Chinese Unknown Word Recognition for PCFG-LA Parsing

Directory of Open Access Journals (Sweden)

Qiuping Huang

2014-01-01

Full Text Available This paper investigates the recognition of unknown words in Chinese parsing. Two methods are proposed to handle this problem. One is the modification of a character-based model. We model the emission probability of an unknown word using the first and last characters in the word. It aims to reduce the POS tag ambiguities of unknown words to improve the parsing performance. In addition, a novel method, using graph-based semisupervised learning (SSL, is proposed to improve the syntax parsing of unknown words. Its goal is to discover additional lexical knowledge from a large amount of unlabeled data to help the syntax parsing. The method is mainly to propagate lexical emission probabilities to unknown words by building the similarity graphs over the words of labeled and unlabeled data. The derived distributions are incorporated into the parsing process. The proposed methods are effective in dealing with the unknown words to improve the parsing. Empirical results for Penn Chinese Treebank and TCT Treebank revealed its effectiveness.

Image portion identification methods, image parsing methods, image parsing systems, and articles of manufacture

Science.gov (United States)

Lassahn, Gordon D.; Lancaster, Gregory D.; Apel, William A.; Thompson, Vicki S.

2013-01-08

Image portion identification methods, image parsing methods, image parsing systems, and articles of manufacture are described. According to one embodiment, an image portion identification method includes accessing data regarding an image depicting a plurality of biological substrates corresponding to at least one biological sample and indicating presence of at least one biological indicator within the biological sample and, using processing circuitry, automatically identifying a portion of the image depicting one of the biological substrates but not others of the biological substrates.

Balancing geo-privacy and spatial patterns in epidemiological studies

Directory of Open Access Journals (Sweden)

Chien-Chou Chen

2017-11-01

Full Text Available To balance the protection of geo-privacy and the accuracy of spatial patterns, we developed a geo-spatial tool (GeoMasker intended to mask the residential locations of patients or cases in a geographic information system (GIS. To elucidate the effects of geo-masking parameters, we applied 2010 dengue epidemic data from Taiwan testing the tool’s performance in an empirical situation. The similarity of pre- and post-spatial patterns was measured by D statistics under a 95% confidence interval. In the empirical study, different magnitudes of anonymisation (estimated Kanonymity ≥10 and 100 were achieved and different degrees of agreement on the pre- and post-patterns were evaluated. The application is beneficial for public health workers and researchers when processing data with individuals’ spatial information.

From LL-regular to LL(1) grammars: Transformations, covers and parsing

NARCIS (Netherlands)

Nijholt, Antinus

1982-01-01

In this paper it is shown that it is possible to transform any LL-regular grammar G into an LL(1) grammar G' in such a way that parsing G' is as good as parsing G. That is, a parse of a sentence of grammar G can be obtained with a simple string homomorphism from the parse of a corresponding sentence

Context-free parsing with connectionist networks

Science.gov (United States)

Fanty, M. A.

1986-08-01

This paper presents a simple algorithm which converts any context-free grammar into a connectionist network which parses strings (of arbitrary but fixed maximum length) in the language defined by that grammar. The network is fast, O(n), and deterministicd. It consists of binary units which compute a simple function of their input. When the grammar is put in Chomsky normal form, O(n3) units needed to parse inputs of length up to n.

On Parsing CHILDES

OpenAIRE

Laakso, Aarre

2005-01-01

Research on child language acquisition would benefit from the availability of a large body of syntactically parsed utterances between parents and children. We consider the problem of generating such a ``treebank'' from the CHILDES corpus, which currently contains primarily orthographically transcribed speech tagged for lexical category.

Dual decomposition for parsing with non-projective head automata

OpenAIRE

Koo, Terry; Rush, Alexander Matthew; Collins, Michael; Jaakkola, Tommi S.; Sontag, David Alexander

2010-01-01

This paper introduces algorithms for non-projective parsing based on dual decomposition. We focus on parsing algorithms for non-projective head automata, a generalization of head-automata models to non-projective structures. The dual decomposition algorithms are simple and efficient, relying on standard dynamic programming and minimum spanning tree algorithms. They provably solve an LP relaxation of the non-projective parsing problem. Empirically the LP relaxation is very often tight: for man...

A structural SVM approach for reference parsing.

Science.gov (United States)

Zhang, Xiaoli; Zou, Jie; Le, Daniel X; Thoma, George R

2011-06-09

Automated extraction of bibliographic data, such as article titles, author names, abstracts, and references is essential to the affordable creation of large citation databases. References, typically appearing at the end of journal articles, can also provide valuable information for extracting other bibliographic data. Therefore, parsing individual reference to extract author, title, journal, year, etc. is sometimes a necessary preprocessing step in building citation-indexing systems. The regular structure in references enables us to consider reference parsing a sequence learning problem and to study structural Support Vector Machine (structural SVM), a newly developed structured learning algorithm on parsing references. In this study, we implemented structural SVM and used two types of contextual features to compare structural SVM with conventional SVM. Both methods achieve above 98% token classification accuracy and above 95% overall chunk-level accuracy for reference parsing. We also compared SVM and structural SVM to Conditional Random Field (CRF). The experimental results show that structural SVM and CRF achieve similar accuracies at token- and chunk-levels. When only basic observation features are used for each token, structural SVM achieves higher performance compared to SVM since it utilizes the contextual label features. However, when the contextual observation features from neighboring tokens are combined, SVM performance improves greatly, and is close to that of structural SVM after adding the second order contextual observation features. The comparison of these two methods with CRF using the same set of binary features show that both structural SVM and CRF perform better than SVM, indicating their stronger sequence learning ability in reference parsing.

Behavioral Responses to Epidemics in an Online Experiment: Using Virtual Diseases to Study Human Behavior

Science.gov (United States)

Chen, Frederick; Griffith, Amanda; Cottrell, Allin; Wong, Yue-Ling

2013-01-01

We report the results of a study we conducted using a simple multiplayer online game that simulates the spread of an infectious disease through a population composed of the players. We use our virtual epidemics game to examine how people respond to epidemics. The analysis shows that people's behavior is responsive to the cost of self-protection, the reported prevalence of disease, and their experiences earlier in the epidemic. Specifically, decreasing the cost of self-protection increases the rate of safe behavior. Higher reported prevalence also raises the likelihood that individuals would engage in self-protection, where the magnitude of this effect depends on how much time has elapsed in the epidemic. Individuals' experiences in terms of how often an infection was acquired when they did not engage in self-protection are another factor that determines whether they will invest in preventive measures later on. All else being equal, individuals who were infected at a higher rate are more likely to engage in self-protective behavior compared to those with a lower rate of infection. Lastly, fixing everything else, people's willingness to engage in safe behavior waxes or wanes over time, depending on the severity of an epidemic: when prevalence is high, people are more likely to adopt self-protective measures as time goes by; when prevalence is low, a ‘self-protection fatigue’ effect sets in whereby individuals are less willing to engage in safe behavior over time. PMID:23326360

GeoDash: Assisting Visual Image Interpretation in Collect Earth Online by Leveraging Big Data on Google Earth Engine

Science.gov (United States)

Markert, K. N.; Ashmall, W.; Johnson, G.; Saah, D. S.; Anderson, E.; Flores Cordova, A. I.; Díaz, A. S. P.; Mollicone, D.; Griffin, R.

2017-12-01

Collect Earth Online (CEO) is a free and open online implementation of the FAO Collect Earth system for collaboratively collecting environmental data through the visual interpretation of Earth observation imagery. The primary collection mechanism in CEO is human interpretation of land surface characteristics in imagery served via Web Map Services (WMS). However, interpreters may not have enough contextual information to classify samples by only viewing the imagery served via WMS, be they high resolution or otherwise. To assist in the interpretation and collection processes in CEO, SERVIR, a joint NASA-USAID initiative that brings Earth observations to improve environmental decision making in developing countries, developed the GeoDash system, an embedded and critical component of CEO. GeoDash leverages Google Earth Engine (GEE) by allowing users to set up custom browser-based widgets that pull from GEE's massive public data catalog. These widgets can be quick looks of other satellite imagery, time series graphs of environmental variables, and statistics panels of the same. Users can customize widgets with any of GEE's image collections, such as the historical Landsat collection with data available since the 1970s, select date ranges, image stretch parameters, graph characteristics, and create custom layouts, all on-the-fly to support plot interpretation in CEO. This presentation focuses on the implementation and potential applications, including the back-end links to GEE and the user interface with custom widget building. GeoDash takes large data volumes and condenses them into meaningful, relevant information for interpreters. While designed initially with national and global forest resource assessments in mind, the system will complement disaster assessments, agriculture management, project monitoring and evaluation, and more.

GeoDash: Assisting Visual Image Interpretation in Collect Earth Online by Leveraging Big Data on Google Earth Engine

Science.gov (United States)

Markert, Kel; Ashmall, William; Johnson, Gary; Saah, David; Mollicone, Danilo; Diaz, Alfonso Sanchez-Paus; Anderson, Eric; Flores, Africa; Griffin, Robert

2017-01-01

Collect Earth Online (CEO) is a free and open online implementation of the FAO Collect Earth system for collaboratively collecting environmental data through the visual interpretation of Earth observation imagery. The primary collection mechanism in CEO is human interpretation of land surface characteristics in imagery served via Web Map Services (WMS). However, interpreters may not have enough contextual information to classify samples by only viewing the imagery served via WMS, be they high resolution or otherwise. To assist in the interpretation and collection processes in CEO, SERVIR, a joint NASA-USAID initiative that brings Earth observations to improve environmental decision making in developing countries, developed the GeoDash system, an embedded and critical component of CEO. GeoDash leverages Google Earth Engine (GEE) by allowing users to set up custom browser-based widgets that pull from GEE's massive public data catalog. These widgets can be quick looks of other satellite imagery, time series graphs of environmental variables, and statistics panels of the same. Users can customize widgets with any of GEE's image collections, such as the historical Landsat collection with data available since the 1970s, select date ranges, image stretch parameters, graph characteristics, and create custom layouts, all on-the-fly to support plot interpretation in CEO. This presentation focuses on the implementation and potential applications, including the back-end links to GEE and the user interface with custom widget building. GeoDash takes large data volumes and condenses them into meaningful, relevant information for interpreters. While designed initially with national and global forest resource assessments in mind, the system will complement disaster assessments, agriculture management, project monitoring and evaluation, and more.

Faster Scannerless GLR parsing

NARCIS (Netherlands)

J.J. Vinju (Jurgen); G.R. Economopoulos (Giorgos Robert); P. Klint (Paul)

2008-01-01

textabstractAnalysis and renovation of large software portfolios requires syntax analysis of multiple, usually embedded, languages and this is beyond the capabilities of many standard parsing techniques. The traditional separation between lexer and parser falls short due to the limitations of

Faster scannerless GLR parsing

NARCIS (Netherlands)

G.R. Economopoulos (Giorgos Robert); P. Klint (Paul); J.J. Vinju (Jurgen); O. de Moor; M.I. Schwartzbach

2009-01-01

textabstractAnalysis and renovation of large software portfolios requires syntax analysis of multiple, usually embedded, languages and this is beyond the capabilities of many standard parsing techniques. The traditional separation between lexer and parser falls short due to the limitations of

Comparative Analysis of NOAA REFM and SNB3GEO Tools for the Forecast of the Fluxes of High-Energy Electrons at GEO

Science.gov (United States)

Balikhin, M. A.; Rodriguez, J. V.; Boynton, R. J.; Walker, S. N.; Aryan, Homayon; Sibeck, D. G.; Billings, S. A.

2016-01-01

Reliable forecasts of relativistic electrons at geostationary orbit (GEO) are important for the mitigation of their hazardous effects on spacecraft at GEO. For a number of years the Space Weather Prediction Center at NOAA has provided advanced online forecasts of the fluence of electrons with energy >2 MeV at GEO using the Relativistic Electron Forecast Model (REFM). The REFM forecasts are based on real-time solar wind speed observations at L1. The high reliability of this forecasting tool serves as a benchmark for the assessment of other forecasting tools. Since 2012 the Sheffield SNB3GEO model has been operating online, providing a 24 h ahead forecast of the same fluxes. In addition to solar wind speed, the SNB3GEO forecasts use solar wind density and interplanetary magnetic field B(sub z) observations at L1. The period of joint operation of both of these forecasts has been used to compare their accuracy. Daily averaged measurements of electron fluxes by GOES 13 have been used to estimate the prediction efficiency of both forecasting tools. To assess the reliability of both models to forecast infrequent events of very high fluxes, the Heidke skill score was employed. The results obtained indicate that SNB3GEO provides a more accurate 1 day ahead forecast when compared to REFM. It is shown that the correction methodology utilized by REFM potentially can improve the SNB3GEO forecast.

Comparative analysis of NOAA REFM and SNB3GEO tools for the forecast of the fluxes of high-energy electrons at GEO

Science.gov (United States)

Balikhin, M. A.; Rodriguez, J. V.; Boynton, R. J.; Walker, S. N.; Aryan, H.; Sibeck, D. G.; Billings, S. A.

2016-01-01

Reliable forecasts of relativistic electrons at geostationary orbit (GEO) are important for the mitigation of their hazardous effects on spacecraft at GEO. For a number of years the Space Weather Prediction Center at NOAA has provided advanced online forecasts of the fluence of electrons with energy >2 MeV at GEO using the Relativistic Electron Forecast Model (REFM). The REFM forecasts are based on real-time solar wind speed observations at L1. The high reliability of this forecasting tool serves as a benchmark for the assessment of other forecasting tools. Since 2012 the Sheffield SNB3GEO model has been operating online, providing a 24 h ahead forecast of the same fluxes. In addition to solar wind speed, the SNB3GEO forecasts use solar wind density and interplanetary magnetic field Bz observations at L1.The period of joint operation of both of these forecasts has been used to compare their accuracy. Daily averaged measurements of electron fluxes by GOES 13 have been used to estimate the prediction efficiency of both forecasting tools. To assess the reliability of both models to forecast infrequent events of very high fluxes, the Heidke skill score was employed. The results obtained indicate that SNB3GEO provides a more accurate 1 day ahead forecast when compared to REFM. It is shown that the correction methodology utilized by REFM potentially can improve the SNB3GEO forecast.

Probabilistic lexical generalization for French dependency parsing

OpenAIRE

Henestroza Anguiano , Enrique; Candito , Marie

2012-01-01

International audience; This paper investigates the impact on French dependency parsing of lexical generalization methods beyond lemmatization and morphological analysis. A distributional thesaurus is created from a large text corpus and used for distributional clustering and WordNet automatic sense ranking. The standard approach for lexical generalization in parsing is to map a word to a single generalized class, either replacing the word with the class or adding a new feature for the class....

Outbreak or Epidemic? How Obama's Language Choice Transformed the Ebola Outbreak Into an Epidemic.

Science.gov (United States)

Gesser-Edelsburg, Anat; Shir-Raz, Yaffa; Bar-Lev, Oshrat Sassoni; James, James J; Green, Manfred S

2016-08-01

Our aim was to examine in what terms leading newspapers' online sites described the current Ebola crisis. We employed a quantitative content analysis of terms attributed to Ebola. We found and analyzed 582 articles published between March 23 and September 30, 2014, on the online websites of 3 newspapers: The New York Times, Daily Mail, and Ynet. Our theoretical framework drew from the fields of health communication and emerging infectious disease communication, including such concepts as framing media literacy, risk signatures, and mental models. We found that outbreak and epidemic were used interchangeably in the articles. From September 16, 2014, onward, epidemic predominated, corresponding to when President Barack Obama explicitly referred to Ebola as an epidemic. Prior to Obama's speech, 86.8% of the articles (323) used the term outbreak and only 8.6% (32) used the term epidemic. Subsequently, both terms were used almost the same amount: 53.8% of the articles (113) used the term outbreak and 53.3% (112) used the term epidemic. Effective communication is crucial during public health emergencies such as Ebola, because language framing affects the decision-making process of social judgments and actions. The choice of one term (outbreak) over another (epidemic) can create different conceptualizations of the disease, thereby influencing the risk signature. (Disaster Med Public Health Preparedness. 2016;10:669-673).

Faster scannerless GLR parsing

NARCIS (Netherlands)

Economopoulos, G.R.; Klint, P.; Vinju, J.J.; Moor, de O.; Schwartzbach, M.I.

2009-01-01

Analysis and renovation of large software portfolios requires syntax analysis of multiple, usually embedded, languages and this is beyond the capabilities of many standard parsing techniques. The traditional separation between lexer and parser falls short due to the limitations of tokenization based

The development of a massive open online course during the 2014-15 Ebola virus disease epidemic.

Science.gov (United States)

Evans, Dabney P; Luffy, Samantha M; Parisi, Stephanie; Del Rio, Carlos

2017-09-01

Timely training was urgently needed at the onset of the 2014 Ebola virus disease epidemic. Massive open online courses (MOOCs) have grown in popularity, though little is known about their utility in time-sensitive situations, including infectious disease outbreaks. We created the first English language massive open online course on Ebola virus disease. Designed by a team representing various units of Emory University and six partner institutions, the six module course was aimed at a global general audience but also relevant for health care professionals. Over 7,000 learners from 170 countries participated in the initial course offering. More than a third of learners were from emerging economies, including seven percent from Africa, and another 13% from countries outside the United States who received individuals requiring treatment for Ebola virus disease. Creating and producing the first English language MOOC on EVD in a short time period required effective collaboration and strong coordination between subject matter and course development experts from Emory. Through these collaborative efforts, the development team was able to provide urgently needed training and educational materials while the epidemic of EVD continued to radiate through West Africa. Copyright © 2017 Elsevier Inc. All rights reserved.

Error Parsing: An alternative method of implementing social judgment theory

OpenAIRE

Crystal C. Hall; Daniel M. Oppenheimer

2015-01-01

We present a novel method of judgment analysis called Error Parsing, based upon an alternative method of implementing Social Judgment Theory (SJT). SJT and Error Parsing both posit the same three components of error in human judgment: error due to noise, error due to cue weighting, and error due to inconsistency. In that sense, the broad theory and framework are the same. However, SJT and Error Parsing were developed to answer different questions, and thus use different m...

Facilitating Geoscience Education in Higher-Education Institutes Worldwide With GeoBrain -- An Online Learning and Research Environment for Classroom Innovations

Science.gov (United States)

Deng, M.; di, L.

2006-12-01

Higher education in geosciences has imminent goals to prepare students with modern geoscience knowledge and skills to meet the increased demand on trained professionals for working on the big challenges faced by geoscience disciplines, such as the global environmental change, world energy supplies, sustainable development, etc. In order to reach the goal, the geoscience education in post-secondary institutes worldwide has to attract and retain enough students and to train students with knowledge and skills needed by the society. The classroom innovations that can encourage and support student investigations and research activities are key motivation mechanisms that help to reach the goal. This presentation describes the use of GeoBrain, an innovative geospatial knowledge system, as a powerful educating tool for motivating and facilitating innovative undergraduate and graduate teaching and research in geosciences. Developed in a NASA funded project, the GeoBrain system has adopted and implemented the latest Web services and knowledge management technologies for providing innovative methods in publishing, accessing, visualizing, and analyzing geospatial data and in building/sharing geoscience knowledge. It provides a data-rich online learning and research environment enabled by wealthy data and information available at NASA Earth Observing System (EOS) Data and Information System (EOSDIS). Students, faculty members, and researchers from institutes worldwide can easily access, analyze, and model with the huge amount of NASA EOS data just like they possess such vast resources locally at their desktops. The online environment provided by GeoBrain has brought significant positive changes to geosciences education in higher-education institutes because of its new concepts and technologies, motivation mechanisms, free exploration resources, and advanced geo- processing capabilities. With the system, the used-to-be very challenging or even impossible teaching tasks has

GeoSciGraph: An Ontological Framework for EarthCube Semantic Infrastructure

Science.gov (United States)

Gupta, A.; Schachne, A.; Condit, C.; Valentine, D.; Richard, S.; Zaslavsky, I.

2015-12-01

The CINERGI (Community Inventory of EarthCube Resources for Geosciences Interoperability) project compiles an inventory of a wide variety of earth science resources including documents, catalogs, vocabularies, data models, data services, process models, information repositories, domain-specific ontologies etc. developed by research groups and data practitioners. We have developed a multidisciplinary semantic framework called GeoSciGraph semantic ingration of earth science resources. An integrated ontology is constructed with Basic Formal Ontology (BFO) as its upper ontology and currently ingests multiple component ontologies including the SWEET ontology, GeoSciML's lithology ontology, Tematres controlled vocabulary server, GeoNames, GCMD vocabularies on equipment, platforms and institutions, software ontology, CUAHSI hydrology vocabulary, the environmental ontology (ENVO) and several more. These ontologies are connected through bridging axioms; GeoSciGraph identifies lexically close terms and creates equivalence class or subclass relationships between them after human verification. GeoSciGraph allows a community to create community-specific customizations of the integrated ontology. GeoSciGraph uses the Neo4J,a graph database that can hold several billion concepts and relationships. GeoSciGraph provides a number of REST services that can be called by other software modules like the CINERGI information augmentation pipeline. 1) Vocabulary services are used to find exact and approximate terms, term categories (community-provided clusters of terms e.g., measurement-related terms or environmental material related terms), synonyms, term definitions and annotations. 2) Lexical services are used for text parsing to find entities, which can then be included into the ontology by a domain expert. 3) Graph services provide the ability to perform traversal centric operations e.g., finding paths and neighborhoods which can be used to perform ontological operations like

Virtual plagues and real-world pandemics: reflecting on the potential for online computer role-playing games to inform real world epidemic research.

Science.gov (United States)

Oultram, Stuart

2013-12-01

In the wake of the Corrupted Blood incident, which afflicted the massively multiplayer online computer role-playing game World of Warcraft in 2005, it has been suggested that both, the incident itself and massively multiplayer online computer role-playing games in general, can be utilised to inform and assist real-world epidemic and public health research. In this paper, I engage critically with these claims.

Geospatial data sharing, online spatial analysis and processing of Indian Biodiversity data in Internet GIS domain - A case study for raster based online geo-processing

Science.gov (United States)

Karnatak, H.; Pandey, K.; Oberai, K.; Roy, A.; Joshi, D.; Singh, H.; Raju, P. L. N.; Krishna Murthy, Y. V. N.

2014-11-01

National Biodiversity Characterization at Landscape Level, a project jointly sponsored by Department of Biotechnology and Department of Space, was implemented to identify and map the potential biodiversity rich areas in India. This project has generated spatial information at three levels viz. Satellite based primary information (Vegetation Type map, spatial locations of road & village, Fire occurrence); geospatially derived or modelled information (Disturbance Index, Fragmentation, Biological Richness) and geospatially referenced field samples plots. The study provides information of high disturbance and high biological richness areas suggesting future management strategies and formulating action plans. The study has generated for the first time baseline database in India which will be a valuable input towards climate change study in the Indian Subcontinent. The spatial data generated during the study is organized as central data repository in Geo-RDBMS environment using PostgreSQL and POSTGIS. The raster and vector data is published as OGC WMS and WFS standard for development of web base geoinformation system using Service Oriented Architecture (SOA). The WMS and WFS based system allows geo-visualization, online query and map outputs generation based on user request and response. This is a typical mashup architecture based geo-information system which allows access to remote web services like ISRO Bhuvan, Openstreet map, Google map etc., with overlay on Biodiversity data for effective study on Bio-resources. The spatial queries and analysis with vector data is achieved through SQL queries on POSTGIS and WFS-T operations. But the most important challenge is to develop a system for online raster based geo-spatial analysis and processing based on user defined Area of Interest (AOI) for large raster data sets. The map data of this study contains approximately 20 GB of size for each data layer which are five in number. An attempt has been to develop system using

Documentation of Heritage Structures Through Geo-Crowdsourcing and Web-Mapping

Science.gov (United States)

Dhonju, H. K.; Xiao, W.; Shakya, B.; Mills, J. P.; Sarhosis, V.

2017-09-01

Heritage documentation has become increasingly urgent due to both natural impacts and human influences. The documentation of countless heritage sites around the globe is a massive project that requires significant amounts of financial and labour resources. With the concepts of volunteered geographic information (VGI) and citizen science, heritage data such as digital photographs can be collected through online crowd participation. Whilst photographs are not strictly geographic data, they can be geo-tagged by the participants. They can also be automatically geo-referenced into a global coordinate system if collected via mobile phones which are now ubiquitous. With the assistance of web-mapping, an online geo-crowdsourcing platform has been developed to collect and display heritage structure photographs. Details of platform development are presented in this paper. The prototype is demonstrated with several heritage examples. Potential applications and advancements are discussed.

Multi-User GeoGebra for Virtual Math Teams

Directory of Open Access Journals (Sweden)

Gerry Stahl

2010-05-01

Full Text Available The Math Forum is an online resource center for pre-algebra, algebra, geometry and pre-calculus. Its Virtual Math Teams (VMT service provides an integrated web-based environment for small teams to discuss mathematics. The VMT collaboration environment now includes the dynamic mathematics application, GeoGebra. It offers a multi-user version of GeoGebra, which can be used in concert with VMT’s chat, web browsers, curricula and wiki repository.

South African oil dependency : geo-political, geo-economic and geo-strategic considerations

OpenAIRE

2012-01-01

Ph.D. There is little research undertaken on the economic assessment of oil security of supply from the dimensions of geo-politics, geo-economics and geo-strategy. This study seeks to bridge the gap by providing new analytical and empirical work that captures the impact of geo-politics, geo-economics and geo-strategy on oil supply, consumption and price. This study is the first to define, analyse and contextualise the South African oil security of supply from a geo-political, geo-economic ...

Epidemic spreading on weighted complex networks

International Nuclear Information System (INIS)

Sun, Ye; Liu, Chuang; Zhang, Chu-Xu; Zhang, Zi-Ke

2014-01-01

Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role relations. In addition, we perform detailed analysis of two representative metrics, outbreak threshold and epidemic prevalence, on SIS and SIR models. Both theoretical and simulation results find good agreements with each other. Furthermore, experiments show that, on fully mixed networks, the weight distribution on edges would not affect the epidemic results once the average weight of whole network is fixed. This work may shed some light on the in-depth understanding of epidemic spreading on multi-relation and weighted networks.

Epidemic spreading on weighted complex networks

Energy Technology Data Exchange (ETDEWEB)

Sun, Ye [Institute of Information Economy, Hangzhou Normal University, Hangzhou 311121 (China); Alibaba Research Center of Complexity Science, Hangzhou Normal University, Hangzhou 311121 (China); Liu, Chuang, E-mail: liuchuang@hznu.edu.cn [Institute of Information Economy, Hangzhou Normal University, Hangzhou 311121 (China); Alibaba Research Center of Complexity Science, Hangzhou Normal University, Hangzhou 311121 (China); Zhang, Chu-Xu [Institute of Information Economy, Hangzhou Normal University, Hangzhou 311121 (China); Alibaba Research Center of Complexity Science, Hangzhou Normal University, Hangzhou 311121 (China); Zhang, Zi-Ke, E-mail: zhangzike@gmail.com [Institute of Information Economy, Hangzhou Normal University, Hangzhou 311121 (China); Alibaba Research Center of Complexity Science, Hangzhou Normal University, Hangzhou 311121 (China)

2014-01-31

Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role relations. In addition, we perform detailed analysis of two representative metrics, outbreak threshold and epidemic prevalence, on SIS and SIR models. Both theoretical and simulation results find good agreements with each other. Furthermore, experiments show that, on fully mixed networks, the weight distribution on edges would not affect the epidemic results once the average weight of whole network is fixed. This work may shed some light on the in-depth understanding of epidemic spreading on multi-relation and weighted networks.

Toward the Soundness of Sense Structure Definitions in Thesaurus-Dictionaries. Parsing Problems and Solutions

Directory of Open Access Journals (Sweden)

Neculai Curteanu

2012-10-01

Full Text Available In this paper we point out some difficult problems of thesaurus-dictionary entry parsing, relying on the parsing technology of SCD (Segmentation-Cohesion-Dependency configurations, successfully applied on six largest thesauri -- Romanian (2, French, German (2, and Russian. \\textbf{Challenging Problems:} \\textbf{(a}~Intricate and~/~or recursive structures of the lexicographic segments met in the entries of certain thesauri; \\textbf{(b}~Cyclicity (recursive calls of some sense marker classes on marker sequences; \\textbf{(c}~Establishing the hypergraph-driven dependencies between all the atomic and non-atomic sense definitions. Classical approach to solve these parsing problems is hard mainly because of depth-first search of sense definitions and markers, the substantial complexity of entries, and the sense tree dynamic construction embodied within these parsers. \\textbf{SCD-based Parsing Solutions:} \\textbf{(a}~The SCD parsing method is a procedural tool, completely formal grammar-free, handling the recursive structure of the lexicographic segments by procedural non-recursive calls performed on the SCD parsing configurations of the entry structure. \\textbf{(b}~For dealing with cyclicity (recursive calls between secondary sense markers and the sense enumeration markers, we proposed the Enumeration Closing Condition, sometimes coupled with New{\\_}Paragraphs typographic markers transformed into numeral sense enumeration. \\textbf{(c}~These problems, their lexicographic modeling and parsing solutions are addressed to both dictionary parser programmers to experience the SCD-based parsing method, as well as to lexicographers and thesauri designers for tailoring balanced lexical-semantics granularities and sounder sense tree definitions of the dictionary entries.

On Collocations and Their Interaction with Parsing and Translation

Directory of Open Access Journals (Sweden)

Violeta Seretan

2013-10-01

Full Text Available We address the problem of automatically processing collocations—a subclass of multi-word expressions characterized by a high degree of morphosyntactic flexibility—in the context of two major applications, namely, syntactic parsing and machine translation. We show that parsing and collocation identification are processes that are interrelated and that benefit from each other, inasmuch as syntactic information is crucial for acquiring collocations from corpora and, vice versa, collocational information can be used to improve parsing performance. Similarly, we focus on the interrelation between collocations and machine translation, highlighting the use of translation information for multilingual collocation identification, as well as the use of collocational knowledge for improving translation. We give a panorama of the existing relevant work, and we parallel the literature surveys with our own experiments involving a symbolic parser and a rule-based translation system. The results show a significant improvement over approaches in which the corresponding tasks are decoupled.

A Semantic Constraint on Syntactic Parsing.

Science.gov (United States)

Crain, Stephen; Coker, Pamela L.

This research examines how semantic information influences syntactic parsing decisions during sentence processing. In the first experiment, subjects were presented lexical strings having syntactically identical surface structures but with two possible underlying structures: "The children taught by the Berlitz method," and "The…

Parse Journal #2: Introduction

OpenAIRE

Bowman, Jason; Malik, Suhail; Phillips, Andrea

2015-01-01

As a periodical concerned with the critical potential of artistic research, this edition of the PARSE journal mobilises the multiple perspectives of artists, thinkers, critics and curators on the problematics, discontents and possibilities of private capital as an unregulated yet assumptive producer of art’s value, including its integration with state-funding. We have put emphasis on how this conditioning of art’s production, circulation, reception and sale can be put to task. In particular, ...

Cuidado de enfermagem a pessoas com hipertensão fundamentado na teoria de Parse Atención de enfermería a personas con hipertensión basada en la teoría de Parse Nursing care to people with hypertension based on Parse's theory

Directory of Open Access Journals (Sweden)

Fabíola Vládia Freire da Silva

2013-03-01

Full Text Available Este estudo propõe o cuidado de enfermagem, baseado nos princípios de Parse, a pessoas com hipertensão consultadas na Estratégia Saúde da Família. Estudo descritivo, de cunho qualitativo, realizado de março a maio de 2011, com quatorze enfermeiros no município de Itapajé-Ceará. Para coleta das informações utilizou-se a entrevista semiestruturada e, para análise, o discurso dos sujeitos. Emergiram três categorias baseadas nos princípios de Parse: Multidimensão dos significados - o enfermeiro conduz ao relato dos significados; Sincronização de ritmos - o enfermeiro ajuda a identificar harmonia e desarmonia; Mobilização da transcendência - o enfermeiro guia o plano de mudanças. Notou-se aproximação dos discursos ao teorizado por Parse quando citaram buscar um cuidado humanizado, com a participação da família, valorização da autonomia, utilização da educação em saúde, com orientações individuais. Percebeu-se a viabilidade na implementação do cuidado de enfermagem fundamentado na Teoria de Parse a pessoas com hipertensão.Este estudio propone la atención de enfermería, basada en los principios de Parse, para personas con hipertensión en la Estrategia de Salud Familiar. Estudio descriptivo, cualitativo, realizado de marzo a mayo/2011, con catorce enfermeros en Itapajé, Ceará. Para la recolección de las informaciones, se utilizó la entrevista semiestructurada y para análisis, el discurso de los sujetos. Emergieron tres categorías: Multidimensiones de los significados - el enfermero conduce al relato de los significados; Sincronización de los ritmos - el enfermero ayuda a identificar armonía y desarmonía; Movilización de la trascendencia - el enfermero guía el plan de cambios. Se observó semejanzas entre el enfoque de los discursos y la Teoría de Parse, cuando citaron la búsqueda de atención humanizada, con participación de la familia, valoración de la autonomía, uso de la educación en salud

GeoBrain for Facilitating Earth Science Education in Higher-Education Institutes--Experience and Lessons-learned

Science.gov (United States)

Deng, M.; di, L.

2007-12-01

Data integration and analysis are the foundation for the scientific investigation in Earth science. In the past several decades, huge amounts of Earth science data have been collected mainly through remote sensing. Those data have become the treasure for Earth science research. Training students how to discover and use the huge volume of Earth science data in research become one of the most important trainings for making a student a qualified scientist. Being developed by a NASA funded project, the GeoBrain system has adopted and implemented the latest Web services and knowledge management technologies for providing innovative methods in publishing, accessing, visualizing, and analyzing geospatial data and in building/sharing geoscience knowledge. It provides a data-rich online learning and research environment enabled by wealthy data and information available at NASA Earth Observing System (EOS) Data and Information System (EOSDIS). Students, faculty members, and researchers from institutes worldwide can easily access, analyze, and model with the huge amount of NASA EOS data just like they possess such vast resources locally at their desktops. Although still in development, the GeoBrain system has been operational since 2005. A number of education materials have been developed for facilitating the use of GeoBrain as a powerful education tool for Earth science education at both undergraduate and graduate levels. Thousands of online higher-education users worldwide have used GeoBrain services. A number of faculty members in multiple universities have been funded as GeoBrain education partners to explore the use of GeoBrain in the classroom teaching and student research. By summarizing and analyzing the feedbacks from the online users and the education partners, this presentation presents the user experiences on using GeoBrain in Earth science teaching and research. The feedbacks on classroom use of GeoBrain have demonstrated that GeoBrain is very useful for

Spatio-Temporal Analysis of Epidemic Phenomena Using the R Package surveillance

Directory of Open Access Journals (Sweden)

Sebastian Meyer

2017-05-01

Full Text Available The availability of geocoded health data and the inherent temporal structure of communicable diseases have led to an increased interest in statistical models and software for spatio-temporal data with epidemic features. The open source R package surveillance can handle various levels of aggregation at which infective events have been recorded: individual-level time-stamped geo-referenced data (case reports in either continuous space or discrete space, as well as counts aggregated by period and region. For each of these data types, the surveillance package implements tools for visualization, likelihoood inference and simulation from recently developed statistical regression frameworks capturing endemic and epidemic dynamics. Altogether, this paper is a guide to the spatio-temporal modeling of epidemic phenomena, exemplified by analyses of public health surveillance data on measles and invasive meningococcal disease.

Calibration of GEO 600 for the S1 science run

International Nuclear Information System (INIS)

Hewitson, M; Grote, H; Heinzel, G; Strain, K A; Ward, H; Weiland, U

2003-01-01

In 2002, the interferometric gravitational wave detector GEO 600 took part in a coincident science run (S1) with other detectors world-wide. When completed, GEO will employ a dual-recycling scheme which will allow its peak sensitivity to be tuned over a range of frequencies in the detection band. Still in the commissioning phase, GEO was operated as a power-recycled Michelson for the duration of S1. The accurate calibration of the sensitivity of GEO to gravitational waves is a critical step in preparing GEO data for exchange with other detectors forming a world-wide detector network. An online calibration scheme has been developed to perform real-time calibration of the power-recycled GEO detector. This scheme will later be extended to cover the more complex case of the dual-recycled interferometer in which multiple output signals will need to be combined to optimally recover a calibrated strain channel. This report presents an outline of the calibration scheme that was used during S1. Also presented are results of detector characterization work that arises naturally from the calibration work

Utility assessment of a map-based online geo-collaboration tool.

Science.gov (United States)

Sidlar, Christopher L; Rinner, Claus

2009-05-01

Spatial group decision-making processes often include both informal and analytical components. Discussions among stakeholders or planning experts are an example of an informal component. When participants discuss spatial planning projects they typically express concerns and comments by pointing to places on a map. The Argumentation Map model provides a conceptual basis for collaborative tools that enable explicit linkages of arguments to the places to which they refer. These tools allow for the input of explicitly geo-referenced arguments as well as the visual access to arguments through a map interface. In this paper, we will review previous utility studies in geo-collaboration and evaluate a case study of a Web-based Argumentation Map application. The case study was conducted in the summer of 2005 when student participants discussed planning issues on the University of Toronto St. George campus. During a one-week unmoderated discussion phase, 11 participants wrote 60 comments on issues such as safety, facilities, parking, and building aesthetics. By measuring the participants' use of geographic references, we draw conclusions on how well the software tool supported the potential of the underlying concept. This research aims to contribute to a scientific approach to geo-collaboration in which the engineering of novel spatial decision support methods is complemented by a critical assessment of their utility in controlled, realistic experiments.

Telugu dependency parsing using different statistical parsers

Directory of Open Access Journals (Sweden)

B. Venkata Seshu Kumari

2017-01-01

Full Text Available In this paper we explore different statistical dependency parsers for parsing Telugu. We consider five popular dependency parsers namely, MaltParser, MSTParser, TurboParser, ZPar and Easy-First Parser. We experiment with different parser and feature settings and show the impact of different settings. We also provide a detailed analysis of the performance of all the parsers on major dependency labels. We report our results on test data of Telugu dependency treebank provided in the ICON 2010 tools contest on Indian languages dependency parsing. We obtain state-of-the art performance of 91.8% in unlabeled attachment score and 70.0% in labeled attachment score. To the best of our knowledge ours is the only work which explored all the five popular dependency parsers and compared the performance under different feature settings for Telugu.

Epidemics and rumours in complex networks

CERN Document Server

Draief, Moez

2009-01-01

Information propagation through peer-to-peer systems, online social systems, wireless mobile ad hoc networks and other modern structures can be modelled as an epidemic on a network of contacts. Understanding how epidemic processes interact with network topology allows us to predict ultimate course, understand phase transitions and develop strategies to control and optimise dissemination. This book is a concise introduction for applied mathematicians and computer scientists to basic models, analytical tools and mathematical and algorithmic results. Mathematical tools introduced include coupling

Single-View 3D Scene Reconstruction and Parsing by Attribute Grammar.

Science.gov (United States)

Liu, Xiaobai; Zhao, Yibiao; Zhu, Song-Chun

2018-03-01

In this paper, we present an attribute grammar for solving two coupled tasks: i) parsing a 2D image into semantic regions; and ii) recovering the 3D scene structures of all regions. The proposed grammar consists of a set of production rules, each describing a kind of spatial relation between planar surfaces in 3D scenes. These production rules are used to decompose an input image into a hierarchical parse graph representation where each graph node indicates a planar surface or a composite surface. Different from other stochastic image grammars, the proposed grammar augments each graph node with a set of attribute variables to depict scene-level global geometry, e.g., camera focal length, or local geometry, e.g., surface normal, contact lines between surfaces. These geometric attributes impose constraints between a node and its off-springs in the parse graph. Under a probabilistic framework, we develop a Markov Chain Monte Carlo method to construct a parse graph that optimizes the 2D image recognition and 3D scene reconstruction purposes simultaneously. We evaluated our method on both public benchmarks and newly collected datasets. Experiments demonstrate that the proposed method is capable of achieving state-of-the-art scene reconstruction of a single image.

Recursive Neural Networks Based on PSO for Image Parsing

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Guo-Rong Cai

2013-01-01

Full Text Available This paper presents an image parsing algorithm which is based on Particle Swarm Optimization (PSO and Recursive Neural Networks (RNNs. State-of-the-art method such as traditional RNN-based parsing strategy uses L-BFGS over the complete data for learning the parameters. However, this could cause problems due to the nondifferentiable objective function. In order to solve this problem, the PSO algorithm has been employed to tune the weights of RNN for minimizing the objective. Experimental results obtained on the Stanford background dataset show that our PSO-based training algorithm outperforms traditional RNN, Pixel CRF, region-based energy, simultaneous MRF, and superpixel MRF.

Parsing polarization squeezing into Fock layers

DEFF Research Database (Denmark)

Mueller, Christian R.; Madsen, Lars Skovgaard; Klimov, Andrei B.

2016-01-01

photon number do the methods coincide; when the photon number is indefinite, we parse the state in Fock layers, finding that substantially higher squeezing can be observed in some of the single layers. By capitalizing on the properties of the Husimi Q function, we map this notion onto the Poincare space......, providing a full account of the measured squeezing....

Sequence distance via parsing complexity: Heartbeat signals

International Nuclear Information System (INIS)

Degli Esposti, M.; Farinelli, C.; Menconi, G.

2009-01-01

We compare and discuss the use of different symbolic codings of electrocardiogram (ECG) signals in order to distinguish healthy patients from hospitalized ones. To this aim, we recall a parsing-based similarity distance and compare the performances of several methods of classification of data.

YakYak: Parsing with Logical Side Constraints

DEFF Research Database (Denmark)

Hansen, Niels Damgaard; Klarlund, Nils; Schwartzbach, Michael Ignatieff

2000-01-01

Yak, which extends Yacc with first-order logic for specifying consteaints that are regular tree languages. Concise formulas about the parse tree replace explicit programming, and they are turned into canonical attribute grammars through tree automata calculations. YakYak is implemented as a proprocessor...

ParseCNV integrative copy number variation association software with quality tracking.

Science.gov (United States)

Glessner, Joseph T; Li, Jin; Hakonarson, Hakon

2013-03-01

A number of copy number variation (CNV) calling algorithms exist; however, comprehensive software tools for CNV association studies are lacking. We describe ParseCNV, unique software that takes CNV calls and creates probe-based statistics for CNV occurrence in both case-control design and in family based studies addressing both de novo and inheritance events, which are then summarized based on CNV regions (CNVRs). CNVRs are defined in a dynamic manner to allow for a complex CNV overlap while maintaining precise association region. Using this approach, we avoid failure to converge and non-monotonic curve fitting weaknesses of programs, such as CNVtools and CNVassoc, and although Plink is easy to use, it only provides combined CNV state probe-based statistics, not state-specific CNVRs. Existing CNV association methods do not provide any quality tracking information to filter confident associations, a key issue which is fully addressed by ParseCNV. In addition, uncertainty in CNV calls underlying CNV associations is evaluated to verify significant results, including CNV overlap profiles, genomic context, number of probes supporting the CNV and single-probe intensities. When optimal quality control parameters are followed using ParseCNV, 90% of CNVs validate by polymerase chain reaction, an often problematic stage because of inadequate significant association review. ParseCNV is freely available at http://parsecnv.sourceforge.net.

Sleep Disrupts High-Level Speech Parsing Despite Significant Basic Auditory Processing.

Science.gov (United States)

Makov, Shiri; Sharon, Omer; Ding, Nai; Ben-Shachar, Michal; Nir, Yuval; Zion Golumbic, Elana

2017-08-09

The extent to which the sleeping brain processes sensory information remains unclear. This is particularly true for continuous and complex stimuli such as speech, in which information is organized into hierarchically embedded structures. Recently, novel metrics for assessing the neural representation of continuous speech have been developed using noninvasive brain recordings that have thus far only been tested during wakefulness. Here we investigated, for the first time, the sleeping brain's capacity to process continuous speech at different hierarchical levels using a newly developed Concurrent Hierarchical Tracking (CHT) approach that allows monitoring the neural representation and processing-depth of continuous speech online. Speech sequences were compiled with syllables, words, phrases, and sentences occurring at fixed time intervals such that different linguistic levels correspond to distinct frequencies. This enabled us to distinguish their neural signatures in brain activity. We compared the neural tracking of intelligible versus unintelligible (scrambled and foreign) speech across states of wakefulness and sleep using high-density EEG in humans. We found that neural tracking of stimulus acoustics was comparable across wakefulness and sleep and similar across all conditions regardless of speech intelligibility. In contrast, neural tracking of higher-order linguistic constructs (words, phrases, and sentences) was only observed for intelligible speech during wakefulness and could not be detected at all during nonrapid eye movement or rapid eye movement sleep. These results suggest that, whereas low-level auditory processing is relatively preserved during sleep, higher-level hierarchical linguistic parsing is severely disrupted, thereby revealing the capacity and limits of language processing during sleep. SIGNIFICANCE STATEMENT Despite the persistence of some sensory processing during sleep, it is unclear whether high-level cognitive processes such as speech

Errors and improvements in the use of archived meteorological data for chemical transport modeling: an analysis using GEOS-Chem v11-01 driven by GEOS-5 meteorology

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K. Yu

2018-01-01

Full Text Available Global simulations of atmospheric chemistry are commonly conducted with off-line chemical transport models (CTMs driven by archived meteorological data from general circulation models (GCMs. The off-line approach has the advantages of simplicity and expediency, but it incurs errors due to temporal averaging in the meteorological archive and the inability to reproduce the GCM transport algorithms exactly. The CTM simulation is also often conducted at coarser grid resolution than the parent GCM. Here we investigate this cascade of CTM errors by using 222Rn–210Pb–7Be chemical tracer simulations off-line in the GEOS-Chem CTM at rectilinear 0.25°  ×  0.3125° (≈ 25 km and 2°  ×  2.5° (≈ 200 km resolutions and online in the parent GEOS-5 GCM at cubed-sphere c360 (≈ 25 km and c48 (≈ 200 km horizontal resolutions. The c360 GEOS-5 GCM meteorological archive, updated every 3 h and remapped to 0.25°  ×  0.3125°, is the standard operational product generated by the NASA Global Modeling and Assimilation Office (GMAO and used as input by GEOS-Chem. We find that the GEOS-Chem 222Rn simulation at native 0.25°  ×  0.3125° resolution is affected by vertical transport errors of up to 20 % relative to the GEOS-5 c360 online simulation, in part due to loss of transient organized vertical motions in the GCM (resolved convection that are temporally averaged out in the 3 h meteorological archive. There is also significant error caused by operational remapping of the meteorological archive from a cubed-sphere to a rectilinear grid. Decreasing the GEOS-Chem resolution from 0.25°  ×  0.3125° to 2°  ×  2.5° induces further weakening of vertical transport as transient vertical motions are averaged out spatially and temporally. The resulting 222Rn concentrations simulated by the coarse-resolution GEOS-Chem are overestimated by up to 40 % in surface air relative to the

Modelling Poly-Aromatic Hydrocarbons "online" with the GEOS-Chem Europe and Asia regional models.

Science.gov (United States)

Ivatt, P.; Evans, M. J.

2017-12-01

Poly-Aromatic Hydrocarbons (PAHs) are carcinogens and so are restricted by international treaties. PAHs are mainly emitted into the atmosphere by domestic (heating and cooking), natural (forest fires burning), as well as some industrial processes (coke ovens). PAHs partition between the gas and particle phase (notably carbonaceous particles) based on their volatility. In recent years, interest has turned to the possible health effects of their oxidation products (both nitrogenated and oxygenated) as it has been suggested that these oxidation products may be even more carcinogenic than the parent PAHs. To increase our understanding of the processes controlling the regional concentrations of PAHs and their oxidation products an "online" PAH model has been developed within the GEOS-Chem framework. This provides for the representation of the coupled aerosol/gas phase chemistry of the parent PAH and its secondary oxidation products. Benzo[a]pyrene is used as an exemplar but the methodology is flexible and the approach can be used for any PAH species. Comparisons are made with observations and the sources of variability discussed.

Social media analytics and research testbed (SMART: Exploring spatiotemporal patterns of human dynamics with geo-targeted social media messages

Directory of Open Access Journals (Sweden)

Jiue-An Yang

2016-06-01

Full Text Available The multilevel model of meme diffusion conceptualizes how mediated messages diffuse over time and space. As a pilot application of implementing the meme diffusion, we developed the social media analytics and research testbed to monitor Twitter messages and track the diffusion of information in and across different cities and geographic regions. Social media analytics and research testbed is an online geo-targeted search and analytics tool, including an automatic data processing procedure at the backend and an interactive frontend user interface. Social media analytics and research testbed is initially designed to facilitate (1 searching and geo-locating tweet topics and terms in different cities and geographic regions; (2 filtering noise from raw data (such as removing redundant retweets and using machine learning methods to improve precision; (3 analyzing social media data from a spatiotemporal perspective; and (4 visualizing social media data in diagnostic ways (such as weekly and monthly trends, trend maps, top media, top retweets, top mentions, or top hashtags. Social media analytics and research testbed provides researchers and domain experts with a tool that can efficiently facilitate the refinement, formalization, and testing of research hypotheses or questions. Three case studies (flu outbreaks, Ebola epidemic, and marijuana legalization are introduced to illustrate how the predictions of meme diffusion can be examined and to demonstrate the potentials and key functions of social media analytics and research testbed.

Living with geo-resources and geo-hazards

NARCIS (Netherlands)

Hangx, Suzanne|info:eu-repo/dai/nl/30483579X; Niemeijer, André|info:eu-repo/dai/nl/370832132

2015-01-01

Two of the key strategic topics on the European Committee’s Horizon2020 Roadmap revolve around geo-resources and geo-hazards, and their impact on societal and economic development. On the way towards a better policy for sustainable geo-resources production, such as oil, gas, geothermal energy and

Finding EL+ justifications using the Earley parsing algorithm

CSIR Research Space (South Africa)

Nortje, R

2009-12-01

Full Text Available into a reachability preserving context free grammar (CFG). The well known earley algorithm for parsing strings, given some CFG, is then applied to the problem of extracting minimal reachability-based axiom sets for subsumption entailments. The author has...

Geoscience data visualization and analysis using GeoMapApp

Science.gov (United States)

Ferrini, Vicki; Carbotte, Suzanne; Ryan, William; Chan, Samantha

2013-04-01

Increased availability of geoscience data resources has resulted in new opportunities for developing visualization and analysis tools that not only promote data integration and synthesis, but also facilitate quantitative cross-disciplinary access to data. Interdisciplinary investigations, in particular, frequently require visualizations and quantitative access to specialized data resources across disciplines, which has historically required specialist knowledge of data formats and software tools. GeoMapApp (www.geomapapp.org) is a free online data visualization and analysis tool that provides direct quantitative access to a wide variety of geoscience data for a broad international interdisciplinary user community. While GeoMapApp provides access to online data resources, it can also be packaged to work offline through the deployment of a small portable hard drive. This mode of operation can be particularly useful during field programs to provide functionality and direct access to data when a network connection is not possible. Hundreds of data sets from a variety of repositories are directly accessible in GeoMapApp, without the need for the user to understand the specifics of file formats or data reduction procedures. Available data include global and regional gridded data, images, as well as tabular and vector datasets. In addition to basic visualization and data discovery functionality, users are provided with simple tools for creating customized maps and visualizations and to quantitatively interrogate data. Specialized data portals with advanced functionality are also provided for power users to further analyze data resources and access underlying component datasets. Users may import and analyze their own geospatial datasets by loading local versions of geospatial data and can access content made available through Web Feature Services (WFS) and Web Map Services (WMS). Once data are loaded in GeoMapApp, a variety options are provided to export data and/or 2D/3D

Parsing Universal Dependencies without training

DEFF Research Database (Denmark)

Martínez Alonso, Héctor; Agic, Zeljko; Plank, Barbara

2017-01-01

We present UDP, the first training-free parser for Universal Dependencies (UD). Our algorithm is based on PageRank and a small set of specific dependency head rules. UDP features two-step decoding to guarantee that function words are attached as leaf nodes. The parser requires no training......, and it is competitive with a delexicalized transfer system. UDP offers a linguistically sound unsupervised alternative to cross-lingual parsing for UD. The parser has very few parameters and distinctly robust to domain change across languages....

Seeking an optimal renal replacement therapy for the chronic kidney disease epidemic: the case for on-line hemodiafiltration.

Science.gov (United States)

Gatti, Emanuele; Ronco, Claudio

2011-01-01

the overall costs incurred by payers of renal care. In short, optimal care needs to be provided with shrinking resources and without compromising the medical appropriateness of the therapy. Additionally, we believe ensuring improved quality of life is just as important as prolonging patient survival. Therefore, a balanced compromise between optimal and affordable technology is required in order to reach the targets of achieving good medical care and meeting the expectations of patients, their families, healthcare providers, and society as a whole. Under these premises, and focusing on the aforementioned targets, we believe that on-line hemodiafiltration (HDF) represents the most advanced and clinically appropriate RRT modality available to best cope with the CKD epidemic. Together with the guidance and recommendations of those taking care of CKD patients on dialysis therapy, the contribution of industry is indispensable for the availability of highly reliable and affordable solutions to the impending dilemma. As representatives of the academic-medical community and of industry, we present a joint case for the application of on-line HDF towards meeting the challenge of large-scale provision of dialysis under an increasingly restrictive financial climate. Copyright © 2011 S. Karger AG, Basel.

Addressing the "Epidemic" of Overweight Children by Using the Internet

Science.gov (United States)

Coleman, Mick; Wallinga, Charlotte; Bales, Diane

2009-01-01

The Internet can be of great assistance to early childhood teachers in planning educational activities for the classroom and with families. This article explores how early childhood teachers can use resources online to address what has been called an "epidemic" of overweight children. Guidelines for using online resources are presented. (Contains…

Parsing with subdomain instance weighting from raw corpora

NARCIS (Netherlands)

Plank, B.; Sima'an, K.

2008-01-01

The treebanks that are used for training statistical parsers consist of hand-parsed sentences from a single source/domain like newspaper text. However, newspaper text concerns different subdomains of language use (e.g. finance, sports, politics, music), which implies that the statistics gathered by

Parsing with Subdomain Instance Weighting from Raw Corpora

NARCIS (Netherlands)

Plank, Barbara; Sima'an, Khalil

2008-01-01

The treebanks that are used for training statistical parsers consist of hand-parsed sentences from a single source/domain like newspaper text. However, newspaper text concerns different subdomains of language use (e.g. finance, sports, politics, music), which implies that the statistics gathered by

Perceiving Event Dynamics and Parsing Hollywood Films

Science.gov (United States)

Cutting, James E.; Brunick, Kaitlin L.; Candan, Ayse

2012-01-01

We selected 24 Hollywood movies released from 1940 through 2010 to serve as a film corpus. Eight viewers, three per film, parsed them into events, which are best termed subscenes. While watching a film a second time, viewers scrolled through frames and recorded the frame number where each event began. Viewers agreed about 90% of the time. We then…

Time-Driven Effects on Parsing during Reading

Science.gov (United States)

Roll, Mikael; Lindgren, Magnus; Alter, Kai; Horne, Merle

2012-01-01

The phonological trace of perceived words starts fading away in short-term memory after a few seconds. Spoken utterances are usually 2-3 s long, possibly to allow the listener to parse the words into coherent prosodic phrases while they still have a clear representation. Results from this brain potential study suggest that even during silent…

"gnparser": a powerful parser for scientific names based on Parsing Expression Grammar.

Science.gov (United States)

Mozzherin, Dmitry Y; Myltsev, Alexander A; Patterson, David J

2017-05-26

Scientific names in biology act as universal links. They allow us to cross-reference information about organisms globally. However variations in spelling of scientific names greatly diminish their ability to interconnect data. Such variations may include abbreviations, annotations, misspellings, etc. Authorship is a part of a scientific name and may also differ significantly. To match all possible variations of a name we need to divide them into their elements and classify each element according to its role. We refer to this as 'parsing' the name. Parsing categorizes name's elements into those that are stable and those that are prone to change. Names are matched first by combining them according to their stable elements. Matches are then refined by examining their varying elements. This two stage process dramatically improves the number and quality of matches. It is especially useful for the automatic data exchange within the context of "Big Data" in biology. We introduce Global Names Parser (gnparser). It is a Java tool written in Scala language (a language for Java Virtual Machine) to parse scientific names. It is based on a Parsing Expression Grammar. The parser can be applied to scientific names of any complexity. It assigns a semantic meaning (such as genus name, species epithet, rank, year of publication, authorship, annotations, etc.) to all elements of a name. It is able to work with nested structures as in the names of hybrids. gnparser performs with ≈99% accuracy and processes 30 million name-strings/hour per CPU thread. The gnparser library is compatible with Scala, Java, R, Jython, and JRuby. The parser can be used as a command line application, as a socket server, a web-app or as a RESTful HTTP-service. It is released under an Open source MIT license. Global Names Parser (gnparser) is a fast, high precision tool for biodiversity informaticians and biologists working with large numbers of scientific names. It can replace expensive and error

Análisis de los posibles desde la teoría de Parse en una persona con Alzheimer The analysis of the possibles through Parse's theory on a person with Alzheimer

Directory of Open Access Journals (Sweden)

Virtudes Rodero-Sánchez

2006-11-01

Full Text Available Cuando una persona acude al sistema sanitario con un problema de salud, con mucha frecuencia se le va a pedir que introduzca cambios en sus hábitos y estilo de vida. Esta demanda se suele concretar en un pacto-compromiso que se establece persona-profesional. Hemos observado que este pacto, a pesar de que el profesional se esfuerza en enmarcarlo en objetivos realistas, con demasiada frecuencia sobreviene la frustración, sobre todo en escenarios de cronicidad. La teoría de Parse nos ofrece una manera diferente de abordar el cambio. En la teoría de Parse, El Ser Humano en Devenir, los posibles son la expresión de la fuerza, entendida como una manera única de transformación, que consiste en avanzar con las esperanzas, anhelos y los proyectos de la persona. Planteamos: en primer lugar un análisis de los elementos de lo que Parse llama su tercer principio, la co-trancendencia con los posibles; en segundo lugar el análisis de los posibles desde este marco de referencia a través de una narrativa; y por último la práctica enfermera.When a person comes to the Health Care System with a health problem will often be asked to change some of his habits and lifestyles. This demand becomes a compromise-pact between the person and the professional. We have observed that in this compromise-pact, despite the effort of the professional to hide it behind realist targets, the patient usually becomes frustrated, especially in cases of chronic illnesses. Parse's theory offers us a different way to approach the change. In Parse's theory, The Human Becoming, the possibles are the expression of power, understood as a unique way of transformation, consisting in advancing with the hopes, desires and projects of a person. We suggest, first of all, an analysis of the elements that Parse calls her third principle: co-transcendence with the possibles; secondly, the analysis of the possibles from the basis of this reference framework through a narration and, finally

An online operational rainfall-monitoring resource for epidemic malaria early warning systems in Africa

Science.gov (United States)

Grover-Kopec, Emily; Kawano, Mika; Klaver, Robert W.; Blumenthal, Benno; Ceccato, Pietro; Connor, Stephen J.

2005-01-01

Periodic epidemics of malaria are a major public health problem for many sub-Saharan African countries. Populations in epidemic prone areas have a poorly developed immunity to malaria and the disease remains life threatening to all age groups. The impact of epidemics could be minimized by prediction and improved prevention through timely vector control and deployment of appropriate drugs. Malaria Early Warning Systems are advocated as a means of improving the opportunity for preparedness and timely response.Rainfall is one of the major factors triggering epidemics in warm semi-arid and desert-fringe areas. Explosive epidemics often occur in these regions after excessive rains and, where these follow periods of drought and poor food security, can be especially severe. Consequently, rainfall monitoring forms one of the essential elements for the development of integrated Malaria Early Warning Systems for sub-Saharan Africa, as outlined by the World Health Organization.The Roll Back Malaria Technical Resource Network on Prevention and Control of Epidemics recommended that a simple indicator of changes in epidemic risk in regions of marginal transmission, consisting primarily of rainfall anomaly maps, could provide immediate benefit to early warning efforts. In response to these recommendations, the Famine Early Warning Systems Network produced maps that combine information about dekadal rainfall anomalies, and epidemic malaria risk, available via their Africa Data Dissemination Service. These maps were later made available in a format that is directly compatible with HealthMapper, the mapping and surveillance software developed by the WHO's Communicable Disease Surveillance and Response Department. A new monitoring interface has recently been developed at the International Research Institute for Climate Prediction (IRI) that enables the user to gain a more contextual perspective of the current rainfall estimates by comparing them to previous seasons and climatological

GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records.

Science.gov (United States)

Tahsin, Tasnia; Weissenbacher, Davy; O'Connor, Karen; Magge, Arjun; Scotch, Matthew; Gonzalez-Hernandez, Graciela

2018-05-01

GeoBoost is a command-line software package developed to address sparse or incomplete metadata in GenBank sequence records that relate to the location of the infected host (LOIH) of viruses. Given a set of GenBank accession numbers corresponding to virus GenBank records, GeoBoost extracts, integrates and normalizes geographic information reflecting the LOIH of the viruses using integrated information from GenBank metadata and related full-text publications. In addition, to facilitate probabilistic geospatial modeling, GeoBoost assigns probability scores for each possible LOIH. Binaries and resources required for running GeoBoost are packed into a single zipped file and freely available for download at https://tinyurl.com/geoboost. A video tutorial is included to help users quickly and easily install and run the software. The software is implemented in Java 1.8, and supported on MS Windows and Linux platforms. gragon@upenn.edu. Supplementary data are available at Bioinformatics online.

Development of Geo-Marketing

OpenAIRE

Tatiana Ozhereleva

2014-01-01

This article analyzes the state and development of geo-marketing. The author illustrates the multi-aspectedness of geo-marketing: applied technology and management technology. The article demonstrates that geo-marketing can be viewed as a reflection of the processes of co-evolution in society. The author brings to light the specifics of geo-marketing research and situational analysis in geo-marketing. The article describes applications of geo-marketing

Development of Geo-Marketing

Directory of Open Access Journals (Sweden)

Tatiana Ozhereleva

2014-10-01

Full Text Available This article analyzes the state and development of geo-marketing. The author illustrates the multi-aspectedness of geo-marketing: applied technology and management technology. The article demonstrates that geo-marketing can be viewed as a reflection of the processes of co-evolution in society. The author brings to light the specifics of geo-marketing research and situational analysis in geo-marketing. The article describes applications of geo-marketing

Epidemic threshold in directed networks

Science.gov (United States)

Li, Cong; Wang, Huijuan; Van Mieghem, Piet

2013-12-01

Epidemics have so far been mostly studied in undirected networks. However, many real-world networks, such as the online social network Twitter and the world wide web, on which information, emotion, or malware spreads, are directed networks, composed of both unidirectional links and bidirectional links. We define the directionality ξ as the percentage of unidirectional links. The epidemic threshold τc for the susceptible-infected-susceptible (SIS) epidemic is lower bounded by 1/λ1 in directed networks, where λ1, also called the spectral radius, is the largest eigenvalue of the adjacency matrix. In this work, we propose two algorithms to generate directed networks with a given directionality ξ. The effect of ξ on the spectral radius λ1, principal eigenvector x1, spectral gap (λ1-λ2), and algebraic connectivity μN-1 is studied. Important findings are that the spectral radius λ1 decreases with the directionality ξ, whereas the spectral gap and the algebraic connectivity increase with the directionality ξ. The extent of the decrease of the spectral radius depends on both the degree distribution and the degree-degree correlation ρD. Hence, in directed networks, the epidemic threshold is larger and a random walk converges to its steady state faster than that in undirected networks with the same degree distribution.

Fetching and Parsing Data from the Web with OpenRefine

Directory of Open Access Journals (Sweden)

Evan Peter Williamson

2017-08-01

Full Text Available OpenRefine is a powerful tool for exploring, cleaning, and transforming data. An earlier Programming Historian lesson, “Cleaning Data with OpenRefine”, introduced the basic functionality of Refine to efficiently discover and correct inconsistency in a data set. Building on those essential data wrangling skills, this lesson focuses on Refine’s ability to fetch URLs and parse web content. Examples introduce some of the advanced features to transform and enhance a data set including: - fetch URLs using Refine - construct URL queries to retrieve information from a simple web API - parse HTML and JSON responses to extract relevant data - use array functions to manipulate string values - use Jython to extend Refine’s functionality It will be helpful to have basic familiarity with OpenRefine, HTML, and programming concepts such as variables and loops to complete this lesson.

An online operational rainfall-monitoring resource for epidemic malaria early warning systems in Africa

Directory of Open Access Journals (Sweden)

Ceccato Pietro

2005-01-01

Full Text Available Abstract Periodic epidemics of malaria are a major public health problem for many sub-Saharan African countries. Populations in epidemic prone areas have a poorly developed immunity to malaria and the disease remains life threatening to all age groups. The impact of epidemics could be minimized by prediction and improved prevention through timely vector control and deployment of appropriate drugs. Malaria Early Warning Systems are advocated as a means of improving the opportunity for preparedness and timely response. Rainfall is one of the major factors triggering epidemics in warm semi-arid and desert-fringe areas. Explosive epidemics often occur in these regions after excessive rains and, where these follow periods of drought and poor food security, can be especially severe. Consequently, rainfall monitoring forms one of the essential elements for the development of integrated Malaria Early Warning Systems for sub-Saharan Africa, as outlined by the World Health Organization. The Roll Back Malaria Technical Resource Network on Prevention and Control of Epidemics recommended that a simple indicator of changes in epidemic risk in regions of marginal transmission, consisting primarily of rainfall anomaly maps, could provide immediate benefit to early warning efforts. In response to these recommendations, the Famine Early Warning Systems Network produced maps that combine information about dekadal rainfall anomalies, and epidemic malaria risk, available via their Africa Data Dissemination Service. These maps were later made available in a format that is directly compatible with HealthMapper, the mapping and surveillance software developed by the WHO's Communicable Disease Surveillance and Response Department. A new monitoring interface has recently been developed at the International Research Institute for Climate Prediction (IRI that enables the user to gain a more contextual perspective of the current rainfall estimates by comparing them to

Advanced programming concepts in a course on grammars and parsing

NARCIS (Netherlands)

Jeuring, J.T.; Swierstra, S.D.

1999-01-01

One of the important goals of the Computer Science curriculum at Utrecht University is to familiarize students with abstract programming concepts such as, for example, partial evaluation and deforestation. A course on grammars and parsing offers excellent possibilities for exemplifying and

A Python package for parsing, validating, mapping and formatting sequence variants using HGVS nomenclature.

Science.gov (United States)

Hart, Reece K; Rico, Rudolph; Hare, Emily; Garcia, John; Westbrook, Jody; Fusaro, Vincent A

2015-01-15

Biological sequence variants are commonly represented in scientific literature, clinical reports and databases of variation using the mutation nomenclature guidelines endorsed by the Human Genome Variation Society (HGVS). Despite the widespread use of the standard, no freely available and comprehensive programming libraries are available. Here we report an open-source and easy-to-use Python library that facilitates the parsing, manipulation, formatting and validation of variants according to the HGVS specification. The current implementation focuses on the subset of the HGVS recommendations that precisely describe sequence-level variation relevant to the application of high-throughput sequencing to clinical diagnostics. The package is released under the Apache 2.0 open-source license. Source code, documentation and issue tracking are available at http://bitbucket.org/hgvs/hgvs/. Python packages are available at PyPI (https://pypi.python.org/pypi/hgvs). Supplementary data are available at Bioinformatics online. © The Author 2014. Published by Oxford University Press.

Fast Parsing using Pruning and Grammar Specialization

OpenAIRE

Rayner, Manny; Carter, David

1996-01-01

We show how a general grammar may be automatically adapted for fast parsing of utterances from a specific domain by means of constituent pruning and grammar specialization based on explanation-based learning. These methods together give an order of magnitude increase in speed, and the coverage loss entailed by grammar specialization is reduced to approximately half that reported in previous work. Experiments described here suggest that the loss of coverage has been reduced to the point where ...

Is human sentence parsing serial or parallel? Evidence from event-related brain potentials.

Science.gov (United States)

Hopf, Jens-Max; Bader, Markus; Meng, Michael; Bayer, Josef

2003-01-01

In this ERP study we investigate the processes that occur in syntactically ambiguous German sentences at the point of disambiguation. Whereas most psycholinguistic theories agree on the view that processing difficulties arise when parsing preferences are disconfirmed (so-called garden-path effects), important differences exist with respect to theoretical assumptions about the parser's recovery from a misparse. A key distinction can be made between parsers that compute all alternative syntactic structures in parallel (parallel parsers) and parsers that compute only a single preferred analysis (serial parsers). To distinguish empirically between parallel and serial parsing models, we compare ERP responses to garden-path sentences with ERP responses to truly ungrammatical sentences. Garden-path sentences contain a temporary and ultimately curable ungrammaticality, whereas truly ungrammatical sentences remain so permanently--a difference which gives rise to different predictions in the two classes of parsing architectures. At the disambiguating word, ERPs in both sentence types show negative shifts of similar onset latency, amplitude, and scalp distribution in an initial time window between 300 and 500 ms. In a following time window (500-700 ms), the negative shift to garden-path sentences disappears at right central parietal sites, while it continues in permanently ungrammatical sentences. These data are taken as evidence for a strictly serial parser. The absence of a difference in the early time window indicates that temporary and permanent ungrammaticalities trigger the same kind of parsing responses. Later differences can be related to successful reanalysis in garden-path but not in ungrammatical sentences. Copyright 2003 Elsevier Science B.V.

Geo-Neutrinos

International Nuclear Information System (INIS)

Dye, S.T.

2009-01-01

This paper briefly reviews recent developments in the field of geo-neutrinos. It describes current and future detection projects, discusses modeling projects, suggests an observational program, and visits geo-reactor hypotheses.

Geo-Neutrinos

Energy Technology Data Exchange (ETDEWEB)

Dye, S.T. [Department of Physics and Astronomy, University of Hawaii at Manoa, 2505 Correa Road, Honolulu, Hawaii, 96822 (United States); College of Natural Sciences, Hawaii Pacific University, 45-045 Kamehameha Highway, Kaneohe, Hawaii, 96744 (United States)

2009-03-15

This paper briefly reviews recent developments in the field of geo-neutrinos. It describes current and future detection projects, discusses modeling projects, suggests an observational program, and visits geo-reactor hypotheses.

Preparing GEO 600 for gravitational wave astronomy-a status report

International Nuclear Information System (INIS)

Hewitson, M

2005-01-01

A number of gravitational wave detectors throughout the world are currently moving from the final stages of commissioning to a more continuous observational mode. Together, these detectors form a global network which will search for gravitational waves from various astrophysical sources, such as continuous wave signals from rotating neutron stars, transient signals from, for example, inspiralling compact objects and supernovae explosions, and stochastic gravitational wave signals from the early universe. GEO 600 is a long baseline laser-interferometric gravitational wave detector which employs advanced optical and suspension techniques to reach its design sensitivity. Almost all of the major installation work at GEO 600 is already completed and the detector is currently being commissioned to prepare it for extended observation periods. The commissioning process involves many activities in the areas of noise reduction, calibration, operational stability and characterization. This report highlights some of the major commissioning steps that have contributed to the increase in sensitivity of the instrument over the period from December 2003 to December 2004. In addition, recent extensions to the on-line calibration scheme used in GEO 600 are briefly discussed

Locating and parsing bibliographic references in HTML medical articles.

Science.gov (United States)

Zou, Jie; Le, Daniel; Thoma, George R

2010-06-01

The set of references that typically appear toward the end of journal articles is sometimes, though not always, a field in bibliographic (citation) databases. But even if references do not constitute such a field, they can be useful as a preprocessing step in the automated extraction of other bibliographic data from articles, as well as in computer-assisted indexing of articles. Automation in data extraction and indexing to minimize human labor is key to the affordable creation and maintenance of large bibliographic databases. Extracting the components of references, such as author names, article title, journal name, publication date and other entities, is therefore a valuable and sometimes necessary task. This paper describes a two-step process using statistical machine learning algorithms, to first locate the references in HTML medical articles and then to parse them. Reference locating identifies the reference section in an article and then decomposes it into individual references. We formulate this step as a two-class classification problem based on text and geometric features. An evaluation conducted on 500 articles drawn from 100 medical journals achieves near-perfect precision and recall rates for locating references. Reference parsing identifies the components of each reference. For this second step, we implement and compare two algorithms. One relies on sequence statistics and trains a Conditional Random Field. The other focuses on local feature statistics and trains a Support Vector Machine to classify each individual word, followed by a search algorithm that systematically corrects low confidence labels if the label sequence violates a set of predefined rules. The overall performance of these two reference-parsing algorithms is about the same: above 99% accuracy at the word level, and over 97% accuracy at the chunk level.

A break in the obesity epidemic?

DEFF Research Database (Denmark)

Visscher, T L S; Heitmann, B L; Rissanen, A

2015-01-01

Recent epidemiologic papers are presenting prevalence data suggesting breaks and decreases in obesity rates. However, before concluding that the obesity epidemic is not increasing anymore, the validity of the presented data should be discussed more thoroughly. We had a closer look into the litera......, focusing on trends in waist circumference rather than BMI leads to a less optimistic conclusion: the public health problem of obesity is still increasing.International Journal of Obesity advance online publication, 22 July 2014; doi:10.1038/ijo.2014.98....... into the literature presented in recent reviews to address the major potential biases and distortions, and to develop insights about how to interpret the presented suggestions for a potential break in the obesity epidemic. Decreasing participation rates, the use of reported rather than measured data and small sample...

On the Approximation Ratio of Lempel-Ziv Parsing

DEFF Research Database (Denmark)

Gagie, Travis; Navarro, Gonzalo; Prezza, Nicola

2018-01-01

in the text. Since computing b is NP-complete, a popular gold standard is z, the number of phrases in the Lempel-Ziv parse of the text, where phrases can be copied only from the left. While z can be computed in linear time, almost nothing has been known for decades about its approximation ratio with respect...

A simple DOP model for constituency parsing of Italian sentences

NARCIS (Netherlands)

Sangati, F.

2009-01-01

We present a simplified Data-Oriented Parsing (DOP) formalism for learning the constituency structure of Italian sentences. In our approach we try to simplify the original DOP methodology by constraining the number and type of fragments we extract from the training corpus. We provide some examples

Fuzzy context-free languages - Part 2: Recognition and parsing algorithms

NARCIS (Netherlands)

Asveld, P.R.J.

2005-01-01

In a companion paper [P.R.J. Asveld, Fuzzy context-free languages---Part 1: Generalized fuzzy context-free grammars, Theoret. Comp. Sci. (2005)] we used fuzzy context-free grammars in order to model grammatical errors resulting in erroneous inputs for robust recognizing and parsing algorithms for

Fuzzy Context- Free Languages. Part 2: Recognition and Parsing Algorithms

NARCIS (Netherlands)

Asveld, P.R.J.

2000-01-01

In a companion paper \\cite{Asv:FCF1} we used fuzzy context-free grammars in order to model grammatical errors resulting in erroneous inputs for robust recognizing and parsing algorithms for fuzzy context-free languages. In particular, this approach enables us to distinguish between small errors

Chomsky-Schützenberger parsing for weighted multiple context-free languages

Directory of Open Access Journals (Sweden)

Tobias Denkinger

2017-07-01

Full Text Available We prove a Chomsky-Schützenberger representation theorem for multiple context-free languages weighted over complete commutative strong bimonoids. Using this representation we devise a parsing algorithm for a restricted form of those devices.

Generative re-ranking model for dependency parsing of Italian sentences

NARCIS (Netherlands)

Sangati, F.

2009-01-01

We present a general framework for dependency parsing of Italian sentences based on a combination of discriminative and generative models. We use a state-of-the-art discriminative model to obtain a k-best list of candidate structures for the test sentences, and use the generative model to compute

Fluid migration through geo-membrane seams and through the interface between geo-membrane and geo-synthetic clay liner

International Nuclear Information System (INIS)

Barroso, M.

2005-03-01

Composite liners are used to limit the contamination migration from landfills. Their successful performance is closely related with the geo-membrane as it provides the primary barrier to diffusive and advective transport of contaminants. Critical issues on the performance of the geo-membranes are the seams between geo-membrane panels and the inevitable defects resulting, for instance, from inadequate installation activities. In landfills, where high density polyethylene geo-membranes are usually used, seams are typically made by the thermal-hot dual wedge method. A literature review on quality control of the seams showed that, in situ, fluid-tightness of seams is evaluated in qualitative terms (pass/failure criteria), despite their importance to ensure appropriate performance of the geo-membranes as barriers. In addition, a synthesis of studies on geo-membrane defects indicated that defects varying in density from 0.7 to 15.3 per hectare can be found in landfills. Defects represent preferential flow paths for leachate. Various authors have developed analytical solutions and empirical equations for predicting the flow rate through composite liners due to defects in the geo-membrane. The validity of these methods for composite liners comprising a geo-membrane over a geo-synthetic clay liner (GCL) over a compacted clay liner (CCL) has never been studied from an experimental point of view. To address the problem of fluid migration through the geo-membrane seams, an attempt is made to provide a test method, herein termed as 'gas permeation pouch test', for assessing the quality of the thermal-hot dual wedge seams. This test consists of pressurizing the air channel formed by the double seam with a gas to a specific pressure and, then, measuring the decrease in pressure over time. From the pressure decrease, both the gas permeation coefficients, in steady state conditions, and the time constant, in unsteady state conditions, can be estimated. Experiments were carried out

Geo-neutrino Observation

International Nuclear Information System (INIS)

Dye, S. T.; Alderman, M.; Batygov, M.; Learned, J. G.; Matsuno, S.; Mahoney, J. M.; Pakvasa, S.; Rosen, M.; Smith, S.; Varner, G.; McDonough, W. F.

2009-01-01

Observations of geo-neutrinos measure radiogenic heat production within the earth, providing information on the thermal history and dynamic processes of the mantle. Two detectors currently observe geo-neutrinos from underground locations. Other detection projects in various stages of development include a deep ocean observatory. This paper presents the current status of geo-neutrino observation and describes the scientific capabilities of the deep ocean observatory, with emphasis on geology and neutrino physics.

Introduction to special issue on machine learning approaches to shallow parsing

NARCIS (Netherlands)

Hammerton, J; Osborne, M; Armstrong, S; Daelemans, W

2002-01-01

This article introduces the problem of partial or shallow parsing (assigning partial syntactic structure to sentences) and explains why it is an important natural language processing (NLP) task. The complexity of the task makes Machine Learning an attractive option in comparison to the handcrafting

A Structural-Lexical Measure of Semantic Similarity for Geo-Knowledge Graphs

Directory of Open Access Journals (Sweden)

Andrea Ballatore

2015-04-01

Full Text Available Graphs have become ubiquitous structures to encode geographic knowledge online. The Semantic Web’s linked open data, folksonomies, wiki websites and open gazetteers can be seen as geo-knowledge graphs, that is labeled graphs whose vertices represent geographic concepts and whose edges encode the relations between concepts. To compute the semantic similarity of concepts in such structures, this article defines the network-lexical similarity measure (NLS. This measure estimates similarity by combining two complementary sources of information: the network similarity of vertices and the semantic similarity of the lexical definitions. NLS is evaluated on the OpenStreetMap Semantic Network, a crowdsourced geo-knowledge graph that describes geographic concepts. The hybrid approach outperforms both network and lexical measures, obtaining very strong correlation with the similarity judgments of human subjects.

GeoBolivia the initiator Spatial Data Infrastructure of the Plurinational State of Bolivia's Node

Science.gov (United States)

Molina Rodriguez, Raul Fernando; Lesage, Sylvain

2014-05-01

Started in 2011, the GeoBolivia project (www.geo.gob.bo)aims at building the Spatial Data Infrastructure of the Plurinational State of Bolivia (IDE-EPB by its Spanish initials), as an effort of the Vice Presidency of the State to give an open access to the public geographic information of Bolivia. The first phase of the project has already been completed. It consisted in implementing an infrastructure and a geoportal for accessing the geographic information through WMS, WFS, WCS and CSW services. The project is currently in its second phase dedicated to decentralizing the structure of IDE-EPB and promoting its use throughout the Bolivian State. The whole platform uses free software and open standards. As a complement, an on-line training module was developed to undertake the transfer of the knowledge the project generated. The main software components used in the SDI are: gvSIG, QGis, uDig as GIS desktop clients; PostGreSQL and PostGIS as geographic database management system; geOrchestra as a framework containing the GeoServer map server, the GeoNetwork catalog server and the OpenLayers and Mapfish GIS webclient; MapServer as a map server for generating OpenStreetMap tiles; Debian as operating system; Apache and Tomcat as web servers. Keywords: SDI, Bolivia, GIS, free software, catalog, gvSIG, QGIS, uDig, geOrchestra, OpenLayers, Mapfish, GeoNetwork, MapServer, GeoServer, OGC, WFS, WMS, WCS, CSW, WMC.

Pippi — Painless parsing, post-processing and plotting of posterior and likelihood samples

Science.gov (United States)

Scott, Pat

2012-11-01

Interpreting samples from likelihood or posterior probability density functions is rarely as straightforward as it seems it should be. Producing publication-quality graphics of these distributions is often similarly painful. In this short note I describe pippi, a simple, publicly available package for parsing and post-processing such samples, as well as generating high-quality PDF graphics of the results. Pippi is easily and extensively configurable and customisable, both in its options for parsing and post-processing samples, and in the visual aspects of the figures it produces. I illustrate some of these using an existing supersymmetric global fit, performed in the context of a gamma-ray search for dark matter. Pippi can be downloaded and followed at http://github.com/patscott/pippi.

A smarter way to search, share and utilize open-spatial online data for energy R&D - Custom machine learning and GIS tools in U.S. DOE's virtual data library & laboratory, EDX

Science.gov (United States)

Rose, K.; Bauer, J.; Baker, D.; Barkhurst, A.; Bean, A.; DiGiulio, J.; Jones, K.; Jones, T.; Justman, D.; Miller, R., III; Romeo, L.; Sabbatino, M.; Tong, A.

2017-12-01

As spatial datasets are increasingly accessible through open, online systems, the opportunity to use these resources to address a range of Earth system questions grows. Simultaneously, there is a need for better infrastructure and tools to find and utilize these resources. We will present examples of advanced online computing capabilities, hosted in the U.S. DOE's Energy Data eXchange (EDX), that address these needs for earth-energy research and development. In one study the computing team developed a custom, machine learning, big data computing tool designed to parse the web and return priority datasets to appropriate servers to develop an open-source global oil and gas infrastructure database. The results of this spatial smart search approach were validated against expert-driven, manual search results which required a team of seven spatial scientists three months to produce. The custom machine learning tool parsed online, open systems, including zip files, ftp sites and other web-hosted resources, in a matter of days. The resulting resources were integrated into a geodatabase now hosted for open access via EDX. Beyond identifying and accessing authoritative, open spatial data resources, there is also a need for more efficient tools to ingest, perform, and visualize multi-variate, spatial data analyses. Within the EDX framework, there is a growing suite of processing, analytical and visualization capabilities that allow multi-user teams to work more efficiently in private, virtual workspaces. An example of these capabilities are a set of 5 custom spatio-temporal models and data tools that form NETL's Offshore Risk Modeling suite that can be used to quantify oil spill risks and impacts. Coupling the data and advanced functions from EDX with these advanced spatio-temporal models has culminated with an integrated web-based decision-support tool. This platform has capabilities to identify and combine data across scales and disciplines, evaluate potential environmental

Online platform for applying space–time scan statistics for prospectively detecting emerging hot spots of dengue fever

Directory of Open Access Journals (Sweden)

Chien-Chou Chen

2016-11-01

Full Text Available Abstract Background Cases of dengue fever have increased in areas of Southeast Asia in recent years. Taiwan hit a record-high 42,856 cases in 2015, with the majority in southern Tainan and Kaohsiung Cities. Leveraging spatial statistics and geo-visualization techniques, we aim to design an online analytical tool for local public health workers to prospectively identify ongoing hot spots of dengue fever weekly at the village level. Methods A total of 57,516 confirmed cases of dengue fever in 2014 and 2015 were obtained from the Taiwan Centers for Disease Control (TCDC. Incorporating demographic information as covariates with cumulative cases (365 days in a discrete Poisson model, we iteratively applied space–time scan statistics by SaTScan software to detect the currently active cluster of dengue fever (reported as relative risk in each village of Tainan and Kaohsiung every week. A village with a relative risk >1 and p value <0.05 was identified as a dengue-epidemic area. Assuming an ongoing transmission might continuously spread for two consecutive weeks, we estimated the sensitivity and specificity for detecting outbreaks by comparing the scan-based classification (dengue-epidemic vs. dengue-free village with the true cumulative case numbers from the TCDC’s surveillance statistics. Results Among the 1648 villages in Tainan and Kaohsiung, the overall sensitivity for detecting outbreaks increases as case numbers grow in a total of 92 weekly simulations. The specificity for detecting outbreaks behaves inversely, compared to the sensitivity. On average, the mean sensitivity and specificity of 2-week hot spot detection were 0.615 and 0.891 respectively (p value <0.001 for the covariate adjustment model, as the maximum spatial and temporal windows were specified as 50% of the total population at risk and 28 days. Dengue-epidemic villages were visualized and explored in an interactive map. Conclusions We designed an online analytical tool for

SeriousGeoGames - Geoscience Virtual Reality Experiences for Festival Settings

Science.gov (United States)

Skinner, Christopher

2017-04-01

Festivals, fairs and showcases provide scientists an opportunity to engage with potentially thousands of members of the public in a short space of time. However, the festival setting provides the same members of the public many exhibits competing for their attention - for family groups, this means a successful exhibit must both attract the attention of the group, and also entertain them long enough for the scientist to communicate their message. Here, we will discuss the use of short Virtual Reality (VR) experiences by the SeriousGeoGames project in engaging the public with research in a festival-like setting. SeriousGeoGames uses bespoke, immersive VR experiences to both attract and engage the user. They merge scientific models and/or research field data with popular gaming engines, and present them in VR using the Oculus Rift headset. The experiences are designed to last around four minutes and follow a basic script, although a conversational tone is encouraged. SeriousGeoGames applications have been successfully exhibited at several festivals of different sizes and intended audiences, such as the national-level week-long Cheltenham Science Festival, and the local arts and cultural festival, Hull Freedom Festival. The Flash Flood! application was developed for the Natural Environment Research Council UK (NERC) Flooding from Intense Rainfall (FFIR) programme as a Knowledge Transfer (KT) tool. It was demonstrated at the 5-day NERC Into the blue Science Showcase as one of 38 stands highlighting the UK's cutting edge environmental science research. Over 5000 members of the public attended, and more than 1000 demonstrations of Flash Flood! were made, with 400 booklets handed out. The exhibit received positive feedback from users, and won third prize in a public vote for favourite stand - but this had little visible impact on online metrics of the SeriousGeoGames web presence. In terms of providing a 'positive experience' with science the application was successfully

Parsing and Quantification of Raw Orbitrap Mass Spectrometer Data Using RawQuant.

Science.gov (United States)

Kovalchik, Kevin A; Moggridge, Sophie; Chen, David D Y; Morin, Gregg B; Hughes, Christopher S

2018-06-01

Effective analysis of protein samples by mass spectrometry (MS) requires careful selection and optimization of a range of experimental parameters. As the output from the primary detection device, the "raw" MS data file can be used to gauge the success of a given sample analysis. However, the closed-source nature of the standard raw MS file can complicate effective parsing of the data contained within. To ease and increase the range of analyses possible, the RawQuant tool was developed to enable parsing of raw MS files derived from Thermo Orbitrap instruments to yield meta and scan data in an openly readable text format. RawQuant can be commanded to export user-friendly files containing MS 1 , MS 2 , and MS 3 metadata as well as matrices of quantification values based on isobaric tagging approaches. In this study, the utility of RawQuant is demonstrated in several scenarios: (1) reanalysis of shotgun proteomics data for the identification of the human proteome, (2) reanalysis of experiments utilizing isobaric tagging for whole-proteome quantification, and (3) analysis of a novel bacterial proteome and synthetic peptide mixture for assessing quantification accuracy when using isobaric tags. Together, these analyses successfully demonstrate RawQuant for the efficient parsing and quantification of data from raw Thermo Orbitrap MS files acquired in a range of common proteomics experiments. In addition, the individual analyses using RawQuant highlights parametric considerations in the different experimental sets and suggests targetable areas to improve depth of coverage in identification-focused studies and quantification accuracy when using isobaric tags.

Neural Semantic Parsing by Character-based Translation: Experiments with Abstract Meaning Representations

NARCIS (Netherlands)

van Noord, Rik; Bos, Johannes

2017-01-01

We evaluate the character-level translation method for neural semantic parsing on a large corpus of sentences annotated with Abstract Meaning Representations (AMRs). Using a sequence-to-sequence model, and some trivial preprocessing and postprocessing of AMRs, we obtain a baseline accuracy of 53.1

GeoServer cookbook

CERN Document Server

Iacovella, Stefano

2014-01-01

This book is ideal for GIS experts, developers, and system administrators who have had a first glance at GeoServer and who are eager to explore all its features in order to configure professional map servers. Basic knowledge of GIS and GeoServer is required.

Geostationary Coastal Ecosystem Dynamics Imager (GEO CEDI) for the GEO Coastal and Air Pollution Events (GEO CAPE) Mission. Concept Presentation

Science.gov (United States)

Janz, Scott; Smith, James C.; Mannino, Antonio

2010-01-01

This slide presentation reviews the concepts of the Geostationary Coastal Ecosystem Dynamics Imager (GEO CEDI) which will be used on the GEO Coastal and Air Pollution Events (GEO CAPE) Mission. The primary science requirements require scans of the U.S. Coastal waters 3 times per day during the daylight hours. Included in the overview are presentations about the systems, the optics, the detectors, the mechanical systems, the electromechanical systems, the electrical design, the flight software, the thermal systems, and the contamination prevention requirements.

A hierarchical methodology for urban facade parsing from TLS point clouds

Science.gov (United States)

Li, Zhuqiang; Zhang, Liqiang; Mathiopoulos, P. Takis; Liu, Fangyu; Zhang, Liang; Li, Shuaipeng; Liu, Hao

2017-01-01

The effective and automated parsing of building facades from terrestrial laser scanning (TLS) point clouds of urban environments is an important research topic in the GIS and remote sensing fields. It is also challenging because of the complexity and great variety of the available 3D building facade layouts as well as the noise and data missing of the input TLS point clouds. In this paper, we introduce a novel methodology for the accurate and computationally efficient parsing of urban building facades from TLS point clouds. The main novelty of the proposed methodology is that it is a systematic and hierarchical approach that considers, in an adaptive way, the semantic and underlying structures of the urban facades for segmentation and subsequent accurate modeling. Firstly, the available input point cloud is decomposed into depth planes based on a data-driven method; such layer decomposition enables similarity detection in each depth plane layer. Secondly, the labeling of the facade elements is performed using the SVM classifier in combination with our proposed BieS-ScSPM algorithm. The labeling outcome is then augmented with weak architectural knowledge. Thirdly, least-squares fitted normalized gray accumulative curves are applied to detect regular structures, and a binarization dilation extraction algorithm is used to partition facade elements. A dynamic line-by-line division is further applied to extract the boundaries of the elements. The 3D geometrical façade models are then reconstructed by optimizing facade elements across depth plane layers. We have evaluated the performance of the proposed method using several TLS facade datasets. Qualitative and quantitative performance comparisons with several other state-of-the-art methods dealing with the same facade parsing problem have demonstrated its superiority in performance and its effectiveness in improving segmentation accuracy.

Extending TF1: Argument parsing, function composition, and vectorization

CERN Document Server

Tsang Mang Kin, Arthur Leonard

2017-01-01

In this project, we extend the functionality of the TF1 function class in root. We add argument parsing, making it possible to freely pass variables and parameters into pre-defined and user-defined functions. We also introduce a syntax to use certain compositions of functions, namely normalized sums and convolutions, directly in TF1. Finally, we introduce some simple vectorization functionality to TF1 and demonstrate the potential to speed up parallelizable computations.

KAMUS BAHASA ARAB – INDONESIA ONLINE DENGAN PEMECAHAN SUKU KATA MENGGUNAKAN METODE PARSING

Directory of Open Access Journals (Sweden)

Anny Yuniarti

2004-01-01

Full Text Available Normal 0 false false false IN X-NONE X-NONE MicrosoftInternetExplorer4 /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin:0cm; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"Times New Roman"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;} Kebutuhan umat Islam akan fasilitas penunjang belajar bahasa Arab di Indonesia masih belum terpenuhi dengan optimal. Kamus bahasa Arab yang beredar di pasaran sulit dipahami karena minimnya pengetahuan tentang ilmu tata bahasa Arab di kalangan umat Islam. Pada penelitian ini dikembangkan sebuah perangkat lunak yang berfungsi menerjemahkan kata berbahasa Arab dengan metode parsing sehingga dapat mencakup kata-kata yang telah mengalami perubahan bentuk dari bentuk dasarnya. Karena kata bahasa Arab memiliki turunan kata yang jumlahnya cukup besar, dan supaya kamus efisien, maka tidak semua turunan kata disimpan dalam basisdata. Oleh sebab itu diperlukan suatu cara untuk mengenali pola kata, dan cara mengetahui bentuk dasar suatu kata. Keseluruhan perangkat lunak ini diimplementasikan berbasis web sehingga memudahkan pengaksesan pengguna. Dan pengguna tidak memerlukan proses instalasi perangkat lunak atau sistem operasi tertentu. Pembuatan perangkat lunak ini didahului dengan perancangan proses dan perancangan interface. Kemudian rancangan tersebut diimplementasikan menjadi sebuah perangkat lunak yang siap untuk dipakai. Perangkat lunak yang sudah jadi tersebut telah diuji coba sesuai dengan spesifikasi kebutuhan

Towards a Robuster Interpretive Parsing: learning from overt forms in Optimality Theory

NARCIS (Netherlands)

Biró, T.

2013-01-01

The input data to grammar learning algorithms often consist of overt forms that do not contain full structural descriptions. This lack of information may contribute to the failure of learning. Past work on Optimality Theory introduced Robust Interpretive Parsing (RIP) as a partial solution to this

Tackling Error Propagation through Reinforcement Learning: A Case of Greedy Dependency Parsing

NARCIS (Netherlands)

Le, M.N.; Fokkens, A.S.

Error propagation is a common problem in NLP. Reinforcement learning explores erroneous states during training and can therefore be more robust when mistakes are made early in a process. In this paper, we apply reinforcement learning to greedy dependency parsing which is known to suffer from error

Leveraging social networks for understanding the evolution of epidemics

Science.gov (United States)

2011-01-01

Background To understand how infectious agents disseminate throughout a population it is essential to capture the social model in a realistic manner. This paper presents a novel approach to modeling the propagation of the influenza virus throughout a realistic interconnection network based on actual individual interactions which we extract from online social networks. The advantage is that these networks can be extracted from existing sources which faithfully record interactions between people in their natural environment. We additionally allow modeling the characteristics of each individual as well as customizing his daily interaction patterns by making them time-dependent. Our purpose is to understand how the infection spreads depending on the structure of the contact network and the individuals who introduce the infection in the population. This would help public health authorities to respond more efficiently to epidemics. Results We implement a scalable, fully distributed simulator and validate the epidemic model by comparing the simulation results against the data in the 2004-2005 New York State Department of Health Report (NYSDOH), with similar temporal distribution results for the number of infected individuals. We analyze the impact of different types of connection models on the virus propagation. Lastly, we analyze and compare the effects of adopting several different vaccination policies, some of them based on individual characteristics -such as age- while others targeting the super-connectors in the social model. Conclusions This paper presents an approach to modeling the propagation of the influenza virus via a realistic social model based on actual individual interactions extracted from online social networks. We implemented a scalable, fully distributed simulator and we analyzed both the dissemination of the infection and the effect of different vaccination policies on the progress of the epidemics. The epidemic values predicted by our simulator match

Leveraging social networks for understanding the evolution of epidemics

Directory of Open Access Journals (Sweden)

Martín Gonzalo

2011-12-01

Full Text Available Abstract Background To understand how infectious agents disseminate throughout a population it is essential to capture the social model in a realistic manner. This paper presents a novel approach to modeling the propagation of the influenza virus throughout a realistic interconnection network based on actual individual interactions which we extract from online social networks. The advantage is that these networks can be extracted from existing sources which faithfully record interactions between people in their natural environment. We additionally allow modeling the characteristics of each individual as well as customizing his daily interaction patterns by making them time-dependent. Our purpose is to understand how the infection spreads depending on the structure of the contact network and the individuals who introduce the infection in the population. This would help public health authorities to respond more efficiently to epidemics. Results We implement a scalable, fully distributed simulator and validate the epidemic model by comparing the simulation results against the data in the 2004-2005 New York State Department of Health Report (NYSDOH, with similar temporal distribution results for the number of infected individuals. We analyze the impact of different types of connection models on the virus propagation. Lastly, we analyze and compare the effects of adopting several different vaccination policies, some of them based on individual characteristics -such as age- while others targeting the super-connectors in the social model. Conclusions This paper presents an approach to modeling the propagation of the influenza virus via a realistic social model based on actual individual interactions extracted from online social networks. We implemented a scalable, fully distributed simulator and we analyzed both the dissemination of the infection and the effect of different vaccination policies on the progress of the epidemics. The epidemic values

Process of 3D wireless decentralized sensor deployment using parsing crossover scheme

Directory of Open Access Journals (Sweden)

Albert H.R. Ko

2015-07-01

Full Text Available A Wireless Sensor Networks (WSN usually consists of numerous wireless devices deployed in a region of interest, each able to collect and process environmental information and communicate with neighboring devices. It can thus be regarded as a Multi-Agent System for territorial security, where individual agents cooperate with each other to avoid duplication of effort and to exploit other agent’s capacities. The problem of sensor deployment becomes non-trivial when we consider environmental factors, such as terrain elevations. Due to the fact that all sensors are homogeneous, the chromosomes that encode sensor positions are actually interchangeable, and conventional crossover schemes such as uniform crossover would cause some redundancy as well as over-concentration in certain specific geographical area. We propose a Parsing Crossover Scheme that intends to reduce redundancy and ease geographical concentration pattern in an effort to facilitate the search. The proposed parsing crossover method demonstrates better performances than those of uniform crossover under different terrain irregularities.

An online spatiotemporal prediction model for dengue fever epidemic in Kaohsiung (Taiwan).

Science.gov (United States)

Yu, Hwa-Lung; Angulo, José M; Cheng, Ming-Hung; Wu, Jiaping; Christakos, George

2014-05-01

The emergence and re-emergence of disease epidemics is a complex question that may be influenced by diverse factors, including the space-time dynamics of human populations, environmental conditions, and associated uncertainties. This study proposes a stochastic framework to integrate space-time dynamics in the form of a Susceptible-Infected-Recovered (SIR) model, together with uncertain disease observations, into a Bayesian maximum entropy (BME) framework. The resulting model (BME-SIR) can be used to predict space-time disease spread. Specifically, it was applied to obtain a space-time prediction of the dengue fever (DF) epidemic that took place in Kaohsiung City (Taiwan) during 2002. In implementing the model, the SIR parameters were continually updated and information on new cases of infection was incorporated. The results obtained show that the proposed model is rigorous to user-specified initial values of unknown model parameters, that is, transmission and recovery rates. In general, this model provides a good characterization of the spatial diffusion of the DF epidemic, especially in the city districts proximal to the location of the outbreak. Prediction performance may be affected by various factors, such as virus serotypes and human intervention, which can change the space-time dynamics of disease diffusion. The proposed BME-SIR disease prediction model can provide government agencies with a valuable reference for the timely identification, control, and prevention of DF spread in space and time. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Online Plagiarism Training Falls Short in Biology Classrooms

Science.gov (United States)

Holt, Emily A.; Fagerheim, Britt; Durham, Susan

2014-01-01

Online plagiarism tutorials are increasingly popular in higher education, as faculty and staff try to curb the plagiarism epidemic. Yet no research has validated the efficacy of such tools in minimizing plagiarism in the sciences. Our study compared three plagiarism-avoidance training regimens (i.e., no training, online tutorial, or homework…

Developing a Cloud-Based Online Geospatial Information Sharing and Geoprocessing Platform to Facilitate Collaborative Education and Research

Science.gov (United States)

Yang, Z. L.; Cao, J.; Hu, K.; Gui, Z. P.; Wu, H. Y.; You, L.

2016-06-01

Efficient online discovering and applying geospatial information resources (GIRs) is critical in Earth Science domain as while for cross-disciplinary applications. However, to achieve it is challenging due to the heterogeneity, complexity and privacy of online GIRs. In this article, GeoSquare, a collaborative online geospatial information sharing and geoprocessing platform, was developed to tackle this problem. Specifically, (1) GIRs registration and multi-view query functions allow users to publish and discover GIRs more effectively. (2) Online geoprocessing and real-time execution status checking help users process data and conduct analysis without pre-installation of cumbersome professional tools on their own machines. (3) A service chain orchestration function enables domain experts to contribute and share their domain knowledge with community members through workflow modeling. (4) User inventory management allows registered users to collect and manage their own GIRs, monitor their execution status, and track their own geoprocessing histories. Besides, to enhance the flexibility and capacity of GeoSquare, distributed storage and cloud computing technologies are employed. To support interactive teaching and training, GeoSquare adopts the rich internet application (RIA) technology to create user-friendly graphical user interface (GUI). Results show that GeoSquare can integrate and foster collaboration between dispersed GIRs, computing resources and people. Subsequently, educators and researchers can share and exchange resources in an efficient and harmonious way.

Creating Parsing Lexicons from Semantic Lexicons Automatically and Its Applications

National Research Council Canada - National Science Library

Ayan, Necip F; Dorr, Bonnie

2002-01-01

...). We also present the effects of using such a lexicon on the parser performance. The advantage of automating the process is that the same technique can be applied directly to lexicons we have for other languages, for example, Arabic, Chinese, and Spanish. The results indicate that our method will help us generate parsing lexicons which can be used by a broad-coverage parser that runs on different languages.

Incorporating Parallel Computing into the Goddard Earth Observing System Data Assimilation System (GEOS DAS)

Science.gov (United States)

Larson, Jay W.

1998-01-01

Atmospheric data assimilation is a method of combining actual observations with model forecasts to produce a more accurate description of the earth system than the observations or forecast alone can provide. The output of data assimilation, sometimes called the analysis, are regular, gridded datasets of observed and unobserved variables. Analysis plays a key role in numerical weather prediction and is becoming increasingly important for climate research. These applications, and the need for timely validation of scientific enhancements to the data assimilation system pose computational demands that are best met by distributed parallel software. The mission of the NASA Data Assimilation Office (DAO) is to provide datasets for climate research and to support NASA satellite and aircraft missions. The system used to create these datasets is the Goddard Earth Observing System Data Assimilation System (GEOS DAS). The core components of the the GEOS DAS are: the GEOS General Circulation Model (GCM), the Physical-space Statistical Analysis System (PSAS), the Observer, the on-line Quality Control (QC) system, the Coupler (which feeds analysis increments back to the GCM), and an I/O package for processing the large amounts of data the system produces (which will be described in another presentation in this session). The discussion will center on the following issues: the computational complexity for the whole GEOS DAS, assessment of the performance of the individual elements of GEOS DAS, and parallelization strategy for some of the components of the system.

Epidemic Survivability: Characterizing Networks Under Epidemic-like Failure Propagation Scenarios

DEFF Research Database (Denmark)

Manzano, Marc; Calle, Eusebi; Ripoll, Jordi

2013-01-01

Epidemics theory has been used in different contexts in order to describe the propagation of diseases, human interactions or natural phenomena. In computer science, virus spreading has been also characterized using epidemic models. Although in the past the use of epidemic models...... in telecommunication networks has not been extensively considered, nowadays, with the increasing computation capacity and complexity of operating systems of modern network devices (routers, switches, etc.), the study of possible epidemic-like failure scenarios must be taken into account. When epidemics occur......, such as in other multiple failure scenarios, identifying the level of vulnerability offered by a network is one of the main challenges. In this paper, we present epidemic survivability, a new network measure that describes the vulnerability of each node of a network under a specific epidemic intensity. Moreover...

GEOS. User Tutorials

Energy Technology Data Exchange (ETDEWEB)

Fu, Pengchen [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Settgast, Randolph R. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Johnson, Scott M. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Walsh, Stuart D.C. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Morris, Joseph P. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Ryerson, Frederick J. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

2014-12-17

GEOS is a massively parallel, multi-physics simulation application utilizing high performance computing (HPC) to address subsurface reservoir stimulation activities with the goal of optimizing current operations and evaluating innovative stimulation methods. GEOS enables coupling of di erent solvers associated with the various physical processes occurring during reservoir stimulation in unique and sophisticated ways, adapted to various geologic settings, materials and stimulation methods. Developed at the Lawrence Livermore National Laboratory (LLNL) as a part of a Laboratory-Directed Research and Development (LDRD) Strategic Initiative (SI) project, GEOS represents the culmination of a multi-year ongoing code development and improvement e ort that has leveraged existing code capabilities and sta expertise to design new computational geosciences software.

EarthCube GeoLink: Semantics and Linked Data for the Geosciences

Science.gov (United States)

Arko, R. A.; Carbotte, S. M.; Chandler, C. L.; Cheatham, M.; Fils, D.; Hitzler, P.; Janowicz, K.; Ji, P.; Jones, M. B.; Krisnadhi, A.; Lehnert, K. A.; Mickle, A.; Narock, T.; O'Brien, M.; Raymond, L. M.; Schildhauer, M.; Shepherd, A.; Wiebe, P. H.

2015-12-01

The NSF EarthCube initiative is building next-generation cyberinfrastructure to aid geoscientists in collecting, accessing, analyzing, sharing, and visualizing their data and knowledge. The EarthCube GeoLink Building Block project focuses on a specific set of software protocols and vocabularies, often characterized as the Semantic Web and "Linked Data", to publish data online in a way that is easily discoverable, accessible, and interoperable. GeoLink brings together specialists from the computer science, geoscience, and library science domains, and includes data from a network of NSF-funded repositories that support scientific studies in marine geology, marine ecosystems, biogeochemistry, and paleoclimatology. We are working collaboratively with closely-related Building Block projects including EarthCollab and CINERGI, and solicit feedback from RCN projects including Cyberinfrastructure for Paleogeosciences (C4P) and iSamples. GeoLink has developed a modular ontology that describes essential geoscience research concepts; published data from seven collections (to date) on the Web as geospatially-enabled Linked Data using this ontology; matched and mapped data between collections using shared identifiers for investigators, repositories, datasets, funding awards, platforms, research cruises, physical specimens, and gazetteer features; and aggregated the results in a shared knowledgebase that can be queried via a standard SPARQL endpoint. Client applications have been built around the knowledgebase, including a Web/map-based data browser using the Leaflet JavaScript library and a simple query service using the OpenSearch format. Future development will include extending and refining the GeoLink ontology, adding content from additional repositories, developing semi-automated algorithms to enhance metadata, and further work on client applications.

Mobile device geo-localization and object visualization in sensor networks

Science.gov (United States)

Lemaire, Simon; Bodensteiner, Christoph; Arens, Michael

2014-10-01

In this paper we present a method to visualize geo-referenced objects on modern smartphones using a multi- functional application design. The application applies different localization and visualization methods including the smartphone camera image. The presented application copes well with different scenarios. A generic application work flow and augmented reality visualization techniques are described. The feasibility of the approach is experimentally validated using an online desktop selection application in a network with a modern of-the-shelf smartphone. Applications are widespread and include for instance crisis and disaster management or military applications.

GeoGebra for Mathematical Statistics

Science.gov (United States)

Hewson, Paul

2009-01-01

The GeoGebra software is attracting a lot of interest in the mathematical community, consequently there is a wide range of experience and resources to help use this application. This article briefly outlines how GeoGebra will be of great value in statistical education. The release of GeoGebra is an excellent example of the power of free software…

Maritime Geo-Fence Letter Report

Science.gov (United States)

2016-07-01

1 Classification | CG-926 RDC | author | audience | month year Maritime Geo-Fence Letter Report Authors: Irene Gonin and Gregory...Johnson   Distribution Statement A: Approved for public release; distribution is unlimited. July 2016 Report No. CG-D-10-16 Maritime Geo-Fence...United States Coast Guard Research & Development Center 1 Chelsea Street New London, CT 06320 Maritime Geo-Fence Letter Report 1

geoKepler Workflow Module for Computationally Scalable and Reproducible Geoprocessing and Modeling

Science.gov (United States)

Cowart, C.; Block, J.; Crawl, D.; Graham, J.; Gupta, A.; Nguyen, M.; de Callafon, R.; Smarr, L.; Altintas, I.

2015-12-01

The NSF-funded WIFIRE project has developed an open-source, online geospatial workflow platform for unifying geoprocessing tools and models for for fire and other geospatially dependent modeling applications. It is a product of WIFIRE's objective to build an end-to-end cyberinfrastructure for real-time and data-driven simulation, prediction and visualization of wildfire behavior. geoKepler includes a set of reusable GIS components, or actors, for the Kepler Scientific Workflow System (https://kepler-project.org). Actors exist for reading and writing GIS data in formats such as Shapefile, GeoJSON, KML, and using OGC web services such as WFS. The actors also allow for calling geoprocessing tools in other packages such as GDAL and GRASS. Kepler integrates functions from multiple platforms and file formats into one framework, thus enabling optimal GIS interoperability, model coupling, and scalability. Products of the GIS actors can be fed directly to models such as FARSITE and WRF. Kepler's ability to schedule and scale processes using Hadoop and Spark also makes geoprocessing ultimately extensible and computationally scalable. The reusable workflows in geoKepler can be made to run automatically when alerted by real-time environmental conditions. Here, we show breakthroughs in the speed of creating complex data for hazard assessments with this platform. We also demonstrate geoKepler workflows that use Data Assimilation to ingest real-time weather data into wildfire simulations, and for data mining techniques to gain insight into environmental conditions affecting fire behavior. Existing machine learning tools and libraries such as R and MLlib are being leveraged for this purpose in Kepler, as well as Kepler's Distributed Data Parallel (DDP) capability to provide a framework for scalable processing. geoKepler workflows can be executed via an iPython notebook as a part of a Jupyter hub at UC San Diego for sharing and reporting of the scientific analysis and results from

Towards Precise Metadata-set for Discovering 3D Geospatial Models in Geo-portals

Science.gov (United States)

Zamyadi, A.; Pouliot, J.; Bédard, Y.

2013-09-01

Accessing 3D geospatial models, eventually at no cost and for unrestricted use, is certainly an important issue as they become popular among participatory communities, consultants, and officials. Various geo-portals, mainly established for 2D resources, have tried to provide access to existing 3D resources such as digital elevation model, LIDAR or classic topographic data. Describing the content of data, metadata is a key component of data discovery in geo-portals. An inventory of seven online geo-portals and commercial catalogues shows that the metadata referring to 3D information is very different from one geo-portal to another as well as for similar 3D resources in the same geo-portal. The inventory considered 971 data resources affiliated with elevation. 51% of them were from three geo-portals running at Canadian federal and municipal levels whose metadata resources did not consider 3D model by any definition. Regarding the remaining 49% which refer to 3D models, different definition of terms and metadata were found, resulting in confusion and misinterpretation. The overall assessment of these geo-portals clearly shows that the provided metadata do not integrate specific and common information about 3D geospatial models. Accordingly, the main objective of this research is to improve 3D geospatial model discovery in geo-portals by adding a specific metadata-set. Based on the knowledge and current practices on 3D modeling, and 3D data acquisition and management, a set of metadata is proposed to increase its suitability for 3D geospatial models. This metadata-set enables the definition of genuine classes, fields, and code-lists for a 3D metadata profile. The main structure of the proposal contains 21 metadata classes. These classes are classified in three packages as General and Complementary on contextual and structural information, and Availability on the transition from storage to delivery format. The proposed metadata set is compared with Canadian Geospatial

Geo synthetic-reinforced Pavement systems

International Nuclear Information System (INIS)

Zornberg, J. G.

2014-01-01

Geo synthetics have been used as reinforcement inclusions to improve pavement performance. while there are clear field evidence of the benefit of using geo synthetic reinforcements, the specific conditions or mechanisms that govern the reinforcement of pavements are, at best, unclear and have remained largely unmeasured. Significant research has been recently conducted with the objectives of: (i) determining the relevant properties of geo synthetics that contribute to the enhanced performance of pavement systems, (ii) developing appropriate analytical, laboratory and field methods capable of quantifying the pavement performance, and (iii) enabling the prediction of pavement performance as a function of the properties of the various types of geo synthetics. (Author)

Incremental Learning of Context Free Grammars by Parsing-Based Rule Generation and Rule Set Search

Science.gov (United States)

Nakamura, Katsuhiko; Hoshina, Akemi

This paper discusses recent improvements and extensions in Synapse system for inductive inference of context free grammars (CFGs) from sample strings. Synapse uses incremental learning, rule generation based on bottom-up parsing, and the search for rule sets. The form of production rules in the previous system is extended from Revised Chomsky Normal Form A→βγ to Extended Chomsky Normal Form, which also includes A→B, where each of β and γ is either a terminal or nonterminal symbol. From the result of bottom-up parsing, a rule generation mechanism synthesizes minimum production rules required for parsing positive samples. Instead of inductive CYK algorithm in the previous version of Synapse, the improved version uses a novel rule generation method, called ``bridging,'' which bridges the lacked part of the derivation tree for the positive string. The improved version also employs a novel search strategy, called serial search in addition to minimum rule set search. The synthesis of grammars by the serial search is faster than the minimum set search in most cases. On the other hand, the size of the generated CFGs is generally larger than that by the minimum set search, and the system can find no appropriate grammar for some CFL by the serial search. The paper shows experimental results of incremental learning of several fundamental CFGs and compares the methods of rule generation and search strategies.

The Geochemical Databases GEOROC and GeoReM - What's New?

Science.gov (United States)

Sarbas, B.; Jochum, K. P.; Nohl, U.; Weis, U.

2017-12-01

The geochemical databases GEOROC (http: georoc.mpch-mainz.gwdg.de) and GeoReM (http: georem.mpch-mainz.gwdg.de) are maintained by the Max Planck Institute for Chemistry in Mainz, Germany. Both online databases became crucial tools for geoscientists from different research areas. They are regularly upgraded by new tools and new data from recent publications obtained from a wide range of international journals. GEOROC is a collection of published analyses of volcanic rocks and mantle xenoliths. Since recently, data for plutonic rocks are added. The analyses include major and trace element concentrations, radiogenic and non-radiogenic isotope ratios as well as analytical ages for whole rocks, glasses, minerals and inclusions. Samples come from eleven geological settings and span the whole geological age scale from Archean to Recent. Metadata include, among others, geographic location, rock class and rock type, geological age, degree of alteration, analytical method, laboratory, and reference. The GEOROC web page allows selection of samples by geological setting, geography, chemical criteria, rock or sample name, and bibliographic criteria. In addition, it provides a large number of precompiled files for individual locations, minerals and rock classes. GeoReM is a database collecting information about reference materials of geological and environmental interest, such as rock powders, synthetic and natural glasses as well as mineral, isotopic, biological, river water and seawater reference materials. It contains published data and compilation values (major and trace element concentrations and mass fractions, radiogenic and stable isotope ratios). Metadata comprise, among others, uncertainty, analytical method and laboratory. Reference materials are important for calibration, method validation, quality control and to establish metrological traceability. GeoReM offers six different search strategies: samples or materials (published values), samples (GeoReM preferred

Internet Geo-Location

Science.gov (United States)

2017-12-01

INTERNET GEO-LOCATION DUKE UNIVERSITY DECEMBER 2017 FINAL TECHNICAL REPORT APPROVED FOR PUBLIC RELEASE; DISTRIBUTION UNLIMITED STINFO COPY AIR...REPORT TYPE FINAL TECHNICAL REPORT 3. DATES COVERED (From - To) MAY 2014 – MAY 2017 4. TITLE AND SUBTITLE INTERNET GEO-LOCATION 5a. CONTRACT...of SpeedTest servers that are used by end users to measure the speed of their Internet connection. The servers log the IP address and the location

Learning for Semantic Parsing with Kernels under Various Forms of Supervision

Science.gov (United States)

2007-08-01

natural language sentences to their formal executable meaning representations. This is a challenging problem and is critical for developing computing...sentences are semantically tractable. This indi- cates that Geoquery is more challenging domain for semantic parsing than ATIS. In the past, there have been a...Combining parsers. In Proceedings of the Conference on Em- pirical Methods in Natural Language Processing and Very Large Corpora (EMNLP/ VLC -99), pp. 187–194

Nuclear physics for geo-neutrino studies

International Nuclear Information System (INIS)

Fiorentini, Gianni; Ianni, Aldo; Korga, George; Suvorov, Yury; Lissia, Marcello; Mantovani, Fabio; Miramonti, Lino; Oberauer, Lothar; Obolensky, Michel; Smirnov, Oleg

2010-01-01

Geo-neutrino studies are based on theoretical estimates of geo-neutrino spectra. We propose a method for a direct measurement of the energy distribution of antineutrinos from decays of long-lived radioactive isotopes. We present preliminary results for the geo-neutrinos from 214 Bi decay, a process that accounts for about one-half of the total geo-neutrino signal. The feeding probability of the lowest state of 214 Bi--the most important for geo-neutrino signal--is found to be p 0 =0.177±0.004 (stat) -0.001 +0.003 (sys), under the hypothesis of universal neutrino spectrum shape (UNSS). This value is consistent with the (indirect) estimate of the table of isotopes. We show that achievable larger statistics and reduction of systematics should allow for the testing of possible distortions of the neutrino spectrum from that predicted using the UNSS hypothesis. Implications on the geo-neutrino signal are discussed.

The Geo/Geo/1+1 Queueing System with Negative Customers

OpenAIRE

Ma, Zhanyou; Guo, Yalin; Wang, Pengcheng; Hou, Yumei

2013-01-01

We study a Geo/Geo/1+1 queueing system with geometrical arrivals of both positive and negative customers in which killing strategies considered are removal of customers at the head (RCH) and removal of customers at the end (RCE). Using quasi-birth-death (QBD) process and matrix-geometric solution method, we obtain the stationary distribution of the queue length, the average waiting time of a new arrival customer, and the probabilities of servers in busy or idle period, respectively. Finally, ...

Geo-collaboration under stress

NARCIS (Netherlands)

Looije, R.; Brake, G.M. te; Neerincx, M.A.

2007-01-01

“Most of the science and decision making involved in geo-information is the product of collaborative teams. Current geospatial technologies are a limiting factor because they do not provide any direct support for group efforts. In this paper we present a method to enhance geo-collaboration by

[Brief introduction of geo-authentic herbs].

Science.gov (United States)

Liang, Fei; Li, Jian; Zhang, Wei; Zhang, Rui-Xian

2013-05-01

The science of geo-authentic herbs is a characteristic discipline of traditional Chinese medicine established during thousands of years of clinical practices. It has a long history under the guidance of profound theories of traditional Chinese medicine. The words of "geo-authentic product" were derived from an administrative division unit in the ancient times, which layed stress on the good quality of products in particular regions. In ancient records of traditional Chinese medicine, the words of "geo-authentic product" were first found in Concise Herbal Foundation Compilation of the Ming dynasty, and the words of "geo-authentic herbs" were first discovered in Peony Pavilion of the late Ming dynasty. After all, clinical effect is the fundamental evaluation standard of geo-authentic herbs.

Can Health 2.0 Address Critical Healthcare Challenges? Insights from the Case of How Online Social Networks Can Assist in Combatting the Obesity Epidemic

Directory of Open Access Journals (Sweden)

Janine Hacker

2017-03-01

Full Text Available One of the serious concerns in healthcare in this 21st century is obesity. While the causes of obesity are multifaceted, social networks have been identified as one of the most important dimensions of people's social environment that may influence the adoption of many behaviours, including health-promoting behaviours. In this article, we examine the possibility of harnessing the appeal of online social networks to address the obesity epidemic currently plaguing society. Specifically, a design science research methodology is adopted to design, implement and test the Health 2.0 application called “Calorie Cruncher”. The application is designed specifically to explore the influence of online social networks on individual’s health-related behaviour. In this regard, pilot data collected based on qualitative interviews indicate that online social networks may influence health-related behaviours in several ways. Firstly, they can influence people’s norms and value system that have an impact on their health-related behaviours. Secondly, social control and pressure of social connections may also shape health-related behaviours, and operate implicitly when people make food selection decisions. Thirdly, social relationships may provide emotional support. Our study has implications for research and practice. From a theoretical perspective, the article inductively identifies three factors that influence specific types of health outcomes in the context of obesity. From a practical perspective, the study underscores the benefits of adopting a design science methodology to design and implement a technology solution for a healthcare issue as well as the key role for online social media to assist with health and wellness management and maintenance.

Using machine learning to parse breast pathology reports.

Science.gov (United States)

Yala, Adam; Barzilay, Regina; Salama, Laura; Griffin, Molly; Sollender, Grace; Bardia, Aditya; Lehman, Constance; Buckley, Julliette M; Coopey, Suzanne B; Polubriaginof, Fernanda; Garber, Judy E; Smith, Barbara L; Gadd, Michele A; Specht, Michelle C; Gudewicz, Thomas M; Guidi, Anthony J; Taghian, Alphonse; Hughes, Kevin S

2017-01-01

Extracting information from electronic medical record is a time-consuming and expensive process when done manually. Rule-based and machine learning techniques are two approaches to solving this problem. In this study, we trained a machine learning model on pathology reports to extract pertinent tumor characteristics, which enabled us to create a large database of attribute searchable pathology reports. This database can be used to identify cohorts of patients with characteristics of interest. We collected a total of 91,505 breast pathology reports from three Partners hospitals: Massachusetts General Hospital, Brigham and Women's Hospital, and Newton-Wellesley Hospital, covering the period from 1978 to 2016. We trained our system with annotations from two datasets, consisting of 6295 and 10,841 manually annotated reports. The system extracts 20 separate categories of information, including atypia types and various tumor characteristics such as receptors. We also report a learning curve analysis to show how much annotation our model needs to perform reasonably. The model accuracy was tested on 500 reports that did not overlap with the training set. The model achieved accuracy of 90% for correctly parsing all carcinoma and atypia categories for a given patient. The average accuracy for individual categories was 97%. Using this classifier, we created a database of 91,505 parsed pathology reports. Our learning curve analysis shows that the model can achieve reasonable results even when trained on a few annotations. We developed a user-friendly interface to the database that allows physicians to easily identify patients with target characteristics and export the matching cohort. This model has the potential to reduce the effort required for analyzing large amounts of data from medical records, and to minimize the cost and time required to glean scientific insight from these data.

KEGGParser: parsing and editing KEGG pathway maps in Matlab.

Science.gov (United States)

Arakelyan, Arsen; Nersisyan, Lilit

2013-02-15

KEGG pathway database is a collection of manually drawn pathway maps accompanied with KGML format files intended for use in automatic analysis. KGML files, however, do not contain the required information for complete reproduction of all the events indicated in the static image of a pathway map. Several parsers and editors of KEGG pathways exist for processing KGML files. We introduce KEGGParser-a MATLAB based tool for KEGG pathway parsing, semiautomatic fixing, editing, visualization and analysis in MATLAB environment. It also works with Scilab. The source code is available at http://www.mathworks.com/matlabcentral/fileexchange/37561.

(Invariability in the Samoan syntax/prosody interface and consequences for syntactic parsing

Directory of Open Access Journals (Sweden)

Kristine M. Yu

2017-10-01

Full Text Available While it has long been clear that prosody should be part of the grammar influencing the action of the syntactic parser, how to bring prosody into computational models of syntactic parsing has remained unclear. The challenge is that prosodic information in the speech signal is the result of the interaction of a multitude of conditioning factors. From this output, how can we factor out the contribution of syntax to conditioning prosodic events? And if we are able to do that factorization and define a production model from the syntactic grammar to a prosodified utterance, how can we then define a comprehension model based on that production model? In this case study of the Samoan morphosyntax-prosody interface, we show how to factor out the influence of syntax on prosody in empirical work and confirm there is invariable morphosyntactic conditioning of high edge tones. Then, we show how this invariability can be precisely characterized and used by a parsing model that factors the various influences of morphosyntax on tonal events. We expect that models of these kinds can be extended to more comprehensive perspectives on Samoan and to languages where the syntax/prosody coupling is more complex.

GEO Label Web Services for Dynamic and Effective Communication of Geospatial Metadata Quality

Science.gov (United States)

Lush, Victoria; Nüst, Daniel; Bastin, Lucy; Masó, Joan; Lumsden, Jo

2014-05-01

-like label, which are coloured according to metadata availability and are clickable to allow a user to engage with the original metadata and explore specific aspects in more detail. To support this graphical representation and allow for wider deployment architectures we have implemented two Web services, a PHP and a Java implementation, that generate GEO label representations by combining producer metadata (from standard catalogues or other published locations) with structured user feedback. Both services accept encoded URLs of publicly available metadata documents or metadata XML files as HTTP POST and GET requests and apply XPath and XSLT mappings to transform producer and feedback XML documents into clickable SVG GEO label representations. The label and services are underpinned by two XML-based quality models. The first is a producer model that extends ISO 19115 and 19157 to allow fuller citation of reference data, presentation of pixel- and dataset- level statistical quality information, and encoding of 'traceability' information on the lineage of an actual quality assessment. The second is a user quality model (realised as a feedback server and client) which allows reporting and query of ratings, usage reports, citations, comments and other domain knowledge. Both services are Open Source and are available on GitHub at https://github.com/lushv/geolabel-service and https://github.com/52North/GEO-label-java. The functionality of these services can be tested using our GEO label generation demos, available online at http://www.geolabel.net/demo.html and http://geoviqua.dev.52north.org/glbservice/index.jsf.

FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences.

Science.gov (United States)

Waldmann, Jost; Gerken, Jan; Hankeln, Wolfgang; Schweer, Timmy; Glöckner, Frank Oliver

2014-06-14

Advances in sequencing technologies challenge the efficient importing and validation of FASTA formatted sequence data which is still a prerequisite for most bioinformatic tools and pipelines. Comparative analysis of commonly used Bio*-frameworks (BioPerl, BioJava and Biopython) shows that their scalability and accuracy is hampered. FastaValidator represents a platform-independent, standardized, light-weight software library written in the Java programming language. It targets computer scientists and bioinformaticians writing software which needs to parse quickly and accurately large amounts of sequence data. For end-users FastaValidator includes an interactive out-of-the-box validation of FASTA formatted files, as well as a non-interactive mode designed for high-throughput validation in software pipelines. The accuracy and performance of the FastaValidator library qualifies it for large data sets such as those commonly produced by massive parallel (NGS) technologies. It offers scientists a fast, accurate and standardized method for parsing and validating FASTA formatted sequence data.

Pricing Analysis in Geo/Geo/1 Queueing System

Directory of Open Access Journals (Sweden)

Yan Ma

2015-01-01

Full Text Available This paper studies the equilibrium behavior of customers and optimal pricing strategies of servers in a Geo/Geo/1 queueing system. Two common pricing mechanisms are considered. The first one is called ex-post payment (EPP scheme where the server collects tolls proportional to queue times, and the second one is called ex-ante payment (EAP scheme where the server charges a flat fee for the total service. The server sets the toll price to maximize its own profit. It is found that, under a customer’s choice equilibrium, the two toll mechanisms are equivalent from the economic point of view. Finally, we present several numerical experiments to investigate the effects of system parameters on the equilibrium customer joining rate and servers’ profits.

Parsing the Dictionary of Modern Literary Russian Language with the Method of SCD Configurations. The Lexicographic Modeling

Directory of Open Access Journals (Sweden)

Neculai Curteanu

2012-05-01

Full Text Available This paper extends the experience of parsing other five, sensibly different, Romanian, French, and German largest dictionaries, to \\textbf{\\textit{DMLRL}} (Dictionary of Modern Literary Russian Language [18], using the optimal and portable parsing method of SCD (Segmentation-Cohesion-Dependency configurations [7], [11], [15]. The purpose of the present paper is to elaborate the lexicographic modeling of \\textbf{\\textit{DMLRL}}, which necessarily precedes the sense tree parsing dictionary entries. The following \\textbf{\\textit{three}} SCD configurations are described: the \\textbf{\\textit{first one}} has to separate the lexicographic segments in a \\textbf{\\textit{DMLRL}} entry, the \\textbf{\\textit{second}} SCD-configuration concentrates on the SCD marker classes and their hypergraph hierarchy for \\textbf{\\textit{DMLRL}} primary and secondary senses, while the \\textbf{\\textit{third}} SCD configuration hands down the same modeling process to the atomic sense definitions and their examples-to-definitions. The dependency hypergraph of the third SCD configuration, interconnected to the one of the second SCD configuration, is specified completely at the atomic sense level for the first time, exceeding the SCD configuration modeling for other five dictionaries [15], [14]. Numerous examples from \\textbf{\\textit{DMLRL}} and comparison to \\textbf{\\textit{DLR-DAR}} Romanian thesaurus-dictionary support the proposed \\textbf{\\textit{DMLRL}} lexicographic modeling.

Parsing a cognitive task: a characterization of the mind's bottleneck.

Directory of Open Access Journals (Sweden)

Mariano Sigman

2005-02-01

Full Text Available Parsing a mental operation into components, characterizing the parallel or serial nature of this flow, and understanding what each process ultimately contributes to response time are fundamental questions in cognitive neuroscience. Here we show how a simple theoretical model leads to an extended set of predictions concerning the distribution of response time and its alteration by simultaneous performance of another task. The model provides a synthesis of psychological refractory period and random-walk models of response time. It merely assumes that a task consists of three consecutive stages-perception, decision based on noisy integration of evidence, and response-and that the perceptual and motor stages can operate simultaneously with stages of another task, while the central decision process constitutes a bottleneck. We designed a number-comparison task that provided a thorough test of the model by allowing independent variations in number notation, numerical distance, response complexity, and temporal asynchrony relative to an interfering probe task of tone discrimination. The results revealed a parsing of the comparison task in which each variable affects only one stage. Numerical distance affects the integration process, which is the only step that cannot proceed in parallel and has a major contribution to response time variability. The other stages, mapping the numeral to an internal quantity and executing the motor response, can be carried out in parallel with another task. Changing the duration of these processes has no significant effect on the variance.

The geo-genic radon potential map of the aspiring 'Buzau Land' Geo-park

International Nuclear Information System (INIS)

Moldovan, M. C.; Burghele, B. D.; Roba, C. A.; Sferle, T. L.; Buterez, C.; Mitrofan, H.

2017-01-01

Mapping the geo-genic radon potential in Buzau County is part of a research project aiming to apply research for sustainable development and economic growth following the principles of geo-conservation in order to support the 'Buzau Land' UNESCO Geo-park initiative. The mapping of geo-genic radon will be used as an overview for planning purposes. The main geological formations of the studied area were identified as Cretaceous and Paleogene flysch, included in a thin-skinned nappes pile and consisting of alternating sandstones, marls, clays and, subordinately, conglomerates, all tightly folded or faulted. Significant variations in the concentration of radon were therefore determined in the ground. However, no high values were determined, the maximum measured activity concentration being 101.6 kBq m -3 . (authors)

PyParse: a semiautomated system for scoring spoken recall data.

Science.gov (United States)

Solway, Alec; Geller, Aaron S; Sederberg, Per B; Kahana, Michael J

2010-02-01

Studies of human memory often generate data on the sequence and timing of recalled items, but scoring such data using conventional methods is difficult or impossible. We describe a Python-based semiautomated system that greatly simplifies this task. This software, called PyParse, can easily be used in conjunction with many common experiment authoring systems. Scored data is output in a simple ASCII format and can be accessed with the programming language of choice, allowing for the identification of features such as correct responses, prior-list intrusions, extra-list intrusions, and repetitions.

Geographical structures and the cholera epidemic in modern Japan: Fukushima prefecture in 1882 and 1895

Directory of Open Access Journals (Sweden)

Fukui Hiromichi

2007-06-01

Full Text Available Abstract Background Disease diffusion patterns can provide clues for understanding geographical change. Fukushima, a rural prefecture in northeast Japan, was chosen for a case study of the late nineteenth century cholera epidemic that occurred in that country. Two volumes of Cholera Ryu-ko Kiji (Cholera Epidemic Report, published by the prefectural government in 1882 and 1895, provide valuable records for analyzing and modelling diffusion. Text descriptions and numerical evidence culled from the reports were incorporated into a temporal-spatial study framework using geographic information system (GIS and geo-statistical techniques. Results Changes in diffusion patterns between 1882 and 1895 reflect improvements in the Fukushima transportation system and growth in social-economic networks. The data reveal different diffusion systems in separate regions in which residents of Fukushima and neighboring prefectures interacted. Our model also shows that an area in the prefecture's northern interior was dominated by a mix of diffusion processes (contagious and hierarchical, that the southern coastal region was affected by a contagious process, and that other infected areas experienced relocation diffusion. Conclusion In addition to enhancing our understanding of epidemics, the spatial-temporal patterns of cholera diffusion offer opportunities for studying regional change in modern Japan. By highlighting the dynamics of regional reorganization, our findings can be used to better understand the formation of an urban hierarchy in late nineteenth century Japan.

Motion based parsing for video from observational psychology

Science.gov (United States)

Kokaram, Anil; Doyle, Erika; Lennon, Daire; Joyeux, Laurent; Fuller, Ray

2006-01-01

In Psychology it is common to conduct studies involving the observation of humans undertaking some task. The sessions are typically recorded on video and used for subjective visual analysis. The subjective analysis is tedious and time consuming, not only because much useless video material is recorded but also because subjective measures of human behaviour are not necessarily repeatable. This paper presents tools using content based video analysis that allow automated parsing of video from one such study involving Dyslexia. The tools rely on implicit measures of human motion that can be generalised to other applications in the domain of human observation. Results comparing quantitative assessment of human motion with subjective assessment are also presented, illustrating that the system is a useful scientific tool.

Parsing partial molar volumes of small molecules: a molecular dynamics study.

Science.gov (United States)

Patel, Nisha; Dubins, David N; Pomès, Régis; Chalikian, Tigran V

2011-04-28

We used molecular dynamics (MD) simulations in conjunction with the Kirkwood-Buff theory to compute the partial molar volumes for a number of small solutes of various chemical natures. We repeated our computations using modified pair potentials, first, in the absence of the Coulombic term and, second, in the absence of the Coulombic and the attractive Lennard-Jones terms. Comparison of our results with experimental data and the volumetric results of Monte Carlo simulation with hard sphere potentials and scaled particle theory-based computations led us to conclude that, for small solutes, the partial molar volume computed with the Lennard-Jones potential in the absence of the Coulombic term nearly coincides with the cavity volume. On the other hand, MD simulations carried out with the pair interaction potentials containing only the repulsive Lennard-Jones term produce unrealistically large partial molar volumes of solutes that are close to their excluded volumes. Our simulation results are in good agreement with the reported schemes for parsing partial molar volume data on small solutes. In particular, our determined interaction volumes() and the thickness of the thermal volume for individual compounds are in good agreement with empirical estimates. This work is the first computational study that supports and lends credence to the practical algorithms of parsing partial molar volume data that are currently in use for molecular interpretations of volumetric data.

User Defined Geo-referenced Information

DEFF Research Database (Denmark)

Konstantas, Dimitri; Villalba, Alfredo; di Marzo Serugendo, Giovanna

2009-01-01

. In this paper we present two novel mobile and wireless collaborative services and concepts, the Hovering Information, a mobile, geo-referenced content information management system, and the QoS Information service, providing user observed end-to-end infrastructure geo-related QoS information....

GEOS-5 Chemistry Transport Model User's Guide

Science.gov (United States)

Kouatchou, J.; Molod, A.; Nielsen, J. E.; Auer, B.; Putman, W.; Clune, T.

2015-01-01

The Goddard Earth Observing System version 5 (GEOS-5) General Circulation Model (GCM) makes use of the Earth System Modeling Framework (ESMF) to enable model configurations with many functions. One of the options of the GEOS-5 GCM is the GEOS-5 Chemistry Transport Model (GEOS-5 CTM), which is an offline simulation of chemistry and constituent transport driven by a specified meteorology and other model output fields. This document describes the basic components of the GEOS-5 CTM, and is a user's guide on to how to obtain and run simulations on the NCCS Discover platform. In addition, we provide information on how to change the model configuration input files to meet users' needs.

Publicly Available Geosynchronous (GEO) Space Object Catalog for Future Space Situational Awareness (SSA) Studies

Science.gov (United States)

Koblick, D. C.; Shankar, P.; Xu, S.

Previously, there have been many commercial proposals and extensive academic studies regarding ground and space based sensors to assist a space surveillance network in obtaining metric observations of satellites and debris near Geosynchronous Earth Orbit (GEO). Most use physics based models for geometric constraints, lighting, and tasker/scheduler operations of sensor architectures. Under similar physics modeling assumptions, the space object catalog is often different due to proprietary standards and datasets. Lack of catalog commonality between studies creates barriers and difficulty comparing performance benefits of sensor trades. To solve this problem, we have constructed a future GEO space catalog from publicly available datasets and literature. The annual number of new payloads and rocket bodies is drawn from a Poisson distribution while the growth of the current GEO catalog is bootstrapped from the historical payload, upper stage, and debris data. We adopt a spherically symmetric explosion model and couple it with the NASA standard breakup model to simulate explosions of payloads and rocket bodies as they are the primary drivers of the debris population growth. The cumulative number of fragments follow a power-law distribution. Result from 1,000 random catalog growth simulations indicates that the GEO space object population in the year 2050 will include over 3,600 objects, nearly half of which are debris greater than 10 cm spherical diameter. The number of rocket bodies and dead payloads is projected to nearly double over the next 33 years. For comparison, the current Air Force Space Command catalog snapshot contains fewer than 50 pieces of debris and coarse Radar Cross Section (RCS) estimates which include: small, medium, and large. The current catalog may be sufficient for conjunction studies, but not for analyzing future sensor system performance. The 2050 GEO projected catalog will be available online for commercial/academic research and development.

Framework 'interstitial' oxygen in La10(GeO4)5-(GeO5)O2 apatite electrolyte

International Nuclear Information System (INIS)

Pramana, S.S.; White, T.J.

2007-01-01

Oxygen conduction at low temperatures in apatites make these materials potentially useful as electrolytes in solid-oxide fuel cells, but our understanding of the defect structures enabling ion migration is incomplete. While conduction along [001] channels is dominant, considerable inter-tunnel mobility has been recognized. Using neutron powder diffraction of stoichiometric 'La 10 (GeO 4 ) 6 O 3 ', it has been shown that this compound is more correctly described as an La 10 (GeO 4 ) 5- (GeO 5 )O 2 apatite, in which high concentrations of interstitial oxygen reside within the channel walls. It is suggested that these framework interstitial O atoms provide a reservoir of ions that can migrate into the conducting channels of apatite, via a mechanism of inter-tunnel oxygen diffusion that transiently converts GeO 4 tetrahedra to GeO 5 distorted trigonal bipyramids. This structural modification is consistent with known crystal chemistry and may occur generally in oxide apatites. (orig.)

Analysis of Azari Language based on Parsing using Link Gram

Directory of Open Access Journals (Sweden)

Maryam Arabzadeh

2014-09-01

Full Text Available There are different classes of theories for the natural lanuguage syntactic parsing problem and for creating the related grammars .This paper presents a syntactic grammar developed in the link grammar formalism for Turkish which is an agglutinative language. In the link grammar formalism, the words of a sentence are linked with each other depending on their syntactic roles. Turkish has complex derivational and inflectional morphology, and derivational and inflection morphemes play important syntactic roles in the sentences. In order to develop a link grammar for Turkish, the lexical parts in the morphological representations of Turkish words are removed, and the links are created depending on the part of speech tags and inflectional morphemes in words. Furthermore, a derived word is separated at the derivational boundaries in order to treat each derivation morpheme as a special distinct word, and allow it to be linked with the rest of the sentence. The derivational morphemes of a word are also linked with each other with special links to indicate that they are parts of the same word. Finally the adapted unique link grammar formalism for Turkish provides flexibility for the linkage construction, and similar methods can be used for other languages with complex morphology. Finally, using the Delphi programming language, the link grammar related to the Azeri language was developed and implemented and then by selecting 250 random sentences, this grammar is evaluated and then tested. For 84.31% of the sentences, the result set of the parser contains the correct parse.

GEO portal

Data.gov (United States)

US Agency for International Development — The USAID GeoPortal is a new application that groups web-based capabilities for on-demand discovery of and access to geospatial content, services, expertise, and...

User Experience Design in Professional Map-Based Geo-Portals

Directory of Open Access Journals (Sweden)

Bastian Zimmer

2013-10-01

Full Text Available We have recently been witnessing the growing establishment of map-centered web-based geo-portals on national, regional and local levels. However, a particular issue with these geo-portals is that each instance has been implemented in different ways in terms of design, usability, functionality, interaction possibilities, map size and symbologies. In this paper, we try to tackle these shortcomings by analyzing and formalizing the requirements for map-based geo-portals in a user experience based approach. First, we propose a holistic definition the term of a “geo-portal”. Then, we present our approach to user experience design for map-based geo-portals by defining the functional requirements of a geo-portal, by analyzing previous geo-portal developments, by distilling the results of our empirical user study to perform practically-oriented user requirements, and finally by establishing a set of user experience design guidelines for the creation of map-based geo-portals. These design guidelines have been extracted for each of the main components of a geo-portal, i.e., the map, the search dialogue, the presentation of the search results, symbologies, and other aspects. These guidelines shall constitute the basis for future geo-portal developments to achieve standardization in the user-experience design of map-based geo-portals.

Attribute And-Or Grammar for Joint Parsing of Human Pose, Parts and Attributes.

Science.gov (United States)

Park, Seyoung; Nie, Xiaohan; Zhu, Song-Chun

2017-07-25

This paper presents an attribute and-or grammar (A-AOG) model for jointly inferring human body pose and human attributes in a parse graph with attributes augmented to nodes in the hierarchical representation. In contrast to other popular methods in the current literature that train separate classifiers for poses and individual attributes, our method explicitly represents the decomposition and articulation of body parts, and account for the correlations between poses and attributes. The A-AOG model is an amalgamation of three traditional grammar formulations: (i)Phrase structure grammar representing the hierarchical decomposition of the human body from whole to parts; (ii)Dependency grammar modeling the geometric articulation by a kinematic graph of the body pose; and (iii)Attribute grammar accounting for the compatibility relations between different parts in the hierarchy so that their appearances follow a consistent style. The parse graph outputs human detection, pose estimation, and attribute prediction simultaneously, which are intuitive and interpretable. We conduct experiments on two tasks on two datasets, and experimental results demonstrate the advantage of joint modeling in comparison with computing poses and attributes independently. Furthermore, our model obtains better performance over existing methods for both pose estimation and attribute prediction tasks.

Tackling Error Propagation through Reinforcement Learning: A Case of Greedy Dependency Parsing

OpenAIRE

Le, Minh; Fokkens, Antske

2017-01-01

Error propagation is a common problem in NLP. Reinforcement learning explores erroneous states during training and can therefore be more robust when mistakes are made early in a process. In this paper, we apply reinforcement learning to greedy dependency parsing which is known to suffer from error propagation. Reinforcement learning improves accuracy of both labeled and unlabeled dependencies of the Stanford Neural Dependency Parser, a high performance greedy parser, while maintaining its eff...

Machine learning to parse breast pathology reports in Chinese.

Science.gov (United States)

Tang, Rong; Ouyang, Lizhi; Li, Clara; He, Yue; Griffin, Molly; Taghian, Alphonse; Smith, Barbara; Yala, Adam; Barzilay, Regina; Hughes, Kevin

2018-01-29

Large structured databases of pathology findings are valuable in deriving new clinical insights. However, they are labor intensive to create and generally require manual annotation. There has been some work in the bioinformatics community to support automating this work via machine learning in English. Our contribution is to provide an automated approach to construct such structured databases in Chinese, and to set the stage for extraction from other languages. We collected 2104 de-identified Chinese benign and malignant breast pathology reports from Hunan Cancer Hospital. Physicians with native Chinese proficiency reviewed the reports and annotated a variety of binary and numerical pathologic entities. After excluding 78 cases with a bilateral lesion in the same report, 1216 cases were used as a training set for the algorithm, which was then refined by 405 development cases. The Natural language processing algorithm was tested by using the remaining 405 cases to evaluate the machine learning outcome. The model was used to extract 13 binary entities and 8 numerical entities. When compared to physicians with native Chinese proficiency, the model showed a per-entity accuracy from 91 to 100% for all common diagnoses on the test set. The overall accuracy of binary entities was 98% and of numerical entities was 95%. In a per-report evaluation for binary entities with more than 100 training cases, 85% of all the testing reports were completely correct and 11% had an error in 1 out of 22 entities. We have demonstrated that Chinese breast pathology reports can be automatically parsed into structured data using standard machine learning approaches. The results of our study demonstrate that techniques effective in parsing English reports can be scaled to other languages.

Geo-neutrino review

International Nuclear Information System (INIS)

Tolich, N.

2012-01-01

The principal source of energy for dynamic processes of the earth, such as plate tectonics is thought to come from the radioactive decays of 238 U, 232 Th, and 40 K within the earth. These decays produce electron-antineutrinos, so-called geo-neutrinos, the measurement of which near the earth's surface allows for a direct measure of the total radiogenic heat production in the earth. The KamLAND and Borexino experiments have both measured a geo-neutrino flux significantly greater than zero. As shown in these proceedings, more precise future measurements will significantly constrain earth composition models.

GEO600: status and plans

International Nuclear Information System (INIS)

Willke, B

2007-01-01

The GEO600 gravitational wave detector located near Hannover in Germany is one of the four detectors of the LIGO Scientific Collaboration (LSC). For almost the entire year of 2006, GEO600 participated in the S5 science run of the LSC. Overall an equivalent of about 270 days of science data with an average peak sensitivity of better than 3 x 10 -22 Hz -1/2 have been acquired so far. In this paper, we describe the status of the GEO600 project during the period between January 2006 and February 2007. In addition, plans for the near-term and medium-term future are discussed

Mobile Backend as a Service: the pros and cons of parse

OpenAIRE

Nguyen, Phu

2016-01-01

Using a pre-built backend for an application is an affordable and swift approach to prototyping new application ideas. Mobile Backend as a Service (MBaaS) is the term for pre-built backend systems that developers can use. However, it is advisable to understand the pros and the cons of an MBaaS before deciding to use it. The aim of the thesis was to determine the advantages and disadvantages of using Parse, a provider of mobile backend as a service, in application development. Parse’s defin...

Why Geo-Humanities

Science.gov (United States)

Graells, Robert Casals i.; Sibilla, Anna; Bohle, Martin

2016-04-01

Anthropogenic global change is a composite process. It consists of societal processes (in the 'noosphere') and natural processes (in the 'bio-geosphere'). The 'noosphere' is the ensemble of social, cultural or political insights ('shared subjective mental concepts') of people. Understanding the composite of societal and natural processes ('human geo-biosphere intersections'), which shapes the features of anthropogenic global change, would benefit from a description that draws equally on natural sciences, social sciences and humanities. To that end it is suggested to develop a concept of 'geo-humanities': This essay presents some aspects of its scope, discussing "knowledge that is to manage", "intentions that are to shape", "choices that are to justify" and "complexity that is to handle". Managing knowledge: That people understand anthropogenic global change requires their insights into how 'human geosphere intersections' function. Insights are formed ('processed') in the noosphere by means of interactions between people. Understanding how 'human geosphere intersections' functions combines scientific, engineering and economic studies with studies of the dynamics of the noosphere. Shaping intentions: During the last century anthropogenic global change developed as the collateral outcome of humankind's accumulated actions. It is caused by the number of people, the patterns of their consumption of resources, and the alterations of their environments. Nowadays, anthropogenic global chance is either an intentional negligence or a conscious act. Justifying choices: Humanity has alternatives how to alter Earth at planetary scale consciously. For example, there is a choice to alter the geo-biosphere or to adjust the noosphere. Whatever the choice, it will depend on people's world-views, cultures and preferences. Thus beyond issues whether science and technology are 'sound' overarching societal issues are to tackle, such as: (i) how to appropriate and distribute natural

Bi-static Optical Observations of GEO Objects

Science.gov (United States)

Seitzer, Patrick; Barker, Edwin S.; Cowardin, Heather; Lederer, Susan M.; Buckalew, Brent

2014-01-01

A bi-static study of objects at Geosynchronous Earth Orbit (GEO) was conducted using two ground-based wide-field optical telescopes. The University of Michigan's 0.6-m MODEST (Michigan Orbital Debris Survey Telescope) located at the Cerro Tololo Inter- American Observatory in Chile was employed in a series of coordinated observations with the U.S. Naval Observatory's (USNO) 1.3-m telescope at the USNO Flagstaff Station near Flagstaff, Arizona, USA. The goals of this project are twofold: (1) Obtain optical distances to known and unknown objects at GEO from the difference in the observed topocentric position of objects measured with respect to a reference star frame. The distance can be derived directly from these measurements, and is independent of any orbital solution. The wide geographical separation of these two telescopes means that the parallax difference is larger than ten degrees, and (2) Compare optical photometry in similar filters of GEO objects taken during the same time period from the two sites. The object's illuminated surfaces presented different angles of reflected sunlight to the two telescopes.During a four hour period on the night.of 22 February 2014 (UT), coordinated observations were obtained for eight different GEO positions. Each coordinated observation sequence was started on the hour or half-hour, and was selected to ensure the same cataloged GEO object was available in the field of view of both telescopes during the thirty minute observing sequence. GEO objects were chosen to be both controlled and uncontrolled at a range of orbital inclinations, and the objects were not tracked. Instead both telescopes were operated with all drives off in GEO survey mode to discover un-cataloged objects at GEO. The initial results from this proof-of-concept observing run will be presented, with the intent of laying the foundation for future large-scale bi-static observing campaigns of the GEO regime.

The Case for GEO Hosted SSA Payloads

Science.gov (United States)

Welsch, C.; Armand, B.; Repp, M.; Robinson, A.

2014-09-01

Space situational awareness (SSA) in the geosynchronous earth orbit (GEO) belt presents unique challenges, and given the national importance and high value of GEO satellites, is increasingly critical as space becomes more congested and contested. Space situational awareness capabilities can serve as an effective deterrent against potential adversaries if they provide accurate, timely, and persistent information and are resilient to the threat environment. This paper will demonstrate how simple optical SSA payloads hosted on GEO commercial and government satellites can complement the SSA mission and data provided by Space-Based Space Surveillance (SBSS) and the Geosynchronous Space Situational Awareness Program (GSSAP). GSSAP is built by Orbital Sciences Corporation and launched on July 28, 2014. Analysis performed for this paper will show how GEO hosted SSA payloads, working in combination with SBSS and GSSAP, can increase persistence and timely coverage of high value assets in the GEO belt. The potential to further increase GEO object identification and tracking accuracy by integrating SSA data from multiple sources across different viewing angles including GEO hosted SSA sources will be addressed. Hosting SSA payloads on GEO platforms also increases SSA mission architecture resiliency as the sensors are by distributed across multiple platforms including commercial platforms. This distributed architecture presents a challenging target for an adversary to attempt to degrade or disable. We will present a viable concept of operations to show how data from hosted SSA sensors could be integrated with SBSS and GSSAP data to present a comprehensive and more accurate data set to users. Lastly, we will present an acquisition approach using commercial practices and building on lessons learned from the Commercially Hosted Infra Red Payload CHIRP to demonstrate the affordability of GEO hosted SSA payloads.

compendiumdb: an R package for retrieval and storage of functional genomics data.

Science.gov (United States)

Nandal, Umesh K; van Kampen, Antoine H C; Moerland, Perry D

2016-09-15

Currently, the Gene Expression Omnibus (GEO) contains public data of over 1 million samples from more than 40 000 microarray-based functional genomics experiments. This provides a rich source of information for novel biological discoveries. However, unlocking this potential often requires retrieving and storing a large number of expression profiles from a wide range of different studies and platforms. The compendiumdb R package provides an environment for downloading functional genomics data from GEO, parsing the information into a local or remote database and interacting with the database using dedicated R functions, thus enabling seamless integration with other tools available in R/Bioconductor. The compendiumdb package is written in R, MySQL and Perl. Source code and binaries are available from CRAN (http://cran.r-project.org/web/packages/compendiumdb/) for all major platforms (Linux, MS Windows and OS X) under the GPLv3 license. p.d.moerland@amc.uva.nl Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Topologically Consistent Models for Efficient Big Geo-Spatio Data Distribution

Science.gov (United States)

Jahn, M. W.; Bradley, P. E.; Doori, M. Al; Breunig, M.

2017-10-01

Geo-spatio-temporal topology models are likely to become a key concept to check the consistency of 3D (spatial space) and 4D (spatial + temporal space) models for emerging GIS applications such as subsurface reservoir modelling or the simulation of energy and water supply of mega or smart cities. Furthermore, the data management for complex models consisting of big geo-spatial data is a challenge for GIS and geo-database research. General challenges, concepts, and techniques of big geo-spatial data management are presented. In this paper we introduce a sound mathematical approach for a topologically consistent geo-spatio-temporal model based on the concept of the incidence graph. We redesign DB4GeO, our service-based geo-spatio-temporal database architecture, on the way to the parallel management of massive geo-spatial data. Approaches for a new geo-spatio-temporal and object model of DB4GeO meeting the requirements of big geo-spatial data are discussed in detail. Finally, a conclusion and outlook on our future research are given on the way to support the processing of geo-analytics and -simulations in a parallel and distributed system environment.

Cross-Lingual Dependency Parsing with Late Decoding for Truly Low-Resource Languages

OpenAIRE

Schlichtkrull, Michael Sejr; Søgaard, Anders

2017-01-01

In cross-lingual dependency annotation projection, information is often lost during transfer because of early decoding. We present an end-to-end graph-based neural network dependency parser that can be trained to reproduce matrices of edge scores, which can be directly projected across word alignments. We show that our approach to cross-lingual dependency parsing is not only simpler, but also achieves an absolute improvement of 2.25% averaged across 10 languages compared to the previous state...

The energy geo-policy

International Nuclear Information System (INIS)

Duval, M.

2005-01-01

This analysis updates and develops the analysis of the energy geo-policy proposed by the French Review of geo-policy. In this framework the today policies of the different sate and geographical actors, as suppliers and consumers of petroleum energy, are examined. Then the author analyzes the political problems resulting from, this petroleum energy transfers by earth and sea and the problems resulting specifically from the nuclear energy. The last part brings the author own opinions. (A.L.B.)

Cementation of nuclear graphite using geo-polymers

International Nuclear Information System (INIS)

Girke, N.A.; Steinmetz, H.J.; Bukaemsky, A.; Bosbach, D.; Hermann, E.; Griebel, I.

2012-01-01

Geo-polymers are solid aluminosilicate materials usually formed by alkali hydroxide or alkali silicate activation of solid precursors such as coal fly ash, calcined clay and/or metallurgical slag. Today the primary application of geo-polymer technology is in the development of alternatives to Portland-based cements. Variations in the ratio of aluminium to silicon, and alkali to silicon or addition of structure support, produce geo-polymers with different physical and mechanical properties. These materials have an amorphous three-dimensional structure that gives geo-polymers certain properties, such as fire and acid resistance, low leach rate, which make them an ideal substitute for ordinary Portland cement (OPC) in a wide range of applications especially in conditioning and storage of radioactive waste. Therefore investigations have been initiated about how and to which amount graphite as a hydrophobic material can be mixed with cement or concrete to form stable waste products and which concretes fulfill the specifications at best. As result geo-polymers have been identified as a promising matrix for graphite containing nuclear wastes. With geo-polymers both favorable properties in the cementation process and a high long time structural stability of the products can be achieved. (authors)

Epidemic typhus.

Science.gov (United States)

Bechah, Yassina; Capo, Christian; Mege, Jean-Louis; Raoult, Didier

2008-07-01

Epidemic typhus is transmitted to human beings by the body louse Pediculus humanus corporis. The disease is still considered a major threat by public-health authorities, despite the efficacy of antibiotics, because poor sanitary conditions are conducive to louse proliferation. Until recently, Rickettsia prowazekii, the causal agent, was thought to be confined to human beings and their body lice. Since 1975, R prowazekii infection in human beings has been related to contact with the flying squirrel Glaucomys volans in the USA. Moreover, Brill-Zinsser disease, a relapsed form of epidemic typhus that appears as sporadic cases many years after the initial infection, is unrelated to louse infestation. Stress or a waning immune system are likely to reactivate this earlier persistent infection, which could be the source of new epidemics when conditions facilitate louse infestation. Finally, R prowazekii is a potential category B bioterrorism agent, because it is stable in dried louse faeces and can be transmitted through aerosols. An increased understanding of the pathogenesis of epidemic typhus may be useful for protection against this bacterial threat.

A linked GeoData map for enabling information access

Science.gov (United States)

Powell, Logan J.; Varanka, Dalia E.

2018-01-10

attributed Resource Description Framework (RDF) serializations of linked data for mapping. The proof-of-concept focuses on accessing triple data from visual elements of a geographic map as the interface to the MKB. The map interface is embedded with other essential functions such as SPARQL Protocol and RDF Query Language (SPARQL) data query endpoint services and reasoning capabilities of Apache Marmotta (Apache Software Foundation, 2017). An RDF database of the Geographic Names Information System (GNIS), which contains official names of domestic feature in the United States, was linked to a county data layer from The National Map of the U.S. Geological Survey. The county data are part of a broader Government Units theme offered to the public as Esri shapefiles. The shapefile used to draw the map itself was converted to a geographic-oriented JavaScript Object Notation (JSON) (GeoJSON) format and linked through various properties with a linked geodata version of the GNIS database called “GNIS–LD” (Butler and others, 2016; B. Regalia and others, University of California-Santa Barbara, written commun., 2017). The GNIS–LD files originated in Terse RDF Triple Language (Turtle) format but were converted to a JSON format specialized in linked data, “JSON–LD” (Beckett and Berners-Lee, 2011; Sorny and others, 2014). The GNIS–LD database is composed of roughly three predominant triple data graphs: Features, Names, and History. The graphs include a set of namespace prefixes used by each of the attributes. Predefining the prefixes made the conversion to the JSON–LD format simple to complete because Turtle and JSON–LD are variant specifications of the basic RDF concept.To convert a shapefile into GeoJSON format to capture the geospatial coordinate geometry objects, an online converter, Mapshaper, was used (Bloch, 2013). To convert the Turtle files, a custom converter written in Java reconstructs the files by parsing each grouping of attributes belonging to one subject

Susceptible-infected-susceptible epidemics on networks with general infection and cure times

Science.gov (United States)

Cator, E.; van de Bovenkamp, R.; Van Mieghem, P.

2013-06-01

The classical, continuous-time susceptible-infected-susceptible (SIS) Markov epidemic model on an arbitrary network is extended to incorporate infection and curing or recovery times each characterized by a general distribution (rather than an exponential distribution as in Markov processes). This extension, called the generalized SIS (GSIS) model, is believed to have a much larger applicability to real-world epidemics (such as information spread in online social networks, real diseases, malware spread in computer networks, etc.) that likely do not feature exponential times. While the exact governing equations for the GSIS model are difficult to deduce due to their non-Markovian nature, accurate mean-field equations are derived that resemble our previous N-intertwined mean-field approximation (NIMFA) and so allow us to transfer the whole analytic machinery of the NIMFA to the GSIS model. In particular, we establish the criterion to compute the epidemic threshold in the GSIS model. Moreover, we show that the average number of infection attempts during a recovery time is the more natural key parameter, instead of the effective infection rate in the classical, continuous-time SIS Markov model. The relative simplicity of our mean-field results enables us to treat more general types of SIS epidemics, while offering an easier key parameter to measure the average activity of those general viral agents.

Parsing Heterogeneous Striatal Activity

Directory of Open Access Journals (Sweden)

Kae Nakamura

2017-05-01

Full Text Available The striatum is an input channel of the basal ganglia and is well known to be involved in reward-based decision making and learning. At the macroscopic level, the striatum has been postulated to contain parallel functional modules, each of which includes neurons that perform similar computations to support selection of appropriate actions for different task contexts. At the single-neuron level, however, recent studies in monkeys and rodents have revealed heterogeneity in neuronal activity even within restricted modules of the striatum. Looking for generality in the complex striatal activity patterns, here we briefly survey several types of striatal activity, focusing on their usefulness for mediating behaviors. In particular, we focus on two types of behavioral tasks: reward-based tasks that use salient sensory cues and manipulate outcomes associated with the cues; and perceptual decision tasks that manipulate the quality of noisy sensory cues and associate all correct decisions with the same outcome. Guided by previous insights on the modular organization and general selection-related functions of the basal ganglia, we relate striatal activity patterns on these tasks to two types of computations: implementation of selection and evaluation. We suggest that a parsing with the selection/evaluation categories encourages a focus on the functional commonalities revealed by studies with different animal models and behavioral tasks, instead of a focus on aspects of striatal activity that may be specific to a particular task setting. We then highlight several questions in the selection-evaluation framework for future explorations.

Real-Time Integration of Geo-data in ORM

NARCIS (Netherlands)

Balsters, Herman; Klaver, Chris; Huitema, George B.; Meersman, R; Dillon, T; Herrero, P

2010-01-01

Geographic information (geo-data; i.e., data with a spatial component.) is being used for civil, political, and commercial applications. Modeling geo-data can be involved due to its often very complex structure, hence placing high demands on the modeling language employed. Many geo-applications

Web GIS in practice VI: a demo playlist of geo-mashups for public health neogeographers.

Science.gov (United States)

Boulos, Maged N Kamel; Scotch, Matthew; Cheung, Kei-Hoi; Burden, David

2008-07-18

'Mashup' was originally used to describe the mixing together of musical tracks to create a new piece of music. The term now refers to Web sites or services that weave data from different sources into a new data source or service. Using a musical metaphor that builds on the origin of the word 'mashup', this paper presents a demonstration "playlist" of four geo-mashup vignettes that make use of a range of Web 2.0, Semantic Web, and 3-D Internet methods, with outputs/end-user interfaces spanning the flat Web (two-dimensional - 2-D maps), a three-dimensional - 3-D mirror world (Google Earth) and a 3-D virtual world (Second Life). The four geo-mashup "songs" in this "playlist" are: 'Web 2.0 and GIS (Geographic Information Systems) for infectious disease surveillance', 'Web 2.0 and GIS for molecular epidemiology', 'Semantic Web for GIS mashup', and 'From Yahoo! Pipes to 3-D, avatar-inhabited geo-mashups'. It is hoped that this showcase of examples and ideas, and the pointers we are providing to the many online tools that are freely available today for creating, sharing and reusing geo-mashups with minimal or no coding, will ultimately spark the imagination of many public health practitioners and stimulate them to start exploring the use of these methods and tools in their day-to-day practice. The paper also discusses how today's Web is rapidly evolving into a much more intensely immersive, mixed-reality and ubiquitous socio-experiential Metaverse that is heavily interconnected through various kinds of user-created mashups.

Epidemics spreading in interconnected complex networks

International Nuclear Information System (INIS)

Wang, Y.; Xiao, G.

2012-01-01

We study epidemic spreading in two interconnected complex networks. It is found that in our model the epidemic threshold of the interconnected network is always lower than that in any of the two component networks. Detailed theoretical analysis is proposed which allows quick and accurate calculations of epidemic threshold and average outbreak/epidemic size. Theoretical analysis and simulation results show that, generally speaking, the epidemic size is not significantly affected by the inter-network correlation. In interdependent networks which can be viewed as a special case of interconnected networks, however, impacts of inter-network correlation on the epidemic threshold and outbreak size are more significant. -- Highlights: ► We study epidemic spreading in two interconnected complex networks. ► The epidemic threshold is lower than that in any of the two networks. And Interconnection correlation has impacts on threshold and average outbreak size. ► Detailed theoretical analysis is proposed which allows quick and accurate calculations of epidemic threshold and average outbreak/epidemic size. ► We demonstrated and proved that Interconnection correlation does not affect epidemic size significantly. ► In interdependent networks, impacts of inter-network correlation on the epidemic threshold and outbreak size are more significant.

Epidemics spreading in interconnected complex networks

Energy Technology Data Exchange (ETDEWEB)

Wang, Y. [School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798 (Singapore); Institute of High Performance Computing, Agency for Science, Technology and Research (A-STAR), Singapore 138632 (Singapore); Xiao, G., E-mail: egxxiao@ntu.edu.sg [School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798 (Singapore)

2012-09-03

We study epidemic spreading in two interconnected complex networks. It is found that in our model the epidemic threshold of the interconnected network is always lower than that in any of the two component networks. Detailed theoretical analysis is proposed which allows quick and accurate calculations of epidemic threshold and average outbreak/epidemic size. Theoretical analysis and simulation results show that, generally speaking, the epidemic size is not significantly affected by the inter-network correlation. In interdependent networks which can be viewed as a special case of interconnected networks, however, impacts of inter-network correlation on the epidemic threshold and outbreak size are more significant. -- Highlights: ► We study epidemic spreading in two interconnected complex networks. ► The epidemic threshold is lower than that in any of the two networks. And Interconnection correlation has impacts on threshold and average outbreak size. ► Detailed theoretical analysis is proposed which allows quick and accurate calculations of epidemic threshold and average outbreak/epidemic size. ► We demonstrated and proved that Interconnection correlation does not affect epidemic size significantly. ► In interdependent networks, impacts of inter-network correlation on the epidemic threshold and outbreak size are more significant.

Geo-communication and web-based infrastructure

DEFF Research Database (Denmark)

Brodersen, Lars; Nielsen, Anders

2005-01-01

The role of geo-information and the distribution of geo-information have changed dramatically since the introduction of web-services on the Internet. In the framework of web-services maps should be seen as an index to further geo-information. Maps are no longer an aim in themselves. In this context...... web-services perform the function as index-portals on the basis of geoinformation. The introduction of web-services as index-portals based on geoinformation has changed the conditions for both content and form of geocommunication. A high number of players and interactions (as well as a very high...... number of all kinds of information and combinations of these) characterize web-services, where maps are only a part of the whole. These new conditions demand new ways of modelling the processes leading to geo-communication. One new aspect is the fact that the service providers have become a part...

XAFS study of GeO sub 2 glass under pressure

CERN Document Server

Ohtaka, O; Fukui, H; Murai, K; Okube, M; Takebe, H; Katayama, Y; Utsumi, W

2002-01-01

Using a large-volume high-pressure apparatus, Li sub 2 O-4GeO sub 2 glass and pure GeO sub 2 gel have been compressed to 14 GPa at room temperature and their local structural changes have been investigated by an in situ XAFS (x-ray absorption fine-structure) method. On compression of Li sub 2 O-4GeO sub 2 glass, the Ge-O distance gradually becomes short below 7 GPa, showing the conventional compression of the GeO sub 4 tetrahedron. Abrupt increase in the Ge-O distance occurs between 8 and 10 GPa, which corresponds to the coordination number (CN) changing from 4 to 6. The CN change is completed at 10 GPa. On decompression, the reverse transition occurs gradually below 10 GPa. In contrast to the case for Li sub 2 O-4GeO sub 2 glass, the Ge-O distance in GeO sub 2 gel gradually increases over a pressure range from 2 to 12 GPa, indicating that continuous change in CN occurs. The Ge-O distance at 12 GPa is shorter than that of Li-4GeO sub 2 indicating that the change in CN is not completed even at this pressure. O...

GEOS Code Development Road Map - May, 2013

Energy Technology Data Exchange (ETDEWEB)

Johnson, Scott [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Settgast, Randolph [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Fu, Pengcheng [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Antoun, Tarabay [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Ryerson, F. J. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

2013-05-03

GEOS is a massively parallel computational framework designed to enable HPC-based simulations of subsurface reservoir stimulation activities with the goal of optimizing current operations and evaluating innovative stimulation methods. GEOS will enable coupling of different solvers associated with the various physical processes occurring during reservoir stimulation in unique and sophisticated ways, adapted to various geologic settings, materials and stimulation methods. The overall architecture of the framework includes consistent data structures and will allow incorporation of additional physical and materials models as demanded by future applications. Along with predicting the initiation, propagation and reactivation of fractures, GEOS will also generate a seismic source term that can be linked with seismic wave propagation codes to generate synthetic microseismicity at surface and downhole arrays. Similarly, the output from GEOS can be linked with existing fluid/thermal transport codes. GEOS can also be linked with existing, non-intrusive uncertainty quantification schemes to constrain uncertainty in its predictions and sensitivity to the various parameters describing the reservoir and stimulation operations. We anticipate that an implicit-explicit 3D version of GEOS, including a preliminary seismic source model, will be available for parametric testing and validation against experimental and field data by Oct. 1, 2013.

Geo-Seas: delivering harmonised marine geoscience data on a European scale

Science.gov (United States)

Glaves, Helen; Schaap, Dick

2013-04-01

A large amount of both raw and interpreted marine geoscience data is held by an array of European organisations but its discovery and re-use can be very difficult. The data is stored in a variety of different formats and a range of different nomenclatures, scales and co-ordinate systems are used at the organisational, national and international level. This lack of standardisation hinders the user's ability to locate and access these datasets or to use them in an integrated way. The Geo-Seas project, an EU funded Framework 7 initiative, has addressed these barriers to the re-use of marine geological and geophysical data through the development of an on-line data discovery and access service (http://www.geo-seas.eu). It allows the end user to identify, evaluate and download a range of standardised marine geoscience data sets from 26 federated data centres across 17 European maritime countries. The dedicated portal, which currently provides access to more than 100,000 datasets, has been developed by adopting and adapting the existing technologies, standards and methodologies developed by the SeaDataNet project for the management and delivery of oceanographic data. Through the re-use of this pre-existing architecture including the associated common standards and vocabularies a joint infrastructure for both marine geoscientific and oceanographic data has been created which supports the development of multidisciplinary ocean science. The Geo-Seas project has also brought together and incorporated the metadata services developed by previous EU-funded projects such as EUSeaSed and SEISCAN. The formats of this legacy metadata have not only been used as the basis for developing the Geo-Seas metadatabase but it has also lead to these pre-existing metadata catalogues being upgraded to current international standards. The Geo-Seas initiative has lead to a major improvement in the availability of standardised marine geoscientific data throughout Europe allowing end users better

Kennisagenda Geo-informatie: GISsen met beleid

NARCIS (Netherlands)

Dessing, N.; Lips, F.; Hoogenboom, J.; Vullings, L.A.E.

2009-01-01

LNV wil méér geo-informatie inzetten bij de ontwikkeling en uitvoering van beleid en beleidsnota’s ruimer voorzien van kaartmateriaal. Dit betekent dat geo-informatie vaker moet worden benut om lokale knelpunten, mogelijkheden en de gevolgen van alternatieve oplossingen inzichtelijk te maken. Om dit

Modeling Epidemic Network Failures

DEFF Research Database (Denmark)

Ruepp, Sarah Renée; Fagertun, Anna Manolova

2013-01-01

This paper presents the implementation of a failure propagation model for transport networks when multiple failures occur resulting in an epidemic. We model the Susceptible Infected Disabled (SID) epidemic model and validate it by comparing it to analytical solutions. Furthermore, we evaluate...... the SID model’s behavior and impact on the network performance, as well as the severity of the infection spreading. The simulations are carried out in OPNET Modeler. The model provides an important input to epidemic connection recovery mechanisms, and can due to its flexibility and versatility be used...... to evaluate multiple epidemic scenarios in various network types....

The interaction of parsing rules and argument – Predicate constructions: implications for the structure of the Grammaticon in FunGramKB

Directory of Open Access Journals (Sweden)

María del Carmen Fumero Pérez

2017-07-01

Full Text Available The Functional Grammar Knowledge Base (FunGramKB, (Periñán-Pascual and Arcas-Túnez 2010 is a multipurpose lexico-conceptual knowledge base designed to be used in different Natural Language Processing (NLP tasks. It is complemented with the ARTEMIS (Automatically Representing Text Meaning via an Interlingua–based System application, a parsing device linguistically grounded on Role and Reference Grammar (RRG that transduces natural language fragments into their corresponding grammatical and semantic structures. This paper unveils the different phases involved in its parsing routine, paying special attention to the treatment of argumental constructions. As an illustrative case, we will follow all the steps necessary to effectively parse a For-Benefactive structure within ARTEMIS. This methodology will reveal the necessity to distinguish between Kernel constructs and L1-constructions, since the latter involve a modification of the lexical template of the verb. Our definition of L1-constructions leads to the reorganization of the catalogue of FunGramKB L1-constructions, formerly based on Levin’s (1993 alternations. Accordingly, a rearrangement of the internal configuration of the L1-Constructicon within the Grammaticon is proposed.

Requirements elicitation for geo-information solutions

NARCIS (Netherlands)

Robbi Sluter, Claudia; van Elzakker, Corné P.J.M.; Ivanova, Ivana

2017-01-01

Geo-information solutions can achieve a higher level of quality if they are developed in accordance with a user-centred design that requires definition of the user requirements in the first step of solution construction. We treat a geo-information solution as a system designed to support human-based

Integrated travel network model for studying epidemics: Interplay between journeys and epidemic

Science.gov (United States)

Ruan, Zhongyuan; Wang, Chaoqing; Ming Hui, Pak; Liu, Zonghua

2015-06-01

The ease of travelling between cities has contributed much to globalization. Yet, it poses a threat on epidemic outbreaks. It is of great importance for network science and health control to understand the impact of frequent journeys on epidemics. We stress that a new framework of modelling that takes a traveller’s viewpoint is needed. Such integrated travel network (ITN) model should incorporate the diversity among links as dictated by the distances between cities and different speeds of different modes of transportation, diversity among nodes as dictated by the population and the ease of travelling due to infrastructures and economic development of a city, and round-trip journeys to targeted destinations via the paths of shortest travel times typical of human journeys. An example is constructed for 116 cities in China with populations over one million that are connected by high-speed train services and highways. Epidemic spread on the constructed network is studied. It is revealed both numerically and theoretically that the traveling speed and frequency are important factors of epidemic spreading. Depending on the infection rate, increasing the traveling speed would result in either an enhanced or suppressed epidemic, while increasing the traveling frequency enhances the epidemic spreading.

Glyphosate, Hard Water and Nephrotoxic Metals: Are They the Culprits Behind the Epidemic of Chronic Kidney Disease of Unknown Etiology in Sri Lanka?

Science.gov (United States)

Jayasumana, Channa; Gunatilake, Sarath; Senanayake, Priyantha

2014-01-01

The current chronic kidney disease epidemic, the major health issue in the rice paddy farming areas in Sri Lanka has been the subject of many scientific and political debates over the last decade. Although there is no agreement among scientists about the etiology of the disease, a majority of them has concluded that this is a toxic nephropathy. None of the hypotheses put forward so far could explain coherently the totality of clinical, biochemical, histopathological findings, and the unique geographical distribution of the disease and its appearance in the mid-1990s. A strong association between the consumption of hard water and the occurrence of this special kidney disease has been observed, but the relationship has not been explained consistently. Here, we have hypothesized the association of using glyphosate, the most widely used herbicide in the disease endemic area and its unique metal chelating properties. The possible role played by glyphosate-metal complexes in this epidemic has not been given any serious consideration by investigators for the last two decades. Furthermore, it may explain similar kidney disease epidemics observed in Andra Pradesh (India) and Central America. Although glyphosate alone does not cause an epidemic of chronic kidney disease, it seems to have acquired the ability to destroy the renal tissues of thousands of farmers when it forms complexes with a localized geo environmental factor (hardness) and nephrotoxic metals. PMID:24562182

GeoLab: A Geological Workstation for Future Missions

Science.gov (United States)

Evans, Cynthia; Calaway, Michael; Bell, Mary Sue; Li, Zheng; Tong, Shuo; Zhong, Ye; Dahiwala, Ravi

2014-01-01

The GeoLab glovebox was, until November 2012, fully integrated into NASA's Deep Space Habitat (DSH) Analog Testbed. The conceptual design for GeoLab came from several sources, including current research instruments (Microgravity Science Glovebox) used on the International Space Station, existing Astromaterials Curation Laboratory hardware and clean room procedures, and mission scenarios developed for earlier programs. GeoLab allowed NASA scientists to test science operations related to contained sample examination during simulated exploration missions. The team demonstrated science operations that enhance theThe GeoLab glovebox was, until November 2012, fully integrated into NASA's Deep Space Habitat (DSH) Analog Testbed. The conceptual design for GeoLab came from several sources, including current research instruments (Microgravity Science Glovebox) used on the International Space Station, existing Astromaterials Curation Laboratory hardware and clean room procedures, and mission scenarios developed for earlier programs. GeoLab allowed NASA scientists to test science operations related to contained sample examination during simulated exploration missions. The team demonstrated science operations that enhance the early scientific returns from future missions and ensure that the best samples are selected for Earth return. The facility was also designed to foster the development of instrument technology. Since 2009, when GeoLab design and construction began, the GeoLab team [a group of scientists from the Astromaterials Acquisition and Curation Office within the Astromaterials Research and Exploration Science (ARES) Directorate at JSC] has progressively developed and reconfigured the GeoLab hardware and software interfaces and developed test objectives, which were to 1) determine requirements and strategies for sample handling and prioritization for geological operations on other planetary surfaces, 2) assess the scientific contribution of selective in-situ sample

Integrated Geo Hazard Management System in Cloud Computing Technology

Science.gov (United States)

Hanifah, M. I. M.; Omar, R. C.; Khalid, N. H. N.; Ismail, A.; Mustapha, I. S.; Baharuddin, I. N. Z.; Roslan, R.; Zalam, W. M. Z.

2016-11-01

Geo hazard can result in reducing of environmental health and huge economic losses especially in mountainous area. In order to mitigate geo-hazard effectively, cloud computer technology are introduce for managing geo hazard database. Cloud computing technology and it services capable to provide stakeholder's with geo hazards information in near to real time for an effective environmental management and decision-making. UNITEN Integrated Geo Hazard Management System consist of the network management and operation to monitor geo-hazard disaster especially landslide in our study area at Kelantan River Basin and boundary between Hulu Kelantan and Hulu Terengganu. The system will provide easily manage flexible measuring system with data management operates autonomously and can be controlled by commands to collects and controls remotely by using “cloud” system computing. This paper aims to document the above relationship by identifying the special features and needs associated with effective geohazard database management using “cloud system”. This system later will use as part of the development activities and result in minimizing the frequency of the geo-hazard and risk at that research area.

Using GeoMapApp in the Classroom

Science.gov (United States)

Goodwillie, A. M.

2017-12-01

The GeoMapApp tool has been updated with enhanced functionality that is useful in the classroom. Hosted as a service of the IEDA Facility at Columbia University, GeoMapApp (http://www.geomapapp.org) is a free resource that integrates a wide range of research-grade geoscience data in one intuitive map-based interface. It includes earthquake and volcano data, geological maps, plate tectonic data sets, and a high-resolution topography/bathymetry base map. Users can also import and analyse their own data files. Layering and transparency capabilities allow users to compare multiple data sets at once. The GeoMapApp interface presents data in its proper geospatial context, helping students more easily gain insight and understanding from the data. Simple tools for data manipulation allow students to analyse the data in different ways such as generating profiles and producing visualisations for reports. The new Save Session capability is designed to assist in the classroom: The educator saves a pre-loaded state of GeoMapApp. When shared with the class, the saved session file allows students to open GeoMapApp with exactly the same data sets loaded and the same display parameters chosen thus freeing up valuable time in which students can explore the data. In this presentation, activities related to plate tectonics will be highlighted. One activity helps students investigate plate boundaries by exploring earthquake and volcano locations. Another requires students to calculate the rate of seafloor spreading using crustal age data in various ocean basins. A third uses the GeoMapApp layering technique to explore the influence of geological forces in shaping the landscape. Educators report that using GeoMapApp in the classroom lowers the barriers to data accessibility for students; fosters an increased sense of data "ownership" - GeoMapApp presents the same data in the same tool used by researchers; allows engagement with authentic geoscience data; promotes STEM skills and

A GeoWall with Physics and Astronomy Applications

Science.gov (United States)

Dukes, Phillip; Bruton, Dan

2008-03-01

A GeoWall is a passive stereoscopic projection system that can be used by students, teachers, and researchers for visualization of the structure and dynamics of three-dimensional systems and data. The type of system described here adequately provides 3-D visualization in natural color for large or small groups of viewers. The name ``GeoWall'' derives from its initial development to visualize data in the geosciences.1 An early GeoWall system was developed by Paul Morin at the electronic visualization laboratory at the University of Minnesota and was applied in an introductory geology course in spring of 2001. Since that time, several stereoscopic media, which are applicable to introductory-level physics and astronomy classes, have been developed and released into the public domain. In addition to the GeoWall's application in the classroom, there is considerable value in its use as part of a general science outreach program. In this paper we briefly describe the theory of operation of stereoscopic projection and the basic necessary components of a GeoWall system. Then we briefly describe how we are using a GeoWall as an instructional tool for the classroom and informal astronomy education and in research. Finally, we list sources for several of the free software media in physics and astronomy available for use with a GeoWall system.

GEOS Atmospheric Model: Challenges at Exascale

Science.gov (United States)

Putman, William M.; Suarez, Max J.

2017-01-01

The Goddard Earth Observing System (GEOS) model at NASA's Global Modeling and Assimilation Office (GMAO) is used to simulate the multi-scale variability of the Earth's weather and climate, and is used primarily to assimilate conventional and satellite-based observations for weather forecasting and reanalysis. In addition, assimilations coupled to an ocean model are used for longer-term forecasting (e.g., El Nino) on seasonal to interannual times-scales. The GMAO's research activities, including system development, focus on numerous time and space scales, as detailed on the GMAO website, where they are tabbed under five major themes: Weather Analysis and Prediction; Seasonal-Decadal Analysis and Prediction; Reanalysis; Global Mesoscale Modeling, and Observing System Science. A brief description of the GEOS systems can also be found at the GMAO website. GEOS executes as a collection of earth system components connected through the Earth System Modeling Framework (ESMF). The ESMF layer is supplemented with the MAPL (Modeling, Analysis, and Prediction Layer) software toolkit developed at the GMAO, which facilitates the organization of the computational components into a hierarchical architecture. GEOS systems run in parallel using a horizontal decomposition of the Earth's sphere into processing elements (PEs). Communication between PEs is primarily through a message passing framework, using the message passing interface (MPI), and through explicit use of node-level shared memory access via the SHMEM (Symmetric Hierarchical Memory access) protocol. Production GEOS weather prediction systems currently run at 12.5-kilometer horizontal resolution with 72 vertical levels decomposed into PEs associated with 5,400 MPI processes. Research GEOS systems run at resolutions as fine as 1.5 kilometers globally using as many as 30,000 MPI processes. Looking forward, these systems can be expected to see a 2 times increase in horizontal resolution every two to three years, as well as

Web GIS in practice VI: a demo playlist of geo-mashups for public health neogeographers

Directory of Open Access Journals (Sweden)

Cheung Kei-Hoi

2008-07-01

Full Text Available Abstract 'Mashup' was originally used to describe the mixing together of musical tracks to create a new piece of music. The term now refers to Web sites or services that weave data from different sources into a new data source or service. Using a musical metaphor that builds on the origin of the word 'mashup', this paper presents a demonstration "playlist" of four geo-mashup vignettes that make use of a range of Web 2.0, Semantic Web, and 3-D Internet methods, with outputs/end-user interfaces spanning the flat Web (two-dimensional – 2-D maps, a three-dimensional – 3-D mirror world (Google Earth and a 3-D virtual world (Second Life ®. The four geo-mashup "songs" in this "playlist" are: 'Web 2.0 and GIS (Geographic Information Systems for infectious disease surveillance', 'Web 2.0 and GIS for molecular epidemiology', 'Semantic Web for GIS mashup', and 'From Yahoo! Pipes to 3-D, avatar-inhabited geo-mashups'. It is hoped that this showcase of examples and ideas, and the pointers we are providing to the many online tools that are freely available today for creating, sharing and reusing geo-mashups with minimal or no coding, will ultimately spark the imagination of many public health practitioners and stimulate them to start exploring the use of these methods and tools in their day-to-day practice. The paper also discusses how today's Web is rapidly evolving into a much more intensely immersive, mixed-reality and ubiquitous socio-experiential Metaverse that is heavily interconnected through various kinds of user-created mashups.

Epidemic as a natural process.

Science.gov (United States)

Koivu-Jolma, Mikko; Annila, Arto

2018-05-01

Mathematical epidemiology is a well-recognized discipline to model infectious diseases. It also provides guidance for public health officials to limit outbreaks. Nevertheless, epidemics take societies by surprise every now and then, for example, when the Ebola virus epidemic raged seemingly unrestrained in Western Africa. We provide insight to this capricious character of nature by describing the epidemic as a natural process, i.e., a phenomenon governed by thermodynamics. Our account, based on statistical mechanics of open systems, clarifies that it is impossible to predict accurately epidemic courses because everything depends on everything else. Nonetheless, the thermodynamic theory yields a comprehensive and analytical view of the epidemic. The tenet subsumes various processes in a scale-free manner from the molecular to the societal levels. The holistic view accentuates overarching procedures in arresting and eradicating epidemics. Copyright © 2018 Elsevier Inc. All rights reserved.

Cyber Epidemic Models with Dependences

OpenAIRE

Xu, Maochao; Da, Gaofeng; Xu, Shouhuai

2016-01-01

Studying models of cyber epidemics over arbitrary complex networks can deepen our understanding of cyber security from a whole-system perspective. In this paper, we initiate the investigation of cyber epidemic models that accommodate the {\\em dependences} between the cyber attack events. Due to the notorious difficulty in dealing with such dependences, essentially all existing cyber epidemic models have assumed them away. Specifically, we introduce the idea of Copulas into cyber epidemic mode...

Epidemic mitigation via awareness propagation in communication networks: the role of time scales

Science.gov (United States)

Wang, Huijuan; Chen, Chuyi; Qu, Bo; Li, Daqing; Havlin, Shlomo

2017-07-01

The participation of individuals in multi-layer networks allows for feedback between network layers, opening new possibilities to mitigate epidemic spreading. For instance, the spread of a biological disease such as Ebola in a physical contact network may trigger the propagation of the information related to this disease in a communication network, e.g. an online social network. The information propagated in the communication network may increase the awareness of some individuals, resulting in them avoiding contact with their infected neighbors in the physical contact network, which might protect the population from the infection. In this work, we aim to understand how the time scale γ of the information propagation (speed that information is spread and forgotten) in the communication network relative to that of the epidemic spread (speed that an epidemic is spread and cured) in the physical contact network influences such mitigation using awareness information. We begin by proposing a model of the interaction between information propagation and epidemic spread, taking into account the relative time scale γ. We analytically derive the average fraction of infected nodes in the meta-stable state for this model (i) by developing an individual-based mean-field approximation (IBMFA) method and (ii) by extending the microscopic Markov chain approach (MMCA). We show that when the time scale γ of the information spread relative to the epidemic spread is large, our IBMFA approximation is better compared to MMCA near the epidemic threshold, whereas MMCA performs better when the prevalence of the epidemic is high. Furthermore, we find that an optimal mitigation exists that leads to a minimal fraction of infected nodes. The optimal mitigation is achieved at a non-trivial relative time scale γ, which depends on the rate at which an infected individual becomes aware. Contrary to our intuition, information spread too fast in the communication network could reduce the

The Population of Optically Faint GEO Debris

Science.gov (United States)

Seitzer, Patrick; Barker, Ed; Buckalew, Brent; Burkhardt, Andrew; Cowardin, Heather; Frith, James; Gomez, Juan; Kaleida, Catherine; Lederer, Susan M.; Lee, Chris H.

2016-01-01

The 6.5-m Magellan telescope 'Walter Baade' at the Las Campanas Observatory in Chile has been used for spot surveys of the GEO orbital regime to study the population of optically faint GEO debris. The goal is to estimate the size of the population of GEO debris at sizes much smaller than can be studied with 1-meter class telescopes. Despite the small size of the field of view of the Magellan instrument (diameter 0.5-degree), a significant population of objects fainter than R = 19th magnitude have been found with angular rates consistent with circular orbits at GEO. We compare the size of this population with the numbers of GEO objects found at brighter magnitudes by smaller telescopes. The observed detections have a wide range in characteristics starting with those appearing as short uniform streaks. But there are a substantial number of detections with variations in brightness, flashers, during the 5-second exposure. The duration of each of these flashes can be extremely brief: sometimes less than half a second. This is characteristic of a rapidly tumbling object with a quite variable projected size times albedo. If the albedo is of the order of 0.2, then the largest projected size of these objects is around 10-cm. The data in this paper was collected over the last several years using Magellan's IMACS camera in f/2 mode. The analysis shows the brightness bins for the observed GEO population as well as the periodicity of the flashers. All objects presented are correlated with the catalog: the focus of the paper will be on the uncorrelated, optically faint, objects. The goal of this project is to better characterize the faint debris population in GEO that access to a 6.5-m optical telescope in a superb site can provide.

Multiple routes transmitted epidemics on multiplex networks

International Nuclear Information System (INIS)

Zhao, Dawei; Li, Lixiang; Peng, Haipeng; Luo, Qun; Yang, Yixian

2014-01-01

This letter investigates the multiple routes transmitted epidemic process on multiplex networks. We propose detailed theoretical analysis that allows us to accurately calculate the epidemic threshold and outbreak size. It is found that the epidemic can spread across the multiplex network even if all the network layers are well below their respective epidemic thresholds. Strong positive degree–degree correlation of nodes in multiplex network could lead to a much lower epidemic threshold and a relatively smaller outbreak size. However, the average similarity of neighbors from different layers of nodes has no obvious effect on the epidemic threshold and outbreak size. -- Highlights: •We studies multiple routes transmitted epidemic process on multiplex networks. •SIR model and bond percolation theory are used to analyze the epidemic processes. •We derive equations to accurately calculate the epidemic threshold and outbreak size. •ASN has no effect on the epidemic threshold and outbreak size. •Strong positive DDC leads to a lower epidemic threshold and a smaller outbreak size.

Multiple routes transmitted epidemics on multiplex networks

Energy Technology Data Exchange (ETDEWEB)

Zhao, Dawei [Information Security Center, State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, P.O. Box 145, Beijing 100876 (China); National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876 (China); Shandong Provincial Key Laboratory of Computer Network, Shandong Computer Science Center, Jinan 250014 (China); Li, Lixiang [Information Security Center, State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, P.O. Box 145, Beijing 100876 (China); National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876 (China); Peng, Haipeng, E-mail: penghaipeng@bupt.edu.cn [Information Security Center, State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, P.O. Box 145, Beijing 100876 (China); National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876 (China); Luo, Qun; Yang, Yixian [Information Security Center, State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, P.O. Box 145, Beijing 100876 (China); National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876 (China)

2014-02-01

This letter investigates the multiple routes transmitted epidemic process on multiplex networks. We propose detailed theoretical analysis that allows us to accurately calculate the epidemic threshold and outbreak size. It is found that the epidemic can spread across the multiplex network even if all the network layers are well below their respective epidemic thresholds. Strong positive degree–degree correlation of nodes in multiplex network could lead to a much lower epidemic threshold and a relatively smaller outbreak size. However, the average similarity of neighbors from different layers of nodes has no obvious effect on the epidemic threshold and outbreak size. -- Highlights: •We studies multiple routes transmitted epidemic process on multiplex networks. •SIR model and bond percolation theory are used to analyze the epidemic processes. •We derive equations to accurately calculate the epidemic threshold and outbreak size. •ASN has no effect on the epidemic threshold and outbreak size. •Strong positive DDC leads to a lower epidemic threshold and a smaller outbreak size.

High-content image informatics of the structural nuclear protein NuMA parses trajectories for stem/progenitor cell lineages and oncogenic transformation

International Nuclear Information System (INIS)

Vega, Sebastián L.; Liu, Er; Arvind, Varun; Bushman, Jared; Sung, Hak-Joon; Becker, Matthew L.; Lelièvre, Sophie; Kohn, Joachim; Vidi, Pierre-Alexandre; Moghe, Prabhas V.

2017-01-01

Stem and progenitor cells that exhibit significant regenerative potential and critical roles in cancer initiation and progression remain difficult to characterize. Cell fates are determined by reciprocal signaling between the cell microenvironment and the nucleus; hence parameters derived from nuclear remodeling are ideal candidates for stem/progenitor cell characterization. Here we applied high-content, single cell analysis of nuclear shape and organization to examine stem and progenitor cells destined to distinct differentiation endpoints, yet undistinguishable by conventional methods. Nuclear descriptors defined through image informatics classified mesenchymal stem cells poised to either adipogenic or osteogenic differentiation, and oligodendrocyte precursors isolated from different regions of the brain and destined to distinct astrocyte subtypes. Nuclear descriptors also revealed early changes in stem cells after chemical oncogenesis, allowing the identification of a class of cancer-mitigating biomaterials. To capture the metrology of nuclear changes, we developed a simple and quantitative “imaging-derived” parsing index, which reflects the dynamic evolution of the high-dimensional space of nuclear organizational features. A comparative analysis of parsing outcomes via either nuclear shape or textural metrics of the nuclear structural protein NuMA indicates the nuclear shape alone is a weak phenotypic predictor. In contrast, variations in the NuMA organization parsed emergent cell phenotypes and discerned emergent stages of stem cell transformation, supporting a prognosticating role for this protein in the outcomes of nuclear functions. - Highlights: • High-content analysis of nuclear shape and organization classify stem and progenitor cells poised for distinct lineages. • Early oncogenic changes in mesenchymal stem cells (MSCs) are also detected with nuclear descriptors. • A new class of cancer-mitigating biomaterials was identified based on image

High-content image informatics of the structural nuclear protein NuMA parses trajectories for stem/progenitor cell lineages and oncogenic transformation

Energy Technology Data Exchange (ETDEWEB)

Vega, Sebastián L. [Department of Chemical and Biochemical Engineering, Rutgers University, Piscataway, NJ (United States); Liu, Er; Arvind, Varun [Department of Biomedical Engineering, Rutgers University, Piscataway, NJ (United States); Bushman, Jared [Department of Chemistry and Chemical Biology, New Jersey Center for Biomaterials, Piscataway, NJ (United States); School of Pharmacy, University of Wyoming, Laramie, WY (United States); Sung, Hak-Joon [Department of Chemistry and Chemical Biology, New Jersey Center for Biomaterials, Piscataway, NJ (United States); Department of Biomedical Engineering, Vanderbilt University, Nashville, TN (United States); Becker, Matthew L. [Department of Polymer Science and Engineering, University of Akron, Akron, OH (United States); Lelièvre, Sophie [Department of Basic Medical Sciences, Purdue University, West Lafayette, IN (United States); Kohn, Joachim [Department of Chemistry and Chemical Biology, New Jersey Center for Biomaterials, Piscataway, NJ (United States); Vidi, Pierre-Alexandre, E-mail: pvidi@wakehealth.edu [Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC (United States); Moghe, Prabhas V., E-mail: moghe@rutgers.edu [Department of Chemical and Biochemical Engineering, Rutgers University, Piscataway, NJ (United States); Department of Biomedical Engineering, Rutgers University, Piscataway, NJ (United States)

2017-02-01

Stem and progenitor cells that exhibit significant regenerative potential and critical roles in cancer initiation and progression remain difficult to characterize. Cell fates are determined by reciprocal signaling between the cell microenvironment and the nucleus; hence parameters derived from nuclear remodeling are ideal candidates for stem/progenitor cell characterization. Here we applied high-content, single cell analysis of nuclear shape and organization to examine stem and progenitor cells destined to distinct differentiation endpoints, yet undistinguishable by conventional methods. Nuclear descriptors defined through image informatics classified mesenchymal stem cells poised to either adipogenic or osteogenic differentiation, and oligodendrocyte precursors isolated from different regions of the brain and destined to distinct astrocyte subtypes. Nuclear descriptors also revealed early changes in stem cells after chemical oncogenesis, allowing the identification of a class of cancer-mitigating biomaterials. To capture the metrology of nuclear changes, we developed a simple and quantitative “imaging-derived” parsing index, which reflects the dynamic evolution of the high-dimensional space of nuclear organizational features. A comparative analysis of parsing outcomes via either nuclear shape or textural metrics of the nuclear structural protein NuMA indicates the nuclear shape alone is a weak phenotypic predictor. In contrast, variations in the NuMA organization parsed emergent cell phenotypes and discerned emergent stages of stem cell transformation, supporting a prognosticating role for this protein in the outcomes of nuclear functions. - Highlights: • High-content analysis of nuclear shape and organization classify stem and progenitor cells poised for distinct lineages. • Early oncogenic changes in mesenchymal stem cells (MSCs) are also detected with nuclear descriptors. • A new class of cancer-mitigating biomaterials was identified based on image

The Parsing Syllable Envelopes Test for Assessment of Amplitude Modulation Discrimination Skills in Children: Development, Normative Data, and Test-Retest Reliability Studies.

Science.gov (United States)

Cameron, Sharon; Chong-White, Nicky; Mealings, Kiri; Beechey, Tim; Dillon, Harvey; Young, Taegan

2018-02-01

Intensity peaks and valleys in the acoustic signal are salient cues to syllable structure, which is accepted to be a crucial early step in phonological processing. As such, the ability to detect low-rate (envelope) modulations in signal amplitude is essential to parse an incoming speech signal into smaller phonological units. The Parsing Syllable Envelopes (ParSE) test was developed to quantify the ability of children to recognize syllable boundaries using an amplitude modulation detection paradigm. The envelope of a 750-msec steady-state /a/ vowel is modulated into two or three pseudo-syllables using notches with modulation depths varying between 0% and 100% along an 11-step continuum. In an adaptive three-alternative forced-choice procedure, the participant identified whether one, two, or three pseudo-syllables were heard. Development of the ParSE stimuli and test protocols, and collection of normative and test-retest reliability data. Eleven adults (aged 23 yr 10 mo to 50 yr 9 mo, mean 32 yr 10 mo) and 134 typically developing, primary-school children (aged 6 yr 0 mo to 12 yr 4 mo, mean 9 yr 3 mo). There were 73 males and 72 females. Data were collected using a touchscreen computer. Psychometric functions (PFs) were automatically fit to individual data by the ParSE software. Performance was related to the modulation depth at which syllables can be detected with 88% accuracy (referred to as the upper boundary of the uncertainty region [UBUR]). A shallower PF slope reflected a greater level of uncertainty. Age effects were determined based on raw scores. z Scores were calculated to account for the effect of age on performance. Outliers, and individual data for which the confidence interval of the UBUR exceeded a maximum allowable value, were removed. Nonparametric tests were used as the data were skewed toward negative performance. Across participants, the performance criterion (UBUR) was met with a median modulation depth of 42%. The effect of age on the UBUR was

Paradigm shift from cartography to geo-communication

DEFF Research Database (Denmark)

Brodersen, Lars

2007-01-01

This paper argues that the domain of GIS, cartography, geo-information etc. is facing a paradigm shift. The implication of a paradigm shift is a complete and necessary re-definition of e.g. the philosophical foundation of the system, as well as with a major upgrade and readjustment of procedures......-information is actually not possible at all without having a usage (a project identity and a purpose) in mind. Objective and neutral geo-information does not exist. Therefore the overall philosophy of the geo-domain will be that it is a communication discipline....

Relative clauses as a benchmark for Minimalist parsing

Directory of Open Access Journals (Sweden)

Thomas Graf

2017-07-01

Full Text Available Minimalist grammars have been used recently in a series of papers to explain well-known contrasts in human sentence processing in terms of subtle structural differences. These proposals combine a top-down parser with complexity metrics that relate parsing difficulty to memory usage. So far, though, there has been no large-scale exploration of the space of viable metrics. Building on this earlier work, we compare the ability of 1600 metrics to derive several processing effects observed with relative clauses, many of which have been proven difficult to unify. We show that among those 1600 candidates, a few metrics (and only a few can provide a unified account of all these contrasts. This is a welcome result for two reasons: First, it provides a novel account of extensively studied psycholinguistic data. Second, it significantly limits the number of viable metrics that may be applied to other phenomena, thus reducing theoretical indeterminacy.

Accurate estimation of influenza epidemics using Google search data via ARGO.

Science.gov (United States)

Yang, Shihao; Santillana, Mauricio; Kou, S C

2015-11-24

Accurate real-time tracking of influenza outbreaks helps public health officials make timely and meaningful decisions that could save lives. We propose an influenza tracking model, ARGO (AutoRegression with GOogle search data), that uses publicly available online search data. In addition to having a rigorous statistical foundation, ARGO outperforms all previously available Google-search-based tracking models, including the latest version of Google Flu Trends, even though it uses only low-quality search data as input from publicly available Google Trends and Google Correlate websites. ARGO not only incorporates the seasonality in influenza epidemics but also captures changes in people's online search behavior over time. ARGO is also flexible, self-correcting, robust, and scalable, making it a potentially powerful tool that can be used for real-time tracking of other social events at multiple temporal and spatial resolutions.

Kennisagenda Geo-informatie: GISsen met beleid

OpenAIRE

Dessing, N.; Lips, F.; Hoogenboom, J.; Vullings, L.A.E.

2009-01-01

LNV wil méér geo-informatie inzetten bij de ontwikkeling en uitvoering van beleid en beleidsnota’s ruimer voorzien van kaartmateriaal. Dit betekent dat geo-informatie vaker moet worden benut om lokale knelpunten, mogelijkheden en de gevolgen van alternatieve oplossingen inzichtelijk te maken. Om dit te bereiken moet de beschikbaarheid van adequate data en gebruikersvriendelijke en nieuwe GIS-technieken aanmerkelijk verbeteren.

Geo-registration of Unprofessional and Weakly-related Image and Precision Evaluation

Directory of Open Access Journals (Sweden)

LIU Yingzhen

2015-09-01

Full Text Available The 3D geo-spatial model built by unprofessional and weakly-related image is a significant source of geo-spatial information. The unprofessional and weakly-related image cannot be useful geo-spatial information until be geo-registered with accurate geo-spatial orientation and location. In this paper, we present an automatic geo-registration using the coordination acquired by real-time GPS module. We calculate 2D and 3D spatial transformation parameters based on the spatial similarity between the image location in the geo-spatial coordination system and in the 3D reconstruction coordination system. Because of the poor precision of GPS information and especially the unstability of elevation measurement, we use RANSAC algorithm to get rid of outliers. In the experiment, we compare the geo-registered image positions to their differential GPS coordinates. The errors of translation, rotation and scaling are evaluated quantitively and the causes of bad result are analyzed. The experiment demonstrates that this geo-registration method can get a precise result with enough images.

Online handwritten mathematical expression recognition

Science.gov (United States)

Büyükbayrak, Hakan; Yanikoglu, Berrin; Erçil, Aytül

2007-01-01

We describe a system for recognizing online, handwritten mathematical expressions. The system is designed with a user-interface for writing scientific articles, supporting the recognition of basic mathematical expressions as well as integrals, summations, matrices etc. A feed-forward neural network recognizes symbols which are assumed to be single-stroke and a recursive algorithm parses the expression by combining neural network output and the structure of the expression. Preliminary results show that writer-dependent recognition rates are very high (99.8%) while writer-independent symbol recognition rates are lower (75%). The interface associated with the proposed system integrates the built-in recognition capabilities of the Microsoft's Tablet PC API for recognizing textual input and supports conversion of hand-drawn figures into PNG format. This enables the user to enter text, mathematics and draw figures in a single interface. After recognition, all output is combined into one LATEX code and compiled into a PDF file.

Characterisation of irradiation effect on geo-polymers

International Nuclear Information System (INIS)

Chupin, Frederic

2015-01-01

This study aims to improve knowledge about the radiation effect on geo-polymer behavior in terms of dihydrogen release and general strength in order to consider them as an alternative to usual nuclear waste cementitious coating matrices. Using various characterization techniques (nitrogen adsorption, low temperature DSC, FTIR and 1 H NMR spectroscopy) and by means of simulation irradiations (gamma, heavy ions), it has been shown that all the water present in the geo-polymer could be radiolyzed and that there was a confinement effect on the water radiolysis under low LET irradiation, probably due to efficient energy transfers from the solid matrix to the interstitial solution. Three dihydrogen production rates have been identified with the absorbed dose, depending on the concentration of dissolved dioxygen and the dihydrogen accumulation in the geo-polymer matrix. The good mechanical strength of the geo-polymer has been shown up to 9 MGy under gamma irradiation and is due to its high stability under irradiation. This could be explained by the fast recombination of the defects observed by EPR spectroscopy. However, phase crystallization was revealed during irradiation with heavy ions, which may induce some weakening of the geo-polymer network under alpha irradiation. The overall results helped to understand the phenomenology in a waste package under storage conditions. (author) [fr

GeoPro: Technology to Enable Scientific Modeling

International Nuclear Information System (INIS)

C. Juan

2004-01-01

Development of the ground-water flow model for the Death Valley Regional Groundwater Flow System (DVRFS) required integration of numerous supporting hydrogeologic investigations. The results from recharge, discharge, hydraulic properties, water level, pumping, model boundaries, and geologic studies were integrated to develop the required conceptual and 3-D framework models, and the flow model itself. To support the complex modeling process and the needs of the multidisciplinary DVRFS team, a hardware and software system called GeoPro (Geoscience Knowledge Integration Protocol) was developed. A primary function of GeoPro is to manage the large volume of disparate data compiled for the 100,000-square-kilometer area of southern Nevada and California. The data are primarily from previous investigations and regional flow models developed for the Nevada Test Site and Yucca Mountain projects. GeoPro utilizes relational database technology (Microsoft SQL Server(trademark)) to store and manage these tabular point data, groundwater flow model ASCII data, 3-D hydrogeologic framework data, 2-D and 2.5-D GIS data, and text documents. Data management consists of versioning, tracking, and reporting data changes as multiple users access the centralized database. GeoPro also supports the modeling process by automating the routine data transformations required to integrate project software. This automation is also crucial to streamlining pre- and post-processing of model data during model calibration. Another function of GeoPro is to facilitate the dissemination and use of the model data and results through web-based documents by linking and allowing access to the underlying database and analysis tools. The intent is to convey to end-users the complex flow model product in a manner that is simple, flexible, and relevant to their needs. GeoPro is evolving from a prototype system to a production-level product. Currently the DVRFS pre- and post-processing modeling tools are being re

Economic cost and burden of dengue during epidemics and non-epidemic years in Taiwan

Directory of Open Access Journals (Sweden)

Dih-Ling Luh

2018-03-01

Full Text Available Background: Determining the disease and economic burden of dengue is critical for the allocation of public health resources. Several studies have used disability-adjusted life-years (DALYs to estimate the disease burden of dengue in different regions. However, there are no published studies discussing the estimates of dengue-related economic and disease burden specifically in Taiwan. Objectives: We assessed the economic cost and disease burden of dengue infections in Taiwan for the period 1998–2014, and compared these during epidemic and non-epidemic years. Methods: We estimated the annual DALYs per million population using the disability weights for dengue fever (DF, dengue hemorrhagic fever (DHF, dengue shock syndrome (DSS, and death cases. Economic costs were estimated and divided into direct (medical costs and indirect costs (lost work days and caregiver fees. Results: For the period 1998–2014, a mean of 115.3 (range: 6.3–934.3 DALYs per million population annually were lost to dengue. In epidemic years, direct costs associated with dengue resulted mostly from hospitalization (86.09%, emergency (7.77%, outpatient (6.10%, and drug costs (0.03%. For indirect costs, lost productivity due to death (70.76% was the dominant contributor. Overall, the costs were 12.3 times higher in epidemic years than in non-epidemic years (Wilcoxon rank sum test, p < 0.05. Conclusions: This study is the first to evaluate the economic costs and disease burden of dengue infections for this period in Taiwan, and reveals significant differences in economic impact between epidemic and non-epidemic years. Keywords: Economic cost of disease, Disease burden, Disability-adjusted life years (DALYs, Dengue, Epidemic

The Key Driving Forces for Geo-Economic Relationships between China and ASEAN Countries

Directory of Open Access Journals (Sweden)

Shufang Wang

2017-12-01

Full Text Available With the rise of China and the implementation of the “21st Century Maritime Silk Road” strategy, research on geo-economics between China and ASEAN (Association of Southeast Asian Nations countries has become increasingly important. Current studies mainly focus on influencing factors, while there is little consideration about how these influencing factors act on geo-economic relationships. Therefore, this paper explores the key driving forces for geo-economic relationships between China and ASEAN countries by use of the structural equation modeling based on Partial Lease Squares. There are three main findings: (1 Economic factors have the greatest impact on geo-economic relationships and the total path effect is 0.778. Geo-location, geopolitics and geo-culture act on geo-economic relationships directly and indirectly. Their total path effects are 0.731, 0.645 and 0.513, respectively. (2 Indirect effects of geo-location, geopolitics and geo-culture impacting geo-economic relationships are far greater than direct effects. Geo-culture, in particular, has a vital mediating effect on geo-economic relationships. (3 Economic drivers promote geo-economic relationships through market, industrial policy, technical, network and benefit-sharing mechanisms. Political drivers improve geo-economic relationships through cooperation, negotiation, coordination and institutional mechanisms. Cultural drivers enhance geo-economic relationships through transmission mechanism. Location drivers facilitate geo-economic relationships through selection mechanism. We provide new insights on the geo-economic relationships through quantitative analysis and enrich the existing literature by revealing the key driving forces and mechanisms for geo-economic relationships.

Global HIV/AIDS Epidemic

Science.gov (United States)

... Policy The Global HIV/AIDS Epidemic The Global HIV/AIDS Epidemic Published: Nov 29, 2017 Facebook Twitter ... 2001-FY 2018 Request The Global Response to HIV/AIDS International efforts to combat HIV began in ...

Tracking social contact networks with online respondent-driven detection : who recruits whom?

NARCIS (Netherlands)

Stein, Mart L.; van der Heijden, P.G.M.; Buskens, V.W.; van Steenbergen, Jim E.; Bengtsson, Linus; Koppeschaar, Carl E.; Thorson, Anna E.; Kretzschmar, Mirjam E. E.

2015-01-01

Background: Transmission of respiratory pathogens in a population depends on the contact network patterns of individuals. To accurately understand and explain epidemic behaviour information on contact networks is required, but only limited empirical data is available. Online respondent-driven

Tracking social contact networks with online respondent-driven detection : who recruits whom?

NARCIS (Netherlands)

Stein, Mart L; van der Heijden, Peter G M; Buskens, Vincent; van Steenbergen, Jim E; Bengtsson, Linus; Koppeschaar, Carl E; Thorson, Anna; Kretzschmar, MEE

2015-01-01

BACKGROUND: Transmission of respiratory pathogens in a population depends on the contact network patterns of individuals. To accurately understand and explain epidemic behaviour information on contact networks is required, but only limited empirical data is available. Online respondent-driven

Epidemic modeling in complex realities.

Science.gov (United States)

Colizza, Vittoria; Barthélemy, Marc; Barrat, Alain; Vespignani, Alessandro

2007-04-01

In our global world, the increasing complexity of social relations and transport infrastructures are key factors in the spread of epidemics. In recent years, the increasing availability of computer power has enabled both to obtain reliable data allowing one to quantify the complexity of the networks on which epidemics may propagate and to envision computational tools able to tackle the analysis of such propagation phenomena. These advances have put in evidence the limits of homogeneous assumptions and simple spatial diffusion approaches, and stimulated the inclusion of complex features and heterogeneities relevant in the description of epidemic diffusion. In this paper, we review recent progresses that integrate complex systems and networks analysis with epidemic modelling and focus on the impact of the various complex features of real systems on the dynamics of epidemic spreading.

A novel insight into beaconless geo-routing

KAUST Repository

Bader, Ahmed

2012-12-01

Beaconless geo-routing protocols have been traditionally analyzed assuming equal communication ranges for the data and control packets. This is not true in reality, since the communication range is in practice function of the packet length. As a consequence, a substantial discrepancy may exist between analytical and empirical results offered in beaconless geo-routing literature. Furthermore, performance of beaconless geo-routing protocols has typically considered using single-hop metrics only. End-to-end performance is considered in literature only occasionally and mainly in terms of simulation only. In this paper, we re-examine this class of protocols. We first incorporate practical packet detection models in order to capture the dependency of the communication range on the packet\\'s length. We then develop a detailed analytical framework for the end-to-end delay and energy performance of beaconless geo-routing protocols. Finally, we present two different application scenarios and study various tradeoffs in light of the framework developed. © 2012 IEEE.

Parameter Scaling for Epidemic Size in a Spatial Epidemic Model with Mobile Individuals.

Directory of Open Access Journals (Sweden)

Chiyori T Urabe

Full Text Available In recent years, serious infectious diseases tend to transcend national borders and widely spread in a global scale. The incidence and prevalence of epidemics are highly influenced not only by pathogen-dependent disease characteristics such as the force of infection, the latent period, and the infectious period, but also by human mobility and contact patterns. However, the effect of heterogeneous mobility of individuals on epidemic outcomes is not fully understood. Here, we aim to elucidate how spatial mobility of individuals contributes to the final epidemic size in a spatial susceptible-exposed-infectious-recovered (SEIR model with mobile individuals in a square lattice. After illustrating the interplay between the mobility parameters and the other parameters on the spatial epidemic spreading, we propose an index as a function of system parameters, which largely governs the final epidemic size. The main contribution of this study is to show that the proposed index is useful for estimating how parameter scaling affects the final epidemic size. To demonstrate the effectiveness of the proposed index, we show that there is a positive correlation between the proposed index computed with the real data of human airline travels and the actual number of positive incident cases of influenza B in the entire world, implying that the growing incidence of influenza B is attributed to increased human mobility.

Sistem Monitoring Online Kualitas Air Akuakultur untuk Tambak Udang Menggunakan Aplikasi Berbasis Android

Directory of Open Access Journals (Sweden)

Priyani Kusrini

2016-12-01

Full Text Available Pemantauan kualitas air di tambak udang yang efektif sangat dibutuhkan agar produksi udang meningkat. Oleh karena itu, pada penelitian ini telah dibuat aplikasi sistem online monitoring kualitas air tambak udang berbasis android. Pengambilan data parameter sensor dilakukan di kampus LIPI menggunakan stasiun sensor yang datanya ditransmisikan ke data logger untuk selanjutnya dikirimkan ke website. Data yang diperoleh dari website berupa data php (Hyper Text Preprocessor dan kemudian diubah menjadi data JSON (Java Script Object Notation. Parsing data dilakukan dengan menggunakan fungsi json_encode untuk membuat string JSON dari objek dan array sehingga data dapat dibaca di Android Studio. Aplikasi ini sangat mudah dioperasikan dan sangat efisien.

Epidemics spread in heterogeneous populations

Science.gov (United States)

Capała, Karol; Dybiec, Bartłomiej

2017-05-01

Individuals building populations are subject to variability. This variability affects progress of epidemic outbreaks, because individuals tend to be more or less resistant. Individuals also differ with respect to their recovery rate. Here, properties of the SIR model in inhomogeneous populations are studied. It is shown that a small change in model's parameters, e.g. recovery or infection rate, can substantially change properties of final states which is especially well-visible in distributions of the epidemic size. In addition to the epidemic size and radii distributions, the paper explores first passage time properties of epidemic outbreaks.

Detection of Severe Respiratory Disease Epidemic Outbreaks by CUSUM-Based Overcrowd-Severe-Respiratory-Disease-Index Model

Directory of Open Access Journals (Sweden)

Carlos Polanco

2013-01-01

Full Text Available A severe respiratory disease epidemic outbreak correlates with a high demand of specific supplies and specialized personnel to hold it back in a wide region or set of regions; these supplies would be beds, storage areas, hemodynamic monitors, and mechanical ventilators, as well as physicians, respiratory technicians, and specialized nurses. We describe an online cumulative sum based model named Overcrowd-Severe-Respiratory-Disease-Index based on the Modified Overcrowd Index that simultaneously monitors and informs the demand of those supplies and personnel in a healthcare network generating early warnings of severe respiratory disease epidemic outbreaks through the interpretation of such variables. A post hoc historical archive is generated, helping physicians in charge to improve the transit and future allocation of supplies in the entire hospital network during the outbreak. The model was thoroughly verified in a virtual scenario, generating multiple epidemic outbreaks in a 6-year span for a 13-hospital network. When it was superimposed over the H1N1 influenza outbreak census (2008–2010 taken by the National Institute of Medical Sciences and Nutrition Salvador Zubiran in Mexico City, it showed that it is an effective algorithm to notify early warnings of severe respiratory disease epidemic outbreaks with a minimal rate of false alerts.

Detection of Severe Respiratory Disease Epidemic Outbreaks by CUSUM-Based Overcrowd-Severe-Respiratory-Disease-Index Model

Science.gov (United States)

Castañón-González, Jorge Alberto; Macías, Alejandro E.; Samaniego, José Lino; Buhse, Thomas; Villanueva-Martínez, Sebastián

2013-01-01

A severe respiratory disease epidemic outbreak correlates with a high demand of specific supplies and specialized personnel to hold it back in a wide region or set of regions; these supplies would be beds, storage areas, hemodynamic monitors, and mechanical ventilators, as well as physicians, respiratory technicians, and specialized nurses. We describe an online cumulative sum based model named Overcrowd-Severe-Respiratory-Disease-Index based on the Modified Overcrowd Index that simultaneously monitors and informs the demand of those supplies and personnel in a healthcare network generating early warnings of severe respiratory disease epidemic outbreaks through the interpretation of such variables. A post hoc historical archive is generated, helping physicians in charge to improve the transit and future allocation of supplies in the entire hospital network during the outbreak. The model was thoroughly verified in a virtual scenario, generating multiple epidemic outbreaks in a 6-year span for a 13-hospital network. When it was superimposed over the H1N1 influenza outbreak census (2008–2010) taken by the National Institute of Medical Sciences and Nutrition Salvador Zubiran in Mexico City, it showed that it is an effective algorithm to notify early warnings of severe respiratory disease epidemic outbreaks with a minimal rate of false alerts. PMID:24069063

Rheological behavior of alkali-activated metakaolin during geo-polymerization

International Nuclear Information System (INIS)

Poulesquen, A.; Frizon, F.; Lambertin, D.

2011-01-01

The dynamic rheological behavior of geo-polymers, inorganic materials synthesized by activation of an aluminosilicate source by an alkaline solution, is described. The pastes studied were mixtures of an activation solution (alkali + silica) and metakaolin. The influence of the activation solution (NaOH vs. KOH), the silica (Aerosil vs. Tixosil), and the temperature on the evolution of the elastic modulus (G') and viscous modulus (G') over time were studied in the linear viscoelastic range. The results show that the nature of the silica has little influence on the viscous and elastic moduli when the geo-polymer is activated by KOH, and that the setting time is faster with sodium hydroxide and at higher temperatures regardless of the geo-polymer. In addition, during geo-polymerization the stepwise variation of the modulus values indicates that the formation of the 3D network occurs in several steps. Moreover, geo-polymers activated by potassium hydroxide exhibit slower kinetics but the interactions between constituents are stronger, as the loss tangent (tanδ = G''/G') is lower. Finally, the maximum loss tangent, tanδ, was also used as a criterion to determine the temperature dependence of the geo-polymers synthesized. This criterion is a precursor of the transition to the glassy state. The activation energies could thus be determined for the geo-polymers synthesized with potassium hydroxide or sodium hydroxide. (authors)

Modelling of Diffuse Failure and Fluidization in geo materials and Geo structures

International Nuclear Information System (INIS)

Pastor, M.

2013-01-01

Failure of geo structures is caused by changes in effective stresses induced by external loads (earthquakes, for instance), change in the pore pressures (rain), in the geometry (erosion), or in materials properties (chemical attack, degradation, weathering). Landslides can by analysed as the failure of a geo structure, the slope. There exist many alternative classifications of landslides can be analyzed as the failure of a geo structure, the slope. There exist many alternative classifications of landslides, but we will consider here a simple classification into slides and flows. In the case of slides, the failure consists on the movement of a part of the slope with deformations which concentrate in a narrow zone, the failure surface. This can be idealized as localized failure, and it is typical of over consolidated or dense materials exhibiting softening. On the other hand, flows are made of fluidized materials, flowing in a fluid like manner. This mechanism of failure is known as diffuse failure, and has received much less attention by researchers. Modelling of diffuse failure of slopes is complex, because there appear difficulties in the mathematical, constitutive and numerical models, which have to account for a phase transition. This work deals with modeling, and we will present here some tools recently developed by the author and the group to which he belongs. (Author)

Hepatitis E epidemics in India

Indian Academy of Sciences (India)

The first well recorded epidemic was in 1955-56 here in Delhi with nearly 30000 cases. Large outbreaks occurred in 1978 in Kashmir. My interest in this disease began in 1991 during investigations into a large epidemic of hepatitis E in Kanpur that my mentor, later Prof SR Naik, and I undertook. I will use this epidemic as an ...

GeoForum MV 2012. GIS schafft Energie. Contributions of geo-information science to the energy turnaround; GeoForum MV 2012. GIS schafft Energie. Beitraege der Geoinformationswirtschaft zur Energiewende

Energy Technology Data Exchange (ETDEWEB)

Bill, Ralf [Rostock Univ. (Germany). Professur fuer Geodaesie und Geoinformatik; Flach, Guntram [Fraunhofer IGD, Rostock (Germany); Klammer, Ulf; Lerche, Tobias (eds.) [GeoMV e.V. Verein der Geoinformationswirtschaft Mecklenburg-Vorpommern e.V., Rostock (Germany)

2012-07-01

Geo-information systems (GIS) have become indispensable in the development and implementation of concepts for enhanced use of renewable energy sources. Publications in geo-informatics so far have tended to focus on potential studies and regional planning aspects, but also on the establishment of land registers for energy sources and heat consumption. This year's GeoForum presented a comprehensive and concise picture of all these trends. Further subjects were discussed as well, i.e. 1. Logistics, eMobility and the development of individualised services in public transportation; 2. Geodata especially of Mecklenburg-Western Pomerania state and with a view to the power supply sector; 3. Basic technologies as current trends in INSPIRE with increasing data volumes and services will enhance their uses in the energy sector.

GeoNet's `Felt Rapid': Collecting What Is Needed, When You Need It, No More, No Less. Rapid, Volumous Data For Response Versus Detailed, Precise Data For Research

Science.gov (United States)

Little, C. L.; McBride, S.; Balfour, N.

2016-12-01

New Zealand's geohazard monitoring agency, GeoNet, recently implemented `Felt Rapid': earthquake felt reporting that is quick and simple. GeoNet locates 20,000 earthquakes each year with hundreds of those reported as being felt. Starting in the late 1800s, the New Zealand public has become adept at completing felt reports but feedback since the Canterbury Earthquake Sequence suggested that traditional felt reporting was not meeting researchers' or the public's needs. GeoNet required something rapid, adaptable and robust. The solution was Felt Rapid, a mobile app and website where respondents simply pick from 6 cartoon images - representing Modified Mercalli Intensity (MMI) 3-8 - that best aligned to what they felt. For the last decade, felt reporting has been conducted via the GeoNet website, with additional targeted surveys after damaging earthquakes. The vast majority of the submitted felt reports were for earthquakes too small to cause damage, as these are by far the most frequent. Reports from small events are of little interest to researchers who are only concerned with damaging, MMI6 and above. However, we found that when damaging earthquakes did occur, such as Christchurch's M6.3, they were only sparsely reported (3,776 reports). Understandably, sitting at a computer and completing a lengthy online form wasn't a priority for people after a devastating earthquake. With Felt Rapid, reporting has to be completed within an hour of an earthquake, the use of GeoNet's automatically compiled felt reporting maps had evolved; their main purpose is immediate assessment of an earthquake's impact on populations, and is used by Civil Defence agencies. Reports are immediately displayed on an interactive map via the website and mobile app. With over 250,000 users this provides rapid and robust information regarding the experienced shaking. When a damaging earthquake occurs and researchers want to collect important and rare damaging felt reports, a separate in-depth survey

GeoSciML and EarthResourceML Update, 2012

Science.gov (United States)

Richard, S. M.; Commissionthe Management; Application Inte, I.

2012-12-01

CGI Interoperability Working Group activities during 2012 include deployment of services using the GeoSciML-Portrayal schema, addition of new vocabularies to support properties added in version 3.0, improvements to server software for deploying services, introduction of EarthResourceML v.2 for mineral resources, and collaboration with the IUSS on a markup language for soils information. GeoSciML and EarthResourceML have been used as the basis for the INSPIRE Geology and Mineral Resources specifications respectively. GeoSciML-Portrayal is an OGC GML simple-feature application schema for presentation of geologic map unit, contact, and shear displacement structure (fault and ductile shear zone) descriptions in web map services. Use of standard vocabularies for geologic age and lithology enables map services using shared legends to achieve visual harmonization of maps provided by different services. New vocabularies have been added to the collection of CGI vocabularies provided to support interoperable GeoSciML services, and can be accessed through http://resource.geosciml.org. Concept URIs can be dereferenced to obtain SKOS rdf or html representations using the SISSVoc vocabulary service. New releases of the FOSS GeoServer application greatly improve support for complex XML feature schemas like GeoSciML, and the ArcGIS for INSPIRE extension implements similar complex feature support for ArcGIS Server. These improved server implementations greatly facilitate deploying GeoSciML services. EarthResourceML v2 adds features for information related to mining activities. SoilML provides an interchange format for soil material, soil profile, and terrain information. Work is underway to add GeoSciML to the portfolio of Open Geospatial Consortium (OGC) specifications.

The Correlation of Geo-Ecological Environment and Mountain Urban planning

Science.gov (United States)

Yang, Chun; Zeng, Wei

2018-01-01

As a special area with the complex geological structure, mountain city is more prone to geological disasters. Due to air pollution, ground subsidence, serious water pollution, earthquakes and floods geo-ecological environment problems have become increasingly serious, mountain urban planning is facing more severe challenges. Therefore, this article bases on the correlation research of geo-ecological environment and mountain urban planning, and re-examins mountain urban planning from the perspective of geo-ecological, coordinates the relationship between the human and nature by geo-ecological thinking, raises the questions which urban planning need to pay attention. And advocates creating an integrated system of geo-ecological and mountain urban planning, analysis the status and dynamics of present mountain urban planning.

Preserving location and absence privacy in geo-social networks

DEFF Research Database (Denmark)

Freni, Dario; Vicente, Carmen Ruiz; Mascetti, Sergio

2010-01-01

accessible to multiple users. This renders it difficult for GeoSN users to control which information about them is available and to whom it is available. This paper addresses two privacy threats that occur in GeoSNs: location privacy and absence privacy. The former concerns the availability of information...... about the presence of users in specific locations at given times, while the latter concerns the availability of information about the absence of an individual from specific locations during given periods of time. The challenge addressed is that of supporting privacy while still enabling useful services....... The resulting geo-aware social networks (GeoSNs) pose privacy threats beyond those found in location-based services. Content published in a GeoSN is often associated with references to multiple users, without the publisher being aware of the privacy preferences of those users. Moreover, this content is often...

Geo-engineering: a curse or a blessing?

NARCIS (Netherlands)

Wissenburg, M.L.J.

2016-01-01

In recent years, geo-engineering has been suggested as a viable strategy in dealing with climate change, the main indicator of what has become known as ‘the Anthropocene’. In this paper, I investigate the effects of geo-engineering in terms of freedom – not the only but perhaps the most important

Communication of geo-scientific safety arguments

International Nuclear Information System (INIS)

Flavelle, P.; Goodwin, B.; Jensen, M.; Linden, R.; Mazurek, M.; Srivastave, M.; Strom, A.; Sudicky, E.; Voinis, S.

2007-01-01

Working Group B addressed the communication of geo-scientific safety arguments through a discussion of practical experience as it related to the methods, types of information and specific arguments found to best communicate geo-scientific concepts and notions of safety with broad audiences including, colleagues, authorities and regulators, political decision makers, academics, and the general public. The following questions were suggested by the programme committee of the AMIGO-2 workshop for discussion by Working Group B with respect to the communication of geo-scientific information and safety arguments: - What is the place of geo-scientific arguments in relation to quantitative and qualitative topics like scenario and FEPs (features, events, processes) assessment, simulated repository evolution, calculated dose or risk impacts, engineering tests of materials, etc., when presenting a safety case to different audiences and with respect to the various stages of the repository programme? (see section 3). - Would we be better off focusing messages to the public on time scales of a few hundred years or a few generations? (see section 4). - How do you handle the fact that geoscience interpretations seldom are unique and data often are open to various interpretations? (see section 5). - How do you handle expert controversy on a specific topic? (see section 6). (authors)

Instrumental Genesis in GeoGebra Based Board Game Design

DEFF Research Database (Denmark)

Misfeldt, Morten

2013-01-01

In this paper I address the use of digital tools (GeoGebra) in open ended design activities, with primary school children. I present results from the research and development project “Creative Digital Mathematics”, which aims to use the pupil’s development of mathematical board games as a vehicle...... in their work with GeoGebra and how they relate their work with GeoGebra and mathematics to fellow pupils and real life situations. The results show that pupils’ consider development of board games as meaningful mathematical activity, and that they develop skills with GeoGebra, furthermore the pupils considers...... potential use of their board game by classmates in their design activities....

Geo Uruguay

International Nuclear Information System (INIS)

2008-06-01

This book is based on the Geo Uruguay project which consists on the analysis and diagnosis of the environmental impact in the human welfare. The main topics covered in the different chapters are: human welfare, geographical aspects, climate change, transport and energy, changes in land use, coastal features, biodiversity, industrial urbanization, waste and territorial ordering, energy offers like oil, wood, natural gas, coal and electricity

Simulation of Telescope Detectivity for Geo Survey and Tracking

Science.gov (United States)

Richard, P.

2014-09-01

As the number of space debris on Earths Orbit increases steadily, the need to survey, track and catalogue them becomes of key importance. In this context, CNES has been using the TAROT Telescopes (Rapid Telescopes for Transient Objects owned and operated by CNRS) for several years to conduct studies about space surveillance and tracking. Today, two testbeds of services using the TAROT telescopes are running every night: one for GEO situational awareness and the second for debris tracking. Additionally to the CNES research activity on space surveillance and tracking domain, an operational collision avoidance service for LEO and GEO satellites is in place at CNES for several years. This service named CAESAR (Conjunction Analysis and Evaluation: Alerts and Recommendations) is used by CNES as well as by external customers. As the optical debris tracking testbed based on TAROT telescopes is the first step toward an operational provider of GEO measures that could be used by CAESAR, simulations have been done to help choosing the sites and types of telescopes that could be added in the GEO survey and debris tracking telescope network. One of the distinctive characteristics of the optical observation of space debris compared to traditional astronomic observation is the need to observe objects at low elevations. The two mains reasons for this are the need to observe the GEO belt from non-equatorial sites and the need to observe debris at longitudes far from the telescope longitude. This paper presents the results of simulations of the detectivity for GEO debris of various telescopes and sites, based on models of the GEO belt, the atmosphere and the instruments. One of the conclusions is that clever detection of faint streaks and spread sources by image processing is one of the major keys to improve the detection of debris on the GEO belt.

Making the GeoConnection: Web 2.0-based support for early-career geoscientists (Invited)

Science.gov (United States)

Martinez, C. M.; Gonzales, L. M.; Keane, C. M.

2010-12-01

The US Bureau of Labor estimates that there will be an 18% increase in geoscience jobs between 2008 and 2018 in the United States, and demand for geoscientists is expected to rise worldwide as scientists tackle global challenges related to resources, hazards and climate. At the same time, the geoscience workforce is aging, with approximately half of the current workforce reaching retirement age within the next 10-15 years. A new generation of geoscientists must be ready to take the reins. To support this new generation, AGI’s geoscience workforce outreach programs were designed to help retain geoscience students through their degree programs and into careers in the field. These resources include support for early-career professional development and career planning. AGI’s GeoConnection Network for the Geosciences provides a venue for informal dissemination of career information and professional resources. The network links Web 2.0 platforms, including a Facebook page, YouTube Channel and Twitter feed, to build a robust geoscience community of geoscientists at all stages of their careers. Early-career geoscientists can participate in GeoConnection to network with other scientists, and to receive information about professional development and job opportunities. Through GeoConnection packets, students can join professional societies which will assist their transition from school to the workplace. AGI’s member societies provide professional development course work, field trips, career services, interviewing opportunities, and community meetings. As part of the GeoConnection Network, AGI hosts informational webinars to highlight new workforce data, discuss current affairs in the geosciences, and to provide information about geoscience careers. Between December 2009 and August 2010, AGI hosted 10 webinars, with more than 300 total participants for all the webinars, and 5 additional webinars are planned for the remainder of the year. The webinars offer early

An Overview of the GEOS-5 Aerosol Reanalysis

Science.gov (United States)

da Silva, Arlindo; Colarco, Peter Richard; Damenov, Anton Spasov; Buchard-Marchant, Virginie; Randles, Cynthia A.; Gupta, Pawan

2011-01-01

GEOS-5 is the latest version of the NASA Global Modeling and Assimilation Office (GMAO) earth system model. GEOS-5 contains components for atmospheric circulation and composition (including data assimilation), ocean circulation and biogeochemistry, and land surface processes. In addition to traditional meteorological parameters, GEOS-5 includes modules representing the atmospheric composition, most notably aerosols and tropospheric/stratospheric chemical constituents, taking explicit account of the impact of these constituents on the radiative processes of the atmosphere. MERRA is a NASA meteorological reanalysis for the satellite era (1979-present) using GEOS-5. This project focuses on historical analyses of the hydrological cycle on a broad range of weather and climate time scales. As a first step towards an integrated Earth System Analysis (IESA), the GMAO is extending MERRA with reanalyses for other components of the earth system: land, ocean, bio-geochemistry and atmospheric constituents. In this talk we will present results from the MERRA-driven aerosol reanalysis covering the Aqua period (2003-present). The assimilation of Aerosol Optical Depth (AOD) in GEOS-5 involves very careful cloud screening and homogenization of the observing system by means of a Neural Net scheme that translates MODIS radiances into AERONET calibrated AOD. These measurements are further quality controlled using an adaptive buddy check scheme, and assimilated using the Local Displacement Ensemble (LDE) methodology. For this reanalysis, GEOS-5 runs at a nominal 50km horizontal resolution with 72 vertical layers (top at approx. 8Skm). GEOS-5 is driven by daily biomass burning emissions derived from MODIS fire radiative power retrievals. We will present a summary of our efforts to validate such dataset. The GEOS-5 assimilated aerosol fields are first validated by comparison to independent in-situ measurements (AERONET and PM2.5 surface concentrations). In order to asses aerosol

Real Time Adaptive Stream-oriented Geo-data Filtering

Directory of Open Access Journals (Sweden)

A. A. Golovkov

2016-01-01

Full Text Available The cutting-edge engineering maintenance software systems of various objects are aimed at processing of geo-location data coming from the employees’ mobile devices in real time. To reduce the amount of transmitted data such systems, usually, use various filtration methods of geo-coordinates recorded directly on mobile devices.The paper identifies the reasons for errors of geo-data coming from different sources, and proposes an adaptive dynamic method to filter geo-location data. Compared with the static method previously described in the literature [1] the approach offers to align adaptively the filtering threshold with changing characteristics of coordinates from many sources of geo-location data.To evaluate the efficiency of the developed filter method have been involved about 400 thousand points, representing motion paths of different type (on foot, by car and high-speed train and parking (indoors, outdoors, near high-rise buildings to take data from different mobile devices. Analysis of results has shown that the benefits of the proposed method are the more precise location of long parking (up to 6 hours and coordinates when user is in motion, the capability to provide steam-oriented filtering of data from different sources that allows to use the approach in geo-information systems, providing continuous monitoring of the location in streamoriented data processing in real time. The disadvantage is a little bit more computational complexity and increasing amount of points of the final track as compared to other filtration techniques.In general, the developed approach enables a significant quality improvement of displayed paths of moving mobile objects.

Phenotypic and Genotypic Comparison of Epidemic and Non-Epidemic Strains of Pseudomonas aeruginosa from Individuals with Cystic Fibrosis.

Directory of Open Access Journals (Sweden)

Jessica Duong

Full Text Available Epidemic strains of Pseudomonas aeruginosa have been found worldwide among the cystic fibrosis (CF patient population. Using pulse-field gel electrophoresis, the Prairie Epidemic Strain (PES has recently been found in one-third of patients attending the Calgary Adult CF Clinic in Canada. Using multi-locus sequence typing, PES isolates from unrelated patients were found to consistently have ST192. Though most patients acquired PES prior to enrolling in the clinic, some patients were observed to experience strain replacement upon transitioning to the clinic whereby local non-epidemic P. aeruginosa isolates were displaced by PES. Here we genotypically and phenotypically compared PES to other P. aeruginosa epidemic strains (OES found around the world as well as local non-epidemic CF P. aeruginosa isolates in order to characterize PES. Since some epidemic strains are associated with worse clinical outcomes, we assessed the pathogenic potential of PES to determine if these isolates are virulent, shared properties with OES, and if its phenotypic properties may offer a competitive advantage in displacing local non-epidemic isolates during strain replacement. As such, we conducted a comparative analysis using fourteen phenotypic traits, including virulence factor production, biofilm formation, planktonic growth, mucoidy, and antibiotic susceptibility to characterize PES, OES, and local non-epidemic isolates. We observed that PES and OES could be differentiated from local non-epidemic isolates based on biofilm growth with PES isolates being more mucoid. Pairwise comparisons indicated that PES produced significantly higher levels of proteases and formed better biofilms than OES but were more susceptible to antibiotic treatment. Amongst five patients experiencing strain replacement, we found that super-infecting PES produced lower levels of proteases and elastases but were more resistant to antibiotics compared to the displaced non-epidemic isolates. This

Characterization of ginger essential oil/palygorskite composite (GEO-PGS) and its anti-bacteria activity.

Science.gov (United States)

Lei, Hong; Wei, Qiaonian; Wang, Qing; Su, Anxiang; Xue, Mei; Liu, Qin; Hu, Qiuhui

2017-04-01

To explore a novel kind of anti-bacterial composite material having the excellent antibacterial ability, stability and specific-targeting capability, palygorskite (PGS) was used as the carrier of ginger essential oil (GEO) and a novel kind of composite GEO-PGS was prepared by ion exchange process. The characterization and the antibacterial activity of GEO-PGS was investigated in this study. Results of FTIR, XPS, XRD,TG analysis and SEM observation demonstrated the combination of GEO and PGS, GEO was absorbed on the surface of PGS, and the content of GEO in the composite was estimated to be 18.66%. Results of minimal inhibitory concentration (MIC) analysis, growth curve and Gram staining analysis of Staphylococci aureus and Escherichia coli exposed to GEO-PGS showed that GEO-PGS had much higher antibacterial activity than GEO, and GEO-PGS had the specific-targeting antibacterial capability. Moreover, GEO-PGS showed the characteristics of thermo-stability, acidity and alkalinity-resistance in exerting its anti-bacteria activity. In conclusion, the novel composite GEO-PGS combined the bacteria-absorbent activity of PGS and the antibacterial activity of GEO, suggesting the great potential application of GEO-PGS as the novel composite substance with high antibacterial activity. Copyright © 2016 Elsevier B.V. All rights reserved.

Geo-communication, web-services, and spatial data infrastructure

DEFF Research Database (Denmark)

Brodersen, Lars; Nielsen, Anders

2007-01-01

The introduction of web-services as index-portals based on geo-information has changed the conditions for both content and form of geo-communication. A high number of players and interactions as well as a very high number of all kinds of information and combinations of these caracterise web...... looks very complex, and it will get even more complex. Therefore, there is a strong need for theories and models that can describe this complex web in the SDI and geo-communication consisting of active components, passive components, users, and information in order to make it possible to handle...

Geo textiles and related products used in the waterproofing of reservoirs. Situation in Morocco

International Nuclear Information System (INIS)

Leiro Lopez, A.; Mateo Sanz, B.

2015-01-01

The aim of this paper is to describe the geo textiles, and products related to geo textiles, used for the building of water-storage reservoirs, which can be applicable to the construction of this kind of structures in Morocco. It presents different types of geo textiles and related products most commonly used in reservoirs, such as geo nets, geo grids, geo mats and geo composites, describing their characteristics and experimental methodology. Furthermore, and drawing on the Spanish Manual for Design, Construction, Operation and Maintenance of Reservoirs, emphasis is placed on the functions that geo synthetics can perform, such as protection and filter in the case of geo textiles, and drainage in the case of geo nets and draining composites. Finally, several works of this sort of structures located in Morocco are cited. (Author)

The ConnectinGEO Observation Inventory

Science.gov (United States)

Santoro, M.; Nativi, S.; Jirka, S.; McCallum, I.

2016-12-01

ConnectinGEO (Coordinating an Observation Network of Networks EnCompassing saTellite and IN-situ to fill the Gaps in European Observations) is an EU-funded project under the H2020 Framework Programme. The primary goal of the project is to link existing coordinated Earth Observation networks with science and technology (S&T) communities, the industry sector and the GEOSS and Copernicus stakeholders. An expected outcome of the project is a prioritized list of critical gaps within GEOSS (Global Earth Observation System of Systems) in observations and models that translate observations into practice relevant knowledge. The project defines and utilizes a formalized methodology to create a set of observation requirements that will be related to information on available observations to identify key gaps. Gaps in the information provided by current observation systems as well as gaps in the systems themselves will be derived from five different threads. One of these threads consists in the analysis of the observations and measurements that are currently registered in GEO Discovery and Access Broker (DAB). To this aim, an Observation Inventory (OI) has been created and populated using the current metadata information harmonized by the DAB. This presentation describes the process defined to populate the ConnectinGEO OI and the resulting system architecture. In addition, it provides information on how to systematically access the OI for performing the gap analysis. Furthermore it demonstrates initial findings of the gap analysis, and shortcomings in the metadata that need attention. The research leading to these results benefited from funding by the European Union H2020 Framework Programme under grant agreement n. 641538 (ConnectinGEO).

Hybridization of Environmental Microbial Community Nucleic Acids by GeoChip.

Science.gov (United States)

Van Nostrand, Joy D; Yin, Huaqin; Wu, Liyou; Yuan, Tong; Zhou, Jizhong

2016-01-01

Functional gene arrays, like the GeoChip, allow for the study of tens of thousands of genes in a single assay. The GeoChip array (5.0) contains probes for genes involved in geochemical cycling (N, C, S, and P), metal homeostasis, stress response, organic contaminant degradation, antibiotic resistance, secondary metabolism, and virulence factors as well as genes specific for fungi, protists, and viruses. Here, we briefly describe GeoChip design strategies (gene selection and probe design) and discuss minimum quantity and quality requirements for nucleic acids. We then provide detailed protocols for amplification, labeling, and hybridization of samples to the GeoChip.

Spatial Data Infrastructure in the Perspective of Modern Geo-communication

DEFF Research Database (Denmark)

Brodersen, Lars; Nielsen, Anders

2006-01-01

-edge of communication-theories play important roles. The introduction of web-services as index-portals based on geo-information has changed the conditions for both content and form of geo-communication. A high number of players and interactions as well as a very high number of all kinds of information and combinations...... the increasing complexity. Modern web-based geo-communication and its infrastructure looks very complex, and it will get even more complex! Therefore there is a strong need for theories and models that can de-scribe this complex web in the SDI in the perspective of modern geo-communication....

High-content image informatics of the structural nuclear protein NuMA parses trajectories for stem/progenitor cell lineages and oncogenic transformation.

Science.gov (United States)

Vega, Sebastián L; Liu, Er; Arvind, Varun; Bushman, Jared; Sung, Hak-Joon; Becker, Matthew L; Lelièvre, Sophie; Kohn, Joachim; Vidi, Pierre-Alexandre; Moghe, Prabhas V

2017-02-01

Stem and progenitor cells that exhibit significant regenerative potential and critical roles in cancer initiation and progression remain difficult to characterize. Cell fates are determined by reciprocal signaling between the cell microenvironment and the nucleus; hence parameters derived from nuclear remodeling are ideal candidates for stem/progenitor cell characterization. Here we applied high-content, single cell analysis of nuclear shape and organization to examine stem and progenitor cells destined to distinct differentiation endpoints, yet undistinguishable by conventional methods. Nuclear descriptors defined through image informatics classified mesenchymal stem cells poised to either adipogenic or osteogenic differentiation, and oligodendrocyte precursors isolated from different regions of the brain and destined to distinct astrocyte subtypes. Nuclear descriptors also revealed early changes in stem cells after chemical oncogenesis, allowing the identification of a class of cancer-mitigating biomaterials. To capture the metrology of nuclear changes, we developed a simple and quantitative "imaging-derived" parsing index, which reflects the dynamic evolution of the high-dimensional space of nuclear organizational features. A comparative analysis of parsing outcomes via either nuclear shape or textural metrics of the nuclear structural protein NuMA indicates the nuclear shape alone is a weak phenotypic predictor. In contrast, variations in the NuMA organization parsed emergent cell phenotypes and discerned emergent stages of stem cell transformation, supporting a prognosticating role for this protein in the outcomes of nuclear functions. Copyright © 2017 Elsevier Inc. All rights reserved.

Online plagiarism training falls short in biology classrooms.

Science.gov (United States)

Holt, Emily A; Fagerheim, Britt; Durham, Susan

2014-01-01

Online plagiarism tutorials are increasingly popular in higher education, as faculty and staff try to curb the plagiarism epidemic. Yet no research has validated the efficacy of such tools in minimizing plagiarism in the sciences. Our study compared three plagiarism-avoidance training regimens (i.e., no training, online tutorial, or homework assignment) and their impacts on students' ability to accurately discriminate plagiarism from text that is properly quoted, paraphrased, and attributed. Using pre- and postsurveys of 173 undergraduate students in three general ecology courses, we found that students given the homework assignment had far greater success in identifying plagiarism or the lack thereof compared with students given no training. In general, students trained with the homework assignment more successfully identified plagiarism than did students trained with the online tutorial. We also found that the summative assessment associated with the plagiarism-avoidance training formats (i.e., homework grade and online tutorial assessment score) did not correlate with student improvement on surveys through time.

Online Plagiarism Training Falls Short in Biology Classrooms

Science.gov (United States)

Holt, Emily A.; Fagerheim, Britt; Durham, Susan

2014-01-01

Online plagiarism tutorials are increasingly popular in higher education, as faculty and staff try to curb the plagiarism epidemic. Yet no research has validated the efficacy of such tools in minimizing plagiarism in the sciences. Our study compared three plagiarism-avoidance training regimens (i.e., no training, online tutorial, or homework assignment) and their impacts on students’ ability to accurately discriminate plagiarism from text that is properly quoted, paraphrased, and attributed. Using pre- and postsurveys of 173 undergraduate students in three general ecology courses, we found that students given the homework assignment had far greater success in identifying plagiarism or the lack thereof compared with students given no training. In general, students trained with the homework assignment more successfully identified plagiarism than did students trained with the online tutorial. We also found that the summative assessment associated with the plagiarism-avoidance training formats (i.e., homework grade and online tutorial assessment score) did not correlate with student improvement on surveys through time. PMID:24591507

Web catalog of oceanographic data using GeoNetwork

Science.gov (United States)

Marinova, Veselka; Stefanov, Asen

2017-04-01

Most of the data collected, analyzed and used by Bulgarian oceanographic data center (BgODC) from scientific cruises, argo floats, ferry boxes and real time operating systems are spatially oriented and need to be displayed on the map. The challenge is to make spatial information more accessible to users, decision makers and scientists. In order to meet this challenge, BgODC concentrate its efforts on improving dynamic and standardized access to their geospatial data as well as those from various related organizations and institutions. BgODC currently is implementing a project to create a geospatial portal for distributing metadata and search, exchange and harvesting spatial data. There are many open source software solutions able to create such spatial data infrastructure (SDI). Finally, the GeoNetwork open source is chosen, as it is already widespread. This software is free, effective and "cheap" solution for implementing SDI at organization level. It is platform independent and runs under many operating systems. Filling of the catalog goes through these practical steps: • Managing and storing data reliably within MS SQL spatial data base; • Registration of maps and data of various formats and sources in GeoServer (most popular open source geospatial server embedded with GeoNetwork) ; • Filling added meta data and publishing geospatial data at the desktop of GeoNetwork. GeoServer and GeoNetwork are based on Java so they require installing of a servlet engine like Tomcat. The experience gained from the use of GeoNetwork Open Source confirms that the catalog meets the requirements for data management and is flexible enough to customize. Building the catalog facilitates sustainable data exchange between end users. The catalog is a big step towards implementation of the INSPIRE directive due to availability of many features necessary for producing "INSPIRE compliant" metadata records. The catalog now contains all available GIS data provided by BgODC for Internet

Fieldwork online: a GIS-based electronic learning environment for supervising fieldwork

Science.gov (United States)

Alberti, Koko; Marra, Wouter; Baarsma, Rein; Karssenberg, Derek

2016-04-01

Fieldwork comes in many forms: individual research projects in unique places, large groups of students on organized fieldtrips, and everything in between those extremes. Supervising students in often distant places can be a logistical challenge and requires a significant time investment of their supervisors. We developed an online application for remote supervision of students on fieldwork. In our fieldworkonline webapp, which is accessible through a web browser, students can upload their field data in the form of a spreadsheet with coordinates (in a system of choice) and data-fields. Field data can be any combination of quantitative or qualitative data, and can contain references to photos or other documents uploaded to the app. The student's data is converted to a map with data-points that contain all the data-fields and links to photos and documents associated with that location. Supervisors can review the data of their students and provide feedback on observations, or geo-referenced feedback on the map. Similarly, students can ask geo-referenced questions to their supervisors. Furthermore, supervisors can choose different basemaps or upload their own. Fieldwork online is a useful tool for supervising students at a distant location in the field and is most suitable for first-order feedback on students' observations, can be used to guide students to interesting locations, and allows for short discussions on phenomena observed in the field. We seek user that like to use this system, we are able to provide support and add new features if needed. The website is built and controlled using Flask, an open-source Python Framework. The maps are generated and controlled using MapServer and OpenLayers, and the database is built in PostgreSQL with PostGIS support. Fieldworkonline and all tools used to create it are open-source. Experience fieldworkonline at our demo during this session, or online at fieldworkonline.geo.uu.nl (username: EGU2016, password: Vienna).

Evaluation of GEOS-5 sulfur dioxide simulations during the Frostburg, MD 2010 field campaign

Directory of Open Access Journals (Sweden)

V. Buchard

2014-02-01

Full Text Available Sulfur dioxide (SO2 is a major atmospheric pollutant with a strong anthropogenic component mostly produced by the combustion of fossil fuel and other industrial activities. As a precursor of sulfate aerosols that affect climate, air quality, and human health, this gas needs to be monitored on a global scale. Global climate and chemistry models including aerosol processes along with their radiative effects are important tools for climate and air quality research. Validation of these models against in-situ and satellite measurements is essential to ascertain the credibility of these models and to guide model improvements. In this study, the Goddard Chemistry, Aerosol, Radiation, and Transport (GOCART module running on-line inside the Goddard Earth Observing System version 5 (GEOS-5 model is used to simulate aerosol and SO2 concentrations. Data taken in November 2010 over Frostburg, Maryland during an SO2 field campaign involving ground instrumentation and aircraft are used to evaluate GEOS-5 simulated SO2 concentrations. Preliminary data analysis indicated the model overestimated surface SO2 concentration, which motivated the examination of the specification of SO2 anthropogenic emission rates. As a result of this analysis, a revision of anthropogenic emission inventories in GEOS-5 was implemented, and the vertical placement of SO2 sources was updated. Results show that these revisions improve the model agreement with observations locally and in regions outside the area of this field campaign. In particular, we use the ground-based measurements collected by the United States Environmental Protection Agency (US EPA for the year 2010 to evaluate the revised model simulations over North America.

GeoBus: sharing science research with schools

Science.gov (United States)

Roper, Kathryn; Robinson, Ruth; Moorhouse, Ben

2016-04-01

GeoBus (www.geobus.org.uk) is an educational outreach project that was developed in 2012 by the Department of Earth and Environmental Sciences at the University of St Andrews, and it is currently sponsored by industry, NERC, The Crown Estate, and the Scottish Government. The aims of GeoBus are to support the teaching of Earth Science in secondary (middle and high) schools by providing teaching support to schools that have little or no experience in teaching this subject. This is, in part, done through the sharing of new science research outcomes and the experiences of young researchers with school pupils to provide a bridge between industry, higher education institutions, research councils and schools. Since its launch, over 40,000 pupils will have been involved in experiential Earth science learning activities in 190 different schools (over 400 separate visits) across the length and breadth of Scotland: many of these schools are in remote and disadvantaged regions. A new GeoBus project is under development within the Department of Earth Sciences at UCL in London. A key aim of GeoBus is to incorporate new research into our workshops with the main challenge being the development of appropriate resources that incorporate the key learning aims and requirements of the science and geography curricula. GeoBus works closely with researchers, teachers and educational practitioners to tailor the research outcomes to the curricula as much as possible. Over the past four years, GeoBus has developed 17 workshops, 5 challenge events and extensive field trips and each of these activities are trialled and evaluated within the university, and adjustments are made before the activities are delivered in schools. Activities are continually reviewed and further developments are made in response to both teacher and pupil feedback. This critical reflection of the project's success and impact is important to insure a positive and significant contribution to the science learning in

A note on the optimal pricing strategy in the discrete-time Geo/Geo/1 queuing system with sojourn time-dependent reward

Directory of Open Access Journals (Sweden)

Doo Ho Lee

Full Text Available This work studies the optimal pricing strategy in a discrete-time Geo/Geo/1 queuing system under the sojourn time-dependent reward. We consider two types of pricing schemes. The first one is called the ex-post payment scheme where the server charges a price that is proportional to the time a customer spends in the system, and the second one is called ex-ante payment scheme where the server charges a flat price for all services. In each pricing scheme, a departing customer receives the reward that is inversely proportional to his/her sojourn time. The server should make the optimal pricing decisions in order to maximize its expected profits per time unit in each pricing scheme. This work also investigates customer's equilibrium joining or balking behavior under server's optimal pricing strategy. Numerical experiments are also conducted to validate our analysis. Keywords: Optimal pricing, Equilibrium behavior, Geo/Geo/1 queue, Sojourn time-dependent reward

Networked SIS Epidemics With Awareness

KAUST Repository

Paarporn, Keith; Eksin, Ceyhun; Weitz, Joshua S.; Shamma, Jeff S.

2017-01-01

We study a susceptible-infected-susceptible epidemic process over a static contact network where the nodes have partial information about the epidemic state. They react by limiting their interactions with their neighbors when they believe

FluBreaks: early epidemic detection from Google flu trends.

Science.gov (United States)

Pervaiz, Fahad; Pervaiz, Mansoor; Abdur Rehman, Nabeel; Saif, Umar

2012-10-04

The Google Flu Trends service was launched in 2008 to track changes in the volume of online search queries related to flu-like symptoms. Over the last few years, the trend data produced by this service has shown a consistent relationship with the actual number of flu reports collected by the US Centers for Disease Control and Prevention (CDC), often identifying increases in flu cases weeks in advance of CDC records. However, contrary to popular belief, Google Flu Trends is not an early epidemic detection system. Instead, it is designed as a baseline indicator of the trend, or changes, in the number of disease cases. To evaluate whether these trends can be used as a basis for an early warning system for epidemics. We present the first detailed algorithmic analysis of how Google Flu Trends can be used as a basis for building a fully automated system for early warning of epidemics in advance of methods used by the CDC. Based on our work, we present a novel early epidemic detection system, called FluBreaks (dritte.org/flubreaks), based on Google Flu Trends data. We compared the accuracy and practicality of three types of algorithms: normal distribution algorithms, Poisson distribution algorithms, and negative binomial distribution algorithms. We explored the relative merits of these methods, and related our findings to changes in Internet penetration and population size for the regions in Google Flu Trends providing data. Across our performance metrics of percentage true-positives (RTP), percentage false-positives (RFP), percentage overlap (OT), and percentage early alarms (EA), Poisson- and negative binomial-based algorithms performed better in all except RFP. Poisson-based algorithms had average values of 99%, 28%, 71%, and 76% for RTP, RFP, OT, and EA, respectively, whereas negative binomial-based algorithms had average values of 97.8%, 17.8%, 60%, and 55% for RTP, RFP, OT, and EA, respectively. Moreover, the EA was also affected by the region's population size

Guide to LIBXSIF, a Library for Parsing the Extended Standard Input Format of Accelerated Beamlines(LCC-0060)

International Nuclear Information System (INIS)

Tenenbaum, P

2003-01-01

We describe LIBXSIF, a standalone library for parsing the Extended Standard Input Format of accelerator beamlines. Included in the description are: documentation of user commands; full description of permitted accelerator elements and their attributes; the construction of beamline lists; the mechanics of adding LIBXSIF to an existing program; and ''under the hood'' details for users who wish to modify the library or are merely morbidly curious

Towards the creation of a European Network of Earth Observation Networks within GEO. The ConnectinGEO project.

Science.gov (United States)

Masó, Joan; Serral, Ivette; Menard, Lionel; Wald, Lucien; Nativi, Stefano; Plag, Hans-Peter; Jules-Plag, Shelley; Nüst, Daniel; Jirka, Simon; Pearlman, Jay; De Maziere, Martine

2015-04-01

ConnectinGEO (Coordinating an Observation Network of Networks EnCompassing saTellite and IN-situ to fill the Gaps in European Observations" is a new H2020 Coordination and Support Action with the primary goal of linking existing Earth Observation networks with science and technology (S&T) communities, the industry sector, the Group on Earth Observations (GEO), and Copernicus. ConnectinGEO aims to facilitate a broader and more accessible knowledge base to support the needs of GEO, its Societal Benefit Areas (SBAs) and the users of the Global Earth Observing System of Systems (GEOSS). A broad range of subjects from climate, natural resources and raw materials, to the emerging UN Sustainable Development Goals (SDGs) will be addressed. The project will generate a prioritized list of critical gaps within available observation data and models to translate observations into practice-relevant knowledge, based on stakeholder consultation and systematic analysis. Ultimately, it will increase coherency of European observation networks, increase the use of Earth observations for assessments and forecasts and inform the planning for future observation systems. ConnectinGEO will initiate a European Network of Earth Observation Networks (ENEON) that will encompass space-based, airborne and in-situ observations networks. ENEON will be composed by project partners representing thematic observation networks along with the GEOSS Science and Technology Stakeholder Network, GEO Communities of Practices, Copernicus services, Sentinel missions and in-situ support data representatives, representatives of the space-based, airborne and in-situ observations European networks (e.g. EPOS, EMSO and GROOM, etc), representatives of the industry sector and European and national funding agencies, in particular those participating in the future ERA-PlaNET. At the beginning, the ENEON will be created and managed by the project. Then the management will be transferred to the network itself to ensure

Pro iOS Geo building apps with location based services

CERN Document Server

Andreucci, Giacomo

2013-01-01

Deepen your app development skills with Pro iOS Geo. This book shows you how to use geolocation-based tools to enhance the iOS apps you develop. Author Giacomo Andreucci describes different ways to integrate geo services, depending on the kind of app you're looking to develop: a web app, a hybrid app, or a native app. You'll discover how to use the Google Maps API features to integrate powerful geo capabilities in your apps with a little effort. You'll learn how to: Design geographic features for your apps while respecting usability criteria Design touristic geo apps Use HTML5 and the Google M

Geostationary Coastal and Air Pollution Events (GEO-CAPE) Sensitivity Analysis Experiment

Science.gov (United States)

Lee, Meemong; Bowman, Kevin

2014-01-01

Geostationary Coastal and Air pollution Events (GEO-CAPE) is a NASA decadal survey mission to be designed to provide surface reflectance at high spectral, spatial, and temporal resolutions from a geostationary orbit necessary for studying regional-scale air quality issues and their impact on global atmospheric composition processes. GEO-CAPE's Atmospheric Science Questions explore the influence of both gases and particles on air quality, atmospheric composition, and climate. The objective of the GEO-CAPE Observing System Simulation Experiment (OSSE) is to analyze the sensitivity of ozone to the global and regional NOx emissions and improve the science impact of GEO-CAPE with respect to the global air quality. The GEO-CAPE OSSE team at Jet propulsion Laboratory has developed a comprehensive OSSE framework that can perform adjoint-sensitivity analysis for a wide range of observation scenarios and measurement qualities. This report discusses the OSSE framework and presents the sensitivity analysis results obtained from the GEO-CAPE OSSE framework for seven observation scenarios and three instrument systems.

Parsing in a Dynamical System: An Attractor-Based Account of the Interaction of Lexical and Structural Constraints in Sentence Processing.

Science.gov (United States)

Tabor, Whitney; And Others

1997-01-01

Proposes a dynamical systems approach to parsing in which syntactic hypotheses are associated with attractors in a metric space. The experiments discussed documented various contingent frequency effects that cut across traditional linguistic grains, each of which was predicted by the dynamical systems model. (47 references) (Author/CK)

The Group on Earth Observations (GEO) through 2025

Science.gov (United States)

Ryan, Barbara; Cripe, Douglas

Ministers from the Group on Earth Observations (GEO) Member governments, meeting in Geneva, Switzerland in January 2014, unanimously renewed the mandate of GEO through 2025. Through a Ministerial Declaration, they reconfirmed that GEO’s guiding principles of collaboration in leveraging national, regional and global investments and in developing and coordinating strategies to achieve full and open access to Earth observations data and information in order to support timely and knowledge-based decision-making - are catalysts for improving the quality of life of people around the world, advancing global sustainability, and preserving the planet and its biodiversity. GEO Ministers acknowledged and valued the contributions of GEO Member governments and invited all remaining Member States of the United Nations to consider joining GEO. The Ministers also encouraged all Members to strengthen national GEO arrangements, and - of particular interest to COSPAR - they highlighted the unique contributions of Participating Organizations. In this regard, ten more organizations saw their applications approved by Plenary and joined the ranks along with COSPAR to become a Participating Organization in GEO, bringing the current total to 77. Building on the efforts of a Post-2015 Working Group, in which COSPAR participated, Ministers provided additional guidance for GEO and the evolution of its Global Earth Observation System of System (GEOSS) through 2025. Five key areas of activities for the next decade include the following: 1.) Advocating for the value of Earth observations and the need to continue improving Earth observation worldwide; 2.) Urging the adoption and implementation of data sharing principles globally; 3.) Advancing the development of the GEOSS information system for the benefit of users; 4.) Developing a comprehensive interdisciplinary knowledge base defining and documenting observations needed for all disciplines and facilitate availability and accessibility of

File Specification for GEOS-5 FP (Forward Processing)

Science.gov (United States)

Lucchesi, R.

2013-01-01

The GEOS-5 FP Atmospheric Data Assimilation System (GEOS-5 ADAS) uses an analysis developed jointly with NOAA's National Centers for Environmental Prediction (NCEP), which allows the Global Modeling and Assimilation Office (GMAO) to take advantage of the developments at NCEP and the Joint Center for Satellite Data Assimilation (JCSDA). The GEOS-5 AGCM uses the finite-volume dynamics (Lin, 2004) integrated with various physics packages (e.g, Bacmeister et al., 2006), under the Earth System Modeling Framework (ESMF) including the Catchment Land Surface Model (CLSM) (e.g., Koster et al., 2000). The GSI analysis is a three-dimensional variational (3DVar) analysis applied in grid-point space to facilitate the implementation of anisotropic, inhomogeneous covariances (e.g., Wu et al., 2002; Derber et al., 2003). The GSI implementation for GEOS-5 FP incorporates a set of recursive filters that produce approximately Gaussian smoothing kernels and isotropic correlation functions. The GEOS-5 ADAS is documented in Rienecker et al. (2008). More recent updates to the model are presented in Molod et al. (2011). The GEOS-5 system actively assimilates roughly 2 × 10(exp 6) observations for each analysis, including about 7.5 × 10(exp 5) AIRS radiance data. The input stream is roughly twice this volume, but because of the large volume, the data are thinned commensurate with the analysis grid to reduce the computational burden. Data are also rejected from the analysis through quality control procedures designed to detect, for example, the presence of cloud. To minimize the spurious periodic perturbations of the analysis, GEOS-5 FP uses the Incremental Analysis Update (IAU) technique developed by Bloom et al. (1996). More details of this procedure are given in Appendix A. The assimilation is performed at a horizontal resolution of 0.3125-degree longitude by 0.25- degree latitude and at 72 levels, extending to 0.01 hPa. All products are generated at the native resolution of the

Integrating ArcGIS Online with GEOSS Data Access Broker

Science.gov (United States)

Lucchi, Roberto; Hogeweg, Marten

2014-05-01

The Global Earth Observation System of Systems (GEOSS) seeks to address 9 societal benefit areas for Earth observations to address: disasters, health, energy, climate, agriculture, ecosystems, biodiversity, water, and weather. As governments and their partners continue to monitor the face of the Earth, the collection, storage, analysis, and sharing of these observations remain fragmented, incomplete, or redundant. Major observational gaps also remain (particularly as we seek to look beneath the surface of the land and the water). As such, GEO's credo is that "decision makers need a global, coordinated, comprehensive, and sustained system of observing systems." Not surprisingly, one of the largest block of issues facing GEOSS is in the area of data: the access to data (including the building services to make the data more accessible), inadequate data integration and interoperability, error and uncertainty of observations, spatial and temporal gaps in observations, and the related issues of user involvement and capacity building. This is especially for people who stand to gain the most benefit from the datasets, but don't have the resources or knowledge to use them. Esri has millions of GIS and imagery users in hundreds of thousands of organizations around the world that work in the aforementioned 9 GEO societal benefit areas. Esri is therefore proud to have entered into a partnership with GEOSS, more specifically by way of a Memorandum of Understanding (MOU) between Esri and the Earth and Space Science Informatics (ESSI) Laboratory of Prof. Stefano Nativi at the CNR (National Research Council of Italy) Institute of Atmospheric Pollution Research. Esri is working with the ESSI Lab to integrate ArcGIS Online by way of the ArcGIS Online API into the GEOSS Data Access Broker (DAB), resulting in the discoverability of all public content from ArcGIS Online through many of the search portals that participate in this network (e.g., DataOne, CEOS, CUAHSI, OneGeology, IOOS

The Distributed Geothermal Market Demand Model (dGeo): Documentation

Energy Technology Data Exchange (ETDEWEB)

McCabe, Kevin [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Mooney, Meghan E [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Sigrin, Benjamin O [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Gleason, Michael [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Liu, Xiaobing [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

2017-11-06

The National Renewable Energy Laboratory (NREL) developed the Distributed Geothermal Market Demand Model (dGeo) as a tool to explore the potential role of geothermal distributed energy resources (DERs) in meeting thermal energy demands in the United States. The dGeo model simulates the potential for deployment of geothermal DERs in the residential and commercial sectors of the continental United States for two specific technologies: ground-source heat pumps (GHP) and geothermal direct use (DU) for district heating. To quantify the opportunity space for these technologies, dGeo leverages a highly resolved geospatial database and robust bottom-up, agent-based modeling framework. This design is consistent with others in the family of Distributed Generation Market Demand models (dGen; Sigrin et al. 2016), including the Distributed Solar Market Demand (dSolar) and Distributed Wind Market Demand (dWind) models. dGeo is intended to serve as a long-term scenario-modeling tool. It has the capability to simulate the technical potential, economic potential, market potential, and technology deployment of GHP and DU through the year 2050 under a variety of user-defined input scenarios. Through these capabilities, dGeo can provide substantial analytical value to various stakeholders interested in exploring the effects of various techno-economic, macroeconomic, financial, and policy factors related to the opportunity for GHP and DU in the United States. This report documents the dGeo modeling design, methodology, assumptions, and capabilities.

Application of geo-information science methods in ecotourism exploitation

Science.gov (United States)

Dong, Suocheng; Hou, Xiaoli

2004-11-01

Application of geo-information science methods in ecotourism development was discussed in the article. Since 1990s, geo-information science methods, which take the 3S (Geographic Information System, Global Positioning System, and Remote Sensing) as core techniques, has played an important role in resources reconnaissance, data management, environment monitoring, and regional planning. Geo-information science methods can easily analyze and convert geographic spatial data. The application of 3S methods is helpful to sustainable development in tourism. Various assignments are involved in the development of ecotourism, such as reconnaissance of ecotourism resources, drawing of tourism maps, dealing with mass data, and also tourism information inquire, employee management, quality management of products. The utilization of geo-information methods in ecotourism can make the development more efficient by promoting the sustainable development of tourism and the protection of eco-environment.

3D GEO-INFORMATION REQUIREMENTS FOR DISASTER AND EMERGENCY MANAGEMENT

Directory of Open Access Journals (Sweden)

E. Demir Ozbek

2016-06-01

Full Text Available A conceptual approach is proposed to define 3D geo-information requirement for different types of disasters. This approach includes components such as Disaster Type-Sector-Actor-Process-Activity-Task-Data. According to disaster types processes, activities, tasks, sectors, and responsible and operational actors are derived. Based on the tasks, the needed level of detail for 3D geo-information model is determined. The levels of detail are compliant with the 3D international standard CityGML. After a brief introduction on the disaster phases and geo-information requirement for actors to perform the tasks, the paper discusses the current situation of disaster and emergency management in Turkey and elaborates on components of conceptual approach. This paper discusses the 3D geo-information requirements for the tasks to be used in the framework of 3D geo-information model for Disaster and Emergency Management System in Turkey. The framework is demonstrated for an industrial fire case in Turkey.

MyGeoHub: A Collaborative Geospatial Research and Education Platform

Science.gov (United States)

Kalyanam, R.; Zhao, L.; Biehl, L. L.; Song, C. X.; Merwade, V.; Villoria, N.

2017-12-01

Scientific research is increasingly collaborative and globally distributed; research groups now rely on web-based scientific tools and data management systems to simplify their day-to-day collaborative workflows. However, such tools often lack seamless interfaces, requiring researchers to contend with manual data transfers, annotation and sharing. MyGeoHub is a web platform that supports out-of-the-box, seamless workflows involving data ingestion, metadata extraction, analysis, sharing and publication. MyGeoHub is built on the HUBzero cyberinfrastructure platform and adds general-purpose software building blocks (GABBs), for geospatial data management, visualization and analysis. A data management building block iData, processes geospatial files, extracting metadata for keyword and map-based search while enabling quick previews. iData is pervasive, allowing access through a web interface, scientific tools on MyGeoHub or even mobile field devices via a data service API. GABBs includes a Python map library as well as map widgets that in a few lines of code, generate complete geospatial visualization web interfaces for scientific tools. GABBs also includes powerful tools that can be used with no programming effort. The GeoBuilder tool provides an intuitive wizard for importing multi-variable, geo-located time series data (typical of sensor readings, GPS trackers) to build visualizations supporting data filtering and plotting. MyGeoHub has been used in tutorials at scientific conferences and educational activities for K-12 students. MyGeoHub is also constantly evolving; the recent addition of Jupyter and R Shiny notebook environments enable reproducible, richly interactive geospatial analyses and applications ranging from simple pre-processing to published tools. MyGeoHub is not a monolithic geospatial science gateway, instead it supports diverse needs ranging from just a feature-rich data management system, to complex scientific tools and workflows.

Using the GeoFEST Faulted Region Simulation System

Science.gov (United States)

Parker, Jay W.; Lyzenga, Gregory A.; Donnellan, Andrea; Judd, Michele A.; Norton, Charles D.; Baker, Teresa; Tisdale, Edwin R.; Li, Peggy

2004-01-01

GeoFEST (the Geophysical Finite Element Simulation Tool) simulates stress evolution, fault slip and plastic/elastic processes in realistic materials, and so is suitable for earthquake cycle studies in regions such as Southern California. Many new capabilities and means of access for GeoFEST are now supported. New abilities include MPI-based cluster parallel computing using automatic PYRAMID/Parmetis-based mesh partitioning, automatic mesh generation for layered media with rectangular faults, and results visualization that is integrated with remote sensing data. The parallel GeoFEST application has been successfully run on over a half-dozen computers, including Intel Xeon clusters, Itanium II and Altix machines, and the Apple G5 cluster. It is not separately optimized for different machines, but relies on good domain partitioning for load-balance and low communication, and careful writing of the parallel diagonally preconditioned conjugate gradient solver to keep communication overhead low. Demonstrated thousand-step solutions for over a million finite elements on 64 processors require under three hours, and scaling tests show high efficiency when using more than (order of) 4000 elements per processor. The source code and documentation for GeoFEST is available at no cost from Open Channel Foundation. In addition GeoFEST may be used through a browser-based portal environment available to approved users. That environment includes semi-automated geometry creation and mesh generation tools, GeoFEST, and RIVA-based visualization tools that include the ability to generate a flyover animation showing deformations and topography. Work is in progress to support simulation of a region with several faults using 16 million elements, using a strain energy metric to adapt the mesh to faithfully represent the solution in a region of widely varying strain.

Epidemics in interconnected small-world networks.

Science.gov (United States)

Liu, Meng; Li, Daqing; Qin, Pengju; Liu, Chaoran; Wang, Huijuan; Wang, Feilong

2015-01-01

Networks can be used to describe the interconnections among individuals, which play an important role in the spread of disease. Although the small-world effect has been found to have a significant impact on epidemics in single networks, the small-world effect on epidemics in interconnected networks has rarely been considered. Here, we study the susceptible-infected-susceptible (SIS) model of epidemic spreading in a system comprising two interconnected small-world networks. We find that the epidemic threshold in such networks decreases when the rewiring probability of the component small-world networks increases. When the infection rate is low, the rewiring probability affects the global steady-state infection density, whereas when the infection rate is high, the infection density is insensitive to the rewiring probability. Moreover, epidemics in interconnected small-world networks are found to spread at different velocities that depend on the rewiring probability.

Epidemics in interconnected small-world networks.

Directory of Open Access Journals (Sweden)

Meng Liu

Full Text Available Networks can be used to describe the interconnections among individuals, which play an important role in the spread of disease. Although the small-world effect has been found to have a significant impact on epidemics in single networks, the small-world effect on epidemics in interconnected networks has rarely been considered. Here, we study the susceptible-infected-susceptible (SIS model of epidemic spreading in a system comprising two interconnected small-world networks. We find that the epidemic threshold in such networks decreases when the rewiring probability of the component small-world networks increases. When the infection rate is low, the rewiring probability affects the global steady-state infection density, whereas when the infection rate is high, the infection density is insensitive to the rewiring probability. Moreover, epidemics in interconnected small-world networks are found to spread at different velocities that depend on the rewiring probability.

GeoViQua: quality-aware geospatial data discovery and evaluation

Science.gov (United States)

Bigagli, L.; Papeschi, F.; Mazzetti, P.; Nativi, S.

2012-04-01

GeoViQua (QUAlity aware VIsualization for the Global Earth Observation System of Systems) is a recently started FP7 project aiming at complementing the Global Earth Observation System of Systems (GEOSS) with rigorous data quality specifications and quality-aware capabilities, in order to improve reliability in scientific studies and policy decision-making. GeoViQua main scientific and technical objective is to enhance the GEOSS Common Infrastructure (GCI) providing the user community with innovative quality-aware search and evaluation tools, which will be integrated in the GEO-Portal, as well as made available to other end-user interfaces. To this end, GeoViQua will promote the extension of the current standard metadata for geographic information with accurate and expressive quality indicators, also contributing to the definition of a quality label (GEOLabel). GeoViQua proposed solutions will be assessed in several pilot case studies covering the whole Earth Observation chain, from remote sensing acquisition to data processing, to applications in the main GEOSS Societal Benefit Areas. This work presents the preliminary results of GeoViQua Work Package 4 "Enhanced geo-search tools" (WP4), started in January 2012. Its major anticipated technical innovations are search and evaluation tools that communicate and exploit data quality information from the GCI. In particular, GeoViQua will investigate a graphical search interface featuring a coherent and meaningful aggregation of statistics and metadata summaries (e.g. in the form of tables, charts), thus enabling end users to leverage quality constraints for data discovery and evaluation. Preparatory work on WP4 requirements indicated that users need the "best" data for their purpose, implying a high degree of subjectivity in judgment. This suggests that the GeoViQua system should exploit a combination of provider-generated metadata (objective indicators such as summary statistics), system-generated metadata (contextual

Strategies GeoCape Intelligent Observation Studies @ GSFC

Science.gov (United States)

Cappelaere, Pat; Frye, Stu; Moe, Karen; Mandl, Dan; LeMoigne, Jacqueline; Flatley, Tom; Geist, Alessandro

2015-01-01

This presentation provides information a summary of the tradeoff studies conducted for GeoCape by the GSFC team in terms of how to optimize GeoCape observation efficiency. Tradeoffs include total ground scheduling with simple priorities, ground scheduling with cloud forecast, ground scheduling with sub-area forecast, onboard scheduling with onboard cloud detection and smart onboard scheduling and onboard image processing. The tradeoffs considered optimzing cost, downlink bandwidth and total number of images acquired.

Radiation resistance of GeO2-doped silica core optical fibers

International Nuclear Information System (INIS)

Shibata, Shuichi; Nakahara, Motohiro; Omori, Yasuharu

1985-01-01

Effects of hlogen addition to silica glass on the loss in optical fibers are examined by using halogen-free, chlorine-containing and fluorine-containing GeO 2 -doped silica core optical fibers. Measurements are made for dependence of induced loss in these optical fibers on various factors such as wavelength and total dose of gamma radiation as well as GeO 2 content. Ultraviolet absorption spectra are also observed. In addition, effects of halogens added to pure silica fibers are considered on the basis of Raman spectra of three different optical fibers (pure, F-doped, and F- and GeO 2 -codoped silica core). Thus, it is concluded that (1) addition of halogens (F and Cl) serves to decrease GeO defects and Ge(3) defects in GeO 2 -doped silica optical fibers ; (2) addition of halogens suppresses the increase in loss in GeO 2 -doped silica optical fibers induced by gamma radiation ; and (3) there are close relations between the increase in loss induced by gamma radiation and defects originally existing in the fibers. Effects of halogens added to GeO 2 -doped and pure silica optical fibers can be explained on the basis of the latter relations. (Nogami, K.)

The Features of Geo-Ecological Assessment within the Geo-Eco-Socio-Economic Approach to the Development of Northern Territories

Directory of Open Access Journals (Sweden)

Aleksander Ivanovich Semyachkov

2015-12-01

Full Text Available In modern conditions, for the purpose of preservation a territory’s ecosystem at its involvement in economic circulation, it is necessary to carry out the anticipatory geo-ecological assessment for indicating the degree of resistance to hypothetical anthropogenic influence. The existing methodological approaches for performing the geo-ecological assessment are unified and can often be equally applied to various types of territories. A new methodical approach for geo-ecological assessment is brought forth in the article. It takes into account the specific character of the Ural region’s northern territories. The approach is based on the point assessment of territory, which is explained by its large area, moreover, the point assessment is proposed to carry out before the development of the territory. This approach makes possible to consider the specific features of the territory’s ecosystem, namely its ability for self-restoration and self-cleaning in the process of economic development and after it. It allows carrying out the choice of economic activity direction on the whole and satisfying the condition of the minimization of the damage from violation the territory’s ecosystem and preservation its resource potential. The research results can be utilized in the studies of experts and students working on the geo-ecological assessment of territory

Research on geo-ontology construction based on spatial affairs

Science.gov (United States)

Li, Bin; Liu, Jiping; Shi, Lihong

2008-12-01

Geo-ontology, a kind of domain ontology, is used to make the knowledge, information and data of concerned geographical science in the abstract to form a series of single object or entity with common cognition. These single object or entity can compose a specific system in some certain way and can be disposed on conception and given specific definition at the same time. Ultimately, these above-mentioned worked results can be expressed in some manners of formalization. The main aim of constructing geo-ontology is to get the knowledge of the domain of geography, and provide the commonly approbatory vocabularies in the domain, as well as give the definite definition about these geographical vocabularies and mutual relations between them in the mode of formalization at different hiberarchy. Consequently, the modeling tool of conception model of describing geographic Information System at the hiberarchy of semantic meaning and knowledge can be provided to solve the semantic conception of information exchange in geographical space and make them possess the comparatively possible characters of accuracy, maturity and universality, etc. In fact, some experiments have been made to validate geo-ontology. During the course of studying, Geo-ontology oriented to flood can be described and constructed by making the method based on geo-spatial affairs to serve the governmental departments at all levels to deal with flood. Thereinto, intelligent retrieve and service based on geoontology of disaster are main functions known from the traditional manner by using keywords. For instance, the function of dealing with disaster information based on geo-ontology can be provided when a supposed flood happened in a certain city. The correlative officers can input some words, such as "city name, flood", which have been realized semantic label, to get the information they needed when they browse different websites. The information, including basic geographical information and flood distributing

[Epidemic parotiditis, a reportable disease].

Science.gov (United States)

Boverhoff, J C; Baart, J A

2013-01-01

Three consecutive patients with an acute swelling of one of the cheeks, were diagnosed with epidemic parotiditis. The first phase of the diagnostic procedure for an acute cheek swelling is to eliminate the possibility of odontogenic causes. When odontogenic problems have been excluded, non-dentition-related causes may be considered. An acute, progressive swelling in the preauricular area can often be attributed to an inflammation of the parotid gland, but epidemic parotiditis should also be considered. Epidemic parotiditis, or mumps, is caused by the mumps virus. Contamination occurs aerogenically. In the Netherlands, mumps vaccine is an ingredient of the governmental combined mump-measles-rubella inoculation programme. However, in recent years several small-scale parotiditis epidemics have broken out, predominantly among young, inoculated adults. Oropharyngeal mucus and blood samples are needed to diagnose the disease. Each case of the disease should be reported to the community healthcare service.

BAIK– PROGRAMMING LANGUAGE BASED ON INDONESIAN LEXICAL PARSING FOR MULTITIER WEB DEVELOPMENT

Directory of Open Access Journals (Sweden)

Haris Hasanudin

2012-05-01

Full Text Available Business software development with global team is increasing rapidly and the programming language as development tool takes the important role in the global web development. The real user friendly programming language should be written in local language for programmer who has native language is not in English. This paper presents our design of BAIK (Bahasa Anak Indonesia untuk Komputerscripting language which syntax is modeled with Bahasa Indonesian for multitier web development. Researcher propose the implementation of Indonesian Parsing Engine and Binary Search Tree structure for memory allocation of variable and compose the language features that support basic Object Oriented Programming, Common Gateway Interface, HTML style manipulation and database connection. Our goal is to build real programming language from simple structure design for web development using Indonesian lexical words. Pengembangan bisnis perangkat lunak dalam tim berskala global meningkat dengan cepat dan bahasa pemrograman berperan penting dalam pengembangan web secara global. Bahasa pemrograman yang benar-benar ramah terhadap pengguna harus ditulis dalam bahasa lokal programmer yang bahasa ibunya bukan Bahasa Inggris. Paper ini menyajikan desain dari bahasa penulisan BAIK (Bahasa Anak Indonesia untuk Komputer, yang sintaksisnya dimodelkan dengan Bahasa Indonesia untuk pengembangan web multitier. Peneliti mengusulkan implementasi dari parsing engine Bahasa Indonesia dan struktur binary search tree untuk alokasi memori terhadap variabel, serta membuat fitur bahasa yang mendukung dasar pemrograman berbasis objek, common gateway interface, manipulasi gaya HTML, dan koneksi basis data. Tujuan penelitian ini adalah untuk menciptakan bahasa pemrograman yang sesungguhnya dan menggunakan desain struktur sederhana untuk pengembangan web dengan menggunakan kata-kata dari Bahasa Indonesia.

Concurrency can drive an HIV epidemic by moving R0 across the epidemic threshold

NARCIS (Netherlands)

Leung, Ka Yin; Kretzschmar, Mirjam

2015-01-01

OBJECTIVE: The objective of this study is to investigate whether concurrency can drive an HIV epidemic by moving R0 across the epidemic threshold. DESIGN AND METHODS: We use a mathematical framework for a dynamic partnership network and the spread of a one-stage infection to study how concurrency is

Influence of inert fillers on shrinkage cracking of meta-kaolin geo-polymers

International Nuclear Information System (INIS)

Kuenzel, C.; Boccaccini, A.R.

2012-01-01

Geo-polymers contain a network of tetrahedral coordinated aluminate and silicate, and are potential materials to immobilize/encapsulate nuclear wastes. They can exhibit shrinkage cracking when water is removed by drying, and in order to use geo-polymers for waste encapsulation this effect needs to be investigated and controlled. In this study, six different fillers were mixed with meta-kaolin and sodium silicate solution at high pH to form geo-polymers, and the influence of filler addition on mechanical properties has been determined. The fillers used were Fe 2 O 3 , Al 2 O 3 , CaCO 3 , sand, glass and rubber and these do not react during geo-polymerisation reactions. Geo-polymers were prepared containing 30 weight percent of filler. The mechanical properties of the geo-polymers were influenced by the type of filler, with low density fillers increasing mortar viscosity. Geo-polymer samples containing fine filler particles exhibited shrinkage cracking on drying. This was not observed when coarser particles were added and these samples also had significantly improved mechanical properties. (authors)

Influence of Media on Seasonal Influenza Epidemic Curves.

Science.gov (United States)

Saito, Satoshi; Saito, Norihiro; Itoga, Masamichi; Ozaki, Hiromi; Kimura, Toshiyuki; Okamura, Yuji; Murakami, Hiroshi; Kayaba, Hiroyuki

2016-09-01

Theoretical investigations predicting the epidemic curves of seasonal influenza have been demonstrated so far; however, there is little empirical research using ever accumulated epidemic curves. The effects of vaccine coverage and information distribution on influenza epidemics were evaluated. Four indices for epidemics (i.e., onset-peak duration, onset-end duration, ratio of the onset-peak duration to onset-end duration and steepness of epidemic curves) were defined, and the correlations between these indices and anti-flu drug prescription dose, vaccine coverage, the volume of media and search trend on influenza through internet were analyzed. Epidemiological data on seasonal influenza epidemics from 2002/2003 to 2013/2014 excluding 2009/2010 season were collected from National Institute of Infectious Diseases of Japan. The onset-peak duration and its ratio to onset-end duration correlated inversely with the volume of anti-flu drug prescription. Onset-peak duration correlated positively with media information volume on influenza. The steepness of the epidemic curve, and anti-flu drug prescription dose inversely correlated with the volume of media information. Pre-epidemic search trend and media volume on influenza correlated with the vaccine coverage in the season. Vaccine coverage had no strong effect on epidemic curve. Education through media has an effect on the epidemic curve of seasonal influenza. Copyright © 2016 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Oxygen transport and GeO2 stability during thermal oxidation of Ge

Science.gov (United States)

da Silva, S. R. M.; Rolim, G. K.; Soares, G. V.; Baumvol, I. J. R.; Krug, C.; Miotti, L.; Freire, F. L.; da Costa, M. E. H. M.; Radtke, C.

2012-05-01

Oxygen transport during thermal oxidation of Ge and desorption of the formed Ge oxide are investigated. Higher oxidation temperatures and lower oxygen pressures promote GeO desorption. An appreciable fraction of oxidized Ge desorbs during the growth of a GeO2 layer. The interplay between oxygen desorption and incorporation results in the exchange of O originally present in GeO2 by O from the gas phase throughout the oxide layer. This process is mediated by O vacancies generated at the GeO2/Ge interface. The formation of a substoichiometric oxide is shown to have direct relation with the GeO desorption.

Ebola epidemic--Liberia, March-October 2014.

Science.gov (United States)

Nyenswah, Tolbert; Fahnbulleh, Miatta; Massaquoi, Moses; Nagbe, Thomas; Bawo, Luke; Falla, James Dorbor; Kohar, Henry; Gasasira, Alex; Nabeth, Pierre; Yett, Sheldon; Gergonne, Bernadette; Casey, Sean; Espinosa, Benjamin; McCoy, Andrea; Feldman, Heinz; Hensley, Lisa; Baily, Mark; Fields, Barry; Lo, Terrence; Lindblade, Kim; Mott, Josh; Boulanger, Lucy; Christie, Athalia; Wang, Susan; Montgomery, Joel; Mahoney, Frank

2014-11-21

On March 21, 2014, the Guinea Ministry of Health reported the outbreak of an illness characterized by fever, severe diarrhea, vomiting and a high fatality rate (59%), leading to the first known epidemic of Ebola virus disease (Ebola) in West Africa and the largest and longest Ebola epidemic in history. As of November 2, Liberia had reported the largest number of cases (6,525) and deaths (2,697) among the three affected countries of West Africa with ongoing transmission (Guinea, Liberia, and Sierra Leone). The response strategy in Liberia has included management of the epidemic through an incident management system (IMS) in which the activities of all partners are coordinated. Within the IMS, key strategies for epidemic control include surveillance, case investigation, laboratory confirmation, contact tracing, safe transportation of persons with suspected Ebola, isolation, infection control within the health care system, community engagement, and safe burial. This report provides a brief overview of the progression of the epidemic in Liberia and summarizes the interventions implemented.

Formulation of caesium based and caesium containing geo-polymers

Energy Technology Data Exchange (ETDEWEB)

Berger, S.; Joussot-Dubien, C.; Frizon, F. [CEA Valrho, Dir. de l' Energie Nucleaire, DEN, Decontamination and Conditioning Department, DEN/DTCD/SPDE/L2ED, 30 - Marcoule (France)

2009-10-15

Cement encapsulation is widely used as a low- and intermediate level radioactive waste immobilisation process. Among these wastes, caesium ions are poorly immobilised by Portland cement based materials. This work consists of an experimental investigation into the ability of geo-polymers to effectively encapsulate this chemical species and to determine the impact of caesium incorporation on the geo-polymer properties. Geo-polymers were synthesised with several compositions based on the activation of metakaolin with an alkali hydroxide solution containing caesium. The setting time, mineralogy, porosity and mechanical properties of the samples were examined for one month. Leach tests were conducted during the same period to determine the immobilisation efficiency. The results depend to a large extent on the composition of the activation solution in terms of soluble silica content and alkali used. These parameters determine both the degree of condensation and the geo-polymer composition. (authors)

Formulation of caesium based and caesium containing geo-polymers

International Nuclear Information System (INIS)

Berger, S.; Joussot-Dubien, C.; Frizon, F.

2009-01-01

Cement encapsulation is widely used as a low- and intermediate level radioactive waste immobilisation process. Among these wastes, caesium ions are poorly immobilised by Portland cement based materials. This work consists of an experimental investigation into the ability of geo-polymers to effectively encapsulate this chemical species and to determine the impact of caesium incorporation on the geo-polymer properties. Geo-polymers were synthesised with several compositions based on the activation of metakaolin with an alkali hydroxide solution containing caesium. The setting time, mineralogy, porosity and mechanical properties of the samples were examined for one month. Leach tests were conducted during the same period to determine the immobilisation efficiency. The results depend to a large extent on the composition of the activation solution in terms of soluble silica content and alkali used. These parameters determine both the degree of condensation and the geo-polymer composition. (authors)

Parsing (malicious pleasures: Schadenfreude and gloating at others’ adversity

Directory of Open Access Journals (Sweden)

Colin Wayne Leach

2015-02-01

Full Text Available We offer the first empirical comparison of the pleasure in seeing (i.e., schadenfreude and in causing (i.e., gloating others’ adversity. In Study 1, we asked participants to recall and report on an (individual or group episode of pleasure that conformed to our formal definition of schadenfreude, gloating, pride, or joy, without reference to an emotion word. Schadenfreude and gloating were distinct in the situational features of the episode, participants’ appraisals of it, and their expressions of pleasure (e.g., smiling, boasting. In Study 2, we had participants imagine being in an (individual or group emotion episode designed to fit our conceptualization of schadenfreude or gloating. Individual and group versions of the emotions did not differ much in either study. However, the two pleasures differed greatly in their situational features, appraisals, experience, and expression. This parsing of the particular pleasures of schadenfreude and gloating brings nuance to the study of (malicious pleasure, which tends to be less finely conceptualized and examined than displeasure despite its importance to social relations.

Epidemic Spreading with Heterogeneous Awareness on Human Networks

Directory of Open Access Journals (Sweden)

Yanling Lu

2017-01-01

Full Text Available The spontaneous awareness behavioral responses of individuals have a significant impact on epidemic spreading. In this paper, a modified Susceptible-Alert-Infected-Susceptible (SAIS epidemic model with heterogeneous awareness is presented to study epidemic spreading in human networks and the impact of heterogeneous awareness on epidemic dynamics. In this model, when susceptible individuals receive awareness information about the presence of epidemic from their infected neighbor nodes, they will become alert individuals with heterogeneous awareness rate. Theoretical analysis and numerical simulations show that heterogeneous awareness can enhance the epidemic threshold with certain conditions and reduce the scale of virus outbreaks compared with no awareness. What is more, for the same awareness parameter, it also shows that heterogeneous awareness can slow effectively the spreading size and does not delay the arrival time of epidemic spreading peak compared with homogeneous awareness.

Analysis of CO in the tropical troposphere using Aura satellite data and the GEOS-Chem model: insights into transport characteristics of the GEOS meteorological products

Directory of Open Access Journals (Sweden)

Junhua Liu

2010-12-01

Full Text Available We use the GEOS-Chem chemistry-transport model (CTM to interpret the spatial and temporal variations of tropical tropospheric CO observed by the Microwave Limb Sounder (MLS and the Tropospheric Emission Spectrometer (TES. In so doing, we diagnose and evaluate transport in the GEOS-4 and GEOS-5 assimilated meteorological fields that drive the model, with a particular focus on vertical mixing at the end of the dry season when convection moves over the source regions. The results indicate that over South America, deep convection in both GEOS-4 and GEOS-5 decays at too low an altitude early in the wet season, and the source of CO from isoprene in the model (MEGAN v2.1 is too large, causing a lag in the model's seasonal maximum of CO compared to MLS CO in the upper troposphere (UT. TES and MLS data reveal problems with excessive transport of CO to the eastern equatorial Pacific and lofting in the ITCZ in August and September, particularly in GEOS-4. Over southern Africa, GEOS-4 and GEOS-5 simulations match the phase of the observed CO variation from the lower troposphere (LT to the UT fairly well, although the magnitude of the seasonal maximum is underestimated considerably due to low emissions in the model. A sensitivity run with increased emissions leads to improved agreement with observed CO in the LT and middle troposphere (MT, but the amplitude of the seasonal variation is too high in the UT in GEOS-4. Difficulty in matching CO in the LT and UT implies there may be overly vigorous vertical mixing in GEOS-4 early in the wet season. Both simulations and observations show a time lag between the peak in fire emissions (July and August and in CO (September and October. We argue that it is caused by the prevailing subsidence in the LT until convection moves south in September, as well as the low sensitivity of TES data in the LT over the African Plateau. The MLS data suggest that too much CO has been transported from fires in northern Africa to the UT

Epidemics in adaptive networks with community structure

Science.gov (United States)

Shaw, Leah; Tunc, Ilker

2010-03-01

Models for epidemic spread on static social networks do not account for changes in individuals' social interactions. Recent studies of adaptive networks have modeled avoidance behavior, as non-infected individuals try to avoid contact with infectives. Such models have not generally included realistic social structure. Here we study epidemic spread on an adaptive network with community structure. We model the effect of heterogeneous communities on infection levels and epidemic extinction. We also show how an epidemic can alter the community structure.

The geo-reactor. A link between nuclear fission and geothermal energy?

International Nuclear Information System (INIS)

Degueldre, Claude; Fiorina, Carlo

2013-01-01

Recent high-precision isotope analysis data suggests the potential occurrence of a geo-reactor. Specific gas isotopes that could have been generated by binary and ternary fissions were identified in volcano emanations or as soluble/associated species in crystalline rocks and semi-quantitatively evaluated as isotopic ratio or estimated amounts. Presently if it is evident that according to the actinide inventory on the Earth, local potential criticality of the geo-system may have been reached, several questions remain such as why, where and when did a geo-reactor be operational? Even if the hypothesis of a geo-reactor operation in the proto-Earth period should be acceptable, it could be difficult to anticipate that a geo-reactor is still operating today. This could be tested in the future by assessing and reconstructing the system by antineutrino detection and tomography through the Earth. The present paper focuses on the geo-reactor conditions including history, spatial extension and regimes. The discussion based on recent calculations involves investigations on the limits in term of fissile inventory, size and power, based on stratification through the gravitational field and the various features through the inner mantel, the boundary with the core, the external part and the inner-core. the reconstruction allows to formulating that from the history point of view there are possibilities that the geo-reactor reached criticality in a proto-Earth period as a thorium/uranium reactor triggered by an under-layer with heavier actinides. The geo-reactor should be a key component of geothermal energy sources. (author)

Geo synthetics in hydraulic and coastal engineering: Filters, revetments and sand filled structures

International Nuclear Information System (INIS)

Bezuijen, A.; Pilarczyk, K. W.

2014-01-01

The paper deals with 2 applications of geo textiles in coastal and hydraulic engineering: Geo textiles in filters and revetments; and geo textiles in sand filled structure. Geo textiles are often replacing granular filters. However, they have different properties than a granular filter. For the application of geo textiles in revetments, the consequences of the different properties will be shown: how permeability is influenced by a geo textile and what can be the consequences of the weight differences between granular and geo textile filters. In the other application, the filter properties of geo textiles are only secondary. In geo textile tubes and containers the geo textile is used as wrapping material to create large unties that will not erode during wave attach. the structures with geo textile tubes and containers serve as an alternative for rock based structures. The first of these structures were more or less constructed by trial and error, but research on the shape of the structures, the stability under wave attach and the durability of the used of the used material has given the possibility to use design tools for these structures. Recently also the morphological aspects of these structures have been investigated. This is of importance because regularly structures with geo textile tubes fail due to insufficient toe protection against the scour hole that that develops in front of the structure, leading to undermining of the structure. Recent research in the Dealt Flume of Deltares and the Large Wave Flume in Hannover has led to better understanding what mechanisms determine the stability under wave attach. It is shown that also the degree of filling is of importance and the position of the water level with respect to the tube has a large influence. (Author)

Design, Implementation and Applications of 3d Web-Services in DB4GEO

Science.gov (United States)

Breunig, M.; Kuper, P. V.; Dittrich, A.; Wild, P.; Butwilowski, E.; Al-Doori, M.

2013-09-01

The object-oriented database architecture DB4GeO was originally designed to support sub-surface applications in the geo-sciences. This is reflected in DB4GeO's geometric data model as well as in its import and export functions. Initially, these functions were designed for communication with 3D geological modeling and visualization tools such as GOCAD or MeshLab. However, it soon became clear that DB4GeO was suitable for a much wider range of applications. Therefore it is natural to move away from a standalone solution and to open the access to DB4GeO data by standardized OGC web-services. Though REST and OGC services seem incompatible at first sight, the implementation in DB4GeO shows that OGC-based implementation of web-services may use parts of the DB4GeO-REST implementation. Starting with initial solutions in the history of DB4GeO, this paper will introduce the design, adaptation (i.e. model transformation), and first steps in the implementation of OGC Web Feature (WFS) and Web Processing Services (WPS), as new interfaces to DB4GeO data and operations. Among its capabilities, DB4GeO can provide data in different data formats like GML, GOCAD, or DB3D XML through a WFS, as well as its ability to run operations like a 3D-to-2D service, or mesh-simplification (Progressive Meshes) through a WPS. We then demonstrate, an Android-based mobile 3D augmented reality viewer for DB4GeO that uses the Web Feature Service to visualize 3D geo-database query results. Finally, we explore future research work considering DB4GeO in the framework of the research group "Computer-Aided Collaborative Subway Track Planning in Multi-Scale 3D City and Building Models".

Geo-Enabled, Mobile Services

DEFF Research Database (Denmark)

Jensen, Christian Søndergaard

2006-01-01

We are witnessing the emergence of a global infrastructure that enables the widespread deployment of geo-enabled, mobile services in practice. At the same time, the research community has also paid increasing attention to data management aspects of mobile services. This paper offers me...

Epidemic processes in complex networks

Science.gov (United States)

Pastor-Satorras, Romualdo; Castellano, Claudio; Van Mieghem, Piet; Vespignani, Alessandro

2015-07-01

In recent years the research community has accumulated overwhelming evidence for the emergence of complex and heterogeneous connectivity patterns in a wide range of biological and sociotechnical systems. The complex properties of real-world networks have a profound impact on the behavior of equilibrium and nonequilibrium phenomena occurring in various systems, and the study of epidemic spreading is central to our understanding of the unfolding of dynamical processes in complex networks. The theoretical analysis of epidemic spreading in heterogeneous networks requires the development of novel analytical frameworks, and it has produced results of conceptual and practical relevance. A coherent and comprehensive review of the vast research activity concerning epidemic processes is presented, detailing the successful theoretical approaches as well as making their limits and assumptions clear. Physicists, mathematicians, epidemiologists, computer, and social scientists share a common interest in studying epidemic spreading and rely on similar models for the description of the diffusion of pathogens, knowledge, and innovation. For this reason, while focusing on the main results and the paradigmatic models in infectious disease modeling, the major results concerning generalized social contagion processes are also presented. Finally, the research activity at the forefront in the study of epidemic spreading in coevolving, coupled, and time-varying networks is reported.

Penn State geoPebble system: Design,Implementation, and Initial Results

Science.gov (United States)

Urbina, J. V.; Anandakrishnan, S.; Bilen, S. G.; Fleishman, A.; Burkett, P.

2014-12-01

The Penn State geoPebble system is a new network of wirelessly interconnected seismic and GPS sensor nodes with flexible architecture. This network will be used for studies of ice sheets in Antarctica and Greenland, as well as to investigate mountain glaciers. The network will consist of ˜150 geoPebbles that can be deployed in a user-defined spatial geometry. We present our design methodology, which has enabled us to develop these state-of- the art sensors using commercial-off-the-shelf hardware combined with custom-designed hardware and software. Each geoPebble is a self- contained, wirelessly connected sensor for collecting seismic measurements and position information. Key elements of each node encompasses a three-component seismic recorder, which includes an amplifier, filter, and 24- bit analog-to-digital converter that can sample up to 10 kHz. Each unit also includes a microphone channel to record the ground-coupled airwave. The timing for each node is available from GPS measurements and a local precision oscillator that is conditioned by the GPS timing pulses. In addition, we record the carrier-phase measurement of the L1 GPS signal in order to determine location at sub-decimeter accuracy (relative to other geoPebbles within a few kilometers radius). Each geoPebble includes 16 GB of solid-state storage, wireless communications capability to a central supervisory unit, and auxiliary measurements capability (including tilt from accelerometers, absolute orientation from magnetometers and temperature). A novel aspect of the geoPebble is a wireless charging system for the internal battery (using inductive coupling techniques). The geoPebbles include all the sensors (geophones, GPS, microphone), communications (WiFi), and power (battery and charging) internally, so the geoPebble system can operate without any cabling connections (though we do provide an external connector so that different geophones can be used). We report initial field-deployment results and

An epidemic model for the future progression of the current Haiti cholera epidemic

Science.gov (United States)

Bertuzzo, E.; Mari, L.; Righetto, L.; Casagrandi, R.; Gatto, M.; Rodriguez-Iturbe, I.; Rinaldo, A.

2012-04-01

As a major cholera epidemic progresses in Haiti, and the figures of the infection, up to December 2011, climb to 522,000 cases and 7,000 deaths, the development of general models to track and predict the evolution of the outbreak, so as to guide the allocation of medical supplies and staff, is gaining notable urgency. We propose here a spatially explicit epidemic model that accounts for the dynamics of susceptible and infected individuals as well as the redistribution of Vibrio cholera, the causative agent of the disease, among different human communities. In particular, we model two spreading pathways: the advection of pathogens through hydrologic connections and the dissemination due to human mobility described by means of a gravity-like model. To this end the country has been divided into hydrologic units based on drainage directions derived from a digital terrain model. Moreover the population of each unit has been estimated from census data downscaled to 1 km x 1 km resolution via remotely sensed geomorphological information (LandScan project). The model directly accounts for the role of rainfall patterns in driving the seasonality of cholera outbreaks. The two main outbreaks in fact occurred during the rainy seasons (October and May) when extensive floodings severely worsened the sanitation conditions and, in turn, raised the risk of infection. The model capability to reproduce the spatiotemporal features of the epidemic up to date grants robustness to the foreseen future development. To this end, we generate realistic scenario of future precipitation in order to forecast possible epidemic paths up to the end of the 2013. In this context, the duration of acquired immunity, a hotly debated topic in the scientific community, emerges as a controlling factor for progression of the epidemic in the near future. The framework presented here can straightforwardly be used to evaluate the effectiveness of alternative intervention strategies like mass vaccinations

Investigation Antiwear Properties of Lubricants with the Geo-Modifiers of Friction

Directory of Open Access Journals (Sweden)

I. Levanov

2017-09-01

Full Text Available The article describes the influence of the geo-modifiers of friction on the antiwear properties of lubricants. Geo-modifiers of friction are the fine powders of mineral materials. This work is directed on the investigation the influence of the geo-modifiers of friction in the form of the hard lubricant compositions, which based on a mineral serpentine, on the anti-wear properties of greases and gear oils. This composition is the fine powder serpentine with the addition of components such as chalk, borax, kaolin and talc. We compared the antiwear properties of the greases without geo-modifiers of friction and the antiwear properties of greases containing the geo-modifiers of friction from 0.5 % to 3 %. The Litol-24 and transmission oil TAD-17 was used for testihg. The four-ball machine of friction was used for tests accordance with GOST 9490-75. As geo-modifiers the serpentine was used, the fraction of which has a size from 0.87 microns to 2.2 microns. Such parameter as the wear scar diameter was used for evaluation of the antiwear properties of lubricants. As a result of tests it was established that the antiwear greases properties improved on 26-50 % depending on the concentration of the geo-modifiers of friction based on the pure serpentine.

Epidemic cholera spreads like wildfire

Science.gov (United States)

Roy, Manojit; Zinck, Richard D.; Bouma, Menno J.; Pascual, Mercedes

2014-01-01

Cholera is on the rise globally, especially epidemic cholera which is characterized by intermittent and unpredictable outbreaks that punctuate periods of regional disease fade-out. These epidemic dynamics remain however poorly understood. Here we examine records for epidemic cholera over both contemporary and historical timelines, from Africa (1990-2006) and former British India (1882-1939). We find that the frequency distribution of outbreak size is fat-tailed, scaling approximately as a power-law. This pattern which shows strong parallels with wildfires is incompatible with existing cholera models developed for endemic regions, as it implies a fundamental role for stochastic transmission and local depletion of susceptible hosts. Application of a recently developed forest-fire model indicates that epidemic cholera dynamics are located above a critical phase transition and propagate in similar ways to aggressive wildfires. These findings have implications for the effectiveness of control measures and the mechanisms that ultimately limit the size of outbreaks.

Contact allergy epidemics and their controls

DEFF Research Database (Denmark)

Thyssen, Jacob Pontoppidan; Johansen, Jeanne Duus; Menné, Torkil

2007-01-01

Contact dermatitis can be severe and lead to sick leave as well as significant healthcare expenses. The aim of this review is to present the published knowledge on 6 historical epidemics of contact allergy to apply this knowledge on the prevention and control of future contact allergy epidemics. ...... to prevent contact allergy epidemics. It is essential that dermatologist, scientists, administrators, and consumers organize and structure known methods to accelerate the control of emerging contact allergens....

SpeciesGeoCoder: Fast Categorization of Species Occurrences for Analyses of Biodiversity, Biogeography, Ecology, and Evolution.

Science.gov (United States)

Töpel, Mats; Zizka, Alexander; Calió, Maria Fernanda; Scharn, Ruud; Silvestro, Daniele; Antonelli, Alexandre

2017-03-01

Understanding the patterns and processes underlying the uneven distribution of biodiversity across space constitutes a major scientific challenge in systematic biology and biogeography, which largely relies on effectively mapping and making sense of rapidly increasing species occurrence data. There is thus an urgent need for making the process of coding species into spatial units faster, automated, transparent, and reproducible. Here we present SpeciesGeoCoder, an open-source software package written in Python and R, that allows for easy coding of species into user-defined operational units. These units may be of any size and be purely spatial (i.e., polygons) such as countries and states, conservation areas, biomes, islands, biodiversity hotspots, and areas of endemism, but may also include elevation ranges. This flexibility allows scoring species into complex categories, such as those encountered in topographically and ecologically heterogeneous landscapes. In addition, SpeciesGeoCoder can be used to facilitate sorting and cleaning of occurrence data obtained from online databases, and for testing the impact of incorrect identification of specimens on the spatial coding of species. The various outputs of SpeciesGeoCoder include quantitative biodiversity statistics, global and local distribution maps, and files that can be used directly in many phylogeny-based applications for ancestral range reconstruction, investigations of biome evolution, and other comparative methods. Our simulations indicate that even datasets containing hundreds of millions of records can be analyzed in relatively short time using a standard computer. We exemplify the use of SpeciesGeoCoder by inferring the historical dispersal of birds across the Isthmus of Panama, showing that lowland species crossed the Isthmus about twice as frequently as montane species with a marked increase in the number of dispersals during the last 10 million years. [ancestral area reconstruction; biodiversity

Can rewiring strategy control the epidemic spreading?

Science.gov (United States)

Dong, Chao; Yin, Qiuju; Liu, Wenyang; Yan, Zhijun; Shi, Tianyu

2015-11-01

Relation existed in the social contact network can affect individuals' behaviors greatly. Considering the diversity of relation intimacy among network nodes, an epidemic propagation model is proposed by incorporating the link-breaking threshold, which is normally neglected in the rewiring strategy. The impact of rewiring strategy on the epidemic spreading in the weighted adaptive network is explored. The results show that the rewiring strategy cannot always control the epidemic prevalence, especially when the link-breaking threshold is low. Meanwhile, as well as strong links, weak links also play a significant role on epidemic spreading.

A fully distributed geo-routing scheme for wireless sensor networks

KAUST Repository

Bader, Ahmed

2013-12-01

When marrying randomized distributed space-time coding (RDSTC) to beaconless geo-routing, new performance horizons can be created. In order to reach those horizons, however, beaconless geo-routing protocols must evolve to operate in a fully distributed fashion. In this letter, we expose a technique to construct a fully distributed geo-routing scheme in conjunction with RDSTC. We then demonstrate the performance gains of this novel scheme by comparing it to one of the prominent classical schemes. © 2013 IEEE.

A fully distributed geo-routing scheme for wireless sensor networks

KAUST Repository

Bader, Ahmed; Abed-Meraim, Karim; Alouini, Mohamed-Slim

2013-01-01

When marrying randomized distributed space-time coding (RDSTC) to beaconless geo-routing, new performance horizons can be created. In order to reach those horizons, however, beaconless geo-routing protocols must evolve to operate in a fully distributed fashion. In this letter, we expose a technique to construct a fully distributed geo-routing scheme in conjunction with RDSTC. We then demonstrate the performance gains of this novel scheme by comparing it to one of the prominent classical schemes. © 2013 IEEE.

Specific Space Transportation Costs to GEO - Past, Present and Future

Science.gov (United States)

Koelle, Dietrich E.

2002-01-01

The largest share of space missions is going to the Geosynchronous Orbit (GEO); they have the highest commercial importance. The paper first shows the historic trend of specific transportation costs to GEO from 1963 to 2002. It started out with more than 500 000 /kg(2002-value) and has come down to 36 000 /kg. This reduction looks impressive, however, the reason is NOT improved technology or new techniques but solely the growth of GEO payloads`unit mass. The first GEO satellite in 1963 did have a mass of 36 kg mass (BoL) . This has grown to a weight of 1600 kg (average of all GEO satellites) in the year 2000. Mass in GEO after injection is used here instead of GTO mass since the GTO mass depends on the launch site latitude. The specific cost reduction is only due to the "law-of-scale", valid in the whole transportation business: the larger the payload, the lower the specific transportation cost. The paper shows the actual prices of launch services to GTO by the major launch vehicles. Finally the potential GEO transportation costs of future launch systems are evaluated. What is the potential reduction of specific transportation costs if reusable elements are introduced in future systems ? Examples show that cost reductions up to 75 % seem achievable - compared to actual costs - but only with launch systems optimized according to modern principles of cost engineering. 1. 53rd International Astronautical Congress, World Space Congress Houston 2. First Submission 3. Specific Space Transportation Costs to GEO - Past, Present and Future 4. KOELLE, D.E. 5. IAA.1.1 Launch Vehicles' Cost Engineering and Economic Competitiveness 6. D.E. Koelle; A.E. Goldstein 7. One overhead projector and screen 8. Word file attached 9. KOELLE I have approval to attend the Congress. I am not willing to present this paper at the IAC Public Outreach Program.

Managing and delivering of 3D geo data across institutions has a web based solution - intermediate results of the project GeoMol.

Science.gov (United States)

Gietzel, Jan; Schaeben, Helmut; Gabriel, Paul

2014-05-01

The increasing relevance of geological information for policy and economy at transnational level has recently been recognized by the European Commission, who has called for harmonized information related to reserves and resources in the EU Member States. GeoMol's transnational approach responds to that, providing consistent and seamless 3D geological information of the Alpine Foreland Basins based on harmonized data and agreed methodologies. However, until recently no adequate tool existed to ensure full interoperability among the involved GSOs and to distribute the multi-dimensional information of a transnational project facing diverse data policy, data base systems and software solutions. In recent years (open) standards describing 2D spatial data have been developed and implemented in different software systems including production environments for 2D spatial data (like regular 2D-GI-Systems). Easy yet secured access to the data is of upmost importance and thus priority for any spatial data infrastructure. To overcome limitations conditioned by highly sophisticated and platform dependent geo modeling software packages functionalities of a web portals can be utilized. Thus, combining a web portal with a "check-in-check-out" system allows distributed organized editing of data and models but requires standards for the exchange of 3D geological information to ensure interoperability. Another major concern is the management of large models and the ability of 3D tiling into spatially restricted models with refined resolution, especially when creating countrywide models . Using GST ("Geosciences in Space and Time") developed initially at TU Bergakademie Freiberg and continuously extended by the company GiGa infosystems, incorporating these key issues and based on an object-relational data model, it is possible to check out parts or whole models for edits and check in again after modification. GST is the core of GeoMol's web-based collaborative environment designed to

Thallium pollution in China: A geo-environmental perspective.

Science.gov (United States)

Xiao, Tangfu; Yang, Fei; Li, Shehong; Zheng, Baoshan; Ning, Zengping

2012-04-01

It is well known that thallium (Tl) is a non-essential and toxic metal to human health, but less is known about the geo-environmentally-induced Tl pollution and its associated health impacts. High concentrations of Tl that are primarily associated with the epithermal metallogenesis of sulfide minerals have the potential of producing Tl pollution in the environment, which has been recognized as an emerging pollutant in China. This paper aims to review the research progress in China on Tl pollution in terms of the source, mobility, transportation pathway, and health exposure of Tl and to address the environmental concerns on Tl pollution in a geo-environmental perspective. Tl associated with the epithermal metallogenesis of sulfide minerals has been documented to disperse readily and accumulate through the geo-environmental processes of soil enrichment, water transportation and food crop growth beyond a mineralized zone. The enrichments of Tl in local soil, water, and crops may result in Tl pollution and consequent adverse health effects, e.g. chronic Tl poisoning. Investigation of the baseline Tl in the geo-environment, proper land use and health-related environmental planning and regulation are critical to prevent the Tl pollution. Examination of the human urinary Tl concentration is a quick approach to identify exposure of Tl pollution to humans. The experiences of Tl pollution in China can provide important lessons for many other regions in the world with similar geo-environmental contexts because of the high mobility and toxicity of Tl. Copyright © 2011 Elsevier B.V. All rights reserved.

Geo synthetic-reinforced Pavement systems; Sistemas de pavimentos reforzados con geosinteticos

Energy Technology Data Exchange (ETDEWEB)

Zornberg, J. G.

2014-02-01

Geo synthetics have been used as reinforcement inclusions to improve pavement performance. while there are clear field evidence of the benefit of using geo synthetic reinforcements, the specific conditions or mechanisms that govern the reinforcement of pavements are, at best, unclear and have remained largely unmeasured. Significant research has been recently conducted with the objectives of: (i) determining the relevant properties of geo synthetics that contribute to the enhanced performance of pavement systems, (ii) developing appropriate analytical, laboratory and field methods capable of quantifying the pavement performance, and (iii) enabling the prediction of pavement performance as a function of the properties of the various types of geo synthetics. (Author)

GEO Supersites Data Exploitation Platform

Science.gov (United States)

Lengert, W.; Popp, H.-J.; Gleyzes, J.-P.

2012-04-01

In the framework of the GEO Geohazard Supersite initiative, an international partnership of organizations and scientists involved in the monitoring and assessment of geohazards has been established. The mission is to advance the scientific understanding of geohazards by improving geohazard monitoring through the combination of in-situ and space-based data, and by facilitating the access to data relevant for geohazard research. The stakeholders are: (1) governmental organizations or research institutions responsible for the ground-based monitoring of earthquake and volcanic areas, (2) space agencies and satellite operators providing satellite data, (3) the global geohazard scientific community. The 10.000's of ESA's SAR products are accessible, since beginning 2008, using ESA's "Virtual Archive", a Cloud Computing assets, allowing the global community an utmost downloading performance of these high volume data sets for mass-market costs. In the GEO collaborative context, the management of ESA's "Virtual Archive" and the ordering of these large data sets is being performed by UNAVCO, who is also coordinating the data demand for the several hundreds of co-PIs. ESA is envisaging to provide scientists and developers access to a highly elastic operational e-infrastructure, providing interdisciplinary data on a large scale as well as tools ensuring innovation and a permanent evolution of the products. Consequently, this science environment will help in defining and testing new applications and technologies fostering innovation and new science findings. In Europe, the collaboration between EPOS, "European Plate Observatory System" lead by INGV, and ESA with support of DLR, ASI, and CNES are the main institutional stakeholders for the GEO Supersites contributing also to a unifying e-infrastructure. The overarching objective of the Geohazard Supersites is: "To implement a sustainable Global Earthquake Observation System and a Global Volcano Observation System as part of the

Defining and detecting malaria epidemics in south-east Iran.

Science.gov (United States)

McKelvie, William R; Haghdoost, Ali Akbar; Raeisi, Ahmad

2012-03-23

A lack of consensus on how to define malaria epidemics has impeded the evaluation of early detection systems. This study aimed to develop local definitions of malaria epidemics in a known malarious area of Iran, and to use that definition to evaluate the validity of several epidemic alert thresholds. Epidemic definition variables generated from surveillance data were plotted against weekly malaria counts to assess which most accurately labelled aberrations. Various alert thresholds were then generated from weekly counts or log counts. Finally, the best epidemic definition was used to calculate and compare sensitivities, specificities, detection delays, and areas under ROC curves of the alert thresholds. The best epidemic definition used a minimum duration of four weeks and week-specific and overall smoothed geometric means plus 1.0 standard deviation. It defined 13 epidemics. A modified C-SUM alert of untransformed weekly counts using a threshold of mean+0.25 SD had the highest combined sensitivity and specificity. Untransformed C-SUM alerts also had the highest area under the ROC curve. Defining local malaria epidemics using objective criteria facilitated the evaluation of alert thresholds. This approach needs further study to refine epidemic definitions and prospectively evaluate epidemic alerts.

Geo-Seas - building a unified e-infrastructure for marine geoscientific data management in Europe

Science.gov (United States)

Glaves, H.; Schaap, D.

2012-04-01

A significant barrier to marine geoscientific research in Europe is the lack of standardised marine geological and geophysical data and data products which could potentially facilitate multidisciplinary marine research extending across national and international boundaries. Although there are large volumes of geological and geophysical data available for the marine environment it is currently very difficult to use these datasets in an integrated way due to different nomenclatures, formats, scales and coordinate systems being used within different organisations as well as between countries. This makes the direct use of primary data very difficult and also hampers use of the data to produce integrated multidisciplinary data products and services. The Geo-Seas project, an EU Framework 7 funded initiative, is developing a unified e-infrastructure to facilitate the sharing of marine geoscientific data within Europe. This e-infrastructure is providing on-line access to both discovery metadata and the associated federated data sets from 26 European data centres via a dedicated portal. The implementation of the Geo-Seas portal is allowing a range of end users to locate, assess and access standardised geoscientific data from multiple sources which is interoperable with other marine data types. Geo-Seas is building on the work already done by the existing SeaDataNet project which currently provides a data management e-infrastructure for oceanographic data which allows users to locate and access federated oceanographic data sets. By adopting and adapting the SeaDataNet methodologies and technologies the Geo-Seas project has not only avoid unnecessary duplication of effort by reusing existing and proven technologies but also contributed to the development of a multidisciplinary approach to ocean science across Europe through the creation of a joint infrastructure for both marine geoscientific and oceanographic data. This approach is also leading to the development of

Addressing key concepts in physical geography through interactive learning activities in an online geo-ICT environment

Science.gov (United States)

Verstraeten, Gert; Steegen, An; Martens, Lotte

2016-04-01

The increasing number of geospatial datasets and free online geo-ICT tools offers new opportunities for education in Earth Sciences. Geospatial technology indeed provides an environment through which interactive learning can be introduced in Earth Sciences curricula. However, the effectiveness of such e-learning approaches in terms of learning outcomes has rarely been addressed. Here, we present our experience with the implementation of digital interactive learning activities within an introductory Physical Geography course attended by 90 undergraduate students in Geography, Geology, Biology and Archaeology. Two traditional lectures were replaced by interactive sessions (each 2 h) in a flexible classroom where students had to work both in team and individually in order to explore some key concepts through the integrated use of geospatial data within Google EarthTM. A first interactive lesson dealt with the classification of river systems and aimed to examine the conditions under which rivers tend to meander or to develop a braided pattern. Students were required to collect properties of rivers (river channel pattern, channel slope, climate, discharge, lithology, vegetation, etc). All these data are available on a global scale and have been added as separate map layers in Google EarthTM. Each student collected data for at least two rivers and added this information to a Google Drive Spreadsheet accessible to the entire group. This resulted in a database of more than one hundred rivers spread over various environments worldwide. In a second phase small groups of students discussed the potential relationships between river channel pattern and its controlling factors. Afterwards, the findings of each discussion group were presented to the entire audience. The same set-up was followed in a second interactive session to explore spatial variations in ecosystem properties such as net primary production and soil carbon content. The qualitative evaluation of both interactive

Spreading in online social networks: the role of social reinforcement.

Science.gov (United States)

Zheng, Muhua; Lü, Linyuan; Zhao, Ming

2013-07-01

Some epidemic spreading models are usually applied to analyze the propagation of opinions or news. However, the dynamics of epidemic spreading and information or behavior spreading are essentially different in many aspects. Centola's experiments [Science 329, 1194 (2010)] on behavior spreading in online social networks showed that the spreading is faster and broader in regular networks than in random networks. This result contradicts with the former understanding that random networks are preferable for spreading than regular networks. To describe the spreading in online social networks, a unknown-known-approved-exhausted four-status model was proposed, which emphasizes the effect of social reinforcement and assumes that the redundant signals can improve the probability of approval (i.e., the spreading rate). Performing the model on regular and random networks, it is found that our model can well explain the results of Centola's experiments on behavior spreading and some former studies on information spreading in different parameter space. The effects of average degree and network size on behavior spreading process are further analyzed. The results again show the importance of social reinforcement and are accordant with Centola's anticipation that increasing the network size or decreasing the average degree will enlarge the difference of the density of final approved nodes between regular and random networks. Our work complements the former studies on spreading dynamics, especially the spreading in online social networks where the information usually requires individuals' confirmations before being transmitted to others.

GFFview: A Web Server for Parsing and Visualizing Annotation Information of Eukaryotic Genome.

Science.gov (United States)

Deng, Feilong; Chen, Shi-Yi; Wu, Zhou-Lin; Hu, Yongsong; Jia, Xianbo; Lai, Song-Jia

2017-10-01

Owing to wide application of RNA sequencing (RNA-seq) technology, more and more eukaryotic genomes have been extensively annotated, such as the gene structure, alternative splicing, and noncoding loci. Annotation information of genome is prevalently stored as plain text in General Feature Format (GFF), which could be hundreds or thousands Mb in size. Therefore, it is a challenge for manipulating GFF file for biologists who have no bioinformatic skill. In this study, we provide a web server (GFFview) for parsing the annotation information of eukaryotic genome and then generating statistical description of six indices for visualization. GFFview is very useful for investigating quality and difference of the de novo assembled transcriptome in RNA-seq studies.

Designing and implementing a Quality Broker: the GeoViQua experience

Science.gov (United States)

Papeschi, Fabrizio; Bigagli, Lorenzo; Masò, Joan; Nativi, Stefano

2014-05-01

GeoViQua (QUAlity aware VIsualisation for the Global Earth Observation System of Systems) is an FP7 project aiming at complementing the Global Earth Observation System of Systems (GEOSS) with rigorous data quality specifications and quality-aware capabilities, in order to improve reliability in scientific studies and policy decision-making. GeoViQua main scientific and technical objective is to enhance the GEOSS Common Infrastructure (GCI) providing the user community with innovative quality-aware search and visualization tools, which will be integrated in the GEOPortal, as well as made available to other end-user interfaces. To this end, GeoViQua will promote the extension of the current standard metadata for geographic information with accurate and expressive quality indicators. Employing and extending several ISO standards such as 19115, 19157 and 19139, a common set of data quality indicators has been selected to be used within the project. The resulting work, in the form of a data model, is expressed in XML Schema Language and encoded in XML. Quality information can be stated both by data producers and by data users, actually resulting in two conceptually distinct data models, the Producer Quality model and the User Quality model (or User Feedback model). GeoViQua architecture is built on the brokering approach successfully experimented within the EuroGEOSS project and realized by the GEO DAB (Discovery and Access Broker) which is part of the GCI. The GEO DAB allows for harmonization and distribution in a transparent way for both users and data providers. This way, GeoViQua can effectively complement and extend the GEO DAB obtaining a Quality augmentation Broker (DAB-Q) which plays a central role in ensuring the consistency of the Producer and User quality models. The GeoViQua architecture also includes a Feedback Catalog, a particular service brokered by the DAB-Q which is dedicated to the storage and discovery of user feedbacks. A very important issue

Fluid migration through geo-membrane seams and through the interface between geo-membrane and geo-synthetic clay liner; Contribution a l'etude des transferts de masse au niveau des joints de geomembrane et a l'interface entre geomembrane et geosynthetique bentonitique

Energy Technology Data Exchange (ETDEWEB)

Barroso, M

2005-03-15

Composite liners are used to limit the contamination migration from landfills. Their successful performance is closely related with the geo-membrane as it provides the primary barrier to diffusive and advective transport of contaminants. Critical issues on the performance of the geo-membranes are the seams between geo-membrane panels and the inevitable defects resulting, for instance, from inadequate installation activities. In landfills, where high density polyethylene geo-membranes are usually used, seams are typically made by the thermal-hot dual wedge method. A literature review on quality control of the seams showed that, in situ, fluid-tightness of seams is evaluated in qualitative terms (pass/failure criteria), despite their importance to ensure appropriate performance of the geo-membranes as barriers. In addition, a synthesis of studies on geo-membrane defects indicated that defects varying in density from 0.7 to 15.3 per hectare can be found in landfills. Defects represent preferential flow paths for leachate. Various authors have developed analytical solutions and empirical equations for predicting the flow rate through composite liners due to defects in the geo-membrane. The validity of these methods for composite liners comprising a geo-membrane over a geo-synthetic clay liner (GCL) over a compacted clay liner (CCL) has never been studied from an experimental point of view. To address the problem of fluid migration through the geo-membrane seams, an attempt is made to provide a test method, herein termed as 'gas permeation pouch test', for assessing the quality of the thermal-hot dual wedge seams. This test consists of pressurizing the air channel formed by the double seam with a gas to a specific pressure and, then, measuring the decrease in pressure over time. From the pressure decrease, both the gas permeation coefficients, in steady state conditions, and the time constant, in unsteady state conditions, can be estimated. Experiments were

The live service of video geo-information

Science.gov (United States)

Xue, Wu; Zhang, Yongsheng; Yu, Ying; Zhao, Ling

2016-03-01

In disaster rescue, emergency response and other occasions, traditional aerial photogrammetry is difficult to meet real-time monitoring and dynamic tracking demands. To achieve the live service of video geo-information, a system is designed and realized—an unmanned helicopter equipped with video sensor, POS, and high-band radio. This paper briefly introduced the concept and design of the system. The workflow of video geo-information live service is listed. Related experiments and some products are shown. In the end, the conclusion and outlook is given.

The GEO Handbook on Biodiversity Observation Networks

CSIR Research Space (South Africa)

Walters, Michele

2017-01-01

Full Text Available across the planet. I congratulate GEO BON on creating this powerful mechanism and wish the GEO BON community great success in each of its future endeavours. Geneva, Switzerland Barbara J. Ryan Executive Director: Group on Earth Observations viii Foreword... of biodiversity data is the desired goal, it would be hard to achieve except via the mechanism of a network, simply because 6 R.J. Scholes et al. sampling and species identification is more cost-effective and situation-appropriate if conducted using local...

Household demographic determinants of Ebola epidemic risk.

Science.gov (United States)

Adams, Ben

2016-03-07

A salient characteristic of Ebola, and some other infectious diseases such as Tuberculosis, is intense transmission among small groups of cohabitants and relatively limited indiscriminate transmission in the wider population. Here we consider a mathematical model for an Ebola epidemic in a population structured into households of equal size. We show that household size, a fundamental demographic unit, is a critical factor that determines the vulnerability of a community to epidemics, and the effort required to control them. Our analysis is based on the household reproduction number, but we also consider the basic reproduction number, intrinsic growth rate and final epidemic size. We show that, when other epidemiological parameters are kept the same, all of these quantifications of epidemic growth and size are increased by larger households and more intense within-household transmission. We go on to model epidemic control by case detection and isolation followed by household quarantine. We show that, if household quarantine is ineffective, the critical probability with which cases must be detected to halt an epidemic increases significantly with each increment in household size and may be a very challenging target for communities composed of large households. Effective quarantine may, however, mitigate the detrimental impact of large household sizes. We conclude that communities composed of large households are fundamentally more vulnerable to epidemics of infectious diseases primarily transmitted by close contact, and any assessment of control strategies for these epidemics should take into account the demographic structure of the population. Copyright © 2015 Elsevier Ltd. All rights reserved.

Variable-scale Geo-information

NARCIS (Netherlands)

Meijers, B.M.

2011-01-01

The use of geo-information is changing by the advent of new mobile devices, such as tablet-pc's that harness a lot of computing power. This type of information is more and more applied in mainstream digital consumer products, in a net-centric environment (i.e. dissemination takes place via the

Epidemic spreading in time-varying community networks.

Science.gov (United States)

Ren, Guangming; Wang, Xingyuan

2014-06-01

The spreading processes of many infectious diseases have comparable time scale as the network evolution. Here, we present a simple networks model with time-varying community structure, and investigate susceptible-infected-susceptible epidemic spreading processes in this model. By both theoretic analysis and numerical simulations, we show that the efficiency of epidemic spreading in this model depends intensively on the mobility rate q of the individuals among communities. We also find that there exists a mobility rate threshold qc. The epidemic will survive when q > qc and die when q epidemic spreading in complex networks with community structure.

Encapsulation of Mg-Zr alloy in metakaolin-based geo-polymer

International Nuclear Information System (INIS)

Rooses, Adrien; Steins, Prune; Dannoux-Papin, Adeline; Lambertin, David; Poulesquen, Arnaud; Frizon, Fabien

2013-01-01

Investigations were carried out to propose a suitable material for the encapsulation of Mg-Zr alloy wastes issued from fuel cladding of the first generation nuclear reactors. Stability over time, good mechanical properties and low gas production are the main requirements that embedding matrices must comply with in order to be suitable for long run storage. One of the main issues encapsulating Mg-Zr alloy in mineral binder is the hydrogen production related to Mg-Zr alloys corrosion and water radiolysis process. In this context, metakaolin geo-polymers offer an interesting outlook: corrosion densities of Mg-Zr alloys are significantly lower than in Portland cement. This work firstly presents the hydrogen production of Mg-Zr alloy embedded in geo-polymers prepared from different the activation solution (NaOH or KOH). The effect of addition of fluorine on the magnesium corrosion in geo-polymer has been investigated too. The results point out that sodium geo-polymer is a suitable binder for Mg-Zr alloy encapsulation with respect to magnesium corrosion resistance. Furthermore the presence of fluorine reduces significantly the hydrogen release. Then, the impact of fluorine on the geo-polymer network formation was studied by rheological, calorimetric and 19 F NMR measurements. No direct effect resulting from the addition of fluorine has been shown on the geo-polymer binder. Secondly, the formulation of the encapsulation matrix has been adjusted to fulfil the expected physical and mechanical properties. Observations, dimensional evolutions and compressive strengths demonstrated that addition of sand to the geo-polymer binder is efficient to meet the storage criteria. Consequently, a matrix formulation compatible with Mg-Zr alloy encapsulation has been proposed. Finally, irradiation tests have been carried out to assess the hydrogen radiolytic yield of the matrix under exposure to γ radiation. (authors)

GEO Optical Data Association with Concurrent Metric and Photometric Information

Science.gov (United States)

Dao, P.; Monet, D.

Data association in a congested area of the GEO belt with occasional visits by non-resident objects can be treated as a Multi-Target-Tracking (MTT) problem. For a stationary sensor surveilling the GEO belt, geosynchronous and near GEO objects are not completely motionless in the earth-fixed frame and can be observed as moving targets. In some clusters, metric or positional information is insufficiently accurate or up-to-date to associate the measurements. In the presence of measurements with uncertain origin, star tracks (residuals) and other sensor artifacts, heuristic techniques based on hard decision assignment do not perform adequately. In the MMT community, Bar-Shalom [2009 Bar-Shalom] was first in introducing the use of measurements to update the state of the target of interest in the tracking filter, e.g. Kalman filter. Following Bar-Shalom’s idea, we use the Probabilistic Data Association Filter (PDAF) but to make use of all information obtainable in the measurement of three-axis-stabilized GEO satellites, we combine photometric with metric measurements to update the filter. Therefore, our technique Concurrent Spatio- Temporal and Brightness (COSTB) has the stand-alone ability of associating a track with its identity –for resident objects. That is possible because the light curve of a stabilized GEO satellite changes minimally from night to night. We exercised COSTB on camera cadence data to associate measurements, correct mistags and detect non-residents in a simulated near real time cadence. Data on GEO clusters were used.

GeoCrystal: graphic-interactive access to geodata archives

Science.gov (United States)

Goebel, Stefan; Haist, Joerg; Jasnoch, Uwe

2002-03-01

Recently there is spent a lot of effort to establish information systems and global infrastructures enabling both data suppliers and users to describe (-> eCommerce, metadata) as well as to find appropriate data. Examples for this are metadata information systems, online-shops or portals for geodata. The main disadvantages of existing approaches are insufficient methods and mechanisms leading users to (e.g. spatial) data archives. This affects aspects concerning usability and personalization in general as well as visual feedback techniques in the different steps of the information retrieval process. Several approaches aim at the improvement of graphical user interfaces by using intuitive metaphors, but only some of them offer 3D interfaces in the form of information landscapes or geographic result scenes in the context of information systems for geodata. This paper presents GeoCrystal, which basic idea is to adopt Venn diagrams to compose complex queries and to visualize search results in a 3D information and navigation space for geodata. These concepts are enhanced with spatial metaphors and 3D information landscapes (library for geodata) wherein users can specify searches for appropriate geodata and are enabled to graphic-interactively communicate with search results (book metaphor).

Defining and detecting malaria epidemics in south-east Iran

Directory of Open Access Journals (Sweden)

McKelvie William R

2012-03-01

Full Text Available Abstract Background A lack of consensus on how to define malaria epidemics has impeded the evaluation of early detection systems. This study aimed to develop local definitions of malaria epidemics in a known malarious area of Iran, and to use that definition to evaluate the validity of several epidemic alert thresholds. Methods Epidemic definition variables generated from surveillance data were plotted against weekly malaria counts to assess which most accurately labelled aberrations. Various alert thresholds were then generated from weekly counts or log counts. Finally, the best epidemic definition was used to calculate and compare sensitivities, specificities, detection delays, and areas under ROC curves of the alert thresholds. Results The best epidemic definition used a minimum duration of four weeks and week-specific and overall smoothed geometric means plus 1.0 standard deviation. It defined 13 epidemics. A modified C-SUM alert of untransformed weekly counts using a threshold of mean + 0.25 SD had the highest combined sensitivity and specificity. Untransformed C-SUM alerts also had the highest area under the ROC curve. Conclusions Defining local malaria epidemics using objective criteria facilitated the evaluation of alert thresholds. This approach needs further study to refine epidemic definitions and prospectively evaluate epidemic alerts.

Configuring the autism epidemic

DEFF Research Database (Denmark)

Seeberg, Jens; Christensen, Fie Lund Lindegaard

2017-01-01

Autism has been described as an epidemic, but this claim is contested and may point to an awareness epidemic, i.e. changes in the definition of what autism is and more attention being invested in diagnosis leading to a rise in registered cases. The sex ratio of children diagnosed with autism...... is skewed in favour of boys, and girls with autism tend to be diagnosed much later than boys. Building and further developing the notion of ‘configuration’ of epidemics, this article explores the configuration of autism in Denmark, with a particular focus on the health system and social support to families...... with children diagnosed with autism, seen from a parental perspective. The article points to diagnostic dynamics that contribute to explaining why girls with autism are not diagnosed as easily as boys. We unfold these dynamics through the analysis of a case of a Danish family with autism....

Specification of electron radiation environment at GEO and MEO for surface charging estimates

Science.gov (United States)

Ganushkina, N.; Dubyagin, S.; Mateo Velez, J. C.; Liemohn, M. W.

2017-12-01

A series of anomalies at GEO have been attributed to electrons of energy below 100 keV, responsible for surface charging. The process at play is charge deposition on covering insulating surfaces and is directly linked to the space environment at a time scale of a few tens of seconds. Even though modern satellites benefited from the analysis of past flight anomalies and losses, it appears that surface charging remains a source of problems. Accurate specification of the space environment at different orbits is of a key importance. We present the operational model for low energy (model (IMPTAM). This model has been operating online since March 2013 (http://fp7-spacecast.eu and imptam.fmi.fi) and it is driven by the real time solar wind and IMF parameters and by the real time Dst index. The presented model provides the low energy electron flux at all L-shells and at all satellite orbits, when necessary. IMPTAM is used to simulate the fluxes of low energy electrons inside the Earth's magnetosphere at the time of severe events measured on LANL satellites at GEO. There is no easy way to say what will be the flux of keV electrons at MEO when surface charging events are detected at GEO than to use a model. The maximal electron fluxes obtained at MEO (L = 4.6) within a few tens of minutes hours following the LANL events at GEO have been extracted to feed a database of theoretical/numerical worst-case environments for surface charging at MEO. All IMPTAM results are instantaneous, data have not been average. In order to validate the IMPTAM output at MEO, we conduct the statistical analysis of measured electron fluxes onboard Van Allen Probes (ECT HOPE (20 eV-45 keV) and ECT MagEIS (30 - 300 keV) at distances of 4.6 Re. IMPTAM e- flux at MEO is used as input to SPIS, the Spacecraft Plasma Interaction System Software toolkit for spacecraft-plasma interactions and spacecraft charging modelling (http://dev.spis.org/projects/spine/home/spis). The research leading to these results

Unsynchronized influenza epidemics in two neighboring subtropical cities

Directory of Open Access Journals (Sweden)

Xiujuan Tang

2018-04-01

Full Text Available Objective: The aim of this study was to examine the synchrony of influenza epidemics between Hong Kong and Shenzhen, two neighboring subtropical cities in South China. Methods: Laboratory-confirmed influenza data for the period January 2006 to December 2016 were obtained from the Shenzhen Center for Disease Control and Prevention and the Department of Health in Hong Kong. The population data were retrieved from the 2011 population censuses. The weekly rates of laboratory-confirmed influenza cases were compared between Shenzhen and Hong Kong. Results: Unsynchronized influenza epidemics between Hong Kong and Shenzhen were frequently observed during the study period. Influenza A/H1N1 caused a more severe pandemic in Hong Kong in 2009, but the subsequent seasonal epidemics showed similar magnitudes in both cities. Two influenza A/H3N2 dominant epidemic waves were seen in Hong Kong in 2015, but these epidemics were very minor in Shenzhen. More influenza B epidemics occurred in Shenzhen than in Hong Kong. Conclusions: Influenza epidemics appeared to be unsynchronized between Hong Kong and Shenzhen most of the time. Given the close geographical locations of these two cities, this could be due to the strikingly different age structures of their populations. Keywords: Influenza epidemics, Synchrony, Shenzhen, Hong Kong

Networked SIS Epidemics With Awareness

KAUST Repository

Paarporn, Keith

2017-07-20

We study a susceptible-infected-susceptible epidemic process over a static contact network where the nodes have partial information about the epidemic state. They react by limiting their interactions with their neighbors when they believe the epidemic is currently prevalent. A node\\'s awareness is weighted by the fraction of infected neighbors in their social network, and a global broadcast of the fraction of infected nodes in the entire network. The dynamics of the benchmark (no awareness) and awareness models are described by discrete-time Markov chains, from which mean-field approximations (MFAs) are derived. The states of the MFA are interpreted as the nodes\\' probabilities of being infected. We show a sufficient condition for the existence of a

Epidemic dynamics and endemic states in complex networks

Science.gov (United States)

Pastor-Satorras, Romualdo; Vespignani, Alessandro

2001-06-01

We study by analytical methods and large scale simulations a dynamical model for the spreading of epidemics in complex networks. In networks with exponentially bounded connectivity we recover the usual epidemic behavior with a threshold defining a critical point below that the infection prevalence is null. On the contrary, on a wide range of scale-free networks we observe the absence of an epidemic threshold and its associated critical behavior. This implies that scale-free networks are prone to the spreading and the persistence of infections whatever spreading rate the epidemic agents might possess. These results can help understanding computer virus epidemics and other spreading phenomena on communication and social networks.

Epidemic dynamics and endemic states in complex networks

International Nuclear Information System (INIS)

Pastor-Satorras, Romualdo; Vespignani, Alessandro

2001-01-01

We study by analytical methods and large scale simulations a dynamical model for the spreading of epidemics in complex networks. In networks with exponentially bounded connectivity we recover the usual epidemic behavior with a threshold defining a critical point below that the infection prevalence is null. On the contrary, on a wide range of scale-free networks we observe the absence of an epidemic threshold and its associated critical behavior. This implies that scale-free networks are prone to the spreading and the persistence of infections whatever spreading rate the epidemic agents might possess. These results can help understanding computer virus epidemics and other spreading phenomena on communication and social networks

An epidemic model of rumor diffusion in online social networks

Science.gov (United States)

Cheng, Jun-Jun; Liu, Yun; Shen, Bo; Yuan, Wei-Guo

2013-01-01

So far, in some standard rumor spreading models, the transition probability from ignorants to spreaders is always treated as a constant. However, from a practical perspective, the case that individual whether or not be infected by the neighbor spreader greatly depends on the trustiness of ties between them. In order to solve this problem, we introduce a stochastic epidemic model of the rumor diffusion, in which the infectious probability is defined as a function of the strength of ties. Moreover, we investigate numerically the behavior of the model on a real scale-free social site with the exponent γ = 2.2. We verify that the strength of ties plays a critical role in the rumor diffusion process. Specially, selecting weak ties preferentially cannot make rumor spread faster and wider, but the efficiency of diffusion will be greatly affected after removing them. Another significant finding is that the maximum number of spreaders max( S) is very sensitive to the immune probability μ and the decay probability v. We show that a smaller μ or v leads to a larger spreading of the rumor, and their relationships can be described as the function ln(max( S)) = Av + B, in which the intercept B and the slope A can be fitted perfectly as power-law functions of μ. Our findings may offer some useful insights, helping guide the application in practice and reduce the damage brought by the rumor.

GeoCEGAS: natural gas distribution management system

Energy Technology Data Exchange (ETDEWEB)

Ribeiro, Lorena C.J. [Companhia de Gas do Ceara (CEGAS), Fortaleza, CE (Brazil); Targa, Fernando O. [Gestao Empresarial e Informatica Ltda. (GEMPI), Sao Paulo, SP (Brazil)

2009-07-01

This Technical Paper approach the conception, architecture, design, construction, and implementation of GeoCEGAS, a spatially enabled corporate management information system, oriented to store and provide Web access, to information associated with the natural gas distribution network, owned by CEGAS. This paper reports business processes, business entities and business intelligence approached on the project, as well as an overview of system architecture, applications, and technology used on the implementation of GeoCEGAS. Finally, is presented an introduction to the work methodology used, as well a synopsis of benefits achievements. (author)

“Less of the Heroine than the Woman”: Parsing Gender in the British Novel

Directory of Open Access Journals (Sweden)

Susan Carlile

2017-06-01

Full Text Available This essay offers two methods that will help students resist the temptation to judge eighteenth-century novels by twenty-first-century standards. These methods prompt students to parse the question of whether female protagonists in novels—in this case, Daniel Defoe’s Roxana (1724, Samuel Johnson’s Rasselas (1759, and Charlotte Lennox’s Sophia (1762—are portrayed as perfect models or as complex humans. The first method asks them to engage with definitions of the term “heroine,” and the second method uses word clouds to extend their thinking about the complexity of embodying a mid-eighteenth-century female identity.

Discovery of accessible locations using region-based geo-social data

KAUST Repository

Wang, Yan; Li, Jianmin; Zhong, Ying; Zhu, Shunzhi; Guo, Danhuai; Shang, Shuo

2018-01-01

Geo-social data plays a significant role in location discovery and recommendation. In this light, we propose and study a novel problem of discovering accessible locations in spatial networks using region-based geo-social data. Given a set Q of query

ExoGeoLab Pilot Project for Landers, Rovers and Instruments

Science.gov (United States)

Foing, Bernard

2010-05-01

We have developed a pilot facility with a Robotic Test Bench (ExoGeoLab) and a Mobile Lab Habitat (ExoHab). They can be used to validate concepts and external instruments from partner institutes. The ExoGeoLab research incubator project, has started in the frame of a collaboration between ILEWG (International Lunar Exploration working Group http://sci.esa.int/ilewg), ESTEC, NASA and academic partners, supported by a design and control desk in the European Space Incubator (ESI), as well as infrastructure. ExoGeoLab includes a sequence of technology and research pilot project activities: - Data analysis and interpretation of remote sensing and in-situ data, and merging of multi-scale data sets - Procurement and integration of geophysical, geo-chemical and astrobiological breadboard instruments on a surface station and rovers - Integration of cameras, environment and solar sensors, Visible and near IR spectrometer, Raman spectrometer, sample handling, cooperative rovers - Delivery of a generic small planetary lander demonstrator (ExoGeoLab lander, Sept 2009) as a platform for multi-instruments tests - Research operations and exploitation of ExoGeoLab test bench for various conceptual configurations, and support for definition and design of science surface packages (Moon, Mars, NEOs, outer moons) - Field tests of lander, rovers and instruments in analogue sites (Utah MDRS 2009 & 2010, Eifel volcanic park in Sept 2009, and future campaigns). Co-authors, ILEWG ExoGeoLab & ExoHab Team: B.H. Foing(1,11)*#, C. Stoker(2,11)*, P. Ehrenfreund(10,11), L. Boche-Sauvan(1,11)*, L. Wendt(8)*, C. Gross(8, 11)*, C. Thiel(9)*, S. Peters(1,6)*, A. Borst(1,6)*, J. Zavaleta(2)*, P. Sarrazin(2)*, D. Blake(2), J. Page(1,4,11), V. Pletser(5,11)*, E. Monaghan(1)*, P. Mahapatra(1)#, A. Noroozi(3), P. Giannopoulos(1,11) , A. Calzada(1,6,11), R. Walker(7), T. Zegers(1, 15) #, G. Groemer(12)# , W. Stumptner(12)#, B. Foing(2,5), J. K. Blom(3)#, A. Perrin(14)#, M. Mikolajczak(14)#, S. Chevrier(14

A distributed charge storage with GeO2 nanodots

International Nuclear Information System (INIS)

Chang, T.C.; Yan, S.T.; Hsu, C.H.; Tang, M.T.; Lee, J.F.; Tai, Y.H.; Liu, P.T.; Sze, S.M.

2004-01-01

In this study, a distributed charge storage with GeO 2 nanodots is demonstrated. The mean size and aerial density of the nanodots embedded in SiO 2 are estimated to be about 5.5 nm and 4.3x10 11 cm -2 , respectively. The composition of the dots is also confirmed to be GeO 2 by x-ray absorption near-edge structure analyses. A significant memory effect is observed through the electrical measurements. Under the low voltage operation of 5 V, the memory window is estimated to ∼0.45 V. Also, a physical model is proposed to demonstrate the charge storage effect through the interfacial traps of GeO 2 nanodots

Study on geo-information modelling

Czech Academy of Sciences Publication Activity Database

Klimešová, Dana

2006-01-01

Roč. 5, č. 5 (2006), s. 1108-1113 ISSN 1109-2777 Institutional research plan: CEZ:AV0Z10750506 Keywords : control GIS * geo-information modelling * uncertainty * spatial temporal approach Web Services Subject RIV: BC - Control Systems Theory

Probe into geo-information science and information science in nuclear and geography science in China

International Nuclear Information System (INIS)

Tang Bin

2001-01-01

In the past ten years a new science-Geo-Information Science, a branch of Geoscience, developed very fast, which has been valued and paid much attention to. Based on information science, the author analyzes the flow of material, energy, people and information and their relations, presents the place of Geo-Information Science in Geo-science and its content from Geo-Informatics, Geo-Information technology and the application of itself. Finally, the author discusses the main content and problem existed in Geo-Information Science involved in Nuclear and Geography Science

Phylodynamic analysis of HIV sub-epidemics in Mochudi, Botswana

Directory of Open Access Journals (Sweden)

Vlad Novitsky

2015-12-01

Real-time HIV genotyping and breaking down local HIV epidemics into phylogenetically distinct sub-epidemics may help to reveal the structure and dynamics of HIV transmission networks in communities, and aid in the design of targeted interventions for members of the acute sub-epidemics that likely fuel local HIV/AIDS epidemics.

The standard-based open workflow system in GeoBrain (Invited)

Science.gov (United States)

Di, L.; Yu, G.; Zhao, P.; Deng, M.

2013-12-01

GeoBrain is an Earth science Web-service system developed and operated by the Center for Spatial Information Science and Systems, George Mason University. In GeoBrain, a standard-based open workflow system has been implemented to accommodate the automated processing of geospatial data through a set of complex geo-processing functions for advanced production generation. The GeoBrain models the complex geoprocessing at two levels, the conceptual and concrete. At the conceptual level, the workflows exist in the form of data and service types defined by ontologies. The workflows at conceptual level are called geo-processing models and cataloged in GeoBrain as virtual product types. A conceptual workflow is instantiated into a concrete, executable workflow when a user requests a product that matches a virtual product type. Both conceptual and concrete workflows are encoded in Business Process Execution Language (BPEL). A BPEL workflow engine, called BPELPower, has been implemented to execute the workflow for the product generation. A provenance capturing service has been implemented to generate the ISO 19115-compliant complete product provenance metadata before and after the workflow execution. The generation of provenance metadata before the workflow execution allows users to examine the usability of the final product before the lengthy and expensive execution takes place. The three modes of workflow executions defined in the ISO 19119, transparent, translucent, and opaque, are available in GeoBrain. A geoprocessing modeling portal has been developed to allow domain experts to develop geoprocessing models at the type level with the support of both data and service/processing ontologies. The geoprocessing models capture the knowledge of the domain experts and are become the operational offering of the products after a proper peer review of models is conducted. An automated workflow composition has been experimented successfully based on ontologies and artificial

Global Remote Sensing Data Subdivision Organization Based on GeoSOT%全球遥感数据剖分组织的 GeoSOT 网格应用

Institute of Scientific and Technical Information of China (English)

2014-01-01

At present, there are various data grids to organize data in different department data centers.In order to seek a remote sensing image data organization grid,which is compatible with the existing survey-ing and mapping data,a scheme of remote sensing data organization based on GeoSOT,geographical coordinate subdividing grid with one dimension integer coding on 2 n-tree,is proposed.it theoretically proves that GeoSOT has good isomorphism with National Topographic Map and other grids, such as Worldwind, Google Earth, Google Maps, Bing Maps and Mapworld, which makes GeoSOT gridinherit easily traditional surveying and mapping data and organize global remote sensing data.Under the premise of keeping the existing data organization,a virtual one global grid for global remote sensingdata organ-ization based on GeoSOT and a method of fast generating specification data products by GeoSOT cells aggregation are introduced.The test shows that it is very significantly to prove data integration efficiency with the virtual one global grid for global remote sensingdata organization based on GeoSOT.%针对目前不同部门按自身行业特点采用不同数据组织网格的问题，为寻求更适合于现有测绘数据组织体系兼容的遥感数据组织网格，提出基于GeoSOT网格的遥感数据组织方案，理论证明了Geo-SOT网格与国家地形图图幅和Worldwind、GoogleEarth、GoogleMaps、BingMaps、天地图等网格具有很好的同构性，有利于对传统测绘数据的继承。同时，在不改变现有数据组织体系的前提下，提出基于GeoSOT全球遥感数据“虚拟一张网”的数据组织模型和数据整合方法。通过试验证明，基于GeoSOT遥感影像“虚拟一张网”的数据组织可有效提高遥感数据整合效率。

GeoMod 2014 - Modelling in geoscience

Science.gov (United States)

Leever, Karen; Oncken, Onno

2016-08-01

GeoMod is a biennial conference to review and discuss latest developments in analogue and numerical modelling of lithospheric and mantle deformation. GeoMod2014 took place at the GFZ German Research Centre for Geosciences in Potsdam, Germany. Its focus was on rheology and deformation at a wide range of temporal and spatial scales: from earthquakes to long-term deformation, from micro-structures to orogens and subduction systems. It also addressed volcanotectonics and the interaction between tectonics and surface processes (Elger et al., 2014). The conference was followed by a 2-day short course on "Constitutive Laws: from Observation to Implementation in Models" and a 1-day hands-on tutorial on the ASPECT numerical modelling software.

Parametric instability in GEO 600 interferometer

International Nuclear Information System (INIS)

Gurkovsky, A.G.; Vyatchanin, S.P.

2007-01-01

We present analysis of undesirable effect of parametric instability in signal recycled GEO 600 interferometer. The basis for this effect is provided by excitation of additional (Stokes) optical mode, having frequency ω 1 , and mirror elastic mode, having frequency ω m , when the optical energy stored in the main FP cavity mode, having frequency ω 0 , exceeds a certain threshold and detuning Δ=ω 0 -ω 1 -ω m is small. We discuss the potential of observing parametric instability and its precursors in GEO 600 interferometer. This approach provides the best option to get familiar with this phenomenon, to develop experimental methods to depress it and to test the effectiveness of these methods in situ

[Observations on the 1348 plague epidemic. Measures taken to combat its tragic effects and avoid epidemic recrudescence].

Science.gov (United States)

Sabbatani, Sergio

2003-03-01

When the "Black Death" swept through Europe from southern France in 1348, in the short space of two years the Europeans were hit by one of the most serious epidemics ever recorded in human history. Yersinia pestis reached Europe by sea, its contamination propagated by the Genoese ships coming from the Crimean port of Jaffa. For the first time the world experienced microbiological unification: East and West were equally involved in the tragedy that spread, and no town remained unscathed during the various epidemic waves which succeeded one another in the following three centuries. The authors of this article describe how and why the epidemic spread, as well as the factors that led to the swift, and often fatal, involment of millions of Europeans. The second part of the article deals with the measures taken by the healthcare authorities of European towns and countries in order to halt the proliferation of the disease. According to the data and observations by authoritative authors, selected among the many who studied the disease that from the 14th century spread like a scourge throughout the known world at the time, the epidemic could have been even more serious, in terms of mortality and morbidity, without the disciplinary and provisional health measures taken. The experience gained in Italy and all over Europe at the time proved useful not only to better manage the epidemics which cyclically broke out, but also to efficiently combat the cholera epidemics of the 19th century. With the 14th century plague epidemic, the Europeans and their political and administrative representatives may well have realized for the very first time that contamination could be combatted by adopting a set of rational, scientific norms - although in practice such rules were mostly inspired by misguided scientific theories. Humankind was no longer alone. A new society was emerging, one that was not going to passively accept the more or less mysterious ways of a superior being of fate. The

Pseudocode Interpreter (Pseudocode Integrated Development Environment with Lexical Analyzer and Syntax Analyzer using Recursive Descent Parsing Algorithm

Directory of Open Access Journals (Sweden)

Christian Lester D. Gimeno

2017-11-01

Full Text Available –This research study focused on the development of a software that helps students design, write, validate and run their pseudocode in a semi Integrated Development Environment (IDE instead of manually writing it on a piece of paper.Specifically, the study aimed to develop lexical analyzer or lexer, syntax analyzer or parser using recursive descent parsing algorithm and an interpreter. The lexical analyzer reads pseudocodesource in a sequence of symbols or characters as lexemes.The lexemes are then analyzed by the lexer that matches a pattern for valid tokens and passes to the syntax analyzer or parser. The syntax analyzer or parser takes those valid tokens and builds meaningful commands using recursive descent parsing algorithm in a form of an abstract syntax tree. The generation of an abstract syntax tree is based on the specified grammar rule created by the researcher expressed in Extended Backus-Naur Form. The Interpreter takes the generated abstract syntax tree and starts the evaluation or interpretation to produce pseudocode output. The software was evaluated using white-box testing by several ICT professionals and black-box testing by several computer science students based on the International Organization for Standardization (ISO 9126 software quality standards. The overall results of the evaluation both for white-box and black-box were described as “Excellent in terms of functionality, reliability, usability, efficiency, maintainability and portability”.

Multilingual event extraction for epidemic detection.

Science.gov (United States)

Lejeune, Gaël; Brixtel, Romain; Doucet, Antoine; Lucas, Nadine

2015-10-01

This paper presents a multilingual news surveillance system applied to tele-epidemiology. It has been shown that multilingual approaches improve timeliness in detection of epidemic events across the globe, eliminating the wait for local news to be translated into major languages. We present here a system to extract epidemic events in potentially any language, provided a Wikipedia seed for common disease names exists. The Daniel system presented herein relies on properties that are common to news writing (the journalistic genre), the most useful being repetition and saliency. Wikipedia is used to screen common disease names to be matched with repeated characters strings. Language variations, such as declensions, are handled by processing text at the character-level, rather than at the word level. This additionally makes it possible to handle various writing systems in a similar fashion. As no multilingual ground truth existed to evaluate the Daniel system, we built a multilingual corpus from the Web, and collected annotations from native speakers of Chinese, English, Greek, Polish and Russian, with no connection or interest in the Daniel system. This data set is available online freely, and can be used for the evaluation of other event extraction systems. Experiments for 5 languages out of 17 tested are detailed in this paper: Chinese, English, Greek, Polish and Russian. The Daniel system achieves an average F-measure of 82% in these 5 languages. It reaches 87% on BEcorpus, the state-of-the-art corpus in English, slightly below top-performing systems, which are tailored with numerous language-specific resources. The consistent performance of Daniel on multiple languages is an important contribution to the reactivity and the coverage of epidemiological event detection systems. Most event extraction systems rely on extensive resources that are language-specific. While their sophistication induces excellent results (over 90% precision and recall), it restricts their

The Characteristics of TB Epidemic and TB/HIV Co-Infection Epidemic: A 2007-2013 Retrospective Study in Urumqi, Xinjiang Province, China.

Directory of Open Access Journals (Sweden)

Wang Wei

Full Text Available This study was aimed to find out epidemiologic characteristic of tuberculosis (TB cases, and Human Immunodeficiency Virus (HIV positive cases among TB patients (TB/HIV co-infection through demographic, temporal, and spatial study in Urumqi.Descriptive statistics and multivariate logistic regression were applied to identify the epidemiologic characteristics and risk factors of TB epidemic and TB/HIV co-infection epidemic. All addresses of each TB case, TB/HIV co-infection case, and administrative street were transformed into geographical coordinate. Subsequently, the geocoded address for 82 streets was transformed into a dot map used as the basis of spatial datasets. In addition, the paper also used quantile map and the spatial scan statistic in order to identify the spatial distribution and spatial clusters of TB epidemic and TB/HIV co-infection epidemic.There was a declining trend of the notification rates of TB epidemic from 2007 to 2009, as well as a rising trend from 2010 to 2013. However, the notification rates of TB/HIV co-infection epidemic showed a rising trend from 2007 to 2010, and a declining trend from 2011 to 2013. Moreover, a significant share of TB epidemic and TB/HIV co-infection epidemic happened between the age of 15 to 45 years old, indicating an increase in risk of TB and TB/HIV infection. It is worth noting that the risk of HIV infection for male TB patients was 2.947 times (95% CI [2.178, 3.988] than that of female patients. Han ethnicity and Uygur ethnicity in urban region accounted for a large proportion of total TB and TB/HIV co-infection cases. Most of the TB cases of minorities in Urumqi showed a statistically significant increase in risk of HIV infection than Han ethnicity in Urumqi. In addition, the spatial distribution of TB epidemic and TB/HIV co-infection epidemic was highly skewed. Most of the local clusters were located in urban area and rural-urban continuum where showed an increase in risk of TB and TB

The German-Chinese research collaboration YANGTZE-GEO: Assessing the geo-risks in the Three Gorges Reservoir area

Science.gov (United States)

Schönbrodt, S.; Behrens, T.; Bieger, K.; Ehret, D.; Frei, M.; Hörmann, G.; Seeber, C.; Schleier, M.; Schmalz, B.; Fohrer, N.; Kaufmann, H.; King, L.; Rohn, J.; Subklew, G.; Xiang, W.

2012-04-01

The river impoundment by The Three Gorges Dam leads to resettlement and land reclamation on steep slopes. As a consequence, ecosystem changes such as soil erosion, mass movements, and diffuse sediment and matter fluxes are widely expected to increase rapidly. In order to assess and analyse those ecosystem changes, the German-Chinese joint research project YANGTZE-GEO was set up in 2008. Within the framework of YANGTZE-GEO five German universities (Tuebingen, Erlangen, Giessen, Kiel, Potsdam) conducted studies on soil erosion, mass movements, diffuse matter inputs, and land use change and vulnerability in close collaboration with Chinese scientists. The Chinese partners and institutions are according to their alphabetic order of hometown the Chinese Research Academy of Environmental Sciences (CRAES; Beijing), the Standing Office of the State Council Three Gorges Project Construction Committee (Beijing), the National Climate Centre (NCC) of the China Meteorological Administration (CMA; Beijing), the Aero Geophysical Survey and Remote Sensing for Land and Resources (AES; Beijing), the Nanjing University, the CAS Institute of Soil Science (Nanjing), the Nanjing Institute of Geography and Limnology at CAS (NIGLAS; Nanjing), the China University of Geosciences (CUG; Wuhan), the CAS Institute of Hydrobiology (Wuhan), and the China Three Gorges University (Yichang). The overall aim of YANGTZE-GEO is the development of a risk assessment and forecasting system to locate high risk areas using GIS-based erosion modelling, data mining tools for terrace condition analysis and landslide recognition, eco-hydrological modelling for diffuse matter inputs, and state-of-the-art remote sensing to assess the landscape's vulnerability. Furthermore, the project aims at the recommendation of sustainable land management systems. YANGTZE-GEO showed the relevance of such research and crucially contributes to the understanding of the dimension and dynamics of the ecological consequences of

Understanding Ebola: the 2014 epidemic.

Science.gov (United States)

Kaner, Jolie; Schaack, Sarah

2016-09-13

Near the end of 2013, an outbreak of Zaire ebolavirus (EBOV) began in Guinea, subsequently spreading to neighboring Liberia and Sierra Leone. As this epidemic grew, important public health questions emerged about how and why this outbreak was so different from previous episodes. This review provides a synthetic synopsis of the 2014-15 outbreak, with the aim of understanding its unprecedented spread. We present a summary of the history of previous epidemics, describe the structure and genetics of the ebolavirus, and review our current understanding of viral vectors and the latest treatment practices. We conclude with an analysis of the public health challenges epidemic responders faced and some of the lessons that could be applied to future outbreaks of Ebola or other viruses.

Pre-Service Mathematics Teachers' Views about GeoGebra and Its Use

Science.gov (United States)

Horzum, Tugba; Ünlü, Melihan

2017-01-01

The purpose of this study was to determine the views of pre-service Mathematics teachers' (PMTs) about GeoGebra and its use after being exposed to GeoGebra activities designing processes. This is a case study which was conducted with 36 PMTs. Three open-ended questions were used, after the completion of the 14-week process of GeoGebra training and…

Inferring epidemic contact structure from phylogenetic trees.

Directory of Open Access Journals (Sweden)

Gabriel E Leventhal

Full Text Available Contact structure is believed to have a large impact on epidemic spreading and consequently using networks to model such contact structure continues to gain interest in epidemiology. However, detailed knowledge of the exact contact structure underlying real epidemics is limited. Here we address the question whether the structure of the contact network leaves a detectable genetic fingerprint in the pathogen population. To this end we compare phylogenies generated by disease outbreaks in simulated populations with different types of contact networks. We find that the shape of these phylogenies strongly depends on contact structure. In particular, measures of tree imbalance allow us to quantify to what extent the contact structure underlying an epidemic deviates from a null model contact network and illustrate this in the case of random mixing. Using a phylogeny from the Swiss HIV epidemic, we show that this epidemic has a significantly more unbalanced tree than would be expected from random mixing.

Malaria epidemic and drug resistance, Djibouti.

Science.gov (United States)

Rogier, Christophe; Pradines, Bruno; Bogreau, H; Koeck, Jean-Louis; Kamil, Mohamed-Ali; Mercereau-Puijalon, Odile

2005-02-01

Analysis of Plasmodium falciparum isolates collected before, during, and after a 1999 malaria epidemic in Djibouti shows that, despite a high prevalence of resistance to chloroquine, the epidemic cannot be attributed to a sudden increase in drug resistance of local parasite populations.

GeoNetwork powered GI-cat: a geoportal hybrid solution

Science.gov (United States)

Baldini, Alessio; Boldrini, Enrico; Santoro, Mattia; Mazzetti, Paolo

2010-05-01

To the aim of setting up a Spatial Data Infrastructures (SDI) the creation of a system for the metadata management and discovery plays a fundamental role. An effective solution is the use of a geoportal (e.g. FAO/ESA geoportal), that has the important benefit of being accessible from a web browser. With this work we present a solution based integrating two of the available frameworks: GeoNetwork and GI-cat. GeoNetwork is an opensource software designed to improve accessibility of a wide variety of data together with the associated ancillary information (metadata), at different scale and from multidisciplinary sources; data are organized and documented in a standard and consistent way. GeoNetwork implements both the Portal and Catalog components of a Spatial Data Infrastructure (SDI) defined in the OGC Reference Architecture. It provides tools for managing and publishing metadata on spatial data and related services. GeoNetwork allows harvesting of various types of web data sources e.g. OGC Web Services (e.g. CSW, WCS, WMS). GI-cat is a distributed catalog based on a service-oriented framework of modular components and can be customized and tailored to support different deployment scenarios. It can federate a multiplicity of catalogs services, as well as inventory and access services in order to discover and access heterogeneous ESS resources. The federated resources are exposed by GI-cat through several standard catalog interfaces (e.g. OGC CSW AP ISO, OpenSearch, etc.) and by the GI-cat extended interface. Specific components implement mediation services for interfacing heterogeneous service providers, each of which exposes a specific standard specification; such components are called Accessors. These mediating components solve providers data modelmultiplicity by mapping them onto the GI-cat internal data model which implements the ISO 19115 Core profile. Accessors also implement the query protocol mapping; first they translate the query requests expressed

Epidemic spreading in time-varying community networks

Energy Technology Data Exchange (ETDEWEB)

Ren, Guangming, E-mail: wangxy@dlut.edu.cn, E-mail: ren-guang-ming@163.com [School of Electronic and Information, Guangdong Polytechnic Normal University, Guangzhou 510665 (China); Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024 (China); Wang, Xingyuan, E-mail: wangxy@dlut.edu.cn, E-mail: ren-guang-ming@163.com [Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024 (China)

2014-06-15

The spreading processes of many infectious diseases have comparable time scale as the network evolution. Here, we present a simple networks model with time-varying community structure, and investigate susceptible-infected-susceptible epidemic spreading processes in this model. By both theoretic analysis and numerical simulations, we show that the efficiency of epidemic spreading in this model depends intensively on the mobility rate q of the individuals among communities. We also find that there exists a mobility rate threshold q{sub c}. The epidemic will survive when q > q{sub c} and die when q < q{sub c}. These results can help understanding the impacts of human travel on the epidemic spreading in complex networks with community structure.

Epidemic spreading in time-varying community networks

International Nuclear Information System (INIS)

Ren, Guangming; Wang, Xingyuan

2014-01-01

The spreading processes of many infectious diseases have comparable time scale as the network evolution. Here, we present a simple networks model with time-varying community structure, and investigate susceptible-infected-susceptible epidemic spreading processes in this model. By both theoretic analysis and numerical simulations, we show that the efficiency of epidemic spreading in this model depends intensively on the mobility rate q of the individuals among communities. We also find that there exists a mobility rate threshold q c . The epidemic will survive when q > q c and die when q  c . These results can help understanding the impacts of human travel on the epidemic spreading in complex networks with community structure

FID GEO: Digital transformation and Open Access in Germany's geoscience research community

Science.gov (United States)

Hübner, Andreas; Martinson, Guntars; Bertelmann, Roland; Elger, Kirsten; Pfurr, Norbert; Schüler, Mechthild

2017-04-01

The 'Specialized Information Service for Solid Earth Sciences' (FID GEO) supports Germany's geoscience research community in 1) electronic publishing of i) institutional and "grey" literature not released in publishing houses and ii) pre- and postprints of research articles 2) digitising geoscience literature and maps and 3) addressing the publication of research data associated with peer-reviewed research articles (data supplements). Established in 2016, FID GEO is funded by the German Research Foundation (DFG) and is run by the Göttingen State and University Library (SUB Göttingen) and the GFZ German Research Centre for Geosciences. Here we present recent success stories and lessons learned. With regard to digitisation, FID GEO received a request from one of the most prestigious geoscience societies in Germany to digitise back-issues of its journals that are so far only available in print. Aims are to ensure long-term availability in Open Access and high visibility by DOI-referenced electronic publication via the FID GEO repository. While digitisation will be financed by FID GEO funds, major challenges are to identify the copyright holders (journals date back to 1924) and negotiate digitisation and publication rights. With respect to research data publishing, we present how we target scientists to integrate the publication of research data into their workflows and institutions to promote the topic. For the latter, we successfully take advantage of existing networks as entry points to the community, like the research network Geo.X in the Berlin-Brandenburg area, individual learned societies as well as their overarching structures DV Geo and GeoUnion. FID GEO promotes the Statement of Commitment of the Coalition for Publishing Data in the Earth and Space Sciences (COPDESS) as well as the FAIR Data Principles in presentations to the above-mentioned groups and institutions. Our aim is to eventually transfer the positive feedback from the geoscience community into

GeoSpark SQL: An Effective Framework Enabling Spatial Queries on Spark

Directory of Open Access Journals (Sweden)

Zhou Huang

2017-09-01

Full Text Available In the era of big data, Internet-based geospatial information services such as various LBS apps are deployed everywhere, followed by an increasing number of queries against the massive spatial data. As a result, the traditional relational spatial database (e.g., PostgreSQL with PostGIS and Oracle Spatial cannot adapt well to the needs of large-scale spatial query processing. Spark is an emerging outstanding distributed computing framework in the Hadoop ecosystem. This paper aims to address the increasingly large-scale spatial query-processing requirement in the era of big data, and proposes an effective framework GeoSpark SQL, which enables spatial queries on Spark. On the one hand, GeoSpark SQL provides a convenient SQL interface; on the other hand, GeoSpark SQL achieves both efficient storage management and high-performance parallel computing through integrating Hive and Spark. In this study, the following key issues are discussed and addressed: (1 storage management methods under the GeoSpark SQL framework, (2 the spatial operator implementation approach in the Spark environment, and (3 spatial query optimization methods under Spark. Experimental evaluation is also performed and the results show that GeoSpark SQL is able to achieve real-time query processing. It should be noted that Spark is not a panacea. It is observed that the traditional spatial database PostGIS/PostgreSQL performs better than GeoSpark SQL in some query scenarios, especially for the spatial queries with high selectivity, such as the point query and the window query. In general, GeoSpark SQL performs better when dealing with compute-intensive spatial queries such as the kNN query and the spatial join query.

The GEO-3 Scenarios 2002-2032. Quantification and Analysis of Environmental Impacts

International Nuclear Information System (INIS)

Bakkes, J.; Potting, J.; Kemp-Benedict, E.; Raskin, P.; Masui, T.; Rana, A.; Nellemann, C.; Rothman, D.

2004-01-01

The four contrasting visions of the world's next three decades as presented in the third Global Environment Outlook (GEO-3) have many implications for policy - from hunger to climate change and from freshwater issues to biodiversity. The four scenarios analysed are Markets First, Policy First, Security First, Sustainability First. Presenting a deeper analysis than the original GEO-3 report, this Technical Report quantifies the impacts of the scenarios for all 19 GEO 'sub-regions', such as Eastern Africa and Central Europe. Regional impacts are discussed in the context of sustainable development. The report summary compares the impacts of the four scenarios across regions - and for the world as a whole - in the light of internationally agreed targets including those in the Millennium Declaration where applicable. It provides an account of the analytical methods, key assumptions, models and other tools, along with the approaches used in the analyses. Based on the methods and results, the report looks back on the process of producing the forward-looking analysis for GEO-3. Were all analytical centres on the same track? Did the approach adopted for GEO-3 contribute to the overall GEO objective of strengthening global-regional involvement and linkages?

Geo-communication and web-based geospatial infrastructure

DEFF Research Database (Denmark)

Brodersen, Lars; Nielsen, Anders

2005-01-01

The introduction of web-services as index-portals based on geoinformation has changed the conditions for both content and form of geocommunication. A high number of players and interactions (as well as a very high number of all kinds of information and combinations of these) characterize web-services......, where maps are only a part of the whole. These new conditions demand new ways of modelling the processes leading to geo-communication. One new aspect is the fact that the service providers have become a part of the geo-communication process with influence on the content. Another aspect...

Geo-communication and information design

DEFF Research Database (Denmark)

Brodersen, Lars

2009-01-01

of processes, procedures, factors, relations etc., all forming parts of a theory on geo-communication and information design. How do we decide whether to transmit content A or content B to another person? We make a decision. Making decisions does not normally give rise to difficulties, although a great deal......This article is an abstract of the book 'Geo-communication and information design'. The work involved in the book was inspired by the author's sense of wonder that there were apparently no existing theories, models etc. capable of identifying and choosing the content of information in systematic...... of debate might occur during the decision-making process. But if the question is extended to include a demand for systematics and consciousness (control) in the procedure adopted, the whole issue becomes more complex. How do we decide to transmit content A or content B to another person on a systematic...

Can epidemics be non-communicable?

DEFF Research Database (Denmark)

Seeberg, Jens; Meinert, Lotte

2015-01-01

This article argues that the concept of communicability that is central to the distinction between communicable diseases (CDs) and noncommunicable diseases (NCDs) is poorly conceptualized. The epidemic spread of NCDs such as diabetes, depression, and eating disorders demonstrates...... that they are communicable, even if they are not infectious. We need to more critically explore how they might be communicable in specific environments. All diseases with epidemic potential, we argue, should be assumed to be commun icable in a broader sense, and that the underlying medical distinction between infectious...... and noninfectious diseases confuses our understanding of NCD epidemics when these categories are treated as synonymous with ‘communicable’ and ‘noncommunicable’ diseases, respectively. The dominant role accorded to the concept of ‘lifestyle’, with its focus on individual responsibility, is part of the problem...

Epidemics in interconnected small-world networks

NARCIS (Netherlands)

Liu, M.; Li, D.; Qin, P.; Liu, C.; Wang, H.; Wang, F.

2015-01-01

Networks can be used to describe the interconnections among individuals, which play an important role in the spread of disease. Although the small-world effect has been found to have a significant impact on epidemics in single networks, the small-world effect on epidemics in interconnected networks

GeoXp : An R Package for Exploratory Spatial Data Analysis

Directory of Open Access Journals (Sweden)

Thibault Laurent

2012-04-01

Full Text Available We present GeoXp, an R package implementing interactive graphics for exploratory spatial data analysis. We use a data set concerning public schools of the French MidiPyrenees region to illustrate the use of these exploratory techniques based on the coupling between a statistical graph and a map. Besides elementary plots like boxplots,histograms or simple scatterplots, GeoXp also couples maps with Moran scatterplots, variogram clouds, Lorenz curves and other graphical tools. In order to make the most of the multidimensionality of the data, GeoXp includes dimension reduction techniques such as principal components analysis and cluster analysis whose results are also linked to the map.

Why new tools were developed for the 'GeoPortalNetwork : Liberty United" project

NARCIS (Netherlands)

Vanmeulebrouk, B.; Van Swol, R.; Kuyper, M.; Bulens, J.; Zevenbergen, J.A.

2009-01-01

As part of the national innovation co-funding scheme “Space for Geo-information” the project “GeoPortal Network: Liberty United” ran from late 2005 till the end of 2008. Purpose of the project was to promote access to geo-spatial information via web services. To achieve this goal, a network of

Epidemic model for information diffusion in web forums: experiments in marketing exchange and political dialog.

Science.gov (United States)

Woo, Jiyoung; Chen, Hsinchun

2016-01-01

As social media has become more prevalent, its influence on business, politics, and society has become significant. Due to easy access and interaction between large numbers of users, information diffuses in an epidemic style on the web. Understanding the mechanisms of information diffusion through these new publication methods is important for political and marketing purposes. Among social media, web forums, where people in online communities disseminate and receive information, provide a good environment for examining information diffusion. In this paper, we model topic diffusion in web forums using the epidemiology model, the susceptible-infected-recovered (SIR) model, frequently used in previous research to analyze both disease outbreaks and knowledge diffusion. The model was evaluated on a large longitudinal dataset from the web forum of a major retail company and from a general political discussion forum. The fitting results showed that the SIR model is a plausible model to describe the diffusion process of a topic. This research shows that epidemic models can expand their application areas to topic discussion on the web, particularly social media such as web forums.

Synthesis of organic liquids/geo-polymer composites for the immobilization of nuclear wastes

International Nuclear Information System (INIS)

Cantarel, Vincent

2016-01-01

This work is included in the management of radioactive organic liquids research field. The process is based on an emulsification of organic liquid in an alkali silicate solution allowing the synthesis of a geo-polymer matrix. The first part of this work consists in carrying out a screening on different organic liquids. A model system representative of the various oils and a geo-polymer reference formulation are then defined. The second part deals with the structuration of the organic liquid/geo-polymer structuration, from the mixture of the reactants to the final material. It aims at determining the phenomena allowing the synthesis of a homogeneous composite. The last two parts aim at characterizing the composite by studying its structure (chemical structure, porosity of the geo-polymer and dispersion of the oil) and its properties with respect to the application to the immobilization of radioactive waste. Unlike calcium silicate-based cementitious matrices, the structure of the geo-polymer is not affected by the chemical nature of the organic liquids. Only acid oils inhibit or slow down the geo-polymerization reaction. In order to obtain a homogeneous material, the presence of surfactant molecules is necessary. The emulsion stabilization mechanism at the base of the process is relying on a synergy between the surfactant molecules and the aluminosilicate particles present in the geo-polymer paste. The kinetics (chemical and mechanical) of the geo-polymerization are not impacted by the presence of oil or surfactants. Only an increase in the viscoelastic moduli and the elastic character of the pastes can be observed. This difference in rheological behavior is mainly due to the presence of surfactant. The structure of the matrix is identical to that of a pure geo-polymer of the same formulation. The organic liquid is dispersed in spherical inclusions whose radius is between 5 and 15 μm. These droplets are separated from each other, and from the environment by the

Disease spreading with epidemic alert on small-world networks

International Nuclear Information System (INIS)

Han, Xiao-Pu

2007-01-01

Base on two-dimension small-world networks, a susceptible-infected model with epidemic alert is proposed in this Letter. In this model, if some parts of the network are alarmed as dangerous, a fraction of edges between the alarmed parts and others will be removed, and two cases of alerting rules that the degree and frequency of contacts kept unchanged are considered respectively. The numerical simulations show that the spreading velocity is reduced by the accurate and timely epidemic alert, and the more accurate and timely, the stronger the deceleration effect. This model indicates that to broadcast epidemic alert timely is helpful and necessary in the control of epidemic spreading, and in agreement with the general view of epidemic alert. This work is helpful to understand the effects of epidemic alert on disease spreading

West Bank Gaza Geo-MIS System

Data.gov (United States)

US Agency for International Development — The Geo-MIS System is USAID/West Bank and Gaza's primary system for capturing and managing projectrelated information. Its purpose is to assist USAID and its...

Ten Putative Contributors to the Obesity Epidemic

Science.gov (United States)

McAllister, Emily J.; Dhurandhar, Nikhil V.; Keith, Scott W.; Aronne, Louis J.; Barger, Jamie; Baskin, Monica; Benca, Ruth M.; Biggio, Joseph; Boggiano, Mary M.; Eisenmann, Joe C.; Elobeid, Mai; Fontaine, Kevin R.; Gluckman, Peter; Hanlon, Erin C.; Katzmarzyk, Peter; Pietrobelli, Angelo; Redden, David T.; Ruden, Douglas M.; Wang, Chenxi; Waterland, Robert A.; Wright, Suzanne M.; Allison, David B.

2010-01-01

The obesity epidemic is a global issue and shows no signs of abating, while the cause of this epidemic remains unclear. Marketing practices of energy-dense foods and institutionally-driven declines in physical activity are the alleged perpetrators for the epidemic, despite a lack of solid evidence to demonstrate their causal role. While both may contribute to obesity, we call attention to their unquestioned dominance in program funding and public efforts to reduce obesity, and propose several alternative putative contributors that would benefit from equal consideration and attention. Evidence for microorganisms, epigenetics, increasing maternal age, greater fecundity among people with higher adiposity, assortative mating, sleep debt, endocrine disruptors, pharmaceutical iatrogenesis, reduction in variability of ambient temperatures, and intrauterine and intergenerational effects, as contributing factors to the obesity epidemic are reviewed herein. While the evidence is strong for some contributors such as pharmaceutical-induced weight gain, it is still emerging for other reviewed factors. Considering the role of such putative etiological factors of obesity may lead to comprehensive, cause specific, and effective strategies for prevention and treatment of this global epidemic. PMID:19960394

Using GeoRePORT to report socio-economic potential for geothermal development

Energy Technology Data Exchange (ETDEWEB)

Young, Katherine R.; Levine, Aaron

2018-07-01

The Geothermal Resource Portfolio Optimization and Reporting Tool (GeoRePORT, http://en.openei.org/wiki/GeoRePORT) was developed for reporting resource grades and project readiness levels, providing the U.S. Department of Energy a consistent and comprehensible means of evaluating projects. The tool helps funding organizations (1) quantitatively identify barriers, (2) develop measureable goals, (3) objectively evaluate proposals, including contribution to goals, (4) monitor progress, and (5) report portfolio performance. GeoRePORT assesses three categories: geological, technical, and socio-economic. Here, we describe GeoRePORT, then focus on the socio-economic assessment and its applications for assessing deployment potential in the U.S. Socio-economic attributes include land access, permitting, transmission, and market.

New Results from the Geoengineering Model Intercomparison Project (GeoMIP)

Science.gov (United States)

Robock, A.; Kravitz, B.

2013-12-01

The Geoengineering Model Intercomparison Project (GeoMIP) was designed to determine robust climate system model responses to Solar Radiation Management (SRM). While mitigation (reducing greenhouse gases emissions) is the most effective way of reducing future climate change, SRM (the deliberate modification of incoming solar radiation) has been proposed as a means of temporarily alleviating some of the effects of global warming. For society to make informed decisions as to whether SRM should ever be implemented, information is needed on the benefits, risks, and side effects, and GeoMIP seeks to aid in that endeavor. GeoMIP has organized four standardized climate model simulations involving reduction of insolation or increased amounts of stratospheric sulfate aerosols to counteract increasing greenhouse gases. Thirteen comprehensive atmosphere-ocean general circulation models have participated in the project so far. GeoMIP is a 'CMIP Coordinated Experiment' as part of the Climate Model Intercomparison Project 5 (CMIP5) and has been endorsed by SPARC (Stratosphere-troposphere Processes And their Role in Climate). GeoMIP has held three international workshops and has produced a number of recent journal articles. GeoMIP has found that if increasing greenhouse gases could be counteracted with insolation reduction, the global average temperature could be kept constant, but global average precipitation would reduce, particularly in summer monsoon regions around the world. Temperature changes would also not be uniform. The tropics would cool, but high latitudes would warm, with continuing, but reduced sea ice and ice sheet melting. Temperature extremes would still increase, but not as much as without SRM. If SRM were halted all at once, there would be rapid temperature and precipitation increases at 5-10 times the rates from gradual global warming. SRM combined with CO2 fertilization would have small impacts on rice production in China, but would increase maize production

The Spatio-Temporal Evolution of Geo-Economic Relationships between China and ASEAN Countries: Competition or Cooperation?

Directory of Open Access Journals (Sweden)

Shufang Wang

2017-06-01

Full Text Available In the last 30 years, China’s economic power has experienced great changes and has brought about a profound impact on the world economy. This led us to ask a question: do changes in China’s economic power shift the geo-economic relationships between China and its neighboring countries? To answer this question, we researched the evolution of geo-economic relationships between China and the Association of Southeast Asian Nations (ASEAN countries. Using the Euclidean distance method, we explored the changes in these geo-economic relationships between China and ASEAN countries from 1980 to 2014. Our findings resulted in five conclusions: (1 Over time, geo-economic relationships between China and ASEAN countries remained relatively stable. (2 Geographically, the main geo-economic relationships between China and continental ASEAN countries were complementary, while the main geo-economic relationships between China and island ASEAN countries were competitive. (3 Geopolitics and geo-culture were attributed to the changes in geo-economic relationships. (4 The evolution of geo-economic relationships was characterized by path dependence. (5 Geo-economic relationships between China and ASEAN countries could be classified into four types: game type, with high cooperation and competition; complementary type, with high cooperation and low competition; fight type, with low cooperation and high competition; and loose type, with low cooperation and competition. Our findings contribute to improving the understanding of geo-economic relationships.

The GEO-3 Scenarios 2002-2032. Quantification and Analysis of Environmental Impacts

Energy Technology Data Exchange (ETDEWEB)

Bakkes, J.; Potting, J. (eds.) [National Institute for Public Health and the Environment RIVM, Bilthoven (Netherlands); Henrichs, T. [Center for Environmental Systems Research CESR, University of Kassel, Kassel (Germany); Kemp-Benedict, E.; Raskin, P. [Stockholm Environment Institute SEI, Boston, MA (United States); Masui, T.; Rana, A. [National Institute for Environmental Studies NIES, Ibaraki (Japan); Nellemann, C. [United Nations Environment Programme UNEP, GRID Global and Regional Integrated Data centres Arendal, Lillehammer (Norway); Rothman, D. [International Centre for Integrative Studies ICIS, Maastricht University, Maastricht (Netherlands)

2004-07-01

The four contrasting visions of the world's next three decades as presented in the third Global Environment Outlook (GEO-3) have many implications for policy - from hunger to climate change and from freshwater issues to biodiversity. The four scenarios analysed are Markets First, Policy First, Security First, Sustainability First. Presenting a deeper analysis than the original GEO-3 report, this Technical Report quantifies the impacts of the scenarios for all 19 GEO 'sub-regions', such as Eastern Africa and Central Europe. Regional impacts are discussed in the context of sustainable development. The report summary compares the impacts of the four scenarios across regions - and for the world as a whole - in the light of internationally agreed targets including those in the Millennium Declaration where applicable. It provides an account of the analytical methods, key assumptions, models and other tools, along with the approaches used in the analyses. Based on the methods and results, the report looks back on the process of producing the forward-looking analysis for GEO-3. Were all analytical centres on the same track? Did the approach adopted for GEO-3 contribute to the overall GEO objective of strengthening global-regional involvement and linkages?.

Complex Functions with GeoGebra

Science.gov (United States)

Breda, Ana Maria D'azevedo; Dos Santos, José Manuel Dos Santos

2016-01-01

Complex functions, generally feature some interesting peculiarities, seen as extensions of real functions. The visualization of complex functions properties usually requires the simultaneous visualization of two-dimensional spaces. The multiple Windows of GeoGebra, combined with its ability of algebraic computation with complex numbers, allow the…

Geo-neutrinos and earth's interior

International Nuclear Information System (INIS)

Fiorentini, Gianni; Lissia, Marcello; Mantovani, Fabio

2007-01-01

The deepest hole that has ever been dug is about 12 km deep. Geochemists analyze samples from the Earth's crust and from the top of the mantle. Seismology can reconstruct the density profile throughout all Earth, but not its composition. In this respect, our planet is mainly unexplored. Geo-neutrinos, the antineutrinos from the progenies of U, Th and 40 K decays in the Earth, bring to the surface information from the whole planet, concerning its content of natural radioactive elements. Their detection can shed light on the sources of the terrestrial heat flow, on the present composition, and on the origins of the Earth. Geo-neutrinos represent a new probe of our planet, which can be exploited as a consequence of two fundamental advances that occurred in the last few years: the development of extremely low background neutrino detectors and the progress on understanding neutrino propagation. We review the status and the prospects of the field

The effect of recognizability on figure-ground processing: does it affect parsing or only figure selection?

Science.gov (United States)

Navon, David

2011-03-01

Though figure-ground assignment has been shown to be probably affected by recognizability, it appears sensible that object recognition must follow at least the earlier process of figure-ground segregation. To examine whether or not rudimentary object recognition could, counterintuitively, start even before the completion of the stage of parsing in which figure-ground segregation is done, participants were asked to respond, in a go/no-go fashion, whenever any out of 16 alternative connected patterns (that constituted familiar stimuli in the upright orientation) appeared. The white figure of the to-be-attended stimulus-target or foil-could be segregated from the white ambient ground only by means of a frame surrounding it. Such a frame was absent until the onset of target display. Then, to manipulate organizational quality, the greyness of the frame was either gradually increased from zero (in Experiment 1) or changed abruptly to a stationary level whose greyness was varied between trials (in Experiments 2 and 3). Stimulus recognizability was manipulated by orientation angle. In all three experiments the effect of recognizability was found to be considerably larger when organizational quality was minimal due to an extremely faint frame. This result is argued to be incompatible with any version of a serial thesis suggesting that processing aimed at object recognition starts only with a good enough level of organizational quality. The experiments rather provide some support to the claim, termed here "early interaction hypothesis", positing interaction between early recognition processing and preassignment parsing processes.

Epidemic spreading in a hierarchical social network.

Science.gov (United States)

Grabowski, A; Kosiński, R A

2004-09-01

A model of epidemic spreading in a population with a hierarchical structure of interpersonal interactions is described and investigated numerically. The structure of interpersonal connections is based on a scale-free network. Spatial localization of individuals belonging to different social groups, and the mobility of a contemporary community, as well as the effectiveness of different interpersonal interactions, are taken into account. Typical relations characterizing the spreading process, like a range of epidemic and epidemic curves, are discussed. The influence of preventive vaccinations on the spreading process is investigated. The critical value of preventively vaccinated individuals that is sufficient for the suppression of an epidemic is calculated. Our results are compared with solutions of the master equation for the spreading process and good agreement of the character of this process is found.

Encoding of Geological knowledge in the GeoPiemonte Map Data Base

Science.gov (United States)

Piana, Fabrizio; Lombardo, Vincenzo; Mimmo, Dario; Barale, Luca; Irace, Andrea; Mulazzano, Elia

2017-04-01

In modern digital geological maps and geo-database, namely those devoted to interactive WebGIS services, there is the need to make explicit the geological assumptions in the process of the design and compilation of the Map Geodatabase. The Geodatabase of the Piemonte Geological Map, which consists of several thousands of Geologic Units and Geologic Structures, was designed in a way suitable for linking the knowledge of the geological domain at hand to more general levels of knowledge, represented in existing Earth Sciences ontologies and in a domain ontology (OntoGeonous), specifically designed for the project, though with a wide applicability in mind. The Geologic Units and Geologic Structures of the GeoPiemonte Map have been spatially correlated through the whole region, referring to a non-formal hierarchical scheme, which gives the parental relations between several orders of Geologic Units, putting them in relations with some main Geologic Events. The scheme reports the subdivisions we did on the Alps-Apennines orogenic belt (which constitutes the Piemonte geological framework) on which the architecture of the GeoDB relied. This contribution describes how the two different knowledge levels (specific domain vs. general knowledge) are assimilated within the GeoPiemonte informative system, providing relations between the contents of the geodatabase and the encoded concepts of the reference ontologies. Initiatives such as GeoScience Markup Language (GeoSciML 4.01, 2016 (1) and INSPIRE "Data Specification on Geology" (an operative simplification of GeoSciML, last version is 3.0, 2013) (2), as well as the recent terminological shepherding of the Geoscience Terminology Working Group (GTWG), provided us the authoritative standard geological source for knowledge encoding. Consistency and interoperability of geological data were thus sought, by classifying geologic features in an ontology-driven Data Model, while objects were described using GeoSciML controlled

East–West GEO Satellite Station-Keeping with Degraded Thruster Response

Directory of Open Access Journals (Sweden)

Stoian Borissov

2015-09-01

Full Text Available The higher harmonic terms of Earth’s gravitational potential slowly modify the nominal longitude of geostationary Earth orbit (GEO satellites, while the third-body presence (Moon and Sun mainly affects their latitude. For this reason, GEO satellites periodically need to perform station-keeping maneuvers, namely, east–west and north–south maneuvers to compensate for longitudinal and latitudinal variations, respectively. During the operational lifetime of GEO satellites, the thrusters’ response when commanded to perform these maneuvers slowly departs from the original nominal impulsive behavior. This paper addresses the practical problem of how to perform reliable east–west station-keeping maneuvers when thruster response is degraded. The need for contingency intervention from ground-based satellite operators is reduced by breaking apart the scheduled automatic station-keeping maneuvers into smaller maneuvers. Orbital alignment and attitude are tracked on-board during and in between sub-maneuvers, and any off nominal variations are corrected for with subsequent maneuvers. These corrections are particularly important near the end of the lifetime of GEO satellites, where thruster response is farthest from nominal performance.

An integrated risk sensing system for geo-structural safety

Institute of Scientific and Technical Information of China (English)

H.W. Huang; D.M. Zhang; B.M. Ayyub

2017-01-01

Over the last decades, geo-structures are experiencing a rapid development in China. The potential risks inherent in the huge amount of construction and asset operation projects in China were well managed in the major project, i.e. the project of Shanghai Yangtze tunnel in 2002. Since then, risk assessment of geo-structures has been gradually developed from a qualitative manner to a quantitative manner. However, the current practices of risk management have been paid considerable attention to the assessment, but little on risk control. As a result, the responses to risks occurrences after a comprehensive assessment are basically too late. In this paper, a smart system for risk sensing incorporating the wireless sensor network (WSN) on-site visualization techniques and the resilience-based repair strategy was proposed. The merit of this system is the real-time monitoring for geo-structural performance and dynamic pre-warning for safety of on-site workers. The sectional convergence, joint opening, and seepage of segmental lining of shield tunnel were monitored by the micro-electro-mechanical systems (MEMS) based sensors. The light emitting diode (LED) coupling with the above WSN system was used to indicate different risk levels on site. By sensing the risks and telling the risks in real time, the geo-risks could be controlled and the safety of geo-structures could be assured to a certain degree. Finally, a resilience-based analysis model was proposed for designing the repair strategy by using the measured data from the WSN system. The application and efficiency of this system have been validated by two cases including Shanghai metro tunnel and underwater road tunnel.

Geo-communication and Web-based Spatial Data Infrastructure

DEFF Research Database (Denmark)

Brodersen, Lars; Nielsen, Anders

2006-01-01

-services. This paper discusses the relations between the different components of SDI and geo-communication as well as the impacts thereof. Discussed is also a model for the organization of the passive components of the infrastructure; i.e. legislation, collaboration, standards, models, specifications, web......! Therefore there is a strong need for theories and models that can describe this complex web in the SDI and geo-communication consisting of active components, passive components, users and information in order to make it possible to handle the complexity and to give the necessary framework....

Observation of GEO Satellite Above Thailand’s Sky

Science.gov (United States)

Kasonsuwan, K.; Wannawichian, S.; Kirdkao, T.

2017-09-01

The direct observations of Geostationary Orbit (GEO) satellites above Thailand’s sky by 0.7-meters telescope were proceeded at Inthanon Mt., Chiang Mai, Thailand. The observation took place at night with Sidereal Stare Mode (SSM). With this observing mode, the moving object will appear as a streak. The star identification for image calibration is based on (1) a star catalogue, (2) the streak detection of the satellite using the software and (3) the extraction of the celestial coordinate of the satellite as a predicted position. Finally, the orbital elements for GEO satellites were calculated.

Teaching Plate Tectonic Concepts using GeoMapApp Learning Activities

Science.gov (United States)

Goodwillie, A. M.; Kluge, S.

2012-12-01

GeoMapApp Learning Activities ( http://serc.carleton.edu/geomapapp/collection.html ) can help educators to expose undergraduate students to a range of earth science concepts using high-quality data sets in an easy-to-use map-based interface called GeoMapApp. GeoMapApp Learning Activities require students to interact with and analyse research-quality geoscience data as a means to explore and enhance their understanding of underlying content and concepts. Each activity is freely available through the SERC-Carleton web site and offers step-by-step student instructions and answer sheets. Also provided are annotated educator versions of the worksheets that include teaching tips, additional content and suggestions for further work. The activities can be used "off-the-shelf". Or, since the educator may require flexibility to tailor the activities, the documents are provided in Word format for easy modification. Examples of activities include one on the concept of seafloor spreading that requires students to analyse global seafloor crustal age data to calculate spreading rates in different ocean basins. Another activity has students explore hot spots using radiometric age dating of rocks along the Hawaiian-Emperor seamount chain. A third focusses upon the interactive use of contours and profiles to help students visualise 3-D topography on 2-D computer screens. A fourth activity provides a study of mass wasting as revealed through geomorphological evidence. The step-by-step instructions and guided inquiry approach reduce the need for teacher intervention whilst boosting the time that students can spend on productive exploration and learning. The activities can be used, for example, in a classroom lab with the educator present and as self-paced assignments in an out-of-class setting. GeoMapApp Learning Activities are funded through the NSF GeoEd program and are aimed at students in the introductory undergraduate, community college and high school levels. The activities are

High performance geospatial and climate data visualization using GeoJS

Science.gov (United States)

Chaudhary, A.; Beezley, J. D.

2015-12-01

GeoJS (https://github.com/OpenGeoscience/geojs) is an open-source library developed to support interactive scientific and geospatial visualization of climate and earth science datasets in a web environment. GeoJS has a convenient application programming interface (API) that enables users to harness the fast performance of WebGL and Canvas 2D APIs with sophisticated Scalable Vector Graphics (SVG) features in a consistent and convenient manner. We started the project in response to the need for an open-source JavaScript library that can combine traditional geographic information systems (GIS) and scientific visualization on the web. Many libraries, some of which are open source, support mapping or other GIS capabilities, but lack the features required to visualize scientific and other geospatial datasets. For instance, such libraries are not be capable of rendering climate plots from NetCDF files, and some libraries are limited in regards to geoinformatics (infovis in a geospatial environment). While libraries such as d3.js are extremely powerful for these kinds of plots, in order to integrate them into other GIS libraries, the construction of geoinformatics visualizations must be completed manually and separately, or the code must somehow be mixed in an unintuitive way.We developed GeoJS with the following motivations:• To create an open-source geovisualization and GIS library that combines scientific visualization with GIS and informatics• To develop an extensible library that can combine data from multiple sources and render them using multiple backends• To build a library that works well with existing scientific visualizations tools such as VTKWe have successfully deployed GeoJS-based applications for multiple domains across various projects. The ClimatePipes project funded by the Department of Energy, for example, used GeoJS to visualize NetCDF datasets from climate data archives. Other projects built visualizations using GeoJS for interactively exploring

Update on the NASA GEOS-5 Aerosol Forecasting and Data Assimilation System

Science.gov (United States)

Colarco, Peter; da Silva, Arlindo; Aquila, Valentina; Bian, Huisheng; Buchard, Virginie; Castellanos, Patricia; Darmenov, Anton; Follette-Cook, Melanie; Govindaraju, Ravi; Keller, Christoph;

A simple model for behaviour change in epidemics

Directory of Open Access Journals (Sweden)

Brauer Fred

2011-02-01

Full Text Available Abstract Background People change their behaviour during an epidemic. Infectious members of a population may reduce the number of contacts they make with other people because of the physical effects of their illness and possibly because of public health announcements asking them to do so in order to decrease the number of new infections, while susceptible members of the population may reduce the number of contacts they make in order to try to avoid becoming infected. Methods We consider a simple epidemic model in which susceptible and infectious members respond to a disease outbreak by reducing contacts by different fractions and analyze the effect of such contact reductions on the size of the epidemic. We assume constant fractional reductions, without attempting to consider the way in which susceptible members might respond to information about the epidemic. Results We are able to derive upper and lower bounds for the final size of an epidemic, both for simple and staged progression models. Conclusions The responses of uninfected and infected individuals in a disease outbreak are different, and this difference affects estimates of epidemic size.

Different Epidemic Models on Complex Networks

International Nuclear Information System (INIS)

Zhang Haifeng; Small, Michael; Fu Xinchu

2009-01-01

Models for diseases spreading are not just limited to SIS or SIR. For instance, for the spreading of AIDS/HIV, the susceptible individuals can be classified into different cases according to their immunity, and similarly, the infected individuals can be sorted into different classes according to their infectivity. Moreover, some diseases may develop through several stages. Many authors have shown that the individuals' relation can be viewed as a complex network. So in this paper, in order to better explain the dynamical behavior of epidemics, we consider different epidemic models on complex networks, and obtain the epidemic threshold for each case. Finally, we present numerical simulations for each case to verify our results.

HIV epidemics in Shenzhen and Chongqing, China.

Directory of Open Access Journals (Sweden)

Shu Yang

Full Text Available Men who have sex with men (MSM and heterosexuals are the populations with the fastest growing HIV infection rates in China. We characterize the epidemic growth and age patterns between these two routes from 2004 to 2015 in Chongqing and Shenzhen, China.Data were downloaded from the National HIV/ AIDS Comprehensive Response Information Management System. For the new HIV diagnoses of heterosexuals and MSM in both cities, we estimated the growth rates by fitting different sub-exponential models. Heat maps are used to show their age patterns. We used histograms to compare these patterns by birth cohort.The MSM epidemics grew significantly in both cities. Chongqing experienced quadratic growth in HIV reported cases with an estimated growth rate of 0.086 per week and a "deceleration rate" of 0.673. HIV reported cases of MSM in Shenzhen grew even more drastically with a growth rate of 0.033 per week and "deceleration rate" of 0.794. The new infections are mainly affecting the ages of 18 to 30 in Chongqing and ages of 20 to 35 in Shenzhen. They peaked in early 1990's and mid-1990's birth cohorts in Chongqing and Shenzhen respectively. The HIV epidemic among heterosexuals grew rapidly in both cities. The growth rates were estimated as 0.02 and 0.028 in Chongqing and Shenzhen respectively whereas the "deceleration rates" were 0.878 and 0.790 in these two places. It affected mostly aged 18 to 75 in males and 18 to 65 in females in Chongqing and aged 18 to 45 in males and 18 to 50 in females in Shenzhen in 2015. In Chongqing, the heterosexual female epidemics display two peaks in HIV diagnoses in the birth cohorts of early 1950's and early 1980's, with heterosexual male epidemics peaked in early 1940's and early 1960's. The heterosexual male and female epidemics display higher rates in the birth cohort 1940-1960, than the birth cohort 1960-1990. It peaked in birth cohorts of 1950's and 1980's in Shenzhen.We revealed striking differences in epidemic growth

Geo-electric measurements – internal state of historic masonry

OpenAIRE

Schueremans, Luc

2009-01-01

A geophysical resistivity measuring device was modified to perform automatic monitoring of historical masonry structures before, during and after grout injection for consolidation purposes. The obtained image is called a geo-electrical tomography. The technique was used to evaluate the deteriorated masonry of the recently partly collapsed Maagdentoren in Zichem,(B). Geo-electric measuring techniques have been adapted from application in geology to be used as a non-destructive technique for t...

Concurrency-Induced Transitions in Epidemic Dynamics on Temporal Networks.

Science.gov (United States)

Onaga, Tomokatsu; Gleeson, James P; Masuda, Naoki

2017-09-08

Social contact networks underlying epidemic processes in humans and animals are highly dynamic. The spreading of infections on such temporal networks can differ dramatically from spreading on static networks. We theoretically investigate the effects of concurrency, the number of neighbors that a node has at a given time point, on the epidemic threshold in the stochastic susceptible-infected-susceptible dynamics on temporal network models. We show that network dynamics can suppress epidemics (i.e., yield a higher epidemic threshold) when the node's concurrency is low, but can also enhance epidemics when the concurrency is high. We analytically determine different phases of this concurrency-induced transition, and confirm our results with numerical simulations.

Concurrency-Induced Transitions in Epidemic Dynamics on Temporal Networks

Science.gov (United States)

Onaga, Tomokatsu; Gleeson, James P.; Masuda, Naoki

2017-09-01

Social contact networks underlying epidemic processes in humans and animals are highly dynamic. The spreading of infections on such temporal networks can differ dramatically from spreading on static networks. We theoretically investigate the effects of concurrency, the number of neighbors that a node has at a given time point, on the epidemic threshold in the stochastic susceptible-infected-susceptible dynamics on temporal network models. We show that network dynamics can suppress epidemics (i.e., yield a higher epidemic threshold) when the node's concurrency is low, but can also enhance epidemics when the concurrency is high. We analytically determine different phases of this concurrency-induced transition, and confirm our results with numerical simulations.

Can influenza epidemics be prevented by voluntary vaccination?

Directory of Open Access Journals (Sweden)

Raffaele Vardavas

2007-05-01

Full Text Available Previous modeling studies have identified the vaccination coverage level necessary for preventing influenza epidemics, but have not shown whether this critical coverage can be reached. Here we use computational modeling to determine, for the first time, whether the critical coverage for influenza can be achieved by voluntary vaccination. We construct a novel individual-level model of human cognition and behavior; individuals are characterized by two biological attributes (memory and adaptability that they use when making vaccination decisions. We couple this model with a population-level model of influenza that includes vaccination dynamics. The coupled models allow individual-level decisions to influence influenza epidemiology and, conversely, influenza epidemiology to influence individual-level decisions. By including the effects of adaptive decision-making within an epidemic model, we can reproduce two essential characteristics of influenza epidemiology: annual variation in epidemic severity and sporadic occurrence of severe epidemics. We suggest that individual-level adaptive decision-making may be an important (previously overlooked causal factor in driving influenza epidemiology. We find that severe epidemics cannot be prevented unless vaccination programs offer incentives. Frequency of severe epidemics could be reduced if programs provide, as an incentive to be vaccinated, several years of free vaccines to individuals who pay for one year of vaccination. Magnitude of epidemic amelioration will be determined by the number of years of free vaccination, an individuals' adaptability in decision-making, and their memory. This type of incentive program could control epidemics if individuals are very adaptable and have long-term memories. However, incentive-based programs that provide free vaccination for families could increase the frequency of severe epidemics. We conclude that incentive-based vaccination programs are necessary to control

Geo3DML: A standard-based exchange format for 3D geological models

Science.gov (United States)

Wang, Zhangang; Qu, Honggang; Wu, Zixing; Wang, Xianghong

2018-01-01

A geological model (geomodel) in three-dimensional (3D) space is a digital representation of the Earth's subsurface, recognized by geologists and stored in resultant geological data (geodata). The increasing demand for data management and interoperable applications of geomodelscan be addressed by developing standard-based exchange formats for the representation of not only a single geological object, but also holistic geomodels. However, current standards such as GeoSciML cannot incorporate all the geomodel-related information. This paper presents Geo3DML for the exchange of 3D geomodels based on the existing Open Geospatial Consortium (OGC) standards. Geo3DML is based on a unified and formal representation of structural models, attribute models and hierarchical structures of interpreted resultant geodata in different dimensional views, including drills, cross-sections/geomaps and 3D models, which is compatible with the conceptual model of GeoSciML. Geo3DML aims to encode all geomodel-related information integrally in one framework, including the semantic and geometric information of geoobjects and their relationships, as well as visual information. At present, Geo3DML and some supporting tools have been released as a data-exchange standard by the China Geological Survey (CGS).

GeoSciML version 3: A GML application for geologic information

Science.gov (United States)

International Union of Geological Sciences., I. C.; Richard, S. M.

2011-12-01

After 2 years of testing and development, XML schema for GeoSciML version 3 are now ready for application deployment. GeoSciML draws from many geoscience data modelling efforts to establish a common suite of feature types to represent information associated with geologic maps (materials, structures, and geologic units) and observations including structure data, samples, and chemical analyses. After extensive testing and use case analysis, in December 2008 the CGI Interoperability Working Group (IWG) released GeoSciML 2.0 as an application schema for basic geological information. GeoSciML 2.0 is in use to deliver geologic data by the OneGeology Europe portal, the Geological Survey of Canada Groundwater Information Network (wet GIN), and the Auscope Mineral Resources portal. GeoSciML to version 3.0 is updated to OGC Geography Markup Language v3.2, re-engineered patterns for association of element values with controlled vocabulary concepts, incorporation of ISO19156 Observation and Measurement constructs for representing numeric and categorical values and for representing analytical data, incorporation of EarthResourceML to represent mineral occurrences and mines, incorporation of the GeoTime model to represent GSSP and stratigraphic time scale, and refactoring of the GeoSciML namespace to follow emerging ISO practices for decoupling of dependencies between standardized namespaces. These changes will make it easier for data providers to link to standard vocabulary and registry services. The depth and breadth of GeoSciML remains largely unchanged, covering the representation of geologic units, earth materials and geologic structures. ISO19156 elements and patterns are used to represent sampling features such as boreholes and rock samples, as well as geochemical and geochronologic measurements. Geologic structures include shear displacement structures (brittle faults and ductile shears), contacts, folds, foliations, lineations and structures with no preferred

Epidemics: Lessons from the past and current patterns of response

Science.gov (United States)

Martin, Paul

2008-09-01

Hippocrates gave the term 'epidemic' its medical meaning. From antiquity to modern times, the meaning of the word epidemic has continued to evolve. Over the centuries, researchers have reached an understanding of the varying aspects of epidemics and have tried to combat them. The role played by travel, trade, and human exchanges in the propagation of epidemic infectious diseases has been understood. In 1948, the World Health Organization was created and given the task of advancing ways of combating epidemics. An early warning system to combat epidemics has been implemented by the WHO. The Global Outbreak Alert and Response Network (GOARN) is collaboration between existing institutions and networks that pool their human and technical resources to fight outbreaks. Avian influenza constitutes currently the most deadly epidemic threat, with fears that it could rapidly reach pandemic proportions and put several thousands of lives in jeopardy. Thanks to the WHO's support, most of the world's countries have mobilised and implemented an 'Action Plan for Pandemic Influenza'. As a result, most outbreaks of the H5N1 avian flu virus have so far been speedily contained. Cases of dengue virus introduction in countries possessing every circumstance required for its epidemic spread provide another example pertinent to the prevention of epidemics caused by vector-borne pathogens.

3D visualization of geo-scientific data for research and development purposes

International Nuclear Information System (INIS)

Mangeot, A.; Tabani, P.; Yven, B.; Dewonck, S.; Napier, B.; Waston, C.J.; Baker, G.R.; Shaw, R.P.

2012-01-01

Document available in extended abstract form only. In recent years national geoscience organizations have increasingly utilized 3D model data as an output to the stakeholder community. Advances in both software and hardware have led to an increasing use of 3D depictions of geoscience data alongside the standard 2D data formats such as maps and GIS data. By characterizing geoscience data in 3D, knowledge transfer between geo-scientists and stakeholders is improved as the mindset and thought processes are communicated more effectively in a 3D model than in a 2D flat file format. 3D models allow the user to understand the conceptual basis of the 2D data and aids the decision making process at local, regional and national scales. In April 29 2009 a Memorandum of Understanding has been signed between BGS and Andra in order to provide an improved mechanism for technical cooperation and collaboration in the Earth sciences. A specific agreement was signed the 1 December 2009 to evaluate the capacity of a 3D software called GeoVisionary to represent the Underground research Laboratory and its environment. GeoVisionary is the result of collaboration between Virtalis and the British Geological Survey. Combining a powerful data engine with a virtual geological tool-kit enables geo-scientists to visualize, analyze and share large datasets seamlessly in an immersive, real time environment A typical GeoVisionary environment contains one or more the following: 3D terrain files, Aerial photography, Bitmap overlays of specialized data, Vector shapes and outlines, 3D object Models. The key benefits are: Continuously stream geometry and photography in real time, Visualise 2D GIS data in immersive 3D stereo, Diverse datasets in a single environment, 'Fly' to any part of the data in seconds, Infinitely scalable, Prepare and evaluate before you begin fieldwork, Enhance team-working and increased efficiency of field operations, Clearer communication of results. Now, the 3D model has been

The GeoSteiner software package for computing Steiner trees in the plane

DEFF Research Database (Denmark)

Juhl, Daniel; Warme, David M.; Winter, Pawel

The GeoSteiner software package has for more than 10 years been the fastest (publicly available) program for computing exact solutions to Steiner tree problems in the plane. The computational study by Warme, Winter and Zachariasen, published in 2000, documented the performance of the GeoSteiner...... approach --- allowing the exact solution of Steiner tree problems with more than a thousand terminals. Since then, a number of algorithmic enhancements have improved the performance of the software package significantly. In this computational study we run the current code on the largest problem instances...... from the 2000-study, and on a number of larger problem instances. The computational study is performed using both the publicly available GeoSteiner 3.1 code base, and the commercial GeoSteiner 4.0 code base....

GEO activities towards improved Geophysical monitoring. A key input to Disaster Risk Reduction.

Science.gov (United States)

Achache, J.; Rum, G.

2007-05-01

GEO has been established in 2005 with the main objective to put in place a Global, Coordinated, Comprehensive and Sustained System of Observing Systems (GEOSS) to serve 9 Social Benefit Areas, among which Disaster Risk Reduction. The paper will first set up the reference GEO framework, through a brief description of GEOSS key features, architectural functions and capacity building, and then will recall the value of the Geophysical observations, coming both from in situ and remote (satellite) systems, and, even more important, of their integration. GEO activities related to Geophysical monitoring and the use of related observation to foster social benefits in the Disaster Risk Reduction area will then be shortly described, together with the on-going key actions, including specific examples on key scientific/technical and data sharing aspects associated to GEOSS implementation. Special attention will be devoted on how Capacity Building strategy and activities are addressed through GEOSS development, building on infrastructure and programs under consolidation within GEO framework, such as the GEOSS Information collection and dissemination systems under development (GEONETCast, GEO Web Portal, GEO Clearinghouse) and the UN programs such as SPIDER (SPace based Information for Disaster management and Emergency Response) and UNOSAT. The paper will provide recommendations on the way forward for the implementation of Disaster Risk Management provisions as an integral part of sustainable development, also with the objective of creating within GEO a supporting framework to UNDP and World Bank activities on Risk Identification and Assessment.

Designing human centered GeoVisualization application--the SanaViz--for telehealth users: a case study.

Science.gov (United States)

Joshi, Ashish; de Araujo Novaes, Magdala; Machiavelli, Josiane; Iyengar, Sriram; Vogler, Robert; Johnson, Craig; Zhang, Jiajie; Hsu, Chiehwen E

2012-01-01

Public health data is typically organized by geospatial unit. GeoVisualization (GeoVis) allows users to see information visually on a map. Examine telehealth users' perceptions towards existing public health GeoVis applications and obtains users' feedback about features important for the design and development of Human Centered GeoVis application "the SanaViz". We employed a cross sectional study design using mixed methods approach for this pilot study. Twenty users involved with the NUTES telehealth center at Federal University of Pernambuco (UFPE), Recife, Brazil were enrolled. Open and closed ended questionnaires were used to gather data. We performed audio recording for the interviews. Information gathered included socio-demographics, prior spatial skills and perception towards use of GeoVis to evaluate telehealth services. Card sorting and sketching methods were employed. Univariate analysis was performed for the continuous and categorical variables. Qualitative analysis was performed for open ended questions. Existing Public Health GeoVis applications were difficult to use. Results found interaction features zooming, linking and brushing and representation features Google maps, tables and bar chart as most preferred GeoVis features. Early involvement of users is essential to identify features necessary to be part of the human centered GeoVis application "the SanaViz".

The Intention to Use GeoGebra in the Teaching of Mathematics among Malaysian Teachers

Science.gov (United States)

Belgheis, Soheila; Kamalludeen, Rosemaliza

2018-01-01

This quantitative study examined Malaysian teachers' perception towards using GeoGebra in mathematics teaching. The relationship between teachers' Perceived Current Competencies (PCC) of GeoGebra, and Intention to Use (IU) it as well as the difference between male and female teachers and between users and non-users of GeoGebra were investigated.…

Epidemic Network Failures in Optical Transport Networks

DEFF Research Database (Denmark)

Ruepp, Sarah Renée; Katsikas, Dimitrios; Fagertun, Anna Manolova

2013-01-01

This paper presents a failure propagation model for transport networks which are affected by epidemic failures. The network is controlled using the GMPLS protocol suite. The Susceptible Infected Disabled (SID) epidemic model is investigated and new signaling functionality of GMPLS to support...

Modeling Epidemics Spreading on Social Contact Networks.

Science.gov (United States)

Zhang, Zhaoyang; Wang, Honggang; Wang, Chonggang; Fang, Hua

2015-09-01

Social contact networks and the way people interact with each other are the key factors that impact on epidemics spreading. However, it is challenging to model the behavior of epidemics based on social contact networks due to their high dynamics. Traditional models such as susceptible-infected-recovered (SIR) model ignore the crowding or protection effect and thus has some unrealistic assumption. In this paper, we consider the crowding or protection effect and develop a novel model called improved SIR model. Then, we use both deterministic and stochastic models to characterize the dynamics of epidemics on social contact networks. The results from both simulations and real data set conclude that the epidemics are more likely to outbreak on social contact networks with higher average degree. We also present some potential immunization strategies, such as random set immunization, dominating set immunization, and high degree set immunization to further prove the conclusion.

Air Quality Forecasts Using the NASA GEOS Model

Science.gov (United States)

Keller, Christoph A.; Knowland, K. Emma; Nielsen, Jon E.; Orbe, Clara; Ott, Lesley; Pawson, Steven; Saunders, Emily; Duncan, Bryan; Follette-Cook, Melanie; Liu, Junhua;

Stochastic analysis of epidemics on adaptive time varying networks

Science.gov (United States)

Kotnis, Bhushan; Kuri, Joy

2013-06-01

Many studies investigating the effect of human social connectivity structures (networks) and human behavioral adaptations on the spread of infectious diseases have assumed either a static connectivity structure or a network which adapts itself in response to the epidemic (adaptive networks). However, human social connections are inherently dynamic or time varying. Furthermore, the spread of many infectious diseases occur on a time scale comparable to the time scale of the evolving network structure. Here we aim to quantify the effect of human behavioral adaptations on the spread of asymptomatic infectious diseases on time varying networks. We perform a full stochastic analysis using a continuous time Markov chain approach for calculating the outbreak probability, mean epidemic duration, epidemic reemergence probability, etc. Additionally, we use mean-field theory for calculating epidemic thresholds. Theoretical predictions are verified using extensive simulations. Our studies have uncovered the existence of an “adaptive threshold,” i.e., when the ratio of susceptibility (or infectivity) rate to recovery rate is below the threshold value, adaptive behavior can prevent the epidemic. However, if it is above the threshold, no amount of behavioral adaptations can prevent the epidemic. Our analyses suggest that the interaction patterns of the infected population play a major role in sustaining the epidemic. Our results have implications on epidemic containment policies, as awareness campaigns and human behavioral responses can be effective only if the interaction levels of the infected populace are kept in check.

Environmental Factors Influencing Epidemic Cholera

Science.gov (United States)

Jutla, Antarpreet; Whitcombe, Elizabeth; Hasan, Nur; Haley, Bradd; Akanda, Ali; Huq, Anwar; Alam, Munir; Sack, R. Bradley; Colwell, Rita

2013-01-01

Cholera outbreak following the earthquake of 2010 in Haiti has reaffirmed that the disease is a major public health threat. Vibrio cholerae is autochthonous to aquatic environment, hence, it cannot be eradicated but hydroclimatology-based prediction and prevention is an achievable goal. Using data from the 1800s, we describe uniqueness in seasonality and mechanism of occurrence of cholera in the epidemic regions of Asia and Latin America. Epidemic regions are located near regional rivers and are characterized by sporadic outbreaks, which are likely to be initiated during episodes of prevailing warm air temperature with low river flows, creating favorable environmental conditions for growth of cholera bacteria. Heavy rainfall, through inundation or breakdown of sanitary infrastructure, accelerates interaction between contaminated water and human activities, resulting in an epidemic. This causal mechanism is markedly different from endemic cholera where tidal intrusion of seawater carrying bacteria from estuary to inland regions, results in outbreaks. PMID:23897993

Effects of local and global network connectivity on synergistic epidemics

Science.gov (United States)

Broder-Rodgers, David; Pérez-Reche, Francisco J.; Taraskin, Sergei N.

2015-12-01

Epidemics in networks can be affected by cooperation in transmission of infection and also connectivity between nodes. An interplay between these two properties and their influence on epidemic spread are addressed in the paper. A particular type of cooperative effects (called synergy effects) is considered, where the transmission rate between a pair of nodes depends on the number of infected neighbors. The connectivity effects are studied by constructing networks of different topology, starting with lattices with only local connectivity and then with networks that have both local and global connectivity obtained by random bond-rewiring to nodes within a certain distance. The susceptible-infected-removed epidemics were found to exhibit several interesting effects: (i) for epidemics with strong constructive synergy spreading in networks with high local connectivity, the bond rewiring has a negative role in epidemic spread, i.e., it reduces invasion probability; (ii) in contrast, for epidemics with destructive or weak constructive synergy spreading on networks of arbitrary local connectivity, rewiring helps epidemics to spread; (iii) and, finally, rewiring always enhances the spread of epidemics, independent of synergy, if the local connectivity is low.

Viking telecommunication effects of GEOS satellite interference based on testing at the Madrid deep space station

Science.gov (United States)

Stuhr, F. V.; Kent, S. S.; Galvez, J. L.; Luaces, B. G.; Pasero, G. R.; Urech, J. M.

1976-01-01

In support of the ongoing NASA-European Space Agency (ESA) effort to understand and control possible interference between missions, testing was conducted at the Madrid Deep Space Station from July 1975 to February 1976 to characterize the effect on Viking 1975 telecommunication link performance of Geodetic Earth-Orbiting Satellite (GEOS) downlink signals. The prime use of the data was to develop a capability to predict GEOS interference effects for evaluation of Viking 1975 mission impacts and possible temporary GEOS shutdown. Also, the data would serve as a basis for assessment of the GEOS impact on missions other than Viking as well as for more general interference applications. Performances of the reference receiver, telemetry, and planetary ranging were measured in the presence of various types of GEOS-related interference, including an unmodulated GEOS carrier and simulation of the actual spectrum by an ESA-supplied GEOS suitcase model.

Untangling the Interplay between Epidemic Spread and Transmission Network Dynamics.

Directory of Open Access Journals (Sweden)

Christel Kamp

Full Text Available The epidemic spread of infectious diseases is ubiquitous and often has a considerable impact on public health and economic wealth. The large variability in the spatio-temporal patterns of epidemics prohibits simple interventions and requires a detailed analysis of each epidemic with respect to its infectious agent and the corresponding routes of transmission. To facilitate this analysis, we introduce a mathematical framework which links epidemic patterns to the topology and dynamics of the underlying transmission network. The evolution, both in disease prevalence and transmission network topology, is derived from a closed set of partial differential equations for infections without allowing for recovery. The predictions are in excellent agreement with complementarily conducted agent-based simulations. The capacity of this new method is demonstrated in several case studies on HIV epidemics in synthetic populations: it allows us to monitor the evolution of contact behavior among healthy and infected individuals and the contributions of different disease stages to the spreading of the epidemic. This gives both direction to and a test bed for targeted intervention strategies for epidemic control. In conclusion, this mathematical framework provides a capable toolbox for the analysis of epidemics from first principles. This allows for fast, in silico modeling--and manipulation--of epidemics and is especially powerful if complemented with adequate empirical data for parameterization.

Fundamental Limitations for Imaging GEO Satellites

Science.gov (United States)

2015-10-18

Fundamental limitations for imaging GEO satellites D. Mozurkewich Seabrook Engineering , Seabrook, MD 20706 USA H. R. Schmitt, J. T. Armstrong Naval...higher spatial frequency. Send correspondence to David Mozurkewich, Seabrook Engineering , 9310 Dubarry Ave., Seabrook MD 20706 E-mail: dave

Abia State HIV epidemic and response: challenges and prospects.

Science.gov (United States)

Onyeonoro, Ugochukwu Uchenna; Emelumadu, Obiageli Fidelia; Nwamoh, Uche Ngozi; Ukegbu, Andrew Ugwunna; Okafor, Godwin Oc

2014-11-13

Since the first seroprevalence survey in 1999, the HIV prevalence in Abia State has increased from 1.8% to 7.3% in 2010. The state is currently experiencing a generalized epidemic, with most transmission occurring through heterosexual low-risk sex. Drivers of the epidemic include low knowledge of HIV prevention, low risk perception, predominantly male factor-driven risky sexual behavior, and low condom use. This study reviewed the state HIV epidemic trend in relation to response, sought to identify the gaps between the epidemic and response, and recommended measures to strengthen the state response.

Optimal Control of Interdependent Epidemics in Complex Networks

OpenAIRE

Chen, Juntao; Zhang, Rui; Zhu, Quanyan

2017-01-01

Optimal control of interdependent epidemics spreading over complex networks is a critical issue. We first establish a framework to capture the coupling between two epidemics, and then analyze the system's equilibrium states by categorizing them into three classes, and deriving their stability conditions. The designed control strategy globally optimizes the trade-off between the control cost and the severity of epidemics in the network. A gradient descent algorithm based on a fixed point itera...

Influence of ZnO encapsulation on the luminescence property of GeO2 nanowires

International Nuclear Information System (INIS)

Kim, Hyunsu; Jin, Changhyun; Park, Sunghoon; Lee, Chongmu; Kwon, Youngjae; Lee, Sangmin

2012-01-01

GeO 2 -core/ZnO-shell nanowires were synthesized on (100) Si substrates by thermal evaporation of Ge powders, followed by atomic layer deposition of ZnO. X-ray diffraction, scanning electron microscopy and transmission electron microscopy analyses showed that the mean diameter and lengths of the core-shell nanowires were approximately 100 nm and from a few tens to a few hundreds of micrometers, respectively. Photoluminescence measurements showed that pure GeO 2 nanowires had a violet emission band centered at approximately 430 nm. In contrast, GeO 2 -core/ZnO-shell nanowires had both a sharp near-band edge (NBE) emission band centered at approximately 380 nm and a broad deep-level (DL) emission band centered at approximately 590 nm, which is characteristic of ZnO. GeO 2 -core/ZnO-shell nanowires showed a higher intensity ratio of NBE emission to DL emission than either GeO 2 or ZnO nanowires. In addition, the origin of the enhancement of luminescence in GeO 2 nanowires by ZnO encapsulation is discussed.

Percolation and epidemics in random clustered networks

Science.gov (United States)

Miller, Joel C.

2009-08-01

The social networks that infectious diseases spread along are typically clustered. Because of the close relation between percolation and epidemic spread, the behavior of percolation in such networks gives insight into infectious disease dynamics. A number of authors have studied percolation or epidemics in clustered networks, but the networks often contain preferential contacts in high degree nodes. We introduce a class of random clustered networks and a class of random unclustered networks with the same preferential mixing. Percolation in the clustered networks reduces the component sizes and increases the epidemic threshold compared to the unclustered networks.

Predicting extinction rates in stochastic epidemic models

International Nuclear Information System (INIS)

Schwartz, Ira B; Billings, Lora; Dykman, Mark; Landsman, Alexandra

2009-01-01

We investigate the stochastic extinction processes in a class of epidemic models. Motivated by the process of natural disease extinction in epidemics, we examine the rate of extinction as a function of disease spread. We show that the effective entropic barrier for extinction in a susceptible–infected–susceptible epidemic model displays scaling with the distance to the bifurcation point, with an unusual critical exponent. We make a direct comparison between predictions and numerical simulations. We also consider the effect of non-Gaussian vaccine schedules, and show numerically how the extinction process may be enhanced when the vaccine schedules are Poisson distributed

GeoSciML v3.0 - a significant upgrade of the CGI-IUGS geoscience data model

Science.gov (United States)

Raymond, O.; Duclaux, G.; Boisvert, E.; Cipolloni, C.; Cox, S.; Laxton, J.; Letourneau, F.; Richard, S.; Ritchie, A.; Sen, M.; Serrano, J.-J.; Simons, B.; Vuollo, J.

2012-04-01

GeoSciML version 3.0 (http://www.geosciml.org), released in late 2011, is the latest version of the CGI-IUGS* Interoperability Working Group geoscience data interchange standard. The new version is a significant upgrade and refactoring of GeoSciML v2 which was released in 2008. GeoSciML v3 has already been adopted by several major international interoperability initiatives, including OneGeology, the EU INSPIRE program, and the US Geoscience Information Network, as their standard data exchange format for geoscience data. GeoSciML v3 makes use of recently upgraded versions of several Open Geospatial Consortium (OGC) and ISO data transfer standards, including GML v3.2, SWE Common v2.0, and Observations and Measurements v2 (ISO 19156). The GeoSciML v3 data model has been refactored from a single large application schema with many packages, into a number of smaller, but related, application schema modules with individual namespaces. This refactoring allows the use and future development of modules of GeoSciML (eg; GeologicUnit, GeologicStructure, GeologicAge, Borehole) in smaller, more manageable units. As a result of this refactoring and the integration with new OGC and ISO standards, GeoSciML v3 is not backwardly compatible with previous GeoSciML versions. The scope of GeoSciML has been extended in version 3.0 to include new models for geomorphological data (a Geomorphology application schema), and for geological specimens, geochronological interpretations, and metadata for geochemical and geochronological analyses (a LaboratoryAnalysis-Specimen application schema). In addition, there is better support for borehole data, and the PhysicalProperties model now supports a wider range of petrophysical measurements. The previously used CGI_Value data type has been superseded in favour of externally governed data types provided by OGC's SWE Common v2 and GML v3.2 data standards. The GeoSciML v3 release includes worked examples of best practice in delivering geochemical

Toward a generalized theory of epidemic awareness in social networks

Science.gov (United States)

Wu, Qingchu; Zhu, Wenfang

We discuss the dynamics of a susceptible-infected-susceptible (SIS) model with local awareness in networks. Individual awareness to the infectious disease is characterized by a general function of epidemic information in its neighborhood. We build a high-accuracy approximate equation governing the spreading dynamics and derive an approximate epidemic threshold above which the epidemic spreads over the whole network. Our results extend the previous work and show that the epidemic threshold is dependent on the awareness function in terms of one infectious neighbor. Interestingly, when a pow-law awareness function is chosen, the epidemic threshold can emerge in infinite networks.

Learning fraction comparison by using a dynamic mathematics software - GeoGebra

Science.gov (United States)

Poon, Kin Keung

2018-04-01

GeoGebra is a mathematics software system that can serve as a tool for inquiry-based learning. This paper deals with the application of a fraction comparison software, which is constructed by GeoGebra, for use in a dynamic mathematics environment. The corresponding teaching and learning issues have also been discussed.

Learning Fraction Comparison by Using a Dynamic Mathematics Software--GeoGebra

Science.gov (United States)

Poon, Kin Keung

2018-01-01

GeoGebra is a mathematics software system that can serve as a tool for inquiry-based learning. This paper deals with the application of a fraction comparison software, which is constructed by GeoGebra, for use in a dynamic mathematics environment. The corresponding teaching and learning issues have also been discussed.

Constructions, geo-materials and interactions

International Nuclear Information System (INIS)

Petit, C.; Pijaudier-Cabot, G.; Reynouard, J.M.

1998-01-01

The development of methods for the evaluation of the functioning safety of buildings and structures during all their service life represents one of the major research goals in civil engineering. The energy production, the industrial development and the management of wastes have led to new safety research problems to ensure the environment and populations protection. The mechanics of geo-materials (soils, concretes, rocks) is the central part of the predictive tools developed to satisfy these socio-economical stakes. The functioning analysis of buildings cover huge size and time scales, from the micro-meter to the kilometer and from the second to the century, and requires various relevant models and multi-subject methods. This volume is divided in 3 parts dealing with: the in-service safety of buildings, the accidental situations, and the behaviour of geo-materials. Five papers dealing with the long-term, seismic and thermal behaviour of concretes were selected for INIS and one paper dealing with the effect of time on a natural clay and on the behaviour of a dam foundations was selected for ETDE. (J.S.)

GeoInquiries: Addressing a Grand Challenge for Teaching with GIS in Schools

Science.gov (United States)

DiBiase, D.; Baker, T.

2016-12-01

According to the National Research Council (2006), geographic information systems (GIS) is a powerful tool for expanding students' abilities to think spatially, a critical skill for future STEM professionals. However, educators in mainstream subjects in U.S. education have struggled for decades to use GIS effectively in classrooms. GeoInquiries are no cost, standards-based (NGSS or AP), Creative Commons-licensed instructional activities that guide inquiry around map-based concepts found in key subjects like Earth and environmental science. Web maps developed for GeoInquiries expand upon printed maps in leading textbooks by taking advantage of 21st GIS capabilities. GeoInquiry collections consist of 15 activities, each chosen to offer a map-based activity every few weeks throughout the school year. GeoInquiries use a common inquiry instructional framework, learned by many educators during their teacher preparation coursework. GeoInquiries are instructionally flexible - acting as much like building blocks for crafting custom activities as finished instructional materials. Over a half million geoinquiries will be accessed in the next twelve months - serving an anticipated 15 million students. After a generation of outreach to the educators, GIS is finally finding its way the mainstream.

Suppressing traffic-driven epidemic spreading by adaptive routing strategy

International Nuclear Information System (INIS)

Yang, Han-Xin; Wang, Zhen

2016-01-01

The design of routing strategies for traffic-driven epidemic spreading has received increasing attention in recent years. In this paper, we propose an adaptive routing strategy that incorporates topological distance with local epidemic information through a tunable parameter h. In the case where the traffic is free of congestion, there exists an optimal value of routing parameter h, leading to the maximal epidemic threshold. This means that epidemic spreading can be more effectively controlled by adaptive routing, compared to that of the static shortest path routing scheme. Besides, we find that the optimal value of h can greatly relieve the traffic congestion in the case of finite node-delivering capacity. We expect our work to provide new insights into the effects of dynamic routings on traffic-driven epidemic spreading.

Teaching helix and problems connected with helix using GeoGebra

Science.gov (United States)

Bímová, Daniela

2017-12-01

The contribution presents the dynamic applets created in GeoGebra that show the origin and main properties of a helix and it also presents some constructive problems connected with the helix. There are created the step by step algorithms of some constructions in the chosen applets. Three-dimensional applets include illustrative helix samples and spatial animations that help students better see problems concerning the helix spatially. There is mentioned the website in the contribution on which there is situated GeoGebra book dedicated to the topic "Helix" and containing the mentioned applets. The created applets and materials of the GeoGebra book "Helix" help in teaching and studying the course Constructive Geometry determined for the students of the Faculty of Mechanical Engineering of the Technical University of Liberec.

Model driven geo-information systems development

NARCIS (Netherlands)

Morales Guarin, J.M.; Ferreira Pires, Luis; van Sinderen, Marten J.; Williams, A.D.

Continuous change of user requirements has become a constant for geo-information systems. Designing systems that can adapt to such changes requires an appropriate design methodology that supports abstraction, modularity and other mechanisms to capture the essence of the system and help controlling

Epidemic dynamics and endemic states in complex networks

OpenAIRE

Pastor-Satorras, Romualdo; Vespignani, Alessandro

2001-01-01

We study by analytical methods and large scale simulations a dynamical model for the spreading of epidemics in complex networks. In networks with exponentially bounded connectivity we recover the usual epidemic behavior with a threshold defining a critical point below which the infection prevalence is null. On the contrary, on a wide range of scale-free networks we observe the absence of an epidemic threshold and its associated critical behavior. This implies that scale-free networks are pron...

Stemming the obesity epidemic : a tantalizing prospect

NARCIS (Netherlands)

Veerman, J Lennert; Barendregt, Jan J; van Beeck, Ed F; Seidell, Jacob C; Mackenbach, Johan P

OBJECTIVE: Obesity is a growing problem worldwide, but there are no good methods to assess the future course of the epidemic and the potential influence of interventions. We explore the behavior change needed to stop the obesity epidemic in the U.S. RESEARCH METHODS AND PROCEDURES: We modeled the

GeoMel Technologies. Providing technology solutions to environmental hazardous waste problems

International Nuclear Information System (INIS)

2003-01-01

AMEC's GeoMelt technologies offer a unique and highly effective means of destroying organic pollutants while permanently immobilizing radioactive contaminants and heavy metals. The GeoMelt technologies use electricity to melt contaminated soil and waste at temperatures that can reach 2,000 deg. C (3,600 degrees Fahrenheit). The process destroys organic contaminants through pyrolysis and catalytic reactions, while permanently immobilizing hazardous inorganic contaminants and radionuclides in a glassy, rock-like mass. The obsidian-like mass produced by GeoMelt is 10 times stronger than concrete, effectively safeguarding groundwater from contamination for tens of thousands of years. The vitrified mass is unaffected by wet/dry and freeze/thaw cycles and is unsurpassed in leach resistance. Corrosion tests have shown that the GeoMelt product is more durable than granite or marble. Almost Anywhere and Almost Everything GeoMelt equipment is easily transported to site by truck and can be used for in-situ treatment or in an above-ground batch plant. The process accommodates a wide range of mixed wastes and debris, which minimizes the need for handling, sorting and size-reduction activities. Virtually all types of debris can be accommodated, including drums, scrap metal, concrete, boulders, asphalt, wood, tires and plastic. All classes of contaminants are treated by the process, including organics, heavy metals and radioactive materials. GeoMelt has been used to successfully treat a wide range of contaminants, including polychlorinated biphenyls (PCBs), dioxines, pesticides, herbicides, mixed transuranics (TRUs), and a variety of heavy metals. The U.S. Department of Energy spent hundreds of millions of dollars developing vitrification processes for its waste treatment and site remediation needs. The GeoMelt process, originally developed for the DOE by Battelle Memorial Institute, was one result of this undertaking. The process already has been used to treat more than 25

Thermo-msf-parser: an open source Java library to parse and visualize Thermo Proteome Discoverer msf files.

Science.gov (United States)

Colaert, Niklaas; Barsnes, Harald; Vaudel, Marc; Helsens, Kenny; Timmerman, Evy; Sickmann, Albert; Gevaert, Kris; Martens, Lennart

2011-08-05

The Thermo Proteome Discoverer program integrates both peptide identification and quantification into a single workflow for peptide-centric proteomics. Furthermore, its close integration with Thermo mass spectrometers has made it increasingly popular in the field. Here, we present a Java library to parse the msf files that constitute the output of Proteome Discoverer. The parser is also implemented as a graphical user interface allowing convenient access to the information found in the msf files, and in Rover, a program to analyze and validate quantitative proteomics information. All code, binaries, and documentation is freely available at http://thermo-msf-parser.googlecode.com.

Geo-scientific database for research and development purposes

International Nuclear Information System (INIS)

Tabani, P.; Mangeot, A.; Crabol, V.; Delage, P.; Dewonck, S.; Auriere, C.

2012-01-01

Document available in extended abstract form only. The Research and Development Division must manage, secure and reliable manner, a large number of data from scientific disciplines and diverse means of acquisition (observations, measurements, experiments, etc.). This management is particularly important for the Underground research Laboratory, the source of many recording continuous measurements. Thus, from its conception, Andra has implemented two management tools of scientific information, the 'Acquisition System and Data Management' [SAGD] and GEO database with its associated applications. Beyond its own needs, Andra wants to share its achievements with the scientific community, and it therefore provides the data stored in its databases or samples of rock or water when they are available. Acquisition and Data Management (SAGD) This system manages data from sensors installed at several sites. Some sites are on the surface (piezometric, atmospheric and environmental stations), the other are in the Underground Research Laboratory. This system also incorporates data from experiments in which Andra participates in Mont Terri Laboratory in Switzerland. S.A.G.D fulfils these objectives by: - Make available in real time on a single system, with scientists from Andra but also different partners or providers who need it, all experimental data from measurement points - Displaying the recorded data on temporal windows and specific time step, - Allowing remote control of the experimentations, - Ensuring the traceability of all recorded information, - Ensuring data storage in a data base. S.A.G.D has been deployed in the first experimental drift at -445 m in November 2004. It was subsequently extended to the underground Mont Terri laboratory in Switzerland in 2005, to the entire surface logging network of the Meuse / Haute-Marne Center in 2008 and to the environmental network in 2011. All information is acquired, stored and manage by a software called Geoscope. This software

Evaluating Subcriticality during the Ebola Epidemic in West Africa.

Directory of Open Access Journals (Sweden)

Wayne T A Enanoria

Full Text Available The 2014-2015 Ebola outbreak is the largest and most widespread to date. In order to estimate ongoing transmission in the affected countries, we estimated the weekly average number of secondary cases caused by one individual infected with Ebola throughout the infectious period for each affected West African country using a stochastic hidden Markov model fitted to case data from the World Health Organization. If the average number of infections caused by one Ebola infection is less than 1.0, the epidemic is subcritical and cannot sustain itself. The epidemics in Liberia and Sierra Leone have approached subcriticality at some point during the epidemic; the epidemic in Guinea is ongoing with no evidence that it is subcritical. Response efforts to control the epidemic should continue in order to eliminate Ebola cases in West Africa.

Surface Pressure Dependencies in the GEOS-Chem-Adjoint System and the Impact of the GEOS-5 Surface Pressure on CO2 Model Forecast

Science.gov (United States)

Lee, Meemong; Weidner, Richard

2016-01-01

In the GEOS-Chem Adjoint (GCA) system, the total (wet) surface pressure of the GEOS meteorology is employed as dry surface pressure, ignoring the presence of water vapor. The Jet Propulsion Laboratory (JPL) Carbon Monitoring System (CMS) research team has been evaluating the impact of the above discrepancy on the CO2 model forecast and the CO2 flux inversion. The JPL CMS research utilizes a multi-mission assimilation framework developed by the Multi-Mission Observation Operator (M2O2) research team at JPL extending the GCA system. The GCA-M2O2 framework facilitates mission-generic 3D and 4D-variational assimilations streamlining the interfaces to the satellite data products and prior emission inventories. The GCA-M2O2 framework currently integrates the GCA system version 35h and provides a dry surface pressure setup to allow the CO2 model forecast to be performed with the GEOS-5 surface pressure directly or after converting it to dry surface pressure.

The Global Invasive Species Information Network: contributing to GEO Task BI-07-01b

Science.gov (United States)

Graham, J.; Morisette, J. T.; Simpson, A.

2009-12-01

Invasive alien species (IAS) threaten biodiversity and exert a tremendous cost on society for IAS prevention and eradication. They endanger natural ecosystem functioning and seriously impact biodiversity and agricultural production. The task definition for the GEO task BI-07-01b: Invasive Species Monitoring System is to characterize, monitor, and predict changes in the distribution of invasive species. This includes characterizing the current requirements and capacity for invasive species monitoring and developing strategies for implementing cross-search functionality among existing online invasive species information systems from around the globe. The Task is being coordinated by members of the Global Invasive Species Information Network (GISIN) and their partners. Information on GISIN and a prototype of the network is available at www.gisin.org. This talk will report on the current status of GISIN and review how researchers can either contribute to or utilize data from this network.

Could the Recent Zika Epidemic Have Been Predicted?

Science.gov (United States)

Vecchi, G. A.; Munoz, A. G.; Thomson, M. C.; Stewart-Ibarra, A. M.; Chourio, X.; Nájera, P.; Moran, Z.; Yang, X.

2017-12-01

Given knowledge at the time, the recent 2015-2016 zika virus (ZIKV) epidemic probably could not have been predicted. Without the prior knowledge of ZIKV being already present in South America, and given the lack of understanding of key epidemiologic processes and long-term records of ZIKV cases in the continent, the best related prediction could be carried out for the potential risk of a generic Aedes-borne disease epidemic. Here we use a recently published two-vector basic reproduction number model to assess the predictability of the conditions conducive to epidemics of diseases like zika, chikungunya, or dengue, transmitted by the independent or concurrent presence of Aedes aegypti and Aedes albopictus. We compare the potential risk of transmission forcing the model with the observed climate and with state-of-the-art operational forecasts from the North American Multi Model Ensemble (NMME), finding that the predictive skill of this new seasonal forecast system is highest for multiple countries in Latin America and the Caribbean during the December-February and March-May seasons, and slightly lower—but still of potential use to decision-makers—for the rest of the year. In particular, we find that above-normal suitable conditions for the occurrence of the zika epidemic at the beginning of 2015 could have been successfully predicted at least 1 month in advance for several zika hotspots, and in particular for Northeast Brazil: the heart of the epidemic. Nonetheless, the initiation and spread of an epidemic depends on the effect of multiple factors beyond climate conditions, and thus this type of approach must be considered as a guide and not as a formal predictive tool of vector-borne epidemics.

Study on Zero-Doppler Centroid Control for GEO SAR Ground Observation

Directory of Open Access Journals (Sweden)

Yicheng Jiang

2014-01-01

Full Text Available In geosynchronous Earth orbit SAR (GEO SAR, Doppler centroid compensation is a key step for imaging process, which could be performed by the attitude steering of a satellite platform. However, this zero-Doppler centroid control method does not work well when the look angle of radar is out of an expected range. This paper primarily analyzes the Doppler properties of GEO SAR in the Earth rectangular coordinate. Then, according to the actual conditions of the GEO SAR ground observation, the effective range is presented by the minimum and maximum possible look angles which are directly related to the orbital parameters. Based on the vector analysis, a new approach for zero-Doppler centroid control in GEO SAR, performing the attitude steering by a combination of pitch and roll rotation, is put forward. This approach, considering the Earth’s rotation and elliptical orbit effects, can accurately reduce the residual Doppler centroid. All the simulation results verify the correctness of the range of look angle and the proposed steering method.

Geostationary Coastal and Air Pollution Events (GeoCAPE) Filter Radiometer (FR)

Science.gov (United States)

Kotecki, Carl; Chu, Martha; Wilson, Mark; Clark, Mike; Nanan, Bobby; Matson, Liz; McBirney, Dick; Smith, Jay; Earle, Paul; Choi, Mike;

Grammar-Based Specification and Parsing of Binary File Formats

Directory of Open Access Journals (Sweden)

William Underwood

2012-03-01

Full Text Available The capability to validate and view or play binary file formats, as well as to convert binary file formats to standard or current file formats, is critically important to the preservation of digital data and records. This paper describes the extension of context-free grammars from strings to binary files. Binary files are arrays of data types, such as long and short integers, floating-point numbers and pointers, as well as characters. The concept of an attribute grammar is extended to these context-free array grammars. This attribute grammar has been used to define a number of chunk-based and directory-based binary file formats. A parser generator has been used with some of these grammars to generate syntax checkers (recognizers for validating binary file formats. Among the potential benefits of an attribute grammar-based approach to specification and parsing of binary file formats is that attribute grammars not only support format validation, but support generation of error messages during validation of format, validation of semantic constraints, attribute value extraction (characterization, generation of viewers or players for file formats, and conversion to current or standard file formats. The significance of these results is that with these extensions to core computer science concepts, traditional parser/compiler technologies can potentially be used as a part of a general, cost effective curation strategy for binary file formats.

Geo-environmental mapping tool applied to pipeline design

Energy Technology Data Exchange (ETDEWEB)

Andrade, Karina de S.; Calle, Jose A.; Gil, Euzebio J. [Geomecanica S/A Tecnologia de Solo Rochas e Materiais, Rio de Janeiro, RJ (Brazil); Sare, Alexandre R. [Geomechanics International Inc., Houston, TX (United States); Soares, Ana Cecilia [PETROBRAS S.A., Rio de Janeiro, RJ (Brazil)

2009-07-01

The Geo-Environmental Mapping is an improvement of the Geological-Geotechnical Mapping used for basic pipeline designs. The main purpose is to assembly the environmental, geotechnical and geological concepts in a methodological tool capable to predict constrains and reduce the pipeline impact to the environment. The Geo-Environmental mapping was built to stress the influence of soil/structure interaction, related to the physical effect that comes from the contact between structures and soil or rock. A Geological-Geotechnical-Environmental strip (chart) was presented to emphasize the pipeline operational constrains and its influence to the environment. The mapping was developed to clearly show the occurrence and properties of geological materials divided into geotechnical domain units (zones). The strips present construction natural properties, such as: excavability, stability of the excavation and soil re-use capability. Also, the environmental constrains were added to the geological-geotechnical mapping. The Geo-Environmental Mapping model helps the planning of the geotechnical and environmental inquiries to be carried out during executive design, the discussion on the types of equipment to be employed during construction and the analysis of the geological risks and environmental impacts to be faced during the built of the pipeline. (author)

Long afterglow properties of Eu2+/Mn2+ doped Zn2GeO4

International Nuclear Information System (INIS)

Wan, Minhua; Wang, Yinhai; Wang, Xiansheng; Zhao, Hui; Li, Hailing; Wang, Cheng

2014-01-01

Zn 2 GeO 4 :Eu 2+ 0.01 and Zn 2 GeO 4 :Mn 2+ 0.01 long afterglow phosphors were synthesized via a high temperature solid state reaction. X-ray diffraction (XRD), afterglow spectra, decay curves and thermoluminescence curves were utilized to characterize the samples. The X-ray diffraction phases indicate that the doping of small amount of transition metal ions or rare earth ions has no significant influence on the crystal structure of Zn 2 GeO 4 . According to the afterglow spectra, we found that the Zn 2 GeO 4 :Eu 2+ 0.01 exhibits a broad band emission with a peak at 474 nm, which could be ascribed to Eu 2+ transition between 4f 6 5d 1 and 4f 7 electron configurations. The Zn 2 GeO 4 :Mn 2+ 0.01 shows a narrow band emission peaking at 532 nm corresponding to the characteristic transition of Mn 2+ ( 4 T 1 → 6 A 1 ). The thermoluminescence (TL) curves above room temperature are employed for the discussion of the origin of the traps and the mechanism of the persistent luminescence. The results indicate that Zn 2 GeO 4 may be an excellent host material for the rare earth ions or transition metal ions long afterglows. -- Highlights: • Zn 2 GeO 4 :Eu 2+ 0.01 and Zn 2 GeO 4 :Mn 2+ 0.01 long afterglow phosphors were synthesized. • Found that these phosphors possess a persistent luminescence property. • The long afterglow spectra were measured. • Found that these phosphors possess a trap level by thermoluminescence

High-pressure EXAFS study of vitreous GeO2 up to 44 GPa

International Nuclear Information System (INIS)

Baldini, M.; Aquilanti, G.; Mao, H-k.; Yang, W.; Shen, G.; Pascarelli, S.; Mao, W. L.

2010-01-01

High-pressure extended x-ray absorption fine-structure measurements were performed on amorphous GeO 2 over increasing and decreasing pressure cycles at pressures up to 44 GPa. Several structural models based on crystalline phases with fourfold, fivefold, and sixfold coordination were used to fit the Ge-O first shell. The Ge-O bond lengths gradually increased up to 30 GPa. Three different pressure regimes were identified in the pressure evolution of the Ge-O bond distances. Below 13 GPa, the local structure was well described by a fourfold 'quartzlike' model whereas a disordered region formed by a mixture of four- and five-coordinated germanium-centered polyhedra was observed in the intermediate pressure range between 13 and 30 GPa. Above 30 GPa the structural transition to the maximum coordination could be considered complete. The present results shed light on the GeO 2 densification process and on the nature of the amorphous-amorphous transition, suggesting that the transition is more gradual and continuous than what has been previously reported.

Emerging trends in geospatial artificial intelligence (geoAI): potential applications for environmental epidemiology.

Science.gov (United States)

VoPham, Trang; Hart, Jaime E; Laden, Francine; Chiang, Yao-Yi

2018-04-17

Geospatial artificial intelligence (geoAI) is an emerging scientific discipline that combines innovations in spatial science, artificial intelligence methods in machine learning (e.g., deep learning), data mining, and high-performance computing to extract knowledge from spatial big data. In environmental epidemiology, exposure modeling is a commonly used approach to conduct exposure assessment to determine the distribution of exposures in study populations. geoAI technologies provide important advantages for exposure modeling in environmental epidemiology, including the ability to incorporate large amounts of big spatial and temporal data in a variety of formats; computational efficiency; flexibility in algorithms and workflows to accommodate relevant characteristics of spatial (environmental) processes including spatial nonstationarity; and scalability to model other environmental exposures across different geographic areas. The objectives of this commentary are to provide an overview of key concepts surrounding the evolving and interdisciplinary field of geoAI including spatial data science, machine learning, deep learning, and data mining; recent geoAI applications in research; and potential future directions for geoAI in environmental epidemiology.

Effect of aging and alkali activator on the porous structure of a geo-polymer

International Nuclear Information System (INIS)

Steins, Prune; Poulesquen, Arnaud; Frizon, Fabien; Lambertin, David; Jestin, Jacques; Rossignol, Sylvie

2014-01-01

Nitrogen sorption and small- and wide-angle X-ray and neutron scattering techniques were used to study the porous structure of geo-polymers, inorganic polymers synthesized by reaction of a strongly alkaline solution and an aluminosilicate source (metakaolin). The effects of aging and the use of alkali activators (Na"+, K"+) of different sizes were investigated at room temperature. The influence of aging time on the microstructure of both geo-polymer matrixes was verified in terms of pore volume and specific surface area. The results suggested a refinement of the porosity and therefore a reduction in the pore volume over time. Regardless of the age considered, some characteristics of the porous network such as pore size, shape and distribution depend on the alkali activator used. Whatever the technique considered, the potassium geo-polymer has a greater specific surface area than the sodium geo-polymer. According to the scattering results, the refinement of the porosity can be associated with, first, a densification of the solid network and, secondly, a partial closure of the porosity at the nanometer scale. The kinetics are much slower for the sodium geo-polymer than for the potassium geo-polymer in the six months of observation. (authors)

MGDS: Free, on-line, cutting-edge tools to enable the democratisation of geoscience data

Science.gov (United States)

Goodwillie, A. M.; Ryan, W. B.; O'Hara, S.; Ferrini, V.; Arko, R. A.; Coplan, J.; Chan, S.; Carbotte, S. M.; Nitsche, F. O.; Bonczkowski, J.; Morton, J. J.; Weissel, R.; Leung, A.

2010-12-01

The availability of user-friendly, effective cyber-information resources for accessing and manipulating geoscience data has grown rapidly in recent years. Based at Lamont-Doherty Earth Observatory the MGDS group has developed a number of free tools that have wide application across the geosciences for both educators and researchers. A simple web page (http://www.marine-geo.org/) allows users to search for and download many types of data by key word, geographical region, or published citation. The popular Create Maps and Grids function and the downloadable Google Earth-compatible KML files appeal to a wide user base. MGDS MediaBank galleries (http://media.marine-geo.org/) enable users to view and download compelling images that are purposefully selected for their educational value from NSF-funded field programs. GeoMapApp (http://www.geomapapp.org), a free map-based interactive tool that works on any machine, is increasingly being adopted across a broad suite of users from middle school students to university researchers. GeoMapApp allows users to plot, manipulate and present data in an intuitive geographical reference frame. GeoMapApp offers a convenient way to explore the wide range of built-in data sets, to quickly generate maps and images that aid visualisation and, when importing their own gridded and tabular data sets, to access the same rich built-in functionality. A user guide, short multi-media tutorials, and webinar are available on-line. The regularly-updated Global Multi-Resolution Topography (GMRT) Synthesis is used as the default GeoMapApp base map and is an increasingly popular means to rapidly create location maps. Additionally, the layer manager offers a fast way to overlay and compare multiple data sets and is augmented by the ability to alter layer transparency so that underlying layers become visible. Examples of GeoMapApp built-in data sets include high-resolution land topography and ocean floor bathymetry derived from satellite and multi

Systemic determinants of modern gravitational processes in the geo-economic space

Directory of Open Access Journals (Sweden)

Zoryana Lutsyshyn

2015-12-01

Full Text Available From the compositional point of view, research on this topic has revealed two main directions: (1 an analysis of global development asymmetry that has activated gravitational processes in geo-economic space; and (2 a direction that focuses on the profound study of the causes for heterogeneity in geo-economic space and divergence in global development under the influence of gravitational factors of nature on the endogenousexogenous axis. Systemic determinants of gravitational processes are revealed in geo- economic space and the asymmetry of global activate ravitional processes in geo-economic space are observed, and methodological interconnectedness coinfluence of two complementary determinants of global development – convergence and divergence and the contradiction between them are examined, which at the same time underlie the inevitable internal contradictions of the process, creating conditions for further configuration of the «new globalization community», which is built on the principles of nonlinear dynamics and logic gravitational processes in geo-economic space.Taking into account the relevant uncertainties, the attention is focused on the isolation of several myths around which the debate that has important methodological significance in the context of the current global inter-system transformations is held. Geostrategic matrix divergence of global development is produced,which is based on techniques which incorporated cluster analysisthat are built on linguistic variables and integrated analysis of the key trends of country and global development geostrategic position of Ukraine in geo-economic space in the projection on the issues of global inter-system transformations isoutlined .It is proved that the level of gravity load increases in the deepening of the global asymmetries , and that the current global transformation is not yet complete, and polycentric new architecture geospace is not formed. In the near future we should

Geo-Spatial Social Network Analysis of Social Media to Mitigate Disasters

Science.gov (United States)

Carley, K. M.

2017-12-01

Understanding the spatial layout of human activity can afford a better understanding many phenomena - such as local cultural, the spread of ideas, and the scope of a disaster. Today, social media is one of the key sensors for acquiring information on socio-cultural activity, some with cues as to the geo-location. We ask, What can be learned by putting such data on maps? For example, are people who chat on line more likely to be near each other? Can Twitter data support disaster planning or early warning? In this talk, such issues are examined using data collected via Twitter and analyzed using ORA. ORA is a network analysis and visualization system. It supports not just social networks (who is interacting with whom), but also high dimensional networks with many types of nodes (e.g. people, organizations, resources, activities …) and relations, geo-spatial network analysis, dynamic network analysis, & geo-temporal analysis. Using ORA lessons learned from five case studies are considered: Arab Spring, Tsunami warning in Padang Indonesia, Twitter around Fukushima in Japan, Typhoon Haiyan (Yolanda), & regional conflict. Using Padang Indonesia data, we characterize the strengths and limitations of social media data to support disaster planning & early warning, identify at risk areas & issues of concern, and estimate where people are and which areas are impacted. Using Fukushima Japanese data, social media is used to estimate geo-spatial regularities in movement and communication that can inform disaster response and risk estimation. Using Arab Spring data, we find that the spread of bots & extremists varies by country and time, to the extent that using twitter to understand who is important or what ideas are critical can be compromised. Bots and extremists can exploit disaster messaging to create havoc and facilitate criminal activity e.g. human trafficking. Event discovery mechanisms support isolating geo-epi-centers for key events become crucial. Spatial inference

Toward GEOS-6, A Global Cloud System Resolving Atmospheric Model

Science.gov (United States)

Putman, William M.

2010-01-01

NASA is committed to observing and understanding the weather and climate of our home planet through the use of multi-scale modeling systems and space-based observations. Global climate models have evolved to take advantage of the influx of multi- and many-core computing technologies and the availability of large clusters of multi-core microprocessors. GEOS-6 is a next-generation cloud system resolving atmospheric model that will place NASA at the forefront of scientific exploration of our atmosphere and climate. Model simulations with GEOS-6 will produce a realistic representation of our atmosphere on the scale of typical satellite observations, bringing a visual comprehension of model results to a new level among the climate enthusiasts. In preparation for GEOS-6, the agency's flagship Earth System Modeling Framework [JDl] has been enhanced to support cutting-edge high-resolution global climate and weather simulations. Improvements include a cubed-sphere grid that exposes parallelism; a non-hydrostatic finite volume dynamical core, and algorithm designed for co-processor technologies, among others. GEOS-6 represents a fundamental advancement in the capability of global Earth system models. The ability to directly compare global simulations at the resolution of spaceborne satellite images will lead to algorithm improvements and better utilization of space-based observations within the GOES data assimilation system

The Obesity Epidemic

Centers for Disease Control (CDC) Podcasts

2011-07-18

Learn about obesity and the community initiatives taking place to prevent and reduce this epidemic.  Created: 7/18/2011 by National Center for Chronic Disease Prevention and Health Promotion, Division of Nutrition, Physical Activity and Obesity.   Date Released: 7/18/2011.

Epidemic spreading with activity-driven awareness diffusion on multiplex network.

Science.gov (United States)

Guo, Quantong; Lei, Yanjun; Jiang, Xin; Ma, Yifang; Huo, Guanying; Zheng, Zhiming

2016-04-01

There has been growing interest in exploring the interplay between epidemic spreading with human response, since it is natural for people to take various measures when they become aware of epidemics. As a proper way to describe the multiple connections among people in reality, multiplex network, a set of nodes interacting through multiple sets of edges, has attracted much attention. In this paper, to explore the coupled dynamical processes, a multiplex network with two layers is built. Specifically, the information spreading layer is a time varying network generated by the activity driven model, while the contagion layer is a static network. We extend the microscopic Markov chain approach to derive the epidemic threshold of the model. Compared with extensive Monte Carlo simulations, the method shows high accuracy for the prediction of the epidemic threshold. Besides, taking different spreading models of awareness into consideration, we explored the interplay between epidemic spreading with awareness spreading. The results show that the awareness spreading can not only enhance the epidemic threshold but also reduce the prevalence of epidemics. When the spreading of awareness is defined as susceptible-infected-susceptible model, there exists a critical value where the dynamical process on the awareness layer can control the onset of epidemics; while if it is a threshold model, the epidemic threshold emerges an abrupt transition with the local awareness ratio α approximating 0.5. Moreover, we also find that temporal changes in the topology hinder the spread of awareness which directly affect the epidemic threshold, especially when the awareness layer is threshold model. Given that the threshold model is a widely used model for social contagion, this is an important and meaningful result. Our results could also lead to interesting future research about the different time-scales of structural changes in multiplex networks.

Epidemic spreading with activity-driven awareness diffusion on multiplex network

Science.gov (United States)

Guo, Quantong; Lei, Yanjun; Jiang, Xin; Ma, Yifang; Huo, Guanying; Zheng, Zhiming

2016-04-01

There has been growing interest in exploring the interplay between epidemic spreading with human response, since it is natural for people to take various measures when they become aware of epidemics. As a proper way to describe the multiple connections among people in reality, multiplex network, a set of nodes interacting through multiple sets of edges, has attracted much attention. In this paper, to explore the coupled dynamical processes, a multiplex network with two layers is built. Specifically, the information spreading layer is a time varying network generated by the activity driven model, while the contagion layer is a static network. We extend the microscopic Markov chain approach to derive the epidemic threshold of the model. Compared with extensive Monte Carlo simulations, the method shows high accuracy for the prediction of the epidemic threshold. Besides, taking different spreading models of awareness into consideration, we explored the interplay between epidemic spreading with awareness spreading. The results show that the awareness spreading can not only enhance the epidemic threshold but also reduce the prevalence of epidemics. When the spreading of awareness is defined as susceptible-infected-susceptible model, there exists a critical value where the dynamical process on the awareness layer can control the onset of epidemics; while if it is a threshold model, the epidemic threshold emerges an abrupt transition with the local awareness ratio α approximating 0.5. Moreover, we also find that temporal changes in the topology hinder the spread of awareness which directly affect the epidemic threshold, especially when the awareness layer is threshold model. Given that the threshold model is a widely used model for social contagion, this is an important and meaningful result. Our results could also lead to interesting future research about the different time-scales of structural changes in multiplex networks.

File Specification for GEOS-5 FP-IT (Forward Processing for Instrument Teams)

Science.gov (United States)

Lucchesi, R.

2013-01-01

The GEOS-5 FP-IT Atmospheric Data Assimilation System (GEOS-5 ADAS) uses an analysis developed jointly with NOAA's National Centers for Environmental Prediction (NCEP), which allows the Global Modeling and Assimilation Office (GMAO) to take advantage of the developments at NCEP and the Joint Center for Satellite Data Assimilation (JCSDA). The GEOS-5 AGCM uses the finite-volume dynamics (Lin, 2004) integrated with various physics packages (e.g, Bacmeister et al., 2006), under the Earth System Modeling Framework (ESMF) including the Catchment Land Surface Model (CLSM) (e.g., Koster et al., 2000). The GSI analysis is a three-dimensional variational (3DVar) analysis applied in grid-point space to facilitate the implementation of anisotropic, inhomogeneous covariances (e.g., Wu et al., 2002; Derber et al., 2003). The GSI implementation for GEOS-5 FP-IT incorporates a set of recursive filters that produce approximately Gaussian smoothing kernels and isotropic correlation functions. The GEOS-5 ADAS is documented in Rienecker et al. (2008). More recent updates to the model are presented in Molod et al. (2011). The GEOS-5 system actively assimilates roughly 2 × 10(exp 6) observations for each analysis, including about 7.5 × 10(exp 5) AIRS radiance data. The input stream is roughly twice this volume, but because of the large volume, the data are thinned commensurate with the analysis grid to reduce the computational burden. Data are also rejected from the analysis through quality control procedures designed to detect, for example, the presence of cloud. To minimize the spurious periodic perturbations of the analysis, GEOS-5 FP-IT uses the Incremental Analysis Update (IAU) technique developed by Bloom et al. (1996). More details of this procedure are given in Appendix A. The analysis is performed at a horizontal resolution of 0.625-degree longitude by 0.5-degree latitude and at 72 levels, extending to 0.01 hPa. All products are generated at the native resolution of the

Susceptible-infected-recovered epidemics in random networks with population awareness

Science.gov (United States)

Wu, Qingchu; Chen, Shufang

2017-10-01

The influence of epidemic information-based awareness on the spread of infectious diseases on networks cannot be ignored. Within the effective degree modeling framework, we discuss the susceptible-infected-recovered model in complex networks with general awareness and general degree distribution. By performing the linear stability analysis, the conditions of epidemic outbreak can be deduced and the results of the previous research can be further expanded. Results show that the local awareness can suppress significantly the epidemic spreading on complex networks via raising the epidemic threshold and such effects are closely related to the formulation of awareness functions. In addition, our results suggest that the recovered information-based awareness has no effect on the critical condition of epidemic outbreak.

Insights for the third Global Environment Outlook from related global scenario anlayses. Working paper for GEO-3

OpenAIRE

Bakkes JA; Goldewijk CGM; Meijer JR; Rothman DS; Vries HJM de; Woerden JW van; United Nations Environment Programme (UNEP); MNV

2001-01-01

This report relates to the ongoing development of scenarios for the third Global Environment Outlook (GEO-3) of UNEP. It illustrates the scale and type of environmental impacts that GEO-3 needs to consider. It does so by quantifying impacts using existing, recent studies whose scenarios come closest to the current tentative global storylines for GEO-3. With a view to GEO-3;s envisaged role as input for the Rio+10 Earth Summit in 2002, this report suggests a focus for the GEO-3 scenario analys...

Effects of epidemic threshold definition on disease spread statistics

Science.gov (United States)

Lagorio, C.; Migueles, M. V.; Braunstein, L. A.; López, E.; Macri, P. A.

2009-03-01

We study the statistical properties of SIR epidemics in random networks, when an epidemic is defined as only those SIR propagations that reach or exceed a minimum size sc. Using percolation theory to calculate the average fractional size of an epidemic, we find that the strength of the spanning link percolation cluster P∞ is an upper bound to . For small values of sc, P∞ is no longer a good approximation, and the average fractional size has to be computed directly. We find that the choice of sc is generally (but not always) guided by the network structure and the value of T of the disease in question. If the goal is to always obtain P∞ as the average epidemic size, one should choose sc to be the typical size of the largest percolation cluster at the critical percolation threshold for the transmissibility. We also study Q, the probability that an SIR propagation reaches the epidemic mass sc, and find that it is well characterized by percolation theory. We apply our results to real networks (DIMES and Tracerouter) to measure the consequences of the choice sc on predictions of average outcome sizes of computer failure epidemics.

The influence of school holiday timing on epidemic impact.

Science.gov (United States)

Eames, K T D

2014-09-01

The impact of reactive school closure on an epidemic is uncertain, since it is not clear how an unplanned closure will affect social mixing patterns. The effect of school holidays on social mixing patterns is better understood. Here, we use mathematical models to explore the influence of the timing of school holidays on the final size and peak incidence of an influenza-like epidemic. A well-timed holiday can reduce the impact of an epidemic, in particular substantially reducing an epidemic's peak. Final size and peak incidence cannot both be minimized: a later holiday is optimal for minimizing the final size, while an earlier holiday minimizes peak incidence. Using social mixing data from the UK, we estimated that, had the 2009 influenza epidemic not been interrupted by the school summer holidays, the final size would have been about 20% larger and the peak about 170% higher.

GeoInt: the first macroseismic intensity database for the Republic of Georgia

Science.gov (United States)

Varazanashvili, O.; Tsereteli, N.; Bonali, F. L.; Arabidze, V.; Russo, E.; Pasquaré Mariotto, F.; Gogoladze, Z.; Tibaldi, A.; Kvavadze, N.; Oppizzi, P.

2018-05-01

Our work is intended to present the new macroseismic intensity database for the Republic of Georgia—hereby named GeoInt—which includes earthquakes from the historical (from 1250 B.C. onwards) to the instrumental era. Such database is composed of 111 selected earthquakes and related 3944 intensity data points (IDPs) for 1509 different localities, reported in the Medvedev-Sponheuer-Karnik scale (MSK). Regarding the earthquakes, the M S is in the 3.3-7 range and the depth is in the 2-36 km range. The entire set of IDPs is characterized by intensities ranging from 2-3 to 9-10 and covers an area spanning from 39.508° N to 45.043° N in a N-S direction and from 37.324° E to 48.500° E in an E-W direction, with some of the IDPs located outside the Georgian border, in the (i) Republic of Armenia, (ii) Russian Federation, (iii) Republic of Turkey, and (iv) Republic of Azerbaijan. We have revised each single IDP and have reevaluated and homogenized intensity values to the MSK scale. In particular, regarding the whole set of 3944 IDPs, 348 belong to the Historical era (pre-1900) and 3596 belong to the instrumental era (post-1900). With particular regard to the 3596 IDPs, 105 are brand new (3%), whereas the intensity values for 804 IDPs have been reevaluated (22%); for 2687 IDPs (75%), intensities have been confirmed from previous interpretations. We introduce this database as a key input for further improvements in seismic hazard modeling and seismic risk calculation for this region, based on macroseismic intensity; we report all the 111 earthquakes with available macroseismic information. The GeoInt database is also accessible online at http://www.enguriproject.unimib.it and will be kept updated in the future.

The narcissism epidemic is dead : Long live the narcissism epidemic

NARCIS (Netherlands)

Wetzel, Eunike; Brown, Anna; Hill, Patrick; Chung, J.M.H.; Robins, R.W.; Roberts, B.W.

2017-01-01

Are recent cohorts of college students more narcissistic than their predecessors? To address debates about the so-called “narcissism epidemic,” we used data from three cohorts of students (N1990s = 1,166; N2000s = 33,647; N2010s = 25,412) to test whether narcissism levels (overall and specific

Photometrical research geostationary satellite "SBIRS GEO-2"

Science.gov (United States)

Sukhov, P. P.; Epishev, V. P; Sukhov, K. P; Kudak, V. I.

The multicolor photometrical observations GSS "Sbirs Geo-2" were carried in B,V,R filters out during the autumn equinox 2014 and spring 2015 y. Periodic appearance of many light curves and dips of mirror reflections suggests that the GSS was not in orbit in a static position, predetermined three-axis orientation and in dynamic motion. On the basis of computer modeling suggests the following dynamics GSS "Sbirs Geo-2" in orbit. Helically scanning the visible Earth's surface infrared satellite sensors come with period P1 = 15.66 sec. and the rocking of the GSS about the direction of the motion vector of the satellite in orbit with P2 = 62.64 sec., most likely with the purpose to survey the greatest possible portion of the earth's surface.

Geoscientific (GEO) database of the Andra Meuse / Haute-Marne research center

International Nuclear Information System (INIS)

Tabani, P.; Hemet, P.; Hermand, G.; Delay, J.; Auriere, C.

2010-01-01

Document available in extended abstract form only. The GEO database (geo-scientific database of the Meuse/Haute-Marne Center) is a tool developed by Andra, with a view to group in a secured computer form all data related to the acquisition of in situ and laboratory measurements made on solid and fluid samples. This database has three main functions: - Acquisition and management of data and computer files related to geological, geomechanical, hydrogeological and geochemical measurements on solid and fluid samples and in situ measurements (logging, on sample measurements, geological logs, etc). - Available consultation by the staff on Andra's intranet network for selective viewing of data linked to a borehole and/or a sample and for making computations and graphs on sets of laboratory measurements related to a sample. - Physical management of fluid and solid samples stored in a 'core library' in order to localize a sample, follow-up its movement out of the 'core library' to an organization, and carry out regular inventories. The GEO database is a relational Oracle data base. It is installed on a data server which stores information and manages the users' transactions. The users can consult, download and exploit data from any computer connected to the Andra network or Internet. Management of the access rights is made through a login/ password. Four geo-scientific explanations are linked to the Geo database, they are: - The Geosciences portal: The Geosciences portal is a web Intranet application accessible from the ANDRA network. It does not require a particular installation from the client and is accessible through the Internet navigator. A SQL Server Express database manages the users and access rights to the application. This application is used for the acquisition of hydrogeological and geochemical data collected on the field and on fluid samples, as well as data related to scientific work carried out at surface level or in drifts

Could the Recent Zika Epidemic Have Been Predicted?

Directory of Open Access Journals (Sweden)

Ángel G. Muñoz

2017-07-01

Full Text Available Given knowledge at the time, the recent 2015–2016 zika virus (ZIKV epidemic probably could not have been predicted. Without the prior knowledge of ZIKV being already present in South America, and given the lack of understanding of key epidemiologic processes and long-term records of ZIKV cases in the continent, the best related prediction could be carried out for the potential risk of a generic Aedes-borne disease epidemic. Here we use a recently published two-vector basic reproduction number model to assess the predictability of the conditions conducive to epidemics of diseases like zika, chikungunya, or dengue, transmitted by the independent or concurrent presence of Aedes aegypti and Aedes albopictus. We compare the potential risk of transmission forcing the model with the observed climate and with state-of-the-art operational forecasts from the North American Multi Model Ensemble (NMME, finding that the predictive skill of this new seasonal forecast system is highest for multiple countries in Latin America and the Caribbean during the December-February and March-May seasons, and slightly lower—but still of potential use to decision-makers—for the rest of the year. In particular, we find that above-normal suitable conditions for the occurrence of the zika epidemic at the beginning of 2015 could have been successfully predicted at least 1 month in advance for several zika hotspots, and in particular for Northeast Brazil: the heart of the epidemic. Nonetheless, the initiation and spread of an epidemic depends on the effect of multiple factors beyond climate conditions, and thus this type of approach must be considered as a guide and not as a formal predictive tool of vector-borne epidemics.

epidemic teach us?

African Journals Online (AJOL)

frequently brings shame, fear and guilt: dealing with this for some will begin a process of .... 'AZT treatment will have a limited effect on the epidemic, as we are targeting ... others to make the decisions that control my life. It is ironic that a society ...

Study on the interaction mechanism between the special geological environment and their extreme geo-microbes in Dagang Oilfield by combined methods

Science.gov (United States)

Yao, Jun

2010-05-01

Geo-microbes and their function were widespread ever since life appeared on the earth. Geo-microbiological process has left a rich and colorful material record in the geological body of earth, the most critical record of which is all sorts of organic hieroglyph and various forms of organic matter derived from bio-organisms, and oil field is the most ideal geological location to preserve these organic matters. It have already produced or might produce petroleum and natural gas sedimentary rocks under natural conditions, also known as olefiant (gas) rock or the parent rock, which is the product of the interaction between the life-system and earth environmental system in the specific geological conditions and integrate the whole microbial ecosystem in the geological time. The microbial community under extreme geological environment of Dagang Oilfield is relatively simple, therefore it is quite easy to investigate the special relationship between geo-microbes and biogeochemistry. We have mastered a large number of information related with the geological condition and biological species of Dagang Oilfield; what's more we also have isolated a number of archimycetes strains with different extremophiles capacity from the core samples collected in the Dagang oil field. At present, we are to proceed with the cooperative research at Environment School of Yale University and Institute of the Earth's biosphere using these strains. In the future, we will work together to carry out geological surveys in the field using international first-class equipment and methods and study the geological environment of Dagang Oilfield utilizing isotope techniques and mineral phase analysis method. Meanwhile we are going to undertake the on-line monitoring of the overall microbial activity of these collected geological samples, the specific metabolic activity of these extreme strains of microorganisms and the biomarkers produced during their metabolic processes under laboratory conditions

Dynamical Interplay between Awareness and Epidemic Spreading in Multiplex Networks

Science.gov (United States)

Granell, Clara; Gómez, Sergio; Arenas, Alex

2013-09-01

We present the analysis of the interrelation between two processes accounting for the spreading of an epidemic, and the information awareness to prevent its infection, on top of multiplex networks. This scenario is representative of an epidemic process spreading on a network of persistent real contacts, and a cyclic information awareness process diffusing in the network of virtual social contacts between the same individuals. The topology corresponds to a multiplex network where two diffusive processes are interacting affecting each other. The analysis using a microscopic Markov chain approach reveals the phase diagram of the incidence of the epidemics and allows us to capture the evolution of the epidemic threshold depending on the topological structure of the multiplex and the interrelation with the awareness process. Interestingly, the critical point for the onset of the epidemics has a critical value (metacritical point) defined by the awareness dynamics and the topology of the virtual network, from which the onset increases and the epidemics incidence decreases.

Dynamical interplay between awareness and epidemic spreading in multiplex networks.

Science.gov (United States)

Granell, Clara; Gómez, Sergio; Arenas, Alex

2013-09-20

We present the analysis of the interrelation between two processes accounting for the spreading of an epidemic, and the information awareness to prevent its infection, on top of multiplex networks. This scenario is representative of an epidemic process spreading on a network of persistent real contacts, and a cyclic information awareness process diffusing in the network of virtual social contacts between the same individuals. The topology corresponds to a multiplex network where two diffusive processes are interacting affecting each other. The analysis using a microscopic Markov chain approach reveals the phase diagram of the incidence of the epidemics and allows us to capture the evolution of the epidemic threshold depending on the topological structure of the multiplex and the interrelation with the awareness process. Interestingly, the critical point for the onset of the epidemics has a critical value (metacritical point) defined by the awareness dynamics and the topology of the virtual network, from which the onset increases and the epidemics incidence decreases.

Disease-induced resource constraints can trigger explosive epidemics

Science.gov (United States)

Böttcher, L.; Woolley-Meza, O.; Araújo, N. A. M.; Herrmann, H. J.; Helbing, D.

2015-11-01

Advances in mathematical epidemiology have led to a better understanding of the risks posed by epidemic spreading and informed strategies to contain disease spread. However, a challenge that has been overlooked is that, as a disease becomes more prevalent, it can limit the availability of the capital needed to effectively treat those who have fallen ill. Here we use a simple mathematical model to gain insight into the dynamics of an epidemic when the recovery of sick individuals depends on the availability of healing resources that are generated by the healthy population. We find that epidemics spiral out of control into “explosive” spread if the cost of recovery is above a critical cost. This can occur even when the disease would die out without the resource constraint. The onset of explosive epidemics is very sudden, exhibiting a discontinuous transition under very general assumptions. We find analytical expressions for the critical cost and the size of the explosive jump in infection levels in terms of the parameters that characterize the spreading process. Our model and results apply beyond epidemics to contagion dynamics that self-induce constraints on recovery, thereby amplifying the spreading process.

[A prognostic model of a cholera epidemic].

Science.gov (United States)

Boev, B V; Bondarenko, V M; Prokop'eva, N V; San Román, R T; Raygoza-Anaya, M; García de Alba, R

1994-01-01

A new model for the prognostication of cholera epidemic on the territory of a large city is proposed. This model reflects the characteristic feature of contacting infection by sensitive individuals due to the preservation of Vibrio cholerae in their water habitat. The mathematical model of the epidemic quantitatively reflects the processes of the spread of infection by kinetic equations describing the interaction of the streams of infected persons, the causative agents and susceptible persons. The functions and parameters of the model are linked with the distribution of individuals according to the duration of the incubation period and infectious process, as well as the period of asymptomatic carrier state. The computer realization of the model by means of IBM PC/AT made it possible to study the cholera epidemic which took place in Mexico in 1833. The verified model of the cholera epidemic was used for the prognostication of the possible spread of this infection in Guadalajara, taking into account changes in the epidemiological situation and the size of the population, as well as improvements in sanitary and hygienic conditions, in the city.

Synthesis and characterization of gold cubic nanoshells using water-soluble GeO2 templates

Science.gov (United States)

Wang, Cen; Tang, Peisong; Ge, Mingyuan; Xu, Xiaobin; Cao, Feng; Jiang, J. Z.

2011-04-01

Size-tunable GeO2 nanocubes were initially prepared by a modified sono-assisted reverse micelle method and then functionalized with an amino-terminated silanizing agent. Subsequently, gold decorated GeO2 nanocomposites were prepared at pH ≈ 7 and 80 °C. It was found that well-dispersed gold nanoparticles on GeO2 nanocubes could be obtained only if gold salt is abundant to favor simultaneous, homogeneous nucleation of gold particles. Additional gold ions were reduced onto these attached 'seed' particles accompanied by synchronous dissolution of water-soluble GeO2 cores, resulting in gold hollow cubic shells. The GeO2 nanocubes and Au/GeO2 nanocomposites as well as gold hollow cubic shells were characterized by transmission electron microscopy, scanning electron microscopy, x-ray diffraction and UV-visible spectroscopy. In particular, gold hollow cubic shells feature a plasmon resonance peak at above 900 nm, which renders it quite promising in biochemical applications.

Synthesis and characterization of gold cubic nanoshells using water-soluble GeO2 templates

International Nuclear Information System (INIS)

Wang Cen; Ge Mingyuan; Xu Xiaobin; Jiang, J Z; Tang Peisong; Cao Feng

2011-01-01

Size-tunable GeO 2 nanocubes were initially prepared by a modified sono-assisted reverse micelle method and then functionalized with an amino-terminated silanizing agent. Subsequently, gold decorated GeO 2 nanocomposites were prepared at pH ∼ 7 and 80 deg. C. It was found that well-dispersed gold nanoparticles on GeO 2 nanocubes could be obtained only if gold salt is abundant to favor simultaneous, homogeneous nucleation of gold particles. Additional gold ions were reduced onto these attached 'seed' particles accompanied by synchronous dissolution of water-soluble GeO 2 cores, resulting in gold hollow cubic shells. The GeO 2 nanocubes and Au/GeO 2 nanocomposites as well as gold hollow cubic shells were characterized by transmission electron microscopy, scanning electron microscopy, x-ray diffraction and UV-visible spectroscopy. In particular, gold hollow cubic shells feature a plasmon resonance peak at above 900 nm, which renders it quite promising in biochemical applications.

High compressive resistance drainage geo composites; Geocompuestos de drenaje de alta resistencia a compresion

Energy Technology Data Exchange (ETDEWEB)

Castelo Nolla, J.; Gutierrez Cuevas, J.

2014-02-01

There are several typologies of drainage geo composites available in the market which can be classified according to their structures as: cus pated, mono filaments, geo nets and those products formed by the combination of a draining blanket with a series of mini-pipes. Each one of them has its own range of compressive resistances. There are applications, such as are the new cells of landfills or mines and roads or railways over large embankments, where the pressure exerted on the geo composite exceeds the compressive resistance of the majority of these typologies. For all this applications, besides providing and adequate flow capacity, it must be ensured that the chosen typology is able to withstand the required loading without collapsing and guaranteeing an adequate factor of safety. This article will expose that, currently, the only typology of drainage geo composites that can bear these loadings while maintaining its drainage properties is the tri-planar geo net. (Author)

Assessment of Aerosol Distributions from GEOS-5 Using the CALIPSO Feature Mask

Science.gov (United States)

Welton, Ellsworth

2010-01-01

A-train sensors such as MODIS, MISR, and CALIPSO are used to determine aerosol properties, and in the process a means of estimating aerosol type (e.g. smoke vs. dust). Correct classification of aerosol type is important for climate assessment, air quality applications, and for comparisons and analysis with aerosol transport models. The Aerosols-Clouds-Ecosystems (ACE) satellite mission proposed in the NRC Decadal Survey describes a next generation aerosol and cloud suite similar to the current A-train, including a lidar. The future ACE lidar must be able to determine aerosol type effectively in conjunction with modeling activities to achieve ACE objectives. Here we examine the current capabilities of CALIPSO and the NASA Goddard Earth Observing System general circulation model and data assimilation system (GEOS-5), to place future ACE needs in context. The CALIPSO level 2 feature mask includes vertical profiles of aerosol layers classified by type. GEOS-5 provides global 3D aerosol mass for sulfate, sea salt, dust, and black and organic carbon. A GEOS aerosol scene classification algorithm has been developed to provide estimates of aerosol mixtures and extinction profiles along the CALIPSO orbit track. In previous work, initial comparisons between GEOS-5 derived aerosol mixtures and CALIPSO derived aerosol types were presented for July 2007. In general, the results showed that model and lidar derived aerosol types did not agree well in the boundary layer. Agreement was poor over Europe, where CALIPSO indicated the presence of dust and pollution mixtures yet GEOS-5 was dominated by pollution with little dust. Over the ocean in the tropics, the model appeared to contain less sea salt than detected by CALIPSO, yet at high latitudes the situation was reserved. Agreement between CALIPSO and GEOS-5, aerosol types improved above the boundary layer, primarily in dust and smoke dominated regions. At higher altitudes (> 5 km), the model contained aerosol layers not detected

2,500-year Evolution of the Term Epidemic

Science.gov (United States)

Martin-Granel, Estelle

2006-01-01

The term epidemic (from the Greek epi [on] plus demos [people]), first used by Homer, took its medical meaning when Hippocrates used it as the title of one of his famous treatises. At that time, epidemic was the name given to a collection of clinical syndromes, such as coughs or diarrheas, occurring and propagating in a given period at a given location. Over centuries, the form and meaning of the term have changed. Successive epidemics of plague in the Middle Ages contributed to the definition of an epidemic as the propagation of a single, well-defined disease. The meaning of the term continued to evolve in the 19th-century era of microbiology. Its most recent semantic evolution dates from the last quarter of the 20th century, and this evolution is likely to continue in the future. PMID:16707055

A Geovisual Analytic Approach to Understanding Geo-Social Relationships in the International Trade Network

OpenAIRE

Luo, Wei; Yin, Peifeng; Di, Qian; Hardisty, Frank; MacEachren, Alan M.

2014-01-01

The world has become a complex set of geo-social systems interconnected by networks, including transportation networks, telecommunications, and the internet. Understanding the interactions between spatial and social relationships within such geo-social systems is a challenge. This research aims to address this challenge through the framework of geovisual analytics. We present the GeoSocialApp which implements traditional network analysis methods in the context of explicitly spatial and social...

The epidemic of Tuberculosis on vaccinated population

Science.gov (United States)

Syahrini, Intan; Sriwahyuni; Halfiani, Vera; Meurah Yuni, Syarifah; Iskandar, Taufiq; Rasudin; Ramli, Marwan

2017-09-01

Tuberculosis is an infectious disease which has caused a large number of mortality in Indonesia. This disease is caused by Mycrobacterium tuberculosis. Besides affecting lung, this disease also affects other organs such as lymph gland, intestine, kidneys, uterus, bone, and brain. This article discusses the epidemic of tuberculosis through employing the SEIR model. Here, the population is divided into four compartments which are susceptible, exposed, infected and recovered. The susceptible population is further grouped into two which are vaccinated group and unvaccinated group. The behavior of the epidemic is investigated through analysing the equilibrium of the model. The result shows that administering vaccine to the susceptible population contributes to the reduction of the tuberculosis epidemic rate.