers with information on how to drive and maintain their personal vehicles in order to maximize fuel efficiency. The handbook also provides tips for purchasing fuel efficient vehicles. It outlines the benefits of fuel maximization, with particular reference to reducing contributions to climate change; reducing emissions of air pollutants; safe driving; and money savings. Some tips for efficient driving are to avoid aggressive driving; use cruise control; plan trips; and remove excess weight. Tips for efficient winter driving are to avoid idling to warm up the engine; use a block heater; remove snow and ice; use snow tires; and check tire pressure. The importance of car maintenance and tire pressure was emphasized. The handbook also explains how fuel consumption ratings are developed by vehicle manufacturers. refs., figs.

  17. Women at greater risk of HIV infection. (United States)

    Mahathir, M


    Although many people believe that mainly men get infected with HIV/AIDS, women are actually getting infected at a faster rate than men, especially in developing countries, and suffer more from the adverse impact of AIDS. As of mid-1996, the Joint UN Program on AIDS estimated that more than 10 million of the 25 million adults infected with HIV since the beginning of the epidemic are women. The proportion of HIV-positive women is growing, with almost half of the 7500 new infections daily occurring among women. 90% of HIV-positive women live in a developing country. In Asia-Pacific, 1.4 million women have been infected with HIV out of an estimated total 3.08 million adults from the late 1970s until late 1994. Biologically, women are more vulnerable than men to infection because of the greater mucus area exposed to HIV during penile penetration. Women under age 17 years are at even greater risk because they have an underdeveloped cervix and low vaginal mucus production. Concurrent sexually transmitted diseases increase the risk of HIV transmission. Women's risk is also related to their exposure to gender inequalities in society. The social and economic pressures of poverty exacerbate women's risk. Prevention programs are discussed.

  18. Antioxidant capacities, phenolic profile and cytotoxic effects of saxicolous lichens from trans-Himalayan cold desert of Ladakh.

    Directory of Open Access Journals (Sweden)

    Jatinder Kumar

    Full Text Available Fourteen saxicolous lichens from trans-Himalayan Ladakh region were identified by morpho-anatomical and chemical characteristics. The n-hexane, methanol and water extracts of the lichens were evaluated for their antioxidant capacities. The lichen extracts showing high antioxidant capacities and rich phenolic content were further investigated to determine their cytotoxic activity on human HepG2 and RKO carcinoma cell lines. The ferric reducing antioxidant power (FRAP, 2,2'-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid diammonium salt (ABTS, 1,1-diphenyl-2-picrylhydrazyl (DPPH and nitric oxide (NO radical scavenging capacities and β-carotene-linoleic acid bleaching property exhibited analogous results where the lichen extracts showed high antioxidant action. The lichen extracts were also found to possess good amount of total proanthocyanidin, flavonoid and polyphenol. The methanolic extract of Lobothallia alphoplaca exhibited highest FRAP value. Methanolic extract of Xanthoparmelia stenophylla showed the highest ABTS radical scavenging capacity. The n-hexane extract of Rhizoplaca chrysoleuca exhibited highest DPPH radical scavenging capacity. Highest antioxidant capacity in terms of β-carotene linoleic acid bleaching property was observed in the water extract of Xanthoria elegans. Similarly, Melanelia disjuncta water extract showed highest NO scavenging capacity. Among n-hexane, methanol and water extracts of all lichens, the methanolic extract of Xanthoparmelia mexicana showed highest total proanthocyanidin, flavonoid and polyphenol content. From cytotoxic assay, it was observed that the methanolic extracts of L. alphoplaca and M. disjuncta were exhibiting high cytotoxic effects against cancer cell growth. Similarly, the water extract of Dermatocarpon vellereum, Umbilicaria vellea, X. elegans and M. disjuncta and the methanolic extract of M. disjuncta and X. stenophylla were found to possess high antioxidant capacities and were non-toxic and

  19. The strong motion amplitudes from Himalayan earthquakes and a pilot study for the deterministic first order microzonation of Delhi City

    International Nuclear Information System (INIS)

    Parvez, Imtiyaz A.; Panza, G.F.; Gusev, A.A.; Vaccari, F.


    The interdependence among the strong-motion amplitude, earthquake magnitude and hypocentral distance has been established (Parvez et al. 2001) for the Himalayan region using the dataset of six earthquakes, two from Western and four from Eastern Himalayas (M w =5.2-7.2) recorded by strong-motion networks in the Himalayas. The level of the peak strong motion amplitudes in the Eastern Himalayas is three fold larger than that in the Western Himalayas, in terms of both peak acceleration and peak velocities. In the present study, we include the strong motion data of Chamoli earthquake (M w =6.5) of 1999 from the western sub-region to see whether this event supports the regional effects and we find that the new result fits well with our earlier prediction in the Western Himalayas. The minimum estimates of peak acceleration for the epicentral zone of M w =7.5-8.5 events is A peak =0.25-0.4 g for the Western Himalayas and as large as A peak =1.0-1.6 g for the Eastern Himalayas. Similarly, the expected minimum epicentral values of V peak for M w =8 are 35 cm/s for Western and 112 cm/s for Eastern Himalayas. The presence of unusually high levels of epicentral amplitudes for the eastern subregion also agrees well with the macroseismic evidence (Parvez et al. 2001). Therefore, these results represent systematic regional effects, and may be considered as a basis for future regionalized seismic hazard assessment in the Himalayan region. Many metropolitan and big cities of India are situated in the severe hazard zone just south of the Himalayas. A detailed microzonation study of these sprawling urban centres is therefore urgently required for gaining a better understanding of ground motion and site effects in these cities. An example of the study of site effects and microzonation of a part of metropolitan Delhi is presented based on a detailed modelling along a NS cross sections from the Inter State Bus Terminal (ISBT) to Sewanagar. Full synthetic strong motion waveforms have been

  20. Small cities face greater impact from automation. (United States)

    Frank, Morgan R; Sun, Lijun; Cebrian, Manuel; Youn, Hyejin; Rahwan, Iyad


    The city has proved to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: how will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across US urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content substitutions. We demonstrate that large cities exhibit increased occupational and skill specialization due to increased abundance of managerial and technical professions. These occupations are not easily automatable, and, thus, reduce the potential impact of automation in large cities. Our results pass several robustness checks including potential errors in the estimation of occupational automation and subsampling of occupations. Our study provides the first empirical law connecting two societal forces: urban agglomeration and automation's impact on employment. © 2018 The Authors.

  1. Small cities face greater impact from automation (United States)

    Sun, Lijun; Cebrian, Manuel; Rahwan, Iyad


    The city has proved to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: how will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across US urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content substitutions. We demonstrate that large cities exhibit increased occupational and skill specialization due to increased abundance of managerial and technical professions. These occupations are not easily automatable, and, thus, reduce the potential impact of automation in large cities. Our results pass several robustness checks including potential errors in the estimation of occupational automation and subsampling of occupations. Our study provides the first empirical law connecting two societal forces: urban agglomeration and automation's impact on employment. PMID:29436514

  2. Planning for greater-confinement disposal

    International Nuclear Information System (INIS)

    Gilbert, T.L.; Luner, C.; Meshkov, N.K.; Trevorrow, L.E.; Yu, C.


    This contribution is a progress report for preparation of a document that will summarize procedures and technical information needed to plan for and implement greater-confinement disposal (GCD) of low-level radioactive waste. Selection of a site and a facility design (Phase I), and construction, operation, and extended care (Phase II) will be covered in the document. This progress report is limited to Phase I. Phase I includes determination of the need for GCD, design alternatives, and selection of a site and facility design. Alternative designs considered are augered shafts, deep trenches, engineered structures, high-integrity containers, hydrofracture, and improved waste form. Design considerations and specifications, performance elements, cost elements, and comparative advantages and disadvantages of the different designs are covered. Procedures are discussed for establishing overall performance objectives and waste-acceptance criteria, and for comparative assessment of the performance and cost of the different alternatives. 16 references

  3. Greater confinement disposal of radioactive wastes

    International Nuclear Information System (INIS)

    Trevorrow, L.E.; Gilbert, T.L.; Luner, C.; Merry-Libby, P.A.; Meshkov, N.K.; Yu, C.


    Low-level radioactive waste (LLW) includes a broad spectrum of different radionuclide concentrations, half-lives, and hazards. Standard shallow-land burial practice can provide adequate protection of public health and safety for most LLW. A small volume fraction (approx. 1%) containing most of the activity inventory (approx. 90%) requires specific measures known as greater-confinement disposal (GCD). Different site characteristics and different waste characteristics - such as high radionuclide concentrations, long radionuclide half-lives, high radionuclide mobility, and physical or chemical characteristics that present exceptional hazards - lead to different GCD facility design requirements. Facility design alternatives considered for GCD include the augered shaft, deep trench, engineered structure, hydrofracture, improved waste form, and high-integrity container. Selection of an appropriate design must also consider the interplay between basic risk limits for protection of public health and safety, performance characteristics and objectives, costs, waste-acceptance criteria, waste characteristics, and site characteristics

  4. Planning for greater-confinement disposal

    International Nuclear Information System (INIS)

    Gilbert, T.L.; Luner, C.; Meshkov, N.K.; Trevorrow, L.E.; Yu, C.


    This contribution is a progress report for preparation of a document that will summarize procedures and technical information needed to plan for and implement greater-confinement disposal (GCD) of low-level radioactive waste. Selection of a site and a facility design (Phase I), and construction, operation, and extended care (Phase II) will be covered in the document. This progress report is limited to Phase I. Phase I includes determination of the need for GCD, design alternatives, and selection of a site and facility design. Alternative designs considered are augered shafts, deep trenches, engineered structures, high-integrity containers, hydrofracture, and improved waste form. Design considerations and specifications, performance elements, cost elements, and comparative advantages and disadvantages of the different designs are covered. Procedures are discussed for establishing overall performance objecties and waste-acceptance criteria, and for comparative assessment of the performance and cost of the different alternatives. 16 refs

  5. Leaf area index retrieval using Hyperion EO-1 data-based vegetation indices in Himalayan forest system (United States)

    Singh, Dharmendra; Singh, Sarnam


    Present Study is being taken to retrieve Leaf Area Indexn(LAI) in Himalayan forest system using vegetation indices developed from Hyperion EO-1 hyperspectral data. Hemispherical photograph were captured in the month of March and April, 2012 at 40 locations, covering moist tropical Sal forest, subtropical Bauhinia and pine forest and temperate Oak forest and analysed using an open source GLA software. LAI in the study region was ranging in between 0.076 m2/m2 to 6.00 m2/m2. These LAI values were used to develop spectral models with the FLAASH corrected Hyperion measurements.Normalized difference vegetation index (NDVI) was used taking spectral reflectance values of all the possible combinations of 170 atmospherically corrected channels. The R2 was ranging from lowest 0.0 to highest 0.837 for the band combinations of spectral region 640 nm and 670 nm. The spectral model obtained was, spectral reflectance (y) = 0.02x LAI(x) - 0.0407.

  6. Mesozoic alkaline plutonism: Evidence for extensional phase in Alpine-Himalayan orogenic belt in Central Alborz, north Iran

    Directory of Open Access Journals (Sweden)

    Roghieh Doroozi


    Full Text Available The Kamarbon Jurassic alkaline basic intrusion crops out in Central Alborz, north Iran, along the northern margin of the Alpine-Himalayan belt. The intrusion includes foid gabbros at the margins and foid monzodiorites towards the center. The foid monzodiorites are considered as the evolved melts after the fractional crystallization mostly of olivine and clinopyroxene from a foid gabbro parental magma. Based on mass balance calculation the evolution of the Kamarbon alkaline gabbro could be explained by 19.2% fractionation of clinopyroxene, 13.8% of olivine, 3% of plagioclase and 1.0% Ti-Magnetite, with 63% of residual liquid. REE inversion modeling indicates that the Kamarbon intrusion magma was generated by low degrees (<3% of partial melting from a garnet-bearing mantle source. In primitive mantle-normalized incompatible element diagrams, the Kamarbon rocks show enrichment in LILE elements (Ba, Rb, Sr and Th, HFSE elements (Nb, Ta, Ti, Zr and Hf and P and depletion in K, Y and HREE (Yb, Lu which are similar to patterns of HIMU-OIBs or intraplate alkaline magmas. According to the existence of extensional phases and occurrence of different rifting during late Triassic to middle Jurassic in Central Alborz, the formation of Kamarbon intrusion could be related to an intracontinental rifting.

  7. Distribution of arbuscular mycorrhizal fungi associated with different land use systems of Arunachal Pradesh of Eastern Himalayan region. (United States)

    Bordoloi, A; Nath, P C; Shukla, A K


    Arbuscular mycorrhizal fungi are the main component of soil microbial population in most agroecosystems. They forms a close association with more than 80% of the plant species making immobilized mineral nutrients available to the plants in order to sustain normal growth and reproduction. In this study the diversity of mycorrhizal fungi has been examined in seven land use ecosystems of Arunachal Pradesh in Eastern Himalayan region. A total of 24 species of AM fungi belonging to 4 genera viz., Glomus, Scutellospora, Aculospora and Gigaspora were isolated from the soil samples collected from different land use systems. Glomus was the dominant genera and Glomus occulatum was the most abundant species in all the seven land use systems. Total spore number was highly variable among all the land use systems. Species richness was recorded highest in natural forest that maintains a faster nutrient cycle with the highest diversity index. The Jhum fallow land and tea garden has the least number of AM fungal species due to high disturbance of fire and application of fungicides and inorganic fertilizer. Further the plant species composition, particularly the ground vegetation coverage and disturbance level affects the distribution of the AM fungal species. In our study it has been shown that AMF diversity is significantly affected by the land use practices practiced by the people. Hence, the AM fungi isolated from different land use system may be useful in improving the agriculture practices particularly the plantation crops in the region.

  8. Contrasting predictability of summer monsoon rainfall ISOs over the northeastern and western Himalayan region: an application of Hurst exponent (United States)

    Mukherjee, Sandipan


    Due to heterogeneous nonlinear forcing of complex geomorphological features, predictability of monsoon rainfall 10-90-day intra-seasonal oscillations (ISO) over the complex terrain of northeastern and western Himalayan region (NEH and WH) remained poorly quantified. Using 72 and 61 number of station observations of monsoon rainfall ISOs of NEH and WH, respectively, this study attempts to investigate variation in the regional scale predictability of monsoon rainfall ISOs with respect to changing geomorphological features and monsoon rainfall characteristics. In view of the bimodal nonlinear dynamical structure of monsoon rainfall ISO, the fractal dynamical Hurst exponent-based predictability indices are estimated as an indicator of predictability for station observations of NEH and WH, and relationships with elevations, slopes, aspects, and average numbers of occurrences of long (short) spell of active (break) phases are investigated. Results show 10-90-day ISOs are anti-persistent throughout the IHR, although, predictability of 10-90-day ISOs is higher over the NEH region than WH. Predictabilities of ISOs are found to decrease with increasing elevation and slope for both NEH and WH regions. Predictabilities of ISOs over both regions are also found to increase linearly as the number of occurrences of monsoon rainfall ISO phases (active/break) increases.

  9. Himalayan ibex (Capra ibex sibirica habitat suitability and range resource dynamics in the Central Karakorum National Park, Pakistan

    Directory of Open Access Journals (Sweden)

    Garee Khan


    Full Text Available The study investigates Himalayan ibex (Capra ibex sibirica and their range resource condition within the preferred habitat in the Central Karakoram National Park, Pakistan. We apply ecological niche factor analysis (ENFA using 110 ibex sighting data and 6 key biophysical variables describing the habitat conditions and produce habitat suitability and maps with GIS and statistical tool (BioMapper. The modeling results of specialization factor shows some limitation for ibex over the use of slope, elevation, vegetation types and ruggedness. The habitat area selection for the ibex is adjusted to the ibex friendly habitat available conditions. The model results predicted suitable habitat for ibex in certain places, where field observation was never recorded. The range resource dynamics depict a large area that comes under the alpine meadows has the highest seasonal productivity, assessed by remote sensing based fortnightly vegetation condition data of the last 11 years. These meadows are showing browning trend over the years, attributable to grazing practices or climate conditions. At lower elevation, there are limited areas with suitable dry steppes, which may cause stress on ibex, especially during winter.


    Directory of Open Access Journals (Sweden)

    Achyut ARYAL


    Full Text Available The Himalayan musk deer (Moschus chrysogaster is a cervid distributed from the eastern to the western Himalayas of Nepal. The species is listed as endangered in appendix I of IUCN Red data, and protected in Nepal under the National Parks and Wildlife Conservation Act of 1973. Musk deer occupy the middle to the higher mountain regions, which cover 12 protected areas of Nepal (6 national parks, 5 conservation areas, 1 hunting reserve. However, of the 30177.19 km2 potential habitat, only 19.26% (5815.08 km2 is inside the protected areas and the remaining 80.73% falls outside the protected areas. Consequently, poaching, habitat destruction, livestock grazing and forest fire in the musk deer habitat are important challenges for the conservation of musk deer in the country. A thorough status survey in and outside the protected areas should be carried out and a species-focused conservation action plan should be prepared and implemented properly. A program for increasing awareness and enhancing livelihood of the local populations be launched in the poor and poaching risk zones of Nepal.

  11. Nitrogen and carbon source-sink relationships in trees at the Himalayan treelines compared with lower elevations. (United States)

    Li, Mai-He; Xiao, Wen-Fa; Shi, Peili; Wang, San-Gen; Zhong, Yong-De; Liu, Xing-Liang; Wang, Xiao-Dan; Cai, Xiao-Hu; Shi, Zuo-Min


    No single hypothesis or theory has been widely accepted for explaining the functional mechanism of global alpine/arctic treeline formation. The present study tested whether the alpine treeline is determined by (1) the needle nitrogen content associated with photosynthesis (carbon gain); (2) a sufficient source-sink ratio of carbon; or (3) a sufficient C-N ratio. Nitrogen does not limit the growth and development of trees studied at the Himalayan treelines. Levels of non-structural carbohydrates (NSC) in trees were species-specific and site-dependent; therefore, the treeline cases studied did not show consistent evidence of source/carbon limitation or sink/growth limitation in treeline trees. However, results of the combined three treelines showed that the treeline trees may suffer from a winter carbon shortage. The source capacity and the sink capacity of a tree influence its tissue NSC concentrations and the carbon balance; therefore, we suggest that the persistence and development of treeline trees in a harsh alpine environment may require a minimum level of the total NSC concentration, a sufficiently high sugar:starch ratio, and a balanced carbon source-sink relationship.

  12. Capturing forest dependency in the central Himalayan region: Variations between Oak (Quercus spp.) and Pine (Pinus spp.) dominated forest landscapes. (United States)

    Chakraborty, Anusheema; Joshi, Pawan Kumar; Sachdeva, Kamna


    Our study explores the nexus between forests and local communities through participatory assessments and household surveys in the central Himalayan region. Forest dependency was compared among villages surrounded by oak-dominated forests (n = 8) and pine-dominated forests (n = 9). Both quantitative and qualitative analyses indicate variations in the degree of dependency based on proximity to nearest forest type. Households near oak-dominated forests were more dependent on forests (83.8%) compared to households near pine-dominated forests (69.1%). Forest dependency is mainly subsistence-oriented for meeting basic household requirements. Livestock population, cultivated land per household, and non-usage of alternative fuels are the major explanatory drivers of forest dependency. Our findings can help decision and policy makers to establish nested governance mechanisms encouraging prioritized site-specific conservation options among forest-adjacent households. Additionally, income diversification with respect to alternate livelihood sources, institutional reforms, and infrastructure facilities can reduce forest dependency, thereby, allowing sustainable forest management.

  13. Landslide hazard assessment along a mountain highway in the Indian Himalayan Region (IHR) using remote sensing and computational models (United States)

    Krishna, Akhouri P.; Kumar, Santosh


    Landslide hazard assessments using computational models, such as artificial neural network (ANN) and frequency ratio (FR), were carried out covering one of the important mountain highways in the Central Himalaya of Indian Himalayan Region (IHR). Landslide influencing factors were either calculated or extracted from spatial databases including recent remote sensing data of LANDSAT TM, CARTOSAT digital elevation model (DEM) and Tropical Rainfall Measuring Mission (TRMM) satellite for rainfall data. ANN was implemented using the multi-layered feed forward architecture with different input, output and hidden layers. This model based on back propagation algorithm derived weights for all possible parameters of landslides and causative factors considered. The training sites for landslide prone and non-prone areas were identified and verified through details gathered from remote sensing and other sources. Frequency Ratio (FR) models are based on observed relationships between the distribution of landslides and each landslide related factor. FR model implementation proved useful for assessing the spatial relationships between landslide locations and factors contributing to its occurrence. Above computational models generated respective susceptibility maps of landslide hazard for the study area. This further allowed the simulation of landslide hazard maps on a medium scale using GIS platform and remote sensing data. Upon validation and accuracy checks, it was observed that both models produced good results with FR having some edge over ANN based mapping. Such statistical and functional models led to better understanding of relationships between the landslides and preparatory factors as well as ensuring lesser levels of subjectivity compared to qualitative approaches.

  14. Digitizing information for wider reach through 'him-Padap-Sanklan', an e-inventory of Himalayan flora

    Directory of Open Access Journals (Sweden)

    Amit Kumar


    Full Text Available 'him-Padap-Sankalan' is a digital directory of floral resources of Himachal Pradesh H.P., a biologically rich state of the Himalayan Biodiversity hotspot. It provides information on nomenclature, taxonomic classification, local name(s, trade name(s and uses of 3348 plant species along with maps showing their distribution in H.P. The information housed in 'Him-Padap-Sankalan' has been compiled from published sources, primarily the Flora of Himachal Pradesh: Analysis. The Graphic User Interface of the 'him-Padap-Sankalan' has been prepared using ASP.Net having MS-Access database in the back end. The 'scientific names', 'trade names', 'local names', 'synonyms', 'genus' and 'species' are the various search modules of 'him-Padap-Sankalan', which can be accessed using an internet browser connected through local area network. Analysis of information reveals that of the 201 families, Poaceae, Asteraceae, Papilionaceae, Scrophularariaceae, Rosaceae, Cyperaceae, Lamiaceae, Ranunculaceae, Brassicaceae and Apiaceae are the ten dominat families in the state. 24 families and 18 genera are common to all the 12 districts of H.P. The maximum number of families, genera and species are in Shimla district and the least in Bilaspur district of H.P.

  15. Urban acid deposition in Greater Manchester

    Energy Technology Data Exchange (ETDEWEB)

    Lee, D.S.; Longhurst, J.W.S.; Gee, D.R.; Hare, S.E. (Manchester Polytechnic, Manchester (UK). Acid Rain Information Centre)


    Data are presented from a monitoring network of 18 bulk precipitation collectors and one wet-only collector in the urban area of Greater Manchester, in the north west of England. Weekly samples were analysed for all the major ions in precipitation along with gaseous nitrogen dioxide concentrations from diffusion tubes. Statistical analysis of the data shows significant spatial variation of non marine sulphate, nitrate, ammonium, acidity and calcium concentrations, and nitrogen dioxide concentrations. Calcium is thought to be responsible for the buffering of acidity and is of local origin. Wet deposition is the likely removal process for calcium in the atmosphere and probably by below cloud scavenging. Nitrate and ammonium concentrations and depositions show close spatial, temporal and statistical association. Examination of high simultaneous episodes of nitrate and ammonium deposition shows that these depositions cannot be explained in terms of trajectories and it is suggested that UK emissions of ammonia may be important. Statistical analysis of the relationships between nitrate and ammonium depositions, concentrations and precipitation amount suggest that ammonia from mesoscale sources reacts reversibly with nitric acid aerosol and is removed by below cloud scavenging. High episodes of the deposition of non marine sulphate are difficult to explain by trajectory analysis alone, perhaps suggesting local sources. In a comparison between wet deposition and bulk deposition, it was shown that only 15.2% of the non marine sulphur was dry deposited to the bulk precipitation collector. 63 refs., 86 figs., 31 tabs.

  16. Method and apparatus for biological sequence comparison (United States)

    Marr, T.G.; Chang, W.I.


    A method and apparatus are disclosed for comparing biological sequences from a known source of sequences, with a subject (query) sequence. The apparatus takes as input a set of target similarity levels (such as evolutionary distances in units of PAM), and finds all fragments of known sequences that are similar to the subject sequence at each target similarity level, and are long enough to be statistically significant. The invention device filters out fragments from the known sequences that are too short, or have a lower average similarity to the subject sequence than is required by each target similarity level. The subject sequence is then compared only to the remaining known sequences to find the best matches. The filtering member divides the subject sequence into overlapping blocks, each block being sufficiently large to contain a minimum-length alignment from a known sequence. For each block, the filter member compares the block with every possible short fragment in the known sequences and determines a best match for each comparison. The determined set of short fragment best matches for the block provide an upper threshold on alignment values. Regions of a certain length from the known sequences that have a mean alignment value upper threshold greater than a target unit score are concatenated to form a union. The current block is compared to the union and provides an indication of best local alignment with the subject sequence. 5 figs.

  17. A study of Guptkashi, Uttarakhand earthquake of 6 February 2017 ( M w 5.3) in the Himalayan arc and implications for ground motion estimation (United States)

    Srinagesh, Davuluri; Singh, Shri Krishna; Suresh, Gaddale; Srinivas, Dakuri; Pérez-Campos, Xyoli; Suresh, Gudapati


    The 2017 Guptkashi earthquake occurred in a segment of the Himalayan arc with high potential for a strong earthquake in the near future. In this context, a careful analysis of the earthquake is important as it may shed light on source and ground motion characteristics during future earthquakes. Using the earthquake recording on a single broadband strong-motion seismograph installed at the epicenter, we estimate the earthquake's location (30.546° N, 79.063° E), depth ( H = 19 km), the seismic moment ( M 0 = 1.12×1017 Nm, M w 5.3), the focal mechanism ( φ = 280°, δ = 14°, λ = 84°), the source radius ( a = 1.3 km), and the static stress drop (Δ σ s 22 MPa). The event occurred just above the Main Himalayan Thrust. S-wave spectra of the earthquake at hard sites in the arc are well approximated (assuming ω -2 source model) by attenuation parameters Q( f) = 500 f 0.9, κ = 0.04 s, and f max = infinite, and a stress drop of Δ σ = 70 MPa. Observed and computed peak ground motions, using stochastic method along with parameters inferred from spectral analysis, agree well with each other. These attenuation parameters are also reasonable for the observed spectra and/or peak ground motion parameters in the arc at distances ≤ 200 km during five other earthquakes in the region (4.6 ≤ M w ≤ 6.9). The estimated stress drop of the six events ranges from 20 to 120 MPa. Our analysis suggests that attenuation parameters given above may be used for ground motion estimation at hard sites in the Himalayan arc via the stochastic method.

  18. The treatment of jaundice with medicinal plants in indigenous communities of the Sub-Himalayan region of Uttarakhand, India. (United States)

    Sharma, Jyotsana; Gairola, Sumeet; Gaur, R D; Painuli, R M


    Inspite of tremendous advances made in allopathic medical practices, herbs still play an important role in the management of various liver diseases. A large number of plants and formulations have been claimed to have hepatoprotective activity. Jaundice is a symptom, indicative of the malfunctioning of the liver. This paper provides ethnomedicinal information on the plants used to treat jaundice by three important indigenous communities, i.e., nomadic Gujjars, Tharu and Bhoxa of Sub-Himalayan region, Uttarakhand, India. To record herbal preparations used by the studied indigenous communities in treatment of jaundice and discuss hepatoprotective properties of the recorded plants. The traditional knowledge of the studied indigenous communities on herbal preparations used for treating jaundice was collected through structured questionnaire and personal interviews. The interviews were conducted with 91 traditional healers (29 Bhoxa, 35 Tharu and 27 nomadic Gujjars) in Sub-Himalayan region of Uttarakhand, India. More than 250 research papers reporting ethnomedicinal information on the hepatoprotective plants used by various communities from different parts of India were extensively reviewed. A total of 40 medicinal plants belonging to 31 families and 38 genera were recorded to be used by the studied communities in 45 formulations as a remedy of jaundice. Bhoxa, nomadic Gujjars and Tharu communities used 15, 23 and 9 plants, respectively. To our knowledge eight plants reported in the present survey viz., Amaranthus spinosus L., Cissampelos pareira L., Ehretia laevis Roxb., Holarrhena pubescens Wall., Ocimum americanum L., Physalis divaricata D. Don, Solanum incanum L. and Trichosanthes cucumerina L. have not been reported earlier as remedy of jaundice in India. Literature review revealed that a total of 214 (belonging to 181 genus and 78 families), 19 (belonging to 18 genus and 12 families) and 14 (belonging to 14 genus and 11 families) plant species are used as internal

  19. Timing of initiation and fault rates of the Yushu-Xianshuihe-Xiaojiang fault system around the eastern Himalayan syntaxis. (United States)

    Hervé Leloup, Philippe; Replumaz, Anne; Chevalier, Marie-Luce; Zhang, Yuan-Ze; Paquette, Jean-Louis; Wang, Guo-Can; Bernet, Matthias; van der Beek, Peter; Pan, Jiawei; Metois, Marianne; Li, Haibing


    In eastern Tibet, the left-lateral strike-slip Yushu-Xianshuihe-Xiaojiang fault system (YXX-FS) is 1400 km long, veering from N100° to N175° broadly following a small circle whose pole is located in the eastern Himalayan syntaxis. Several competing models are proposed to explain the geological evolution of eastern Tibet, and in particular of the YXX-FS: fault following slip-lines in a plastic media, book-shelf fault in a large right-lateral shear zone, or fault bounding a lower channel flow veering around the syntaxis. In this contribution we document the timing of onset of the YXX-FS, its propagation through time, its rate at various time-scales; and discuss how these relate to the deformation models. The YXX-FS comprises four segments from east (Tibetan Plateau) to west (Yunnan): Yushu-Ganzi, Xianshuihe, Anninghe, and Zemuhe-Xiaojiang. It is one of the most tectonically active intra-continental fault system in China along which more than 20 M>6.5 earthquakes occurred since 1700. Slip-rates of 3.5 to 30 mm/yr along the YXX-FS have been suggested by matching geological offsets of 60-100 km with initiation ages of 2 to 17 Ma. Late Quaternary rates deduced from morphological offsets, InSAR, paleoseismology and GPS also show a large range: between 3 and 20 mm/yr. The timing of initiation of the Yushu-Ganzi segment has been constrained at 12.6±1 Ma and its total offset to 76 - 90 km (Wang et al., 2009) yielding a rate of 6.6+0.8-0.7 mm/yr. By measuring the offsets of moraine crests and fan edges across the fault using LiDAR and kinematic GPS, and dating their surfaces using 10Be, we determined slip-rates of 7+1.1-1.0 mm/yr, 3 - 11.2 mm/yr and 8.5+0.8-0.7 mm/yr at three different sites. This suggests a constant rate of 6-8 mm/yr along the fault segment since 13Ma. The timing of initiation of the Xianshuihe segment was thought to be prior to 12.8±1.4 Ma (Roger et al., 1995), but new field studies and geochronological ages suggest that the fault initiated later. Using

  20. Low fidelity of CORDEX and their driving experiments indicates future climatic uncertainty over Himalayan watersheds of Indus basin (United States)

    Hasson, Shabeh ul; Böhner, Jürgen; Chishtie, Farrukh


    Assessment of future water availability from the Himalayan watersheds of Indus Basin (Jhelum, Kabul and upper Indus basin—UIB) is a growing concern for safeguarding the sustainable socioeconomic wellbeing downstream. This requires, before all, robust climate change information from the present-day state-of-the-art climate models. However, the robustness of climate change projections highly depends upon the fidelity of climate modeling experiments. Hence, this study assesses the fidelity of seven dynamically refined (0.44° ) experiments, performed under the framework of the coordinated regional climate downscaling experiment for South Asia (CX-SA), and additionally, their six coarse-resolution driving datasets participating in the coupled model intercomparison project phase 5 (CMIP5). We assess fidelity in terms of reproducibility of the observed climatology of temperature and precipitation, and the seasonality of the latter for the historical period (1971-2005). Based on the model fidelity results, we further assess the robustness or uncertainty of the far future climate (2061-2095), as projected under the extreme-end warming scenario of the representative concentration pathway (RCP) 8.5. Our results show that the CX-SA and their driving CMIP5 experiments consistently feature low fidelity in terms of the chosen skill metrics, suggesting substantial cold (6-10 ° C) and wet (up to 80%) biases and underestimation of observed precipitation seasonality. Surprisingly, the CX-SA are unable to outperform their driving datasets. Further, the biases of CX-SA and of their driving CMIP5 datasets are higher in magnitude than their projected changes under RCP8.5—and hence under less extreme RCPs—by the end of 21st century, indicating uncertain future climates for the Indus Basin watersheds. Higher inter-dataset disagreements of both CMIP5 and CX-SA for their simulated historical precipitation and for its projected changes reinforce uncertain future wet/dry conditions

  1. Adverse impacts of pasture abandonment in Himalayan protected areas: Testing the efficiency of a Natural Resource Management Plan (NRMP)

    International Nuclear Information System (INIS)

    Nautiyal, Sunil; Kaechele, Harald


    The high elevational areas in the Himalayas of India are dominated by forests and alpine pastures. There are many protected areas in the region, including Nanda Devi Biosphere Reserve (NDBR) and Valley of Flowers (VOF) where natural resource management plan (NRMP) has been implemented for the conservation of biodiversity. This has affected the traditional animal husbandry system, as well as the vegetation dynamics of alpine pastures. An integrated approach to studying the impact of NRMP in the region has been applied by us. First, a survey was conducted regarding livestock management, data pertaining the livestock husbandry, the role of animal husbandry in economics of rural household, and socioeconomics. Second, field based study on phytosociology of some important alpine herbs was done to enumerate the density and species richness in different land mark of the region. Thereafter, satellite data and Geographic Information System (GIS) were used to develop a land cover map of the area and to note changes in the landscape over time after implementation of NRMP. From an economic point of view the implementation of such plan is a setback to the rural economy. However, the ecological perspective of such models is a threat to the diversity of alpine pastures. The invasion of bushes/thorny bushes/shrubs and weeds with their luxuriant growth is changing the vegetation index and dynamics. Consequently, the diversity of herbs in alpine pastures of the Himalayan Mountains is in jeopardy. Overall, the situation is leading to landscape change in the region. This study is helpful for generating useful outcomes and strategies considering the question or debate 'is grazing good or bad for pasture ecosystems in the Himalayas?'

  2. Soil carbon stocks along an altitudinal gradient in different land-use categories in Lesser Himalayan foothills of Kashmir (United States)

    Shaheen, H.; Saeed, Y.; Abbasi, M. K.; Khaliq, A.


    The carbon sequestration potential of soils plays an important role in mitigating the effect of climate change, because soils serve as sinks for atmospheric carbon. The present study was conducted to estimate the carbon stocks and their variation with altitudinal gradient in the Lesser Himalayan foothills of Kashmir. The carbon stocks were estimated in different land use categories, namely: closed canopy forests, open forests, disturbed forests, and agricultural lands within the altitudinal range from 900 to 2500 m. The soil carbon content was determined by the Walkley-Black titration method. The average soil carbon stock was found to be 2.59 kg m-2. The average soil carbon stocks in closed canopy forests, open forests, and disturbed forests were 3.39, 2.06, and 2.86 kg m-2, respectively. The average soil carbon stock in the agricultural soils was 2.03 kg m-2. The carbon stocks showed a significant decreasing trend with the altitudinal gradient with maximum values of 4.13 kg m-2 at 900-1200 m a.s.l. and minimum value of 1.55 kg m-2 at 2100-2400 m a.s.l. The agricultural soil showed the least carbon content values indicating negative impacts of soil plowing, overgrazing, and soil degradation. Lower carbon values at higher altitudes attest to the immature character of forest stands, as well as to degradation due to immense fuel wood extraction, timber extraction, and harsh climatic conditions. The study indicates that immediate attention is required for the conservation of rapidly declining carbon stocks in agricultural soils, as well as in the soils of higher altitudes.

  3. Assessment of Land-Use/Land-Cover Change and Forest Fragmentation in the Garhwal Himalayan Region of India

    Directory of Open Access Journals (Sweden)

    Amit Kumar Batar


    Full Text Available The Garhwal Himalaya has experienced extensive deforestation and forest fragmentation, but data and documentation detailing this transformation of the Himalaya are limited. The aim of this study is to analyse the observed changes in land cover and forest fragmentation that occurred between 1976 and 2014 in the Garhwal Himalayan region in India. Three images from Landsat 2 Multispectral Scanner System (MSS, Landsat 5 Thematic Mapper (TM, and Landsat 8 Operational Land Imager (OLI were used to extract the land cover maps. A cross-tabulation detection method in the geographic information system (GIS module was used to detect land cover changes during the 1st period (1976–1998 and 2nd period (1998–2014. The landscape fragmentation tool LFT v2.0 was used to construct a forest fragmentation map and analyse the forest fragmentation pattern and change during the 1st period (1976–1998 and 2nd period (1998–2014. The overall annual rate of change in the forest cover was observed to be 0.22% and 0.27% in the 1st period (1976–1998 and 2nd period (1998–2014, respectively. The forest fragmentation analysis shows that a large core forest has decreased throughout the study period. The total area of forest patches also increased from 1976 to 2014, which are completely degraded forests. The results indicate that anthropogenic activities are the main causes of the loss of forest cover and forest fragmentation, but that natural factors also contributed. An increase in the area of scrub and barren land also contributed to the accumulation of wasteland or non-forest land in this region. Determining the trend and the rate of land cover conversion is necessary for development planners to establish a rational land use policy.

  4. Haemato-biochemical and endocrine profiling of north western Himalayan Gaddi sheep during various physiological/reproductive phases

    Directory of Open Access Journals (Sweden)

    A. Sharma


    Full Text Available The study was aimed to provide baseline data regarding haemato-biochemical and endocrine profiling of Gaddi sheep found in north western Himalayan region of Himachal Pradesh, India. Each random sample was collected from 45 Gaddi sheep reared in government sheep breeding farm Tal, Hamirpur, India, during various reproductive phases viz. anestrus, breeding season and post partum period. Haematology revealed significantly higher (P<0.05 RBC as well as haematocrit values in pregnant animals (n=23 during breeding season than during other reproductive phases. The number of platelets were significantly lower (P<0.05 and MCH, MCHC values were statistically higher (P<0.05 during postpartum period than during other reproductive phases. Blood biochemistry revealed significantly higher (P<0.05 concentrations of plasma cholesterol (83.98±3.68 mg/dl, plasma calcium (71.06±1.52 mg/l, magnesium (18.21±0.53 mg/l, potassium (5.10±0.13 mEq/l and significantly lower (P<0.05 concentrations of plasma total protein (5.75±0.31 gm/dl, globulin (3.04±0.29 gm/dl and sodium (138.83±1.83 mEq/l during postpartum period in comparison to other reproductive phases. Endocrine profile revealed significantly higher (P<0.05 serum estrogen (60.97±1.24 pg/ml and T4 (6.0±0.27 μg/ml concentrations during postpartum phase. Similarly, significantly higher (P<0.05 serum progesterone (5.16±0.76 ng/ml as well as TSH (0.70±0.14 μg/ml concentration were recorded during pregnancy. From the study it can be concluded that physiological status significantly affects the blood metabolic and endocrine profile in Gaddi sheep.

  5. Malnutrition as a cause of mental retardation: A population-based study from Sub-Himalayan India

    Directory of Open Access Journals (Sweden)

    Sunil Kumar Raina


    Full Text Available Background: Mental retardation is one of the most common disabilities of childhood. The research on childhood malnutrition and its relationship with cognitive functioning suggests that malnutrition alone does not cause mental retardation. Objective: To identify the relation between malnutrition and cognition among children from a Sub-Himalayan state in North India. Materials and Methods: A two-phase cross-sectional study was conducted in the rural, urban, and slum area of district Kangra. A 30-cluster sampling technique was used to screen a population of children 1–10 years of age from five randomly selected panchayats (village government units of district Kangra. The screening was based on a modified version of the ten questions screen, adapted to the local population. In the first phase, a door-to-door survey was done to identify suspects of mental retardation. In the second phase, the children found positive in the first phase were called for clinical examination to confirm mental retardation. Anthropometric assessment of all study children was done by measuring weight and height. The nutritional assessment was done by categorizing them according to Waterlow classification for malnutrition. Results: Out of the total 5300 children, 1.7% were diagnosed as mentally retarded. No positive association was reported with different types of malnutrition and mental retardation. A weakly positive association existed between nutritional status and mental retardation (correlation coefficient-0.04. Children who were both wasted and stunted had the highest risk (odds ratio, 95% confidence interval - 5.57, 2.29–10.36 of mental retardation as compared to normal. Conclusion: Malnutrition may be one of the causes but certainly not the only cause of mental retardation. Other causes may be contributing more significantly toward it.

  6. Exploring the physicochemical profile and the binding patterns of selected novel anticancer Himalayan plant derived active compounds with macromolecular targets

    Directory of Open Access Journals (Sweden)

    Arun Bahadur Gurung

    Full Text Available Plants are vital source of compounds offering plethora of therapeutic effects against various ailments without much side effects. Due to wide spread prevalence and drug resistance in cancer; there is an urgent need for discovery of new anti-cancer drugs. In the present study, selected novel anti-cancer plants derived compounds (cmpd1 to cmpd15 from Himalayan region were docked with defined molecular targets that regulate cell proliferation and apoptosis. The binding energies of best docked compounds ranged between −8.0 kcal/mol and −11.71 kcal/mol. Further analysis revealed critical hydrogen bonds and hydrophobic interactions between compounds and targets. The best docked compounds viz., cmpd15 against cyclin-dependent kinase-2 (CDK-2, cmpd8 against CDK-6 and cmpd9 against Topoisomerase I and II showed higher binding affinities than the native co-crystal ligands. The root mean square deviation (RMSD and potential energy plot clearly indicates the stability of the complexes during 20 ns molecular dynamics (MD simulation. The Molecular Mechanics/Poisson Boltzmann Surface Area (MM/PBSA binding energy analysis revealed Van der Waals energy component which is the principal stabilizing energy for their interactions except CDK-2/cmpd15 complex. The polar solvation energy did not have favorable contribution to their stabilization. The binding energy decomposition analysis revealed per residue contribution for each docked complexes. Physicochemical profile studies showed that majority of the compounds conform to Lipinski's rule of five (ROF having low to high blood brain barrier (BBB penetration, human intestinal absorption, plasma binding protein inhibition and P glycoprotein inhibition. Keywords: ADMET, Anticancer, MM/PBSA, Molecular docking, Molecular dynamics simulation and plant derived compounds

  7. Observed changes in surface air temperature and precipitation in the Hindu Kush Himalayan region over the last 100-plus years

    Directory of Open Access Journals (Sweden)

    Yu-Yu Ren


    Full Text Available In this paper, we analyzed the long-term changes in temperature and precipitation in the Hindu Kush Himalayan (HKH region based on climate datasets LSAT-V1.1 and CGP1.0 recently developed by the China Meteorological Administration. The analysis results show that during 1901–2014 the annual mean surface air temperature over the whole HKH has undergone a significant increasing trend. We determined the change rates in the mean temperature, mean maximum temperature, and mean minimum temperature to be 0.104 °C per decade, 0.077 °C per decade, and 0.176 °C per decade, respectively. Most parts of the HKH have experienced a warming trend, with the largest increase occurring on the Tibetan Plateau (TP and south of Pakistan. The trend of precipitation for the whole HKH is characterized by a slight decrease during 1901–2014. During 1961–2013, however, the trend of the annual precipitation shows a statistically significant increase, with a rate of 5.28% per decade and has a more rapid increase since the mid-1980s. Most parts of northern India and the northern TP have experienced a strong increase in the number of precipitation days (daily rainfall ≥1 mm, whereas Southwest China and Myanmar have experienced a declining trend in precipitation days. Compared to the trends in precipitation days, the spatial pattern of trends in the precipitation intensity seems to be more closely related to the terrain, and the higher altitude areas have shown more significant upward trends in precipitation intensity during 1961–2013.

  8. Terrane-Scale Metastability in Subducted Himalayan Continental Crust as Revealed by Integrated Petrological and Geodynamic Modeling (United States)

    Palin, R. M.; Reuber, G. S.; White, R. W.; Kaus, B. J. P.; Weller, O. M.


    The Tso Morari massif, northwest India, is one of only two regions in the Himalayan Range that exposes subduction-related ultrahigh-pressure (UHP) metamorphic rocks. The tectonic evolution of the massif is strongly debated, however, as reported pressure estimates for peak metamorphism range between 2.4 GPa and 4.8 GPa. Such ambiguity hinders effective lithospheric-scale modeling of the early stages of the orogen's evolution. We present the results of integrated petrological and geodynamic modeling (Palin et al., 2017, EPSL) that provide new quantitative constraints on the prograde-to-peak pressure-temperature-time (P-T-t) path, and predict the parageneses that felsic and mafic components of the massif crust should have formed under equilibrium conditions. Our model shows that peak P-T conditions of 2.6-2.8 GPa and 600-620 °C, representative of subduction to 90-100 km depth (assuming lithostatic pressure), were reached just 3 Myr after the onset of collision. These P-T-t constraints correlate well with those reported for similar UHP eclogite in the along-strike Kaghan Valley, Pakistan, suggesting that the northwest Himalaya contains dismembered remnants of a 400-km long UHP terrane comparable in size to the Western Gneiss Region, Norway, and the Dabie-Sulu belt, China. The extremely high pressures (up to 4.8 GPa) for peak metamorphism reported by some workers are likely to be unreliable due to thermobarometry having been performed on minerals that did not represent equilibrium assemblages. Furthermore, key high-P minerals predicted to form in subducted Tso Morari continental crust (e.g. jadeite, Mg-rich garnet) are absent from natural samples in the region, reflecting the widespread metastable preservation of lower-pressure protolith assemblages during subduction and exhumation. This result questions the reliability of geodynamic simulations of orogenesis that are commonly predicated on equilibrium metamorphism operating continuously throughout tectonic cycles.

  9. The depositional setting of the Late Quaternary sedimentary fill in southern Bannu basin, Northwest Himalayan fold and thrust belt, Pakistan. (United States)

    Farid, Asam; Khalid, Perveiz; Jadoon, Khan Zaib; Jouini, Mohammed Soufiane


    Geostatistical variogram and inversion techniques combined with modern visualization tools have made it possible to re-model one-dimensional electrical resistivity data into two-dimensional (2D) models of the near subsurface. The resultant models are capable of extending the original interpretation of the data to depict alluvium layers as individual lithological units within the 2D space. By tuning the variogram parameters used in this approach, it is then possible to visualize individual lithofacies and geomorphological features for these lithologic units. The study re-examines an electrical resistivity dataset collected as part of a groundwater study in an area of the Bannu basin in Pakistan. Additional lithological logs from boreholes throughout the area have been combined with the existing resistivity data for calibration. Tectonic activity during the Himalayan orogeny uplifted and generated significant faulting in the rocks resulting in the formation of a depression which subsequently has been filled with clay-silt and dirty sand facies typical of lacustrine and flood plain environments. Streams arising from adjacent mountains have reworked these facies which have been eroded and replaced by gravel-sand facies along channels. It is concluded that the sediments have been deposited as prograding fan shaped bodies, flood plain, and lacustrine deposits. Clay-silt facies mark the locations of paleo depressions or lake environments, which have changed position over time due to local tectonic activity and sedimentation. The Lakki plain alluvial system has thus formed as a result of local tectonic activity with fluvial erosion and deposition characterized by coarse sediments with high electrical resistivities near the mountain ranges and fine sediments with medium to low electrical resistivities towards the basin center.

  10. The depositional setting of the Late Quaternary sedimentary fill in southern Bannu basin, Northwest Himalayan fold and thrust belt, Pakistan

    KAUST Repository

    Farid, Asam M.


    Geostatistical variogram and inversion techniques combined with modern visualization tools have made it possible to re-model one-dimensional electrical resistivity data into two-dimensional (2D) models of the near subsurface. The resultant models are capable of extending the original interpretation of the data to depict alluvium layers as individual lithological units within the 2D space. By tuning the variogram parameters used in this approach, it is then possible to visualize individual lithofacies and geomorphological features for these lithologic units. The study re-examines an electrical resistivity dataset collected as part of a groundwater study in an area of the Bannu basin in Pakistan. Additional lithological logs from boreholes throughout the area have been combined with the existing resistivity data for calibration. Tectonic activity during the Himalayan orogeny uplifted and generated significant faulting in the rocks resulting in the formation of a depression which subsequently has been filled with clay-silt and dirty sand facies typical of lacustrine and flood plain environments. Streams arising from adjacent mountains have reworked these facies which have been eroded and replaced by gravel-sand facies along channels. It is concluded that the sediments have been deposited as prograding fan shaped bodies, flood plain, and lacustrine deposits. Clay-silt facies mark the locations of paleo depressions or lake environments, which have changed position over time due to local tectonic activity and sedimentation. The Lakki plain alluvial system has thus formed as a result of local tectonic activity with fluvial erosion and deposition characterized by coarse sediments with high electrical resistivities near the mountain ranges and fine sediments with medium to low electrical resistivities towards the basin center. © 2014 Springer International Publishing Switzerland.

  11. Soft sediment deformation associated with the East Patna Fault south of the Ganga River, northern India: Influence of the Himalayan tectonics on the southern Ganga plain (United States)

    Verma, Aditya K.; Pati, Pitambar; Sharma, Vijay


    The geomorphic, tectonic and seismic aspects of the Ganga plain have been studied by several workers in the recent decades. However, the northern part of this tectonically active plain has been the prime focus in most of the studies. The region to the south of the Ganga River requires necessary attention, especially, regarding the seismic activities. The region lying immediately south of the Outer Himalayas (i.e. the Ganga plain) responds to the stress regime of the Himalayan Frontal Thrust Zone by movement along the existing basement faults (extending from the Indian Peninsula) and creating new surface faults within the sediment cover as well. As a result, several earthquakes have been recorded along these basement faults, such as the great earthquakes of 1934 and 1988 associated with the East Patna Fault. Large zones of ground failure and liquefaction in north Bihar (close to the Himalayan front), have been recorded associated with these earthquakes. The present study reports the soft sediment deformation structures from the south Bihar associated with the prehistoric earthquakes near the East Patna Fault for the first time. The seismites have been observed in the riverine sand bed of the Dardha River close to the East Patna Fault. Several types of liquefaction-induced deformation structures such as pillar and pocket structure, thixotropic wedge, liquefaction cusps and other water escape structures have been identified. The location of the observed seismites within the deformed zone of the East Patna Fault clearly indicates their formation due to activities along this fault. However, the distance of the liquefaction site from the recorded epicenters suggests its dissociation with the recorded earthquakes so far and hence possibly relates to any prehistoric seismic event. The occurrence of the earthquakes of a magnitude capable of forming liquefaction structure in the southern Ganga plain indicates the transfer of stress regime far from the Himalayan front into

  12. Barnyard millet global core collection evaluation in the submontane Himalayan region of India using multivariate analysis

    Directory of Open Access Journals (Sweden)

    Salej Sood


    Full Text Available Barnyard millet (Echinochloa spp. is one of the most underresearched crops with respect to characterization of genetic resources and genetic enhancement. A total of 95 germplasm lines representing global collection were evaluated in two rainy seasons at Almora, Uttarakhand, India for qualitative and quantitative traits and the data were subjected to multivariate analysis. High variation was observed for days to maturity, five-ear grain weight, and yield components. The first three principal component axes explained 73% of the total multivariate variation. Three major groups were detected by projection of the accessions on the first two principal components. The separation of accessions was based mainly on trait morphology. Almost all Indian and origin-unknown accessions grouped together to form an Echinochloa frumentacea group. Japanese accessions grouped together except for a few outliers to form an Echinochloa esculenta group. The third group contained accessions from Russia, Japan, Cameroon, and Egypt. They formed a separate group on the scatterplot and represented accessions with lower values for all traits except basal tiller number. The interrelationships between the traits indicated that accessions with tall plants, long and broad leaves, longer inflorescences, and greater numbers of racemes should be given priority as donors or parents in varietal development initiatives. Cluster analysis identified two main clusters based on agro-morphological characters.

  13. Structure and tectonics of the Main Himalayan Thrust and associated faults from recent earthquake and seismic imaging studies using the NAMASTE array (United States)

    Karplus, M. S.; Pant, M.; Velasco, A. A.; Nabelek, J.; Kuna, V. M.; Sapkota, S. N.; Ghosh, A.; Mendoza, M.; Adhikari, L. B.; Klemperer, S. L.


    The India-Eurasia collision zone presents a significant earthquake hazard, as demonstrated by the recent, devastating April 25, 2015 M=7.8 Gorkha earthquake and the following May 12, 2015 M=7.3 earthquake. Important questions remain, including distinguishing possible geometries of the Main Himalayan Thrust (MHT), the role of other regional faults, the crustal composition and role of fluids in faulting, and the details of the rupture process, including structural causes and locations of rupture segmentation both along-strike and down-dip. These recent earthquakes and their aftershocks provide a unique opportunity to learn more about this collision zone. In June 2015, funded by NSF, we deployed the Nepal Array Measuring Aftershock Seismicity Trailing Earthquake (NAMASTE) array of 46 seismic stations distributed across eastern and central Nepal, spanning the region with most of the aftershocks. This array remained in place for 11 months from June 2015 to May 2016. We combine new results from this aftershock network in Nepal with previous geophysical and geological studies across the Himalaya to derive a new understanding of the tectonics of the Himalaya and southern Tibet in Nepal and surrounding countries. We focus on structure and composition of the Main Himalayan Thrust and compare this continent-continent subduction megathrust with megathrusts in other subduction zones.

  14. Forest cover change prediction using hybrid methodology of geoinformatics and Markov chain model: A case study on sub-Himalayan town Gangtok, India (United States)

    Mukhopadhyay, Anirban; Mondal, Arun; Mukherjee, Sandip; Khatua, Dipam; Ghosh, Subhajit; Mitra, Debasish; Ghosh, Tuhin


    In the Himalayan states of India, with increasing population and activities, large areas of forested land are being converted into other land-use features. There is a definite cause and effect relationship between changing practice for development and changes in land use. So, an estimation of land use dynamics and a futuristic trend pattern is essential. A combination of geospatial and statistical techniques were applied to assess the present and future land use/land cover scenario of Gangtok, the subHimalayan capital of Sikkim. Multi-temporal satellite imageries of the Landsat series were used to map the changes in land use of Gangtok from 1990 to 2010. Only three major land use classes (built-up area and bare land, step cultivated area, and forest) were considered as the most dynamic land use practices of Gangtok. The conventional supervised classification, and spectral indices-based thresholding using NDVI (Normalized Difference Vegetation Index) and SAVI (Soil Adjusted Vegetation Index) were applied along with the accuracy assessments. Markov modelling was applied for prediction of land use/land cover change and was validated. SAVI provides the most accurate estimate, i.e., the difference between predicted and actual data is minimal. Finally, a combination of Markov modelling and SAVI was used to predict the probable land-use scenario in Gangtok in 2020 AD, which indicted that more forest areas will be converted for step cultivation by the year 2020.

  15. Exploration of the diversity and associated health benefits of traditional pickles from the Himalayan and adjacent hilly regions of Indian subcontinent. (United States)

    Chakraborty, Rakhi; Roy, Swarnendu


    The Himalayas have provided shelter to the various communities for thousands of years and have remained the cradle for the origin of diverse cultures and traditions. The Himalayan belt is rich in biodiversity and have ushered mankind with numerous gifts for survival and existence. The art of pickling is believed to have developed independently among the different communities of this region. In this region, the main meal is supplemented with pickles or achar that not only adds flavour, but also enhances the value of the meal and often comes with inherent health benefits. The prime objective of this article was to enlist the diverse pickles that are being prepared and consumed by the different tribes and communities, and at the same time analyse the science behind pickle preparation and health benefits and concerns associated with pickles. We have enlisted about hundred monotypic pickles, that are prepared from single fruit or vegetable; but sometimes fungi such as Agaricus and ferns like Diplazium and Pteridium have also been used. Also, fish and meat pickles are common mostly in the Eastern Himalayan region. Traditional pickles constitute the medicinal values of the ingredients and other beneficial properties conferred by the associated microorganisms.

  16. Accessing the capability of TRMM 3B42 V7 to simulate streamflow during extreme rain events: Case study for a Himalayan River Basin (United States)

    Kumar, Brijesh; Lakshmi, Venkat


    The paper examines the quality of Tropical Rainfall Monitoring Mission (TRMM) 3B42 V7 precipitation product to simulate the streamflow using Soil Water Assessment Tool (SWAT) model for various rainfall intensities over the Himalayan region. The SWAT model has been set up for Gandak River Basin with 41 sub-basins and 420 HRUs. Five stream gauge locations are used to simulate the streamflow for a time span of 10 years (2000-2010). Daily streamflow for the simulation period is collected from Central Water Commission (CWC), India and Department of Hydrology and Meteorology (DHM), Nepal. The simulation results are found good in terms of Nash-Sutcliffe efficiency (NSE) {>}0.65, coefficient of determination (R2) {>}0.67 and Percentage Bias (PBIAS){}124.4 mm/d). The PBIAS and RSR show that TRMM simulated streamflow is suitable for moderate to heavy rainfall intensities. However, it does not perform well for light- and extremely-heavy rainfall intensities. The finding of the present work is useful for the problems related to water resources management, irrigation planning and hazard analysis over the Himalayan regions.

  17. Hardware Accelerated Sequence Alignment with Traceback

    Directory of Open Access Journals (Sweden)

    Scott Lloyd


    in a timely manner. Known methods to accelerate alignment on reconfigurable hardware only address sequence comparison, limit the sequence length, or exhibit memory and I/O bottlenecks. A space-efficient, global sequence alignment algorithm and architecture is presented that accelerates the forward scan and traceback in hardware without memory and I/O limitations. With 256 processing elements in FPGA technology, a performance gain over 300 times that of a desktop computer is demonstrated on sequence lengths of 16000. For greater performance, the architecture is scalable to more processing elements.

  18. Pre-monsoon air quality over Lumbini, a world heritage site along the Himalayan foothills (United States)

    Rupakheti, Dipesh; Adhikary, Bhupesh; Siva Praveen, Puppala; Rupakheti, Maheswar; Kang, Shichang; Singh Mahata, Khadak; Naja, Manish; Zhang, Qianggong; Panday, Arnico Kumar; Lawrence, Mark G.


    pollution transport to Lumbini. Fossil fuel combustion also contributed significantly, accounting for more than half of the ambient BC concentration according to aerosol spectral light absorption coefficients obtained in Lumbini. WRF-STEM, a regional chemical transport model, was used to simulate the meteorology and the concentrations of pollutants to understand the pollutant transport pathways. The model estimated values were ˜ 1. 5 to 5 times lower than the observed concentrations for CO and PM10, respectively. Model-simulated regionally tagged CO tracers showed that the majority of CO came from the upwind region of Ganges Valley. Model performance needs significant improvement in simulating aerosols in the region. Given the high air pollution level, there is a clear and urgent need for setting up a network of long-term air quality monitoring stations in the greater Lumbini region.

  19. Assessment of the performance of CORDEX-South Asia experiments for monsoonal precipitation over the Himalayan region during present climate: part I (United States)

    Ghimire, S.; Choudhary, A.; Dimri, A. P.


    Analysis of regional climate simulations to evaluate the ability of 11 Coordinated Regional Climate Downscaling Experiment in South Asia experiments (CORDEX-South Asia) along with their ensemble to produce precipitation from June to September (JJAS) over the Himalayan region have been carried out. These suite of 11 combinations come from 6 regional climate models (RCMs) driven with 10 initial and boundary conditions from different global climate models and are collectively referred here as 11 CORDEX South Asia experiments. All the RCMs use a similar domain and are having similar spatial resolution of 0.44° ( 50 km). The set of experiments are considered to study precipitation sensitivity associated with the Indian summer monsoon (ISM) over the study region. This effort is made as ISM plays a vital role in summertime precipitation over the Himalayan region which acts as driver for the sustenance of habitat, population, crop, glacier, hydrology etc. In addition, so far the summer monsoon precipitation climatology over the Himalayan region has not been studied with the help of CORDEX data. Thus this study is initiated to evaluate the ability of the experiments and their ensemble in reproducing the characteristics of summer monsoon precipitation over Himalayan region, for the present climate (1970-2005). The precipitation climatology, annual precipitation cycles and interannual variabilities from each simulation have been assessed against the gridded observational dataset: Asian Precipitation-Highly Resolved Observational Data Integration Towards the Evaluation of Water Resources for the given time period. Further, after the selection of the better performing experiment the frequency distribution of precipitation was also studied. In this study, an approach has also been made to study the degree of agreement among individual experiments as a way to quantify the uncertainty among them. The experiments though show a wide variation among themselves and individually over

  20. Lithosphere, crust and basement ridges across Ganga and Indus basins and seismicity along the Himalayan front, India and Western Fold Belt, Pakistan (United States)

    Ravi Kumar, M.; Mishra, D. C.; Singh, B.


    Himalaya in the Kangra reentrant where the great Kangra earthquake of 1905 was located. (ii) The Aravalli Delhi Mobile Belt (ADMB) and its margin faults extend to the Western Himalayan front via Delhi where it interacts with the Delhi-Lahore ridge and further north with the Himalayan front causing seismic activity. (iii) The Shahjahanpur and Faizabad ridges strike the Himalayan front in Central Nepal that do not show any enhanced seismicity which may be due to their being parts of the Bundelkhand craton as simple basement highs. (iv) The west and the east Patna faults are parts of transcontinental lineaments, such as Narmada-Son lineament. (v) The Munghyr-Saharsa ridge is fault controlled and interacts with the Himalayan front in the Eastern Nepal where Bihar-Nepal earthquakes of 1934 has been reported. Some of these faults/lineaments of the Indian continent find reflection in seismogenic lineaments of Himalaya like Everest, Arun, Kanchenjunga lineaments. A set of NW-SE oriented gravity highs along the Himalayan front and the Ganga and the Indus basins represents the folding of the basement due to compression as anticlines caused by collision of the Indian and the Asian plates. This study has also delineated several depressions like Saharanpur, Patna, and Purnia depressions.

  1. Downscale climate change scenarios over the Western Himalayan region of India using multi-generation CMIP experiments (United States)

    Das, Lalu; Meher, Jitendra K.; Akhter, Javed


    Assessing climate change information over the Western Himalayan Region (WHR) of India is crucial but challenging task due to its limited numbers of station data containing huge missing values. The issues of missing values of station data were replaced the Multiple Imputation Chained Equation (MICE) technique. Finally 22 numbers of rain gauge stations having continuous data during 1901-2005 and 16 numbers stations having continuous temperature data during 1969-2009 were considered as " reference stations for assessing rainfall and temperature trends in addition to evaluation of the GCMs available in the Coupled Model Intercomparison Project, Phase 3 (CMIP3) and phase 5 (CMIP5) over WRH. Station data indicates that the winter warming is higher and rapid (1.05oC) than other seasons and less warming in the post monsoon season in the last 41 years. Area averaged using 22 station data indicates that monsoon and winter rainfall has decreased by -5 mm and -320 mm during 1901-2000 while pre-monsoon and post monsoon showed an increasing trends of 21 mm and 13 mm respectively. Present study is constructed the downscaled climate change information at station locations (22 and 16 stations for rainfall and temperature respectively) over the WHR from the GCMs commonly available in the IPCC's different generations assessment reports namely 2nd, 3rd, 4th and 5th thereafter known as SAR, TAR, AR4 and AR5 respectively. Once the downscaled results are obtained for each generation model outputs, then a comparison of studies is carried out from the results of each generation. Finally an overall model improvement index (OMII) is developed using the downscaling results which is used to investigate the model improvement across generations as well as the improvement of downscaling results obtained from the empirical statistical downscaling (ESD) methods. In general, the results indicate that there is a gradual improvement of GCMs simulations as well as downscaling results across generation

  2. Cellulosic ethanol production via consolidated bioprocessing by a novel thermophilic anaerobic bacterium isolated from a Himalayan hot spring. (United States)

    Singh, Nisha; Mathur, Anshu S; Tuli, Deepak K; Gupta, Ravi P; Barrow, Colin J; Puri, Munish


    Cellulose-degrading thermophilic anaerobic bacterium as a suitable host for consolidated bioprocessing (CBP) has been proposed as an economically suited platform for the production of second-generation biofuels. To recognize the overall objective of CBP, fermentation using co-culture of different cellulolytic and sugar-fermenting thermophilic anaerobic bacteria has been widely studied as an approach to achieving improved ethanol production. We assessed monoculture and co-culture fermentation of novel thermophilic anaerobic bacterium for ethanol production from real substrates under controlled conditions. In this study, Clostridium sp. DBT-IOC-C19, a cellulose-degrading thermophilic anaerobic bacterium, was isolated from the cellulolytic enrichment cultures obtained from a Himalayan hot spring. Strain DBT-IOC-C19 exhibited a broad substrate spectrum and presented single-step conversion of various cellulosic and hemicellulosic substrates to ethanol, acetate, and lactate with ethanol being the major fermentation product. Additionally, the effect of varying cellulose concentrations on the fermentation performance of the strain was studied, indicating a maximum cellulose utilization ability of 10 g L -1 cellulose. Avicel degradation kinetics of the strain DBT-IOC-C19 displayed 94.6% degradation at 5 g L -1 and 82.74% degradation at 10 g L -1 avicel concentration within 96 h of fermentation. In a comparative study with Clostridium thermocellum DSM 1313, the ethanol and total product concentrations were higher by the newly isolated strain on pretreated rice straw at an equivalent substrate loading. Three different co-culture combinations were used on various substrates that presented two-fold yield improvement than the monoculture during batch fermentation. This study demonstrated the direct fermentation ability of the novel thermophilic anaerobic bacteria on various cellulosic and hemicellulosic substrates into ethanol without the aid of any exogenous enzymes

  3. Active folding of fluvial terraces across a `blind' Himalayan deformation front in the Kashmir Himalaya, northwest India. (United States)

    Gavillot, Y. G.; Meigs, A.; Rittenour, T. M.; Malik, M. O. A.


    In Kashmir, the Himalayan Frontal thrust (HFT) is blind, characterized by a broad fold, the Suruin-Mastargh anticline, and displays no emergent faults cutting either limb. A lack of knowledge of the rate of shortening and structural framework of the Suruin-Mastargh anticline hampers quantifying the earthquake potential for the deformation front. Our study utilized the geomorphic expression of dated deformed terraces on the Ujh River in Kashmir. Six terraces are recognized, and four yield multiple optically stimulated luminescence (OSL) and depth profiles terrigenous cosmogenic nuclides (TCN) ages between 53 ka and 0.4 ka. Vector fold restoration of long terrace profiles indicates a deformation pattern characterized by regional uplift across the anticlinal axis and back-limb, and by fold limb rotation on the forelimb. Differential uplift across the fold trace suggests localized deformation. Dip data and stratigraphic thicknesses suggest that a duplex structure is emplaced at depth along the basal décollement, folding the overlying roof thrust and Siwalik-Murree strata into a detachment-like fold. Localized faulting at the fold axis explains the asymmetrical fold geometry. Folding of the oldest dated terrace, suggests rock uplift rates across the Suruin-Mastargh anticline range between 1.8-2.5 mm/yr. Assuming a 25° dipping ramp for the blind structure on the basis of dip data constraints, the shortening rates across the Suruin-Mastargh anticline range between 3.8-5.4 mm/yr since 53 ka. Geodetic data indicate that an 11-12 mm/yr arc-normal shortening rate characterizes the interseismic strain accumulation across the plate boundary due to India-Tibet convergence. These data combined with rates of other active internal faults in the Kashmir Himalaya indicate that the Riasi fault accounts for the remainder 60% of the convergence not taken up by the Suruin-Mastargh anticline. We attribute a non-emergent thrust at the deformation front to reflect deformation controlled

  4. Subduction metamorphism in the Himalayan ultrahigh-pressure Tso Morari massif: An integrated geodynamic and petrological modelling approach (United States)

    Palin, Richard M.; Reuber, Georg S.; White, Richard W.; Kaus, Boris J. P.; Weller, Owen M.


    The Tso Morari massif is one of only two regions where ultrahigh-pressure (UHP) metamorphism of subducted crust has been documented in the Himalayan Range. The tectonic evolution of the massif is enigmatic, as reported pressure estimates for peak metamorphism vary from ∼2.4 GPa to ∼4.8 GPa. This uncertainty is problematic for constructing large-scale numerical models of the early stages of India-Asia collision. To address this, we provide new constraints on the tectonothermal evolution of the massif via a combined geodynamic and petrological forward-modelling approach. A prograde-to-peak pressure-temperature-time (P-T-t) path has been derived from thermomechanical simulations tailored for Eocene subduction in the northwestern Himalaya. Phase equilibrium modelling performed along this P-T path has described the petrological evolution of felsic and mafic components of the massif crust, and shows that differences in their fluid contents would have controlled the degree of metamorphic phase transformation in each during subduction. Our model predicts that peak P-T conditions of ∼2.6-2.8 GPa and ∼600-620 ∘C, representative of 90-100 km depth (assuming lithostatic pressure), could have been reached just ∼3 Myr after the onset of subduction of continental crust. This P-T path and subduction duration correlate well with constraints reported for similar UHP eclogite in the Kaghan Valley, Pakistan Himalaya, suggesting that the northwest Himalaya contains dismembered remnants of what may have been a ∼400-km-long UHP terrane comparable in size to the Western Gneiss Region, Norway, and the Dabie-Sulu belt, China. A maximum overpressure of ∼0.5 GPa was calculated in our simulations for a homogeneous crust, although small-scale mechanical heterogeneities may produce overpressures that are larger in magnitude. Nonetheless, the extremely high pressures for peak metamorphism reported by some workers (up to 4.8 GPa) are unreliable owing to conventional thermobarometry

  5. Genetic structure and diversity of indigenous rice (Oryza sativa) varieties in the Eastern Himalayan region of Northeast India. (United States)

    Choudhury, Baharul; Khan, Mohamed Latif; Dayanandan, Selvadurai


    The Eastern Himalayan region of Northeast (NE) India is home to a large number of indigenous rice varieties, which may serve as a valuable genetic resource for future crop improvement to meet the ever-increasing demand for food production. However, these varieties are rapidly being lost due to changes in land-use and agricultural practices, which favor agronomically improved varieties. A detailed understanding of the genetic structure and diversity of indigenous rice varieties is crucial for efficient utilization of rice genetic resources and for developing suitable conservation strategies. To explore the genetic structure and diversity of rice varieties in NE India, we genotyped 300 individuals of 24 indigenous rice varieties representing sali, boro, jum and glutinous types, 5 agronomically improved varieties, and one wild rice species (O. rufipogon) using seven SSR markers. A total of 85 alleles and a very high level of gene diversity (0.776) were detected among the indigenous rice varieties of the region. Considerable level of genetic variation was found within indigenous varieties whereas improved varieties were monoporphic across all loci. The comparison of genetic diversity among different types of rice revealed that sali type possessed the highest gene diversity (0.747) followed by jum (0.627), glutinous (0.602) and boro (0.596) types of indigenous rice varieties, while the lowest diversity was detected in agronomically improved varieties (0.459). The AMOVA results showed that 66% of the variation was distributed among varieties indicating a very high level of genetic differentiation in rice varieties in the region. Two major genetically defined clusters corresponding to indica and japonica groups were detected in rice varieties of the region. Overall, traditionally cultivated indigenous rice varieties in NE India showed high levels of genetic diversity comparable to levels of genetic diversity reported from wild rice populations in various parts of the

  6. Ethnobotanical survey of medicinally important shrubs and trees of Himalayan region of Azad Jammu and Kashmir, Pakistan. (United States)

    Rashid, Sofia; Ahmad, Mushtaq; Zafar, Muhammad; Sultana, Shazia; Ayub, Muhammad; Khan, Mir Ajab; Yaseen, Ghulam


    Present study was commenced with an aim to document the indigenous knowledge of medicinally important shrubs and trees of Himalayan region of Azad Jammu and Kashmir, Pakistan. This is the first contribution to the quantitative ethnobotany of this region, as no reported data focusing on shrubs and trees from the area have been published. Study reported the ethnobotanical significance of medicinal plants for the treatment of various diseases. Study was conducted during 2012-2014 following standard ethnobotanical methods. The ethnomedicinal data was collected through informed consent semi- structured interviews of 160 key informants. Documented data was analyzed by using quantitative indices of informant consensus factor (ICF), fidelity level (FL), use value (UV) and relative frequency citation (RFC). A total of 73 shrub and tree species belonging to 56 genera and 37 families were reported to be used ethnomedicinally for the treatment of various ailments. Medicinal plant diversity showed that Rosaceae was dominating family with (9 spp.) followed by Moraceae (7 spp.), Euphorbiaceae, Mimosaceae, Pinaceae, Rhamnaceae (4 spp. each), Oleaceae (3 spp.), Apocynaceae, Caesalpinaceae, Ebenaceae, Fagaceae, Lythraceae, Papilionaceae, Acanthaceae, Verbenaceae (2 spp. each) while remaining 22 families were represented by one species each. Leaves (23%) were highly utilized plant parts, followed by fruits (22%), bark (18%), seeds (10%), roots (9%), flowers (8%), whole plant and aerial parts (4% each) and stem (2%). Modes of preparation fall into 14 categories including powder (33 reports) followed by decoction (29 reports), paste (22 reports), juice (18 reports), infusion (12 reports), raw (8 reports), extract and latex (5 reports each), gum and oil (4 reports each), fresh part and pulp (2 reports each), chewed and cooked (1 report each). The highest FIC was recorded for Gastro-intestinal disorders (0.58) followed by nail, skin and hair disorders (0.44). Maximum fidelity level (FL

  7. Changes in the Mountain Cryosphere and Potential Risks to Downstream Communities: Insights from the Indian Himalayan Region (United States)

    Allen, Simon; Ballesteros, Juan Antonio; Huggel, Christian; Linsbauer, Andreas; Mal, Suraj; Singh Rana, Ranbir; Singh Randhawa, Surjeet; Ruiz-Villanueva, Virginia; Salzmann, Nadine; Singh Samant, Sher; Stoffel, Markus


    Mountain environments around the world are often considered to be amongst the most sensitive to the impacts of climate change. For people living in mountain communities, there are clear challenges to be faced as their livelihoods and subsistence are directly dependent on their surrounding natural environment. But what of the wider implications for societies and large urban settlements living downstream - why should they care about the climate-driven changes occurring potentially hundreds of kilometers away in the snow and ice capped mountains? In this contribution we address this question, drawing on studies and experiences gained within joint Indo-Swiss research collaborations focused on the Indian Himalayan states of Himachal Pradesh and Uttarakhand. With the Intergovernmental Panel on Climate Change currently embarking on the scoping of their 6th Assessment Cycle, which includes a planned Special Report on Oceans and the Cryosphere, this contribution provides a timely reminder of the importance of mountain regions, and potential far-reaching consequences of changes in the mountain cryosphere. Our studies highlight several key themes which link the mountain environment to the lowland populated areas, including the role of the mountain cryosphere as a water source, far-reaching hazards and disasters that can originate from mountain regions, the role of mountains in providing essential ecosystem services, the economic importance of tourism in mountain regions, and the importance of transportation routes which pass through mountain environments. These themes are intricately linked, as for example demonstrated during the 2013 Uttarakhand flood disaster where many of the approximately 6000 fatalities were tourists visiting high mountain pilgrimage sites. As a consequence of the disaster, tourists stayed away during subsequent seasons with significant economic impacts felt across the State. In Himachal Pradesh, a key national transportation corridor is the Rohtang pass

  8. Shotgun protein sequencing.

    Energy Technology Data Exchange (ETDEWEB)

    Faulon, Jean-Loup Michel; Heffelfinger, Grant S.


    A novel experimental and computational technique based on multiple enzymatic digestion of a protein or protein mixture that reconstructs protein sequences from sequences of overlapping peptides is described in this SAND report. This approach, analogous to shotgun sequencing of DNA, is to be used to sequence alternative spliced proteins, to identify post-translational modifications, and to sequence genetically engineered proteins.

  9. Multimodal sequence learning. (United States)

    Kemény, Ferenc; Meier, Beat


    While sequence learning research models complex phenomena, previous studies have mostly focused on unimodal sequences. The goal of the current experiment is to put implicit sequence learning into a multimodal context: to test whether it can operate across different modalities. We used the Task Sequence Learning paradigm to test whether sequence learning varies across modalities, and whether participants are able to learn multimodal sequences. Our results show that implicit sequence learning is very similar regardless of the source modality. However, the presence of correlated task and response sequences was required for learning to take place. The experiment provides new evidence for implicit sequence learning of abstract conceptual representations. In general, the results suggest that correlated sequences are necessary for implicit sequence learning to occur. Moreover, they show that elements from different modalities can be automatically integrated into one unitary multimodal sequence. Copyright © 2015 Elsevier B.V. All rights reserved.

  10. Sequence Read Archive (SRA) (United States)

    U.S. Department of Health & Human Services — The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome...

  11. The Great Himalayan Game

    DEFF Research Database (Denmark)

    Schmidt, Johannes Dragsbæk; Thapa, Manish

    The aim of this paper is to explore the rivalry between India and China and how it impacts Nepal in geo-strategic and geo-political terms both theoretically, conceptually and empirically. The foreign policy rivalry between India and China appears not only to influence investment and trade decisions...

  12. Chamera: A Himalayan experience

    International Nuclear Information System (INIS)

    Havercroft, P.E.H.


    The 540 MW Chamera hydroelectric project is located on the Ravi River in the foothills of the Himalayas 500 km north of Delhi. The Chamera Constructors Consortium is made up of a joint venture of SNC Inc., Acres International, Marine Industries Limited and General Electric Canada. The consortium provides engineering, procurement, and construction management services, and supplies turbines and gates, generators and associated electrical equipment. The experience of the consortium in dealing with the Indian Government is detailed. A multi-envelope bidding system was used, with the lowest cost, technically acceptable bid receiving the contract. Misunderstandings can arise due to different perceptions of the bidding process between Canadian companies and the National Hydroelectric Power Corporation (NHPC) of the Indian government, with NHPC taking a more formal approach in contractual dealings. Export paperwork was frequently in error leading to delays in passage of goods through Indian customs. With the liberalization of the Indian trade laws there is a potential for Canada to supply a significant quantity of equipment for India's planned 38,000 MW of hydroelectric expansion. 11 figs., 2 tabs

  13. Ground-Penetrating Radar Investigations along Hajipur Fault: Himalayan Frontal Thrust—Attempt to Identify Near Subsurface Displacement, NW Himalaya, India

    Directory of Open Access Journals (Sweden)

    Javed N. Malik


    Full Text Available The study area falls in the mesoseismal zone of 1905 Kangra earthquake (Mw 7.8. To identify appropriate trenching site for paleoseismic investigation and to understand the faulting geometry, ground-penetrating radar (GPR survey was conducted across a Hajipur Fault (HF2 scarp, a branching out fault of Himalayan Frontal Thrust (HFT in a foot hill zone of NW Himalaya. Several 2D and 3D profiles were collected using 200 MHz antenna with SIR 3000 unit. A 2D GPR profile collected across the HF2 scarp revealed prominent hyperbolas and discontinuous-warped reflections, suggesting a metal pipe and a zone of deformation along a low-angle thrust fault, respectively. The 3D profile revealed remarkable variation in dip of the fault plane and pattern of deformation along the strike of the fault.

  14. Invasion establishment and habitat suitability of Chromolaena odorata (L. King and Robinson over time and space in the western Himalayan forests of India

    Directory of Open Access Journals (Sweden)

    Gautam Mandal


    Full Text Available Habitat suitability assessment of the invasive species Chromolaena odorata (L. King and Robinson from Himalayan forests reveals some interesting findings and conclusions. At different study sites, 29 of 72 species were exotic and invasive and comprised 21 genera and eight families. Indigenous species accounted for 59% of the total species and comprised 26 genera and 11 families. Perennials outnumbered the annuals in all study sites. Chromolaena odorata and Lantana camara L. were the only invasive species that were common to all sites with high importance value index values. The present work reveals that sites with high biotic pressure, maximum temperature variation, open forest canopy, and free from herbivory are the most suitable habitat for the growth of C. odorata. An elevated level of phosphorus, potassium, magnesium, soil organic matter, and nitrogen and acidic soil in all invaded sites are possible reasons for further invasion of C. odorata.

  15. The dynamics of the species into collections of the North American and the Himalayan hills in Alpinarium of Peter the Great Botanical Garden

    Directory of Open Access Journals (Sweden)

    Tkachenko Kirill


    Full Text Available Botanical gardens' collections of living plants are valuable not only because of their exhibitions, but also because of the data accumulated during introductions of new plants. Inventory allows to collect valuable material about introduction of different types of plants (species and taxa. Analysis of the available information allows to select and recommend advanced species (genus complex for the needs of urbane floristics; the perennial herbaceous plants of mountain areas come in the first place. A new list of advanced ornamental and household plants is introduced in the article. The recommended plants can be used for urban gardening and various groundscape works, and for creation of seed orchards in the neighboring regions. The study of introduction results helps not only to determine the advanced species (and taxa, but to understand which spices will not be able to survive a long time in the new conditions (mainly because of the climate, for example in the North-West of Russia. Over the past 60 years, around 385 plants of 61 families has been introduced at the North American and Himalayan rock gardens of the Peter the Great Botanical Garden. In the 60s of the 20th century, the exposition of these rock gardens had nearly 130 species from 51 families, 20 years later – 254 plants of 55 families. In the beginning of the 21st century, there were 249 taxa of the 52 families. Since 2010, the Alpinarium had to undergo a major reconstruction following the restoration and addition of the collection. As of 2015, the exposition of the North American and Himalayan rock gardens has 200 species of 54 families.

  16. Along-Strike Differences of the Main Himalayan Thrust and Deformation within the Indian Crust: Insights from Seismicity and Seismic Velocities in Bhutan and its Foreland (United States)

    Diehl, T.; Singer, J.; Hetényi, G.; Kissling, E. H.; Clinton, J. F.


    The seismicity of Bhutan is characterized by the apparent lack of great earthquakes and a significantly lower activity compared to most other parts of the Himalayan arc. To better understand the underlying mechanisms of this anomalously low activity and to relate it with possible along-strike differences in the structure of the orogenic belt, a temporary network with up to 38 broadband seismometers was installed in Bhutan between January 2013 and November 2014. In this work we present a catalog of local and regional earthquakes detected and located with the GANSSER network complemented by regional stations in India, Bangladesh, and China. State-of-the-art data analysis and earthquake location procedures were applied to derive a high-precision earthquake catalog of Bhutan and surrounding regions. Focal mechanisms from regional moment tensor inversions and first-motion polarities complement the earthquake catalog. In the vicinity of the Shumar-Kuru Chu Spur in East Bhutan, seismicity forms a moderately dipping structure at about 12 km depth, which we associate with the Main Himalayan Thrust (MHT). North of 27.6°N the dip of the structure steepens, which can be interpreted as a ramp along the MHT. In West Bhutan seismicity occurs at depths of 20 to 40 km and receiver function images indicate that seismicity occurs in the underthrusting Indian crust rather than on the MHT. The highest seismic activity is clustered along the Goalpara Lineament, a dextral NE-SW striking shear zone in southwest Bhutan, which appears to connect to the western edge of the Shillong Plateau in the foreland. Focal depths indicate that this shear zone is located at depths of 20-30 km and therefore in the underthrusting Indian crust. Preliminary results of a 3D local earthquake tomography show substantial differences in the uppermost crust between east and west Bhutan. Consistent with our receiver function images, the results also indicate a thinning of the crustal root towards eastern Bhutan.

  17. Linking microstructures, petrology and in situ U-(Th)-Pb geochronology to constrain P-T-t-D evolution of the Greather Himalyan Sequences in Western Nepal (Central Himalaya) (United States)

    Iaccarino, Salvatore; Montomoli, Chiara; Carosi, Rodolfo; Langone, Antonio


    Last advances in forward modelling of metamorphic rocks and into the understanding of accessories minerals behaviour, suitable for geochronology (e.g. zircon and monazite), during metamorphism, bring new insights for understanding the evolution of metamorphic tectonites during orogenic cycles (Williams and Jercinovic, 2012 and reference therein). One of the best exposure of high- to medium grade- metamorphic rocks, is represented by the Greater Himalayan Sequence (GHS) in the Himalayan Belt, one of the most classic example of collisional orogen. Recent field work in Mugu Karnali valley, Western Nepal (Central Himalaya), identified a compressional top to the South ductile shear zone within the core of the GHS, named Magri Shear Zone (MSZ), developed in a high temperature regime as testified by quartz microstructures and syn-kinematic growth of sillimanite. In order to infer the tectono-metamorphic meaning of MSZ, a microstructural study coupled with pseudosection modelling and in situ U-(Th)-Pb monazite geochronology was performed on selected samples from different structural positions. Footwall sample constituted by (Grt + St ± Ky) micaschist shows a prograde garnet growth (cores to inner rims zoning), from ~500°C, ~0.60GPa (close to garnet-in curve) to ~580°C, ~1.2 GPa temporal constrained between 21-18 Ma, by medium Y cores to very low Y mantles monazite micro-chemical/ages domain . In this sample garnet was still growing during decompression and heating at ~640°C, ~0.75 GPa (rims), and later starts to be consumed, in conjunction with staurolite growth at 15-13 Ma, as revealed by high Y rims monazite micro-chemical/ages domain. Hanging-wall mylonitic samples have a porphyroclastic texture, with garnet preserve little memory of prograde path. Garnet near rim isoplets and matrix minerals intersect at ~700°C and ~0.70 GPa. A previous higher P stage, at ~1.10 GPa ~600°C, is testified by cores of larger white mica porhyroclasts. Prograde zoned allanite (Janots

  18. Nonparametric combinatorial sequence models. (United States)

    Wauthier, Fabian L; Jordan, Michael I; Jojic, Nebojsa


    This work considers biological sequences that exhibit combinatorial structures in their composition: groups of positions of the aligned sequences are "linked" and covary as one unit across sequences. If multiple such groups exist, complex interactions can emerge between them. Sequences of this kind arise frequently in biology but methodologies for analyzing them are still being developed. This article presents a nonparametric prior on sequences which allows combinatorial structures to emerge and which induces a posterior distribution over factorized sequence representations. We carry out experiments on three biological sequence families which indicate that combinatorial structures are indeed present and that combinatorial sequence models can more succinctly describe them than simpler mixture models. We conclude with an application to MHC binding prediction which highlights the utility of the posterior distribution over sequence representations induced by the prior. By integrating out the posterior, our method compares favorably to leading binding predictors.

  19. Technical concept for a greater-confinement-disposal test facility

    International Nuclear Information System (INIS)

    Hunter, P.H.


    Greater confinement disposal (GCO) has been defined by the National Low-Level Waste Program as the disposal of low-level waste in such a manner as to provide greater containment of radiation, reduce potential for migration or dispersion or radionuclides, and provide greater protection from inadvertent human and biological intrusions in order to protect the public health and safety. This paper discusses: the need for GCD; definition of GCD; advantages and disadvantages of GCD; relative dose impacts of GCD versus shallow land disposal; types of waste compatible with GCD; objectives of GCD borehole demonstration test; engineering and technical issues; and factors affecting performance of the greater confinement disposal facility

  20. Genome Sequence Databases (Overview): Sequencing and Assembly

    Energy Technology Data Exchange (ETDEWEB)

    Lapidus, Alla L.


    From the date its role in heredity was discovered, DNA has been generating interest among scientists from different fields of knowledge: physicists have studied the three dimensional structure of the DNA molecule, biologists tried to decode the secrets of life hidden within these long molecules, and technologists invent and improve methods of DNA analysis. The analysis of the nucleotide sequence of DNA occupies a special place among the methods developed. Thanks to the variety of sequencing technologies available, the process of decoding the sequence of genomic DNA (or whole genome sequencing) has become robust and inexpensive. Meanwhile the assembly of whole genome sequences remains a challenging task. In addition to the need to assemble millions of DNA fragments of different length (from 35 bp (Solexa) to 800 bp (Sanger)), great interest in analysis of microbial communities (metagenomes) of different complexities raises new problems and pushes some new requirements for sequence assembly tools to the forefront. The genome assembly process can be divided into two steps: draft assembly and assembly improvement (finishing). Despite the fact that automatically performed assembly (or draft assembly) is capable of covering up to 98% of the genome, in most cases, it still contains incorrectly assembled reads. The error rate of the consensus sequence produced at this stage is about 1/2000 bp. A finished genome represents the genome assembly of much higher accuracy (with no gaps or incorrectly assembled areas) and quality ({approx}1 error/10,000 bp), validated through a number of computer and laboratory experiments.

  1. Assessing Human Impacts on the Greater Akaki River, Ethiopia ...

    African Journals Online (AJOL)

    We assessed the impacts of human activities on the Greater Akaki River using physicochemical parameters and macroinvertebrate metrics. Physicochemical samples and macroinvertebrates were collected bimonthly from eight sites established on the Greater Akaki River from February 2006 to April 2006. Eleven metrics ...

  2. Comparative Education in Greater China: Contexts, Characteristics, Contrasts and Contributions. (United States)

    Bray, Mark; Qin, Gui


    The evolution of comparative education in Greater China (mainland China, Taiwan, Hong Kong, and Macau) has been influenced by size, culture, political ideologies, standard of living, and colonialism. Similarities and differences in conceptions of comparative education are identified among the four components and between Greater China and other…

  3. Greater temperature sensitivity of plant phenology at colder sites

    DEFF Research Database (Denmark)

    Prevey, Janet; Vellend, Mark; Ruger, Nadja


    Warmer temperatures are accelerating the phenology of organisms around the world. Temperature sensitivity of phenology might be greater in colder, higher latitude sites than in warmer regions, in part because small changes in temperature constitute greater relative changes in thermal balance...

  4. Breeding of Greater and Lesser Flamingos at Sua Pan, Botswana ...

    African Journals Online (AJOL)

    to fledging was unknown owing to the rapid drying of the pan in late March 1999. No Greater Flamingo breeding was seen that season. Exceptional flooding during 1999–2000 produced highly favourable breeding conditions, with numbers of Greater and Lesser Flamingos breeding estimated to be 23 869 and 64 287 pairs, ...

  5. Surgical anatomy of greater occipital nerve and its relation to ...

    African Journals Online (AJOL)

    Introduction: The knowledge of the anatomy of greater occipital nerve and its relation to occipital artery is important for the surgeon. Blockage or surgical release of greater occipital nerve is clinically effective in reducing or eliminating chronic migraine symptoms. Aim: The aim of this research was to study the anatomy of ...

  6. Surgical anatomy of greater occipital nerve and its relation to ...

    African Journals Online (AJOL)

    Nancy Mohamed El Sekily


    Aug 19, 2014 ... Abstract Introduction: The knowledge of the anatomy of greater occipital nerve and its relation to occipital artery is important for the surgeon. Blockage or surgical release of greater occipital nerve is clinically effective in reducing or eliminating chronic migraine symptoms. Aim: The aim of this research was to ...


    NARCIS (Netherlands)

    Hudalah, Delik; Viantari, Dimitra; Firman, Tommy; Woltjer, Johan


    Industrial land development has become a key feature of urbanization in Greater Jakarta, one of the largest metropolitan areas in Southeast Asia. Following Suharto's market-oriented policy measures in the late 1980s, private developers have dominated the land development projects in Greater Jakarta.

  8. Strategies for Talent Management: Greater Philadelphia Companies in Action (United States)

    Council for Adult and Experiential Learning (NJ1), 2008


    Human capital is one of the critical issues that impacts the Greater Philadelphia region's ability to grow and prosper. The CEO Council for Growth (CEO Council) is committed to ensuring a steady and talented supply of quality workers for this region. "Strategies for Talent Management: Greater Philadelphia Companies in Action" provides…

  9. Long sequence correlation coprocessor (United States)

    Gage, Douglas W.


    A long sequence correlation coprocessor (LSCC) accelerates the bitwise correlation of arbitrarily long digital sequences by calculating in parallel the correlation score for 16, for example, adjacent bit alignments between two binary sequences. The LSCC integrated circuit is incorporated into a computer system with memory storage buffers and a separate general purpose computer processor which serves as its controller. Each of the LSCC's set of sequential counters simultaneously tallies a separate correlation coefficient. During each LSCC clock cycle, computer enable logic associated with each counter compares one bit of a first sequence with one bit of a second sequence to increment the counter if the bits are the same. A shift register assures that the same bit of the first sequence is simultaneously compared to different bits of the second sequence to simultaneously calculate the correlation coefficient by the different counters to represent different alignments of the two sequences.

  10. Roles of repetitive sequences

    Energy Technology Data Exchange (ETDEWEB)

    Bell, G.I.


    The DNA of higher eukaryotes contains many repetitive sequences. The study of repetitive sequences is important, not only because many have important biological function, but also because they provide information on genome organization, evolution and dynamics. In this paper, I will first discuss some generic effects that repetitive sequences will have upon genome dynamics and evolution. In particular, it will be shown that repetitive sequences foster recombination among, and turnover of, the elements of a genome. I will then consider some examples of repetitive sequences, notably minisatellite sequences and telomere sequences as examples of tandem repeats, without and with respectively known function, and Alu sequences as an example of interspersed repeats. Some other examples will also be considered in less detail.

  11. Anomaly Detection in Sequences (United States)

    National Aeronautics and Space Administration — We present a set of novel algorithms which we call sequenceMiner, that detect and characterize anomalies in large sets of high-dimensional symbol sequences that...

  12. DNA sequencing conference, 2

    Energy Technology Data Exchange (ETDEWEB)

    Cook-Deegan, R.M. [Georgetown Univ., Kennedy Inst. of Ethics, Washington, DC (United States); Venter, J.C. [National Inst. of Neurological Disorders and Strokes, Bethesda, MD (United States); Gilbert, W. [Harvard Univ., Cambridge, MA (United States); Mulligan, J. [Stanford Univ., CA (United States); Mansfield, B.K. [Oak Ridge National Lab., TN (United States)


    This conference focused on DNA sequencing, genetic linkage mapping, physical mapping, informatics and bioethics. Several were used to study this sequencing and mapping. This article also discusses computer hardware and software aiding in the mapping of genes.

  13. sequenceMiner algorithm (United States)

    National Aeronautics and Space Administration — Detecting and describing anomalies in large repositories of discrete symbol sequences. sequenceMiner has been open-sourced! Download the file below to try it out....

  14. EGNAS: an exhaustive DNA sequence design algorithm

    Directory of Open Access Journals (Sweden)

    Kick Alfred


    Full Text Available Abstract Background The molecular recognition based on the complementary base pairing of deoxyribonucleic acid (DNA is the fundamental principle in the fields of genetics, DNA nanotechnology and DNA computing. We present an exhaustive DNA sequence design algorithm that allows to generate sets containing a maximum number of sequences with defined properties. EGNAS (Exhaustive Generation of Nucleic Acid Sequences offers the possibility of controlling both interstrand and intrastrand properties. The guanine-cytosine content can be adjusted. Sequences can be forced to start and end with guanine or cytosine. This option reduces the risk of “fraying” of DNA strands. It is possible to limit cross hybridizations of a defined length, and to adjust the uniqueness of sequences. Self-complementarity and hairpin structures of certain length can be avoided. Sequences and subsequences can optionally be forbidden. Furthermore, sequences can be designed to have minimum interactions with predefined strands and neighboring sequences. Results The algorithm is realized in a C++ program. TAG sequences can be generated and combined with primers for single-base extension reactions, which were described for multiplexed genotyping of single nucleotide polymorphisms. Thereby, possible foldback through intrastrand interaction of TAG-primer pairs can be limited. The design of sequences for specific attachment of molecular constructs to DNA origami is presented. Conclusions We developed a new software tool called EGNAS for the design of unique nucleic acid sequences. The presented exhaustive algorithm allows to generate greater sets of sequences than with previous software and equal constraints. EGNAS is freely available for noncommercial use at

  15. Fractures of the greater trochanter following total hip replacement. (United States)

    Brun, Ole-Christian L; Maansson, Lukas


    We studied the incidence of greater trochanteric fractures at our department following THR. In all we examined 911 patients retrospectively and found the occurance of a greater trochanteric fracture to be 3%. Patients with fractures had significantly poorer outcome on Oxford Hip score, Pain VAS, Satisfaction VAS and EQ-5D compared to THR without fractures. Greater trochanteric fracture following THR is one of the most common complications following THR. It has previously been thought to have little impact on the overall outcome following THR, but our study suggests otherwise.

  16. Transverse tectonic structural elements across Himalayan mountain front, eastern Arunachal Himalaya, India: Implication of superposed landform development on analysis of neotectonics (United States)

    Bhakuni, S. S.; Luirei, Khayingshing; Kothyari, Girish Ch.; Imsong, Watinaro


    Structural and morphotectonic signatures in conjunction with the geomorphic indices are synthesised to trace the role of transverse tectonic features in shaping the landforms developed along the frontal part of the eastern Arunachal sub-Himalaya. Mountain front sinuosity (Smf) index values close to one are indicative of the active nature of the mountain front all along the eastern Arunachal Himalaya, which can be directly attributed to the regional uplift along the Himalayan Frontal Thrust (HFT). However, the mountain front is significantly sinusoidal around junctions between HFT/MBT (Main Boundary Thrust) and active transverse faults. The high values of stream length gradient (SL) and stream steepness (Ks) indices together with field evidence of fault scarps, offset of terraces, and deflection of streams are markers of neotectonic uplift along the thrusts and transverse faults. This reactivation of transverse faults has given rise to extensional basins leading to widening of the river courses, providing favourable sites for deposition of recent sediments. Tectonic interactions of these transverse faults with the Himalayan longitudinal thrusts (MBT/HFT) have segmented the mountain front marked with varying sinuosity. The net result is that a variety of tectonic landforms recognized along the mountain front can be tracked to the complex interactions among the transverse and longitudinal tectonic elements. Some distinctive examples are: in the eastern extremity of NE Himalaya across the Dibang River valley, the NW-SE trending mountain front is attenuated by the active Mishmi Thrust that has thrust the Mishmi crystalline complex directly over the alluvium of the Brahmaputra plains. The junction of the folded HFT and Mishmi Thrust shows a zone of brecciated and pulverized rocks along which transverse axial planar fracture cleavages exhibit neotectonic activities in a transverse fault zone coinciding with the Dibang River course. Similarly, the transverse faults cut the

  17. Prey selection by a reintroduced lion population in the Greater ...

    African Journals Online (AJOL)

    Prey selection by a reintroduced lion population in the Greater Makalali Conservancy, South Africa. Dave Druce, Heleen Genis, Jonathan Braak, Sophie Greatwood, Audrey Delsink, Ross Kettles, Luke Hunter, Rob Slotow ...

  18. LiveDiverse: Case study area, Greater Kruger South Africa

    CSIR Research Space (South Africa)

    Nortje, Karen


    Full Text Available Livelihoods and Biodiversity in Developing Countries Case study area: Greater Kruger, South Africa January 2011 Kolhapur, India Where are we? HARDSHIP LIVELIHOODS NATURE & BIODIVERSITY BELIEFS & CULTURAL PRACTISE threesansinv foursansinv onesansinv...

  19. Exploration of the Energy Efficiency of the Greater London Authority ...

    African Journals Online (AJOL)

    GLA Building/City Hall) ... Journal Home > Vol 11, No 2 (2007) > ... The Greater London Authority building was acclaimed as being energy efficient, with claims of 75 % reduction in its annual energy consumption compared to a high specification ...

  20. Molecular insights into the biology of Greater Sage-Grouse (United States)

    Oyler-McCance, Sara J.; Quinn, Thomas W.


    Recent research on Greater Sage-Grouse (Centrocercus urophasianus) genetics has revealed some important findings. First, multiple paternity in broods is more prevalent than previously thought, and leks do not comprise kin groups. Second, the Greater Sage-Grouse is genetically distinct from the congeneric Gunnison sage-grouse (C. minimus). Third, the Lyon-Mono population in the Mono Basin, spanning the border between Nevada and California, has unique genetic characteristics. Fourth, the previous delineation of western (C. u. phaios) and eastern Greater Sage-Grouse (C. u. urophasianus) is not supported genetically. Fifth, two isolated populations in Washington show indications that genetic diversity has been lost due to population declines and isolation. This chapter examines the use of molecular genetics to understand the biology of Greater Sage-Grouse for the conservation and management of this species and put it into the context of avian ecology based on selected molecular studies.

  1. Greater saphenous vein anomaly and aneurysm with subsequent pulmonary embolism


    Ma, Truong; Kornbau, Craig


    Abstract Venous aneurysms often present as painful masses. They can present either in the deep or superficial venous system. Deep venous system aneurysms have a greater risk of thromboembolism. Though rare, there have been case reports of superficial aneurysms and thrombus causing significant morbidity such as pulmonary embolism. We present a case of an anomalous greater saphenous vein connection with an aneurysm and thrombus resulting in a pulmonary embolism. This is the only reported case o...


    Directory of Open Access Journals (Sweden)

    A.V. Nekrutov


    Full Text Available The review analyzes the structure organization and pathophysiological age specificities of the greater omentum, which determine its uniqueness and functional diversity in a child's organism. the article discusses protective functions of the organ, its role in the development of post operative complications of children, and the usage in children's reconstructive plastic surgery.Key words: greater omentum, omentitis, of post operative complications, children.

  3. Socio-economic considerations of cleaning Greater Vancouver's air

    International Nuclear Information System (INIS)


    Socio-economic considerations of better air quality on the Greater Vancouver population and economy were discussed. The purpose of the study was to provide socio-economic information to staff and stakeholders of the Greater Vancouver Regional District (GVRD) who are participating in an Air Quality Management Plan (AQMP) development process and the Sustainable Region Initiative (SRI) process. The study incorporated the following methodologies: identification and review of Canadian, American, and European quantitative socio-economic, cost-benefit, cost effectiveness, competitiveness and health analyses of changes in air quality and measures to improve air quality; interviews with industry representatives in Greater Vancouver on competitiveness impacts of air quality changes and ways to improve air quality; and a qualitative analysis and discussion of secondary quantitative information that identifies and evaluates socio-economic impacts arising from changes in Greater Vancouver air quality. The study concluded that for the Greater Vancouver area, the qualitative analysis of an improvement in Greater Vancouver air quality shows positive socio-economic outcomes, as high positive economic efficiency impacts are expected along with good social quality of life impacts. 149 refs., 30 tabs., 6 appendices

  4. Impact of land-use and climatic changes on hydrology of the Himalayan Basin: A case study of the Kosi Basin (United States)

    Sharma, Keshav Prasad


    Land-use and climatic changes are of major concern in the Himalayan region because of their potential impacts on a predominantly agriculture-based economy and a regional hydrology dominated by strong seasonality. Such concerns are not limited to any particular basin but exist throughout the region including the downstream plain areas. As a representative basin of the Himalayas, we studied the Kosi basin (54,000 km2) located in the mountainous area of the central Himalayan region. We analyzed climatic and hydrologic information to assess the impacts of existing and potential future land-use and climatic changes over the basin. The assessment of anthropogenic inputs showed that the population grew at a compound growth rate of about one percent per annum over the basin during the last four decades. The comparison of land-use data based on the surveys made in the 1960s, and the surveys of 1978-79 did not reveal noticeable trends in land-use change. Analysis of meteorological and hydrological trends using parametric and nonparametric statistics for monthly data from 1947 to 1993 showed some increasing tendency for temperature and precipitation. Statistical tests of hydrological trends indicated an overall decrease of discharge along mainstem Kosi River and its major tributaries. The decreasing trends of streamflow were more significant during low-flow months. Statistical analysis of homogeneity showed that the climatological as well as the hydrological trends were more localized in nature lacking distinct basinwide significance. Statistical analysis of annual sediment time series, available for a single station on the Kosi River did not reveal a significant trend. We used water balance, statistical correlation, and distributed deterministic modeling approaches to analyze the hydrological sensitivity of the basin to possible land-use and climatic changes. The results indicated a stronger influence of basin characteristics compared to climatic characteristics on flow

  5. An analysis of the daily precipitation variability in the Himalayan orogen using a statistical parameterisation and its potential in driving landscape evolution models with stochastic climatic forcing (United States)

    Deal, Eric; Braun, Jean


    A current challenge in landscape evolution modelling is to integrate realistic precipitation patterns and behaviour into longterm fluvial erosion models. The effect of precipitation on fluvial erosion can be subtle as well as nonlinear, implying that changes in climate (e.g. precipitation magnitude or storminess) may have unexpected outcomes in terms of erosion rates. For example Tucker and Bras (2000) show theoretically that changes in the variability of precipitation (storminess) alone can influence erosion rate across a landscape. To complicate the situation further, topography, ultimately driven by tectonic uplift but shaped by erosion, has a major influence on the distribution and style of precipitation. Therefore, in order to untangle the coupling between climate, erosion and tectonics in an actively uplifting orogen where fluvial erosion is dominant it is important to understand how the 'rain dial' used in a landscape evolution model (LEM) corresponds to real precipitation patterns. One issue with the parameterisation of rainfall for use in an LEM is the difference between the timescales for precipitation (≤ 1 year) and landscape evolution (> 103 years). As a result, precipitation patterns must be upscaled before being integrated into a model. The relevant question then becomes: What is the most appropriate measure of precipitation on a millennial timescale? Previous work (Tucker and Bras, 2000; Lague, 2005) has shown that precipitation can be properly upscaled by taking into account its variable nature, along with its average magnitude. This captures the relative size and frequency of extreme events, ensuring a more accurate characterisation of the integrated effects of precipitation on erosion over long periods of time. In light of this work, we present a statistical parameterisation that accurately models the mean and daily variability of ground based (APHRODITE) and remotely sensed (TRMM) precipitation data in the Himalayan orogen with only a few

  6. Linking bedrock exhumation, fluvial terraces, and geomorphic indices to constrain deformation rates at multiple timescales across the Himalayan deformation front in the Kashmir Himalaya, northwest India. (United States)

    Gavillot, Y. G.


    In Kashmir, the Himalayan Frontal thrust (HFT) is blind, characterized by a broad fold, the Suruin-Mastargh anticline, and displays no major emergent faults cutting either limb. A lack of knowledge of the rate of shortening and structural framework of the Suruin-Mastargh anticline hampers quantifying the earthquake potential for the deformation front. Our study combines bedrock exhumation, folded fluvial terraces, long-river profiles and river incision (specific stream power) analyses across the deformation front. At the core of the frontal fold, Apatite (U-Th)/He (AHe) cooling ages of detrital grains from the Siwalik foreland sediments indicate significant resetting. AHe data and thermal modeling reveal rapid cooling and exhumation initiated ca. 4 Ma for the deformation front, at least 3 Ma earlier than is indicated from previously available data. Exhumation rates over the last 1 m.y. and 4 m.y. range from 0.5 - 2.4 mm/yr, and 0.5 - 1 mm/yr, respectively. Four fluvial terraces yield multiple OSL and depth profiles Be10 TCN ages between 53 ka and 0.4 ka. Vector fold restoration of long terrace profiles, calculated specific stream power values, bedrock dip data, and stratigraphic thickness indicate a deformation pattern controlled by a duplex structure emplaced at depth along the basal décollement, folding the overlying roof thrust and foreland strata into a detachment-like fold. Dated terraces across the frontal fold yield rock uplift and shortening rates that range between 1.8-2.5 mm/yr, and 3.8-5.4 mm/yr, respectively, since 53 ka. Similarly, a balanced cross section yields a long-term shortening rate of 5mm mm/yr since 4 Ma. Geodetic data indicate that an 11-12 mm/yr arc-normal shortening rate characterizes the interseismic strain accumulation across the plate boundary due to India-Tibet convergence. These data combined with rates of other active internal faults in the Kashmir Himalaya indicate that shortening occurs roughly at an equal rate between folding at

  7. Improving greater trochanteric reattachment with a novel cable plate system. (United States)

    Baril, Yannick; Bourgeois, Yan; Brailovski, Vladimir; Duke, Kajsa; Laflamme, G Yves; Petit, Yvan


    Cable-grip systems are commonly used for greater trochanteric reattachment because they have provided the best fixation performance to date, even though they have a rather high complication rate. A novel reattachment system is proposed with the aim of improving fixation stability. It consists of a Y-shaped fixation plate combined with locking screws and superelastic cables to reduce cable loosening and limit greater trochanter movement. The novel system is compared with a commercially available reattachment system in terms of greater trochanter movement and cable tensions under different greater trochanteric abductor application angles. A factorial design of experiments was used including four independent variables: plate system, cable type, abductor application angle, and femur model. The test procedure included 50 cycles of simultaneous application of an abductor force on the greater trochanter and a hip force on the femoral head. The novel plate reduces the movements of a greater trochanter fragment within a single loading cycle up to 26%. Permanent degradation of the fixation (accumulated movement based on 50-cycle testing) is reduced up to 46%. The use of superelastic cables reduces tension loosening up to 24%. However this last improvement did not result in a significant reduction of the grater trochanter movement. The novel plate and cables present advantages over the commercially available greater trochanter reattachment system. The plate reduces movements generated by the hip abductor. The superelastic cables reduce cable loosening during cycling. Both of these positive effects could decrease the risks related to grater trochanter non-union. Copyright © 2012 IPEM. Published by Elsevier Ltd. All rights reserved.

  8. Immigration history of amphidromous species on a Greater Antillean island (United States)

    Benjamin D. Cook; Catherine M. Pringle; Jane M. Hughes


    Aim To use molecular data to test for dispersal structuring in the immigration history of an amphidromous community on an island. Location The Caribbean island of Puerto Rico. Methods Mitochondrial DNA sequences were obtained from 11 amphidromous species, including shrimps, fish and a gastropod, sampled from throughout the island. The timing of population expansion (TE...

  9. Vaccine Preventability of Meningococcal Clone, Greater Aachen Region, Germany

    NARCIS (Netherlands)

    Elias, Johannes; Schouls, Leo M.; van de Pol, Ingrid; Keijzers, Wendy C.; Martin, Diana R.; Glennie, Anne; Oster, Philipp; Frosch, Matthias; Vogel, Ulrich; van der Ende, Arie


    Emergence of serogroup B meningococci of clonal complex sequence type (ST) 41/44 can cause high levels of disease, as exemplified by a recent epidemic in New Zealand. Multiplication of annual incidence rates (3.1 cases/100,000 population) of meningococcal disease in a defined German region, the city

  10. Nucleotide sequence composition and method for detection of neisseria gonorrhoeae

    International Nuclear Information System (INIS)

    Lo, A.; Yang, H.L.


    This patent describes a composition of matter that is specific for Neisseria gonorrhoeae. It comprises: at least one nucleotide sequence for which the ratio of the amount of the sequence which hybridizes to chromosomal DNA of Neisseria gonorrhoeae to the amount of the sequence which hybridizes to chromosomal DNA of Neisseria meningitidis is greater than about five. The ratio being obtained by a method described

  11. Nucleotide sequence composition and method for detection of neisseria gonorrhoeae

    Energy Technology Data Exchange (ETDEWEB)

    Lo, A.; Yang, H.L.


    This patent describes a composition of matter that is specific for {ital Neisseria gonorrhoeae}. It comprises: at least one nucleotide sequence for which the ratio of the amount of the sequence which hybridizes to chromosomal DNA of {ital Neisseria gonorrhoeae} to the amount of the sequence which hybridizes to chromosomal DNA of {ital Neisseria meningitidis} is greater than about five. The ratio being obtained by a method described.

  12. Technical concept for a Greater Confinement Disposal test facility

    International Nuclear Information System (INIS)

    Hunter, P.H.


    For the past two years, Ford, Bacon and Davis has been performing technical services for the Department of Energy at the Nevada Test Site in specific development of defense low-level waste management concepts for greater confinement disposal concept with particular application to arid sites. The investigations have included the development of Criteria for Greater Confinement Disposal, NVO-234, which was published in May of 1981 and the draft of the technical concept for Greater Confinement Disposal, with the latest draft published in November 1981. The final draft of the technical concept and design specifications are expected to be published imminently. The document is prerequisite to the actual construction and implementation of the demonstration facility this fiscal year. The GCD Criteria Document, NVO-234 is considered to contain information complimentary and compatible with that being developed for the reserved section 10 CFR 61.51b of the NRCs proposed licensing rule for low level waste disposal facilities

  13. Divide and conquer: enriching environmental sequencing data.

    Directory of Open Access Journals (Sweden)

    Anne Bergeron


    Full Text Available In environmental sequencing projects, a mix of DNA from a whole microbial community is fragmented and sequenced, with one of the possible goals being to reconstruct partial or complete genomes of members of the community. In communities with high diversity of species, a significant proportion of the sequences do not overlap any other fragment in the sample. This problem will arise not only in situations with a relatively even distribution of many species, but also when the community in a particular environment is routinely dominated by the same few species. In the former case, no genomes may be assembled at all, while in the latter case a few dominant species in an environment will always be sequenced at high coverage to the detriment of coverage of the greater number of sparse species.Here we show that, with the same global sequencing effort, separating the species into two or more sub-communities prior to sequencing can yield a much higher proportion of sequences that can be assembled. We first use the Lander-Waterman model to show that, if the expected percentage of singleton sequences is higher than 25%, then, under the uniform distribution hypothesis, splitting the community is always a wise choice. We then construct simulated microbial communities to show that the results hold for highly non-uniform distributions. We also show that, for the distributions considered in the experiments, it is possible to estimate quite accurately the relative diversity of the two sub-communities.Given the fact that several methods exist to split microbial communities based on physical properties such as size, density, surface biochemistry, or optical properties, we strongly suggest that groups involved in environmental sequencing, and expecting high diversity, consider splitting their communities in order to maximize the information content of their sequencing effort.

  14. Detection of M-Sequences from Spike Sequence in Neuronal Networks

    Directory of Open Access Journals (Sweden)

    Yoshi Nishitani


    Full Text Available In circuit theory, it is well known that a linear feedback shift register (LFSR circuit generates pseudorandom bit sequences (PRBS, including an M-sequence with the maximum period of length. In this study, we tried to detect M-sequences known as a pseudorandom sequence generated by the LFSR circuit from time series patterns of stimulated action potentials. Stimulated action potentials were recorded from dissociated cultures of hippocampal neurons grown on a multielectrode array. We could find several M-sequences from a 3-stage LFSR circuit (M3. These results show the possibility of assembling LFSR circuits or its equivalent ones in a neuronal network. However, since the M3 pattern was composed of only four spike intervals, the possibility of an accidental detection was not zero. Then, we detected M-sequences from random spike sequences which were not generated from an LFSR circuit and compare the result with the number of M-sequences from the originally observed raster data. As a result, a significant difference was confirmed: a greater number of “0–1” reversed the 3-stage M-sequences occurred than would have accidentally be detected. This result suggests that some LFSR equivalent circuits are assembled in neuronal networks.

  15. Study of the Genetic Diversity of the Ornamental Fish Badis badis (Hamilton-Buchanan, 1822 in the Terai Region of Sub-Himalayan West Bengal, India

    Directory of Open Access Journals (Sweden)

    Tanmay Mukhopadhyay


    Full Text Available Dwarf chameleon fish or Badis badis, a lesser known ornamental freshwater fish, has recently been included in the Indian threatened category of fish list. There are insufficient studies with regard to the assessment of genetic background of this ichthyofauna, especially in the western sub-Himalayan region of West Bengal, India, popularly known as the Terai. The present study is the first attempt to investigate the present status of the genetic background of this species in the Mahananda and Balason rivers, major streams of this region. Twenty-one selective RAPD primers generated 53 and 60 polymorphic fragments in the Mahananda and Balason populations, respectively. The proportion of polymorphic loci, Nei’s genetic diversity (H, and Shannon’s index (H′ were 0.4416, 0.1654±0.2023, and 0.2450±0.2907, respectively, in Mahananda river population and were 0.5041, 0.1983±0.2126, and 0.2901±0.3037, respectively, in Balason river population. Inbreeding coefficient and degree of gene differentiation were also calculated. The H and H′ were found to be 0.1601±0.1944 and 0.2363±0.2782, respectively, in overall Mahananda-Balason river system. Our study revealed considerable lack of genetic variation among the individuals of Badis badis. The genetic data obtained from the present study lend support to the view that there is a scope of stock improvement for this ichthyofauna.

  16. Pharmacognostic Studies on Two Himalayan Species of Traditional Medicinal Value: Allium wallichii and Allium stracheyi

    Directory of Open Access Journals (Sweden)

    Umeshkumar TIWARI


    Full Text Available The present research was aimed as a pharmacognostic study of whole plants of Allium wallichii and Allium stracheyi, both of which are very important traditional medicinal plants of North-West Himalayas. This study was carried out in terms of macroscopic and microscopic analyses and standard histochemical methods were followed for detecting starch, calcium oxalate, tannins, total lipids and alkaloids. Allium wallichi can be distinguished from A. stracheyi by possessing polyarch roots, mycorrhizal fungi in the outer cortical cells and triangular leaf midrib. The present study is the first to describe the pharmacognosy in terms of anatomical and histochemical features of these two Himalayan Allium species. Although they are listed in Ayurvedic database, the API so far has not given an account on these two species and hence this work is of high importance. Also, the herbal industries, researchers and traditional medicine can now use the distinguishing characters of these species listed in the current paper, while specifically acquiring them from local markets without any confusion.

  17. Reduced hypoxic ventilatory response with preserved blood oxygenation in yoga trainees and Himalayan Buddhist monks at altitude: evidence of a different adaptive strategy? (United States)

    Bernardi, Luciano; Passino, Claudio; Spadacini, Giammario; Bonfichi, Maurizio; Arcaini, Luca; Malcovati, Luca; Bandinelli, Gabriele; Schneider, Annette; Keyl, Cornelius; Feil, Paul; Greene, Richard E; Bernasconi, Carlo


    Yoga induces long-term changes in respiratory function and control. We tested whether it represents a successful strategy for high-altitude adaptation. We compared ventilatory, cardiovascular and hematological parameters in: 12 Caucasian yoga trainees and 12 control sea-level residents, at baseline and after 2-week exposure to high altitude (Pyramid Laboratory, Nepal, 5,050 m), 38 active lifestyle high-altitude natives (Sherpas) and 13 contemplative lifestyle high-altitude natives with practice of yoga-like respiratory exercises (Buddhist monks) studied at 5,050 m. At baseline, hypoxic ventilatory response (HVR), red blood cell count and hematocrit were lower in Caucasian yoga trainees than in controls. After 14 days at altitude, yoga trainees showed similar oxygen saturation, blood pressure, RR interval compared to controls, but lower HVR (-0.44 +/- 0.08 vs. -0.98 +/- 0.21 l/min/m/%SaO(2), P monks was lower than in Sherpas (-0.23 +/- 0.05 vs. -0.63 +/- 0.09 l/min/m/%SaO(2), P monks as compared to Sherpas. In conclusion, Caucasian subjects practicing yoga maintain a satisfactory oxygen transport at high altitude, with minimal increase in ventilation and with reduced hematological changes, resembling Himalayan natives. Respiratory adaptations induced by the practice of yoga may represent an efficient strategy to cope with altitude-induced hypoxia.

  18. Climate change impact and vulnerability assessment of forests in the Indian Western Himalayan region: A case study of Himachal Pradesh, India

    Directory of Open Access Journals (Sweden)

    Sujata Upgupta


    Full Text Available Climate change impact and vulnerability assessment at state and regional levels is necessary to develop adaptation strategies for forests in the biogeographically vital Himalayan region. The present study assesses forest ecosystem vulnerability to climate change across Himachal Pradesh and presents the priority districts for vulnerability reduction under ‘current climate’ and ‘future climate’ scenarios. Vulnerability of forests under ‘current climate’ scenario is assessed by adopting indicator-based approach, while the vulnerability under ‘future climate’ scenario is assessed using climate and vegetation impact models. Based on the vulnerability index estimated to present the vulnerability of forests under current and projected climate change impacts representing climate driven vulnerability, five districts – Chamba, Kangra, Kullu, Mandi and Shimla are identified as priority forest districts for adaptation planning. Identifying vulnerable forest districts and forests will help policy makers and forest managers to prioritize resource allocation and forest management interventions, to restore health and productivity of forests and to build long-term resilience to climate change.

  19. Structure and evolution of the drainage system of a Himalayan debris-covered glacier, and its relationship with patterns of mass loss (United States)

    Benn, Douglas I.; Thompson, Sarah; Gulley, Jason; Mertes, Jordan; Luckman, Adrian; Nicholson, Lindsey


    We provide the first synoptic view of the drainage system of a Himalayan debris-covered glacier and its evolution through time, based on speleological exploration and satellite image analysis of Ngozumpa Glacier, Nepal. The drainage system has several linked components: (1) a seasonal subglacial drainage system below the upper ablation zone; (2) supraglacial channels, allowing efficient meltwater transport across parts of the upper ablation zone; (3) sub-marginal channels, allowing long-distance transport of meltwater; (4) perched ponds, which intermittently store meltwater prior to evacuation via the englacial drainage system; (5) englacial cut-and-closure conduits, which may undergo repeated cycles of abandonment and reactivation; and (6) a "base-level" lake system (Spillway Lake) dammed behind the terminal moraine. The distribution and relative importance of these elements has evolved through time, in response to sustained negative mass balance. The area occupied by perched ponds has expanded upglacier at the expense of supraglacial channels, and Spillway Lake has grown as more of the glacier surface ablates to base level. Subsurface processes play a governing role in creating, maintaining, and shutting down exposures of ice at the glacier surface, with a major impact on spatial patterns and rates of surface mass loss. Comparison of our results with observations on other glaciers indicate that englacial drainage systems play a key role in the response of debris-covered glaciers to sustained periods of negative mass balance.

  20. Geomorphic effectiveness of a long profile shape and the role of inherent geological controls in the Himalayan hinterland area of the Ganga River basin, India (United States)

    Sonam; Jain, Vikrant


    Long profiles of rivers provide a platform to analyse interaction between geological and geomorphic processes operating at different time scales. Identification of an appropriate model for river long profile becomes important in order to establish a quantitative relationship between the profile shape, its geomorphic effectiveness, and inherent geological characteristics. This work highlights the variability in the long profile shape of the Ganga River and its major tributaries, its impact on stream power distribution pattern, and role of the geological controls on it. Long profile shapes are represented by the sum of two exponential functions through the curve fitting method. We have shown that coefficients of river long profile equations are governed by the geological characteristics of subbasins. These equations further define the spatial distribution pattern of stream power and help to understand stream power variability in different geological terrains. Spatial distribution of stream power in different geological terrains successfully explains spatial variability in geomorphic processes within the Himalayan hinterland area. In general, the stream power peaks of larger rivers lie in the Higher Himalaya, and rivers in the eastern hinterland area are characterised by the highest magnitude of stream power.

  1. Foliar and soil nutrient distribution in conifer forests of moist temperate areas of himalayan and hindukush region of pakistan: a multivariate approach

    International Nuclear Information System (INIS)

    Ahmad, K.; Khan, Z.I.; Ashfaq, A.


    Foliar nutrient concentration for the dominant conifer species (Pinus wallichiana, Abies pindrow and Cedrus deodara) of moist temperate areas of Himalayan and Hindukush region of Pakistan was evaluated. Soils samples and conifer needles were collected from forests at 41 sites in the study area. Six macro and seven micronutrients were analyzed for both soils and tissue. The mean nutrient levels and variability for each species was evaluated. The gradients in tissue nutrients were exposed by means of correspondence analysis (CA) and canonical correspondence (CCA), for each species. The first CA axis of Pinus wallichiana data was significantly correlated with soil N, P and K (p<0.05). The second CA axis was correlated with P, B and Ca, while the third was correlated with K and Mg (p<0.05). The first CA axis of Abies pindrow was not correlated with any soil nutrients, but the second axis showed correlation with soil Ca (p<0.05) and the third with S, Fe and N (p at the most 0.05). Cedrus deodara CA axes were not markedly correlated with soil nutrients. Canonical correspondence analysis (CCA) exposed the correlation structure between tissue nutrient and soil nutrient matrices with similar results thereby supporting the results of CA. (author)

  2. Expatriate job performance in Greater China: Does age matter?

    DEFF Research Database (Denmark)

    Selmer, Jan; Lauring, Jakob; Feng, Yunxia

    to expatriates in Chinese societies. It is possible that older business expatriates will receive more respect and be treated with more deference in a Chinese cultural context than their apparently younger colleagues. This may have a positive impact on expatriates’ job performance. To empirically test...... this presumption, business expatriates in Greater Chine were targeted by a survey. Controlling for the potential bias of a number of background variables, results indicate that contextual/managerial performance, including general managerial functions applied to the subsidiary in Greater China, had a positive...

  3. Absenteeism movement in Greater Poland in 1840–1902


    Izabela Krasińska


    The article presents the origins and development of the idea of absenteeism in Greater Poland in the 19th century. The start date for the research is 1840, which is considered to be a breakthrough year in the history of an organized absenteeism movement in Greater Poland. It was due to the Association for the Suppression of the Use of Vodka (Towarzystwo ku Przytłumieniu Używania Wódki) in the Great Duchy of Posen that was then established in Kórnik. It was a secular organization that came int...

  4. Sequences for Student Investigation (United States)

    Barton, Jeffrey; Feil, David; Lartigue, David; Mullins, Bernadette


    We describe two classes of sequences that give rise to accessible problems for undergraduate research. These problems may be understood with virtually no prerequisites and are well suited for computer-aided investigation. The first sequence is a variation of one introduced by Stephen Wolfram in connection with his study of cellular automata. The…

  5. Adjustment of Business Expatriates in Greater China: A Strategic Perspective

    DEFF Research Database (Denmark)

    Selmer, Jan


    Research has found that due to similarities, firms which have gained business experience elsewhere in Greater China may exhibit relatively better performance in mainland China. Hence, the experience of business expatriates could be of strategic importance for the expansion path of their firms...

  6. College Students with ADHD at Greater Risk for Sleep Disorders (United States)

    Gaultney, Jane F.


    The pediatric literature indicates that children with ADHD are at greater risk for sleep problems, daytime sleepiness, and some sleep disorders than children with no diagnosed disability. It has not been determined whether this pattern holds true among emerging adults, and whether comorbid sleep disorders with ADHD predict GPA. The present study…

  7. Ecology of greater sage-grouse in the Dakotas (United States)

    Christopher C. Swanson


    Greater sage-grouse (Centrocercus urophasianus) populations and the sagebrush (Artemisia spp.) communities that they rely on have dramatically declined from historic levels. Moreover, information regarding sage-grouse annual life-history requirements at the eastern-most extension of sagebrush steppe communities is lacking....

  8. The Easterlin Illusion: Economic growth does go with greater happiness

    NARCIS (Netherlands)

    R. Veenhoven (Ruut); F. Vergunst (Floris)


    markdownabstract__Abstract__ The 'Easterlin Paradox' holds that economic growth in nations does not buy greater happiness for the average citizen. This thesis was advanced in the 1970s on the basis of the then available data on happiness in nations. Later data have disproved most of the empirical

  9. Job-Sharing at the Greater Victoria Public Library. (United States)

    Miller, Don


    Describes the problems associated with the management of part-time library employees and some solutions afforded by a job sharing arrangement in use at the Greater Victoria Public Library. This is a voluntary work arrangement, changing formerly full-time positions into multiple part-time positions. (JVP)

  10. Radiographic features of tuberculous osteitis in greater trochanter and lschium

    International Nuclear Information System (INIS)

    Hahm, So Hee; Lee, Ye Ri; Kim, Dong Jin; Sung, Ki Jun; Lim, Jong Nam


    To evaluate, if possible, the radiographic features of tuberculous osteitis in the greater trochanter and ischium, and to determine the cause of the lesions. We reterospectively reviewed the plain radiographic findings of 14 ptients with histologically proven tuberculous osteitis involving the greater trochanter and ischium. In each case, the following were analyzed:morphology of bone destruction, including cortical erosion;periosteal reaction;presence or abscence of calcific shadows in adjacent soft tissue. On the basis of an analysis of radiographic features and correlation of the anatomy with adjacent structures we attempted to determine causes. Of the 14 cases evaluated, 12 showed varrious degrees of extrinsic erosion on the outer cortical bone of the greater trochanter and ischium ; in two cases, bone destruction was so severe that the radiographic features of advanced perforated osteomyelitis were simulated. In addition to findings of bone destruction, in these twelve cases, the presence of sequestrum or calcific shadows was seen in adjacent soft tissue. Tuberculous osteitis in the greater trochanter and ischium showed the characteristic findings of chronic extrinsic erosion. On the basis of these findings we can suggest that these lesions result from an extrinsic pathophysiologic cause such as adjacent bursitis

  11. Radiographic features of tuberculous osteitis in greater trochanter and lschium

    Energy Technology Data Exchange (ETDEWEB)

    Hahm, So Hee; Lee, Ye Ri [Hanil Hospital Affiliated to KEPCO, Seoul (Korea, Republic of); Kim, Dong Jin; Sung, Ki Jun [Yonsei Univ. Wonju College of Medicine, Wonju (Korea, Republic of); Lim, Jong Nam [Konkuk Univ. College of Medicine, Seoul (Korea, Republic of)


    To evaluate, if possible, the radiographic features of tuberculous osteitis in the greater trochanter and ischium, and to determine the cause of the lesions. We reterospectively reviewed the plain radiographic findings of 14 ptients with histologically proven tuberculous osteitis involving the greater trochanter and ischium. In each case, the following were analyzed:morphology of bone destruction, including cortical erosion;periosteal reaction;presence or abscence of calcific shadows in adjacent soft tissue. On the basis of an analysis of radiographic features and correlation of the anatomy with adjacent structures we attempted to determine causes. Of the 14 cases evaluated, 12 showed varrious degrees of extrinsic erosion on the outer cortical bone of the greater trochanter and ischium ; in two cases, bone destruction was so severe that the radiographic features of advanced perforated osteomyelitis were simulated. In addition to findings of bone destruction, in these twelve cases, the presence of sequestrum or calcific shadows was seen in adjacent soft tissue. Tuberculous osteitis in the greater trochanter and ischium showed the characteristic findings of chronic extrinsic erosion. On the basis of these findings we can suggest that these lesions result from an extrinsic pathophysiologic cause such as adjacent bursitis.

  12. Greater Confinement Disposal trench and borehole operations status

    International Nuclear Information System (INIS)

    Harley, J.P. Jr.; Wilhite, E.L.; Jaegge, W.J.


    Greater Confinement Disposal (GCD) facilities have been constructed within the operating burial ground at the Savannah River Plant (SRP) to dispose of the higher activity fraction of SRP low-level waste. GCD practices of waste segregation, packaging, emplacement below the root zone, and waste stabilization are being used in the demonstration. 2 refs., 2 figs., 2 tabs

  13. The Mesozoic-Cenozoic tectonic evolution of the Greater Caucasus

    NARCIS (Netherlands)

    Saintot, A.N.; Brunet, M.F.; Yakovlev, F.; Sébrier, M.; Stephenson, R.A.; Ershov, A.V.; Chalot-Prat, F.; McCann, T.


    The Greater Caucasus (GC) fold-and-thrust belt lies on the southern deformed edge of the Scythian Platform (SP) and results from the Cenoozoic structural inversion of a deep marine Mesozoic basin in response to the northward displacement of the Transcaucasus (lying south of the GC subsequent to the

  14. Introduction. China and the Challenges in Greater Middle East

    DEFF Research Database (Denmark)

    Sørensen, Camilla T. N.; Andersen, Lars Erslev; Jiang, Yang


    This collection of short papers is an outcome of an international conference entitled China and the Challenges in Greater Middle East, organized by the Danish Institute for International Studies and Copenhagen University on 10 November 2015. The conference sought answers to the following questions...

  15. On the Occurrence of Standardized Regression Coefficients Greater than One. (United States)

    Deegan, John, Jr.


    It is demonstrated here that standardized regression coefficients greater than one can legitimately occur. Furthermore, the relationship between the occurrence of such coefficients and the extent of multicollinearity present among the set of predictor variables in an equation is examined. Comments on the interpretation of these coefficients are…

  16. The Educational Afterlife of Greater Britain, 1903-1914 (United States)

    Gardner, Philip


    Following its late nineteenth-century emergence as an important element within federalist thinking across the British Empire, the idea of Greater Britain lost much of its political force in the years following the Boer War. The concept however continued to retain considerable residual currency in other fields of Imperial debate, including those…

  17. Sequence History Update Tool (United States)

    Khanampompan, Teerapat; Gladden, Roy; Fisher, Forest; DelGuercio, Chris


    The Sequence History Update Tool performs Web-based sequence statistics archiving for Mars Reconnaissance Orbiter (MRO). Using a single UNIX command, the software takes advantage of sequencing conventions to automatically extract the needed statistics from multiple files. This information is then used to populate a PHP database, which is then seamlessly formatted into a dynamic Web page. This tool replaces a previous tedious and error-prone process of manually editing HTML code to construct a Web-based table. Because the tool manages all of the statistics gathering and file delivery to and from multiple data sources spread across multiple servers, there is also a considerable time and effort savings. With the use of The Sequence History Update Tool what previously took minutes is now done in less than 30 seconds, and now provides a more accurate archival record of the sequence commanding for MRO.

  18. HIV Sequence Compendium 2015

    Energy Technology Data Exchange (ETDEWEB)

    Foley, Brian Thomas [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Leitner, Thomas Kenneth [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Apetrei, Cristian [Univ. of Pittsburgh, PA (United States); Hahn, Beatrice [Univ. of Pennsylvania, Philadelphia, PA (United States); Mizrachi, Ilene [National Center for Biotechnology Information, Bethesda, MD (United States); Mullins, James [Univ. of Washington, Seattle, WA (United States); Rambaut, Andrew [Univ. of Edinburgh, Scotland (United Kingdom); Wolinsky, Steven [Northwestern Univ., Evanston, IL (United States); Korber, Bette Tina Marie [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    This compendium is an annual printed summary of the data contained in the HIV sequence database. We try to present a judicious selection of the data in such a way that it is of maximum utility to HIV researchers. Each of the alignments attempts to display the genetic variability within the different species, groups and subtypes of the virus. This compendium contains sequences published before January 1, 2015. Hence, though it is published in 2015 and called the 2015 Compendium, its contents correspond to the 2014 curated alignments on our website. The number of sequences in the HIV database is still increasing. In total, at the end of 2014, there were 624,121 sequences in the HIV Sequence Database, an increase of 7% since the previous year. This is the first year that the number of new sequences added to the database has decreased compared to the previous year. The number of near complete genomes (>7000 nucleotides) increased to 5834 by end of 2014. However, as in previous years, the compendium alignments contain only a fraction of these. A more complete version of all alignments is available on our website, content/sequence/NEWALIGN/align.html As always, we are open to complaints and suggestions for improvement. Inquiries and comments regarding the compendium should be addressed to

  19. Mapping sequences by parts

    Directory of Open Access Journals (Sweden)

    Guziolowski Carito


    Full Text Available Abstract Background: We present the N-map method, a pairwise and asymmetrical approach which allows us to compare sequences by taking into account evolutionary events that produce shuffled, reversed or repeated elements. Basically, the optimal N-map of a sequence s over a sequence t is the best way of partitioning the first sequence into N parts and placing them, possibly complementary reversed, over the second sequence in order to maximize the sum of their gapless alignment scores. Results: We introduce an algorithm computing an optimal N-map with time complexity O (|s| × |t| × N using O (|s| × |t| × N memory space. Among all the numbers of parts taken in a reasonable range, we select the value N for which the optimal N-map has the most significant score. To evaluate this significance, we study the empirical distributions of the scores of optimal N-maps and show that they can be approximated by normal distributions with a reasonable accuracy. We test the functionality of the approach over random sequences on which we apply artificial evolutionary events. Practical Application: The method is illustrated with four case studies of pairs of sequences involving non-standard evolutionary events.

  20. An ongoing earthquake sequence near Dhaka, Bangladesh, from regional recordings (United States)

    Howe, M.; Mondal, D. R.; Akhter, S. H.; Kim, W.; Seeber, L.; Steckler, M. S.


    Earthquakes in and around the syntaxial region between the continent-continent collision of the Himalayan arc and oceanic subduction of the Sunda arc result primarily from the convergence of India and Eurasia-Sunda plates along two fronts. The northern front, the convergence of the Indian and Eurasian plates, has produced the Himalayas. The eastern front, the convergence of the Indian and Sunda plates, ranges from ocean-continent subduction at the Andaman Arc and Burma Arc, and transitions to continent-continent collision to the north at the Assam Syntaxis in northeast India. The India-Sunda convergence at the Burma Arc is extremely oblique. The boundary-normal convergence rate is ~17 mm/yr while the boundary-parallel rate is ~45 mm/yr including the well-known Sagaing strike-slip fault, which accommodates about half the shear component. This heterogeneous tectonic setting produces multiple earthquake sources that need to be considered when assessing seismic hazard and risk in this region. The largest earthquakes, just as in other subduction systems, are expected to be interplate events that occur on the low-angle megathrusts, such as the Mw 9.2 2004 Sumatra-Andaman earthquake and the 1762 earthquake along the Arakan margin. These earthquakes are known to produce large damage over vast areas, but since they account for large fault motions they are relatively rare. The majority of current seismicity in the study area is intraplate. Most of the seismicity associated with the Burma Arc subduction system is in the down-going slab, including the shallow-dipping part below the megathrust flooring the accretionary wedge. The strike of the wedge is ~N-S and Dhaka lies at its outer limit. One particular source relevant to seismic risk in Dhaka is illuminated by a multi-year sequence of earthquakes in Bangladesh less than 100 km southeast of Dhaka. The population in Dhaka (now at least 15 million) has been increasing dramatically due to rapid urbanization. The vulnerability

  1. Higher motivation - greater control? The effect of arousal on judgement. (United States)

    Riemer, Hila; Viswanathan, Madhu


    This research examines control over the effect of arousal, a dimension of affect, on judgement. Past research shows that high processing motivation enhances control over the effects of affect on judgement. Isolating and studying arousal as opposed to valence, the other dimension of affect, and its effect on judgement, we identify boundary conditions for past findings. Drawing from the literature on processes by which arousal influences judgement, we demonstrate that the role of motivation is contingent upon the type of judgement task (i.e., memory- versus stimulus-based judgement). In stimulus-based judgement, individuals exert greater control over the effect of arousal on judgement under low compared to high motivation. In contrast, in memory-based judgement individuals exert greater control over the effect of arousal under high compared to low motivation. Theoretical implications and avenues for future research are discussed.

  2. Patient expectations predict greater pain relief with joint arthroplasty. (United States)

    Gandhi, Rajiv; Davey, John Roderick; Mahomed, Nizar


    We examined the relationship between patient expectations of total joint arthroplasty and functional outcomes. We surveyed 1799 patients undergoing primary hip or knee arthroplasty for demographic data and Western Ontario McMaster University Osteoarthritis Index scores at baseline, 3 months, and 1 year of follow-up. Patient expectations were determined with 3 survey questions. The patients with the greatest expectations of surgery were younger, male, and had a lower body mass index. Linear regression modeling showed that a greater expectation of pain relief with surgery independently predicted greater reported pain relief at 1 year of follow-up, adjusted for all relevant covariates (P relief after joint arthroplasty is an important predictor of outcomes at 1 year.

  3. The Colliding Beams Sequencer

    International Nuclear Information System (INIS)

    Johnson, D.E.; Johnson, R.P.


    The Colliding Beam Sequencer (CBS) is a computer program used to operate the pbar-p Collider by synchronizing the applications programs and simulating the activities of the accelerator operators during filling and storage. The Sequencer acts as a meta-program, running otherwise stand alone applications programs, to do the set-up, beam transfers, acceleration, low beta turn on, and diagnostics for the transfers and storage. The Sequencer and its operational performance will be described along with its special features which include a periodic scheduler and command logger. 14 refs., 3 figs

  4. Phylogenetic Trees From Sequences (United States)

    Ryvkin, Paul; Wang, Li-San

    In this chapter, we review important concepts and approaches for phylogeny reconstruction from sequence data.We first cover some basic definitions and properties of phylogenetics, and briefly explain how scientists model sequence evolution and measure sequence divergence. We then discuss three major approaches for phylogenetic reconstruction: distance-based phylogenetic reconstruction, maximum parsimony, and maximum likelihood. In the third part of the chapter, we review how multiple phylogenies are compared by consensus methods and how to assess confidence using bootstrapping. At the end of the chapter are two sections that list popular software packages and additional reading.

  5. Torsion of the greater omentum: A rare preoperative diagnosis

    International Nuclear Information System (INIS)

    Tandon, Ankit Anil; Lim, Kian Soon


    Torsion of the greater omentum is a rare acute abdominal condition that is seldom diagnosed preoperatively. We report the characteristic computed tomography (CT) scan findings and the clinical implications of this unusual diagnosis in a 41-year-old man, who also had longstanding right inguinal hernia. Awareness of omental torsion as a differential diagnosis in the acute abdomen setting is necessary for correct patient management

  6. Ecological specialization and morphological diversification in Greater Antillean boas. (United States)

    Reynolds, R Graham; Collar, David C; Pasachnik, Stesha A; Niemiller, Matthew L; Puente-Rolón, Alberto R; Revell, Liam J


    Colonization of islands can dramatically influence the evolutionary trajectories of organisms, with both deterministic and stochastic processes driving adaptation and diversification. Some island colonists evolve extremely large or small body sizes, presumably in response to unique ecological circumstances present on islands. One example of this phenomenon, the Greater Antillean boas, includes both small (<90 cm) and large (4 m) species occurring on the Greater Antilles and Bahamas, with some islands supporting pairs or trios of body-size divergent species. These boas have been shown to comprise a monophyletic radiation arising from a Miocene dispersal event to the Greater Antilles, though it is not known whether co-occurrence of small and large species is a result of dispersal or in situ evolution. Here, we provide the first comprehensive species phylogeny for this clade combined with morphometric and ecological data to show that small body size evolved repeatedly on separate islands in association with specialization in substrate use. Our results further suggest that microhabitat specialization is linked to increased rates of head shape diversification among specialists. Our findings show that ecological specialization following island colonization promotes morphological diversity through deterministic body size evolution and cranial morphological diversification that is contingent on island- and species-specific factors. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

  7. Moderate Baseline Vagal Tone Predicts Greater Prosociality in Children (United States)

    Miller, Jonas G.; Kahle, Sarah; Hastings, Paul D.


    Vagal tone is widely believed to be an important physiological aspect of emotion regulation and associated positive behaviors. However, there is inconsistent evidence for relations between children’s baseline vagal tone and their helpful or prosocial responses to others (Hastings & Miller, 2014). Recent work in adults suggests a quadratic association (inverted U-shape curve) between baseline vagal tone and prosociality (Kogan et al., 2014). The present research examined whether this nonlinear association was evident in children. We found consistent evidence for a quadratic relation between vagal tone and prosociality across 3 samples of children using 6 different measures. Compared to low and high vagal tone, moderate vagal tone in early childhood concurrently predicted greater self-reported prosociality (Study 1), observed empathic concern in response to the distress of others and greater generosity toward less fortunate peers (Study 2), and longitudinally predicted greater self-, mother-, and teacher-reported prosociality 5.5 years later in middle childhood (Study 3). Taken together, our findings suggest that moderate vagal tone at rest represents a physiological preparedness or tendency to engage in different forms of prosociality across different contexts. Early moderate vagal tone may reflect an optimal balance of regulation and arousal that helps prepare children to sympathize, comfort, and share with others. PMID:27819463

  8. Absenteeism movement in Greater Poland in 1840–1902

    Directory of Open Access Journals (Sweden)

    Izabela Krasińska


    Full Text Available The article presents the origins and development of the idea of absenteeism in Greater Poland in the 19th century. The start date for the research is 1840, which is considered to be a breakthrough year in the history of an organized absenteeism movement in Greater Poland. It was due to the Association for the Suppression of the Use of Vodka (Towarzystwo ku Przytłumieniu Używania Wódki in the Great Duchy of Posen that was then established in Kórnik. It was a secular organization that came into being on an initiative of doctor De La Roch, who was a German surgeon of a French origin. However, as early as 1844, the idea of absenteeism raised an interest of catholic clergymen of Greater Poland with high ranking clergy such as Rev. Leon Michał Przyłuski, Archbishop of Gniezno and Rev. Jan Kanty Dąbrowski, Archbishop of Posen, and later on Archbishops Rev. Mieczysław Halka Ledóchowski and Rev. Florian Oksza Stablewski. They were fascinated with activities of Rev. Jan Nepomucen Fick, Parish Priest of Piekary Śląskie and several other priests on whose initiative a lot of church brotherhoods of so called holy continence were set up in Upper Silesia as early as the first half-year of 1844. It was due to Bishop Dąbrowski that 100 000 people took vows of absenteeism in 1844–1845, becoming members of brotherhoods of absenteeism. In turn, it was an initiative of Archbishop Przyłuski that Jesuit missionaries – Rev. Karol Bołoz Antoniewicz, Rev. Teofil Baczyński and Rev. Kamil Praszałowicz, arrived in Greater Poland from Galicia in 1852 to promote the idea of absenteeism. Starting from 1848, they were helping Silesian clergymen to spread absenteeism. Clergymen of Greater Poland were also active in secular absenteeism associations. They became involved in the workings of the Association for the Promotion of Absenteeism that was set up by Zygmunt Celichowski in Kórnik in 1887, and especially in the Jutrzenka Absenteeism Association

  9. Gomphid DNA sequence data (United States)

    U.S. Environmental Protection Agency — DNA sequence data for several genetic loci. This dataset is not publicly accessible because: It's already publicly available on GenBank. It can be accessed through...

  10. Yeast genome sequencing:

    DEFF Research Database (Denmark)

    Piskur, Jure; Langkjær, Rikke Breinhold


    For decades, unicellular yeasts have been general models to help understand the eukaryotic cell and also our own biology. Recently, over a dozen yeast genomes have been sequenced, providing the basis to resolve several complex biological questions. Analysis of the novel sequence data has shown...... of closely related species helps in gene annotation and to answer how many genes there really are within the genomes. Analysis of non-coding regions among closely related species has provided an example of how to determine novel gene regulatory sequences, which were previously difficult to analyse because...... they are short and degenerate and occupy different positions. Comparative genomics helps to understand the origin of yeasts and points out crucial molecular events in yeast evolutionary history, such as whole-genome duplication and horizontal gene transfer(s). In addition, the accumulating sequence data provide...

  11. Dynamic Sequence Assignment. (United States)


    D-136 548 DYNAMIIC SEQUENCE ASSIGNMENT(U) ADVANCED INFORMATION AND 1/2 DECISION SYSTEMS MOUNTAIN YIELW CA C A 0 REILLY ET AL. UNCLSSIIED DEC 83 AI/DS...I ADVANCED INFORMATION & DECISION SYSTEMS Mountain View. CA 94040 84 u ,53 V,..’. Unclassified _____ SCURITY CLASSIFICATION OF THIS PAGE some important heuristic algorithms developed for fas- ter solution of the sequence assignment problem. 3.1. DINAMIC MOGRAMUNIG FORMULATION FOR

  12. HIV Sequence Compendium 2010

    Energy Technology Data Exchange (ETDEWEB)

    Kuiken, Carla [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Foley, Brian [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Leitner, Thomas [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Apetrei, Christian [Univ. of Pittsburgh, PA (United States); Hahn, Beatrice [Univ. of Alabama, Tuscaloosa, AL (United States); Mizrachi, Ilene [National Center for Biotechnology Information, Bethesda, MD (United States); Mullins, James [Univ. of Washington, Seattle, WA (United States); Rambaut, Andrew [Univ. of Edinburgh, Scotland (United Kingdom); Wolinsky, Steven [Northwestern Univ., Evanston, IL (United States); Korber, Bette [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    This compendium is an annual printed summary of the data contained in the HIV sequence database. In these compendia we try to present a judicious selection of the data in such a way that it is of maximum utility to HIV researchers. Each of the alignments attempts to display the genetic variability within the different species, groups and subtypes of the virus. This compendium contains sequences published before January 1, 2010. Hence, though it is called the 2010 Compendium, its contents correspond to the 2009 curated alignments on our website. The number of sequences in the HIV database is still increasing exponentially. In total, at the time of printing, there were 339,306 sequences in the HIV Sequence Database, an increase of 45% since last year. The number of near complete genomes (>7000 nucleotides) increased to 2576 by end of 2009, reflecting a smaller increase than in previous years. However, as in previous years, the compendium alignments contain only a small fraction of these. Included in the alignments are a small number of sequences representing each of the subtypes and the more prevalent circulating recombinant forms (CRFs) such as 01 and 02, as well as a few outgroup sequences (group O and N and SIV-CPZ). Of the rarer CRFs we included one representative each. A more complete version of all alignments is available on our website, Reprints are available from our website in the form of both HTML and PDF files. As always, we are open to complaints and suggestions for improvement. Inquiries and comments regarding the compendium should be addressed to

  13. General LTE Sequence


    Billal, Masum


    In this paper,we have characterized sequences which maintain the same property described in Lifting the Exponent Lemma. Lifting the Exponent Lemma is a very powerful tool in olympiad number theory and recently it has become very popular. We generalize it to all sequences that maintain a property like it i.e. if p^{\\alpha}||a_k and p^\\b{eta}||n, then p^{{\\alpha}+\\b{eta}}||a_{nk}.

  14. Pairwise Sequence Alignment Library

    Energy Technology Data Exchange (ETDEWEB)


    Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprint that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.

  15. The post-orgasmic prolactin increase following intercourse is greater than following masturbation and suggests greater satiety. (United States)

    Brody, Stuart; Krüger, Tillmann H C


    Research indicates that prolactin increases following orgasm are involved in a feedback loop that serves to decrease arousal through inhibitory central dopaminergic and probably peripheral processes. The magnitude of post-orgasmic prolactin increase is thus a neurohormonal index of sexual satiety. Using data from three studies of men and women engaging in masturbation or penile-vaginal intercourse to orgasm in the laboratory, we report that for both sexes (adjusted for prolactin changes in a non-sexual control condition), the magnitude of prolactin increase following intercourse is 400% greater than that following masturbation. The results are interpreted as an indication of intercourse being more physiologically satisfying than masturbation, and discussed in light of prior research reporting greater physiological and psychological benefits associated with coitus than with any other sexual activities.

  16. Field application of a multi-frequency acoustic instrument to monitor sediment for silt erosion study in Pelton turbine in Himalayan region, India (United States)

    Rai, A. K.; Kumar, A.; Hies, T.; Nguyen, H. H.


    High sediment load passing through hydropower components erodes the hydraulic components resulting in loss of efficiency, interruptions in power production and downtime for repair/maintenance, especially in Himalayan regions. The size and concentration of sediment play a major role in silt erosion. The traditional process of collecting samples manually to analyse in laboratory cannot suffice the need of monitoring temporal variation in sediment properties. In this study, a multi-frequency acoustic instrument was applied at desilting chamber to monitor sediment size and concentration entering the turbine. The sediment size and concentration entering the turbine were also measured with manual samples collected twice daily. The samples collected manually were analysed in laboratory with a laser diffraction instrument for size and concentration apart from analysis by drying and filtering methods for concentration. A conductivity probe was used to calculate total dissolved solids, which was further used in results from drying method to calculate suspended solid content of the samples. The acoustic instrument was found to provide sediment concentration values similar to drying and filtering methods. However, no good match was found between mean grain size from the acoustic method with the current status of development and laser diffraction method in the first field application presented here. The future versions of the software and significant sensitivity improvements of the ultrasonic transducers are expected to increase the accuracy in the obtained results. As the instrument is able to capture the concentration and in the future most likely more accurate mean grain size of the suspended sediments, its application for monitoring silt erosion in hydropower plant shall be highly useful.

  17. Structural diversity, its components and regenerating capacity of lesser Himalayan forests vegetation of Nikyal valley District Kotli (A.K), Pakistan. (United States)

    Amjad, Muhammad Shoaib; Arshad, Muhammad; Chaudhari, Sunbal Khalil


    To report the patterns of species diversity, and regenerating capacity in the forest of Nikyal valley in relation to environmental variables and underlying anthropogenic influence. A study area was selected in a traditionally managed mountain woody pasture during July 2012 to June 2013. The area was sampled by quadrat method. The quadrats were laid down at regular intervals of 150 m. The size of quadrats was kept 10×10, 5×5 and 1×1 m(2) for trees, shrubs and herbs respectively. Density, frequency and cover were recorded. Importance value index of each plant species was calculated and plant communities were named after the plant species having the highest IV. Then diversity, its components and regenerating capacity were calculated with their formulas. Shannon's diversity ranged from 2.75 to 3.31, Simpson's diversity, 0.90 to 0.95; Menhinick's diversity, 0.83 to 1.19; evenness, 0.41 to 0.65; species richness, 4.89 to 6.08 and maturity index, 30 to 44 species distribution pattern. Diversity values were similar to the other Himalayan forests. Pinus roxburghaii was the only regenerating species whereas the remaining four tree species including Qurecus dilatata regenerate up to 100 cm; they are at extreme risk of elimination due to anthropogenic factors. Nikyal valley is under severe deforestation pressure for fuel and timber value. There is an urgent need to promote the ethics among the people that improvement and conservation of natural resources are critical for land and soil management. Copyright © 2014 Hainan Medical College. Published by Elsevier B.V. All rights reserved.

  18. Current status of the traditional watermills of the Himalayan region and the need of technical improvements for increasing their energy efficiency

    International Nuclear Information System (INIS)

    Vashisht, A.K.


    Highlights: ► Analytical solutions for evaluating the traditional-watermill’s efficiency are derived. ► Blade surface modification from flat to circular-paraboloid increases efficiency by 7.51%. ► Water-jet angle alters the geometric dimensions of the blade due to abrasion. ► Replacement of chute with circular pipe increases the power generation by 0.366 kW. -- Abstract: Traditional watermills of the Himalayan region are centuries old water-power driven small-scale industry which is serving mountain inhabitants till date. But, day by day it is becoming tough for this eco-friendly technology to keep pace with modern technologies; hence its future is dubious now. Various organizations throughout the world are trying to rejuvenate and re-popularize this environment-friendly technology for multipurpose use. However, instead of improving its existing design, stress is being given to increase the adoptability of new-design watermill. In spite of all efforts, the new-design watermill has not shown any sharp impact on its adoptability rate. Certainly, there are issues which are not considered while implementing line of action. Before commencing the study, thorough discussions on the issues affecting the watermills’ existence in the region were made with the remotely residing watermill owners. Complete study is divided into two parts. In the first part, the issues that are deciding the fate of watermills’ existence in the region are discussed. Keeping all discussed-issues in mind, design of various components of an in-operation watermill is reviewed and modifications are proposed for increasing its efficiency. For the purpose, analytical expressions for evaluating watermill efficiency are also derived.

  19. Three-year observations of halocarbons at the Nepal Climate Observatory at Pyramid (NCO-P, 5079 m a.s.l.) on the Himalayan range (United States)

    Maione, M.; Giostra, U.; Arduini, J.; Furlani, F.; Bonasoni, P.; Cristofanelli, P.; Laj, P.; Vuillermoz, E.


    A monitoring programme for halogenated climate-altering gases has been established in the frame of the SHARE EV-K2-CNR project at the Nepal Climate Laboratory - Pyramid in the Himalayan range at the altitude of 5079 m a.s.l. The site is very well located to provide important insights on changes in atmospheric composition in a region that is of great significance for emissions of both anthropogenic and biogenic halogenated compounds. Measurements are performed since March 2006, with grab samples collected on a weekly basis. The first three years of data have been analysed. After the identification of the atmospheric background values for fourteen halocarbons, the frequency of occurrence of pollution events have been compared with the same kind of analysis for data collected at other global background stations. The analysis showed the fully halogenated species, whose production and consumption are regulated under the Montreal Protocol, show a significant occurrence of "above the baseline" values, as a consequence of their current use in the developing countries surrounding the region, meanwhile the hydrogenated gases, more recently introduced into the market, show less frequent spikes. Atmospheric concentration trends have been calculated as well, and they showed a fast increase, ranging from 5.7 to 12.6%, of all the hydrogenated species, and a clear decrease of methyl chloroform (-17.7%). The comparison with time series from other stations has also allowed to derive Meridional gradients, which are absent for long living well mixed species, while for the more reactive species, the gradient increases inversely with respect to their atmospheric lifetime. The effect of long range transport and of local events on the atmospheric composition at the station has been analysed as well, allowing the identification of relevant source regions the Northern half of the Indian sub-continent. Also, at finer spatial scales, a smaller, local contribution of forest fires from the

  20. Sunphotometry of the 2006-2007 aerosol optical/radiative properties at the Himalayan Nepal Climate Observatory-Pyramid (5079 m a.s.l.) (United States)

    Gobbi, G. P.; Angelini, F.; Bonasoni, P.; Verza, G. P.; Marinoni, A.; Barnaba, F.


    In spite of being located at the heart of the highest mountain range in the world, the Himalayan Nepal Climate Observatory (5079 m a.s.l.) at the Ev-K2-CNR Pyramid is shown to be affected by the advection of pollution aerosols from the populated regions of southern Nepal and the Indo-Gangetic plains. Such an impact is observed along most of the period April 2006-March 2007 addressed here, with a minimum in the monsoon season. Backtrajectory-analysis indicates long-range transport episodes occurring in this year to originate mainly in the west Asian deserts. At this high altitude site, the measured aerosol optical depth is observed to be about one order of magnitude lower than the one measured at Ghandi College (60 m a.s.l.), in the Indo-Gangetic basin. As for Ghandi College, and in agreement with the in situ ground observations at the Pyramid, the fine mode aerosol optical depth maximizes during winter and minimizes in the monsoon season. Conversely, total optical depth maximizes during the monsoon due to the occurrence of elevated, coarse particle layers. Possible origins of these particles are wind erosion from the surrounding peaks and hydrated/cloud-processed aerosols. Assessment of the aerosol radiative forcing is then expected to be hampered by the presence of these high altitude particle layers, which impede an effective, continuous measurement of anthropogenic aerosol radiative properties from sky radiance inversions and/or ground measurements alone. Even though the retrieved absorption coefficients of pollution aerosols were rather large (single scattering albedo of the order of 0.6-0.9 were observed in the month of April 2006), the corresponding low optical depths (~0.03 at 500 nm) are expected to limit the relevant radiative forcing. Still, the high specific forcing of this aerosol and its capability of altering snow surface albedo provide good reasons for continuous monitoring.

  1. Sunphotometry of the 2006–2007 aerosol optical/radiative properties at the Himalayan Nepal Climate Observatory-Pyramid (5079 m a.s.l.

    Directory of Open Access Journals (Sweden)

    G. P. Gobbi


    Full Text Available In spite of being located at the heart of the highest mountain range in the world, the Himalayan Nepal Climate Observatory (5079 m a.s.l. at the Ev-K2-CNR Pyramid is shown to be affected by the advection of pollution aerosols from the populated regions of southern Nepal and the Indo-Gangetic plains. Such an impact is observed along most of the period April 2006–March 2007 addressed here, with a minimum in the monsoon season. Backtrajectory-analysis indicates long-range transport episodes occurring in this year to originate mainly in the west Asian deserts. At this high altitude site, the measured aerosol optical depth is observed to be about one order of magnitude lower than the one measured at Ghandi College (60 m a.s.l., in the Indo-Gangetic basin. As for Ghandi College, and in agreement with the in situ ground observations at the Pyramid, the fine mode aerosol optical depth maximizes during winter and minimizes in the monsoon season. Conversely, total optical depth maximizes during the monsoon due to the occurrence of elevated, coarse particle layers. Possible origins of these particles are wind erosion from the surrounding peaks and hydrated/cloud-processed aerosols. Assessment of the aerosol radiative forcing is then expected to be hampered by the presence of these high altitude particle layers, which impede an effective, continuous measurement of anthropogenic aerosol radiative properties from sky radiance inversions and/or ground measurements alone. Even though the retrieved absorption coefficients of pollution aerosols were rather large (single scattering albedo of the order of 0.6–0.9 were observed in the month of April 2006, the corresponding low optical depths (~0.03 at 500 nm are expected to limit the relevant radiative forcing. Still, the high specific forcing of this aerosol and its capability of altering snow surface albedo provide good reasons for continuous monitoring.

  2. Dissipation kinetics of trifloxystrobin and tebuconazole on apple (Malus domestica) and soil--a multi location study from north western Himalayan region. (United States)

    Patyal, S K; Sharma, I D; Chandel, R S; Dubey, J K


    A new combinational fungicide formulation trifloxystrobin 25%+tebuconazole 50% (Nativo 75WG), introduced as a part of resistance management strategy, was studied for dissipation behaviour on apple fruits. Nativo 75WG was sprayed twice at the rate of 400 g and 800 g a.i. ha(-1) equal to trifloxystrobin application rate of 100 and 200 g a.i. ha(-1) and tebuconazole at application rate of 200 and 400 g a.i. ha(-1) at four different locations in the Northwest Himalayan region of India. The fruit samples collected at 10d interval and soil samples taken at harvest time were analyzed after second spray. The residual concentrations of trifloxystrobin, its acid metabolite CGA 321113 and tebuconazole were measured. Residues of both fungicides were determined by using gas chromatograph, Agilent 6890N having electron capture detector. The mean initial deposits of trifloxystrobin at four locations were found to be in the range of 0.333-0.387 mg kg(-1) and 0.512-0.714 mg kg(-1) at the application rate of 100 and 200 g a.i. ha(-1), and half-life were found between 19.38-24.93 d and 19.84-28.86 d at the respective doses. The Σ-trifloxystrobin and tebuconazole residues were below determination limit in 40 d apple fruits and soil samples. Initial deposits of trifloxystrobin and tebuconazole were below their Codex MRLs at the respective single doses. The half life value of the tebuconazole deposits ranged between 19.38-25.99 d and 19.84-28.86 d at the respective single and double dose. The study thus suggests 1d pre harvest interval for safe consumption of apple fruit after the application of Nativo 75 WG at single dose. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Isolation of phytase-producing bacteria from Himalayan soils and their effect on growth and phosphorus uptake of Indian mustard (Brassica juncea). (United States)

    Kumar, Vinod; Singh, Prashant; Jorquera, Milko A; Sangwan, Punesh; Kumar, Piyush; Verma, A K; Agrawal, Sanjeev


    Phytase-producing bacteria (PPB) is being investigated as plant growth promoting rhizobacteria (PGPR) to improve the phosphorus (P) nutrition and growth of plants grown in soil with high phytate content. Phytate is dominant organic P forms in many soils and must be hydrolyzed to be available for plants. Indian mustard (Brassica juncea) is a plant with economic importance in agriculture and phytoremediation, therefore biotechnological tools to improve growth and environmental stress tolerance are needed. In this study, we isolated and characterized PPB from Himalayan soils and evaluated their effect on growth and P uptake by B. juncea under greenhouse conditions. Sixty five PPB were isolated and based on phytate hydrolysis, three efficient PPB were chosen and identified as Acromobacter sp. PB-01, Tetrathiobacter sp. PB-03 and Bacillus sp. PB-13. Selected PPB showed ability to grow at wide range of pH, temperature and salt concentrations as well as to harbour diverse PGPR activities, such as: solubilization of insoluble Ca-phosphate (193-642 μg ml(-1)), production of phytohormone indole acetic acid (5-39 μg ml(-1)) and siderophore. Tetrathiobacter sp. PB-03 and Bacillus sp. PB-13 showed 50 and 70 % inhibition of phytopathogen Rhizoctonia solani, respectively. Greenhouse potting assay also showed that the bacterization of B. juncea seeds with Tetrathiobacter sp. PB-03 and Bacillus sp. PB-13 significantly increased the biomass and P content in 30 days old seedlings. This study reveals the potential of PPB as PGPR to improve the growth of B. juncea.

  4. Solid waste management in Indian Himalayan tourists' treks: a case study in and around the Valley of Flowers and Hemkund Sahib

    International Nuclear Information System (INIS)

    Kuniyal, Jagdish C.; Jain, Arun P.; Shannigrahi, Ardhendu S.


    Solid waste generation in sensitive tourist areas of the Indian Himalayan region is approaching that of some metro cities of the country. The present study showed ∼288 g waste generation visitor -1 day -1 compared with the nation-wide average of 350 g capita -1 day -1 . About 29 metric tonnes (MT) solid waste is generated along a distance of about 19-km trek (a stretch of land or distance between two or more places covered by a walk) during a 4-month tourist season every year. Treks and trek stalls are the two major places where the visitors generate solid waste. Waste estimated from stalls accounted for about 51% by weight of the total waste generation in the trekking region. The native villagers generally construct stalls every year to meet the requirement of visitors going to Valley of Flowers (VOF) and Hemkund Sahib. The average annual results of 2 years (or equivalent to the average of one, 4-month tourist season for the region) showed non-biodegradable waste (NBW) to be 96.3% by weight whereas biodegradable waste (BW) amounted to merely 3.7%. From management point of view of the government, 96% NBW could easily be reused and recycled. Nevertheless, the need is to manage this waste by bringing it from the trekking areas to the road head (Govind Ghat) first and then to transport it to adjacent recycling centers. Cold drink glass bottles (68%), plastic (26%) and metal (2%) were the major items contributing to non-biodegradable waste. The remaining organic waste could be used as feedstock for composting. A well coordinated effort of public participation is necessary at all the levels for managing waste. There is a need to educate the visitors to instill in them the habit of considering discarded waste as potentially valuable and manageable

  5. Men exhibit greater fatigue resistance than women in alternated bench press and leg press exercises. (United States)

    Monteiro, Estêvão R; Steele, James; Novaes, Jefferson S; Brown, Amanda F; Cavanaugh, Mark T; Vingren, Jakob L; Behm, David G


    The purpose of this study was to evaluate the influence of sex, exercise order, and rest interval on neuromuscular fatigue resistance for an alternated strength training sequence of bench press (BP) and leg press (LP) exercises. Twelve women and 16 men, both recreationally trained, performed four sessions in a random order: 1) BP followed by LP with three-minutes rest (BP+LP with rest), 2) LP followed by BP with three-minutes rest (LP+BP with rest), 3) BP followed by LP without rest interval (BP+LP no rest), and 4) LP followed by BP without rest interval (LP+BP no rest). Participants performed four sets with 100% of 10RM load to concentric failure with the goal of completing the maximum number of repetitions in both exercises. The fatigue index was analyzed from the first and last sets of each exercise bout. A main effect for sex showed that women exhibited 25.5% (p=0.001) and 24.5% (p=0.001) greater BP and LP fatigue than men respectively when performing 10RM. Men exhibited greater BP (p<0.0001; 34.1%) and LP (p<0.0001; 30.5%) fatigue resistance when a rest period was provided. Men did not show an exercise order effect for BP fatigue and exhibited greater (p=0.0003; 14.5%) LP fatigue resistance when BP was performed first. The present study demonstrated the greater fatigue resistance of men when performing 10RM BP and LP exercises. Since men tend to experience less fatigue with the second exercise in the exercise pairing, women's training programs should be adjusted to ensure they do not parallel men's resistance training programs.

  6. Versatility of cooperative transcriptional activation: a thermodynamical modeling analysis for greater-than-additive and less-than-additive effects.

    Directory of Open Access Journals (Sweden)

    Till D Frank

    Full Text Available We derive a statistical model of transcriptional activation using equilibrium thermodynamics of chemical reactions. We examine to what extent this statistical model predicts synergy effects of cooperative activation of gene expression. We determine parameter domains in which greater-than-additive and less-than-additive effects are predicted for cooperative regulation by two activators. We show that the statistical approach can be used to identify different causes of synergistic greater-than-additive effects: nonlinearities of the thermostatistical transcriptional machinery and three-body interactions between RNA polymerase and two activators. In particular, our model-based analysis suggests that at low transcription factor concentrations cooperative activation cannot yield synergistic greater-than-additive effects, i.e., DNA transcription can only exhibit less-than-additive effects. Accordingly, transcriptional activity turns from synergistic greater-than-additive responses at relatively high transcription factor concentrations into less-than-additive responses at relatively low concentrations. In addition, two types of re-entrant phenomena are predicted. First, our analysis predicts that under particular circumstances transcriptional activity will feature a sequence of less-than-additive, greater-than-additive, and eventually less-than-additive effects when for fixed activator concentrations the regulatory impact of activators on the binding of RNA polymerase to the promoter increases from weak, to moderate, to strong. Second, for appropriate promoter conditions when activator concentrations are increased then the aforementioned re-entrant sequence of less-than-additive, greater-than-additive, and less-than-additive effects is predicted as well. Finally, our model-based analysis suggests that even for weak activators that individually induce only negligible increases in promoter activity, promoter activity can exhibit greater

  7. Sexual predators, energy development, and conservation in greater Yellowstone. (United States)

    Berger, Joel; Beckmann, Jon P


    In the United States, as elsewhere, a growing debate pits national energy policy and homeland security against biological conservation. In rural communities the extraction of fossil fuels is often encouraged because of the employment opportunities it offers, although the concomitant itinerant workforce is often associated with increased wildlife poaching. We explored possible positive and negative factors associated with energy extraction in the Greater Yellowstone Ecosystem (GYE), an area known for its national parks, intact biological diversity, and some of the New World's longest terrestrial migrations. Specifically, we asked whether counties with different economies-recreation (ski), agrarian (ranching or farming), and energy extractive (petroleum)-differed in healthcare (gauged by the abundance of hospital beds) and in the frequency of sexual predators. The absolute and relative frequency of registered sex offenders grew approximately two to three times faster in areas reliant on energy extraction. Healthcare among counties did not differ. The strong conflation of community dishevel, as reflected by in-migrant sexual predators, and ecological decay in Greater Yellowstone is consistent with patterns seen in similar systems from Ecuador to northern Canada, where social and environmental disarray exist around energy boomtowns. In our case, that groups (albeit with different aims) mobilized campaigns to help maintain the quality of rural livelihoods by protecting open space is a positive sign that conservation can matter, especially in the face of rampant and poorly executed energy extraction projects. Our findings further suggest that the public and industry need stronger regulatory action to instill greater vigilance when and where social factors and land conversion impact biological systems.

  8. Land cover mapping of Greater Mesoamerica using MODIS data (United States)

    Giri, Chandra; Jenkins, Clinton N.


    A new land cover database of Greater Mesoamerica has been prepared using moderate resolution imaging spectroradiometer (MODIS, 500 m resolution) satellite data. Daily surface reflectance MODIS data and a suite of ancillary data were used in preparing the database by employing a decision tree classification approach. The new land cover data are an improvement over traditional advanced very high resolution radiometer (AVHRR) based land cover data in terms of both spatial and thematic details. The dominant land cover type in Greater Mesoamerica is forest (39%), followed by shrubland (30%) and cropland (22%). Country analysis shows forest as the dominant land cover type in Belize (62%), Cost Rica (52%), Guatemala (53%), Honduras (56%), Nicaragua (53%), and Panama (48%), cropland as the dominant land cover type in El Salvador (60.5%), and shrubland as the dominant land cover type in Mexico (37%). A three-step approach was used to assess the quality of the classified land cover data: (i) qualitative assessment provided good insight in identifying and correcting gross errors; (ii) correlation analysis of MODIS- and Landsat-derived land cover data revealed strong positive association for forest (r2 = 0.88), shrubland (r2 = 0.75), and cropland (r2 = 0.97) but weak positive association for grassland (r2 = 0.26); and (iii) an error matrix generated using unseen training data provided an overall accuracy of 77.3% with a Kappa coefficient of 0.73608. Overall, MODIS 500 m data and the methodology used were found to be quite useful for broad-scale land cover mapping of Greater Mesoamerica.

  9. Practicing more retrieval routes leads to greater memory retention. (United States)

    Zheng, Jun; Zhang, Wei; Li, Tongtong; Liu, Zhaomin; Luo, Liang


    A wealth of research has shown that retrieval practice plays a significant role in improving memory retention. The current study focused on one simple yet rarely examined question: would repeated retrieval using two different retrieval routes or using the same retrieval route twice lead to greater long-term memory retention? Participants elaborately learned 22 Japanese-Chinese translation word pairs using two different mediators. Half an hour after the initial study phase, the participants completed two retrieval sessions using either one mediator (Tm1Tm1) or two different mediators (Tm1Tm2). On the final test, which was performed 1week after the retrieval practice phase, the participants received only the cue with a request to report the mediator (M1 or M2) followed by the target (Experiment 1) or only the mediator (M1 or M2) with a request to report the target (Experiment 2). The results of Experiment 1 indicated that the participants who practiced under the Tm1Tm2 condition exhibited greater target retention than those who practiced under the Tm1Tm1 condition. This difference in performance was due to the significant disadvantage in mediator retrieval and decoding of the unpracticed mediator under the Tm1Tm1 condition. Although mediators were provided to participants on the final test in Experiment 2, decoding of the unpracticed mediators remained less effective than decoding of the practiced mediators. We conclude that practicing multiple retrieval routes leads to greater memory retention than focusing on a single retrieval route. Thus, increasing retrieval variability during repeated retrieval practice indeed significantly improves long-term retention in a delay test. Copyright © 2016 Elsevier B.V. All rights reserved.

  10. Taino and African maternal heritage in the Greater Antilles. (United States)

    Bukhari, Areej; Luis, Javier Rodriguez; Alfonso-Sanchez, Miguel A; Garcia-Bertrand, Ralph; Herrera, Rene J


    Notwithstanding the general interest and the geopolitical importance of the island countries in the Greater Antilles, little is known about the specific ancestral Native American and African populations that settled them. In an effort to alleviate this lacuna of information on the genetic constituents of the Greater Antilles, we comprehensively compared the mtDNA compositions of Cuba, Dominican Republic, Haiti, Jamaica and Puerto Rico. To accomplish this, the mtDNA HVRI and HVRII regions, as well as coding diagnostic sites, were assessed in the Haitian general population and compared to data from reference populations. The Taino maternal DNA is prominent in the ex-Spanish colonies (61.3%-22.0%) while it is basically non-existent in the ex-French and ex-English colonies of Haiti (0.0%) and Jamaica (0.5%), respectively. The most abundant Native American mtDNA haplogroups in the Greater Antilles are A2, B2 and C1. The African mtDNA component is almost fixed in Haiti (98.2%) and Jamaica (98.5%), and the frequencies of specific African haplogroups vary considerably among the five island nations. The strong persistence of Taino mtDNA in the ex-Spanish colonies (and especially in Puerto Rico), and its absence in the French and English excolonies is likely the result of different social norms regarding mixed marriages with Taino women during the early years after the first contact with Europeans. In addition, this article reports on the results of an integrative approach based on mtDNA analysis and demographic data that tests the hypothesis of a southward shift in raiding zones along the African west coast during the period encompassing the Transatlantic Slave Trade. Copyright © 2017 Elsevier B.V. All rights reserved.

  11. Threatened species richness along a Himalayan elevational gradient: quantifying the influences of human population density, range size, and geometric constraints. (United States)

    Paudel, Prakash Kumar; Sipos, Jan; Brodie, Jedediah F


    A crucial step in conserving biodiversity is to identify the distributions of threatened species and the factors associated with species threat status. In the biodiversity hotspot of the Himalaya, very little is known about which locations harbour the highest diversity of threatened species and whether diversity of such species is related to area, mid-domain effects (MDE), range size, or human density. In this study, we assessed the drivers of variation in richness of threatened birds, mammals, reptiles, actinopterygii, and amphibians along an elevational gradient in Nepal Himalaya. Although geometric constraints (MDE), species range size, and human population density were significantly related to threatened species richness, the interaction between range size and human population density was of greater importance. Threatened species richness was positively associated with human population density and negatively associated with range size. In areas with high richness of threatened species, species ranges tend to be small. The preponderance of species at risk of extinction at low elevations in the subtropical biodiversity hotspot could be due to the double impact of smaller range sizes and higher human density.

  12. Absorption spectrum of DNA for wavelengths greater than 300 nm

    International Nuclear Information System (INIS)

    Sutherland, J.C.; Griffin, K.P.


    Although DNA absorption at wavelengths greater than 300 nm is much weaker than that at shorter wavelengths, this absorption seems to be responsible for much of the biological damage caused by solar radiation of wavelengths less than 320 nm. Accurate measurement of the absorption spectrum of DNA above 300 nm is complicated by turbidity characteristic of concentrated solutions of DNA. We have measured the absorption spectra of DNA from calf thymus, Clostridium perfringens, Escherichia coli, Micrococcus luteus, salmon testis, and human placenta using procedures which separate optical density due to true absorption from that due to turbidity. Above 300 nm, the relative absorption of DNA increases as a function of guanine-cytosine content, presumably because the absorption of guanine is much greater than the absorption of adenine at these wavelengths. This result suggests that the photophysical processes which follow absorption of a long-wavelength photon may, on the average, differ from those induced by shorter-wavelength photons. It may also explain the lower quantum yield for the killing of cells by wavelengths above 300 nm compared to that by shorter wavelengths

  13. Black breast cancer survivors experience greater upper extremity disability. (United States)

    Dean, Lorraine T; DeMichele, Angela; LeBlanc, Mously; Stephens-Shields, Alisa; Li, Susan Q; Colameco, Chris; Coursey, Morgan; Mao, Jun J


    Over one-third of breast cancer survivors experience upper extremity disability. Black women present with factors associated with greater upper extremity disability, including: increased body mass index (BMI), more advanced disease stage at diagnosis, and varying treatment type compared with Whites. No prior research has evaluated the relationship between race and upper extremity disability using validated tools and controlling for these factors. Data were drawn from a survey study among 610 women with stage I-III hormone receptor positive breast cancer. The disabilities of the arm, shoulder and hand (QuickDASH) is an 11-item self-administered questionnaire that has been validated for breast cancer survivors to assess global upper extremity function over the past 7 days. Linear regression and mediation analysis estimated the relationships between race, BMI and QuickDASH score, adjusting for demographics and treatment types. Black women (n = 98) had 7.3 points higher average QuickDASH scores than White (n = 512) women (p disability by 40 %. Even several years post-treatment, Black breast cancer survivors had greater upper extremity disability, which was partially mediated by higher BMIs. Close monitoring of high BMI Black women may be an important step in reducing disparities in cancer survivorship. More research is needed on the relationship between race, BMI, and upper extremity disability.

  14. Greater-confinement disposal of low-level radioactive wastes

    International Nuclear Information System (INIS)

    Trevorrow, L.E.; Gilbert, T.L.; Luner, C.; Merry-Libby, P.A.; Meshkov, N.K.; Yu, C.


    Low-level radioactive wastes include a broad spectrum of wastes that have different radionuclide concentrations, half-lives, and physical and chemical properties. Standard shallow-land burial practice can provide adequate protection of public health and safety for most low-level wastes, but a small volume fraction (about 1%) containing most of the activity inventory (approx.90%) requires specific measures known as ''greater-confinement disposal'' (GCD). Different site characteristics and different waste characteristics - such as high radionuclide concentrations, long radionuclide half-lives, high radionuclide mobility, and physical or chemical characteristics that present exceptional hazards - lead to different GCD facility design requirements. Facility design alternatives considered for GCD include the augered shaft, deep trench, engineered structure, hydrofracture, improved waste form, and high-integrity container. Selection of an appropriate design must also consider the interplay between basic risk limits for protection of public health and safety, performance characteristics and objectives, costs, waste-acceptance criteria, waste characteristics, and site characteristics. This paper presents an overview of the factors that must be considered in planning the application of methods proposed for providing greater confinement of low-level wastes. 27 refs

  15. Adaptive Processing for Sequence Alignment

    KAUST Repository

    Zidan, Mohammed A.; Bonny, Talal; Salama, Khaled N.


    Disclosed are various embodiments for adaptive processing for sequence alignment. In one embodiment, among others, a method includes obtaining a query sequence and a plurality of database sequences. A first portion of the plurality of database sequences is distributed to a central processing unit (CPU) and a second portion of the plurality of database sequences is distributed to a graphical processing unit (GPU) based upon a predetermined splitting ratio associated with the plurality of database sequences, where the database sequences of the first portion are shorter than the database sequences of the second portion. A first alignment score for the query sequence is determined with the CPU based upon the first portion of the plurality of database sequences and a second alignment score for the query sequence is determined with the GPU based upon the second portion of the plurality of database sequences.

  16. Adaptive Processing for Sequence Alignment

    KAUST Repository

    Zidan, Mohammed A.


    Disclosed are various embodiments for adaptive processing for sequence alignment. In one embodiment, among others, a method includes obtaining a query sequence and a plurality of database sequences. A first portion of the plurality of database sequences is distributed to a central processing unit (CPU) and a second portion of the plurality of database sequences is distributed to a graphical processing unit (GPU) based upon a predetermined splitting ratio associated with the plurality of database sequences, where the database sequences of the first portion are shorter than the database sequences of the second portion. A first alignment score for the query sequence is determined with the CPU based upon the first portion of the plurality of database sequences and a second alignment score for the query sequence is determined with the GPU based upon the second portion of the plurality of database sequences.

  17. Mobile carbohydrates in Himalayan treeline trees I. Evidence for carbon gain limitation but not for growth limitation. (United States)

    Li, Mai-He; Xiao, Wen-Fa; Wang, San-Gen; Cheng, Gen-Wei; Cherubini, Paolo; Cai, Xaio-Hu; Liu, Xing-Liang; Wang, Xiao-Dan; Zhu, Wan-Ze


    To test whether the altitudinal distribution of trees is determined by a carbon shortage or an insufficient sugar fraction (sugar:starch ratio) in treeline trees, we studied the status of nonstructural carbohydrates (NSC) and their components (total soluble sugars and starch) in Abies fabri (Mast.) Craib and Picea balfouriana var. hirtella Rehd. et Wils. trees along three elevational gradients, ranging from lower elevations to the alpine treeline, on the eastern edge of the Tibetan Plateau. For comparison, we investigated a low-altitude species (Tsuga yunnanensis (Franch.) Pritz.) which served as a warm-climate reference because it is distributed in closed montane forests below 3100 m a.s.l. in the study area. The carbon status of T. yunnanensis responded to altitude differently from that of the treeline species. At the species level, total NSC was not consistently more abundant in treeline trees than in trees of the same species growing at lower elevations. Thus there was no consistent evidence for carbon limitation of growth in treeline trees. For the three treeline species studied (P. balfouriana and A. fabri in the Kang-Ding Valley and A. fabri in the Mo-Xi Valley), winter NSC concentrations in treeline trees were significantly lower than in lower-elevation trees of the same species, suggesting that, in winter, carbon is limited in treeline trees. However, in no case was there total overwinter depletion of NSC or its components in treeline trees. Treeline and low-altitude species had similar sugar:starch ratios of about three at their upper-elevational limits in April. We conclude that survival and growth of trees at the elevational or latitudinal climate limit depend not only on NSC concentration in perennial tissues, but also on the maintenance of an overwintering sugar:starch ratio greater than three.

  18. [Clinical Results of Endoscopic Treatment of Greater Trochanteric Pain Syndrome]. (United States)

    Zeman, P; Rafi, M; Skala, P; Zeman, J; Matějka, J; Pavelka, T


    PURPOSE OF THE STUDY This retrospective study aims to present short-term clinical outcomes of endoscopic treatment of patients with greater trochanteric pain syndrome (GTPS). MATERIAL AND METHODS The evaluated study population was composed of a total of 19 patients (16 women, 3 men) with the mean age of 47 years (19-63 years). In twelve cases the right hip joint was affected, in the remaining seven cases it was the left side. The retrospective evaluation was carried out only in patients with greater trochanteric pain syndrome caused by independent chronic trochanteric bursitis without the presence of m. gluteus medius tear not responding to at least 3 months of conservative treatment. In patients from the followed-up study population, endoscopic trochanteric bursectomy was performed alone or in combination with iliotibial band release. The clinical results were evaluated preoperatively and with a minimum follow-up period of 1 year after the surgery (mean 16 months). The Visual Analogue Scale (VAS) for assessment of pain and WOMAC (Western Ontario MacMaster) score were used. In both the evaluated criteria (VAS and WOMAC score) preoperative and postoperative results were compared. Moreover, duration of surgery and presence of postoperative complications were assessed. Statistical evaluation of clinical results was carried out by an independent statistician. In order to compare the parameter of WOMAC score and VAS pre- and post-operatively the Mann-Whitney Exact Test was used. The statistical significance was set at 0.05. RESULTS The preoperative VAS score ranged 5-9 (mean 7.6) and the postoperative VAS ranged 0-5 (mean 2.3). The WOMAC score ranged 56.3-69.7 (mean 64.2) preoperatively and 79.8-98.3 (mean 89.7) postoperatively. When both the evaluated parameters of VAS and WOMAC score were compared in time, a statistically significant improvement (ppain syndrome yields statistically significant improvement of clinical results with the concurrent minimum incidence of

  19. Waiting Time Distributions for Pattern Occurrence in a Constrained Sequence

    Directory of Open Access Journals (Sweden)

    Valeri Stefanov


    Full Text Available A binary sequence of zeros and ones is called a (d,k-sequence if it does not contain runs of zeros of length either less than d or greater than k, where d and k are arbitrary, but fixed, non-negative integers and d < k. Such sequences find an abundance of applications in communications, in particular for magnetic and optical recording. Occasionally, one requires that (d,k-sequences do not contain a specific pattern w. Therefore, distribution results concerning pattern occurrence in (d,k-sequences are of interest. In this paper we study the distribution of the waiting time until the r th occurrence of a pattern w in a random (d,k-sequence generated by a Markov source. Numerical examples are also provided.

  20. Main sequence mass loss

    International Nuclear Information System (INIS)

    Brunish, W.M.; Guzik, J.A.; Willson, L.A.; Bowen, G.


    It has been hypothesized that variable stars may experience mass loss, driven, at least in part, by oscillations. The class of stars we are discussing here are the δ Scuti variables. These are variable stars with masses between about 1.2 and 2.25 M/sub θ/, lying on or very near the main sequence. According to this theory, high rotation rates enhance the rate of mass loss, so main sequence stars born in this mass range would have a range of mass loss rates, depending on their initial rotation velocity and the amplitude of the oscillations. The stars would evolve rapidly down the main sequence until (at about 1.25 M/sub θ/) a surface convection zone began to form. The presence of this convective region would slow the rotation, perhaps allowing magnetic braking to occur, and thus sharply reduce the mass loss rate. 7 refs

  1. Strontium isotopic geochemistry of intrusive rocks, Puerto Rico, Greater Antilles

    International Nuclear Information System (INIS)

    Jones, L.M.; Kesler, S.E.


    The strontium isotope geochemistry is given for three Puerto Rican intrusive rocks: the granodioritic Morovis and San Lorenzo plutons and the Rio Blanco stock of quartz dioritic composition. The average calculated initial 87 Sr/ 86 Sr ratios are 0.70370, 0.70355 and 0.70408, respectively. In addition, the San Lorenzo data establish a whole-rock isochron of 71 +- 2 m.y., which agrees with the previously reported K-Ar age of 73 m.y. Similarity of most of the intrusive rocks in the Greater Antilles with respect to their strontium isotopic geochemistry regardless of their major element composition indicates that intrusive magmas with a wide range of composition can be derived from a single source material. The most likely source material, in view of the available isotopic data, is the mantle wedge overlying the subduction zone. (orig.)

  2. Slimness is associated with greater intercourse and lesser masturbation frequency. (United States)

    Brody, Stuart


    I examined the relationship of recalled and diary recorded frequency of penile-vaginal intercourse (FSI), noncoital partnered sexual activity, and masturbation to measured waist and hip circumference in 120 healthy adults aged 19-38. Slimmer waist (in men and in the sexes combined) and slimmer hips (in men and women) were associated with greater FSI. Slimmer waist and hips were associated with rated importance of intercourse for men. Noncoital partnered sexual activity had a less consistent association with slimness. Slimmer waist and hips were associated with less masturbation (in men and in the sexes combined). I discuss the results in terms of differences between different sexual behaviors, attractiveness, emotional relatedness, physical sensitivity, sexual dysfunction, sociobiology, psychopharmacological aspects of excess fat and carbohydrate consumption, and implications for sex therapy.

  3. ADR characteristics and corporate governance in the Greater China region

    Directory of Open Access Journals (Sweden)

    Lee-Hsien Pan


    Full Text Available We examine the relationship between firm valuation and governance mechanisms, firm characteristics, and institutional factors of the American Depository Receipts (ADRs domiciled in the Greater China region. We find that China ADRs have the highest market-to-book value ratio followed by Hong Kong and Taiwan ADRs. It appears that Chinese firms with the poorest external governance environment stand to benefit the most from cross listing under the ADR programs. Listing in the U.S. that requires more stringent regulations and disclosure rules may strengthen the firms’ governance practices and thereby enhance their firm value. Among the internal governance mechanisms, institutional ownership and insider ownership are important for firm value.

  4. Greater confinement disposal program at the Savannah River Plant

    International Nuclear Information System (INIS)

    Cook, J.R.; Towler, O.A.; Peterson, D.L.; Johnson, G.M.; Helton, B.D.


    The first facility to demonstrate Greater Confinement Disposal (GCD) in a humid environment in the United States has been built and is operating at the Savannah River Plant. GCD practices of waste segregation, packaging, emplacement below the root zone, and waste stabilization are being used in the demonstration. Activity concentrations to select wastes for GCD are based on a study of SRP burial records, and are equal to or less than those for Class B waste in 10CFR61. The first disposal units to be constructed are 9-foot diameter, thirty-foot deep boreholes which will be used to dispose of wastes from production reactors, tritiated wastes, and selected wastes from off-site. In 1984 an engineered GCD trench will be constructed for disposal of boxed wastes and large bulky items. 2 figures, 1 table

  5. Greater Confinement Disposal Program at the Savannah River Plant

    International Nuclear Information System (INIS)

    Towler, O.A.; Cook, J.R.; Peterson, D.L.


    Plans for improved LLW disposal at the Savannah River Plant include Greater Confinement Disposal (GCD) for the higher activity fractions of this waste. GCD practices will include waste segregation, packaging, emplacement below the root zone, and stabilizing the emplacement with cement. Statistical review of SRP burial records showed that about 95% of the radioactivity is associated with only 5% of the waste volume. Trigger values determined in this study were compared with actual burials in 1982 to determine what GCD facilities would be needed for a demonstration to begin in Fall 1983. Facilities selected include 8-feet-diameter x 30-feet-deep boreholes to contain reactor scrap, tritiated waste, and selected wastes from offsite

  6. Evil genius? How dishonesty can lead to greater creativity. (United States)

    Gino, Francesca; Wiltermuth, Scott S


    We propose that dishonest and creative behavior have something in common: They both involve breaking rules. Because of this shared feature, creativity may lead to dishonesty (as shown in prior work), and dishonesty may lead to creativity (the hypothesis we tested in this research). In five experiments, participants had the opportunity to behave dishonestly by overreporting their performance on various tasks. They then completed one or more tasks designed to measure creativity. Those who cheated were subsequently more creative than noncheaters, even when we accounted for individual differences in their creative ability (Experiment 1). Using random assignment, we confirmed that acting dishonestly leads to greater creativity in subsequent tasks (Experiments 2 and 3). The link between dishonesty and creativity is explained by a heightened feeling of being unconstrained by rules, as indicated by both mediation (Experiment 4) and moderation (Experiment 5).

  7. Use of renewable energy in the greater metropolitan area

    International Nuclear Information System (INIS)

    Arias Garcia, Rocio; Castro Gomez, Gustavo; Fallas Cordero, Kenneth; Grant Chaves, Samuel; Mendez Parrales, Tony; Parajeles Fernandez, Ivan


    A study is conducted on different renewable energy within the larger metropolitan area, selecting the most suitable for the area and the implementation for distributed generation. A research methodology is practiced type pretending gather the necessary information to make proposals selected of different type of energy. The geography of the greater metropolitan area is studied along with the different existing renewable energy: distributed generation, remote measurement of energy which is one of the elements of the concept of intelligent networks (Smart Grid) in the electricity sector, legislation of Costa Rica regarding the generation of renewable energy and environmental impact. An analysis of economic feasibility is covered for each of the proposals estimating current rates for leading distributors of a future value, concluding with the viability of projects for possible execution of the same. (author) [es

  8. The hydrogen village in the Greater Toronto Area (GTA)

    International Nuclear Information System (INIS)

    Kimmel, T.B.; Smith, R.


    'Full text:' A Hydrogen Village (H2V) is a public/private partnership with an objective to accelerate the commercialization of hydrogen and fuel cell technology in Canada and firmly position Canada as the international leader in this sector. The first Hydrogen Village is planned for the Greater Toronto Area (GTA) and will make use of existing hydrogen and fuel cell deployments to assist in its creation. This five year GTA Hydrogen Village program is planned to begin operations in 2004. The Hydrogen Village will demonstrate and deploy various hydrogen production and delivery techniques as well as fuel cells for stationary, transportation (mobile) and portable applications. This paper will provide an overview of the Hydrogen Village and identify the missions, objectives, members and progress within the H2V. (author)

  9. Age and Expatriate Job Performance in Greater China

    DEFF Research Database (Denmark)

    Selmer, Jan; Lauring, Jakob; Feng, Yunxia


    a positive impact on expatriates' job performance. Therefore, the purpose of this paper is toexamine the association between the age of business expatriates and their work performance in a Chinese cultural setting. Design/methodology/approach - Controlling for the potential bias of a number of background......, companies should not discriminate against older candidatesin expatriate selection for Greater China. Furthermore, older expatriates destined for a Chinesecultural context could be trained how to exploit their age advantage. Originality/value - In contrast to previous studies, this investigation attempts...... to match a certain personal characteristic of expatriates with a specific host culture. The results have implications for and contribute to the literature on expatriate selection as well as to the body of research on crosscultural training....

  10. The Greater Caucasus Glacier Inventory (Russia, Georgia and Azerbaijan) (United States)

    Tielidze, Levan G.; Wheate, Roger D.


    There have been numerous studies of glaciers in the Greater Caucasus, but none that have generated a modern glacier database across the whole mountain range. Here, we present an updated and expanded glacier inventory at three time periods (1960, 1986, 2014) covering the entire Greater Caucasus. Large-scale topographic maps and satellite imagery (Corona, Landsat 5, Landsat 8 and ASTER) were used to conduct a remote-sensing survey of glacier change, and the 30 m resolution Advanced Spaceborne Thermal Emission and Reflection Radiometer Global Digital Elevation Model (ASTER GDEM; 17 November 2011) was used to determine the aspect, slope and height distribution of glaciers. Glacier margins were mapped manually and reveal that in 1960 the mountains contained 2349 glaciers with a total glacier surface area of 1674.9 ± 70.4 km2. By 1986, glacier surface area had decreased to 1482.1 ± 64.4 km2 (2209 glaciers), and by 2014 to 1193.2 ± 54.0 km2 (2020 glaciers). This represents a 28.8 ± 4.4 % (481 ± 21.2 km2) or 0.53 % yr-1 reduction in total glacier surface area between 1960 and 2014 and an increase in the rate of area loss since 1986 (0.69 % yr-1) compared to 1960-1986 (0.44 % yr-1). Glacier mean size decreased from 0.70 km2 in 1960 to 0.66 km2 in 1986 and to 0.57 km2 in 2014. This new glacier inventory has been submitted to the Global Land Ice Measurements from Space (GLIMS) database and can be used as a basis data set for future studies.

  11. Myiasis in Dogs in the Greater Accra Region of Ghana. (United States)

    Johnson, Sherry A M; Gakuya, Daniel W; Mbuthia, Paul G; Mande, John D; Afakye, Kofi; Maingi, Ndichu


    Myiasis is the infestation of tissues of live vertebrate animals and humans with dipterous larvae. In sub-Saharan Africa, Cordylobia anthropohaga and Cordylobia rodhaini are known to be responsible for cutaneous myiasis in animals and humans. Human cases of myiasis, purportedly acquired in Ghana but diagnosed in other countries, have been reported; however, published data on its occurrence in animals in Ghana is unavailable. This study assessed the prevalence of canine myiasis among owned dogs in the Greater Accra region (GAR) of Ghana. A cross-sectional study was conducted in the Greater Accra region of Ghana, selected for being the region with the highest estimated population density of owned dogs. Physical examination and demographic characteristics of the study dogs were assessed. Management of the dogs was assessed through a questionnaire administered to the dog owners. A total of 392 owned dogs were sampled. Twenty-nine (7.4%) had cutaneous myiasis caused by C. rodhaini. In addition, one (0.2%) of the dogs had intestinal myiasis, with Dermatobia hominis as the offending larvae. Among the breeds of dogs with myiasis, the mongrel was most affected, with 24 (82.8%) out of the 29 cases. The mongrels, majority of which (24; 82.8%) were males, were left to roam freely in the community. Results from this study demonstrate that C. rodhaini and D. hominis are important causes of myiasis in owned dogs in the GAR of Ghana. Dogs could play a role in the spread of myiasis to humans, with its attendant public health implications.

  12. Economic and geographic factors affecting the development of Greater Baku

    Directory of Open Access Journals (Sweden)



    Full Text Available Globally, the responsible factors for the ongoing development of urbanization are the high speed of population growth, and the mass migration of humans to cities and large urban areas. In most countries, this process resulted in the emergence of ‘pseudo-urbanization’ which is difficult to be regulated. The purpose of the carried researches to determine the development priorities in the territory of Greater Baku – the capital city of the Republic of Azerbaijan; to define the problems that take place in this connection; and to develop ways of elimination of these problems. The reason of taking Baku as a research area is connected with some of the factors. Firstly, studies on Baku have been conducted based on the Soviet geographical and urban planning school and their methods for a long period. In this regard, it is necessary to carry out research in this field based on the principles adopted in most countries. Secondly, since 1992, the intensive accumulation of population in the territory of the capital city and the surrounding areas is being observed because of socio-economic problems. As a result, the process of pseudo-urbanization intensified, entailing a densely-populated area. Thirdly, low-rise buildings still continue to exist in the large areas within the territory of Baku, and they are not associated with the functional structure of the city. This situation creates many challenges, particularly in terms of density growth and effective use of the city’s territory. Finally, numerous new buildings have been constructed in the residential areas of Baku in recent years, and this may entailserious problems in water supply, energy provision, and utilities. The study is carried out referring to previous works of researchers, statistic data, and the results of the population census conducted in 1959-2009.The practical significance of the scientific work is that positive and negative factors affecting the further development of Greater Baku

  13. Greater learnability is not sufficient to produce cultural universals. (United States)

    Rafferty, Anna N; Griffiths, Thomas L; Ettlinger, Marc


    Looking across human societies reveals regularities in the languages that people speak and the concepts that they use. One explanation that has been proposed for these "cultural universals" is differences in the ease with which people learn particular languages and concepts. A difference in learnability means that languages and concepts possessing a particular property are more likely to be accurately transmitted from one generation of learners to the next. Intuitively, this difference could allow languages and concepts that are more learnable to become more prevalent after multiple generations of cultural transmission. If this is the case, the prevalence of languages and concepts with particular properties can be explained simply by demonstrating empirically that they are more learnable. We evaluate this argument using mathematical analysis and behavioral experiments. Specifically, we provide two counter-examples that show how greater learnability need not result in a property becoming prevalent. First, more learnable languages and concepts can nonetheless be less likely to be produced spontaneously as a result of transmission failures. We simulated cultural transmission in the laboratory to show that this can occur for memory of distinctive items: these items are more likely to be remembered, but not generated spontaneously once they have been forgotten. Second, when there are many languages or concepts that lack the more learnable property, sheer numbers can swamp the benefit produced by greater learnability. We demonstrate this using a second series of experiments involving artificial language learning. Both of these counter-examples show that simply finding a learnability bias experimentally is not sufficient to explain why a particular property is prevalent in the languages or concepts used in human societies: explanations for cultural universals based on cultural transmission need to consider the full set of hypotheses a learner could entertain and all of

  14. Greater occipital nerve infiltration under MR guidance. Feasibility study and preliminary results

    International Nuclear Information System (INIS)

    Kastler, Adrian; Perolat, Romain; Kastler, Bruno; Maindet-Dominici, Caroline; Fritz, Jan; Benabid, Alim Louis; Chabardes, Stephan; Krainik, Alexandre


    To assess the feasibility of greater occipital nerve (GON) intermediate site infiltration with MRI guidance. Eleven consecutive patients suffering from chronic refractory cranio-facial pain who underwent 16 GON infiltrations were included in this prospective study. All of the procedures were performed on an outpatient basis in the research facility of our institution, with a 1.5 T scanner. The fatty space between inferior obliquus and semispinalis muscles at C1-C2 level was defined as the target. Technical success was defined as the ability to accurately inject the products at the target, assessed by post-procedure axial and sagittal proton density-weighted sequences. Clinical success was defined as a 50% pain decrease at 1 month. Technical success was 100%. GON was depicted in 6/11 cases on planning MRI sequences. Mean duration of procedure was 22.5 min (range 16-41). Clinical success was obtained in 7/11 included patients (63.6%) with a mean self-reported improvement of 78%. Interventional MR-guidance for GON infiltration is a feasible technique offering similar results to an already established effective procedure. It may appear as a useful tool in specific populations, such as young patients and repeat infiltrations, and should be considered in these settings. (orig.)

  15. Greater occipital nerve infiltration under MR guidance. Feasibility study and preliminary results

    Energy Technology Data Exchange (ETDEWEB)

    Kastler, Adrian; Perolat, Romain [Grenoble Alpes University Hospital, Neuroradiology and MRI Unit, Grenoble (France); CLINATEC Research Facility, LETI, CEA Grenoble (France); Kastler, Bruno [Paris V University, Adult Radiology Department, Necker Hospital, Paris (France); Maindet-Dominici, Caroline [Grenoble Alpes University Hospital, Pain Management Unit, Grenoble (France); Fritz, Jan [The Johns Hopkins University School of Medicine, Russell H. Morgan Department of Radiology and Radiological Science, Baltimore, MD (United States); Benabid, Alim Louis [CLINATEC Research Facility, LETI, CEA Grenoble (France); Chabardes, Stephan [CLINATEC Research Facility, LETI, CEA Grenoble (France); Grenoble Alpes University Hospital, Neurosurgery Unit, Grenoble (France); Krainik, Alexandre [Grenoble Alpes University Hospital, Neuroradiology and MRI Unit, Grenoble (France)


    To assess the feasibility of greater occipital nerve (GON) intermediate site infiltration with MRI guidance. Eleven consecutive patients suffering from chronic refractory cranio-facial pain who underwent 16 GON infiltrations were included in this prospective study. All of the procedures were performed on an outpatient basis in the research facility of our institution, with a 1.5 T scanner. The fatty space between inferior obliquus and semispinalis muscles at C1-C2 level was defined as the target. Technical success was defined as the ability to accurately inject the products at the target, assessed by post-procedure axial and sagittal proton density-weighted sequences. Clinical success was defined as a 50% pain decrease at 1 month. Technical success was 100%. GON was depicted in 6/11 cases on planning MRI sequences. Mean duration of procedure was 22.5 min (range 16-41). Clinical success was obtained in 7/11 included patients (63.6%) with a mean self-reported improvement of 78%. Interventional MR-guidance for GON infiltration is a feasible technique offering similar results to an already established effective procedure. It may appear as a useful tool in specific populations, such as young patients and repeat infiltrations, and should be considered in these settings. (orig.)

  16. Seasonal Analysis of Microbial Communities in Precipitation in the Greater Tokyo Area, Japan

    Directory of Open Access Journals (Sweden)

    Satoshi Hiraoka


    Full Text Available The presence of microbes in the atmosphere and their transport over long distances across the Earth's surface was recently shown. Precipitation is likely a major path by which aerial microbes fall to the ground surface, affecting its microbial ecosystems and introducing pathogenic microbes. Understanding microbial communities in precipitation is of multidisciplinary interest from the perspectives of microbial ecology and public health; however, community-wide and seasonal analyses have not been conducted. Here, we carried out 16S rRNA amplicon sequencing of 30 precipitation samples that were aseptically collected over 1 year in the Greater Tokyo Area, Japan. The precipitation microbial communities were dominated by Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria and were overall consistent with those previously reported in atmospheric aerosols and cloud water. Seasonal variations in composition were observed; specifically, Proteobacteria abundance significantly decreased from summer to winter. Notably, estimated ordinary habitats of precipitation microbes were dominated by animal-associated, soil-related, and marine-related environments, and reasonably consistent with estimated air mass backward trajectories. To our knowledge, this is the first amplicon-sequencing study investigating precipitation microbial communities involving sampling over the duration of a year.

  17. Electricity sequence control

    International Nuclear Information System (INIS)

    Shin, Heung Ryeol


    The contents of the book are introduction of control system, like classification and control signal, introduction of electricity power switch, such as push-button and detection switch sensor for induction type and capacitance type machinery for control, solenoid valve, expression of sequence and type of electricity circuit about using diagram, time chart, marking and term, logic circuit like Yes, No, and, or and equivalence logic, basic electricity circuit, electricity sequence control, added condition, special program control about choice and jump of program, motor control, extra circuit on repeat circuit, pause circuit in a conveyer, safety regulations and rule about classification of electricity disaster and protective device for insulation.

  18. Next-generation sequencing

    DEFF Research Database (Denmark)

    Rieneck, Klaus; Bak, Mads; Jønson, Lars


    , Illumina); several millions of PCR sequences were analyzed. RESULTS: The results demonstrated the feasibility of diagnosing the fetal KEL1 or KEL2 blood group from cell-free DNA purified from maternal plasma. CONCLUSION: This method requires only one primer pair, and the large amount of sequence...... information obtained allows well for statistical analysis of the data. This general approach can be integrated into current laboratory practice and has numerous applications. Besides DNA-based predictions of blood group phenotypes, platelet phenotypes, or sickle cell anemia, and the determination of zygosity...

  19. Greater general startle reflex is associated with greater anxiety levels: a correlational study on 111 young women

    Directory of Open Access Journals (Sweden)

    Eleonora ePoli


    Full Text Available Startle eyeblink reflex is a valid non-invasive tool for studying attention, emotion and psychiatric disorders. In the absence of any experimental manipulation, the general (or baseline startle reflex shows a high inter-individual variability, which is often considered task-irrelevant and therefore normalized across participants. Unlike the above view, we hypothesized that greater general startle magnitude is related to participants’ higher anxiety level. 111 healthy young women, after completing the State-Trait Anxiety Inventory, were randomly administered 10 acoustic white noise probes (50 ms, 100 dBA acoustic level while integrated EMG from left and right orbicularis oculi was recorded. Results showed that participants with greater state anxiety levels exhibited larger startle reflex magnitude from the left eye (r109=0.23, p<0.05. Furthermore, individuals who perceived the acoustic probe as more aversive reported the largest anxiety scores (r109=0.28, p<0.05 and had the largest eyeblinks, especially in the left eye (r109 = 0.34, p<0.001. Results suggest that general startle may represent a valid tool for studying the neural excitability underlying anxiety and emotional dysfunction in neurological and mental disorders.

  20. Economic Analysis of the Impacts of Climate-Induced Changes in River Flow on Hydropower and Fisheries in Himalayan region. (United States)

    Khadka Mishra, S.; Hayse, J.; Veselka, T.; Yan, E.; Kayastha, R. B.; McDonald, K.; Steiner, N.; Lagory, K.


    Climate-mediated changes in melting of snow and glaciers and in precipitation patterns are expected to significantly alter the water flow of rivers at various spatial and temporal scales. Hydropower generation and fisheries are likely to be impacted annually and over the century by the seasonal as well as long-term changes in hydrological conditions. In order to quantify the interactions between the drivers of climate change, the hydropower sector and the ecosystem we developed an integrated assessment framework that links climate models with process-based bio-physical and economic models. This framework was applied to estimate the impacts of changes in snow and glacier melt on the stream flow of the Trishuli River of the High Mountain Asia Region. Remotely-sensed data and derived products, as well as in-situ data, were used to quantify the changes in snow and glacier melt. The hydrological model was calibrated and validated for stream flows at various points in the Trishuli river in order to forecast conditions at the location of a stream gauge station upstream of the Trishuli hydropower plant. The flow of Trishuli River was projected to increase in spring and decrease in summer over the period of 2020-2100 under RCP 8.5 and RCP 4.5 scenarios as compared to respective mean seasonal discharge observed over 1981-2014. The simulated future annual mean stream flow would increase by 0.6 m3/s under RCP 8.5 scenario but slightly decrease under RCP 4.5. The Argonne Hydropower Energy and Economic toolkit was used to estimate and forecast electricity generation at the Trishuli power plant under various flow conditions and upgraded infrastructure. The increased spring flow is expected to increase dry-season electricity generation by 18% under RCP 8.5 in comparison to RCP 4.5. A fishery suitability model developed for the basin indicated that fishery suitability in the Trishuli River would be greater than 70% of optimal, even during dry months under both RCP 4.5 and RCP 8

  1. Conceptual Structures of Copulas and Locative-Existential Verbs in Tibetan and Himalayan Languages%藏语与喜马拉雅语言中存在类动词的概念结构

    Institute of Scientific and Technical Information of China (English)



    文章从认知语言学、语言人类学和认知心理学的角度讨论藏语的系词(yin 与 red)“是”和处所/存在动词(yod、dug、“在、有”的功能分布,并且与喜马拉雅语言的存在类动词进行了比较。通过亲属语言之间跨语言的比较,了解存在类动词之间概念的关联性。探索存在类动词在这些语言中概念结构的相似性和差异性。%In this paper,we describe and analyze functional distribution of copulas yin,red and locative-existential verbs yod,dug, in varieties of Tibetan,in the meantime,we compare Tibetan copulas and locative-existential verbs with those of Himalayan languages.We finally provide similarities and differences of conceptual structures of copulas and locative-existential verbs between Tibetan and Himalayan languages in terms of cognitive linguistics,linguistic anthropology and cogni-tive psychology.

  2. Greater Cortical Thickness in Elderly Female Yoga Practitioners—A Cross-Sectional Study

    Directory of Open Access Journals (Sweden)

    Rui F. Afonso


    Full Text Available Yoga, a mind-body activity that requires attentional engagement, has been associated with positive changes in brain structure and function, especially in areas related to awareness, attention, executive functions and memory. Normal aging, on the other hand, has also been associated with structural and functional brain changes, but these generally involve decreased cognitive functions. The aim of this cross-sectional study was to compare brain cortical thickness (CT in elderly yoga practitioners and a group of age-matched healthy non-practitioners. We tested 21 older women who had practiced hatha yoga for at least 8 years and 21 women naive to yoga, meditation or any mind-body interventions who were matched to the first group in age, years of formal education and physical activity level. A T1-weighted MPRAGE sequence was acquired for each participant. Yoga practitioners showed significantly greater CT in a left prefrontal lobe cluster, which included portions of the lateral middle frontal gyrus, anterior superior frontal gyrus and dorsal superior frontal gyrus. We found greater CT in the left prefrontal cortex of healthy elderly women who trained yoga for a minimum of 8 years compared with women in the control group.

  3. Automatic analysis of the 2015 Gorkha earthquake aftershock sequence. (United States)

    Baillard, C.; Lyon-Caen, H.; Bollinger, L.; Rietbrock, A.; Letort, J.; Adhikari, L. B.


    The Mw 7.8 Gorkha earthquake, that partially ruptured the Main Himalayan Thrust North of Kathmandu on the 25th April 2015, was the largest and most catastrophic earthquake striking Nepal since the great M8.4 1934 earthquake. This mainshock was followed by multiple aftershocks, among them, two notable events that occurred on the 12th May with magnitudes of 7.3 Mw and 6.3 Mw. Due to these recent events it became essential for the authorities and for the scientific community to better evaluate the seismic risk in the region through a detailed analysis of the earthquake catalog, amongst others, the spatio-temporal distribution of the Gorkha aftershock sequence. Here we complement this first study by doing a microseismic study using seismic data coming from the eastern part of the Nepalese Seismological Center network associated to one broadband station in Everest. Our primary goal is to deliver an accurate catalog of the aftershock sequence. Due to the exceptional number of events detected we performed an automatic picking/locating procedure which can be splitted in 4 steps: 1) Coarse picking of the onsets using a classical STA/LTA picker, 2) phase association of picked onsets to detect and declare seismic events, 3) Kurtosis pick refinement around theoretical arrival times to increase picking and location accuracy and, 4) local magnitude calculation based amplitude of waveforms. This procedure is time efficient ( 1 sec/event), reduces considerably the location uncertainties ( 2 to 5 km errors) and increases the number of events detected compared to manual processing. Indeed, the automatic detection rate is 10 times higher than the manual detection rate. By comparing to the USGS catalog we were able to give a new attenuation law to compute local magnitudes in the region. A detailed analysis of the seismicity shows a clear migration toward the east of the region and a sudden decrease of seismicity 100 km east of Kathmandu which may reveal the presence of a tectonic

  4. New paleomagnetic results from the Paleocene redbeds in the Tethyan Himalaya: Insights into the precollisional extension of Greater India and the time of the India-Asia collision (United States)

    Yang, T.; Jin, J.; Ma, Y.; Bian, W.; Zhang, S.; Gao, F.; Wu, H.; Li, H.; Yang, Z.; Cao, L.


    The collision and ongoing convergence between the India and Asia continents have produced the Himalayan-Tibetan Orogen. The precollisional extension of Greater India and the time of the India-Asia collision are very important to understand the tectonic evolution of the Tibetan Plateau, but disputes still remain concerning these two problems. A paleomagnetic and rock-magnetic study has been carried out on the Sangdanlin and Zheya Formation redbeds, which were dated at 60-58.5 Ma, in the Saga area of the Tethyan Himalaya. Thirty-six Paleocene redbed sites provide a tilt-corrected site-mean direction of D=178.3°, I=9.8° with ɑ95=5.5°, corresponding to a paleopole at 55.6°N, 268.5°E with A95 = 4.9°. This Paleocene paleomagnetic dataset passes positive fold tests and shows that the Saga area (29.3°N, 85.3°E) was located at 5.1°S during 60-58.5 Ma. Comparing the Paleocene (60-58.5 Ma) paleomagnetic results observed from the Tethyan Himalaya with those expected from the Indian APWP indicates a paleolatitude difference of 2.1°, which, combined with that the Early Cretaceous paleomagnetic results obtained from the Tethyan Himalaya and the Indian craton also showed a similar paleolatitude difference, suggests that neither a great north-south crustal shortening occurred between the Indian craton and the Tethyan Himalaya after the India-Asia collision, nor that a wide ocean extended between them after the Early Cretaceous. Therefore, high-quality paleomagnetic results show no a big Greater India. Based on our new Paleocene results obtained from the Tethyan Himalaya and the reliable Cretaceous-Early Eocene paleomagnetic results observed from the Lhasa terrane, as well as on extrapolating a constant Indian northward velocity of 18.8 cm/yr, the India-Asia collision occurred at 49.2 Ma for the reference point at 29.3°N, 85.3°E. This work was supported by the National Natural Science Foundation of China (41572205) and the Fundamental Research Fund for the Central

  5. Biological sequence analysis

    DEFF Research Database (Denmark)

    Durbin, Richard; Eddy, Sean; Krogh, Anders Stærmose

    This book provides an up-to-date and tutorial-level overview of sequence analysis methods, with particular emphasis on probabilistic modelling. Discussed methods include pairwise alignment, hidden Markov models, multiple alignment, profile searches, RNA secondary structure analysis, and phylogene...


    International Nuclear Information System (INIS)



    The Relativistic Heavy Ion Collider (RHIC) has a high level asynchronous time-line driven by a controlling program called the ''Sequencer''. Most high-level magnet and beam related issues are orchestrated by this system. The system also plays an important task in coordinated data acquisition and saving. We present the program, operator interface, operational impact and experience

  7. Twin anemia polycythemia sequence

    NARCIS (Netherlands)

    Slaghekke, Femke


    In this thesis we describe that Twin Anemia Polycythemia Sequence (TAPS) is a form of chronic feto-fetal transfusion in monochorionic (identical) twins based on a small amount of blood transfusion through very small anastomoses. For the antenatal diagnosis of TAPS, Middle Cerebral Artery – Peak

  8. simple sequence repeat (SSR)

    African Journals Online (AJOL)

    In the present study, 78 mapped simple sequence repeat (SSR) markers representing 11 linkage groups of adzuki bean were evaluated for transferability to mungbean and related Vigna spp. 41 markers amplified characteristic bands in at least one Vigna species. The transferability percentage across the genotypes ranged ...

  9. Pre-monsoon air quality over Lumbini, a world heritage site along the Himalayan foothills

    Directory of Open Access Journals (Sweden)

    D. Rupakheti


    regional forest fires combined with meteorological conditions conducive of pollution transport to Lumbini. Fossil fuel combustion also contributed significantly, accounting for more than half of the ambient BC concentration according to aerosol spectral light absorption coefficients obtained in Lumbini. WRF-STEM, a regional chemical transport model, was used to simulate the meteorology and the concentrations of pollutants to understand the pollutant transport pathways. The model estimated values were ∼ 1. 5 to 5 times lower than the observed concentrations for CO and PM10, respectively. Model-simulated regionally tagged CO tracers showed that the majority of CO came from the upwind region of Ganges Valley. Model performance needs significant improvement in simulating aerosols in the region. Given the high air pollution level, there is a clear and urgent need for setting up a network of long-term air quality monitoring stations in the greater Lumbini region.

  10. The Active Structure of the Greater Dead Sea Basin (United States)

    Shamir, G.


    The Greater Dead Sea Basin (GDSB) is a 220km long depression situated along the southern section of the Dead Sea Transform (DST), between two structurally and gravitationally elevated points, Wadi Malih in the north and Paran fault zone in the south. In its center is the Dead Sea basin 'sensu strictu' (DSB), which has been described since the 1970s as a pull-apart basin at a left step-over along the DST. However, several observations, or their lack thereof, contradict this scheme, e.g. (i) It is not supported by recent seismological and geomorphic data; (ii) It does not explain the fault pattern and mixed sinistral and dextral offset along the DSB western boundary; (iii) It does not simply explain the presence of intense deformation outside the presumed fault step zone; (iv) It is inconsistent with the orientation of seismically active faults within the Dead Sea and Jericho Valley; (v) The length of the DSB exceeds the total offset along the Dead Sea Transform, while its subsidence is about the age of the DST. In this study, newly acquired and analyzed data (high resolution seismic reflection and earthquake relocation and fault plane solutions) has been integrated with previously published data (structural mapping, fracture orientation distribution, Bouguer anomaly maps, sinkhole distribution, geomorphic lineaments). The results show that the GDSB is dominated by two active fault systems, one trending NNE and showing normal-dextral motion, the other trending NW. These systems are identified by earthquake activity, seismic reflection observations, alignment of recent sinkholes, and distribution of Bouguer anomaly gradients. As a result, the intra-basin structure is of a series of rectangular blocks. The dextral slip component along NNE trending faults, the mixed sense of lateral offset along the western boundary of the DSB and temporal change in fracture orientation in the Jericho Valley suggest that the intra-basin blocks have rotated counterclockwise since the

  11. A new probabilistic seismic hazard assessment for greater Tokyo (United States)

    Stein, R.S.; Toda, S.; Parsons, T.; Grunewald, E.; Blong, R.; Sparks, S.; Shah, H.; Kennedy, J.


    Tokyo and its outlying cities are home to one-quarter of Japan's 127 million people. Highly destructive earthquakes struck the capital in 1703, 1855 and 1923, the last of which took 105 000 lives. Fuelled by greater Tokyo's rich seismological record, but challenged by its magnificent complexity, our joint Japanese-US group carried out a new study of the capital's earthquake hazards. We used the prehistoric record of great earthquakes preserved by uplifted marine terraces and tsunami deposits (17 M???8 shocks in the past 7000 years), a newly digitized dataset of historical shaking (10 000 observations in the past 400 years), the dense modern seismic network (300 000 earthquakes in the past 30 years), and Japan's GeoNet array (150 GPS vectors in the past 10 years) to reinterpret the tectonic structure, identify active faults and their slip rates and estimate their earthquake frequency. We propose that a dislodged fragment of the Pacific plate is jammed between the Pacific, Philippine Sea and Eurasian plates beneath the Kanto plain on which Tokyo sits. We suggest that the Kanto fragment controls much of Tokyo's seismic behaviour for large earthquakes, including the damaging 1855 M???7.3 Ansei-Edo shock. On the basis of the frequency of earthquakes beneath greater Tokyo, events with magnitude and location similar to the M??? 7.3 Ansei-Edo event have a ca 20% likelihood in an average 30 year period. In contrast, our renewal (time-dependent) probability for the great M??? 7.9 plate boundary shocks such as struck in 1923 and 1703 is 0.5% for the next 30 years, with a time-averaged 30 year probability of ca 10%. The resulting net likelihood for severe shaking (ca 0.9g peak ground acceleration (PGA)) in Tokyo, Kawasaki and Yokohama for the next 30 years is ca 30%. The long historical record in Kanto also affords a rare opportunity to calculate the probability of shaking in an alternative manner exclusively from intensity observations. This approach permits robust estimates

  12. Coat protein sequence shows that Cucumber mosaic virus isolate

    Indian Academy of Sciences (India)

    A viral disease was identified on geraniums (Pelargonium spp.) grown in a greenhouse at the Institute of Himalayan Bioresource Technology (IHBT), Palampur, exhibiting mild mottling and stunting. The causal virus (Cucumber mosaic virus, CMV) was identified and characterized on the basis of host range, aphid ...

  13. Coat protein sequence shows that Cucumber mosaic virus isolate ...

    Indian Academy of Sciences (India)


    crop is reported to be infecetd by a number of pests and dis- eases (Rao et al 2000) including a ... Plant Virus Lab, Floriculture Division, Institute of Himalayan Bioresource Technology, Palampur 176 061, India. *Corresponding author (Fax ..... ELISA test used in testing the plants (either mechanical- ly inoculated or naturally ...

  14. Targeted sequencing of plant genomes (United States)

    Mark D. Huynh


    Next-generation sequencing (NGS) has revolutionized the field of genetics by providing a means for fast and relatively affordable sequencing. With the advancement of NGS, wholegenome sequencing (WGS) has become more commonplace. However, sequencing an entire genome is still not cost effective or even beneficial in all cases. In studies that do not require a whole-...

  15. Almost convergence of triple sequences


    Ayhan Esi; M.Necdet Catalbas


    In this paper we introduce and study the concepts of almost convergence and almost Cauchy for triple sequences. Weshow that the set of almost convergent triple sequences of 0's and 1's is of the first category and also almost everytriple sequence of 0's and 1's is not almost convergent.Keywords: almost convergence, P-convergent, triple sequence.

  16. A few Smarandache Integer Sequences


    Ibstedt, Henry


    This paper deals with the analysis of a few Smarandache Integer Sequences which first appeared in Properties or the Numbers, F. Smarandache, University or Craiova Archives, 1975. The first four sequences are recurrence generated sequences while the last three are concatenation sequences.

  17. Scaling and allometry in the building geometries of Greater London (United States)

    Batty, M.; Carvalho, R.; Hudson-Smith, A.; Milton, R.; Smith, D.; Steadman, P.


    Many aggregate distributions of urban activities such as city sizes reveal scaling but hardly any work exists on the properties of spatial distributions within individual cities, notwithstanding considerable knowledge about their fractal structure. We redress this here by examining scaling relationships in a world city using data on the geometric properties of individual buildings. We first summarise how power laws can be used to approximate the size distributions of buildings, in analogy to city-size distributions which have been widely studied as rank-size and lognormal distributions following Zipf [ Human Behavior and the Principle of Least Effort (Addison-Wesley, Cambridge, 1949)] and Gibrat [ Les Inégalités Économiques (Librarie du Recueil Sirey, Paris, 1931)]. We then extend this analysis to allometric relationships between buildings in terms of their different geometric size properties. We present some preliminary analysis of building heights from the Emporis database which suggests very strong scaling in world cities. The data base for Greater London is then introduced from which we extract 3.6 million buildings whose scaling properties we explore. We examine key allometric relationships between these different properties illustrating how building shape changes according to size, and we extend this analysis to the classification of buildings according to land use types. We conclude with an analysis of two-point correlation functions of building geometries which supports our non-spatial analysis of scaling.

  18. Comparing statistical tests for detecting soil contamination greater than background

    International Nuclear Information System (INIS)

    Hardin, J.W.; Gilbert, R.O.


    The Washington State Department of Ecology (WSDE) recently issued a report that provides guidance on statistical issues regarding investigation and cleanup of soil and groundwater contamination under the Model Toxics Control Act Cleanup Regulation. Included in the report are procedures for determining a background-based cleanup standard and for conducting a 3-step statistical test procedure to decide if a site is contaminated greater than the background standard. The guidance specifies that the State test should only be used if the background and site data are lognormally distributed. The guidance in WSDE allows for using alternative tests on a site-specific basis if prior approval is obtained from WSDE. This report presents the results of a Monte Carlo computer simulation study conducted to evaluate the performance of the State test and several alternative tests for various contamination scenarios (background and site data distributions). The primary test performance criteria are (1) the probability the test will indicate that a contaminated site is indeed contaminated, and (2) the probability that the test will indicate an uncontaminated site is contaminated. The simulation study was conducted assuming the background concentrations were from lognormal or Weibull distributions. The site data were drawn from distributions selected to represent various contamination scenarios. The statistical tests studied are the State test, t test, Satterthwaite's t test, five distribution-free tests, and several tandem tests (wherein two or more tests are conducted using the same data set)

  19. Distribution of grizzly bears in the Greater Yellowstone Ecosystem, 2004 (United States)

    Schwartz, C.C.; Haroldson, M.A.; Gunther, K.; Moody, D.


    The US Fish and Wildlife Service (USFWS) proposed delisting the Yellowstone grizzly bear (Ursus arctos horribilis) in November 2005. Part of that process required knowledge of the most current distribution of the species. Here, we update an earlier estimate of occupied range (1990–2000) with data through 2004. We used kernel estimators to develop distribution maps of occupied habitats based on initial sightings of unduplicated females (n = 481) with cubs of the year, locations of radiomarked bears (n = 170), and spatially unique locations of conflicts, confrontations, and mortalities (n = 1,075). Although each data set was constrained by potential sampling bias, together they provided insight into areas in the Greater Yellowstone Ecosystem (GYE) currently occupied by grizzly bears. The current distribution of 37,258 km2 (1990–2004) extends beyond the distribution map generated with data from 1990–2000 (34,416 km2 ). Range expansion is particularly evident in parts of the Caribou–Targhee National Forest in Idaho and north of Spanish Peaks on the Gallatin National Forest in Montana.

  20. Greater utilization of wood residue fuels through improved financial planning

    International Nuclear Information System (INIS)

    Billings, C.D.; Ziemke, M.C.; Stanford, R.


    Recent events have focused attention on the promotion of greater utilization of biomass fuel. Considerations include the need to reduce increases in global warming and also to improve ground level air quality by limiting the use of fossil fuels. However, despite all these important environmentally related considerations, economics remains the most important factor in the decision process used to determine the feasibility of using available renewable fuels instead of more convenient fossil fuels. In many areas of the Southeast, this decision process involves choosing between wood residue fuels such as bark, sawdust and shavings and presently plentiful natural gas. The primary candidate users of wood residue fuels are industries that use large amounts of heat and electric power and are located near centers of activity in the forest products industry such as sawmills, veneer mills and furniture factories. Given that such facilities both produce wood residues and need large amounts of heat and electricity, it is understandable that these firms are often major users of wood-fired furnaces and boilers. The authors have observed that poor or incomplete financial planning by the subject firms is a major barrier to economic utilization of inexpensive and widely available renewable fuels. In this paper, the authors suggest that wider usage of improved financial planning could double the present modest annual incidence of new commercial wood-fueled installation

  1. Blood transfusion sampling and a greater role for error recovery. (United States)

    Oldham, Jane

    Patient identification errors in pre-transfusion blood sampling ('wrong blood in tube') are a persistent area of risk. These errors can potentially result in life-threatening complications. Current measures to address root causes of incidents and near misses have not resolved this problem and there is a need to look afresh at this issue. PROJECT PURPOSE: This narrative review of the literature is part of a wider system-improvement project designed to explore and seek a better understanding of the factors that contribute to transfusion sampling error as a prerequisite to examining current and potential approaches to error reduction. A broad search of the literature was undertaken to identify themes relating to this phenomenon. KEY DISCOVERIES: Two key themes emerged from the literature. Firstly, despite multi-faceted causes of error, the consistent element is the ever-present potential for human error. Secondly, current focus on error prevention could potentially be augmented with greater attention to error recovery. Exploring ways in which clinical staff taking samples might learn how to better identify their own errors is proposed to add to current safety initiatives.

  2. Greater commitment to the domestic violence training is required. (United States)

    Leppäkoski, Tuija Helena; Flinck, Aune; Paavilainen, Eija


    Domestic violence (DV) is a major public health problem with high health and social costs. A solution to this multi-faceted problem requires that various help providers work together in an effective and optimal manner when dealing with different parties of DV. The objective of our research and development project (2008-2013) was to improve the preparedness of the social and healthcare professionals to manage DV. This article focuses on the evaluation of interprofessional education (IPE) to provide knowledge and skills for identifying and intervening in DV and to improve collaboration among social and health care professionals and other help providers at the local and regional level. The evaluation data were carried out with an internal evaluation. The evaluation data were collected from the participants orally and in the written form. The participants were satisfied with the content of the IPE programme itself and the teaching methods used. Participation in the training sessions could have been more active. Moreover, some of the people who had enrolled for the trainings could not attend all of them. IPE is a valuable way to develop intervening in DV. However, greater commitment to the training is required from not only the participants and their superiors but also from trustees.

  3. Greater confinement disposal program at the Savannah River Plant

    International Nuclear Information System (INIS)

    Towler, O.A.; Cook, J.R.; Peterson, D.L.; Reddick, J.A.


    A facility to demonstrate Greater Confinement Disposal (GCD) of low-level solid radioactive waste in a humid environment has been built and is operating at the Savannah River Plant (SRP). GCD practices of waste segregation into high and low activity concentrations, emplacement of waste below the root zone, waste stabilization, and capping are being used in the demonstration. Activity concentrations to select wastes for GCD are based on the volume/activity distribution of low-level solid wastes as obtained from SRP burial records, and are equal to or less than those for Class B waste in 10 CFR 61. The first disposal units constructed are twenty 9-ft-diam, 30-ft-deep boreholes. These holes will be used to dispose of wastes from the production reactors, tritiated wastes, and selected wastes from offsite. In 1984, construction will begin on an engineered GCD trench for disposal of boxed waste and large bulky items that meet the activity concentration criteria. 4 references, 5 figures, 2 tables

  4. Greater future global warming inferred from Earth's recent energy budget. (United States)

    Brown, Patrick T; Caldeira, Ken


    Climate models provide the principal means of projecting global warming over the remainder of the twenty-first century but modelled estimates of warming vary by a factor of approximately two even under the same radiative forcing scenarios. Across-model relationships between currently observable attributes of the climate system and the simulated magnitude of future warming have the potential to inform projections. Here we show that robust across-model relationships exist between the global spatial patterns of several fundamental attributes of Earth's top-of-atmosphere energy budget and the magnitude of projected global warming. When we constrain the model projections with observations, we obtain greater means and narrower ranges of future global warming across the major radiative forcing scenarios, in general. In particular, we find that the observationally informed warming projection for the end of the twenty-first century for the steepest radiative forcing scenario is about 15 per cent warmer (+0.5 degrees Celsius) with a reduction of about a third in the two-standard-deviation spread (-1.2 degrees Celsius) relative to the raw model projections reported by the Intergovernmental Panel on Climate Change. Our results suggest that achieving any given global temperature stabilization target will require steeper greenhouse gas emissions reductions than previously calculated.

  5. [Reproductive health survey of young adults in greater Santiago]. (United States)

    Valenzuela, M S; Herold, J M; Morris, L; López, I M


    In 1988 a survey was carried out in order to obtain information on knowledge about reproduction, sexual activity, attitudes, and use of contraceptive methods among residents between 15 and 24 years of age in Greater Santiago. For this purpose, a multistage, self-weighted, non-replacement probability sample was chosen from the entire Santiago urban area. After 2,898 households were visited, 865 women and 800 men were selected and interviewed. For the interview, a questionnaire with 156 questions was developed; many questions were similar to those included in similar surveys in Brazil and Guatemala. The interviewers were professionals who had received prior training. Although 75% of the interviewees had attended sex education classes, they had erroneous ideas on various basic subjects. Sixty-nine percent of the women interviewed had undergone menarche before attending these classes. In addition, 35.4% of the women and 65.0% of the men had had sexual relations prior to marriage, and less than 20% had used any contraceptive method. More than 60% of the interviewees who had children had conceived them before marrying. These findings point up the necessity of offering sex education classes for children and young people, as well as facilitating their access to family planning services, in order to decrease the number of illegitimate and unwanted children that are born in Chile.

  6. Interculturalism and Physical Cultural Diversity in the Greater Toronto Area

    Directory of Open Access Journals (Sweden)

    Yuka Nakamura


    Full Text Available The Greater Toronto Area (GTA is one of the most multicultural communities in the world. Frequently, this description is based on ethnic, linguistic, and culinary diversity. Physical cultural diversity, such as different sports, martial arts, forms of dance, exercise systems, and other physical games and activities, remains ignored and understudied. Based on a living database of the GTA’s physical cultural diversity, this study identifies the trajectories of the lifecycle of activities that have been introduced into the GTA’s physical culture by immigrants. These pathways differ based on whether the activity is offered in a separate setting, where individuals may be participating with other immigrants of the same ethnocultural group, or mixed settings, where people are participating with people from outside of their ethnocultural group. We argue that the diversity and the lifecycle trajectories of physical cultural forms in the GTA serve as evidence of interculturalism and the contribution by immigrants to the social and cultural life of Canada.

  7. Neural markers of a greater female responsiveness to social stimuli

    Directory of Open Access Journals (Sweden)

    Zani Alberto


    Full Text Available Abstract Background There is fMRI evidence that women are neurally predisposed to process infant laughter and crying. Other findings show that women might be more empathic and sensitive than men to emotional facial expressions. However, no gender difference in the brain responses to persons and unanimated scenes has hitherto been demonstrated. Results Twenty-four men and women viewed 220 images portraying persons or landscapes and ERPs were recorded from 128 sites. In women, but not in men, the N2 component (210–270 was much larger to persons than to scenes. swLORETA showed significant bilateral activation of FG (BA19/37 in both genders when viewing persons as opposed to scenes. Only women showed a source of activity in the STG and in the right MOG (extra-striate body area, EBA, and only men in the left parahippocampal area (PPA. Conclusion A significant gender difference was found in activation of the left and right STG (BA22 and the cingulate cortex for the subtractive condition women minus men, thus indicating that women might have a greater preference or interest for social stimuli (faces and persons.

  8. Vapour cloud explosion hazard greater with light feedstocks

    Energy Technology Data Exchange (ETDEWEB)

    Windebank, C.S.


    Because lighter chemical feedstocks such as propylene and butylenes are more reactive than LPG's they pose a greater risk of vapor cloud explosion, particularly during their transport. According to C.S. Windebank (Insurance Tech. Bur.), percussive unconfined vapor cloud explosions (PUVCE's) do not usually occur below the ten-ton threshold for saturated hydrocarbons but can occur well below this threshold in the case of unsaturated hydrocarbons such as propylene and butylenes. Boiling liquid expanding vapor explosions (BLEVE's) are more likely to be ''hot'' (i.e., the original explosion is associated with fire) than ''cold'' in the case of unsaturated hydrocarbons. No PUVCE or BLEVE incident has been reported in the UK. In the US, 16 out of 20 incidents recorded between 1970 and 1975 were related to chemical feedstocks, including propylene and butylenes, and only 4 were LPG-related. The average losses were $20 million per explosion. Between 1968 and 1978, 8% of LPG pipeline spillages led to explosions.

  9. Status on disposal of greater-than-Class C

    Energy Technology Data Exchange (ETDEWEB)

    Plummer, T.L.


    The Department of Energy (DOE) has developed a plan for the management and disposal of commercially generated greater-than-Class C (GTCC) low-level radioactive waste. The Low-Level Radioactive Waste Policy Amendments Act of 1985 made DOE responsible for disposal of GTCC waste. The act requires that GTCC waste be disposed in a Nuclear Regulatory Commission (NRC)-licensed facility. The NRC has amended 10 CFR 61 to express a preference for geologic disposal of GTCC waste. Based on reassessment studies, legislative guidance, and stakeholder involvement, a revised plan has been formulated to provide for total management of GTCC waste. The plan has four major thrusts: (1) plan for GTCC waste storage at the generator site until disposal is available, (2) establish storage for GTCC sealed sources posing health and safety risk to the public, (3) facilitate storage for other GTCC waste posing health and safety risk to the public, and (4) plan for co-disposal of GTCC waste in a geologic disposal site with similar waste types. The revised plan focuses on applying available resources to near- and long-term needs.

  10. Spontaneous, generalized lipidosis in captive greater horseshoe bats (Rhinolophus ferrumequinum). (United States)

    Gozalo, Alfonso S; Schwiebert, Rebecca S; Metzner, Walter; Lawson, Gregory W


    During a routine 6-month quarantine period, 3 of 34 greater horseshoe bats (Rhinolophus ferrumequinum) captured in mainland China and transported to the United States for use in echolocation studies were found dead with no prior history of illness. All animals were in good body condition at the time of death. At necropsy, a large amount of white fat was found within the subcutis, especially in the sacrolumbar region. The liver, kidneys, and heart were diffusely tan in color. Microscopic examination revealed that hepatocytes throughout the liver were filled with lipid, and in some areas, lipid granulomas were present. renal lesions included moderate amounts of lipid in the cortical tubular epithelium and large amounts of protein and lipid within Bowman's capsules in the glomeruli. In addition, one bat had large lipid vacuoles diffusely distributed throughout the myocardium. The exact pathologic mechanism inducing the hepatic, renal, and cardiac lipidosis is unknown. The horseshoe bats were captured during hibernation and immediately transported to the United States. It is possible that the large amount of fat stored coupled with changes in photoperiod, lack of exercise, and/or the stress of captivity might have contributed to altering the normal metabolic processes, leading to anorexia and consequently lipidosis in these animals.

  11. Greater Vancouver's water supply receives ozone treatment

    Energy Technology Data Exchange (ETDEWEB)

    Crosby, J.; Singh, I.; Reil, D. D.; Neden, G.


    To improve the overall quality of the treated water delivered to the member municipalities of the Greater Vancouver Water District (GVWD), the GVWD implemented a phased drinking water quality improvement program. The phased treatment program is directed at attaining effective disinfection while minimizing the formation of chlorinated disinfection by-products. Accordingly, the current primary disinfection method of chlorination was reevaluated and an ozone primary disinfection without filtration was authorized. Ozonization provides increased protection against Giardia and Cryptosporidium and a decrease in the formation potential for disinfection by-products (DPBs). This paper describes the design for the ozonation facility at Coquitlam, construction of which began in 1998 and completed during the summer of 2000. The facility houses the liquid oxygen supply, ozone generation, cooling water, ozone injection, primary off-gas ozone destruct system, and provides a home for various office, electrical maintenance and diesel generating functions. The second site at Capilano is expected to start construction in the fall of 2000 and be completed late in 2002. Wit its kilometre long stainless steel ozone contactor and sidestream injector tower, the Coquitlam Ozonation Facility is the first ozone pressure injection system of its kind in North America. 1 tab., 2 figs.

  12. High-pressure anatectic paragneisses from the Namche Barwa, Eastern Himalayan Syntaxis: Textural evidence for partial melting, phase equilibria modeling and tectonic implications (United States)

    Guilmette, C.; Indares, A.; Hébert, R.


    Rare kyanite-bearing anatectic paragneisses are found as boudins within sillimanite-bearing paragneisses of the core of the Namche Barwa Antiform, Tibet. In the present study, we document an occurrence from the NW side of the Yarlung Zangbo River. These rocks mainly consist of the assemblage garnet + K-feldspar + kyanite ± biotite + quartz + rutile ± plagioclase with kyanite locally pseudomorphed by sillimanite. The documented textures are consistent with the rocks having undergone biotite-dehydration melting in the kyanite stability field, under high-P granulite facies conditions, and having experienced melt extraction. However textures related to melt crystallization are ubiquitous both in polymineralic inclusions in garnet and in the matrix, suggesting that a melt fraction had remained in these rocks. Phase equilibria modelling was undertaken in the NCKFMASTHO system with THERMOCALC. P-T pseudosections built with the bulk compositions of one aluminous and one sub-aluminous paragneiss samples predict a biotite-kyanite-garnet-quartz-plagioclase-K-feldspar-liquid-rutile ± ilmenite field, in which biotite-dehydration melting occurs, located in the P-T range of ~ 800-875 °C and ~ 10-17 kbar. In addition, the topologies of these pseudosections are consistent with substantial melt loss during prograde metamorphism. A second set of P-T pseudosections with melt-reintegrated model bulk compositions were thus constructed to evaluate the effect of melt loss. The integration of textural information, precise mineral modes, mineral chemistry, and phase equilibria modelling allowed to constrain a P-T path where the rocks are buried to lower crustal depths at peak P-T conditions higher than 14 kbar and 825 °C, possibly in the order of 15-16 kbar and 850 °C, followed by decompression and cooling to P-T conditions of around 9 kbar and 810 °C, under which the remaining melt was solidified. The implications for granite production at the NBA and for Himalayan tectonic models

  13. Time-scales of erosion and weathering processes in the Himalayan river system: Element and isotope approach using the U-series

    International Nuclear Information System (INIS)

    Granet, M.


    The time-scales of erosion and weathering processes are key parameters which need to be determined to understand the response of the reliefs to external forcing like tectonics, climate and human activities. They were recovered by using U-series nuclides analyzed in sediments and suspended materials carried by the Himalayan rivers of the Ganges and Brahmaputra basins. In the Ganges basin, the time-scales of weathering determined from the study of coarse sediments carried by the Kali Gandaki range from several ky, where the uplift is located, to 350 ky. Such values indicate that the bed-rocks are in situ weathered for a long period before the weathering residual products get transported in the rivers as coarse sediments. At the outlet of the high range, these sediments are carried by the tributaries of the Ganges, the Gandak and Ghaghara, during a transfer period of about 100 ka. The study of the sediments at the outlet of the Brahmaputra tributaries allows to propose time-scales of weathering ranging from 110 to 270 ky. Such long periods confirm that during their transfer in the plains, the sediments are temporarily trapped at several places in the basins. In the Ganges and Brahmaputra rivers, the time-scales of sedimentary transfer are 575 and 160 ky, respectively. These values, which are of the same order as their response times, are much longer than the timescales of the Quaternary climate oscillations. It confirms the buffering action of the asiatic alluvial plains for the high-frequency sediment flux variations in response to external forcing in the chain. The study of suspended materials suggests that their chemical compositions result from the mixing of coarse river sediments with fine particles from various locations in the basin which are affected by vegetation recycling. By contrast to coarse sediments, the time-scales of transfer for the suspended materials are fast, e.g. a few ky, pointing the potential of U-series nuclides to assess particle transport

  14. Secondary Inorganic Aerosols over an Urban Location in North-Western Himalayan Region: Seasonal Variation in Composition and Formation Process(es) (United States)

    Kaushal, D.; Tandon, A.


    Oxidative photo-chemical transformation of precursor gases, mainly of anthropogenic origin, produces secondary aerosols. Secondary inorganic aerosols constitute a significant fraction of total aerosol load over urban locations especially high altitude in wet-temperate climatic set-up. Towns situated in North-Western Himalayan region (NWHR) with sizable population and attractive tourist destinations have been facing ever increasing problem of gaseous and particulate air pollution from exponential increase in vehicular traffic and other anthropogenic emissions. The present study has been planned to investigate the seasonal variations in atmospheric processes responsible for the formation of Secondary Inorganic Aerosols (SIA) and to estimate contribution of SIA to PM­10 load over an Urban location, Dharamshala, in Dhauladhar region of NWHR. Twenty four hourly PM10 aerosol samples were collected, on quartz micro fibre filters in Dharamshala (1350 amsl) on weekly basis for complete one year time-period (February 2015 - January 2016). These samples were analyzed for Water Soluble Inorganic Ions (WSII) using Ion-Chromatographic System. On annual basis, SO42- ions contributed maximum (52%) followed by NO3- (13%) and NH4+ (12%) to WSII. Based upon Principal Component Analysis (PCA), dominant sources contributing to PM10 associated WSII were identified as: Fossil-Fuel and Bio-mass burning, Vehicular (mainly diesel) emissions and gaseous emissions from the microbial degradation of dead bio-mass. Throughout the year, significantly high proportion of SO42- and considerable thermodynamic stability of (NH4)2SO2 at ambient temperatures, made it the major contributor to SIA over NH4NO3 and NH4Cl. On seasonal basis, maximum contribution of SIA to PM10 was observed in monsoon followed by the winter season. Low ambient temperature in winter season favoured formation of NH4NO3 with significant contribution to SIA. It could be concluded that observed variability in the composition and

  15. Variability in the growth and nodulation of soybean in response to elevation and soil properties in the himalayan region of kashmir-pakistan

    International Nuclear Information System (INIS)

    Rahim, N.; Abbasi, M.K.


    This study was conducted to examine the variability of soybean nodulation and growth in relation to elevation and soil properties across the slopping uplands of the Himalayan region of Rawalakot Azad Jammu and Kashmir (AJK), Pakistan in order to find efficient native N2 fixing bacteria adapted to local soil and climatic characteristics. Soils from twenty two different sites with variable altitude were collected and analyzed for different physico-chemical characteristics including the quantitative estimation of rhizobium population through most probable number (MPN) technique. Soybean cultivar William-82 was grown in these soils under greenhouse condition for determining the nodulation potential (number and mass) and plant growth characteristics. Morphology of the nodules were observed through optical and transmission electron microscopy. Principal component analysis (PCA) and Biplot graph were used to jointly interpret the relationship between variables and soils (treatments). Soil altitude ranged from 855 m to 3000 m while organic matter content varied between 0.8% to 3.5% and pH from 6.0 to 8.1. The indigenous rhizobia population varied between 5.0 x104 to 8.0 x106 CFU g-1 showing the existence of a substantial rhizobial population in these soils. The number of nodules per plant varied from 7 to 40 (CV 38%) suggesting site/location as an important factor contributing towards rhizobia population and impacting root nodulation. The electron microscopy of green plant nodules showed densely populated bacteria in these cells and nodule tissue cells were completely infected with bacteria. The growth characteristics of soybean i.e. shoot length, shoot fresh and dry weight, root length, root fresh and dry weight varied among the sites but in general a vigorous and healthy plant growth was observed reflecting N assimilation from native soils. Results showed a substantial variability between sites and this is likely to be due to inter/intra species diversity, as well as

  16. Importance of age in outcome of oesophagogastroduodenoscopy in open access endoscopy: a profile of patients in Sub-Himalayan region of North India

    Directory of Open Access Journals (Sweden)

    B. Sharma


    Full Text Available The Oesophago-Gastro-Duodenoscopy (OGD is done in patients received by either open access system or the conventional system. The presenting complaints and OGD findings may differ among patients with age < 45 yrs and those who are more than 45 yrs old. The referral diagnosis, age, sex, and environmental factors have important implications on the chances of finding and objective abnormality on endoscopy in a patient. This study was aimed to evaluate to evaluate the profile of 1186 patients divided into younger (<45 yrs and older age (45 or > 45 yrs groups presenting for oesophago gastroduodenoscopy through open access referral system in sub-Himalayan region of North India. This is a retrospective study carried out on patients who underwent the OGD from Jan, 2004-Dec, 2004. The study was conducted in Indira Gandhi Medical College situated at a moderate altitude in North India. All patients presenting in Medical College during the study period for OGD were taken into study. The patients were divided into two groups based on age; less than 45 yrs and 45 yrs or more than 45 yrs. Their presenting complaint, age, sex, and OGD findings were recorded. The profile was compared between the two groups. A total of 1186 patients underwent OGD; the females were 451(38% and males were 735(62%; 616(52% were < 45 yrs old and 570(48% of the patients were 45 yrs or older. In the group I 431(70% had a normal endoscopy and 185(30% showed abnormal endoscopic findings. In group II 302(53% had a normal endoscopy, and 268(47% had abnormal findings on endoscopy. Gastric ulcers, mass lesion/new growth were more common in elderly group, Gastro-esophageal reflux disease (GERD was more common in younger group. The presenting complaints were similar in both groups. It is concluded that for the same presenting diagnosis the yield of OGD was more in patients > 45 yrs old. The positivity rate increased from 30% in < 45 yrs to 47% in the elderly cohort. So, all people >45 yrs

  17. Allele Re-sequencing Technologies

    DEFF Research Database (Denmark)

    Byrne, Stephen; Farrell, Jacqueline Danielle; Asp, Torben


    The development of next-generation sequencing technologies has made sequencing an affordable approach for detection of genetic variations associated with various traits. However, the cost of whole genome re-sequencing still remains too high to be feasible for many plant species with large...... alternative to whole genome re-sequencing to identify causative genetic variations in plants. One challenge, however, will be efficient bioinformatics strategies for data handling and analysis from the increasing amount of sequence information....

  18. High myopia in Greater Beijing School Children in 2016.

    Directory of Open Access Journals (Sweden)

    Yin Guo

    Full Text Available To assess prevalence and associated factors of myopia and high myopia in schoolchildren in Greater Beijing.The school-based, cross-sectional Greater Beijing School Children Myopia study was carried out in the year 2016 in 54 schools randomly selected from 15 districts in Beijing. Non-cycloplegic auto-refractometry of the right eyes was performed.The study included 35,745 (99.4% out of 35,968 eligible pupils with a mean age of 12.6±3.4 years (range 6-18 years. Prevalence of myopia defined as myopic refractive error of ≥-0.50 diopters (D,≥-1D,≥-6D,≥-8D and ≥-10D was 70.9%(95% confidence intervals (CI:70.5,71.4, 60.9% (95%CI:60.4,61.4, 8.6%(95%CI:8.4,8.9, 2.2%(95%CI:2.0,2.4, and 0.3% (95%CI:0.3,0.4, respectively. The frequency of high myopia (≥-6D, ≥-8D, ≥-10D increased from 1.5% (95%CI:1.0,2.0, 0.4% (95%CI:0.1,0.6 and 0.1% (95%CI:0.00,0.02, respectively in 10-year-olds to 19.4% (95%CI:17.3,21.6, 5.2% (95%CI:4.0,6.4 and 0.9% (95%CI:0.4,1.5, respectively, in 18-year-olds. Mean refractive error in the 18-year-olds was -3.74±2.56D (median:-3.63D;range:-19.6D to + 6.25D. Higher prevalence of high myopia (≥-6D and ≥-8D was correlated (all P<0.001 with older age (OR:1.18, and 1.15, respectively, female gender (OR: 1.44 and 1.40, respectively, higher body mass index (OR: 1.02 and 1.03, respectively, taller body height (OR: 1.03 and 1.02, respectively, urban region of habitation (OR: 1.26 and 1.33, respectively and higher school type (OR:1.57 and 2.22, respectively. Prevalence of severe high myopia (≥-10D was associated only with older age (P<0.001; OR: 1.44; 95%CI: 1.31, 1.59 but not with any education-related parameter such as higher school type (P = 0.48, urban region of habitation (P = 0.07 or female gender (P = 0.37.In this most recent survey, prevalence of high myopia (≥-6D:19.4%;≥-8D:5.2%;≥-10D:0.9% in 18-year-old school children was higher than in previous surveys from mainland China. In contrast to minor high myopia

  19. Dietary breadth of grizzly bears in the Greater Yellowstone Ecosystem (United States)

    Gunther, Kerry A.; Shoemaker, Rebecca; Frey, Kevin L.; Haroldson, Mark A.; Cain, Steven L.; van Manen, Frank T.; Fortin, Jennifer K.


    Grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem (GYE) are opportunistic omnivores that eat a great diversity of plant and animal species. Changes in climate may affect regional vegetation, hydrology, insects, and fire regimes, likely influencing the abundance, range, and elevational distribution of the plants and animals consumed by GYE grizzly bears. Determining the dietary breadth of grizzly bears is important to document future changes in food resources and how those changes may affect the nutritional ecology of grizzlies. However, no synthesis exists of all foods consumed by grizzly bears in the GYE. We conducted a review of available literature and compiled a list of species consumed by grizzly bears in the GYE. We documented >266 species within 200 genera from 4 kingdoms, including 175 plant, 37 invertebrate, 34 mammal, 7 fungi, 7 bird, 4 fish, 1 amphibian, and 1 algae species as well as 1 soil type consumed by grizzly bears. The average energy values of the ungulates (6.8 kcal/g), trout (Oncorhynchus spp., 6.1 kcal/g), and small mammals (4.5 kcal/g) eaten by grizzlies were higher than those of the plants (3.0 kcal/g) and invertebrates (2.7 kcal/g) they consumed. The most frequently detected diet items were graminoids, ants (Formicidae), whitebark pine seeds (Pinus albicaulis), clover (Trifolium spp.), and dandelion (Taraxacum spp.). The most consistently used foods on a temporal basis were graminoids, ants, whitebark pine seeds, clover, elk (Cervus elaphus), thistle (Cirsium spp.), and horsetail (Equisetum spp.). Historically, garbage was a significant diet item for grizzlies until refuse dumps were closed. Use of forbs increased after garbage was no longer readily available. The list of foods we compiled will help managers of grizzly bears and their habitat document future changes in grizzly bear food habits and how bears respond to changing food resources.

  20. Predictability of Seasonal Rainfall over the Greater Horn of Africa (United States)

    Ngaina, J. N.


    The El Nino-Southern Oscillation (ENSO) is a primary mode of climate variability in the Greater of Africa (GHA). The expected impacts of climate variability and change on water, agriculture, and food resources in GHA underscore the importance of reliable and accurate seasonal climate predictions. The study evaluated different model selection criteria which included the Coefficient of determination (R2), Akaike's Information Criterion (AIC), Bayesian Information Criterion (BIC), and the Fisher information approximation (FIA). A forecast scheme based on the optimal model was developed to predict the October-November-December (OND) and March-April-May (MAM) rainfall. The predictability of GHA rainfall based on ENSO was quantified based on composite analysis, correlations and contingency tables. A test for field-significance considering the properties of finiteness and interdependence of the spatial grid was applied to avoid correlations by chance. The study identified FIA as the optimal model selection criterion. However, complex model selection criteria (FIA followed by BIC) performed better compared to simple approach (R2 and AIC). Notably, operational seasonal rainfall predictions over the GHA makes of simple model selection procedures e.g. R2. Rainfall is modestly predictable based on ENSO during OND and MAM seasons. El Nino typically leads to wetter conditions during OND and drier conditions during MAM. The correlations of ENSO indices with rainfall are statistically significant for OND and MAM seasons. Analysis based on contingency tables shows higher predictability of OND rainfall with the use of ENSO indices derived from the Pacific and Indian Oceans sea surfaces showing significant improvement during OND season. The predictability based on ENSO for OND rainfall is robust on a decadal scale compared to MAM. An ENSO-based scheme based on an optimal model selection criterion can thus provide skillful rainfall predictions over GHA. This study concludes that the

  1. Greater effort increases perceived value in an invertebrate. (United States)

    Czaczkes, Tomer J; Brandstetter, Birgit; di Stefano, Isabella; Heinze, Jürgen


    Expending effort is generally considered to be undesirable. However, both humans and vertebrates will work for a reward they could also get for free. Moreover, cues associated with high-effort rewards are preferred to low-effort associated cues. Many explanations for these counterintuitive findings have been suggested, including cognitive dissonance (self-justification) or a greater contrast in state (e.g., energy or frustration level) before and after an effort-linked reward. Here, we test whether effort expenditure also increases perceived value in ants, using both classical cue-association methods and pheromone deposition, which correlates with perceived value. In 2 separate experimental setups, we show that pheromone deposition is higher toward the reward that requires more effort: 47% more pheromone deposition was performed for rewards reached via a vertical runway (high effort) compared with ones reached via a horizontal runway (low effort), and deposition rates were 28% higher on rough (high effort) versus smooth (low effort) runways. Using traditional cue-association methods, 63% of ants trained on different surface roughness, and 70% of ants trained on different runway elevations, preferred the high-effort related cues on a Y maze. Finally, pheromone deposition to feeders requiring memorization of one path bifurcation was up to 29% higher than to an identical feeder requiring no learning. Our results suggest that effort affects value perception in ants. This effect may stem from a cognitive process, which monitors the change in a generalized hedonic state before and after reward. (PsycINFO Database Record (c) 2018 APA, all rights reserved).

  2. Greater trochanter pain syndrome: A descriptive MR imaging study

    Energy Technology Data Exchange (ETDEWEB)

    Klontzas, Michail E., E-mail:; Karantanas, Apostolos H., E-mail:


    Objective: Greater trochanter pain syndrome (GTPS) is a diverse clinical entity caused by a variety of underlying conditions. We sought to explore the impact of (1) hip morphology, namely the center-edge angle (CEa) and femoral neck-shaft (NSa) angle, (2) hip abductor tendon degeneration, (3) the dimensions of peritrochanteric edema and (4) bursitis, on the presence of GTPS, using MR imaging. Materials and methods: The presence of pain was prospectively assessed blindly by the senior author. CEa and NSa were blindly measured in 174 hip MR examinations, after completion of the clinical evaluation by another evaluator. The existence and dimensions of T2 hyperintensity of the peritrochanteric soft tissues, the existence and dimensions of bursae, as well as degeneration and tearing of gluteus tendons were also recorded. Results: Out of 174 examinations, 91 displayed peritrochanteric edema (group A) and 34 bursitis, all with peritrochanteric edema (group B). A number of 78 patients from both A and B groups, showed gluteus medius tendon degeneration and one tendon tear. CEa of groups A and B were 6° higher than those of normals (group C, P = 0.0038). The mean age of normals was 16.6 years less than in group A and 19.8 years less than in group B (P < 0.0001). Bursitis was associated with pain with a negative predictive value of 97% (P = 0.0003). Conclusion: Acetabular morphology is associated with GTPS and the absence of bursitis was proved to be clinically relevant. Peritrochanteric edema alone was not associated with local pain.

  3. Greater trochanter pain syndrome: A descriptive MR imaging study

    International Nuclear Information System (INIS)

    Klontzas, Michail E.; Karantanas, Apostolos H.


    Objective: Greater trochanter pain syndrome (GTPS) is a diverse clinical entity caused by a variety of underlying conditions. We sought to explore the impact of (1) hip morphology, namely the center-edge angle (CEa) and femoral neck-shaft (NSa) angle, (2) hip abductor tendon degeneration, (3) the dimensions of peritrochanteric edema and (4) bursitis, on the presence of GTPS, using MR imaging. Materials and methods: The presence of pain was prospectively assessed blindly by the senior author. CEa and NSa were blindly measured in 174 hip MR examinations, after completion of the clinical evaluation by another evaluator. The existence and dimensions of T2 hyperintensity of the peritrochanteric soft tissues, the existence and dimensions of bursae, as well as degeneration and tearing of gluteus tendons were also recorded. Results: Out of 174 examinations, 91 displayed peritrochanteric edema (group A) and 34 bursitis, all with peritrochanteric edema (group B). A number of 78 patients from both A and B groups, showed gluteus medius tendon degeneration and one tendon tear. CEa of groups A and B were 6° higher than those of normals (group C, P = 0.0038). The mean age of normals was 16.6 years less than in group A and 19.8 years less than in group B (P < 0.0001). Bursitis was associated with pain with a negative predictive value of 97% (P = 0.0003). Conclusion: Acetabular morphology is associated with GTPS and the absence of bursitis was proved to be clinically relevant. Peritrochanteric edema alone was not associated with local pain

  4. Reserves in western basins: Part 1, Greater Green River basin

    Energy Technology Data Exchange (ETDEWEB)


    This study characterizes an extremely large gas resource located in low permeability, overpressured sandstone reservoirs located below 8,000 feet drill depth in the Greater Green River basin, Wyoming. Total in place resource is estimated at 1,968 Tcf. Via application of geologic, engineering and economic criteria, the portion of this resource potentially recoverable as reserves is estimated. Those volumes estimated include probable, possible and potential categories and total 33 Tcf as a mean estimate of recoverable gas for all plays considered in the basin. Five plays (formations) were included in this study and each was separately analyzed in terms of its overpressured, tight gas resource, established productive characteristics and future reserves potential based on a constant $2/Mcf wellhead gas price scenario. A scheme has been developed to break the overall resource estimate down into components that can be considered as differing technical and economic challenges that must be overcome in order to exploit such resources: in other words, to convert those resources to economically recoverable reserves. Total recoverable reserves estimates of 33 Tcf do not include the existing production from overpressured tight reservoirs in the basin. These have estimated ultimate recovery of approximately 1.6 Tcf, or a per well average recovery of 2.3 Bcf. Due to the fact that considerable pay thicknesses can be present, wells can be economic despite limited drainage areas. It is typical for significant bypassed gas to be present at inter-well locations because drainage areas are commonly less than regulatory well spacing requirements.

  5. Deviance and resistance: Malaria elimination in the greater Mekong subregion. (United States)

    Lyttleton, Chris


    Malaria elimination rather than control is increasingly globally endorsed, requiring new approaches wherein success is not measured by timely treatment of presenting cases but eradicating all presence of infection. This shift has gained urgency as resistance to artemisinin-combination therapies spreads in the Greater Mekong Sub-region (GMS) posing a threat to global health security. In the GMS, endemic malaria persists in forested border areas and elimination will require calibrated approaches to remove remaining pockets of residual infection. A new public health strategy called 'positive deviance' is being used to improve health promotion and community outreach in some of these zones. However, outbreaks sparked by alternative understandings of appropriate behaviour expose the unpredictable nature of 'border malaria' and difficulties eradication faces. Using a recent spike in infections allegedly linked to luxury timber trade in Thai borderlands, this article suggests that opportunities for market engagement can cause people to see 'deviance' as a means to material advancement in ways that increase disease vulnerability. A malaria outbreak in Ubon Ratchathani was investigated during two-week field-visit in November 2014 as part of longer project researching border malaria in Thai provinces. Qualitative data were collected in four villages in Ubon's three most-affected districts. Discussions with villagers focused primarily on changing livelihoods, experience with malaria, and rosewood cutting. Informants included ten men and two women who had recently overnighted in the nearby forest. Data from health officials and villagers are used to frame Ubon's rise in malaria transmission within moral and behavioural responses to expanding commodity supply-chains. The article argues that elimination strategies in the GMS must contend with volatile outbreaks among border populations wherein 'infectiousness' and 'resistance' are not simply pathogen characteristics but also

  6. Interspecific nest parasitism by chukar on greater sage-grouse (United States)

    Fearon, Michelle L.; Coates, Peter S.


    Nest parasitism occurs when a female bird lays eggs in the nest of another and the host incubates the eggs and may provide some form of parental care for the offspring (Lyon and Eadie 1991). Precocial birds (e.g., Galliformes and Anseriformes) are typically facultative nest parasites of both their own and other species (Lyon and Eadie 1991). This behavior increases a female’s reproductive success when she parasitizes other nests while simultaneously raising her own offspring. Both interspecific and conspecific nest parasitism have been well documented in several families of the order Galliformes, particularly the Phasianidae (Lyon and Eadie 1991, Geffen and Yom-Tov 2001, Krakauer and Kimball 2009). The Chukar (Alectoris chukar) has been widely introduced as a game bird to western North America from Eurasia and is now well established within the Great Basin from northeastern California east to Utah and north to Idaho and Oregon (Christensen 1996). Over much of this range the Chukar occurs with other phasianids, including the native Greater Sage-Grouse (Centrocercus urophasianus), within sagebrush (Artemisia spp.) steppe (Christensen 1996, Schroeder et al. 1999, Connelly et al. 2000). Chukar typically exploit a broader range of habitats than do sage-grouse, but both species use the same species of sagebrush and other shrubs for nesting cover (Christensen 1996, Schroeder et al. 1999). Chukar are known to parasitize nests of other individuals of their own species (Geffen and Yom-Tov 2001), but we are unaware of reported evidence that Chukar may parasitize nests of sage-grouse. Here we describe a case of a Chukar parasitizing a sage-grouse nest in the sagebrush steppe of western Nevada.

  7. Multilocus Sequence Typing


    Belén, Ana; Pavón, Ibarz; Maiden, Martin C.J.


    Multilocus sequence typing (MLST) was first proposed in 1998 as a typing approach that enables the unambiguous characterization of bacterial isolates in a standardized, reproducible, and portable manner using the human pathogen Neisseria meningitidis as the exemplar organism. Since then, the approach has been applied to a large and growing number of organisms by public health laboratories and research institutions. MLST data, shared by investigators over the world via the Internet, have been ...

  8. Achalasia Carcinoma Sequence


    Makmun, Dadang


    We report a case of carcinoma of the esophagus in a 58 years old woman with achalasia, who has been diagnosed since 30 years ago, which initiated by surgical treatment (myotomy) and the symptoms recurred since 3 years ago. According to the progress of the disease, Malignancy was strongly suspected due to prolonged stasis and mucosal irritation caused by achalasia (achalasia carcinoma sequence). Because of these contributing factors for the development of serious complications such as Malignan...

  9. Views That Are Shared With Others Are Expressed With Greater Confidence and Greater Fluency Independent of Any Social Influence. (United States)

    Koriat, Asher; Adiv, Shiri; Schwarz, Norbert


    Research on group influence has yielded a prototypical majority effect (PME): Majority views are endorsed faster and with greater confidence than minority views, with the difference increasing with majority size. The PME was attributed to conformity pressure enhancing confidence in consensual views and causing inhibition in venturing deviant opinions. Our results, however, indicate that PME for binary choices can arise from the process underlying confidence and latency independent of social influence. PME was demonstrated for tasks and conditions that are stripped of social relevance; it was observed in within-individual analyses in contrasting the individual's more frequent and less frequent responses to the same item, and was found for the predictions of others' responses. A self-consistency model, which assumes that choice and confidence are based on the sampling of representations from a commonly shared pool of representations, yielded a PME for confidence and latency. Behavioral implications of the results are discussed. © 2015 by the Society for Personality and Social Psychology, Inc.

  10. Sequencing BPS spectra

    Energy Technology Data Exchange (ETDEWEB)

    Gukov, Sergei [Walter Burke Institute for Theoretical Physics, California Institute of Technology,1200 E California Blvd, Pasadena, CA 91125 (United States); Max-Planck-Institut für Mathematik,Vivatsgasse 7, D-53111 Bonn (Germany); Nawata, Satoshi [Walter Burke Institute for Theoretical Physics, California Institute of Technology,1200 E California Blvd, Pasadena, CA 91125 (United States); Centre for Quantum Geometry of Moduli Spaces, University of Aarhus,Nordre Ringgade 1, DK-8000 (Denmark); Saberi, Ingmar [Walter Burke Institute for Theoretical Physics, California Institute of Technology,1200 E California Blvd, Pasadena, CA 91125 (United States); Stošić, Marko [CAMGSD, Departamento de Matemática, Instituto Superior Técnico,Av. Rovisco Pais, 1049-001 Lisbon (Portugal); Mathematical Institute SANU,Knez Mihajlova 36, 11000 Belgrade (Serbia); Sułkowski, Piotr [Walter Burke Institute for Theoretical Physics, California Institute of Technology,1200 E California Blvd, Pasadena, CA 91125 (United States); Faculty of Physics, University of Warsaw,ul. Pasteura 5, 02-093 Warsaw (Poland)


    This paper provides both a detailed study of color-dependence of link homologies, as realized in physics as certain spaces of BPS states, and a broad study of the behavior of BPS states in general. We consider how the spectrum of BPS states varies as continuous parameters of a theory are perturbed. This question can be posed in a wide variety of physical contexts, and we answer it by proposing that the relationship between unperturbed and perturbed BPS spectra is described by a spectral sequence. These general considerations unify previous applications of spectral sequence techniques to physics, and explain from a physical standpoint the appearance of many spectral sequences relating various link homology theories to one another. We also study structural properties of colored HOMFLY homology for links and evaluate Poincaré polynomials in numerous examples. Among these structural properties is a novel “sliding” property, which can be explained by using (refined) modular S-matrix. This leads to the identification of modular transformations in Chern-Simons theory and 3d N=2 theory via the 3d/3d correspondence. Lastly, we introduce the notion of associated varieties as classical limits of recursion relations of colored superpolynomials of links, and study their properties.

  11. Sequencing BPS spectra

    International Nuclear Information System (INIS)

    Gukov, Sergei; Nawata, Satoshi; Saberi, Ingmar; Stošić, Marko; Sułkowski, Piotr


    This paper provides both a detailed study of color-dependence of link homologies, as realized in physics as certain spaces of BPS states, and a broad study of the behavior of BPS states in general. We consider how the spectrum of BPS states varies as continuous parameters of a theory are perturbed. This question can be posed in a wide variety of physical contexts, and we answer it by proposing that the relationship between unperturbed and perturbed BPS spectra is described by a spectral sequence. These general considerations unify previous applications of spectral sequence techniques to physics, and explain from a physical standpoint the appearance of many spectral sequences relating various link homology theories to one another. We also study structural properties of colored HOMFLY homology for links and evaluate Poincaré polynomials in numerous examples. Among these structural properties is a novel “sliding” property, which can be explained by using (refined) modular S-matrix. This leads to the identification of modular transformations in Chern-Simons theory and 3d N=2 theory via the 3d/3d correspondence. Lastly, we introduce the notion of associated varieties as classical limits of recursion relations of colored superpolynomials of links, and study their properties.

  12. Image sequence analysis

    CERN Document Server


    The processing of image sequences has a broad spectrum of important applica­ tions including target tracking, robot navigation, bandwidth compression of TV conferencing video signals, studying the motion of biological cells using microcinematography, cloud tracking, and highway traffic monitoring. Image sequence processing involves a large amount of data. However, because of the progress in computer, LSI, and VLSI technologies, we have now reached a stage when many useful processing tasks can be done in a reasonable amount of time. As a result, research and development activities in image sequence analysis have recently been growing at a rapid pace. An IEEE Computer Society Workshop on Computer Analysis of Time-Varying Imagery was held in Philadelphia, April 5-6, 1979. A related special issue of the IEEE Transactions on Pattern Anal­ ysis and Machine Intelligence was published in November 1980. The IEEE Com­ puter magazine has also published a special issue on the subject in 1981. The purpose of this book ...

  13. The outcome of endoscopy for recalcitrant greater trochanteric pain syndrome. (United States)

    Drummond, James; Fary, Camdon; Tran, Phong


    Greater trochanteric pain syndrome (GTPS), previously referred as trochanteric bursitis, is a debilitating condition characterised by chronic lateral hip pain. The syndrome is thought to relate to gluteal tendinopathy, with most cases responding to non-operative treatment. A number of open and endoscopic surgical techniques targeting the iliotibial band, trochanteric bursa and gluteal tendons have, however, been described for severe recalcitrant cases. We report the outcomes of one such endoscopic approach here. We retrospectively reviewed 49 patients (57 operations) who had undergone endoscopic longitudinal vertical iliotibial band release and trochanteric bursectomy. Inclusion criteria included diagnosed GTPS with a minimum of six months of non-operative treatment. Exclusion criteria included concomitant intra- or extra-articular hip pathology and previous hip surgery including total hip arthroplasty. Outcomes were assessed using the Visual Analogue Scale, Oxford hip Score and International Hip Outcome Tool (iHOT-33). The series included 42 females and 7 males with a mean age of 65.0 years (26.7-88.6). Mean follow-up time was 20.7 months (5.3-41.2). Eight patients had full thickness gluteal tendon tears, of which 7 were repaired. Adjuvant PRP was injected intraoperatively in 38 of 57 operations (67.2 %). At follow-up, overall mean Visual Analogue Scale values had decreased from 7.8 to 2.8 (p < 0.001), Oxford hip Scores had increased from 20.4 to 37.3 (p < 0.001) and iHOT-33 scores had increased from 23.8 to 70.2 (p < 0.001). Of the 57 operations performed, patients reported feeling very satisfied with the surgical outcome in 28 operations (49.1 %), satisfied in 17 operations (29.8 %) and less than satisfied in 12 operations (21.1 %). While the majority of patients with GTPS will improve with non-operative management, endoscopic iliotibial band release, trochanteric bursectomy and gluteal tendon repair is a safe and effective treatment for severe

  14. Malaria in the Greater Mekong Subregion: Heterogeneity and Complexity (United States)

    Cui, Liwang; Yan, Guiyun; Sattabongkot, Jetsumon; Cao, Yaming; Chen, Bin; Chen, Xiaoguang; Fan, Qi; Fang, Qiang; Jongwutiwes, Somchai; Parker, Daniel; Sirichaisinthop, Jeeraphat; Kyaw, Myat Phone; Su, Xin-zhuan; Yang, Henglin; Yang, Zhaoqing; Wang, Baomin; Xu, Jianwei; Zheng, Bin; Zhong, Daibin; Zhou, Guofa


    The Greater Mekong Subregion (GMS), comprised of six countries including Cambodia, China's Yunnan Province, Lao PDR, Myanmar (Burma), Thailand and Vietnam, is one of the most threatening foci of malaria. Since the initiation of the WHO's Mekong Malaria Program a decade ago, malaria situation in the GMS has greatly improved, reflected in the continuous decline in annual malaria incidence and deaths. However, as many nations are moving towards malaria elimination, the GMS nations still face great challenges. Malaria epidemiology in this region exhibits enormous geographical heterogeneity with Myanmar and Cambodia remaining high-burden countries. Within each country, malaria distribution is also patchy, exemplified by ‘border malaria’ and ‘forest malaria’ with high transmission occurring along international borders and in forests or forest fringes, respectively. ‘Border malaria’ is extremely difficult to monitor, and frequent malaria introductions by migratory human populations constitute a major threat to neighboring, malaria-eliminating countries. Therefore, coordination between neighboring countries is essential for malaria elimination from the entire region. In addition to these operational difficulties, malaria control in the GMS also encounters several technological challenges. Contemporary malaria control measures rely heavily on effective chemotherapy and insecticide control of vector mosquitoes. However, the spread of multidrug resistance and potential emergence of artemisinin resistance in Plasmodium falciparum make resistance management a high priority in the GMS. This situation is further worsened by the circulation of counterfeit and substandard artemisinin-related drugs. In most endemic areas of the GMS, P. falciparum and P. vivax coexist, and in recent malaria control history, P. vivax has demonstrated remarkable resilience to control measures. Deployment of the only registered drug (primaquine) for the radical cure of vivax malaria is

  15. Greater sage-grouse population trends across Wyoming (United States)

    Edmunds, David; Aldridge, Cameron L.; O'Donnell, Michael; Monroe, Adrian


    The scale at which analyses are performed can have an effect on model results and often one scale does not accurately describe the ecological phenomena of interest (e.g., population trends) for wide-ranging species: yet, most ecological studies are performed at a single, arbitrary scale. To best determine local and regional trends for greater sage-grouse (Centrocercus urophasianus) in Wyoming, USA, we modeled density-independent and -dependent population growth across multiple spatial scales relevant to management and conservation (Core Areas [habitat encompassing approximately 83% of the sage-grouse population on ∼24% of surface area in Wyoming], local Working Groups [7 regional areas for which groups of local experts are tasked with implementing Wyoming's statewide sage-grouse conservation plan at the local level], Core Area status (Core Area vs. Non-Core Area) by Working Groups, and Core Areas by Working Groups). Our goal was to determine the influence of fine-scale population trends (Core Areas) on larger-scale populations (Working Group Areas). We modeled the natural log of change in population size ( peak M lek counts) by time to calculate the finite rate of population growth (λ) for each population of interest from 1993 to 2015. We found that in general when Core Area status (Core Area vs. Non-Core Area) was investigated by Working Group Area, the 2 populations trended similarly and agreed with the overall trend of the Working Group Area. However, at the finer scale where Core Areas were analyzed separately, Core Areas within the same Working Group Area often trended differently and a few large Core Areas could influence the overall Working Group Area trend and mask trends occurring in smaller Core Areas. Relatively close fine-scale populations of sage-grouse can trend differently, indicating that large-scale trends may not accurately depict what is occurring across the landscape (e.g., local effects of gas and oil fields may be masked by increasing

  16. Analysis of DNA restriction fragments greater than 5.7 Mb in size from the centromeric region of human chromosomes. (United States)

    Arn, P H; Li, X; Smith, C; Hsu, M; Schwartz, D C; Jabs, E W


    Pulsed electrophoresis was used to study the organization of the human centromeric region. Genomic DNA was digested with rare-cutting enzymes. DNA fragments from 0.2 to greater than 5.7 Mb were separated by electrophoresis and hybridized with alphoid and simple DNA repeats. Rare-cutting enzymes (Mlu I, Nar I, Not I, Nru I, Sal I, Sfi I, Sst II) demonstrated fewer restriction sites at centromeric regions than elsewhere in the genome. The enzyme Not I had the fewest restriction sites at centromeric regions. As much as 70% of these sequences from the centromeric region are present in Not I DNA fragments greater than 5.7 and estimated to be as large as 10 Mb in size. Other repetitive sequences such as short interspersed repeated segments (SINEs), long interspersed repeated segments (LINEs), ribosomal DNA, and mini-satellite DNA that are not enriched at the centromeric region, are not enriched in Not I fragments of greater than 5.7 Mb in size.

  17. Rapid-Sequence Serial Sexual Homicides. (United States)

    Schlesinger, Louis B; Ramirez, Stephanie; Tusa, Brittany; Jarvis, John P; Erdberg, Philip


    Serial sexual murderers have been described as committing homicides in a methodical manner, taking substantial time between offenses to elude the authorities. The results of our study of the temporal patterns (i.e., the length of time between homicides) of a nonrandom national sample of 44 serial sexual murderers and their 201 victims indicate that this representation may not always be accurate. Although 25 offenders (56.8%) killed with longer than a 14-day period between homicides, a sizeable subgroup was identified: 19 offenders (43.2%) who committed homicides in rapid-sequence fashion, with fewer than 14 days between all or some of the murders. Six offenders (13.6%) killed all their victims in one rapid-sequence, spree-like episode, with homicides just days apart or sometimes two murders in the same day. Thirteen offenders (29.5%) killed in one or two rapid-sequence clusters (i.e., more than one murder within a 14-day period, as well as additional homicides with greater than 14 days between each). The purpose of our study was to describe this subgroup of rapid-sequence offenders who have not been identified until now. These findings argue for accelerated forensic assessments of dangerousness and public safety when a sexual murder is detected. Psychiatric disorders with rapidly occurring symptom patterns, or even atypical mania or mood dysregulation, may serve as exemplars for understanding this extraordinary group of offenders. © 2017 American Academy of Psychiatry and the Law.

  18. Foundations of Sequence-to-Sequence Modeling for Time Series


    Kuznetsov, Vitaly; Mariet, Zelda


    The availability of large amounts of time series data, paired with the performance of deep-learning algorithms on a broad class of problems, has recently led to significant interest in the use of sequence-to-sequence models for time series forecasting. We provide the first theoretical analysis of this time series forecasting framework. We include a comparison of sequence-to-sequence modeling to classical time series models, and as such our theory can serve as a quantitative guide for practiti...

  19. Novel expressed sequence tag- simple sequence repeats (EST ...

    African Journals Online (AJOL)

    Using different bioinformatic criteria, the SUCEST database was used to mine for simple sequence repeat (SSR) markers. Among 42,189 clusters, 1,425 expressed sequence tag- simple sequence repeats (EST-SSRs) were identified in silico. Trinucleotide repeats were the most abundant SSRs detected. Of 212 primer pairs ...

  20. Infinite sequences and series

    CERN Document Server

    Knopp, Konrad


    One of the finest expositors in the field of modern mathematics, Dr. Konrad Knopp here concentrates on a topic that is of particular interest to 20th-century mathematicians and students. He develops the theory of infinite sequences and series from its beginnings to a point where the reader will be in a position to investigate more advanced stages on his own. The foundations of the theory are therefore presented with special care, while the developmental aspects are limited by the scope and purpose of the book. All definitions are clearly stated; all theorems are proved with enough detail to ma

  1. Fast global sequence alignment technique

    KAUST Repository

    Bonny, Mohamed Talal; Salama, Khaled N.


    fast alignment algorithm, called 'Alignment By Scanning' (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the wellknown sequence alignment algorithms, the 'GAP' (which is heuristic) and the 'Needleman

  2. Next-Generation Sequencing Platforms (United States)

    Mardis, Elaine R.


    Automated DNA sequencing instruments embody an elegant interplay among chemistry, engineering, software, and molecular biology and have built upon Sanger's founding discovery of dideoxynucleotide sequencing to perform once-unfathomable tasks. Combined with innovative physical mapping approaches that helped to establish long-range relationships between cloned stretches of genomic DNA, fluorescent DNA sequencers produced reference genome sequences for model organisms and for the reference human genome. New types of sequencing instruments that permit amazing acceleration of data-collection rates for DNA sequencing have been developed. The ability to generate genome-scale data sets is now transforming the nature of biological inquiry. Here, I provide an historical perspective of the field, focusing on the fundamental developments that predated the advent of next-generation sequencing instruments and providing information about how these instruments work, their application to biological research, and the newest types of sequencers that can extract data from single DNA molecules.

  3. Rapid Polymer Sequencer (United States)

    Stolc, Viktor (Inventor); Brock, Matthew W (Inventor)


    Method and system for rapid and accurate determination of each of a sequence of unknown polymer components, such as nucleic acid components. A self-assembling monolayer of a selected substance is optionally provided on an interior surface of a pipette tip, and the interior surface is immersed in a selected liquid. A selected electrical field is impressed in a longitudinal direction, or in a transverse direction, in the tip region, a polymer sequence is passed through the tip region, and a change in an electrical current signal is measured as each polymer component passes through the tip region. Each of the measured changes in electrical current signals is compared with a database of reference electrical change signals, with each reference signal corresponding to an identified polymer component, to identify the unknown polymer component with a reference polymer component. The nanopore preferably has a pore inner diameter of no more than about 40 nm and is prepared by heating and pulling a very small section of a glass tubing.

  4. The advantages of SMRT sequencing


    Roberts, Richard J; Carneiro, Mauricio O; Schatz, Michael C


    Of the current next-generation sequencing technologies, SMRT sequencing is sometimes overlooked. However, attributes such as long reads, modified base detection and high accuracy make SMRT a useful technology and an ideal approach to the complete sequencing of small genomes.

  5. Putting instruction sequences into effect

    NARCIS (Netherlands)

    Bergstra, J.A.


    An attempt is made to define the concept of execution of an instruction sequence. It is found to be a special case of directly putting into effect of an instruction sequence. Directly putting into effect of an instruction sequences comprises interpretation as well as execution. Directly putting into

  6. Region segmentation along image sequence

    International Nuclear Information System (INIS)

    Monchal, L.; Aubry, P.


    A method to extract regions in sequence of images is proposed. Regions are not matched from one image to the following one. The result of a region segmentation is used as an initialization to segment the following and image to track the region along the sequence. The image sequence is exploited as a spatio-temporal event. (authors). 12 refs., 8 figs

  7. Source modeling of the 2015 Mw 7.8 Nepal (Gorkha) earthquake sequence: Implications for geodynamics and earthquake hazards (United States)

    McNamara, D. E.; Yeck, W. L.; Barnhart, W. D.; Schulte-Pelkum, V.; Bergman, E.; Adhikari, L. B.; Dixit, A.; Hough, S. E.; Benz, H. M.; Earle, P. S.


    The Gorkha earthquake on April 25th, 2015 was a long anticipated, low-angle thrust-faulting event on the shallow décollement between the India and Eurasia plates. We present a detailed multiple-event hypocenter relocation analysis of the Mw 7.8 Gorkha Nepal earthquake sequence, constrained by local seismic stations, and a geodetic rupture model based on InSAR and GPS data. We integrate these observations to place the Gorkha earthquake sequence into a seismotectonic context and evaluate potential earthquake hazard. Major results from this study include (1) a comprehensive catalog of calibrated hypocenters for the Gorkha earthquake sequence; (2) the Gorkha earthquake ruptured a 150 × 60 km patch of the Main Himalayan Thrust (MHT), the décollement defining the plate boundary at depth, over an area surrounding but predominantly north of the capital city of Kathmandu (3) the distribution of aftershock seismicity surrounds the mainshock maximum slip patch; (4) aftershocks occur at or below the mainshock rupture plane with depths generally increasing to the north beneath the higher Himalaya, possibly outlining a 10-15 km thick subduction channel between the overriding Eurasian and subducting Indian plates; (5) the largest Mw 7.3 aftershock and the highest concentration of aftershocks occurred to the southeast the mainshock rupture, on a segment of the MHT décollement that was positively stressed towards failure; (6) the near surface portion of the MHT south of Kathmandu shows no aftershocks or slip during the mainshock. Results from this study characterize the details of the Gorkha earthquake sequence and provide constraints on where earthquake hazard remains high, and thus where future, damaging earthquakes may occur in this densely populated region. Up-dip segments of the MHT should be considered to be high hazard for future damaging earthquakes.

  8. Log-balanced combinatorial sequences

    Directory of Open Access Journals (Sweden)

    Tomislav Došlic


    Full Text Available We consider log-convex sequences that satisfy an additional constraint imposed on their rate of growth. We call such sequences log-balanced. It is shown that all such sequences satisfy a pair of double inequalities. Sufficient conditions for log-balancedness are given for the case when the sequence satisfies a two- (or more- term linear recurrence. It is shown that many combinatorially interesting sequences belong to this class, and, as a consequence, that the above-mentioned double inequalities are valid for all of them.

  9. Evaluation of a pooled strategy for high-throughput sequencing of cosmid clones from metagenomic libraries. (United States)

    Lam, Kathy N; Hall, Michael W; Engel, Katja; Vey, Gregory; Cheng, Jiujun; Neufeld, Josh D; Charles, Trevor C


    High-throughput sequencing methods have been instrumental in the growing field of metagenomics, with technological improvements enabling greater throughput at decreased costs. Nonetheless, the economy of high-throughput sequencing cannot be fully leveraged in the subdiscipline of functional metagenomics. In this area of research, environmental DNA is typically cloned to generate large-insert libraries from which individual clones are isolated, based on specific activities of interest. Sequence data are required for complete characterization of such clones, but the sequencing of a large set of clones requires individual barcode-based sample preparation; this can become costly, as the cost of clone barcoding scales linearly with the number of clones processed, and thus sequencing a large number of metagenomic clones often remains cost-prohibitive. We investigated a hybrid Sanger/Illumina pooled sequencing strategy that omits barcoding altogether, and we evaluated this strategy by comparing the pooled sequencing results to reference sequence data obtained from traditional barcode-based sequencing of the same set of clones. Using identity and coverage metrics in our evaluation, we show that pooled sequencing can generate high-quality sequence data, without producing problematic chimeras. Though caveats of a pooled strategy exist and further optimization of the method is required to improve recovery of complete clone sequences and to avoid circumstances that generate unrecoverable clone sequences, our results demonstrate that pooled sequencing represents an effective and low-cost alternative for sequencing large sets of metagenomic clones.

  10. New MR pulse sequence

    International Nuclear Information System (INIS)

    Harms, S.E.; Flamig, D.P.; Griffey, R.H.


    This paper describes a method for fat suppression for three-dimensional MR imaging. The FATS (fat-suppressed acquisition with echo time shortened) sequence employs a pair of opposing adiabatic half-passage RF pulses tuned on fat resonance. The imaging parameters are as follows: TR, 20 msec; TE, 21.7-3.2 msec; 1,024 x 128 x 128 acquired matrix; imaging time, approximately 11 minutes. A series of 54 examinations were performed. Excellent fat suppression with water excitation is achieved in all cases. The orbital images demonstrate superior resolution of small orbital lesions. The high signal-to-noise ratio (SNR) in cranial studies demonstrates excellent petrous bone and internal auditory canal anatomy

  11. Exome sequencing for prenatal diagnosis of fetuses with sonographic abnormalities. (United States)

    Drury, Suzanne; Williams, Hywel; Trump, Natalie; Boustred, Christopher; Lench, Nicholas; Scott, Richard H; Chitty, Lyn S


    In the absence of aneuploidy or other pathogenic cytogenetic abnormality, fetuses with increased nuchal translucency (NT ≥ 3.5 mm) and/or other sonographic abnormalities have a greater incidence of genetic syndromes, but defining the underlying pathology can be challenging. Here, we investigate the value of whole exome sequencing in fetuses with sonographic abnormalities but normal microarray analysis. Whole exome sequencing was performed on DNA extracted from chorionic villi or amniocytes in 24 fetuses with unexplained ultrasound findings. In the first 14 cases sequencing was initially performed on fetal DNA only. For the remaining 10, the trio of fetus, mother and father was sequenced simultaneously. In 21% (5/24) cases, exome sequencing provided definitive diagnoses (Milroy disease, hypophosphatasia, achondrogenesis type 2, Freeman-Sheldon syndrome and Baraitser-Winter Syndrome). In a further case, a plausible diagnosis of orofaciodigital syndrome type 6 was made. In two others, a single mutation in an autosomal recessive gene was identified, but incomplete sequencing coverage precluded exclusion of the presence of a second mutation. Whole exome sequencing improves prenatal diagnosis in euploid fetuses with abnormal ultrasound scans. In order to expedite interpretation of results, trio sequencing should be employed, but interpretation can still be compromised by incomplete coverage of relevant genes. © 2015 John Wiley & Sons, Ltd.

  12. A programmable method for massively parallel targeted sequencing (United States)

    Hopmans, Erik S.; Natsoulis, Georges; Bell, John M.; Grimes, Susan M.; Sieh, Weiva; Ji, Hanlee P.


    We have developed a targeted resequencing approach referred to as Oligonucleotide-Selective Sequencing. In this study, we report a series of significant improvements and novel applications of this method whereby the surface of a sequencing flow cell is modified in situ to capture specific genomic regions of interest from a sample and then sequenced. These improvements include a fully automated targeted sequencing platform through the use of a standard Illumina cBot fluidics station. Targeting optimization increased the yield of total on-target sequencing data 2-fold compared to the previous iteration, while simultaneously increasing the percentage of reads that could be mapped to the human genome. The described assays cover up to 1421 genes with a total coverage of 5.5 Megabases (Mb). We demonstrate a 10-fold abundance uniformity of greater than 90% in 1 log distance from the median and a targeting rate of up to 95%. We also sequenced continuous genomic loci up to 1.5 Mb while simultaneously genotyping SNPs and genes. Variants with low minor allele fraction were sensitively detected at levels of 5%. Finally, we determined the exact breakpoint sequence of cancer rearrangements. Overall, this approach has high performance for selective sequencing of genome targets, configuration flexibility and variant calling accuracy. PMID:24782526

  13. Polyfluorophore Labels on DNA: Dramatic Sequence Dependence of Quenching (United States)

    Teo, Yin Nah; Wilson, James N.


    We describe studies carried out in the DNA context to test how a common fluorescence quencher, dabcyl, interacts with oligodeoxynu-cleoside fluorophores (ODFs)—a system of stacked, electronically interacting fluorophores built on a DNA scaffold. We tested twenty different tetrameric ODF sequences containing varied combinations and orderings of pyrene (Y), benzopyrene (B), perylene (E), dimethylaminostilbene (D), and spacer (S) monomers conjugated to the 3′ end of a DNA oligomer. Hybridization of this probe sequence to a dabcyl-labeled complementary strand resulted in strong quenching of fluorescence in 85% of the twenty ODF sequences. The high efficiency of quenching was also established by their large Stern–Volmer constants (KSV) of between 2.1 × 104 and 4.3 × 105M−1, measured with a free dabcyl quencher. Interestingly, quenching of ODFs displayed strong sequence dependence. This was particularly evident in anagrams of ODF sequences; for example, the sequence BYDS had a KSV that was approximately two orders of magnitude greater than that of BSDY, which has the same dye composition. Other anagrams, for example EDSY and ESYD, also displayed different responses upon quenching by dabcyl. Analysis of spectra showed that apparent excimer and exciplex emission bands were quenched with much greater efficiency compared to monomer emission bands by at least an order of magnitude. This suggests an important role played by delocalized excited states of the π stack of fluorophores in the amplified quenching of fluorescence. PMID:19780115

  14. Quantum-Sequencing: Fast electronic single DNA molecule sequencing (United States)

    Casamada Ribot, Josep; Chatterjee, Anushree; Nagpal, Prashant


    A major goal of third-generation sequencing technologies is to develop a fast, reliable, enzyme-free, high-throughput and cost-effective, single-molecule sequencing method. Here, we present the first demonstration of unique ``electronic fingerprint'' of all nucleotides (A, G, T, C), with single-molecule DNA sequencing, using Quantum-tunneling Sequencing (Q-Seq) at room temperature. We show that the electronic state of the nucleobases shift depending on the pH, with most distinct states identified at acidic pH. We also demonstrate identification of single nucleotide modifications (methylation here). Using these unique electronic fingerprints (or tunneling data), we report a partial sequence of beta lactamase (bla) gene, which encodes resistance to beta-lactam antibiotics, with over 95% success rate. These results highlight the potential of Q-Seq as a robust technique for next-generation sequencing.

  15. Pre-main-sequence depletion of Li-6 and Li-7

    International Nuclear Information System (INIS)

    Proffitt, C.R.; Michaud, G.


    Depletion of Li-6 and Li-7 during premain-sequence contraction has been calculated for several evolutionary sequences. Slightly greater Li-7 depletion was found than by other recent workers. On the premain sequence, Li-6 is depleted by a factor of at least 10 in the present models for stars with T(eff) lower than 6800 K on the main sequence. Because of the shorter destruction time scale for Li-6 as compared to Li-7, the determination of the abundances of these two isotopes would place strict constraints on the structure of premain-sequence stars. 39 refs

  16. Universal sequence map (USM of arbitrary discrete sequences

    Directory of Open Access Journals (Sweden)

    Almeida Jonas S


    Full Text Available Abstract Background For over a decade the idea of representing biological sequences in a continuous coordinate space has maintained its appeal but not been fully realized. The basic idea is that any sequence of symbols may define trajectories in the continuous space conserving all its statistical properties. Ideally, such a representation would allow scale independent sequence analysis – without the context of fixed memory length. A simple example would consist on being able to infer the homology between two sequences solely by comparing the coordinates of any two homologous units. Results We have successfully identified such an iterative function for bijective mappingψ of discrete sequences into objects of continuous state space that enable scale-independent sequence analysis. The technique, named Universal Sequence Mapping (USM, is applicable to sequences with an arbitrary length and arbitrary number of unique units and generates a representation where map distance estimates sequence similarity. The novel USM procedure is based on earlier work by these and other authors on the properties of Chaos Game Representation (CGR. The latter enables the representation of 4 unit type sequences (like DNA as an order free Markov Chain transition table. The properties of USM are illustrated with test data and can be verified for other data by using the accompanying web-based tool: Conclusions USM is shown to enable a statistical mechanics approach to sequence analysis. The scale independent representation frees sequence analysis from the need to assume a memory length in the investigation of syntactic rules.

  17. FTIR measurements of OH in deformed quartz and feldspars of the South Tibetan Detachment, Greater Himalaya (United States)

    Jezek, L.; Law, R. D.; Jessup, M. J.; Searle, M. P.; Kronenberg, A. K.


    OH absorption bands due to water in deformed quartz and feldspar grains of mylonites from the low-angle Lhotse Detachment (of the South Tibetan Detachment System, Rongbuk Valley north of Mount Everest) have been measured by Fourier Transform Infrared (FTIR) Spectroscopy. Previous microstructural studies have shown that these rocks deformed by dislocation creep at high temperature conditions in the middle crust (lower - middle amphibolite facies), and oxygen isotope studies suggest significant influx of meteoric water. OH absorption bands at 3400 cm-1 of quartz mylonites from the footwall of the Lhotse Detachment Fault are large, with the character of the molecular water band due to fluid inclusions in milky quartz. Mean water contents depend on structural position relative to the core of the Lhotse Detachment, from 1000 ppm (OH/106 Si) at 420 m below the fault to 11,350 (+/-1095) ppm near its center. The gradient in OH content shown by quartz grains implies influx of meteoric water along the Lhotse Detachment from the Tibetan Plateau ground surface to middle crustal depths, and significant fluid penetration into the extruding Himalayan slab by intergranular, permeable fluid flow processes. Feldspars of individual samples have comparable water contents to those of quartz and some are wetter. Large water contents of quartz and feldspar may have contributed to continued deformation and strain localization on the South Tibetan Detachment System. Dislocation creep in quartz is facilitated by water in laboratory experiments, and the water contents of the Lhotse fault rocks are similar to (and even larger than) water contents of quartz experimentally deformed during water weakening. Water contents of feldspars are comparable to those of plagioclase aggregates deformed experimentally by dislocation and diffusion creep under wet conditions.

  18. A DNA Structure-Based Bionic Wavelet Transform and Its Application to DNA Sequence Analysis

    Directory of Open Access Journals (Sweden)

    Fei Chen


    Full Text Available DNA sequence analysis is of great significance for increasing our understanding of genomic functions. An important task facing us is the exploration of hidden structural information stored in the DNA sequence. This paper introduces a DNA structure-based adaptive wavelet transform (WT – the bionic wavelet transform (BWT – for DNA sequence analysis. The symbolic DNA sequence can be separated into four channels of indicator sequences. An adaptive symbol-to-number mapping, determined from the structural feature of the DNA sequence, was introduced into WT. It can adjust the weight value of each channel to maximise the useful energy distribution of the whole BWT output. The performance of the proposed BWT was examined by analysing synthetic and real DNA sequences. Results show that BWT performs better than traditional WT in presenting greater energy distribution. This new BWT method should be useful for the detection of the latent structural features in future DNA sequence analysis.

  19. Greater Expectations (United States)

    McCloskey, Patrick J.


    Julius Bennett was once a disinterested student destined to become a dropout. Then he enrolled in Amistad Academy, an academically focused charter middle school intent on narrowing the achievement gap between urban and suburban kids located in New Haven, Connecticut. Now Julius is making plans for college. In this article the author details the…

  20. Greater Melbourne. (United States)

    Wulff, M; Burke, T; Newton, P


    With more than a quarter of its population born overseas, Melbourne, Australia, is rapidly changing from an all-white British outpost to a multicultural, multilingual community. Since the "white" Australian policy was abandoned after World War II, 3 million immigrants from 100 different countries have moved to Australia. Most of the immigrants come from New Zealand, Rhodesia, South Africa, Britain, Ireland, Greece, Turkey, Yugoslavia, Poland, and Indochina. Melbourne is Australia's 2nd largest city and houses 1 out of 5 Australians. Its 1984 population was 2,888,400. Melbourne's housing pattern consists of subdivisions; 75% of the population live in detached houses. Between 1954 and 1961 Melbourne grew at an annual rate of 3.5%; its growth rate between 1961 and 1971 still averaged 2.5%. In the 1970s the growth rate slowed to 1.4%. Metropolitan Melbourne has no central government but is divided into 56 councils and 8 regions. Both Australia's and Melbourne's fertility rates are high compared to the rest of the developed world, partly because of their younger age structure. 41% of Melbourne's population was under age 24 in 1981. Single-person households are growing faster than any other type. 71% of the housing is owner-occupied; in 1981 the median sized dwelling had 5.2 rooms. Public housing only accounts for 2.6% of all dwellings. Fewer students graduate from high school in Australia than in other developed countries, and fewer graduates pursue higher education. Melbourne's suburban sprawl promotes private car travel. In 1980 Melbourne contained more than 28,000 retail establishments and 4200 restaurants and hotels. Industry accounts for 30% of employment, and services account for another 30%. Its largest industries are motor vehicles, clothing, and footware. Although unemployment reached 10% after the 1973 energy crisis, by 1985 it was down to 6%.

  1. Geothermal prospection in the Greater Geneva Basin (Switzerland and France): Structural and reservoir quality assessment (United States)

    Rusillon, Elme; Clerc, Nicolas; Makhloufi, Yasin; Brentini, Maud; Moscariello, Andrea


    A reservoir assessment was performed in the Greater Geneva Basin to evaluate the geothermal resources potential of low to medium enthalpy (Moscariello, 2016). For this purpose, a detail structural analysis of the basin was performed (Clerc et al., 2016) simultaneously with a reservoir appraisal study including petrophysical properties assessment in a consistent sedimentological and stratigraphical frame (Brentini et al., 2017). This multi-disciplinary study was organised in 4 steps: (1) investigation of the surrounding outcrops to understand the stratigraphy and lateral facies distribution of the sedimentary sequence from Permo-Carboniferous to Lower Cretaceous units; (2) development of 3D geological models derived from 2D seismic and well data focusing on the structural scheme of the basin to constrain better the tectonic influence on facies distribution and to assess potential hydraulic connectivity through faults between reservoir units ; (3) evaluation of the distribution, geometry, sedimentology and petrophysical properties of potential reservoir units from well data; (4) identification and selection of the most promising reservoir units for in-depth rock type characterization and 3D modeling. Petrophysical investigations revealed that the Kimmeridgian-Tithonian Reef Complex and the underlying Calcaires de Tabalcon units are the most promising geothermal reservoir targets (porosity range 10-20%; permeability to 1mD). Best reservoir properties are measured in patch reefs and high-energy peri-reefal depositional environments, which are surrounded by synchronous tight lagoonal deposits. Associated highly porous dolomitized intervals reported in the western part of the basin also provide enhanced reservoir quality. The distribution and geometry of best reservoir bodies is complex and constrained by (1) palaeotopography, which can be affected by synsedimentary fault activity during Mesozoic times, (2) sedimentary factors such as hydrodynamics, sea level variations

  2. Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics. (United States)

    Harvey, Michael G; Smith, Brian Tilston; Glenn, Travis C; Faircloth, Brant C; Brumfield, Robb T


    historical processes across biotas. We argue that sequence capture should be given greater attention as a method of obtaining data for studies in shallow systematics and comparative phylogeography. © The Author(s) 2016. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email:

  3. Short sequence motifs, overrepresented in mammalian conservednon-coding sequences

    Energy Technology Data Exchange (ETDEWEB)

    Minovitsky, Simon; Stegmaier, Philip; Kel, Alexander; Kondrashov,Alexey S.; Dubchak, Inna


    Background: A substantial fraction of non-coding DNAsequences of multicellular eukaryotes is under selective constraint. Inparticular, ~;5 percent of the human genome consists of conservednon-coding sequences (CNSs). CNSs differ from other genomic sequences intheir nucleotide composition and must play important functional roles,which mostly remain obscure.Results: We investigated relative abundancesof short sequence motifs in all human CNSs present in the human/mousewhole-genome alignments vs. three background sets of sequences: (i)weakly conserved or unconserved non-coding sequences (non-CNSs); (ii)near-promoter sequences (located between nucleotides -500 and -1500,relative to a start of transcription); and (iii) random sequences withthe same nucleotide composition as that of CNSs. When compared tonon-CNSs and near-promoter sequences, CNSs possess an excess of AT-richmotifs, often containing runs of identical nucleotides. In contrast, whencompared to random sequences, CNSs contain an excess of GC-rich motifswhich, however, lack CpG dinucleotides. Thus, abundance of short sequencemotifs in human CNSs, taken as a whole, is mostly determined by theiroverall compositional properties and not by overrepresentation of anyspecific short motifs. These properties are: (i) high AT-content of CNSs,(ii) a tendency, probably due to context-dependent mutation, of A's andT's to clump, (iii) presence of short GC-rich regions, and (iv) avoidanceof CpG contexts, due to their hypermutability. Only a small number ofshort motifs, overrepresented in all human CNSs are similar to bindingsites of transcription factors from the FOX family.Conclusion: Human CNSsas a whole appear to be too broad a class of sequences to possess strongfootprints of any short sequence-specific functions. Such footprintsshould be studied at the level of functional subclasses of CNSs, such asthose which flank genes with a particular pattern of expression. Overallproperties of CNSs are affected by

  4. Genomic sequencing in clinical trials


    Mestan, Karen K; Ilkhanoff, Leonard; Mouli, Samdeep; Lin, Simon


    Abstract Human genome sequencing is the process by which the exact order of nucleic acid base pairs in the 24 human chromosomes is determined. Since the completion of the Human Genome Project in 2003, genomic sequencing is rapidly becoming a major part of our translational research efforts to understand and improve human health and disease. This article reviews the current and future directions of clinical research with respect to genomic sequencing, a technology that is just beginning to fin...

  5. Biosensors for DNA sequence detection (United States)

    Vercoutere, Wenonah; Akeson, Mark


    DNA biosensors are being developed as alternatives to conventional DNA microarrays. These devices couple signal transduction directly to sequence recognition. Some of the most sensitive and functional technologies use fibre optics or electrochemical sensors in combination with DNA hybridization. In a shift from sequence recognition by hybridization, two emerging single-molecule techniques read sequence composition using zero-mode waveguides or electrical impedance in nanoscale pores.

  6. Irreducible Tests for Space Mission Sequencing Software (United States)

    Ferguson, Lisa


    As missions extend further into space, the modeling and simulation of their every action and instruction becomes critical. The greater the distance between Earth and the spacecraft, the smaller the window for communication becomes. Therefore, through modeling and simulating the planned operations, the most efficient sequence of commands can be sent to the spacecraft. The Space Mission Sequencing Software is being developed as the next generation of sequencing software to ensure the most efficient communication to interplanetary and deep space mission spacecraft. Aside from efficiency, the software also checks to make sure that communication during a specified time is even possible, meaning that there is not a planet or moon preventing reception of a signal from Earth or that two opposing commands are being given simultaneously. In this way, the software not only models the proposed instructions to the spacecraft, but also validates the commands as well.To ensure that all spacecraft communications are sequenced properly, a timeline is used to structure the data. The created timelines are immutable and once data is as-signed to a timeline, it shall never be deleted nor renamed. This is to prevent the need for storing and filing the timelines for use by other programs. Several types of timelines can be created to accommodate different types of communications (activities, measurements, commands, states, events). Each of these timeline types requires specific parameters and all have options for additional parameters if needed. With so many combinations of parameters available, the robustness and stability of the software is a necessity. Therefore a baseline must be established to ensure the full functionality of the software and it is here where the irreducible tests come into use.

  7. Comparison of illumina and 454 deep sequencing in participants failing raltegravir-based antiretroviral therapy.

    Directory of Open Access Journals (Sweden)

    Jonathan Z Li

    Full Text Available The impact of raltegravir-resistant HIV-1 minority variants (MVs on raltegravir treatment failure is unknown. Illumina sequencing offers greater throughput than 454, but sequence analysis tools for viral sequencing are needed. We evaluated Illumina and 454 for the detection of HIV-1 raltegravir-resistant MVs.A5262 was a single-arm study of raltegravir and darunavir/ritonavir in treatment-naïve patients. Pre-treatment plasma was obtained from 5 participants with raltegravir resistance at the time of virologic failure. A control library was created by pooling integrase clones at predefined proportions. Multiplexed sequencing was performed with Illumina and 454 platforms at comparable costs. Illumina sequence analysis was performed with the novel snp-assess tool and 454 sequencing was analyzed with V-Phaser.Illumina sequencing resulted in significantly higher sequence coverage and a 0.095% limit of detection. Illumina accurately detected all MVs in the control library at ≥0.5% and 7/10 MVs expected at 0.1%. 454 sequencing failed to detect any MVs at 0.1% with 5 false positive calls. For MVs detected in the patient samples by both 454 and Illumina, the correlation in the detected variant frequencies was high (R2 = 0.92, P<0.001. Illumina sequencing detected 2.4-fold greater nucleotide MVs and 2.9-fold greater amino acid MVs compared to 454. The only raltegravir-resistant MV detected was an E138K mutation in one participant by Illumina sequencing, but not by 454.In participants of A5262 with raltegravir resistance at virologic failure, baseline raltegravir-resistant MVs were rarely detected. At comparable costs to 454 sequencing, Illumina demonstrated greater depth of coverage, increased sensitivity for detecting HIV MVs, and fewer false positive variant calls.

  8. ABS: Sequence alignment by scanning

    KAUST Repository

    Bonny, Mohamed Talal


    Sequence alignment is an essential tool in almost any computational biology research. It processes large database sequences and considered to be high consumers of computation time. Heuristic algorithms are used to get approximate but fast results. We introduce fast alignment algorithm, called Alignment By Scanning (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the well-known alignment algorithms, the FASTA (which is heuristic) and the \\'Needleman-Wunsch\\' (which is optimal). The proposed algorithm achieves up to 76% enhancement in alignment score when it is compared with the FASTA Algorithm. The evaluations are conducted using different lengths of DNA sequences. © 2011 IEEE.

  9. ABS: Sequence alignment by scanning

    KAUST Repository

    Bonny, Mohamed Talal; Salama, Khaled N.


    Sequence alignment is an essential tool in almost any computational biology research. It processes large database sequences and considered to be high consumers of computation time. Heuristic algorithms are used to get approximate but fast results. We introduce fast alignment algorithm, called Alignment By Scanning (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the well-known alignment algorithms, the FASTA (which is heuristic) and the 'Needleman-Wunsch' (which is optimal). The proposed algorithm achieves up to 76% enhancement in alignment score when it is compared with the FASTA Algorithm. The evaluations are conducted using different lengths of DNA sequences. © 2011 IEEE.

  10. Fast global sequence alignment technique

    KAUST Repository

    Bonny, Mohamed Talal


    Bioinformatics database is growing exponentially in size. Processing these large amount of data may take hours of time even if super computers are used. One of the most important processing tool in Bioinformatics is sequence alignment. We introduce fast alignment algorithm, called \\'Alignment By Scanning\\' (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the wellknown sequence alignment algorithms, the \\'GAP\\' (which is heuristic) and the \\'Needleman-Wunsch\\' (which is optimal). The proposed algorithm achieves up to 51% enhancement in alignment score when it is compared with the GAP Algorithm. The evaluations are conducted using different lengths of DNA sequences. © 2011 IEEE.

  11. Hierarchical spatial genetic structure in a distinct population segment of greater sage-grouse (United States)

    Oyler-McCance, Sara J.; Casazza, Michael L.; Fike, Jennifer A.; Coates, Peter S.


    Greater sage-grouse (Centrocercus urophasianus) within the Bi-State Management Zone (area along the border between Nevada and California) are geographically isolated on the southwestern edge of the species’ range. Previous research demonstrated that this population is genetically unique, with a high proportion of unique mitochondrial DNA (mtDNA) haplotypes and with significant differences in microsatellite allele frequencies compared to populations across the species’ range. As a result, this population was considered a distinct population segment (DPS) and was recently proposed for listing as threatened under the U.S. Endangered Species Act. A more comprehensive understanding of the boundaries of this genetically unique population (where the Bi-State population begins) and an examination of genetic structure within the Bi-State is needed to help guide effective management decisions. We collected DNA from eight sampling locales within the Bi-State (N = 181) and compared those samples to previously collected DNA from the two most proximal populations outside of the Bi-State DPS, generating mtDNA sequence data and amplifying 15 nuclear microsatellites. Both mtDNA and microsatellite analyses support the idea that the Bi-State DPS represents a genetically unique population, which has likely been separated for thousands of years. Seven mtDNA haplotypes were found exclusively in the Bi-State population and represented 73 % of individuals, while three haplotypes were shared with neighboring populations. In the microsatellite analyses both STRUCTURE and FCA separate the Bi-State from the neighboring populations. We also found genetic structure within the Bi-State as both types of data revealed differences between the northern and southern part of the Bi-State and there was evidence of isolation-by-distance. STRUCTURE revealed three subpopulations within the Bi-State consisting of the northern Pine Nut Mountains (PNa), mid Bi-State, and White Mountains (WM) following a

  12. Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria

    DEFF Research Database (Denmark)

    Larsen, Mette Voldby; Cosentino, Salvatore; Rasmussen, Simon


    Accurate strain identification is essential for anyone working with bacteria. For many species, multilocus sequence typing (MLST) is considered the "gold standard" of typing, but it is traditionally performed in an expensive and time-consuming manner. As the costs of whole-genome sequencing (WGS...

  13. Dog Y chromosomal DNA sequence: identification, sequencing and SNP discovery

    Directory of Open Access Journals (Sweden)

    Kirkness Ewen


    Full Text Available Abstract Background Population genetic studies of dogs have so far mainly been based on analysis of mitochondrial DNA, describing only the history of female dogs. To get a picture of the male history, as well as a second independent marker, there is a need for studies of biallelic Y-chromosome polymorphisms. However, there are no biallelic polymorphisms reported, and only 3200 bp of non-repetitive dog Y-chromosome sequence deposited in GenBank, necessitating the identification of dog Y chromosome sequence and the search for polymorphisms therein. The genome has been only partially sequenced for one male dog, disallowing mapping of the sequence into specific chromosomes. However, by comparing the male genome sequence to the complete female dog genome sequence, candidate Y-chromosome sequence may be identified by exclusion. Results The male dog genome sequence was analysed by Blast search against the human genome to identify sequences with a best match to the human Y chromosome and to the female dog genome to identify those absent in the female genome. Candidate sequences were then tested for male specificity by PCR of five male and five female dogs. 32 sequences from the male genome, with a total length of 24 kbp, were identified as male specific, based on a match to the human Y chromosome, absence in the female dog genome and male specific PCR results. 14437 bp were then sequenced for 10 male dogs originating from Europe, Southwest Asia, Siberia, East Asia, Africa and America. Nine haplotypes were found, which were defined by 14 substitutions. The genetic distance between the haplotypes indicates that they originate from at least five wolf haplotypes. There was no obvious trend in the geographic distribution of the haplotypes. Conclusion We have identified 24159 bp of dog Y-chromosome sequence to be used for population genetic studies. We sequenced 14437 bp in a worldwide collection of dogs, identifying 14 SNPs for future SNP analyses, and

  14. SVX Sequencer Board

    International Nuclear Information System (INIS)

    Utes, M.


    The SVX Sequencer boards are 9U by 280mm circuit boards that reside in slots 2 through 21 of each of eight Eurocard crates in the D0 Detector Platform. The basic purpose is to control the SVX chips for data acquisition and when a trigger occurs, to gather the SVX data and relay the data to the VRB boards in the Movable Counting House. Functions and features are as follows: (1) Initialization of eight SVX chip strings using the MIL-STD-1553 data bus; (2) Real time manipulation of the SVX control lines to effect data acquisition, digitization, and readout based on the NRZ/Clock signals from the Controller; (3) Conversion of 8-bit electrical SVX readout data to an optical signal operating at 1.062 Gbit/sec, sent to the VRB. Eight HDIs will be serviced per board; (4) Built-in logic analyzer which can record the most important control and data lines during a data acquisition cycle and put this recorded information onto the 1553 bus; (5) Identification header and end of data trailer tacked onto data stream; (6) 1553 register which can read the current values of the control and data lines; (7) 1553 register which can test the optical link; (8) 1553 registers for crossing pulse width, calibration pulse voltage, and calibration pipeline select; (9) 1553 register for reading the optical drivers status link; (10) 1553 register for power control of SVX chips and ignoring bad SVX strings; (11) Front panel displays and LEDs show the board status at a glance; (12) In-system programmable EPLDs are programmed via 1553 or Altera's 'Bitblaster'; (13) Automatic readout abort after 45us; (14) Supplies BUSY signal back to Trigger Framework; (15) Supports a heartbeat system to prevent excessive SVX current draw; and (16) Supports a SVX power trip feature if heartbeat failure occurs.

  15. Sequence Algebra, Sequence Decision Diagrams and Dynamic Fault Trees

    International Nuclear Information System (INIS)

    Rauzy, Antoine B.


    A large attention has been focused on the Dynamic Fault Trees in the past few years. By adding new gates to static (regular) Fault Trees, Dynamic Fault Trees aim to take into account dependencies among events. Merle et al. proposed recently an algebraic framework to give a formal interpretation to these gates. In this article, we extend Merle et al.'s work by adopting a slightly different perspective. We introduce Sequence Algebras that can be seen as Algebras of Basic Events, representing failures of non-repairable components. We show how to interpret Dynamic Fault Trees within this framework. Finally, we propose a new data structure to encode sets of sequences of Basic Events: Sequence Decision Diagrams. Sequence Decision Diagrams are very much inspired from Minato's Zero-Suppressed Binary Decision Diagrams. We show that all operations of Sequence Algebras can be performed on this data structure.

  16. Eimeria spp. infecting quenda (Isoodon obesulus) in the greater Perth region, Western Australia. (United States)

    Hillman, Alison E; Yang, Rongchang; Lymbery, Alan J; Thompson, R C Andrew


    Parasites of wildlife inhabiting urbanised and peri-urban environments are of interest regarding wildlife population health, and also veterinary public health in the case of parasites that can also infect humans and domestic animals. This study aimed to: identify, and estimate the prevalence of, species of Eimeria parasitic in quenda (Isoodon obesulus) in the greater Perth region, Western Australia; 2) morphologically describe and genetically characterise a novel observed species of Eimeria as E. angustus; and 3) genetically characterise E. kanyana. Eimeria spp. prevalence was 76.1% (95% CI 64.9-84.5%), and four putative species of Eimeria were identified. Eimeria kanyana was identified infecting quenda for the first time, with a prevalence of 54.9% (43.4-66.0%). Eimeria quenda was less prevalent, at 7.0% (3.1-15.5%). The novel species E. angustus was present in 45.1% of sampled quenda (34.0-56.6%). A second novel morphotype of Eimeria was present in 2.8% of sampled quenda (0.9-9.7%). Mixed Eimeria spp. infections were present in 21/71 quenda (29.6%, 95% CI 20.2-41.1%). Molecular phylogenetic analyses of E. kanyana and E. angustus were conducted at the 18S rRNA and mitochondrial cytochrome oxidase loci. At both loci, two isolates identified as E. kanyana grouped in a phylogenetic clade with E. trichosuri. Five isolates identified as the novel E. angustus were most closely related to E. tropidura at the 18S locus. At the COI locus, no sequence data were available for E. tropidura; isolates of E. angustus grouped with E. sciurorum. Copyright © 2016 Elsevier Inc. All rights reserved.

  17. Sex-biased gene flow among elk in the greater Yellowstone ecosystem (United States)

    Hand, Brian K.; Chen, Shanyuan; Anderson, Neil; Beja-Pereira, Albano; Cross, Paul C.; Ebinger, Michael R.; Edwards