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Sample records for genetic algorithm predicting

  1. Predicting mining activity with parallel genetic algorithms

    Science.gov (United States)

    Talaie, S.; Leigh, R.; Louis, S.J.; Raines, G.L.; Beyer, H.G.; O'Reilly, U.M.; Banzhaf, Arnold D.; Blum, W.; Bonabeau, C.; Cantu-Paz, E.W.; ,; ,

    2005-01-01

    We explore several different techniques in our quest to improve the overall model performance of a genetic algorithm calibrated probabilistic cellular automata. We use the Kappa statistic to measure correlation between ground truth data and data predicted by the model. Within the genetic algorithm, we introduce a new evaluation function sensitive to spatial correctness and we explore the idea of evolving different rule parameters for different subregions of the land. We reduce the time required to run a simulation from 6 hours to 10 minutes by parallelizing the code and employing a 10-node cluster. Our empirical results suggest that using the spatially sensitive evaluation function does indeed improve the performance of the model and our preliminary results also show that evolving different rule parameters for different regions tends to improve overall model performance. Copyright 2005 ACM.

  2. Real coded genetic algorithm for fuzzy time series prediction

    Science.gov (United States)

    Jain, Shilpa; Bisht, Dinesh C. S.; Singh, Phool; Mathpal, Prakash C.

    2017-10-01

    Genetic Algorithm (GA) forms a subset of evolutionary computing, rapidly growing area of Artificial Intelligence (A.I.). Some variants of GA are binary GA, real GA, messy GA, micro GA, saw tooth GA, differential evolution GA. This research article presents a real coded GA for predicting enrollments of University of Alabama. Data of Alabama University is a fuzzy time series. Here, fuzzy logic is used to predict enrollments of Alabama University and genetic algorithm optimizes fuzzy intervals. Results are compared to other eminent author works and found satisfactory, and states that real coded GA are fast and accurate.

  3. Genetic algorithms

    Science.gov (United States)

    Wang, Lui; Bayer, Steven E.

    1991-01-01

    Genetic algorithms are mathematical, highly parallel, adaptive search procedures (i.e., problem solving methods) based loosely on the processes of natural genetics and Darwinian survival of the fittest. Basic genetic algorithms concepts are introduced, genetic algorithm applications are introduced, and results are presented from a project to develop a software tool that will enable the widespread use of genetic algorithm technology.

  4. Shape: automatic conformation prediction of carbohydrates using a genetic algorithm

    Directory of Open Access Journals (Sweden)

    Rosen Jimmy

    2009-09-01

    Full Text Available Abstract Background Detailed experimental three dimensional structures of carbohydrates are often difficult to acquire. Molecular modelling and computational conformation prediction are therefore commonly used tools for three dimensional structure studies. Modelling procedures generally require significant training and computing resources, which is often impractical for most experimental chemists and biologists. Shape has been developed to improve the availability of modelling in this field. Results The Shape software package has been developed for simplicity of use and conformation prediction performance. A trivial user interface coupled to an efficient genetic algorithm conformation search makes it a powerful tool for automated modelling. Carbohydrates up to a few hundred atoms in size can be investigated on common computer hardware. It has been shown to perform well for the prediction of over four hundred bioactive oligosaccharides, as well as compare favourably with previously published studies on carbohydrate conformation prediction. Conclusion The Shape fully automated conformation prediction can be used by scientists who lack significant modelling training, and performs well on computing hardware such as laptops and desktops. It can also be deployed on computer clusters for increased capacity. The prediction accuracy under the default settings is good, as it agrees well with experimental data and previously published conformation prediction studies. This software is available both as open source and under commercial licenses.

  5. Reliable prediction of adsorption isotherms via genetic algorithm molecular simulation.

    Science.gov (United States)

    LoftiKatooli, L; Shahsavand, A

    2017-01-01

    Conventional molecular simulation techniques such as grand canonical Monte Carlo (GCMC) strictly rely on purely random search inside the simulation box for predicting the adsorption isotherms. This blind search is usually extremely time demanding for providing a faithful approximation of the real isotherm and in some cases may lead to non-optimal solutions. A novel approach is presented in this article which does not use any of the classical steps of the standard GCMC method, such as displacement, insertation, and removal. The new approach is based on the well-known genetic algorithm to find the optimal configuration for adsorption of any adsorbate on a structured adsorbent under prevailing pressure and temperature. The proposed approach considers the molecular simulation problem as a global optimization challenge. A detailed flow chart of our so-called genetic algorithm molecular simulation (GAMS) method is presented, which is entirely different from traditions molecular simulation approaches. Three real case studies (for adsorption of CO 2 and H 2 over various zeolites) are borrowed from literature to clearly illustrate the superior performances of the proposed method over the standard GCMC technique. For the present method, the average absolute values of percentage errors are around 11% (RHO-H 2 ), 5% (CHA-CO 2 ), and 16% (BEA-CO 2 ), while they were about 70%, 15%, and 40% for the standard GCMC technique, respectively.

  6. Ternary alloy material prediction using genetic algorithm and cluster expansion

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Chong [Iowa State Univ., Ames, IA (United States)

    2015-12-01

    This thesis summarizes our study on the crystal structures prediction of Fe-V-Si system using genetic algorithm and cluster expansion. Our goal is to explore and look for new stable compounds. We started from the current ten known experimental phases, and calculated formation energies of those compounds using density functional theory (DFT) package, namely, VASP. The convex hull was generated based on the DFT calculations of the experimental known phases. Then we did random search on some metal rich (Fe and V) compositions and found that the lowest energy structures were body centered cube (bcc) underlying lattice, under which we did our computational systematic searches using genetic algorithm and cluster expansion. Among hundreds of the searched compositions, thirteen were selected and DFT formation energies were obtained by VASP. The stability checking of those thirteen compounds was done in reference to the experimental convex hull. We found that the composition, 24-8-16, i.e., Fe3VSi2 is a new stable phase and it can be very inspiring to the future experiments.

  7. Comparison of genetic algorithm and imperialist competitive algorithms in predicting bed load transport in clean pipe.

    Science.gov (United States)

    Ebtehaj, Isa; Bonakdari, Hossein

    2014-01-01

    The existence of sediments in wastewater greatly affects the performance of the sewer and wastewater transmission systems. Increased sedimentation in wastewater collection systems causes problems such as reduced transmission capacity and early combined sewer overflow. The article reviews the performance of the genetic algorithm (GA) and imperialist competitive algorithm (ICA) in minimizing the target function (mean square error of observed and predicted Froude number). To study the impact of bed load transport parameters, using four non-dimensional groups, six different models have been presented. Moreover, the roulette wheel selection method is used to select the parents. The ICA with root mean square error (RMSE) = 0.007, mean absolute percentage error (MAPE) = 3.5% show better results than GA (RMSE = 0.007, MAPE = 5.6%) for the selected model. All six models return better results than the GA. Also, the results of these two algorithms were compared with multi-layer perceptron and existing equations.

  8. Geometric Semantic Genetic Programming Algorithm and Slump Prediction

    OpenAIRE

    Xu, Juncai; Shen, Zhenzhong; Ren, Qingwen; Xie, Xin; Yang, Zhengyu

    2017-01-01

    Research on the performance of recycled concrete as building material in the current world is an important subject. Given the complex composition of recycled concrete, conventional methods for forecasting slump scarcely obtain satisfactory results. Based on theory of nonlinear prediction method, we propose a recycled concrete slump prediction model based on geometric semantic genetic programming (GSGP) and combined it with recycled concrete features. Tests show that the model can accurately p...

  9. Increasing Prediction the Original Final Year Project of Student Using Genetic Algorithm

    Science.gov (United States)

    Saragih, Rijois Iboy Erwin; Turnip, Mardi; Sitanggang, Delima; Aritonang, Mendarissan; Harianja, Eva

    2018-04-01

    Final year project is very important forgraduation study of a student. Unfortunately, many students are not seriouslydidtheir final projects. Many of studentsask for someone to do it for them. In this paper, an application of genetic algorithms to predict the original final year project of a studentis proposed. In the simulation, the data of the final project for the last 5 years is collected. The genetic algorithm has several operators namely population, selection, crossover, and mutation. The result suggest that genetic algorithm can do better prediction than other comparable model. Experimental results of predicting showed that 70% was more accurate than the previous researched.

  10. Adaboost Ensemble with Simple Genetic Algorithm for Student Prediction Mode

    OpenAIRE

    AhmedSharaf ElDen; ElDen1Malaka A. Moustafa2Hany; M. Harb; AbdelH.Emara

    2013-01-01

    Predicting the student performance is a great concern to the higher education managements.Thisprediction helps to identify and to improve students' performance.Several factors may improve thisperformance.In the present study, we employ the data mining processes, particularly classification, toenhance the quality of the higher educational system. Recently, a new direction is used for the improvementof the classification accuracy by combining classifiers.In thispaper, we design and evaluate a f...

  11. Beam-column joint shear prediction using hybridized deep learning neural network with genetic algorithm

    Science.gov (United States)

    Mundher Yaseen, Zaher; Abdulmohsin Afan, Haitham; Tran, Minh-Tung

    2018-04-01

    Scientifically evidenced that beam-column joints are a critical point in the reinforced concrete (RC) structure under the fluctuation loads effects. In this novel hybrid data-intelligence model developed to predict the joint shear behavior of exterior beam-column structure frame. The hybrid data-intelligence model is called genetic algorithm integrated with deep learning neural network model (GA-DLNN). The genetic algorithm is used as prior modelling phase for the input approximation whereas the DLNN predictive model is used for the prediction phase. To demonstrate this structural problem, experimental data is collected from the literature that defined the dimensional and specimens’ properties. The attained findings evidenced the efficitveness of the hybrid GA-DLNN in modelling beam-column joint shear problem. In addition, the accurate prediction achived with less input variables owing to the feasibility of the evolutionary phase.

  12. From Genetics to Genetic Algorithms

    Indian Academy of Sciences (India)

    Genetic algorithms (GAs) are computational optimisation schemes with an ... The algorithms solve optimisation problems ..... Genetic Algorithms in Search, Optimisation and Machine. Learning, Addison-Wesley Publishing Company, Inc. 1989.

  13. Crystal structure prediction of flexible molecules using parallel genetic algorithms with a standard force field.

    Science.gov (United States)

    Kim, Seonah; Orendt, Anita M; Ferraro, Marta B; Facelli, Julio C

    2009-10-01

    This article describes the application of our distributed computing framework for crystal structure prediction (CSP) the modified genetic algorithms for crystal and cluster prediction (MGAC), to predict the crystal structure of flexible molecules using the general Amber force field (GAFF) and the CHARMM program. The MGAC distributed computing framework includes a series of tightly integrated computer programs for generating the molecule's force field, sampling crystal structures using a distributed parallel genetic algorithm and local energy minimization of the structures followed by the classifying, sorting, and archiving of the most relevant structures. Our results indicate that the method can consistently find the experimentally known crystal structures of flexible molecules, but the number of missing structures and poor ranking observed in some crystals show the need for further improvement of the potential. Copyright 2009 Wiley Periodicals, Inc.

  14. Research on prediction of agricultural machinery total power based on grey model optimized by genetic algorithm

    Science.gov (United States)

    Xie, Yan; Li, Mu; Zhou, Jin; Zheng, Chang-zheng

    2009-07-01

    Agricultural machinery total power is an important index to reflex and evaluate the level of agricultural mechanization. It is the power source of agricultural production, and is the main factors to enhance the comprehensive agricultural production capacity expand production scale and increase the income of the farmers. Its demand is affected by natural, economic, technological and social and other "grey" factors. Therefore, grey system theory can be used to analyze the development of agricultural machinery total power. A method based on genetic algorithm optimizing grey modeling process is introduced in this paper. This method makes full use of the advantages of the grey prediction model and characteristics of genetic algorithm to find global optimization. So the prediction model is more accurate. According to data from a province, the GM (1, 1) model for predicting agricultural machinery total power was given based on the grey system theories and genetic algorithm. The result indicates that the model can be used as agricultural machinery total power an effective tool for prediction.

  15. Genetic algorithm based adaptive neural network ensemble and its application in predicting carbon flux

    Science.gov (United States)

    Xue, Y.; Liu, S.; Hu, Y.; Yang, J.; Chen, Q.

    2007-01-01

    To improve the accuracy in prediction, Genetic Algorithm based Adaptive Neural Network Ensemble (GA-ANNE) is presented. Intersections are allowed between different training sets based on the fuzzy clustering analysis, which ensures the diversity as well as the accuracy of individual Neural Networks (NNs). Moreover, to improve the accuracy of the adaptive weights of individual NNs, GA is used to optimize the cluster centers. Empirical results in predicting carbon flux of Duke Forest reveal that GA-ANNE can predict the carbon flux more accurately than Radial Basis Function Neural Network (RBFNN), Bagging NN ensemble, and ANNE. ?? 2007 IEEE.

  16. Predictive Control of Hydronic Floor Heating Systems using Neural Networks and Genetic Algorithms

    DEFF Research Database (Denmark)

    Vinther, Kasper; Green, Torben; Østergaard, Søren

    2017-01-01

    This paper presents the use a neural network and a micro genetic algorithm to optimize future set-points in existing hydronic floor heating systems for improved energy efficiency. The neural network can be trained to predict the impact of changes in set-points on future room temperatures. Additio...... space is not guaranteed. Evaluation of the performance of multiple neural networks is performed, using different levels of information, and optimization results are presented on a detailed house simulation model....

  17. Screw Remaining Life Prediction Based on Quantum Genetic Algorithm and Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Xiaochen Zhang

    2017-01-01

    Full Text Available To predict the remaining life of ball screw, a screw remaining life prediction method based on quantum genetic algorithm (QGA and support vector machine (SVM is proposed. A screw accelerated test bench is introduced. Accelerometers are installed to monitor the performance degradation of ball screw. Combined with wavelet packet decomposition and isometric mapping (Isomap, the sensitive feature vectors are obtained and stored in database. Meanwhile, the sensitive feature vectors are randomly chosen from the database and constitute training samples and testing samples. Then the optimal kernel function parameter and penalty factor of SVM are searched with the method of QGA. Finally, the training samples are used to train optimized SVM while testing samples are adopted to test the prediction accuracy of the trained SVM so the screw remaining life prediction model can be got. The experiment results show that the screw remaining life prediction model could effectively predict screw remaining life.

  18. Prediction of Aerodynamic Coefficients for Wind Tunnel Data using a Genetic Algorithm Optimized Neural Network

    Science.gov (United States)

    Rajkumar, T.; Aragon, Cecilia; Bardina, Jorge; Britten, Roy

    2002-01-01

    A fast, reliable way of predicting aerodynamic coefficients is produced using a neural network optimized by a genetic algorithm. Basic aerodynamic coefficients (e.g. lift, drag, pitching moment) are modelled as functions of angle of attack and Mach number. The neural network is first trained on a relatively rich set of data from wind tunnel tests of numerical simulations to learn an overall model. Most of the aerodynamic parameters can be well-fitted using polynomial functions. A new set of data, which can be relatively sparse, is then supplied to the network to produce a new model consistent with the previous model and the new data. Because the new model interpolates realistically between the sparse test data points, it is suitable for use in piloted simulations. The genetic algorithm is used to choose a neural network architecture to give best results, avoiding over-and under-fitting of the test data.

  19. An Automated Defect Prediction Framework using Genetic Algorithms: A Validation of Empirical Studies

    Directory of Open Access Journals (Sweden)

    Juan Murillo-Morera

    2016-05-01

    Full Text Available Today, it is common for software projects to collect measurement data through development processes. With these data, defect prediction software can try to estimate the defect proneness of a software module, with the objective of assisting and guiding software practitioners. With timely and accurate defect predictions, practitioners can focus their limited testing resources on higher risk areas. This paper reports the results of three empirical studies that uses an automated genetic defect prediction framework. This framework generates and compares different learning schemes (preprocessing + attribute selection + learning algorithms and selects the best one using a genetic algorithm, with the objective to estimate the defect proneness of a software module. The first empirical study is a performance comparison of our framework with the most important framework of the literature. The second empirical study is a performance and runtime comparison between our framework and an exhaustive framework. The third empirical study is a sensitivity analysis. The last empirical study, is our main contribution in this paper. Performance of the software development defect prediction models (using AUC, Area Under the Curve was validated using NASA-MDP and PROMISE data sets. Seventeen data sets from NASA-MDP (13 and PROMISE (4 projects were analyzed running a NxM-fold cross-validation. A genetic algorithm was used to select the components of the learning schemes automatically, and to assess and report the results. Our results reported similar performance between frameworks. Our framework reported better runtime than exhaustive framework. Finally, we reported the best configuration according to sensitivity analysis.

  20. Application of Genetic Algorithm to Predict Optimal Sowing Region and Timing for Kentucky Bluegrass in China.

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    Erxu Pi

    Full Text Available Temperature is a predominant environmental factor affecting grass germination and distribution. Various thermal-germination models for prediction of grass seed germination have been reported, in which the relationship between temperature and germination were defined with kernel functions, such as quadratic or quintic function. However, their prediction accuracies warrant further improvements. The purpose of this study is to evaluate the relative prediction accuracies of genetic algorithm (GA models, which are automatically parameterized with observed germination data. The seeds of five P. pratensis (Kentucky bluegrass, KB cultivars were germinated under 36 day/night temperature regimes ranging from 5/5 to 40/40 °C with 5 °C increments. Results showed that optimal germination percentages of all five tested KB cultivars were observed under a fluctuating temperature regime of 20/25 °C. Meanwhile, the constant temperature regimes (e.g., 5/5, 10/10, 15/15 °C, etc. suppressed the germination of all five cultivars. Furthermore, the back propagation artificial neural network (BP-ANN algorithm was integrated to optimize temperature-germination response models from these observed germination data. It was found that integrations of GA-BP-ANN (back propagation aided genetic algorithm artificial neural network significantly reduced the Root Mean Square Error (RMSE values from 0.21~0.23 to 0.02~0.09. In an effort to provide a more reliable prediction of optimum sowing time for the tested KB cultivars in various regions in the country, the optimized GA-BP-ANN models were applied to map spatial and temporal germination percentages of blue grass cultivars in China. Our results demonstrate that the GA-BP-ANN model is a convenient and reliable option for constructing thermal-germination response models since it automates model parameterization and has excellent prediction accuracy.

  1. Artificial Neural Network and Genetic Algorithm Hybrid Intelligence for Predicting Thai Stock Price Index Trend

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    Montri Inthachot

    2016-01-01

    Full Text Available This study investigated the use of Artificial Neural Network (ANN and Genetic Algorithm (GA for prediction of Thailand’s SET50 index trend. ANN is a widely accepted machine learning method that uses past data to predict future trend, while GA is an algorithm that can find better subsets of input variables for importing into ANN, hence enabling more accurate prediction by its efficient feature selection. The imported data were chosen technical indicators highly regarded by stock analysts, each represented by 4 input variables that were based on past time spans of 4 different lengths: 3-, 5-, 10-, and 15-day spans before the day of prediction. This import undertaking generated a big set of diverse input variables with an exponentially higher number of possible subsets that GA culled down to a manageable number of more effective ones. SET50 index data of the past 6 years, from 2009 to 2014, were used to evaluate this hybrid intelligence prediction accuracy, and the hybrid’s prediction results were found to be more accurate than those made by a method using only one input variable for one fixed length of past time span.

  2. Artificial Neural Network and Genetic Algorithm Hybrid Intelligence for Predicting Thai Stock Price Index Trend

    Science.gov (United States)

    Boonjing, Veera; Intakosum, Sarun

    2016-01-01

    This study investigated the use of Artificial Neural Network (ANN) and Genetic Algorithm (GA) for prediction of Thailand's SET50 index trend. ANN is a widely accepted machine learning method that uses past data to predict future trend, while GA is an algorithm that can find better subsets of input variables for importing into ANN, hence enabling more accurate prediction by its efficient feature selection. The imported data were chosen technical indicators highly regarded by stock analysts, each represented by 4 input variables that were based on past time spans of 4 different lengths: 3-, 5-, 10-, and 15-day spans before the day of prediction. This import undertaking generated a big set of diverse input variables with an exponentially higher number of possible subsets that GA culled down to a manageable number of more effective ones. SET50 index data of the past 6 years, from 2009 to 2014, were used to evaluate this hybrid intelligence prediction accuracy, and the hybrid's prediction results were found to be more accurate than those made by a method using only one input variable for one fixed length of past time span. PMID:27974883

  3. Paroxysmal atrial fibrillation prediction based on HRV analysis and non-dominated sorting genetic algorithm III.

    Science.gov (United States)

    Boon, K H; Khalil-Hani, M; Malarvili, M B

    2018-01-01

    This paper presents a method that able to predict the paroxysmal atrial fibrillation (PAF). The method uses shorter heart rate variability (HRV) signals when compared to existing methods, and achieves good prediction accuracy. PAF is a common cardiac arrhythmia that increases the health risk of a patient, and the development of an accurate predictor of the onset of PAF is clinical important because it increases the possibility to electrically stabilize and prevent the onset of atrial arrhythmias with different pacing techniques. We propose a multi-objective optimization algorithm based on the non-dominated sorting genetic algorithm III for optimizing the baseline PAF prediction system, that consists of the stages of pre-processing, HRV feature extraction, and support vector machine (SVM) model. The pre-processing stage comprises of heart rate correction, interpolation, and signal detrending. After that, time-domain, frequency-domain, non-linear HRV features are extracted from the pre-processed data in feature extraction stage. Then, these features are used as input to the SVM for predicting the PAF event. The proposed optimization algorithm is used to optimize the parameters and settings of various HRV feature extraction algorithms, select the best feature subsets, and tune the SVM parameters simultaneously for maximum prediction performance. The proposed method achieves an accuracy rate of 87.7%, which significantly outperforms most of the previous works. This accuracy rate is achieved even with the HRV signal length being reduced from the typical 30 min to just 5 min (a reduction of 83%). Furthermore, another significant result is the sensitivity rate, which is considered more important that other performance metrics in this paper, can be improved with the trade-off of lower specificity. Copyright © 2017 Elsevier B.V. All rights reserved.

  4. The fatigue life prediction of aluminium alloy using genetic algorithm and neural network

    Science.gov (United States)

    Susmikanti, Mike

    2013-09-01

    The behavior of the fatigue life of the industrial materials is very important. In many cases, the material with experiencing fatigue life cannot be avoided, however, there are many ways to control their behavior. Many investigations of the fatigue life phenomena of alloys have been done, but it is high cost and times consuming computation. This paper report the modeling and simulation approaches to predict the fatigue life behavior of Aluminum Alloys and resolves some problems of computation. First, the simulation using genetic algorithm was utilized to optimize the load to obtain the stress values. These results can be used to provide N-cycle fatigue life of the material. Furthermore, the experimental data was applied as input data in the neural network learning, while the samples data were applied for testing of the training data. Finally, the multilayer perceptron algorithm is applied to predict whether the given data sets in accordance with the fatigue life of the alloy. To achieve rapid convergence, the Levenberg-Marquardt algorithm was also employed. The simulations results shows that the fatigue behaviors of aluminum under pressure can be predicted. In addition, implementation of neural networks successfully identified a model for material fatigue life.

  5. Ab-initio conformational epitope structure prediction using genetic algorithm and SVM for vaccine design.

    Science.gov (United States)

    Moghram, Basem Ameen; Nabil, Emad; Badr, Amr

    2018-01-01

    T-cell epitope structure identification is a significant challenging immunoinformatic problem within epitope-based vaccine design. Epitopes or antigenic peptides are a set of amino acids that bind with the Major Histocompatibility Complex (MHC) molecules. The aim of this process is presented by Antigen Presenting Cells to be inspected by T-cells. MHC-molecule-binding epitopes are responsible for triggering the immune response to antigens. The epitope's three-dimensional (3D) molecular structure (i.e., tertiary structure) reflects its proper function. Therefore, the identification of MHC class-II epitopes structure is a significant step towards epitope-based vaccine design and understanding of the immune system. In this paper, we propose a new technique using a Genetic Algorithm for Predicting the Epitope Structure (GAPES), to predict the structure of MHC class-II epitopes based on their sequence. The proposed Elitist-based genetic algorithm for predicting the epitope's tertiary structure is based on Ab-Initio Empirical Conformational Energy Program for Peptides (ECEPP) Force Field Model. The developed secondary structure prediction technique relies on Ramachandran Plot. We used two alignment algorithms: the ROSS alignment and TM-Score alignment. We applied four different alignment approaches to calculate the similarity scores of the dataset under test. We utilized the support vector machine (SVM) classifier as an evaluation of the prediction performance. The prediction accuracy and the Area Under Receiver Operating Characteristic (ROC) Curve (AUC) were calculated as measures of performance. The calculations are performed on twelve similarity-reduced datasets of the Immune Epitope Data Base (IEDB) and a large dataset of peptide-binding affinities to HLA-DRB1*0101. The results showed that GAPES was reliable and very accurate. We achieved an average prediction accuracy of 93.50% and an average AUC of 0.974 in the IEDB dataset. Also, we achieved an accuracy of 95

  6. A Rule-Based Model for Bankruptcy Prediction Based on an Improved Genetic Ant Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Yudong Zhang

    2013-01-01

    Full Text Available In this paper, we proposed a hybrid system to predict corporate bankruptcy. The whole procedure consists of the following four stages: first, sequential forward selection was used to extract the most important features; second, a rule-based model was chosen to fit the given dataset since it can present physical meaning; third, a genetic ant colony algorithm (GACA was introduced; the fitness scaling strategy and the chaotic operator were incorporated with GACA, forming a new algorithm—fitness-scaling chaotic GACA (FSCGACA, which was used to seek the optimal parameters of the rule-based model; and finally, the stratified K-fold cross-validation technique was used to enhance the generalization of the model. Simulation experiments of 1000 corporations’ data collected from 2006 to 2009 demonstrated that the proposed model was effective. It selected the 5 most important factors as “net income to stock broker’s equality,” “quick ratio,” “retained earnings to total assets,” “stockholders’ equity to total assets,” and “financial expenses to sales.” The total misclassification error of the proposed FSCGACA was only 7.9%, exceeding the results of genetic algorithm (GA, ant colony algorithm (ACA, and GACA. The average computation time of the model is 2.02 s.

  7. A Genetic Algorithm Based Support Vector Machine Model for Blood-Brain Barrier Penetration Prediction

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    Daqing Zhang

    2015-01-01

    Full Text Available Blood-brain barrier (BBB is a highly complex physical barrier determining what substances are allowed to enter the brain. Support vector machine (SVM is a kernel-based machine learning method that is widely used in QSAR study. For a successful SVM model, the kernel parameters for SVM and feature subset selection are the most important factors affecting prediction accuracy. In most studies, they are treated as two independent problems, but it has been proven that they could affect each other. We designed and implemented genetic algorithm (GA to optimize kernel parameters and feature subset selection for SVM regression and applied it to the BBB penetration prediction. The results show that our GA/SVM model is more accurate than other currently available log BB models. Therefore, to optimize both SVM parameters and feature subset simultaneously with genetic algorithm is a better approach than other methods that treat the two problems separately. Analysis of our log BB model suggests that carboxylic acid group, polar surface area (PSA/hydrogen-bonding ability, lipophilicity, and molecular charge play important role in BBB penetration. Among those properties relevant to BBB penetration, lipophilicity could enhance the BBB penetration while all the others are negatively correlated with BBB penetration.

  8. Improved feature selection based on genetic algorithms for real time disruption prediction on JET

    Energy Technology Data Exchange (ETDEWEB)

    Ratta, G.A., E-mail: garatta@gateme.unsj.edu.ar [GATEME, Facultad de Ingenieria, Universidad Nacional de San Juan, Avda. San Martin 1109 (O), 5400 San Juan (Argentina); JET EFDA, Culham Science Centre, OX14 3DB Abingdon (United Kingdom); Vega, J. [Asociacion EURATOM/CIEMAT para Fusion, Avda. Complutense, 40, 28040 Madrid (Spain); JET EFDA, Culham Science Centre, OX14 3DB Abingdon (United Kingdom); Murari, A. [Associazione EURATOM-ENEA per la Fusione, Consorzio RFX, 4-35127 Padova (Italy); JET EFDA, Culham Science Centre, OX14 3DB Abingdon (United Kingdom)

    2012-09-15

    Highlights: Black-Right-Pointing-Pointer A new signal selection methodology to improve disruption prediction is reported. Black-Right-Pointing-Pointer The approach is based on Genetic Algorithms. Black-Right-Pointing-Pointer An advanced predictor has been created with the new set of signals. Black-Right-Pointing-Pointer The new system obtains considerably higher prediction rates. - Abstract: The early prediction of disruptions is an important aspect of the research in the field of Tokamak control. A very recent predictor, called 'Advanced Predictor Of Disruptions' (APODIS), developed for the 'Joint European Torus' (JET), implements the real time recognition of incoming disruptions with the best success rate achieved ever and an outstanding stability for long periods following training. In this article, a new methodology to select the set of the signals' parameters in order to maximize the performance of the predictor is reported. The approach is based on 'Genetic Algorithms' (GAs). With the feature selection derived from GAs, a new version of APODIS has been developed. The results are significantly better than the previous version not only in terms of success rates but also in extending the interval before the disruption in which reliable predictions are achieved. Correct disruption predictions with a success rate in excess of 90% have been achieved 200 ms before the time of the disruption. The predictor response is compared with that of JET's Protection System (JPS) and the ADODIS predictor is shown to be far superior. Both systems have been carefully tested with a wide number of discharges to understand their relative merits and the most profitable directions of further improvements.

  9. Application of genetic algorithm - multiple linear regressions to predict the activity of RSK inhibitors

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    Avval Zhila Mohajeri

    2015-01-01

    Full Text Available This paper deals with developing a linear quantitative structure-activity relationship (QSAR model for predicting the RSK inhibition activity of some new compounds. A dataset consisting of 62 pyrazino [1,2-α] indole, diazepino [1,2-α] indole, and imidazole derivatives with known inhibitory activities was used. Multiple linear regressions (MLR technique combined with the stepwise (SW and the genetic algorithm (GA methods as variable selection tools was employed. For more checking stability, robustness and predictability of the proposed models, internal and external validation techniques were used. Comparison of the results obtained, indicate that the GA-MLR model is superior to the SW-MLR model and that it isapplicable for designing novel RSK inhibitors.

  10. A combination of compositional index and genetic algorithm for predicting transmembrane helical segments.

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    Nazar Zaki

    Full Text Available Transmembrane helix (TMH topology prediction is becoming a focal problem in bioinformatics because the structure of TM proteins is difficult to determine using experimental methods. Therefore, methods that can computationally predict the topology of helical membrane proteins are highly desirable. In this paper we introduce TMHindex, a method for detecting TMH segments using only the amino acid sequence information. Each amino acid in a protein sequence is represented by a Compositional Index, which is deduced from a combination of the difference in amino acid occurrences in TMH and non-TMH segments in training protein sequences and the amino acid composition information. Furthermore, a genetic algorithm was employed to find the optimal threshold value for the separation of TMH segments from non-TMH segments. The method successfully predicted 376 out of the 378 TMH segments in a dataset consisting of 70 test protein sequences. The sensitivity and specificity for classifying each amino acid in every protein sequence in the dataset was 0.901 and 0.865, respectively. To assess the generality of TMHindex, we also tested the approach on another standard 73-protein 3D helix dataset. TMHindex correctly predicted 91.8% of proteins based on TM segments. The level of the accuracy achieved using TMHindex in comparison to other recent approaches for predicting the topology of TM proteins is a strong argument in favor of our proposed method.The datasets, software together with supplementary materials are available at: http://faculty.uaeu.ac.ae/nzaki/TMHindex.htm.

  11. Improved feature selection based on genetic algorithms for real time disruption prediction on JET

    International Nuclear Information System (INIS)

    Rattá, G.A.; Vega, J.; Murari, A.

    2012-01-01

    Highlights: ► A new signal selection methodology to improve disruption prediction is reported. ► The approach is based on Genetic Algorithms. ► An advanced predictor has been created with the new set of signals. ► The new system obtains considerably higher prediction rates. - Abstract: The early prediction of disruptions is an important aspect of the research in the field of Tokamak control. A very recent predictor, called “Advanced Predictor Of Disruptions” (APODIS), developed for the “Joint European Torus” (JET), implements the real time recognition of incoming disruptions with the best success rate achieved ever and an outstanding stability for long periods following training. In this article, a new methodology to select the set of the signals’ parameters in order to maximize the performance of the predictor is reported. The approach is based on “Genetic Algorithms” (GAs). With the feature selection derived from GAs, a new version of APODIS has been developed. The results are significantly better than the previous version not only in terms of success rates but also in extending the interval before the disruption in which reliable predictions are achieved. Correct disruption predictions with a success rate in excess of 90% have been achieved 200 ms before the time of the disruption. The predictor response is compared with that of JET's Protection System (JPS) and the ADODIS predictor is shown to be far superior. Both systems have been carefully tested with a wide number of discharges to understand their relative merits and the most profitable directions of further improvements.

  12. Design of artificial neural networks using a genetic algorithm to predict collection efficiency in venturi scrubbers.

    Science.gov (United States)

    Taheri, Mahboobeh; Mohebbi, Ali

    2008-08-30

    In this study, a new approach for the auto-design of neural networks, based on a genetic algorithm (GA), has been used to predict collection efficiency in venturi scrubbers. The experimental input data, including particle diameter, throat gas velocity, liquid to gas flow rate ratio, throat hydraulic diameter, pressure drop across the venturi scrubber and collection efficiency as an output, have been used to create a GA-artificial neural network (ANN) model. The testing results from the model are in good agreement with the experimental data. Comparison of the results of the GA optimized ANN model with the results from the trial-and-error calibrated ANN model indicates that the GA-ANN model is more efficient. Finally, the effects of operating parameters such as liquid to gas flow rate ratio, throat gas velocity, and particle diameter on collection efficiency were determined.

  13. Prediction of Aerodynamic Coefficient using Genetic Algorithm Optimized Neural Network for Sparse Data

    Science.gov (United States)

    Rajkumar, T.; Bardina, Jorge; Clancy, Daniel (Technical Monitor)

    2002-01-01

    Wind tunnels use scale models to characterize aerodynamic coefficients, Wind tunnel testing can be slow and costly due to high personnel overhead and intensive power utilization. Although manual curve fitting can be done, it is highly efficient to use a neural network to define the complex relationship between variables. Numerical simulation of complex vehicles on the wide range of conditions required for flight simulation requires static and dynamic data. Static data at low Mach numbers and angles of attack may be obtained with simpler Euler codes. Static data of stalled vehicles where zones of flow separation are usually present at higher angles of attack require Navier-Stokes simulations which are costly due to the large processing time required to attain convergence. Preliminary dynamic data may be obtained with simpler methods based on correlations and vortex methods; however, accurate prediction of the dynamic coefficients requires complex and costly numerical simulations. A reliable and fast method of predicting complex aerodynamic coefficients for flight simulation I'S presented using a neural network. The training data for the neural network are derived from numerical simulations and wind-tunnel experiments. The aerodynamic coefficients are modeled as functions of the flow characteristics and the control surfaces of the vehicle. The basic coefficients of lift, drag and pitching moment are expressed as functions of angles of attack and Mach number. The modeled and training aerodynamic coefficients show good agreement. This method shows excellent potential for rapid development of aerodynamic models for flight simulation. Genetic Algorithms (GA) are used to optimize a previously built Artificial Neural Network (ANN) that reliably predicts aerodynamic coefficients. Results indicate that the GA provided an efficient method of optimizing the ANN model to predict aerodynamic coefficients. The reliability of the ANN using the GA includes prediction of aerodynamic

  14. A hybrid genetic algorithm and linear regression for prediction of NOx emission in power generation plant

    International Nuclear Information System (INIS)

    Bunyamin, Muhammad Afif; Yap, Keem Siah; Aziz, Nur Liyana Afiqah Abdul; Tiong, Sheih Kiong; Wong, Shen Yuong; Kamal, Md Fauzan

    2013-01-01

    This paper presents a new approach of gas emission estimation in power generation plant using a hybrid Genetic Algorithm (GA) and Linear Regression (LR) (denoted as GA-LR). The LR is one of the approaches that model the relationship between an output dependant variable, y, with one or more explanatory variables or inputs which denoted as x. It is able to estimate unknown model parameters from inputs data. On the other hand, GA is used to search for the optimal solution until specific criteria is met causing termination. These results include providing good solutions as compared to one optimal solution for complex problems. Thus, GA is widely used as feature selection. By combining the LR and GA (GA-LR), this new technique is able to select the most important input features as well as giving more accurate prediction by minimizing the prediction errors. This new technique is able to produce more consistent of gas emission estimation, which may help in reducing population to the environment. In this paper, the study's interest is focused on nitrous oxides (NOx) prediction. The results of the experiment are encouraging.

  15. Predicting the severity of nuclear power plant transients using nearest neighbors modeling optimized by genetic algorithms on a parallel computer

    International Nuclear Information System (INIS)

    Lin, J.; Bartal, Y.; Uhrig, R.E.

    1995-01-01

    The importance of automatic diagnostic systems for nuclear power plants (NPPs) has been discussed in numerous studies, and various such systems have been proposed. None of those systems were designed to predict the severity of the diagnosed scenario. A classification and severity prediction system for NPP transients is developed. The system is based on nearest neighbors modeling, which is optimized using genetic algorithms. The optimization process is used to determine the most important variables for each of the transient types analyzed. An enhanced version of the genetic algorithms is used in which a local downhill search is performed to further increase the accuracy achieved. The genetic algorithms search was implemented on a massively parallel supercomputer, the KSR1-64, to perform the analysis in a reasonable time. The data for this study were supplied by the high-fidelity simulator of the San Onofre unit 1 pressurized water reactor

  16. Prediction and optimization of thinning in automotive sealing cover using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Ganesh M. Kakandikar

    2016-01-01

    Full Text Available Deep drawing is a forming process in which a blank of sheet metal is radially drawn into a forming die by the mechanical action of a punch and converted to required shape. Deep drawing involves complex material flow conditions and force distributions. Radial drawing stresses and tangential compressive stresses are induced in flange region due to the material retention property. These compressive stresses result in wrinkling phenomenon in flange region. Normally blank holder is applied for restricting wrinkles. Tensile stresses in radial direction initiate thinning in the wall region of cup. The thinning results into cracking or fracture. The finite element method is widely applied worldwide to simulate the deep drawing process. For real-life simulations of deep drawing process an accurate numerical model, as well as an accurate description of material behavior and contact conditions, is necessary. The finite element method is a powerful tool to predict material thinning deformations before prototypes are made. The proposed innovative methodology combines two techniques for prediction and optimization of thinning in automotive sealing cover. Taguchi design of experiments and analysis of variance has been applied to analyze the influencing process parameters on Thinning. Mathematical relations have been developed to correlate input process parameters and Thinning. Optimization problem has been formulated for thinning and Genetic Algorithm has been applied for optimization. Experimental validation of results proves the applicability of newly proposed approach. The optimized component when manufactured is observed to be safe, no thinning or fracture is observed.

  17. PREDICTIVE CONTROL OF A BATCH POLYMERIZATION SYSTEM USING A FEEDFORWARD NEURAL NETWORK WITH ONLINE ADAPTATION BY GENETIC ALGORITHM

    OpenAIRE

    Cancelier, A.; Claumann, C. A.; Bolzan, A.; Machado, R. A. F.

    2016-01-01

    Abstract This study used a predictive controller based on an empirical nonlinear model comprising a three-layer feedforward neural network for temperature control of the suspension polymerization process. In addition to the offline training technique, an algorithm was also analyzed for online adaptation of its parameters. For the offline training, the network was statically trained and the genetic algorithm technique was used in combination with the least squares method. For online training, ...

  18. Predicting recurrent aphthous ulceration using genetic algorithms-optimized neural networks

    Directory of Open Access Journals (Sweden)

    Najla S Dar-Odeh

    2010-05-01

    Full Text Available Najla S Dar-Odeh1, Othman M Alsmadi2, Faris Bakri3, Zaer Abu-Hammour2, Asem A Shehabi3, Mahmoud K Al-Omiri1, Shatha M K Abu-Hammad4, Hamzeh Al-Mashni4, Mohammad B Saeed4, Wael Muqbil4, Osama A Abu-Hammad1 1Faculty of Dentistry, 2Faculty of Engineering and Technology, 3Faculty of Medicine, University of Jordan, Amman, Jordan; 4Dental Department, University of Jordan Hospital, Amman, JordanObjective: To construct and optimize a neural network that is capable of predicting the occurrence of recurrent aphthous ulceration (RAU based on a set of appropriate input data.Participants and methods: Artificial neural networks (ANN software employing genetic algorithms to optimize the architecture neural networks was used. Input and output data of 86 participants (predisposing factors and status of the participants with regards to recurrent aphthous ulceration were used to construct and train the neural networks. The optimized neural networks were then tested using untrained data of a further 10 participants.Results: The optimized neural network, which produced the most accurate predictions for the presence or absence of recurrent aphthous ulceration was found to employ: gender, hematological (with or without ferritin and mycological data of the participants, frequency of tooth brushing, and consumption of vegetables and fruits.Conclusions: Factors appearing to be related to recurrent aphthous ulceration and appropriate for use as input data to construct ANNs that predict recurrent aphthous ulceration were found to include the following: gender, hemoglobin, serum vitamin B12, serum ferritin, red cell folate, salivary candidal colony count, frequency of tooth brushing, and the number of fruits or vegetables consumed daily.Keywords: artifical neural networks, recurrent, aphthous ulceration, ulcer

  19. Mixing Energy Models in Genetic Algorithms for On-Lattice Protein Structure Prediction

    Directory of Open Access Journals (Sweden)

    Mahmood A. Rashid

    2013-01-01

    Full Text Available Protein structure prediction (PSP is computationally a very challenging problem. The challenge largely comes from the fact that the energy function that needs to be minimised in order to obtain the native structure of a given protein is not clearly known. A high resolution 20×20 energy model could better capture the behaviour of the actual energy function than a low resolution energy model such as hydrophobic polar. However, the fine grained details of the high resolution interaction energy matrix are often not very informative for guiding the search. In contrast, a low resolution energy model could effectively bias the search towards certain promising directions. In this paper, we develop a genetic algorithm that mainly uses a high resolution energy model for protein structure evaluation but uses a low resolution HP energy model in focussing the search towards exploring structures that have hydrophobic cores. We experimentally show that this mixing of energy models leads to significant lower energy structures compared to the state-of-the-art results.

  20. BP neural network optimized by genetic algorithm approach for titanium and iron content prediction in EDXRF

    International Nuclear Information System (INIS)

    Wang Jun; Liu Mingzhe; Li Zhe; Li Lei; Shi Rui; Tuo Xianguo

    2015-01-01

    The quantitative elemental content analysis is difficult due to the uniform effect, particle effect and the element matrix effect, etc, when using energy dispersive X-ray fluorescence (EDXRF) technique. In this paper, a hybrid approach of genetic algorithm (GA) and back propagation (BP) neural network was proposed without considering the complex relationship between the concentration and intensity. The aim of GA optimized BP was to get better network initial weights and thresholds. The basic idea was that the reciprocal of the mean square error of the initialization BP neural network was set as the fitness value of the individual in GA, and the initial weights and thresholds were replaced by individuals, and then the optimal individual was sought by selection, crossover and mutation operations, finally a new BP neural network model was created with the optimal initial weights and thresholds. The calculation results of quantitative analysis of titanium and iron contents for five types of ore bodies in Panzhihua Mine show that the results of classification prediction are far better than that of overall forecasting, and relative errors of 76.7% samples are less than 2% compared with chemical analysis values, which demonstrates the effectiveness of the proposed method. (authors)

  1. Genetic Algorithms for Estimating Effective Parameters in a Lumped Reactor Model for Reactivity Predictions

    International Nuclear Information System (INIS)

    Marseguerra, Marzio; Zio, Enrico

    2001-01-01

    The control system of a reactor should be able to predict, in real time, the amount of reactivity to be inserted (e.g., by control rod movements and boron injection and dilution) to respond to a given electrical load demand or to undesired, accidental transients. The real-time constraint renders impractical the use of a large, detailed dynamic reactor code. One has, then, to resort to simplified analytical models with lumped effective parameters suitably estimated from the reactor data.The simple and well-known Chernick model for describing the reactor power evolution in the presence of xenon is considered and the feasibility of using genetic algorithms for estimating the effective nuclear parameters involved and the initial nonmeasurable xenon and iodine conditions is investigated. This approach has the advantage of counterbalancing the inherent model simplicity with the periodic reestimation of the effective parameter values pertaining to each reactor on the basis of its recent history. By so doing, other effects, such as burnup, are automatically taken into account

  2. Hyperparameter Optimization of Artificial Neural Network in Customer Churn Prediction using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Martin Fridrich

    2017-06-01

    Full Text Available Purpose of the article: The ability of the company to predict customer churn and retain customers is considered to be worthy competitive advantage since it improves cost allocation in customer retention programs, retaining future revenue and profits. In addition, it has several positive indirect impacts such as increasing customer’s loyalty. Therefore, the focus of the article is on building highly reliable and robust classification model, which deals with such a task. Methodology/methods: The analysis is carried out on labelled ecommerce retail dataset describing 10 000 most valuable customers with the highest CLV (Customer Lifetime Value. To obtain the best performing ANN (Artificial Neural Network classification model, proposed hyperparameter search space is explored with genetic algorithm to find suitable parameter settings. ANN classification performance is measured with regard to prediction ability, which is understood as point estimate of AUC (Area Under Curve mean on 4fold cross-validation set. Explored part of hyperparameter search space is analyzed with conditional inference tree structure addressing underlying fundamental context of given optimization which results in identification of critical factors leading to well performing ANN classification model. Scientific aim: To present and execute experimental design for performance evaluation and hyperparameter optimization of classification models, which are used for customer churn prediction. Findings: It is concluded and statistically proven that in experimental context described, regularization parameter as well as training function have significant influence on classifiers AUC performance contrasting other properties of ANN. More specifically, well performing ANN classification models have regularization parameter set to 0, adaptation function set to trainlm or trainscg and more than 100 training epochs. Global optimum is identified for solution with regularization parameter set to

  3. A grand canonical genetic algorithm for the prediction of multi-component phase diagrams and testing of empirical potentials

    International Nuclear Information System (INIS)

    Tipton, William W; Hennig, Richard G

    2013-01-01

    We present an evolutionary algorithm which predicts stable atomic structures and phase diagrams by searching the energy landscape of empirical and ab initio Hamiltonians. Composition and geometrical degrees of freedom may be varied simultaneously. We show that this method utilizes information from favorable local structure at one composition to predict that at others, achieving far greater efficiency of phase diagram prediction than a method which relies on sampling compositions individually. We detail this and a number of other efficiency-improving techniques implemented in the genetic algorithm for structure prediction code that is now publicly available. We test the efficiency of the software by searching the ternary Zr–Cu–Al system using an empirical embedded-atom model potential. In addition to testing the algorithm, we also evaluate the accuracy of the potential itself. We find that the potential stabilizes several correct ternary phases, while a few of the predicted ground states are unphysical. Our results suggest that genetic algorithm searches can be used to improve the methodology of empirical potential design. (paper)

  4. A grand canonical genetic algorithm for the prediction of multi-component phase diagrams and testing of empirical potentials.

    Science.gov (United States)

    Tipton, William W; Hennig, Richard G

    2013-12-11

    We present an evolutionary algorithm which predicts stable atomic structures and phase diagrams by searching the energy landscape of empirical and ab initio Hamiltonians. Composition and geometrical degrees of freedom may be varied simultaneously. We show that this method utilizes information from favorable local structure at one composition to predict that at others, achieving far greater efficiency of phase diagram prediction than a method which relies on sampling compositions individually. We detail this and a number of other efficiency-improving techniques implemented in the genetic algorithm for structure prediction code that is now publicly available. We test the efficiency of the software by searching the ternary Zr-Cu-Al system using an empirical embedded-atom model potential. In addition to testing the algorithm, we also evaluate the accuracy of the potential itself. We find that the potential stabilizes several correct ternary phases, while a few of the predicted ground states are unphysical. Our results suggest that genetic algorithm searches can be used to improve the methodology of empirical potential design.

  5. Optimization the Initial Weights of Artificial Neural Networks via Genetic Algorithm Applied to Hip Bone Fracture Prediction

    Directory of Open Access Journals (Sweden)

    Yu-Tzu Chang

    2012-01-01

    Full Text Available This paper aims to find the optimal set of initial weights to enhance the accuracy of artificial neural networks (ANNs by using genetic algorithms (GA. The sample in this study included 228 patients with first low-trauma hip fracture and 215 patients without hip fracture, both of them were interviewed with 78 questions. We used logistic regression to select 5 important factors (i.e., bone mineral density, experience of fracture, average hand grip strength, intake of coffee, and peak expiratory flow rate for building artificial neural networks to predict the probabilities of hip fractures. Three-layer (one hidden layer ANNs models with back-propagation training algorithms were adopted. The purpose in this paper is to find the optimal initial weights of neural networks via genetic algorithm to improve the predictability. Area under the ROC curve (AUC was used to assess the performance of neural networks. The study results showed the genetic algorithm obtained an AUC of 0.858±0.00493 on modeling data and 0.802 ± 0.03318 on testing data. They were slightly better than the results of our previous study (0.868±0.00387 and 0.796±0.02559, resp.. Thus, the preliminary study for only using simple GA has been proved to be effective for improving the accuracy of artificial neural networks.

  6. Where genetic algorithms excel.

    Science.gov (United States)

    Baum, E B; Boneh, D; Garrett, C

    2001-01-01

    We analyze the performance of a genetic algorithm (GA) we call Culling, and a variety of other algorithms, on a problem we refer to as the Additive Search Problem (ASP). We show that the problem of learning the Ising perceptron is reducible to a noisy version of ASP. Noisy ASP is the first problem we are aware of where a genetic-type algorithm bests all known competitors. We generalize ASP to k-ASP to study whether GAs will achieve "implicit parallelism" in a problem with many more schemata. GAs fail to achieve this implicit parallelism, but we describe an algorithm we call Explicitly Parallel Search that succeeds. We also compute the optimal culling point for selective breeding, which turns out to be independent of the fitness function or the population distribution. We also analyze a mean field theoretic algorithm performing similarly to Culling on many problems. These results provide insight into when and how GAs can beat competing methods.

  7. Feature selection for disruption prediction from scratch in JET by using genetic algorithms and probabilistic predictors

    Energy Technology Data Exchange (ETDEWEB)

    Pereira, Augusto, E-mail: augusto.pereira@ciemat.es [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain); Vega, Jesús; Moreno, Raúl [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain); Dormido-Canto, Sebastián [Dpto. Informática y Automática – UNED, Madrid (Spain); Rattá, Giuseppe A. [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain); Pavón, Fernando [Dpto. Informática y Automática – UNED, Madrid (Spain)

    2015-10-15

    Recently, a probabilistic classifier has been developed at JET to be used as predictor from scratch. It has been applied to a database of 1237 JET ITER-like wall (ILW) discharges (of which 201 disrupted) with good results: success rate of 94% and false alarm rate of 4.21%. A combinatorial analysis between 14 features to ensure the selection of the best ones to achieve good enough results in terms of success rate and false alarm rate was performed. All possible combinations with a number of features between 2 and 7 were tested and 9893 different predictors were analyzed. An important drawback in this analysis was the time required to compute the results that can be estimated in 1731 h (∼2.4 months). Genetic algorithms (GA) are searching algorithms that simulate the process of natural selection. In this article, the GA and the Venn predictors are combined with the objective not only of finding good enough features within the 14 available ones but also of reducing the computational time requirements. Five different performance metrics as measures of the GA fitness function have been evaluated. The best metric was the measurement called Informedness, with just 6 generations (168 predictors at 29.4 h).

  8. Feature selection for disruption prediction from scratch in JET by using genetic algorithms and probabilistic predictors

    International Nuclear Information System (INIS)

    Pereira, Augusto; Vega, Jesús; Moreno, Raúl; Dormido-Canto, Sebastián; Rattá, Giuseppe A.; Pavón, Fernando

    2015-01-01

    Recently, a probabilistic classifier has been developed at JET to be used as predictor from scratch. It has been applied to a database of 1237 JET ITER-like wall (ILW) discharges (of which 201 disrupted) with good results: success rate of 94% and false alarm rate of 4.21%. A combinatorial analysis between 14 features to ensure the selection of the best ones to achieve good enough results in terms of success rate and false alarm rate was performed. All possible combinations with a number of features between 2 and 7 were tested and 9893 different predictors were analyzed. An important drawback in this analysis was the time required to compute the results that can be estimated in 1731 h (∼2.4 months). Genetic algorithms (GA) are searching algorithms that simulate the process of natural selection. In this article, the GA and the Venn predictors are combined with the objective not only of finding good enough features within the 14 available ones but also of reducing the computational time requirements. Five different performance metrics as measures of the GA fitness function have been evaluated. The best metric was the measurement called Informedness, with just 6 generations (168 predictors at 29.4 h).

  9. PREDICTIVE CONTROL OF A BATCH POLYMERIZATION SYSTEM USING A FEEDFORWARD NEURAL NETWORK WITH ONLINE ADAPTATION BY GENETIC ALGORITHM

    Directory of Open Access Journals (Sweden)

    A. Cancelier

    Full Text Available Abstract This study used a predictive controller based on an empirical nonlinear model comprising a three-layer feedforward neural network for temperature control of the suspension polymerization process. In addition to the offline training technique, an algorithm was also analyzed for online adaptation of its parameters. For the offline training, the network was statically trained and the genetic algorithm technique was used in combination with the least squares method. For online training, the network was trained on a recurring basis and only the technique of genetic algorithms was used. In this case, only the weights and bias of the output layer neuron were modified, starting from the parameters obtained from the offline training. From the experimental results obtained in a pilot plant, a good performance was observed for the proposed control system, with superior performance for the control algorithm with online adaptation of the model, particularly with respect to the presence of off-set for the case of the fixed parameters model.

  10. Load balancing prediction method of cloud storage based on analytic hierarchy process and hybrid hierarchical genetic algorithm.

    Science.gov (United States)

    Zhou, Xiuze; Lin, Fan; Yang, Lvqing; Nie, Jing; Tan, Qian; Zeng, Wenhua; Zhang, Nian

    2016-01-01

    With the continuous expansion of the cloud computing platform scale and rapid growth of users and applications, how to efficiently use system resources to improve the overall performance of cloud computing has become a crucial issue. To address this issue, this paper proposes a method that uses an analytic hierarchy process group decision (AHPGD) to evaluate the load state of server nodes. Training was carried out by using a hybrid hierarchical genetic algorithm (HHGA) for optimizing a radial basis function neural network (RBFNN). The AHPGD makes the aggregative indicator of virtual machines in cloud, and become input parameters of predicted RBFNN. Also, this paper proposes a new dynamic load balancing scheduling algorithm combined with a weighted round-robin algorithm, which uses the predictive periodical load value of nodes based on AHPPGD and RBFNN optimized by HHGA, then calculates the corresponding weight values of nodes and makes constant updates. Meanwhile, it keeps the advantages and avoids the shortcomings of static weighted round-robin algorithm.

  11. Reconstruction of DNA sequences using genetic algorithms and cellular automata: towards mutation prediction?

    Science.gov (United States)

    Mizas, Ch; Sirakoulis, G Ch; Mardiris, V; Karafyllidis, I; Glykos, N; Sandaltzopoulos, R

    2008-04-01

    Change of DNA sequence that fuels evolution is, to a certain extent, a deterministic process because mutagenesis does not occur in an absolutely random manner. So far, it has not been possible to decipher the rules that govern DNA sequence evolution due to the extreme complexity of the entire process. In our attempt to approach this issue we focus solely on the mechanisms of mutagenesis and deliberately disregard the role of natural selection. Hence, in this analysis, evolution refers to the accumulation of genetic alterations that originate from mutations and are transmitted through generations without being subjected to natural selection. We have developed a software tool that allows modelling of a DNA sequence as a one-dimensional cellular automaton (CA) with four states per cell which correspond to the four DNA bases, i.e. A, C, T and G. The four states are represented by numbers of the quaternary number system. Moreover, we have developed genetic algorithms (GAs) in order to determine the rules of CA evolution that simulate the DNA evolution process. Linear evolution rules were considered and square matrices were used to represent them. If DNA sequences of different evolution steps are available, our approach allows the determination of the underlying evolution rule(s). Conversely, once the evolution rules are deciphered, our tool may reconstruct the DNA sequence in any previous evolution step for which the exact sequence information was unknown. The developed tool may be used to test various parameters that could influence evolution. We describe a paradigm relying on the assumption that mutagenesis is governed by a near-neighbour-dependent mechanism. Based on the satisfactory performance of our system in the deliberately simplified example, we propose that our approach could offer a starting point for future attempts to understand the mechanisms that govern evolution. The developed software is open-source and has a user-friendly graphical input interface.

  12. Foundations of genetic algorithms 1991

    CERN Document Server

    1991-01-01

    Foundations of Genetic Algorithms 1991 (FOGA 1) discusses the theoretical foundations of genetic algorithms (GA) and classifier systems.This book compiles research papers on selection and convergence, coding and representation, problem hardness, deception, classifier system design, variation and recombination, parallelization, and population divergence. Other topics include the non-uniform Walsh-schema transform; spurious correlations and premature convergence in genetic algorithms; and variable default hierarchy separation in a classifier system. The grammar-based genetic algorithm; condition

  13. Prediction of composite fatigue life under variable amplitude loading using artificial neural network trained by genetic algorithm

    Science.gov (United States)

    Rohman, Muhamad Nur; Hidayat, Mas Irfan P.; Purniawan, Agung

    2018-04-01

    Neural networks (NN) have been widely used in application of fatigue life prediction. In the use of fatigue life prediction for polymeric-base composite, development of NN model is necessary with respect to the limited fatigue data and applicable to be used to predict the fatigue life under varying stress amplitudes in the different stress ratios. In the present paper, Multilayer-Perceptrons (MLP) model of neural network is developed, and Genetic Algorithm was employed to optimize the respective weights of NN for prediction of polymeric-base composite materials under variable amplitude loading. From the simulation result obtained with two different composite systems, named E-glass fabrics/epoxy (layups [(±45)/(0)2]S), and E-glass/polyester (layups [90/0/±45/0]S), NN model were trained with fatigue data from two different stress ratios, which represent limited fatigue data, can be used to predict another four and seven stress ratios respectively, with high accuracy of fatigue life prediction. The accuracy of NN prediction were quantified with the small value of mean square error (MSE). When using 33% from the total fatigue data for training, the NN model able to produce high accuracy for all stress ratios. When using less fatigue data during training (22% from the total fatigue data), the NN model still able to produce high coefficient of determination between the prediction result compared with obtained by experiment.

  14. ANFIS-based genetic algorithm for predicting the optimal sizing coefficient of photovoltaic supply systems

    Energy Technology Data Exchange (ETDEWEB)

    Mellit, A. [Medea Univ., Medea (Algeria). Inst. of Science Engineering, Dept. of Electronics

    2007-07-01

    Stand-alone photovoltaic (PV) power supply systems are regarded as reliable and economical sources of electricity in rural remote areas, particularly in developing countries. However, the sizing of stand-alone photovoltaic (PV) systems is an important part of the system design. Choosing the optimal number of solar cell panels and the size of the storage battery to be used for a certain application at a particular site is an important economical problem. In this paper, a genetic algorithm (GA) and an adaptive neuro-fuzzy inference scheme (ANFIS) were proposed as a means for determining the optimal size of PV system, particularly, in isolated areas. The GA-ANFIS model was shown to be suitable for modelling the optimal sizing parameters of PVS systems. The GA was used to determine the PV-array capacity and the storage capacity for 60 sites. From this database, 56 pairs relative to 56 sites were used for training the network. Four pairs were used for testing and validating the ANFIS model. A correlation of 99 per cent was achieved when complete unknown data parameters were presented to the model. The proposed technique provided more accurate results than the alternative artificial neural network (ANN) with GA. The advantage of this model was that it could estimate the PV-array area and the useful capacity of the battery from only geographical coordinates. Although the technique was applied and tested in Algeria, it can be generalized for any location in the world. 15 refs., 4 tabs., 8 figs.

  15. Prediction and optimization of fuel cell performance using a multi-objective genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Marques Hobold, Gustavo [Laboratory of Energy Conversion Engineering and Technology, Federal University of Santa Catarina (Brazil); Washington University in St. Louis, MO 63130 (United States); Agarwal, Ramesh K. [Department of Mechanical Engineering and Materials Science, Washington University in St. Louis, MO 63130 (United States)

    2013-07-01

    The attention that is currently being given to the emission of pollutant gases in the atmosphere has made the fuel cell (FC), an energy conversion device that cleanly converts chemical energy into electrical energy, a good alternative to other technologies that still use carbon-based fuels. The temperature plays an important role on the efficiency of an FC as it influences directly the humidity of the membrane, the reversible thermodynamic potential and the partial pressure of water; therefore the thermal control of the fuel cell is the focus of this paper. We present models for both high and low temperature fuel cells based on the solid-oxide fuel cell (SOFC) and the polymer electrolyte membrane fuel cell (PEMFC). A thermodynamic analysis is performed on the cells and the methods of controlling their temperature are discussed. The cell parameters are optimized for both high and low temperatures using a Java-based multi-objective genetic algorithm, which makes use of the logic of the biological theory of evolution to classify individual parameters based on a fitness function in order to maximize the power of the fuel cell. Applications to high and low temperature fuel cells are discussed.

  16. Prediction of China's coal production-environmental pollution based on a hybrid genetic algorithm-system dynamics model

    International Nuclear Information System (INIS)

    Yu Shiwei; Wei Yiming

    2012-01-01

    This paper proposes a hybrid model based on genetic algorithm (GA) and system dynamics (SD) for coal production–environmental pollution load in China. GA has been utilized in the optimization of the parameters of the SD model to reduce implementation subjectivity. The chain of “Economic development–coal demand–coal production–environmental pollution load” of China in 2030 was predicted, and scenarios were analyzed. Results show that: (1) GA performs well in optimizing the parameters of the SD model objectively and in simulating the historical data; (2) The demand for coal energy continuously increases, although the coal intensity has actually decreased because of China's persistent economic development. Furthermore, instead of reaching a turning point by 2030, the environmental pollution load continuously increases each year even under the scenario where coal intensity decreased by 20% and investment in pollution abatement increased by 20%; (3) For abating the amount of “three types of wastes”, reducing the coal intensity is more effective than reducing the polluted production per tonne of coal and increasing investment in pollution control. - Highlights: ► We propos a GA-SD model for China's coal production-pollution prediction. ► Genetic algorithm (GA) can objectively and accurately optimize parameters of system dynamics (SD) model. ► Environmental pollution in China is projected to grow in our scenarios by 2030. ► The mechanism of reducing waste production per tonne of coal mining is more effective than others.

  17. Genetic algorithms for protein threading.

    Science.gov (United States)

    Yadgari, J; Amir, A; Unger, R

    1998-01-01

    Despite many years of efforts, a direct prediction of protein structure from sequence is still not possible. As a result, in the last few years researchers have started to address the "inverse folding problem": Identifying and aligning a sequence to the fold with which it is most compatible, a process known as "threading". In two meetings in which protein folding predictions were objectively evaluated, it became clear that threading as a concept promises a real breakthrough, but that much improvement is still needed in the technique itself. Threading is a NP-hard problem, and thus no general polynomial solution can be expected. Still a practical approach with demonstrated ability to find optimal solutions in many cases, and acceptable solutions in other cases, is needed. We applied the technique of Genetic Algorithms in order to significantly improve the ability of threading algorithms to find the optimal alignment of a sequence to a structure, i.e. the alignment with the minimum free energy. A major progress reported here is the design of a representation of the threading alignment as a string of fixed length. With this representation validation of alignments and genetic operators are effectively implemented. Appropriate data structure and parameters have been selected. It is shown that Genetic Algorithm threading is effective and is able to find the optimal alignment in a few test cases. Furthermore, the described algorithm is shown to perform well even without pre-definition of core elements. Existing threading methods are dependent on such constraints to make their calculations feasible. But the concept of core elements is inherently arbitrary and should be avoided if possible. While a rigorous proof is hard to submit yet an, we present indications that indeed Genetic Algorithm threading is capable of finding consistently good solutions of full alignments in search spaces of size up to 10(70).

  18. Genetic algorithm essentials

    CERN Document Server

    Kramer, Oliver

    2017-01-01

    This book introduces readers to genetic algorithms (GAs) with an emphasis on making the concepts, algorithms, and applications discussed as easy to understand as possible. Further, it avoids a great deal of formalisms and thus opens the subject to a broader audience in comparison to manuscripts overloaded by notations and equations. The book is divided into three parts, the first of which provides an introduction to GAs, starting with basic concepts like evolutionary operators and continuing with an overview of strategies for tuning and controlling parameters. In turn, the second part focuses on solution space variants like multimodal, constrained, and multi-objective solution spaces. Lastly, the third part briefly introduces theoretical tools for GAs, the intersections and hybridizations with machine learning, and highlights selected promising applications.

  19. From Genetics to Genetic Algorithms

    Indian Academy of Sciences (India)

    artificial genetic system) string feature or ... called the genotype whereas it is called a structure in artificial genetic ... assigned a fitness value based on the cost function. Better ..... way it has produced complex, intelligent living organisms capable of ...

  20. Prediction of air-to-blood partition coefficients of volatile organic compounds using genetic algorithm and artificial neural network

    International Nuclear Information System (INIS)

    Konoz, Elahe; Golmohammadi, Hassan

    2008-01-01

    An artificial neural network (ANN) was constructed and trained for the prediction of air-to-blood partition coefficients of volatile organic compounds. The inputs of this neural network are theoretically derived descriptors that were chosen by genetic algorithm (GA) and multiple linear regression (MLR) features selection techniques. These descriptors are: R maximal autocorrelation of lag 1 weighted by atomic Sanderson electronegativities (R1E+), electron density on the most negative atom in molecule (EDNA), maximum partial charge for C atom (MXPCC), surface weighted charge partial surface area (WNSA1), fractional charge partial surface area (FNSA2) and atomic charge weighted partial positive surface area (PPSA3). The standard errors of training, test and validation sets for the ANN model are 0.095, 0.148 and 0.120, respectively. Result obtained showed that nonlinear model can simulate the relationship between structural descriptors and the partition coefficients of the molecules in data set accurately

  1. Artificial neural network analysis based on genetic algorithm to predict the performance characteristics of a cross flow cooling tower

    Science.gov (United States)

    Wu, Jiasheng; Cao, Lin; Zhang, Guoqiang

    2018-02-01

    Cooling tower of air conditioning has been widely used as cooling equipment, and there will be broad application prospect if it can be reversibly used as heat source under heat pump heating operation condition. In view of the complex non-linear relationship of each parameter in the process of heat and mass transfer inside tower, In this paper, the BP neural network model based on genetic algorithm optimization (GABP neural network model) is established for the reverse use of cross flow cooling tower. The model adopts the structure of 6 inputs, 13 hidden nodes and 8 outputs. With this model, the outlet air dry bulb temperature, wet bulb temperature, water temperature, heat, sensible heat ratio and heat absorbing efficiency, Lewis number, a total of 8 the proportion of main performance parameters were predicted. Furthermore, the established network model is used to predict the water temperature and heat absorption of the tower at different inlet temperatures. The mean relative error MRE between BP predicted value and experimental value are 4.47%, 3.63%, 2.38%, 3.71%, 6.35%,3.14%, 13.95% and 6.80% respectively; the mean relative error MRE between GABP predicted value and experimental value are 2.66%, 3.04%, 2.27%, 3.02%, 6.89%, 3.17%, 11.50% and 6.57% respectively. The results show that the prediction results of GABP network model are better than that of BP network model; the simulation results are basically consistent with the actual situation. The GABP network model can well predict the heat and mass transfer performance of the cross flow cooling tower.

  2. Applying Probability Theory for the Quality Assessment of a Wildfire Spread Prediction Framework Based on Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Andrés Cencerrado

    2013-01-01

    Full Text Available This work presents a framework for assessing how the existing constraints at the time of attending an ongoing forest fire affect simulation results, both in terms of quality (accuracy obtained and the time needed to make a decision. In the wildfire spread simulation and prediction area, it is essential to properly exploit the computational power offered by new computing advances. For this purpose, we rely on a two-stage prediction process to enhance the quality of traditional predictions, taking advantage of parallel computing. This strategy is based on an adjustment stage which is carried out by a well-known evolutionary technique: Genetic Algorithms. The core of this framework is evaluated according to the probability theory principles. Thus, a strong statistical study is presented and oriented towards the characterization of such an adjustment technique in order to help the operation managers deal with the two aspects previously mentioned: time and quality. The experimental work in this paper is based on a region in Spain which is one of the most prone to forest fires: El Cap de Creus.

  3. A Building Model Framework for a Genetic Algorithm Multi-objective Model Predictive Control

    DEFF Research Database (Denmark)

    Arendt, Krzysztof; Ionesi, Ana; Jradi, Muhyiddine

    2016-01-01

    Model Predictive Control (MPC) of building systems is a promising approach to optimize building energy performance. In contrast to traditional control strategies which are reactive in nature, MPC optimizes the utilization of resources based on the predicted effects. It has been shown that energy ...

  4. A Novel Multiscale Ensemble Carbon Price Prediction Model Integrating Empirical Mode Decomposition, Genetic Algorithm and Artificial Neural Network

    Directory of Open Access Journals (Sweden)

    Bangzhu Zhu

    2012-02-01

    Full Text Available Due to the movement and complexity of the carbon market, traditional monoscale forecasting approaches often fail to capture its nonstationary and nonlinear properties and accurately describe its moving tendencies. In this study, a multiscale ensemble forecasting model integrating empirical mode decomposition (EMD, genetic algorithm (GA and artificial neural network (ANN is proposed to forecast carbon price. Firstly, the proposed model uses EMD to decompose carbon price data into several intrinsic mode functions (IMFs and one residue. Then, the IMFs and residue are composed into a high frequency component, a low frequency component and a trend component which have similar frequency characteristics, simple components and strong regularity using the fine-to-coarse reconstruction algorithm. Finally, those three components are predicted using an ANN trained by GA, i.e., a GAANN model, and the final forecasting results can be obtained by the sum of these three forecasting results. For verification and testing, two main carbon future prices with different maturity in the European Climate Exchange (ECX are used to test the effectiveness of the proposed multiscale ensemble forecasting model. Empirical results obtained demonstrate that the proposed multiscale ensemble forecasting model can outperform the single random walk (RW, ARIMA, ANN and GAANN models without EMD preprocessing and the ensemble ARIMA model with EMD preprocessing.

  5. A Structurally Simplified Hybrid Model of Genetic Algorithm and Support Vector Machine for Prediction of Chlorophyll a in Reservoirs

    Directory of Open Access Journals (Sweden)

    Jieqiong Su

    2015-04-01

    Full Text Available With decreasing water availability as a result of climate change and human activities, analysis of the influential factors and variation trends of chlorophyll a has become important to prevent reservoir eutrophication and ensure water supply safety. In this paper, a structurally simplified hybrid model of the genetic algorithm (GA and the support vector machine (SVM was developed for the prediction of monthly concentration of chlorophyll a in the Miyun Reservoir of northern China over the period from 2000 to 2010. Based on the influence factor analysis, the four most relevant influence factors of chlorophyll a (i.e., total phosphorus, total nitrogen, permanganate index, and reservoir storage were extracted using the method of feature selection with the GA, which simplified the model structure, making it more practical and efficient for environmental management. The results showed that the developed simplified GA-SVM model could solve nonlinear problems of complex system, and was suitable for the simulation and prediction of chlorophyll a with better performance in accuracy and efficiency in the Miyun Reservoir.

  6. An investigation of genetic algorithms

    International Nuclear Information System (INIS)

    Douglas, S.R.

    1995-04-01

    Genetic algorithms mimic biological evolution by natural selection in their search for better individuals within a changing population. they can be used as efficient optimizers. This report discusses the developing field of genetic algorithms. It gives a simple example of the search process and introduces the concept of schema. It also discusses modifications to the basic genetic algorithm that result in species and niche formation, in machine learning and artificial evolution of computer programs, and in the streamlining of human-computer interaction. (author). 3 refs., 1 tab., 2 figs

  7. Optimization the initial weights of artificial neural networks via genetic algorithm applied to hip bone fracture prediction

    OpenAIRE

    Chang, Y-T; Lin, J; Shieh, J-S; Abbod, MF

    2012-01-01

    This paper aims to find the optimal set of initial weights to enhance the accuracy of artificial neural networks (ANNs) by using genetic algorithms (GA). The sample in this study included 228 patients with first low-trauma hip fracture and 215 patients without hip fracture, both of them were interviewed with 78 questions. We used logistic regression to select 5 important factors (i.e., bone mineral density, experience of fracture, average hand grip strength, intake of coffee, and peak expirat...

  8. Rendezvous maneuvers using Genetic Algorithm

    International Nuclear Information System (INIS)

    Dos Santos, Denílson Paulo Souza; De Almeida Prado, Antônio F Bertachini; Teodoro, Anderson Rodrigo Barretto

    2013-01-01

    The present paper has the goal of studying orbital maneuvers of Rendezvous, that is an orbital transfer where a spacecraft has to change its orbit to meet with another spacecraft that is travelling in another orbit. This transfer will be accomplished by using a multi-impulsive control. A genetic algorithm is used to find the transfers that have minimum fuel consumption

  9. Assessment of genetic and nongenetic interactions for the prediction of depressive symptomatology: an analysis of the Wisconsin Longitudinal Study using machine learning algorithms.

    Science.gov (United States)

    Roetker, Nicholas S; Page, C David; Yonker, James A; Chang, Vicky; Roan, Carol L; Herd, Pamela; Hauser, Taissa S; Hauser, Robert M; Atwood, Craig S

    2013-10-01

    We examined depression within a multidimensional framework consisting of genetic, environmental, and sociobehavioral factors and, using machine learning algorithms, explored interactions among these factors that might better explain the etiology of depressive symptoms. We measured current depressive symptoms using the Center for Epidemiologic Studies Depression Scale (n = 6378 participants in the Wisconsin Longitudinal Study). Genetic factors were 78 single nucleotide polymorphisms (SNPs); environmental factors-13 stressful life events (SLEs), plus a composite proportion of SLEs index; and sociobehavioral factors-18 personality, intelligence, and other health or behavioral measures. We performed traditional SNP associations via logistic regression likelihood ratio testing and explored interactions with support vector machines and Bayesian networks. After correction for multiple testing, we found no significant single genotypic associations with depressive symptoms. Machine learning algorithms showed no evidence of interactions. Naïve Bayes produced the best models in both subsets and included only environmental and sociobehavioral factors. We found no single or interactive associations with genetic factors and depressive symptoms. Various environmental and sociobehavioral factors were more predictive of depressive symptoms, yet their impacts were independent of one another. A genome-wide analysis of genetic alterations using machine learning methodologies will provide a framework for identifying genetic-environmental-sociobehavioral interactions in depressive symptoms.

  10. Application of the nonlinear time series prediction method of genetic algorithm for forecasting surface wind of point station in the South China Sea with scatterometer observations

    International Nuclear Information System (INIS)

    Zhong Jian; Dong Gang; Sun Yimei; Zhang Zhaoyang; Wu Yuqin

    2016-01-01

    The present work reports the development of nonlinear time series prediction method of genetic algorithm (GA) with singular spectrum analysis (SSA) for forecasting the surface wind of a point station in the South China Sea (SCS) with scatterometer observations. Before the nonlinear technique GA is used for forecasting the time series of surface wind, the SSA is applied to reduce the noise. The surface wind speed and surface wind components from scatterometer observations at three locations in the SCS have been used to develop and test the technique. The predictions have been compared with persistence forecasts in terms of root mean square error. The predicted surface wind with GA and SSA made up to four days (longer for some point station) in advance have been found to be significantly superior to those made by persistence model. This method can serve as a cost-effective alternate prediction technique for forecasting surface wind of a point station in the SCS basin. (paper)

  11. Amodified probabilistic genetic algorithm for the solution of complex constrained optimization problems

    OpenAIRE

    Vorozheikin, A.; Gonchar, T.; Panfilov, I.; Sopov, E.; Sopov, S.

    2009-01-01

    A new algorithm for the solution of complex constrained optimization problems based on the probabilistic genetic algorithm with optimal solution prediction is proposed. The efficiency investigation results in comparison with standard genetic algorithm are presented.

  12. Problem solving with genetic algorithms and Splicer

    Science.gov (United States)

    Bayer, Steven E.; Wang, Lui

    1991-01-01

    Genetic algorithms are highly parallel, adaptive search procedures (i.e., problem-solving methods) loosely based on the processes of population genetics and Darwinian survival of the fittest. Genetic algorithms have proven useful in domains where other optimization techniques perform poorly. The main purpose of the paper is to discuss a NASA-sponsored software development project to develop a general-purpose tool for using genetic algorithms. The tool, called Splicer, can be used to solve a wide variety of optimization problems and is currently available from NASA and COSMIC. This discussion is preceded by an introduction to basic genetic algorithm concepts and a discussion of genetic algorithm applications.

  13. A hybrid Genetic Algorithm and Monte Carlo simulation approach to predict hourly energy consumption and generation by a cluster of Net Zero Energy Buildings

    International Nuclear Information System (INIS)

    Garshasbi, Samira; Kurnitski, Jarek; Mohammadi, Yousef

    2016-01-01

    Graphical abstract: The energy consumption and renewable generation in a cluster of NZEBs are modeled by a novel hybrid Genetic Algorithm and Monte Carlo simulation approach and used for the prediction of instantaneous and cumulative net energy balances and hourly amount of energy taken from and supplied to the central energy grid. - Highlights: • Hourly energy consumption and generation by a cluster of NZEBs was simulated. • Genetic Algorithm and Monte Carlo simulation approach were employed. • Dampening effect of energy used by a cluster of buildings was demonstrated. • Hourly amount of energy taken from and supplied to the grid was simulated. • Results showed that NZEB cluster was 63.5% grid dependant on annual bases. - Abstract: Employing a hybrid Genetic Algorithm (GA) and Monte Carlo (MC) simulation approach, energy consumption and renewable energy generation in a cluster of Net Zero Energy Buildings (NZEBs) was thoroughly investigated with hourly simulation. Moreover, the cumulative energy consumption and generation of the whole cluster and each individual building within the simulation space were accurately monitored and reported. The results indicate that the developed simulation algorithm is able to predict the total instantaneous and cumulative amount of energy taken from and supplied to the central energy grid over any time period. During the course of simulation, about 60–100% of total daily generated renewable energy was consumed by NZEBs and up to 40% of that was fed back into the central energy grid as surplus energy. The minimum grid dependency of the cluster was observed in June and July where 11.2% and 9.9% of the required electricity was supplied from the central energy grid, respectively. On the other hand, the NZEB cluster was strongly grid dependant in January and December by importing 70.7% and 76.1% of its required energy demand via the central energy grid, in the order given. Simulation results revealed that the cluster was 63

  14. Pressure prediction model based on artificial neural network optimized by genetic algorithm and its application in quasi-static calibration of piezoelectric high-pressure sensor.

    Science.gov (United States)

    Gu, Tingwei; Kong, Deren; Jiang, Jian; Shang, Fei; Chen, Jing

    2016-12-01

    This paper applies back propagation neural network (BPNN) optimized by genetic algorithm (GA) for the prediction of pressure generated by a drop-weight device and the quasi-static calibration of piezoelectric high-pressure sensors for the measurement of propellant powder gas pressure. The method can effectively overcome the slow convergence and local minimum problems of BPNN. Based on test data of quasi-static comparison calibration method, a mathematical model between each parameter of drop-weight device and peak pressure and pulse width was established, through which the practical quasi-static calibration without continuously using expensive reference sensors could be realized. Compared with multiple linear regression method, the GA-BPNN model has higher prediction accuracy and stability. The percentages of prediction error of peak pressure and pulse width are less than 0.7% and 0.3%, respectively.

  15. Genetic Algorithms for Case Adaptation

    Energy Technology Data Exchange (ETDEWEB)

    Salem, A M [Computer Science Dept, Faculty of Computer and Information Sciences, Ain Shams University, Cairo (Egypt); Mohamed, A H [Solid State Dept., (NCRRT), Cairo (Egypt)

    2008-07-01

    Case based reasoning (CBR) paradigm has been widely used to provide computer support for recalling and adapting known cases to novel situations. Case adaptation algorithms generally rely on knowledge based and heuristics in order to change the past solutions to solve new problems. However, case adaptation has always been a difficult process to engineers within (CBR) cycle. Its difficulties can be referred to its domain dependency; and computational cost. In an effort to solve this problem, this research explores a general-purpose method that applying a genetic algorithm (GA) to CBR adaptation. Therefore, it can decrease the computational complexity of the search space in the problems having a great dependency on their domain knowledge. The proposed model can be used to perform a variety of design tasks on a broad set of application domains. However, it has been implemented for the tablet formulation as a domain of application. The proposed system has improved the performance of the CBR design systems.

  16. Genetic Algorithms for Case Adaptation

    International Nuclear Information System (INIS)

    Salem, A.M.; Mohamed, A.H.

    2008-01-01

    Case based reasoning (CBR) paradigm has been widely used to provide computer support for recalling and adapting known cases to novel situations. Case adaptation algorithms generally rely on knowledge based and heuristics in order to change the past solutions to solve new problems. However, case adaptation has always been a difficult process to engineers within (CBR) cycle. Its difficulties can be referred to its domain dependency; and computational cost. In an effort to solve this problem, this research explores a general-purpose method that applying a genetic algorithm (GA) to CBR adaptation. Therefore, it can decrease the computational complexity of the search space in the problems having a great dependency on their domain knowledge. The proposed model can be used to perform a variety of design tasks on a broad set of application domains. However, it has been implemented for the tablet formulation as a domain of application. The proposed system has improved the performance of the CBR design systems

  17. Learning Intelligent Genetic Algorithms Using Japanese Nonograms

    Science.gov (United States)

    Tsai, Jinn-Tsong; Chou, Ping-Yi; Fang, Jia-Cen

    2012-01-01

    An intelligent genetic algorithm (IGA) is proposed to solve Japanese nonograms and is used as a method in a university course to learn evolutionary algorithms. The IGA combines the global exploration capabilities of a canonical genetic algorithm (CGA) with effective condensed encoding, improved fitness function, and modified crossover and…

  18. Prediction of crack growth direction by Strain Energy Sih's Theory on specimens SEN under tension-compression biaxial loading employing Genetic Algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Rodriguez-MartInez R; Lugo-Gonzalez E; Urriolagoitia-Calderon G; Urriolagoitia-Sosa G; Hernandez-Gomez L H; Romero-Angeles B; Torres-San Miguel Ch, E-mail: rrodriguezm@ipn.mx, E-mail: urrio332@hotmail.com, E-mail: guiurri@hotmail.com, E-mail: luishector56@hotmail.com, E-mail: romerobeatriz98@hotmail.com, E-mail: napor@hotmail.com [INSTITUTO POLITECNICO NACIONAL Seccion de Estudios de Posgrado e Investigacion (SEPI), Escuela Superior de Ingenieria Mecanica y Electrica (ESIME), Edificio 5. 2do Piso, Unidad Profesional Adolfo Lopez Mateos ' Zacatenco' Col. Lindavista, C.P. 07738, Mexico, D.F. (Mexico)

    2011-07-19

    Crack growth direction has been studied in many ways. Particularly Sih's strain energy theory predicts that a fracture under a three-dimensional state of stress spreads in direction of the minimum strain energy density. In this work a study for angle of fracture growth was made, considering a biaxial stress state at the crack tip on SEN specimens. The stress state applied on a tension-compression SEN specimen is biaxial one on crack tip, as it can observed in figure 1. A solution method proposed to obtain a mathematical model considering genetic algorithms, which have demonstrated great capacity for the solution of many engineering problems. From the model given by Sih one can deduce the density of strain energy stored for unit of volume at the crack tip as dW = [1/2E({sigma}{sup 2}{sub x} + {sigma}{sup 2}{sub y}) - {nu}/E({sigma}{sub x}{sigma}{sub y})]dV (1). From equation (1) a mathematical deduction to solve in terms of {theta} of this case was developed employing Genetic Algorithms, where {theta} is a crack propagation direction in plane x-y. Steel and aluminium mechanical properties to modelled specimens were employed, because they are two of materials but used in engineering design. Obtained results show stable zones of fracture propagation but only in a range of applied loading.

  19. Prediction of crack growth direction by Strain Energy Sih's Theory on specimens SEN under tension-compression biaxial loading employing Genetic Algorithms

    International Nuclear Information System (INIS)

    Rodriguez-MartInez R; Lugo-Gonzalez E; Urriolagoitia-Calderon G; Urriolagoitia-Sosa G; Hernandez-Gomez L H; Romero-Angeles B; Torres-San Miguel Ch

    2011-01-01

    Crack growth direction has been studied in many ways. Particularly Sih's strain energy theory predicts that a fracture under a three-dimensional state of stress spreads in direction of the minimum strain energy density. In this work a study for angle of fracture growth was made, considering a biaxial stress state at the crack tip on SEN specimens. The stress state applied on a tension-compression SEN specimen is biaxial one on crack tip, as it can observed in figure 1. A solution method proposed to obtain a mathematical model considering genetic algorithms, which have demonstrated great capacity for the solution of many engineering problems. From the model given by Sih one can deduce the density of strain energy stored for unit of volume at the crack tip as dW = [1/2E(σ 2 x + σ 2 y ) - ν/E(σ x σy)]dV (1). From equation (1) a mathematical deduction to solve in terms of θ of this case was developed employing Genetic Algorithms, where θ is a crack propagation direction in plane x-y. Steel and aluminium mechanical properties to modelled specimens were employed, because they are two of materials but used in engineering design. Obtained results show stable zones of fracture propagation but only in a range of applied loading.

  20. Genetic Algorithm Based Microscale Vehicle Emissions Modelling

    Directory of Open Access Journals (Sweden)

    Sicong Zhu

    2015-01-01

    Full Text Available There is a need to match emission estimations accuracy with the outputs of transport models. The overall error rate in long-term traffic forecasts resulting from strategic transport models is likely to be significant. Microsimulation models, whilst high-resolution in nature, may have similar measurement errors if they use the outputs of strategic models to obtain traffic demand predictions. At the microlevel, this paper discusses the limitations of existing emissions estimation approaches. Emission models for predicting emission pollutants other than CO2 are proposed. A genetic algorithm approach is adopted to select the predicting variables for the black box model. The approach is capable of solving combinatorial optimization problems. Overall, the emission prediction results reveal that the proposed new models outperform conventional equations in terms of accuracy and robustness.

  1. Genetic algorithms and fuzzy multiobjective optimization

    CERN Document Server

    Sakawa, Masatoshi

    2002-01-01

    Since the introduction of genetic algorithms in the 1970s, an enormous number of articles together with several significant monographs and books have been published on this methodology. As a result, genetic algorithms have made a major contribution to optimization, adaptation, and learning in a wide variety of unexpected fields. Over the years, many excellent books in genetic algorithm optimization have been published; however, they focus mainly on single-objective discrete or other hard optimization problems under certainty. There appears to be no book that is designed to present genetic algorithms for solving not only single-objective but also fuzzy and multiobjective optimization problems in a unified way. Genetic Algorithms And Fuzzy Multiobjective Optimization introduces the latest advances in the field of genetic algorithm optimization for 0-1 programming, integer programming, nonconvex programming, and job-shop scheduling problems under multiobjectiveness and fuzziness. In addition, the book treats a w...

  2. Ecological niche modeling for visceral leishmaniasis in the state of Bahia, Brazil, using genetic algorithm for rule-set prediction and growing degree day-water budget analysis

    Directory of Open Access Journals (Sweden)

    Prixia Nieto

    2006-11-01

    Full Text Available Two predictive models were developed within a geographic information system using Genetic Algorithm Rule-Set Prediction (GARP and the growing degree day (GDD-water budget (WB concept to predict the distribution and potential risk of visceral leishmaniasis (VL in the State of Bahia, Brazil. The objective was to define the environmental suitability of the disease as well as to obtain a deeper understanding of the eco-epidemiology of VL by associating environmental and climatic variables with disease prevalence. Both the GARP model and the GDDWB model, using different analysis approaches and with the same human prevalence database, predicted similar distribution and abundance patterns for the Lutzomyia longipalpis-Leishmania chagasi system in Bahia. High and moderate prevalence sites for VL were significantly related to areas of high and moderate risk prediction by: (i the area predicted by the GARP model, depending on the number of pixels that overlapped among eleven annual model years, and (ii the number of potential generations per year that could be completed by the Lu. longipalpis-L. chagasi system by GDD-WB analysis. When applied to the ecological zones of Bahia, both the GARP and the GDD-WB prediction models suggest that the highest VL risk is in the interior region of the state, characterized by a semi-arid and hot climate known as Caatinga, while the risk in the Bahia interior forest and the Cerrado ecological regions is lower. The Bahia coastal forest was predicted to be a low-risk area due to the unsuitable conditions for the vector and VL transmission.

  3. Prediction of Endocrine System Affectation in Fisher 344 Rats by Food Intake Exposed with Malathion, Applying Naïve Bayes Classifier and Genetic Algorithms.

    Science.gov (United States)

    Mora, Juan David Sandino; Hurtado, Darío Amaya; Sandoval, Olga Lucía Ramos

    2016-01-01

    Reported cases of uncontrolled use of pesticides and its produced effects by direct or indirect exposition, represent a high risk for human health. Therefore, in this paper, it is shown the results of the development and execution of an algorithm that predicts the possible effects in endocrine system in Fisher 344 (F344) rats, occasioned by ingestion of malathion. It was referred to ToxRefDB database in which different case studies in F344 rats exposed to malathion were collected. The experimental data were processed using Naïve Bayes (NB) machine learning classifier, which was subsequently optimized using genetic algorithms (GAs). The model was executed in an application with a graphical user interface programmed in C#. There was a tendency to suffer bigger alterations, increasing levels in the parathyroid gland in dosages between 4 and 5 mg/kg/day, in contrast to the thyroid gland for doses between 739 and 868 mg/kg/day. It was showed a greater resistance for females to contract effects on the endocrine system by the ingestion of malathion. Females were more susceptible to suffer alterations in the pituitary gland with exposure times between 3 and 6 months. The prediction model based on NB classifiers allowed to analyze all the possible combinations of the studied variables and improving its accuracy using GAs. Excepting the pituitary gland, females demonstrated better resistance to contract effects by increasing levels on the rest of endocrine system glands.

  4. ADME evaluation in drug discovery. 1. Applications of genetic algorithms to the prediction of blood-brain partitioning of a large set of drugs.

    Science.gov (United States)

    Hou, Tingjun; Xu, Xiaojie

    2002-12-01

    In this study, the relationships between the brain-blood concentration ratio of 96 structurally diverse compounds with a large number of structurally derived descriptors were investigated. The linear models were based on molecular descriptors that can be calculated for any compound simply from a knowledge of its molecular structure. The linear correlation coefficients of the models were optimized by genetic algorithms (GAs), and the descriptors used in the linear models were automatically selected from 27 structurally derived descriptors. The GA optimizations resulted in a group of linear models with three or four molecular descriptors with good statistical significance. The change of descriptor use as the evolution proceeds demonstrates that the octane/water partition coefficient and the partial negative solvent-accessible surface area multiplied by the negative charge are crucial to brain-blood barrier permeability. Moreover, we found that the predictions using multiple QSPR models from GA optimization gave quite good results in spite of the diversity of structures, which was better than the predictions using the best single model. The predictions for the two external sets with 37 diverse compounds using multiple QSPR models indicate that the best linear models with four descriptors are sufficiently effective for predictive use. Considering the ease of computation of the descriptors, the linear models may be used as general utilities to screen the blood-brain barrier partitioning of drugs in a high-throughput fashion.

  5. Enhancing the Predicting Accuracy of the Water Stage Using a Physical-Based Model and an Artificial Neural Network-Genetic Algorithm in a River System

    Directory of Open Access Journals (Sweden)

    Wen-Cheng Liu

    2014-06-01

    Full Text Available Accurate simulations of river stages during typhoon events are critically important for flood control and are necessary for disaster prevention and water resources management in Taiwan. This study applies two artificial neural network (ANN models, including the back propagation neural network (BPNN and genetic algorithm neural network (GANN techniques, to improve predictions from a one-dimensional flood routing hydrodynamic model regarding the water stages during typhoon events in the Danshuei River system in northern Taiwan. The hydrodynamic model is driven by freshwater discharges at the upstream boundary conditions and by the water levels at the downstream boundary condition. The model provides a sound physical basis for simulating water stages along the river. The simulated results of the hydrodynamic model show that the model cannot reproduce the water stages at different stations during typhoon events for the model calibration and verification phases. The BPNN and GANN models can improve the simulated water stages compared with the performance of the hydrodynamic model. The GANN model satisfactorily predicts water stages during the training and verification phases and exhibits the lowest values of mean absolute error, root-mean-square error and peak error compared with the simulated results at different stations using the hydrodynamic model and the BPNN model. Comparison of the simulated results shows that the GANN model can be successfully applied to predict the water stages of the Danshuei River system during typhoon events.

  6. Algorithms for Protein Structure Prediction

    DEFF Research Database (Denmark)

    Paluszewski, Martin

    -trace. Here we present three different approaches for reconstruction of C-traces from predictable measures. In our first approach [63, 62], the C-trace is positioned on a lattice and a tabu-search algorithm is applied to find minimum energy structures. The energy function is based on half-sphere-exposure (HSE......) is more robust than standard Monte Carlo search. In the second approach for reconstruction of C-traces, an exact branch and bound algorithm has been developed [67, 65]. The model is discrete and makes use of secondary structure predictions, HSE, CN and radius of gyration. We show how to compute good lower...... bounds for partial structures very fast. Using these lower bounds, we are able to find global minimum structures in a huge conformational space in reasonable time. We show that many of these global minimum structures are of good quality compared to the native structure. Our branch and bound algorithm...

  7. In silico prediction of toxicity of phenols to Tetrahymena pyriformis by using genetic algorithm and decision tree-based modeling approach.

    Science.gov (United States)

    Abbasitabar, Fatemeh; Zare-Shahabadi, Vahid

    2017-04-01

    Risk assessment of chemicals is an important issue in environmental protection; however, there is a huge lack of experimental data for a large number of end-points. The experimental determination of toxicity of chemicals involves high costs and time-consuming process. In silico tools such as quantitative structure-toxicity relationship (QSTR) models, which are constructed on the basis of computational molecular descriptors, can predict missing data for toxic end-points for existing or even not yet synthesized chemicals. Phenol derivatives are known to be aquatic pollutants. With this background, we aimed to develop an accurate and reliable QSTR model for the prediction of toxicity of 206 phenols to Tetrahymena pyriformis. A multiple linear regression (MLR)-based QSTR was obtained using a powerful descriptor selection tool named Memorized_ACO algorithm. Statistical parameters of the model were 0.72 and 0.68 for R training 2 and R test 2 , respectively. To develop a high-quality QSTR model, classification and regression tree (CART) was employed. Two approaches were considered: (1) phenols were classified into different modes of action using CART and (2) the phenols in the training set were partitioned to several subsets by a tree in such a manner that in each subset, a high-quality MLR could be developed. For the first approach, the statistical parameters of the resultant QSTR model were improved to 0.83 and 0.75 for R training 2 and R test 2 , respectively. Genetic algorithm was employed in the second approach to obtain an optimal tree, and it was shown that the final QSTR model provided excellent prediction accuracy for the training and test sets (R training 2 and R test 2 were 0.91 and 0.93, respectively). The mean absolute error for the test set was computed as 0.1615. Copyright © 2016 Elsevier Ltd. All rights reserved.

  8. Boolean Queries Optimization by Genetic Algorithms

    Czech Academy of Sciences Publication Activity Database

    Húsek, Dušan; Owais, S.S.J.; Krömer, P.; Snášel, Václav

    2005-01-01

    Roč. 15, - (2005), s. 395-409 ISSN 1210-0552 R&D Projects: GA AV ČR 1ET100300414 Institutional research plan: CEZ:AV0Z10300504 Keywords : evolutionary algorithms * genetic algorithms * genetic programming * information retrieval * Boolean query Subject RIV: BB - Applied Statistics, Operational Research

  9. Effect of Co-segregating Markers on High-Density Genetic Maps and Prediction of Map Expansion Using Machine Learning Algorithms.

    Science.gov (United States)

    N'Diaye, Amidou; Haile, Jemanesh K; Fowler, D Brian; Ammar, Karim; Pozniak, Curtis J

    2017-01-01

    Advances in sequencing and genotyping methods have enable cost-effective production of high throughput single nucleotide polymorphism (SNP) markers, making them the choice for linkage mapping. As a result, many laboratories have developed high-throughput SNP assays and built high-density genetic maps. However, the number of markers may, by orders of magnitude, exceed the resolution of recombination for a given population size so that only a minority of markers can accurately be ordered. Another issue attached to the so-called 'large p, small n' problem is that high-density genetic maps inevitably result in many markers clustering at the same position (co-segregating markers). While there are a number of related papers, none have addressed the impact of co-segregating markers on genetic maps. In the present study, we investigated the effects of co-segregating markers on high-density genetic map length and marker order using empirical data from two populations of wheat, Mohawk × Cocorit (durum wheat) and Norstar × Cappelle Desprez (bread wheat). The maps of both populations consisted of 85% co-segregating markers. Our study clearly showed that excess of co-segregating markers can lead to map expansion, but has little effect on markers order. To estimate the inflation factor (IF), we generated a total of 24,473 linkage maps (8,203 maps for Mohawk × Cocorit and 16,270 maps for Norstar × Cappelle Desprez). Using seven machine learning algorithms, we were able to predict with an accuracy of 0.7 the map expansion due to the proportion of co-segregating markers. For example in Mohawk × Cocorit, with 10 and 80% co-segregating markers the length of the map inflated by 4.5 and 16.6%, respectively. Similarly, the map of Norstar × Cappelle Desprez expanded by 3.8 and 11.7% with 10 and 80% co-segregating markers. With the increasing number of markers on SNP-chips, the proportion of co-segregating markers in high-density maps will continue to increase making map expansion

  10. Effect of Co-segregating Markers on High-Density Genetic Maps and Prediction of Map Expansion Using Machine Learning Algorithms

    Directory of Open Access Journals (Sweden)

    Amidou N’Diaye

    2017-08-01

    Full Text Available Advances in sequencing and genotyping methods have enable cost-effective production of high throughput single nucleotide polymorphism (SNP markers, making them the choice for linkage mapping. As a result, many laboratories have developed high-throughput SNP assays and built high-density genetic maps. However, the number of markers may, by orders of magnitude, exceed the resolution of recombination for a given population size so that only a minority of markers can accurately be ordered. Another issue attached to the so-called ‘large p, small n’ problem is that high-density genetic maps inevitably result in many markers clustering at the same position (co-segregating markers. While there are a number of related papers, none have addressed the impact of co-segregating markers on genetic maps. In the present study, we investigated the effects of co-segregating markers on high-density genetic map length and marker order using empirical data from two populations of wheat, Mohawk × Cocorit (durum wheat and Norstar × Cappelle Desprez (bread wheat. The maps of both populations consisted of 85% co-segregating markers. Our study clearly showed that excess of co-segregating markers can lead to map expansion, but has little effect on markers order. To estimate the inflation factor (IF, we generated a total of 24,473 linkage maps (8,203 maps for Mohawk × Cocorit and 16,270 maps for Norstar × Cappelle Desprez. Using seven machine learning algorithms, we were able to predict with an accuracy of 0.7 the map expansion due to the proportion of co-segregating markers. For example in Mohawk × Cocorit, with 10 and 80% co-segregating markers the length of the map inflated by 4.5 and 16.6%, respectively. Similarly, the map of Norstar × Cappelle Desprez expanded by 3.8 and 11.7% with 10 and 80% co-segregating markers. With the increasing number of markers on SNP-chips, the proportion of co-segregating markers in high-density maps will continue to increase

  11. Genetic Algorithms for Case Adaptation

    International Nuclear Information System (INIS)

    Salem, A.M.; Mohamed, A.H.

    2008-01-01

    Case adaptation is the core of case based reasoning (CBR) approach that can modify the past solutions to solve new problems. It generally relies on the knowledge base and heuristics in order to achieve the required changes. It has always been a difficult process to designers within (CBR) cycle. Its difficulties can be referred to the large effort, and computational analysis needed for acquiring the knowledge's domain. To solve these problems, this research explores a new method that applying a genetic algorithm (GA) to CBR adaptation. However, it can decrease the computational complexity of determining the required changes of the problems especially those having a great amount of domain knowledge. besides, it can decrease the required time by dividing the design task into sub tasks those can be solved at the same time. Therefore, the proposed system can he practically applied for solving the complex problems. It can be used to perform a variety of design tasks on a broad set of application domains. However, it has been implemented for the tablet formulation as a domain of application. Proposed system has improved the accuracy performance of the CBR design systems

  12. Portfolio selection using genetic algorithms | Yahaya | International ...

    African Journals Online (AJOL)

    In this paper, one of the nature-inspired evolutionary algorithms – a Genetic Algorithms (GA) was used in solving the portfolio selection problem (PSP). Based on a real dataset from a popular stock market, the performance of the algorithm in relation to those obtained from one of the popular quadratic programming (QP) ...

  13. Dynamic traffic assignment : genetic algorithms approach

    Science.gov (United States)

    1997-01-01

    Real-time route guidance is a promising approach to alleviating congestion on the nations highways. A dynamic traffic assignment model is central to the development of guidance strategies. The artificial intelligence technique of genetic algorithm...

  14. Genetic algorithms at UC Davis/LLNL

    Energy Technology Data Exchange (ETDEWEB)

    Vemuri, V.R. [comp.

    1993-12-31

    A tutorial introduction to genetic algorithms is given. This brief tutorial should serve the purpose of introducing the subject to the novice. The tutorial is followed by a brief commentary on the term project reports that follow.

  15. Genetic algorithm for nuclear data evaluation

    Energy Technology Data Exchange (ETDEWEB)

    Arthur, Jennifer Ann [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2018-02-02

    These are slides on genetic algorithm for nuclear data evaluation. The following is covered: initial population, fitness (outer loop), calculate fitness, selection (first part of inner loop), reproduction (second part of inner loop), solution, and examples.

  16. Genetic algorithms and supernovae type Ia analysis

    International Nuclear Information System (INIS)

    Bogdanos, Charalampos; Nesseris, Savvas

    2009-01-01

    We introduce genetic algorithms as a means to analyze supernovae type Ia data and extract model-independent constraints on the evolution of the Dark Energy equation of state w(z) ≡ P DE /ρ DE . Specifically, we will give a brief introduction to the genetic algorithms along with some simple examples to illustrate their advantages and finally we will apply them to the supernovae type Ia data. We find that genetic algorithms can lead to results in line with already established parametric and non-parametric reconstruction methods and could be used as a complementary way of treating SNIa data. As a non-parametric method, genetic algorithms provide a model-independent way to analyze data and can minimize bias due to premature choice of a dark energy model

  17. Particle swarm genetic algorithm and its application

    International Nuclear Information System (INIS)

    Liu Chengxiang; Yan Changxiang; Wang Jianjun; Liu Zhenhai

    2012-01-01

    To solve the problems of slow convergence speed and tendency to fall into the local optimum of the standard particle swarm optimization while dealing with nonlinear constraint optimization problem, a particle swarm genetic algorithm is designed. The proposed algorithm adopts feasibility principle handles constraint conditions and avoids the difficulty of penalty function method in selecting punishment factor, generates initial feasible group randomly, which accelerates particle swarm convergence speed, and introduces genetic algorithm crossover and mutation strategy to avoid particle swarm falls into the local optimum Through the optimization calculation of the typical test functions, the results show that particle swarm genetic algorithm has better optimized performance. The algorithm is applied in nuclear power plant optimization, and the optimization results are significantly. (authors)

  18. Evolving temporal association rules with genetic algorithms

    OpenAIRE

    Matthews, Stephen G.; Gongora, Mario A.; Hopgood, Adrian A.

    2010-01-01

    A novel framework for mining temporal association rules by discovering itemsets with a genetic algorithm is introduced. Metaheuristics have been applied to association rule mining, we show the efficacy of extending this to another variant - temporal association rule mining. Our framework is an enhancement to existing temporal association rule mining methods as it employs a genetic algorithm to simultaneously search the rule space and temporal space. A methodology for validating the ability of...

  19. Development of a Framework for Genetic Algorithms

    OpenAIRE

    Wååg, Håkan

    2009-01-01

    Genetic algorithms is a method of optimization that can be used tosolve many different kinds of problems. This thesis focuses ondeveloping a framework for genetic algorithms that is capable ofsolving at least the two problems explored in the work. Otherproblems are supported by allowing user-made extensions.The purpose of this thesis is to explore the possibilities of geneticalgorithms for optimization problems and artificial intelligenceapplications.To test the framework two applications are...

  20. Quantum Genetic Algorithms for Computer Scientists

    OpenAIRE

    Lahoz Beltrá, Rafael

    2016-01-01

    Genetic algorithms (GAs) are a class of evolutionary algorithms inspired by Darwinian natural selection. They are popular heuristic optimisation methods based on simulated genetic mechanisms, i.e., mutation, crossover, etc. and population dynamical processes such as reproduction, selection, etc. Over the last decade, the possibility to emulate a quantum computer (a computer using quantum-mechanical phenomena to perform operations on data) has led to a new class of GAs known as “Quantum Geneti...

  1. Genetic algorithms in loading pattern optimization

    International Nuclear Information System (INIS)

    Yilmazbayhan, A.; Tombakoglu, M.; Bekar, K. B.; Erdemli, A. Oe

    2001-01-01

    Genetic Algorithm (GA) based systems are used for the loading pattern optimization. The use of Genetic Algorithm operators such as regional crossover, crossover and mutation, and selection of initial population size for PWRs are discussed. Antithetic variates are used to generate the initial population. The performance of GA with antithetic variates is compared to traditional GA. The results of multi-cycle optimization are discussed for objective function taking into account cycle burn-up and discharge burn-up

  2. Adaptive sensor fusion using genetic algorithms

    International Nuclear Information System (INIS)

    Fitzgerald, D.S.; Adams, D.G.

    1994-01-01

    Past attempts at sensor fusion have used some form of Boolean logic to combine the sensor information. As an alteniative, an adaptive ''fuzzy'' sensor fusion technique is described in this paper. This technique exploits the robust capabilities of fuzzy logic in the decision process as well as the optimization features of the genetic algorithm. This paper presents a brief background on fuzzy logic and genetic algorithms and how they are used in an online implementation of adaptive sensor fusion

  3. Improved hybrid optimization algorithm for 3D protein structure prediction.

    Science.gov (United States)

    Zhou, Changjun; Hou, Caixia; Wei, Xiaopeng; Zhang, Qiang

    2014-07-01

    A new improved hybrid optimization algorithm - PGATS algorithm, which is based on toy off-lattice model, is presented for dealing with three-dimensional protein structure prediction problems. The algorithm combines the particle swarm optimization (PSO), genetic algorithm (GA), and tabu search (TS) algorithms. Otherwise, we also take some different improved strategies. The factor of stochastic disturbance is joined in the particle swarm optimization to improve the search ability; the operations of crossover and mutation that are in the genetic algorithm are changed to a kind of random liner method; at last tabu search algorithm is improved by appending a mutation operator. Through the combination of a variety of strategies and algorithms, the protein structure prediction (PSP) in a 3D off-lattice model is achieved. The PSP problem is an NP-hard problem, but the problem can be attributed to a global optimization problem of multi-extremum and multi-parameters. This is the theoretical principle of the hybrid optimization algorithm that is proposed in this paper. The algorithm combines local search and global search, which overcomes the shortcoming of a single algorithm, giving full play to the advantage of each algorithm. In the current universal standard sequences, Fibonacci sequences and real protein sequences are certified. Experiments show that the proposed new method outperforms single algorithms on the accuracy of calculating the protein sequence energy value, which is proved to be an effective way to predict the structure of proteins.

  4. Statistical Analysis of CO2 Exposed Wells to Predict Long Term Leakage through the Development of an Integrated Neural-Genetic Algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Boyun [Univ. of Louisiana, Lafayette, LA (United States); Duguid, Andrew [Battelle, Columbus, OH (United States); Nygaard, Ronar [Missouri Univ. of Science and Technology, Rolla, MO (United States)

    2017-08-05

    The objective of this project is to develop a computerized statistical model with the Integrated Neural-Genetic Algorithm (INGA) for predicting the probability of long-term leak of wells in CO2 sequestration operations. This object has been accomplished by conducting research in three phases: 1) data mining of CO2-explosed wells, 2) INGA computer model development, and 3) evaluation of the predictive performance of the computer model with data from field tests. Data mining was conducted for 510 wells in two CO2 sequestration projects in the Texas Gulf Coast region. They are the Hasting West field and Oyster Bayou field in the Southern Texas. Missing wellbore integrity data were estimated using an analytical and Finite Element Method (FEM) model. The INGA was first tested for performances of convergence and computing efficiency with the obtained data set of high dimension. It was concluded that the INGA can handle the gathered data set with good accuracy and reasonable computing time after a reduction of dimension with a grouping mechanism. A computerized statistical model with the INGA was then developed based on data pre-processing and grouping. Comprehensive training and testing of the model were carried out to ensure that the model is accurate and efficient enough for predicting the probability of long-term leak of wells in CO2 sequestration operations. The Cranfield in the southern Mississippi was select as the test site. Observation wells CFU31F2 and CFU31F3 were used for pressure-testing, formation-logging, and cement-sampling. Tools run in the wells include Isolation Scanner, Slim Cement Mapping Tool (SCMT), Cased Hole Formation Dynamics Tester (CHDT), and Mechanical Sidewall Coring Tool (MSCT). Analyses of the obtained data indicate no leak of CO2 cross the cap zone while it is evident that the well cement sheath was invaded by the CO2 from the storage zone. This observation is consistent

  5. Results of Evolution Supervised by Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Lorentz JÄNTSCHI

    2010-09-01

    Full Text Available The efficiency of a genetic algorithm is frequently assessed using a series of operators of evolution like crossover operators, mutation operators or other dynamic parameters. The present paper aimed to review the main results of evolution supervised by genetic algorithms used to identify solutions to agricultural and horticultural hard problems and to discuss the results of using a genetic algorithms on structure-activity relationships in terms of behavior of evolution supervised by genetic algorithms. A genetic algorithm had been developed and implemented in order to identify the optimal solution in term of estimation power of a multiple linear regression approach for structure-activity relationships. Three survival and three selection strategies (proportional, deterministic and tournament were investigated in order to identify the best survival-selection strategy able to lead to the model with higher estimation power. The Molecular Descriptors Family for structure characterization of a sample of 206 polychlorinated biphenyls with measured octanol-water partition coefficients was used as case study. Evolution using different selection and survival strategies proved to create populations of genotypes living in the evolution space with different diversity and variability. Under a series of criteria of comparisons these populations proved to be grouped and the groups were showed to be statistically different one to each other. The conclusions about genetic algorithm evolution according to a number of criteria were also highlighted.

  6. Tag SNP selection via a genetic algorithm.

    Science.gov (United States)

    Mahdevar, Ghasem; Zahiri, Javad; Sadeghi, Mehdi; Nowzari-Dalini, Abbas; Ahrabian, Hayedeh

    2010-10-01

    Single Nucleotide Polymorphisms (SNPs) provide valuable information on human evolutionary history and may lead us to identify genetic variants responsible for human complex diseases. Unfortunately, molecular haplotyping methods are costly, laborious, and time consuming; therefore, algorithms for constructing full haplotype patterns from small available data through computational methods, Tag SNP selection problem, are convenient and attractive. This problem is proved to be an NP-hard problem, so heuristic methods may be useful. In this paper we present a heuristic method based on genetic algorithm to find reasonable solution within acceptable time. The algorithm was tested on a variety of simulated and experimental data. In comparison with the exact algorithm, based on brute force approach, results show that our method can obtain optimal solutions in almost all cases and runs much faster than exact algorithm when the number of SNP sites is large. Our software is available upon request to the corresponding author.

  7. Solving the SAT problem using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Arunava Bhattacharjee

    2017-08-01

    Full Text Available In this paper we propose our genetic algorithm for solving the SAT problem. We introduce various crossover and mutation techniques and then make a comparative analysis between them in order to find out which techniques are the best suited for solving a SAT instance. Before the genetic algorithm is applied to an instance it is better to seek for unit and pure literals in the given formula and then try to eradicate them. This can considerably reduce the search space, and to demonstrate this we tested our algorithm on some random SAT instances. However, to analyse the various crossover and mutation techniques and also to evaluate the optimality of our algorithm we performed extensive experiments on benchmark instances of the SAT problem. We also estimated the ideal crossover length that would maximise the chances to solve a given SAT instance.

  8. Genetic algorithm for neural networks optimization

    Science.gov (United States)

    Setyawati, Bina R.; Creese, Robert C.; Sahirman, Sidharta

    2004-11-01

    This paper examines the forecasting performance of multi-layer feed forward neural networks in modeling a particular foreign exchange rates, i.e. Japanese Yen/US Dollar. The effects of two learning methods, Back Propagation and Genetic Algorithm, in which the neural network topology and other parameters fixed, were investigated. The early results indicate that the application of this hybrid system seems to be well suited for the forecasting of foreign exchange rates. The Neural Networks and Genetic Algorithm were programmed using MATLAB«.

  9. The Applications of Genetic Algorithms in Medicine

    Directory of Open Access Journals (Sweden)

    Ali Ghaheri

    2015-11-01

    Full Text Available A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.

  10. The Applications of Genetic Algorithms in Medicine.

    Science.gov (United States)

    Ghaheri, Ali; Shoar, Saeed; Naderan, Mohammad; Hoseini, Sayed Shahabuddin

    2015-11-01

    A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.].

  11. Cognitive radio resource allocation based on coupled chaotic genetic algorithm

    International Nuclear Information System (INIS)

    Zu Yun-Xiao; Zhou Jie; Zeng Chang-Chang

    2010-01-01

    A coupled chaotic genetic algorithm for cognitive radio resource allocation which is based on genetic algorithm and coupled Logistic map is proposed. A fitness function for cognitive radio resource allocation is provided. Simulations are conducted for cognitive radio resource allocation by using the coupled chaotic genetic algorithm, simple genetic algorithm and dynamic allocation algorithm respectively. The simulation results show that, compared with simple genetic and dynamic allocation algorithm, coupled chaotic genetic algorithm reduces the total transmission power and bit error rate in cognitive radio system, and has faster convergence speed

  12. Artificial Neural Network Genetic Algorithm As Powerful Tool to Predict and Optimize In vitro Proliferation Mineral Medium for G × N15 Rootstock

    Science.gov (United States)

    Arab, Mohammad M.; Yadollahi, Abbas; Shojaeiyan, Abdolali; Ahmadi, Hamed

    2016-01-01

    One of the major obstacles to the micropropagation of Prunus rootstocks has, up until now, been the lack of a suitable tissue culture medium. Therefore, reformulation of culture media or modification of the mineral content might be a breakthrough to improve in vitro multiplication of G × N15 (garnem). We found artificial neural network in combination of genetic algorithm (ANN-GA) as a very precise and powerful modeling system for optimizing the culture medium, So that modeling the effects of MS mineral salts (NH4+, NO3-, PO42-, Ca2+, K+, SO42-, Mg2+, and Cl−) on in vitro multiplication parameters (the number of microshoots per explant, average length of microshoots, weight of calluses derived from the base of stem explants, and quality index of plantlets) of G × N15. Showed high R2 correlation values of 87, 91, 87, and 74 between observed and predicted values were found for these four growth parameters, respectively. According to the ANN-GA results, among the input variables, NH4+ and NO3- had the highest values of VSR in data set for the parameters studied. The ANN-GA showed that the best proliferation rate was obtained from medium containing (mM) 27.5 NO3-, 14 NH4+, 5 Ca2+, 25.9 K+, 0.7 Mg2+, 1.1 PO42-, 4.7 SO42-, and 0.96 Cl−. The performance of the medium optimized by ANN-GA, denoted as YAS (Yadollahi, Arab and Shojaeiyan), was compared to that of standard growth media for all Prunus rootstock, including the Murashige and Skoog (MS) medium, (specific media) EM, Quoirin and Lepoivre (QL) medium, and woody plant medium (WPM) Prunus. With respect to shoot length, shoot number per cultured explant and productivity (number of microshoots × length of microshoots), YAS was found to be superior to other media for in vitro multiplication of G × N15 rootstocks. In addition, our results indicated that by using ANN-GA, we were able to determine a suitable culture medium formulation to achieve the best in vitro productivity. PMID:27807436

  13. Artificial Neural Network Genetic Algorithm As Powerful Tool to Predict and Optimize In vitro Proliferation Mineral Medium for G × N15 Rootstock.

    Science.gov (United States)

    Arab, Mohammad M; Yadollahi, Abbas; Shojaeiyan, Abdolali; Ahmadi, Hamed

    2016-01-01

    One of the major obstacles to the micropropagation of Prunus rootstocks has, up until now, been the lack of a suitable tissue culture medium. Therefore, reformulation of culture media or modification of the mineral content might be a breakthrough to improve in vitro multiplication of G × N15 (garnem). We found artificial neural network in combination of genetic algorithm (ANN-GA) as a very precise and powerful modeling system for optimizing the culture medium, So that modeling the effects of MS mineral salts ([Formula: see text], [Formula: see text], [Formula: see text], Ca 2+ , K + , [Formula: see text], Mg 2+ , and Cl - ) on in vitro multiplication parameters (the number of microshoots per explant, average length of microshoots, weight of calluses derived from the base of stem explants, and quality index of plantlets) of G × N15. Showed high R 2 correlation values of 87, 91, 87, and 74 between observed and predicted values were found for these four growth parameters, respectively. According to the ANN-GA results, among the input variables, [Formula: see text] and [Formula: see text] had the highest values of VSR in data set for the parameters studied. The ANN-GA showed that the best proliferation rate was obtained from medium containing (mM) 27.5 [Formula: see text], 14 [Formula: see text], 5 Ca 2+ , 25.9 K + , 0.7 Mg 2+ , 1.1 [Formula: see text], 4.7 [Formula: see text], and 0.96 Cl - . The performance of the medium optimized by ANN-GA, denoted as YAS (Yadollahi, Arab and Shojaeiyan), was compared to that of standard growth media for all Prunus rootstock, including the Murashige and Skoog (MS) medium, (specific media) EM, Quoirin and Lepoivre (QL) medium, and woody plant medium (WPM) Prunus . With respect to shoot length, shoot number per cultured explant and productivity (number of microshoots × length of microshoots), YAS was found to be superior to other media for in vitro multiplication of G × N15 rootstocks. In addition, our results indicated that by

  14. The Algorithm for Algorithms: An Evolutionary Algorithm Based on Automatic Designing of Genetic Operators

    Directory of Open Access Journals (Sweden)

    Dazhi Jiang

    2015-01-01

    Full Text Available At present there is a wide range of evolutionary algorithms available to researchers and practitioners. Despite the great diversity of these algorithms, virtually all of the algorithms share one feature: they have been manually designed. A fundamental question is “are there any algorithms that can design evolutionary algorithms automatically?” A more complete definition of the question is “can computer construct an algorithm which will generate algorithms according to the requirement of a problem?” In this paper, a novel evolutionary algorithm based on automatic designing of genetic operators is presented to address these questions. The resulting algorithm not only explores solutions in the problem space like most traditional evolutionary algorithms do, but also automatically generates genetic operators in the operator space. In order to verify the performance of the proposed algorithm, comprehensive experiments on 23 well-known benchmark optimization problems are conducted. The results show that the proposed algorithm can outperform standard differential evolution algorithm in terms of convergence speed and solution accuracy which shows that the algorithm designed automatically by computers can compete with the algorithms designed by human beings.

  15. Quantum Genetic Algorithms for Computer Scientists

    Directory of Open Access Journals (Sweden)

    Rafael Lahoz-Beltra

    2016-10-01

    Full Text Available Genetic algorithms (GAs are a class of evolutionary algorithms inspired by Darwinian natural selection. They are popular heuristic optimisation methods based on simulated genetic mechanisms, i.e., mutation, crossover, etc. and population dynamical processes such as reproduction, selection, etc. Over the last decade, the possibility to emulate a quantum computer (a computer using quantum-mechanical phenomena to perform operations on data has led to a new class of GAs known as “Quantum Genetic Algorithms” (QGAs. In this review, we present a discussion, future potential, pros and cons of this new class of GAs. The review will be oriented towards computer scientists interested in QGAs “avoiding” the possible difficulties of quantum-mechanical phenomena.

  16. Genetic Algorithms for Multiple-Choice Problems

    Science.gov (United States)

    Aickelin, Uwe

    2010-04-01

    This thesis investigates the use of problem-specific knowledge to enhance a genetic algorithm approach to multiple-choice optimisation problems.It shows that such information can significantly enhance performance, but that the choice of information and the way it is included are important factors for success.Two multiple-choice problems are considered.The first is constructing a feasible nurse roster that considers as many requests as possible.In the second problem, shops are allocated to locations in a mall subject to constraints and maximising the overall income.Genetic algorithms are chosen for their well-known robustness and ability to solve large and complex discrete optimisation problems.However, a survey of the literature reveals room for further research into generic ways to include constraints into a genetic algorithm framework.Hence, the main theme of this work is to balance feasibility and cost of solutions.In particular, co-operative co-evolution with hierarchical sub-populations, problem structure exploiting repair schemes and indirect genetic algorithms with self-adjusting decoder functions are identified as promising approaches.The research starts by applying standard genetic algorithms to the problems and explaining the failure of such approaches due to epistasis.To overcome this, problem-specific information is added in a variety of ways, some of which are designed to increase the number of feasible solutions found whilst others are intended to improve the quality of such solutions.As well as a theoretical discussion as to the underlying reasons for using each operator,extensive computational experiments are carried out on a variety of data.These show that the indirect approach relies less on problem structure and hence is easier to implement and superior in solution quality.

  17. Genetic algorithm solution for partial digest problem.

    Science.gov (United States)

    Ahrabian, Hayedeh; Ganjtabesh, Mohammad; Nowzari-Dalini, Abbas; Razaghi-Moghadam-Kashani, Zahra

    2013-01-01

    One of the fundamental problems in computational biology is the construction of physical maps of chromosomes from the hybridisation experiments between unique probes and clones of chromosome fragments. Before introducing the shotgun sequencing method, Partial Digest Problem (PDP) was an intractable problem used to construct the physical maps of DNA sequence in molecular biology. In this paper, we develop a novel Genetic Algorithm (GA) for solving the PDP. This algorithm is implemented and compared with well-known existing algorithms on different types of random and real instances data, and the obtained results show the efficiency of our algorithm. Also, our GA is adapted to handle the erroneous data and their efficiency is presented for the large instances of this problem.

  18. Genetic engineering versus natural evolution: Genetic algorithms with deterministic operators

    NARCIS (Netherlands)

    Jozwiak, L.; Postula, A.

    2002-01-01

    Genetic algorithms (GA) have several important features that predestine them to solve design problems. Their main disadvantage however is the excessively long run-time that is needed to deliver satisfactory results for large instances of complex design problems. The main aims of this paper are (1)

  19. Genetic Optimization Algorithm for Metabolic Engineering Revisited

    Directory of Open Access Journals (Sweden)

    Tobias B. Alter

    2018-05-01

    Full Text Available To date, several independent methods and algorithms exist for exploiting constraint-based stoichiometric models to find metabolic engineering strategies that optimize microbial production performance. Optimization procedures based on metaheuristics facilitate a straightforward adaption and expansion of engineering objectives, as well as fitness functions, while being particularly suited for solving problems of high complexity. With the increasing interest in multi-scale models and a need for solving advanced engineering problems, we strive to advance genetic algorithms, which stand out due to their intuitive optimization principles and the proven usefulness in this field of research. A drawback of genetic algorithms is that premature convergence to sub-optimal solutions easily occurs if the optimization parameters are not adapted to the specific problem. Here, we conducted comprehensive parameter sensitivity analyses to study their impact on finding optimal strain designs. We further demonstrate the capability of genetic algorithms to simultaneously handle (i multiple, non-linear engineering objectives; (ii the identification of gene target-sets according to logical gene-protein-reaction associations; (iii minimization of the number of network perturbations; and (iv the insertion of non-native reactions, while employing genome-scale metabolic models. This framework adds a level of sophistication in terms of strain design robustness, which is exemplarily tested on succinate overproduction in Escherichia coli.

  20. Genetic Algorithms in Wind Turbine Airfoil Design

    Energy Technology Data Exchange (ETDEWEB)

    Grasso, F. [ECN Wind Energy, Petten (Netherlands); Bizzarrini, N.; Coiro, D.P. [Department of Aerospace Engineering, University of Napoli ' Federico II' , Napoli (Italy)

    2011-03-15

    One key element in the aerodynamic design of wind turbines is the use of specially tailored airfoils to increase the ratio of energy capture to the loading and thereby to reduce cost of energy. This work is focused on the design of a wind turbine airfoil by using numerical optimization. Firstly, the optimization approach is presented; a genetic algorithm is used, coupled with RFOIL solver and a composite Bezier geometrical parameterization. A particularly sensitive point is the choice and implementation of constraints; in order to formalize in the most complete and effective way the design requirements, the effects of activating specific constraints are discussed. A numerical example regarding the design of a high efficiency airfoil for the outer part of a blade by using genetic algorithms is illustrated and the results are compared with existing wind turbine airfoils. Finally a new hybrid design strategy is illustrated and discussed, in which the genetic algorithms are used at the beginning of the design process to explore a wide domain. Then, the gradient based algorithms are used in order to improve the first stage optimum.

  1. Application of Genetic Algorithms in Seismic Tomography

    Science.gov (United States)

    Soupios, Pantelis; Akca, Irfan; Mpogiatzis, Petros; Basokur, Ahmet; Papazachos, Constantinos

    2010-05-01

    In the earth sciences several inverse problems that require data fitting and parameter estimation are nonlinear and can involve a large number of unknown parameters. Consequently, the application of analytical inversion or optimization techniques may be quite restrictive. In practice, most analytical methods are local in nature and rely on a linearized form of the problem in question, adopting an iterative procedure using partial derivatives to improve an initial model. This approach can lead to a dependence of the final model solution on the starting model and is prone to entrapment in local misfit minima. Moreover, the calculation of derivatives can be computationally inefficient and create instabilities when numerical approximations are used. In contrast to these local minimization methods, global techniques that do not rely on partial derivatives, are independent of the form of the data misfit criterion, and are computationally robust. Such methods often use random processes to sample a selected wider span of the model space. In this situation, randomly generated models are assessed in terms of their data-fitting quality and the process may be stopped after a certain number of acceptable models is identified or continued until a satisfactory data fit is achieved. A new class of methods known as genetic algorithms achieves the aforementioned approximation through novel model representation and manipulations. Genetic algorithms (GAs) were originally developed in the field of artificial intelligence by John Holland more than 20 years ago, but even in this field it is less than a decade that the methodology has been more generally applied and only recently did the methodology attract the attention of the earth sciences community. Applications have been generally concentrated in geophysics and in particular seismology. As awareness of genetic algorithms grows there surely will be many more and varied applications to earth science problems. In the present work, the

  2. Fashion sketch design by interactive genetic algorithms

    Science.gov (United States)

    Mok, P. Y.; Wang, X. X.; Xu, J.; Kwok, Y. L.

    2012-11-01

    Computer aided design is vitally important for the modern industry, particularly for the creative industry. Fashion industry faced intensive challenges to shorten the product development process. In this paper, a methodology is proposed for sketch design based on interactive genetic algorithms. The sketch design system consists of a sketch design model, a database and a multi-stage sketch design engine. First, a sketch design model is developed based on the knowledge of fashion design to describe fashion product characteristics by using parameters. Second, a database is built based on the proposed sketch design model to define general style elements. Third, a multi-stage sketch design engine is used to construct the design. Moreover, an interactive genetic algorithm (IGA) is used to accelerate the sketch design process. The experimental results have demonstrated that the proposed method is effective in helping laypersons achieve satisfied fashion design sketches.

  3. Medical image segmentation using genetic algorithms.

    Science.gov (United States)

    Maulik, Ujjwal

    2009-03-01

    Genetic algorithms (GAs) have been found to be effective in the domain of medical image segmentation, since the problem can often be mapped to one of search in a complex and multimodal landscape. The challenges in medical image segmentation arise due to poor image contrast and artifacts that result in missing or diffuse organ/tissue boundaries. The resulting search space is therefore often noisy with a multitude of local optima. Not only does the genetic algorithmic framework prove to be effective in coming out of local optima, it also brings considerable flexibility into the segmentation procedure. In this paper, an attempt has been made to review the major applications of GAs to the domain of medical image segmentation.

  4. Genetic prediction of male pattern baldness.

    Directory of Open Access Journals (Sweden)

    Saskia P Hagenaars

    2017-02-01

    Full Text Available Male pattern baldness can have substantial psychosocial effects, and it has been phenotypically linked to adverse health outcomes such as prostate cancer and cardiovascular disease. We explored the genetic architecture of the trait using data from over 52,000 male participants of UK Biobank, aged 40-69 years. We identified over 250 independent genetic loci associated with severe hair loss (P<5x10-8. By splitting the cohort into a discovery sample of 40,000 and target sample of 12,000, we developed a prediction algorithm based entirely on common genetic variants that discriminated (AUC = 0.78, sensitivity = 0.74, specificity = 0.69, PPV = 59%, NPV = 82% those with no hair loss from those with severe hair loss. The results of this study might help identify those at greatest risk of hair loss, and also potential genetic targets for intervention.

  5. Genetic prediction of male pattern baldness.

    Science.gov (United States)

    Hagenaars, Saskia P; Hill, W David; Harris, Sarah E; Ritchie, Stuart J; Davies, Gail; Liewald, David C; Gale, Catharine R; Porteous, David J; Deary, Ian J; Marioni, Riccardo E

    2017-02-01

    Male pattern baldness can have substantial psychosocial effects, and it has been phenotypically linked to adverse health outcomes such as prostate cancer and cardiovascular disease. We explored the genetic architecture of the trait using data from over 52,000 male participants of UK Biobank, aged 40-69 years. We identified over 250 independent genetic loci associated with severe hair loss (P<5x10-8). By splitting the cohort into a discovery sample of 40,000 and target sample of 12,000, we developed a prediction algorithm based entirely on common genetic variants that discriminated (AUC = 0.78, sensitivity = 0.74, specificity = 0.69, PPV = 59%, NPV = 82%) those with no hair loss from those with severe hair loss. The results of this study might help identify those at greatest risk of hair loss, and also potential genetic targets for intervention.

  6. Pavement maintenance scheduling using genetic algorithms

    OpenAIRE

    Yang, Chao; Remenyte-Prescott, Rasa; Andrews, John D.

    2015-01-01

    This paper presents a new pavement management system (PMS) to achieve the optimal pavement maintenance and rehabilitation (M&R) strategy for a highway network using genetic algorithms (GAs). Optimal M&R strategy is a set of pavement activities that both minimise the maintenance cost of a highway network and maximise the pavement condition of the road sections on the network during a certain planning period. NSGA-II, a multi-objective GA, is employed to perform pavement maintenance optimisatio...

  7. An improved genetic algorithm with dynamic topology

    International Nuclear Information System (INIS)

    Cai Kai-Quan; Tang Yan-Wu; Zhang Xue-Jun; Guan Xiang-Min

    2016-01-01

    The genetic algorithm (GA) is a nature-inspired evolutionary algorithm to find optima in search space via the interaction of individuals. Recently, researchers demonstrated that the interaction topology plays an important role in information exchange among individuals of evolutionary algorithm. In this paper, we investigate the effect of different network topologies adopted to represent the interaction structures. It is found that GA with a high-density topology ends up more likely with an unsatisfactory solution, contrarily, a low-density topology can impede convergence. Consequently, we propose an improved GA with dynamic topology, named DT-GA, in which the topology structure varies dynamically along with the fitness evolution. Several experiments executed with 15 well-known test functions have illustrated that DT-GA outperforms other test GAs for making a balance of convergence speed and optimum quality. Our work may have implications in the combination of complex networks and computational intelligence. (paper)

  8. Genetic algorithm optimization of atomic clusters

    International Nuclear Information System (INIS)

    Morris, J.R.; Deaven, D.M.; Ho, K.M.; Wang, C.Z.; Pan, B.C.; Wacker, J.G.; Turner, D.E.; Iowa State Univ., Ames, IA

    1996-01-01

    The authors have been using genetic algorithms to study the structures of atomic clusters and related problems. This is a problem where local minima are easy to locate, but barriers between the many minima are large, and the number of minima prohibit a systematic search. They use a novel mating algorithm that preserves some of the geometrical relationship between atoms, in order to ensure that the resultant structures are likely to inherit the best features of the parent clusters. Using this approach, they have been able to find lower energy structures than had been previously obtained. Most recently, they have been able to turn around the building block idea, using optimized structures from the GA to learn about systematic structural trends. They believe that an effective GA can help provide such heuristic information, and (conversely) that such information can be introduced back into the algorithm to assist in the search process

  9. Optimal hydrogenerator governor tuning with a genetic algorithm

    International Nuclear Information System (INIS)

    Lansberry, J.E.; Wozniak, L.; Goldberg, D.E.

    1992-01-01

    Many techniques exist for developing optimal controllers. This paper investigates genetic algorithms as a means of finding optimal solutions over a parameter space. In particular, the genetic algorithm is applied to optimal tuning of a governor for a hydrogenerator plant. Analog and digital simulation methods are compared for use in conjunction with the genetic algorithm optimization process. It is shown that analog plant simulation provides advantages in speed over digital plant simulation. This speed advantage makes application of the genetic algorithm in an actual plant environment feasible. Furthermore, the genetic algorithm is shown to possess the ability to reject plant noise and other system anomalies in its search for optimizing solutions

  10. Optical flow optimization using parallel genetic algorithm

    Science.gov (United States)

    Zavala-Romero, Olmo; Botella, Guillermo; Meyer-Bäse, Anke; Meyer Base, Uwe

    2011-06-01

    A new approach to optimize the parameters of a gradient-based optical flow model using a parallel genetic algorithm (GA) is proposed. The main characteristics of the optical flow algorithm are its bio-inspiration and robustness against contrast, static patterns and noise, besides working consistently with several optical illusions where other algorithms fail. This model depends on many parameters which conform the number of channels, the orientations required, the length and shape of the kernel functions used in the convolution stage, among many more. The GA is used to find a set of parameters which improve the accuracy of the optical flow on inputs where the ground-truth data is available. This set of parameters helps to understand which of them are better suited for each type of inputs and can be used to estimate the parameters of the optical flow algorithm when used with videos that share similar characteristics. The proposed implementation takes into account the embarrassingly parallel nature of the GA and uses the OpenMP Application Programming Interface (API) to speedup the process of estimating an optimal set of parameters. The information obtained in this work can be used to dynamically reconfigure systems, with potential applications in robotics, medical imaging and tracking.

  11. Grouping genetic algorithms advances and applications

    CERN Document Server

    Mutingi, Michael

    2017-01-01

    This book presents advances and innovations in grouping genetic algorithms, enriched with new and unique heuristic optimization techniques. These algorithms are specially designed for solving industrial grouping problems where system entities are to be partitioned or clustered into efficient groups according to a set of guiding decision criteria. Examples of such problems are: vehicle routing problems, team formation problems, timetabling problems, assembly line balancing, group maintenance planning, modular design, and task assignment. A wide range of industrial grouping problems, drawn from diverse fields such as logistics, supply chain management, project management, manufacturing systems, engineering design and healthcare, are presented. Typical complex industrial grouping problems, with multiple decision criteria and constraints, are clearly described using illustrative diagrams and formulations. The problems are mapped into a common group structure that can conveniently be used as an input scheme to spe...

  12. Using a genetic algorithm to solve fluid-flow problems

    International Nuclear Information System (INIS)

    Pryor, R.J.

    1990-01-01

    Genetic algorithms are based on the mechanics of the natural selection and natural genetics processes. These algorithms are finding increasing application to a wide variety of engineering optimization and machine learning problems. In this paper, the authors demonstrate the use of a genetic algorithm to solve fluid flow problems. Specifically, the authors use the algorithm to solve the one-dimensional flow equations for a pipe

  13. Automatic Data Filter Customization Using a Genetic Algorithm

    Science.gov (United States)

    Mandrake, Lukas

    2013-01-01

    This work predicts whether a retrieval algorithm will usefully determine CO2 concentration from an input spectrum of GOSAT (Greenhouse Gases Observing Satellite). This was done to eliminate needless runtime on atmospheric soundings that would never yield useful results. A space of 50 dimensions was examined for predictive power on the final CO2 results. Retrieval algorithms are frequently expensive to run, and wasted effort defeats requirements and expends needless resources. This algorithm could be used to help predict and filter unneeded runs in any computationally expensive regime. Traditional methods such as the Fischer discriminant analysis and decision trees can attempt to predict whether a sounding will be properly processed. However, this work sought to detect a subsection of the dimensional space that can be simply filtered out to eliminate unwanted runs. LDAs (linear discriminant analyses) and other systems examine the entire data and judge a "best fit," giving equal weight to complex and problematic regions as well as simple, clear-cut regions. In this implementation, a genetic space of "left" and "right" thresholds outside of which all data are rejected was defined. These left/right pairs are created for each of the 50 input dimensions. A genetic algorithm then runs through countless potential filter settings using a JPL computer cluster, optimizing the tossed-out data s yield (proper vs. improper run removal) and number of points tossed. This solution is robust to an arbitrary decision boundary within the data and avoids the global optimization problem of whole-dataset fitting using LDA or decision trees. It filters out runs that would not have produced useful CO2 values to save needless computation. This would be an algorithmic preprocessing improvement to any computationally expensive system.

  14. The genetic algorithm for a signal enhancement

    International Nuclear Information System (INIS)

    Karimova, L.; Kuadykov, E.; Makarenko, N.

    2004-01-01

    The paper is devoted to the problem of time series enhancement, which is based on the analysis of local regularity. The model construction using this analysis does not require any a priori assumption on the structure of the noise and the functional relationship between original signal and noise. The signal itself may be nowhere differentiable with rapidly varying local regularity, what is overcome with the help of the new technique of increasing the local Hoelder regularity of the signal under research. A new signal with prescribed regularity is constructed using the genetic algorithm. This approach is applied to enhancement of time series in the paleoclimatology, solar physics, dendrochronology, meteorology and hydrology

  15. The genetic algorithm for a signal enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Karimova, L. [Laboratory of Computer Modelling, Institute of Mathematics, Pushkin Street 125, 480100 Almaty (Kazakhstan)]. E-mail: karimova@math.kz; Kuadykov, E. [Laboratory of Computer Modelling, Institute of Mathematics, Pushkin Street 125, 480100 Almaty (Kazakhstan); Makarenko, N. [Laboratory of Computer Modelling, Institute of Mathematics, Pushkin Street 125, 480100 Almaty (Kazakhstan)

    2004-11-21

    The paper is devoted to the problem of time series enhancement, which is based on the analysis of local regularity. The model construction using this analysis does not require any a priori assumption on the structure of the noise and the functional relationship between original signal and noise. The signal itself may be nowhere differentiable with rapidly varying local regularity, what is overcome with the help of the new technique of increasing the local Hoelder regularity of the signal under research. A new signal with prescribed regularity is constructed using the genetic algorithm. This approach is applied to enhancement of time series in the paleoclimatology, solar physics, dendrochronology, meteorology and hydrology.

  16. A Tomographic method based on genetic algorithms

    International Nuclear Information System (INIS)

    Turcanu, C.; Alecu, L.; Craciunescu, T.; Niculae, C.

    1997-01-01

    Computerized tomography being a non-destructive and non-evasive technique is frequently used in medical application to generate three dimensional images of objects. Genetic algorithms are efficient, domain independent for a large variety of problems. The proposed method produces good quality reconstructions even in case of very small number of projection angles. It requests no a priori knowledge about the solution and takes into account the statistical uncertainties. The main drawback of the method is the amount of computer memory and time needed. (author)

  17. Genetic Algorithms Principles Towards Hidden Markov Model

    Directory of Open Access Journals (Sweden)

    Nabil M. Hewahi

    2011-10-01

    Full Text Available In this paper we propose a general approach based on Genetic Algorithms (GAs to evolve Hidden Markov Models (HMM. The problem appears when experts assign probability values for HMM, they use only some limited inputs. The assigned probability values might not be accurate to serve in other cases related to the same domain. We introduce an approach based on GAs to find
    out the suitable probability values for the HMM to be mostly correct in more cases than what have been used to assign the probability values.

  18. Convergence analysis of canonical genetic algorithms.

    Science.gov (United States)

    Rudolph, G

    1994-01-01

    This paper analyzes the convergence properties of the canonical genetic algorithm (CGA) with mutation, crossover and proportional reproduction applied to static optimization problems. It is proved by means of homogeneous finite Markov chain analysis that a CGA will never converge to the global optimum regardless of the initialization, crossover, operator and objective function. But variants of CGA's that always maintain the best solution in the population, either before or after selection, are shown to converge to the global optimum due to the irreducibility property of the underlying original nonconvergent CGA. These results are discussed with respect to the schema theorem.

  19. Comparison of genetic algorithms with conjugate gradient methods

    Science.gov (United States)

    Bosworth, J. L.; Foo, N. Y.; Zeigler, B. P.

    1972-01-01

    Genetic algorithms for mathematical function optimization are modeled on search strategies employed in natural adaptation. Comparisons of genetic algorithms with conjugate gradient methods, which were made on an IBM 1800 digital computer, show that genetic algorithms display superior performance over gradient methods for functions which are poorly behaved mathematically, for multimodal functions, and for functions obscured by additive random noise. Genetic methods offer performance comparable to gradient methods for many of the standard functions.

  20. Instrument design and optimization using genetic algorithms

    International Nuclear Information System (INIS)

    Hoelzel, Robert; Bentley, Phillip M.; Fouquet, Peter

    2006-01-01

    This article describes the design of highly complex physical instruments by using a canonical genetic algorithm (GA). The procedure can be applied to all instrument designs where performance goals can be quantified. It is particularly suited to the optimization of instrument design where local optima in the performance figure of merit are prevalent. Here, a GA is used to evolve the design of the neutron spin-echo spectrometer WASP which is presently being constructed at the Institut Laue-Langevin, Grenoble, France. A comparison is made between this artificial intelligence approach and the traditional manual design methods. We demonstrate that the search of parameter space is more efficient when applying the genetic algorithm, and the GA produces a significantly better instrument design. Furthermore, it is found that the GA increases flexibility, by facilitating the reoptimization of the design after changes in boundary conditions during the design phase. The GA also allows the exploration of 'nonstandard' magnet coil geometries. We conclude that this technique constitutes a powerful complementary tool for the design and optimization of complex scientific apparatus, without replacing the careful thought processes employed in traditional design methods

  1. Instrument design and optimization using genetic algorithms

    Science.gov (United States)

    Hölzel, Robert; Bentley, Phillip M.; Fouquet, Peter

    2006-10-01

    This article describes the design of highly complex physical instruments by using a canonical genetic algorithm (GA). The procedure can be applied to all instrument designs where performance goals can be quantified. It is particularly suited to the optimization of instrument design where local optima in the performance figure of merit are prevalent. Here, a GA is used to evolve the design of the neutron spin-echo spectrometer WASP which is presently being constructed at the Institut Laue-Langevin, Grenoble, France. A comparison is made between this artificial intelligence approach and the traditional manual design methods. We demonstrate that the search of parameter space is more efficient when applying the genetic algorithm, and the GA produces a significantly better instrument design. Furthermore, it is found that the GA increases flexibility, by facilitating the reoptimization of the design after changes in boundary conditions during the design phase. The GA also allows the exploration of "nonstandard" magnet coil geometries. We conclude that this technique constitutes a powerful complementary tool for the design and optimization of complex scientific apparatus, without replacing the careful thought processes employed in traditional design methods.

  2. Study on characteristic points of boiling curve by using wavelet analysis and genetic algorithm

    International Nuclear Information System (INIS)

    Wei Huiming; Su Guanghui; Qiu Suizheng; Yang Xingbo

    2009-01-01

    Based on the wavelet analysis theory of signal singularity detection,the critical heat flux (CHF) and minimum film boiling starting point (q min ) of boiling curves can be detected and analyzed by using the wavelet multi-resolution analysis. To predict the CHF in engineering, empirical relations were obtained based on genetic algorithm. The results of wavelet detection and genetic algorithm prediction are consistent with experimental data very well. (authors)

  3. Machine learning algorithms for datasets popularity prediction

    CERN Document Server

    Kancys, Kipras

    2016-01-01

    This report represents continued study where ML algorithms were used to predict databases popularity. Three topics were covered. First of all, there was a discrepancy between old and new meta-data collection procedures, so a reason for that had to be found. Secondly, different parameters were analysed and dropped to make algorithms perform better. And third, it was decided to move modelling part on Spark.

  4. Combining neural networks and genetic algorithms for hydrological flow forecasting

    Science.gov (United States)

    Neruda, Roman; Srejber, Jan; Neruda, Martin; Pascenko, Petr

    2010-05-01

    We present a neural network approach to rainfall-runoff modeling for small size river basins based on several time series of hourly measured data. Different neural networks are considered for short time runoff predictions (from one to six hours lead time) based on runoff and rainfall data observed in previous time steps. Correlation analysis shows that runoff data, short time rainfall history, and aggregated API values are the most significant data for the prediction. Neural models of multilayer perceptron and radial basis function networks with different numbers of units are used and compared with more traditional linear time series predictors. Out of possible 48 hours of relevant history of all the input variables, the most important ones are selected by means of input filters created by a genetic algorithm. The genetic algorithm works with population of binary encoded vectors defining input selection patterns. Standard genetic operators of two-point crossover, random bit-flipping mutation, and tournament selection were used. The evaluation of objective function of each individual consists of several rounds of building and testing a particular neural network model. The whole procedure is rather computational exacting (taking hours to days on a desktop PC), thus a high-performance mainframe computer has been used for our experiments. Results based on two years worth data from the Ploucnice river in Northern Bohemia suggest that main problems connected with this approach to modeling are ovetraining that can lead to poor generalization, and relatively small number of extreme events which makes it difficult for a model to predict the amplitude of the event. Thus, experiments with both absolute and relative runoff predictions were carried out. In general it can be concluded that the neural models show about 5 per cent improvement in terms of efficiency coefficient over liner models. Multilayer perceptrons with one hidden layer trained by back propagation algorithm and

  5. A novel progressively swarmed mixed integer genetic algorithm for ...

    African Journals Online (AJOL)

    MIGA) which inherits the advantages of binary and real coded Genetic Algorithm approach. The proposed algorithm is applied for the conventional generation cost minimization Optimal Power Flow (OPF) problem and for the Security ...

  6. Optimal support arrangement of piping systems using genetic algorithm

    International Nuclear Information System (INIS)

    Chiba, T.; Okado, S.; Fujii, I.; Itami, K.

    1996-01-01

    The support arrangement is one of the important factors in the design of piping systems. Much time is required to decide the arrangement of the supports. The authors applied a genetic algorithm to find the optimum support arrangement for piping systems. Examples are provided to illustrate the effectiveness of the genetic algorithm. Good results are obtained when applying the genetic algorithm to the actual designing of the piping system

  7. New Algorithm of Automatic Complex Password Generator Employing Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Sura Jasim Mohammed

    2018-01-01

    Full Text Available Due to the occurred increasing in information sharing, internet popularization, E-commerce transactions, and data transferring, security and authenticity become an important and necessary subject. In this paper an automated schema was proposed to generate a strong and complex password which is based on entering initial data such as text (meaningful and simple information or not, with the concept of encoding it, then employing the Genetic Algorithm by using its operations crossover and mutation to generated different data from the entered one. The generated password is non-guessable and can be used in many and different applications and internet services like social networks, secured system, distributed systems, and online services. The proposed password generator achieved diffusion, randomness, and confusions, which are very necessary, required and targeted in the resulted password, in addition to the notice that the length of the generated password differs from the length of initial data, and any simple changing and modification in the initial data produces more and clear modification in the generated password. The proposed work was done using visual basic programing language.

  8. Application of genetic algorithm to control design

    International Nuclear Information System (INIS)

    Lee, Yoon Joon; Cho, Kyung Ho

    1995-01-01

    A classical PID controller is designed by applying the GA (Genetic Algorithm) which searches the optimal parameters through three major operators of reproduction, crossover and mutation under the given constraints. The GA could minimize the designer's interference and the whole design process could easily be automated. In contrast with other traditional PID design methods which allows for the system output responses only, the design with the GA can take account of the magnitude or the rate of change of control input together with the output responses, which reflects the more realistic situations. Compared with other PIDs designed by the traditional methods such as Ziegler and analytic, the PID by the GA shows the superior response characteristics to those of others with the least control input energy

  9. Genetic algorithm for building envelope calibration

    International Nuclear Information System (INIS)

    Ramos Ruiz, Germán; Fernández Bandera, Carlos; Gómez-Acebo Temes, Tomás; Sánchez-Ostiz Gutierrez, Ana

    2016-01-01

    Highlights: • Calibration methodology using Multi-Objective Genetic Algorithm (NSGA-II). • Uncertainty analysis formulas implemented directly in EnergyPlus. • The methodology captures the heat dynamic of the building with a high level of accuracy. • Reduction in the number of parameters involved due to sensitivity analysis. • Cost-effective methodology using temperature sensors only. - Abstract: Buildings today represent 40% of world primary energy consumption and 24% of greenhouse gas emissions. In our society there is growing interest in knowing precisely when and how energy consumption occurs. This means that consumption measurement and verification plans are well-advanced. International agencies such as Efficiency Valuation Organization (EVO) and International Performance Measurement and Verification Protocol (IPMVP) have developed methodologies to quantify savings. This paper presents a methodology to accurately perform automated envelope calibration under option D (calibrated simulation) of IPMVP – vol. 1. This is frequently ignored because of its complexity, despite being more flexible and accurate in assessing the energy performance of a building. A detailed baseline energy model is used, and by means of a metaheuristic technique achieves a highly reliable and accurate Building Energy Simulation (BES) model suitable for detailed analysis of saving strategies. In order to find this BES model a Genetic Algorithm (NSGA-II) is used, together with a highly efficient engine to stimulate the objective, thus permitting rapid achievement of the goal. The result is a BES model that broadly captures the heat dynamic behaviour of the building. The model amply fulfils the parameters demanded by ASHRAE and EVO under option D.

  10. A NEW HYBRID GENETIC ALGORITHM FOR VERTEX COVER PROBLEM

    OpenAIRE

    UĞURLU, Onur

    2015-01-01

    The minimum vertex cover  problem belongs to the  class  of  NP-compl ete  graph  theoretical problems. This paper presents a hybrid genetic algorithm to solve minimum ver tex cover problem. In this paper, it has been shown that when local optimization technique is added t o genetic algorithm to form hybrid genetic algorithm, it gives more quality solution than simple genet ic algorithm. Also, anew mutation operator has been developed especially for minimum verte...

  11. Using Genetic Algorithms for Building Metrics of Collaborative Systems

    Directory of Open Access Journals (Sweden)

    Cristian CIUREA

    2011-01-01

    Full Text Available he paper objective is to reveal the importance of genetic algorithms in building robust metrics of collaborative systems. The main types of collaborative systems in economy are presented and some characteristics of genetic algorithms are described. A genetic algorithm was implemented in order to determine the local maximum and minimum points of the relative complexity function associated to a collaborative banking system. The intelligent collaborative systems based on genetic algorithms, representing the new generation of collaborative systems, are analyzed and the implementation of auto-adaptive interfaces in a banking application is described.

  12. Improvement of ECM Techniques through Implementation of a Genetic Algorithm

    National Research Council Canada - National Science Library

    Townsend, James D

    2008-01-01

    This research effort develops the necessary interfaces between the radar signal processing components and an optimization routine, such as genetic algorithms, to develop Electronic Countermeasure (ECM...

  13. Dynamic airspace configuration by genetic algorithm

    Directory of Open Access Journals (Sweden)

    Marina Sergeeva

    2017-06-01

    Full Text Available With the continuous air traffic growth and limits of resources, there is a need for reducing the congestion of the airspace systems. Nowadays, several projects are launched, aimed at modernizing the global air transportation system and air traffic management. In recent years, special interest has been paid to the solution of the dynamic airspace configuration problem. Airspace sector configurations need to be dynamically adjusted to provide maximum efficiency and flexibility in response to changing weather and traffic conditions. The main objective of this work is to automatically adapt the airspace configurations according to the evolution of traffic. In order to reach this objective, the airspace is considered to be divided into predefined 3D airspace blocks which have to be grouped or ungrouped depending on the traffic situation. The airspace structure is represented as a graph and each airspace configuration is created using a graph partitioning technique. We optimize airspace configurations using a genetic algorithm. The developed algorithm generates a sequence of sector configurations for one day of operation with the minimized controller workload. The overall methodology is implemented and successfully tested with air traffic data taken for one day and for several different airspace control areas of Europe.

  14. Optimizing doped libraries by using genetic algorithms

    Science.gov (United States)

    Tomandl, Dirk; Schober, Andreas; Schwienhorst, Andreas

    1997-01-01

    The insertion of random sequences into protein-encoding genes in combination with biologicalselection techniques has become a valuable tool in the design of molecules that have usefuland possibly novel properties. By employing highly effective screening protocols, a functionaland unique structure that had not been anticipated can be distinguished among a hugecollection of inactive molecules that together represent all possible amino acid combinations.This technique is severely limited by its restriction to a library of manageable size. Oneapproach for limiting the size of a mutant library relies on `doping schemes', where subsetsof amino acids are generated that reveal only certain combinations of amino acids in a proteinsequence. Three mononucleotide mixtures for each codon concerned must be designed, suchthat the resulting codons that are assembled during chemical gene synthesis represent thedesired amino acid mixture on the level of the translated protein. In this paper we present adoping algorithm that `reverse translates' a desired mixture of certain amino acids into threemixtures of mononucleotides. The algorithm is designed to optimally bias these mixturestowards the codons of choice. This approach combines a genetic algorithm with localoptimization strategies based on the downhill simplex method. Disparate relativerepresentations of all amino acids (and stop codons) within a target set can be generated.Optional weighing factors are employed to emphasize the frequencies of certain amino acidsand their codon usage, and to compensate for reaction rates of different mononucleotidebuilding blocks (synthons) during chemical DNA synthesis. The effect of statistical errors thataccompany an experimental realization of calculated nucleotide mixtures on the generatedmixtures of amino acids is simulated. These simulations show that the robustness of differentoptima with respect to small deviations from calculated values depends on their concomitantfitness. Furthermore

  15. Warehouse stocking optimization based on dynamic ant colony genetic algorithm

    Science.gov (United States)

    Xiao, Xiaoxu

    2018-04-01

    In view of the various orders of FAW (First Automotive Works) International Logistics Co., Ltd., the SLP method is used to optimize the layout of the warehousing units in the enterprise, thus the warehouse logistics is optimized and the external processing speed of the order is improved. In addition, the relevant intelligent algorithms for optimizing the stocking route problem are analyzed. The ant colony algorithm and genetic algorithm which have good applicability are emphatically studied. The parameters of ant colony algorithm are optimized by genetic algorithm, which improves the performance of ant colony algorithm. A typical path optimization problem model is taken as an example to prove the effectiveness of parameter optimization.

  16. Selfish Gene Algorithm Vs Genetic Algorithm: A Review

    Science.gov (United States)

    Ariff, Norharyati Md; Khalid, Noor Elaiza Abdul; Hashim, Rathiah; Noor, Noorhayati Mohamed

    2016-11-01

    Evolutionary algorithm is one of the algorithms inspired by the nature. Within little more than a decade hundreds of papers have reported successful applications of EAs. In this paper, the Selfish Gene Algorithms (SFGA), as one of the latest evolutionary algorithms (EAs) inspired from the Selfish Gene Theory which is an interpretation of Darwinian Theory ideas from the biologist Richards Dawkins on 1989. In this paper, following a brief introduction to the Selfish Gene Algorithm (SFGA), the chronology of its evolution is presented. It is the purpose of this paper is to present an overview of the concepts of Selfish Gene Algorithm (SFGA) as well as its opportunities and challenges. Accordingly, the history, step involves in the algorithm are discussed and its different applications together with an analysis of these applications are evaluated.

  17. Dynamic modeling of genetic networks using genetic algorithm and S-system.

    Science.gov (United States)

    Kikuchi, Shinichi; Tominaga, Daisuke; Arita, Masanori; Takahashi, Katsutoshi; Tomita, Masaru

    2003-03-22

    The modeling of system dynamics of genetic networks, metabolic networks or signal transduction cascades from time-course data is formulated as a reverse-problem. Previous studies focused on the estimation of only network structures, and they were ineffective in inferring a network structure with feedback loops. We previously proposed a method to predict not only the network structure but also its dynamics using a Genetic Algorithm (GA) and an S-system formalism. However, it could predict only a small number of parameters and could rarely obtain essential structures. In this work, we propose a unified extension of the basic method. Notable improvements are as follows: (1) an additional term in its evaluation function that aims at eliminating futile parameters; (2) a crossover method called Simplex Crossover (SPX) to improve its optimization ability; and (3) a gradual optimization strategy to increase the number of predictable parameters. The proposed method is implemented as a C program called PEACE1 (Predictor by Evolutionary Algorithms and Canonical Equations 1). Its performance was compared with the basic method. The comparison showed that: (1) the convergence rate increased about 5-fold; (2) the optimization speed was raised about 1.5-fold; and (3) the number of predictable parameters was increased about 5-fold. Moreover, we successfully inferred the dynamics of a small genetic network constructed with 60 parameters for 5 network variables and feedback loops using only time-course data of gene expression.

  18. Solving Hub Network Problem Using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Mursyid Hasan Basri

    2012-01-01

    non-linearity, so there is no guarantee to find the optimal solution. Moreover, it has generated a great number of variables. Therefore, a heuristic method is required to find near optimal solution with reasonable computation time. For this reason, a genetic algorithm (GA-based procedure is proposed. The proposed procedure then is applied to the same problem as discussed in the basic model. The results indicated that there is significant improvement on hub locations. Flows are successfully consolidated to several big ports as expected. With regards to spoke allocations, however, spokes are not fairly allocated.Keywords: Hub and Spoke Model; Marine Transportation; Genetic Algorithm

  19. Global Optimization of a Periodic System using a Genetic Algorithm

    Science.gov (United States)

    Stucke, David; Crespi, Vincent

    2001-03-01

    We use a novel application of a genetic algorithm global optimizatin technique to find the lowest energy structures for periodic systems. We apply this technique to colloidal crystals for several different stoichiometries of binary and trinary colloidal crystals. This application of a genetic algorithm is decribed and results of likely candidate structures are presented.

  20. Modeling of genetic algorithms with a finite population

    NARCIS (Netherlands)

    C.H.M. van Kemenade

    1997-01-01

    textabstractCross-competition between non-overlapping building blocks can strongly influence the performance of evolutionary algorithms. The choice of the selection scheme can have a strong influence on the performance of a genetic algorithm. This paper describes a number of different genetic

  1. Genetic algorithms applied to nuclear reactor design optimization

    International Nuclear Information System (INIS)

    Pereira, C.M.N.A.; Schirru, R.; Martinez, A.S.

    2000-01-01

    A genetic algorithm is a powerful search technique that simulates natural evolution in order to fit a population of computational structures to the solution of an optimization problem. This technique presents several advantages over classical ones such as linear programming based techniques, often used in nuclear engineering optimization problems. However, genetic algorithms demand some extra computational cost. Nowadays, due to the fast computers available, the use of genetic algorithms has increased and its practical application has become a reality. In nuclear engineering there are many difficult optimization problems related to nuclear reactor design. Genetic algorithm is a suitable technique to face such kind of problems. This chapter presents applications of genetic algorithms for nuclear reactor core design optimization. A genetic algorithm has been designed to optimize the nuclear reactor cell parameters, such as array pitch, isotopic enrichment, dimensions and cells materials. Some advantages of this genetic algorithm implementation over a classical method based on linear programming are revealed through the application of both techniques to a simple optimization problem. In order to emphasize the suitability of genetic algorithms for design optimization, the technique was successfully applied to a more complex problem, where the classical method is not suitable. Results and comments about the applications are also presented. (orig.)

  2. A "Hands on" Strategy for Teaching Genetic Algorithms to Undergraduates

    Science.gov (United States)

    Venables, Anne; Tan, Grace

    2007-01-01

    Genetic algorithms (GAs) are a problem solving strategy that uses stochastic search. Since their introduction (Holland, 1975), GAs have proven to be particularly useful for solving problems that are "intractable" using classical methods. The language of genetic algorithms (GAs) is heavily laced with biological metaphors from evolutionary…

  3. Using Genetic Algorithms in Secured Business Intelligence Mobile Applications

    Directory of Open Access Journals (Sweden)

    Silvia TRIF

    2011-01-01

    Full Text Available The paper aims to assess the use of genetic algorithms for training neural networks used in secured Business Intelligence Mobile Applications. A comparison is made between classic back-propagation method and a genetic algorithm based training. The design of these algorithms is presented. A comparative study is realized for determining the better way of training neural networks, from the point of view of time and memory usage. The results show that genetic algorithms based training offer better performance and memory usage than back-propagation and they are fit to be implemented on mobile devices.

  4. Approximation algorithms for a genetic diagnostics problem.

    Science.gov (United States)

    Kosaraju, S R; Schäffer, A A; Biesecker, L G

    1998-01-01

    We define and study a combinatorial problem called WEIGHTED DIAGNOSTIC COVER (WDC) that models the use of a laboratory technique called genotyping in the diagnosis of an important class of chromosomal aberrations. An optimal solution to WDC would enable us to define a genetic assay that maximizes the diagnostic power for a specified cost of laboratory work. We develop approximation algorithms for WDC by making use of the well-known problem SET COVER for which the greedy heuristic has been extensively studied. We prove worst-case performance bounds on the greedy heuristic for WDC and for another heuristic we call directional greedy. We implemented both heuristics. We also implemented a local search heuristic that takes the solutions obtained by greedy and dir-greedy and applies swaps until they are locally optimal. We report their performance on a real data set that is representative of the options that a clinical geneticist faces for the real diagnostic problem. Many open problems related to WDC remain, both of theoretical interest and practical importance.

  5. Multiobjective Genetic Algorithm applied to dengue control.

    Science.gov (United States)

    Florentino, Helenice O; Cantane, Daniela R; Santos, Fernando L P; Bannwart, Bettina F

    2014-12-01

    Dengue fever is an infectious disease caused by a virus of the Flaviridae family and transmitted to the person by a mosquito of the genus Aedes aegypti. This disease has been a global public health problem because a single mosquito can infect up to 300 people and between 50 and 100 million people are infected annually on all continents. Thus, dengue fever is currently a subject of research, whether in the search for vaccines and treatments for the disease or efficient and economical forms of mosquito control. The current study aims to study techniques of multiobjective optimization to assist in solving problems involving the control of the mosquito that transmits dengue fever. The population dynamics of the mosquito is studied in order to understand the epidemic phenomenon and suggest strategies of multiobjective programming for mosquito control. A Multiobjective Genetic Algorithm (MGA_DENGUE) is proposed to solve the optimization model treated here and we discuss the computational results obtained from the application of this technique. Copyright © 2014 Elsevier Inc. All rights reserved.

  6. Genetic algorithm based separation cascade optimization

    International Nuclear Information System (INIS)

    Mahendra, A.K.; Sanyal, A.; Gouthaman, G.; Bera, T.K.

    2008-01-01

    The conventional separation cascade design procedure does not give an optimum design because of squaring-off, variation of flow rates and separation factor of the element with respect to stage location. Multi-component isotope separation further complicates the design procedure. Cascade design can be stated as a constrained multi-objective optimization. Cascade's expectation from the separating element is multi-objective i.e. overall separation factor, cut, optimum feed and separative power. Decision maker may aspire for more comprehensive multi-objective goals where optimization of cascade is coupled with the exploration of separating element optimization vector space. In real life there are many issues which make it important to understand the decision maker's perception of cost-quality-speed trade-off and consistency of preferences. Genetic algorithm (GA) is one such evolutionary technique that can be used for cascade design optimization. This paper addresses various issues involved in the GA based multi-objective optimization of the separation cascade. Reference point based optimization methodology with GA based Pareto optimality concept for separation cascade was found pragmatic and promising. This method should be explored, tested, examined and further developed for binary as well as multi-component separations. (author)

  7. Hydro Power Reservoir Aggregation via Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Markus Löschenbrand

    2017-12-01

    Full Text Available Electrical power systems with a high share of hydro power in their generation portfolio tend to display distinct behavior. Low generation cost and the possibility of peak shaving create a high amount of flexibility. However, stochastic influences such as precipitation and external market effects create uncertainty and thus establish a wide range of potential outcomes. Therefore, optimal generation scheduling is a key factor to successful operation of hydro power dominated systems. This paper aims to bridge the gap between scheduling on large-scale (e.g., national and small scale (e.g., a single river basin levels, by applying a multi-objective master/sub-problem framework supported by genetic algorithms. A real-life case study from southern Norway is used to assess the validity of the method and give a proof of concept. The introduced method can be applied to efficiently integrate complex stochastic sub-models into Virtual Power Plants and thus reduce the computational complexity of large-scale models whilst minimizing the loss of information.

  8. Advanced optimization of permanent magnet wigglers using a genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Hajima, Ryoichi [Univ. of Tokyo (Japan)

    1995-12-31

    In permanent magnet wigglers, magnetic imperfection of each magnet piece causes field error. This field error can be reduced or compensated by sorting magnet pieces in proper order. We showed a genetic algorithm has good property for this sorting scheme. In this paper, this optimization scheme is applied to the case of permanent magnets which have errors in the direction of field. The result shows the genetic algorithm is superior to other algorithms.

  9. Advanced optimization of permanent magnet wigglers using a genetic algorithm

    International Nuclear Information System (INIS)

    Hajima, Ryoichi

    1995-01-01

    In permanent magnet wigglers, magnetic imperfection of each magnet piece causes field error. This field error can be reduced or compensated by sorting magnet pieces in proper order. We showed a genetic algorithm has good property for this sorting scheme. In this paper, this optimization scheme is applied to the case of permanent magnets which have errors in the direction of field. The result shows the genetic algorithm is superior to other algorithms

  10. Applicability of genetic algorithms to parameter estimation of economic models

    Directory of Open Access Journals (Sweden)

    Marcel Ševela

    2004-01-01

    Full Text Available The paper concentrates on capability of genetic algorithms for parameter estimation of non-linear economic models. In the paper we test the ability of genetic algorithms to estimate of parameters of demand function for durable goods and simultaneously search for parameters of genetic algorithm that lead to maximum effectiveness of the computation algorithm. The genetic algorithms connect deterministic iterative computation methods with stochastic methods. In the genteic aůgorithm approach each possible solution is represented by one individual, those life and lifes of all generations of individuals run under a few parameter of genetic algorithm. Our simulations resulted in optimal mutation rate of 15% of all bits in chromosomes, optimal elitism rate 20%. We can not set the optimal extend of generation, because it proves positive correlation with effectiveness of genetic algorithm in all range under research, but its impact is degreasing. The used genetic algorithm was sensitive to mutation rate at most, than to extend of generation. The sensitivity to elitism rate is not so strong.

  11. Genetic algorithm based support vector machine regression in predicting wave transmission of horizontally interlaced multi-layer moored floating pipe breakwater

    Digital Repository Service at National Institute of Oceanography (India)

    Patil, S.G.; Mandal, S.; Hegde, A.V.

    studies on floating breakwaters in the past but failed to give a simple mathematical model to predict the wave transmission through floating breakwaters by considering all the boundary conditions. Computational intelligence techniques, such as, Artificial...

  12. A genetic algorithm for solving supply chain network design model

    Science.gov (United States)

    Firoozi, Z.; Ismail, N.; Ariafar, S. H.; Tang, S. H.; Ariffin, M. K. M. A.

    2013-09-01

    Network design is by nature costly and optimization models play significant role in reducing the unnecessary cost components of a distribution network. This study proposes a genetic algorithm to solve a distribution network design model. The structure of the chromosome in the proposed algorithm is defined in a novel way that in addition to producing feasible solutions, it also reduces the computational complexity of the algorithm. Computational results are presented to show the algorithm performance.

  13. Absolute GPS Positioning Using Genetic Algorithms

    Science.gov (United States)

    Ramillien, G.

    A new inverse approach for restoring the absolute coordinates of a ground -based station from three or four observed GPS pseudo-ranges is proposed. This stochastic method is based on simulations of natural evolution named genetic algorithms (GA). These iterative procedures provide fairly good and robust estimates of the absolute positions in the Earth's geocentric reference system. For comparison/validation, GA results are compared to the ones obtained using the classical linearized least-square scheme for the determination of the XYZ location proposed by Bancroft (1985) which is strongly limited by the number of available observations (i.e. here, the number of input pseudo-ranges must be four). The r.m.s. accuracy of the non -linear cost function reached by this latter method is typically ~10-4 m2 corresponding to ~300-500-m accuracies for each geocentric coordinate. However, GA can provide more acceptable solutions (r.m.s. errors < 10-5 m2), even when only three instantaneous pseudo-ranges are used, such as a lost of lock during a GPS survey. Tuned GA parameters used in different simulations are N=1000 starting individuals, as well as Pc=60-70% and Pm=30-40% for the crossover probability and mutation rate, respectively. Statistical tests on the ability of GA to recover acceptable coordinates in presence of important levels of noise are made simulating nearly 3000 random samples of erroneous pseudo-ranges. Here, two main sources of measurement errors are considered in the inversion: (1) typical satellite-clock errors and/or 300-metre variance atmospheric delays, and (2) Geometrical Dilution of Precision (GDOP) due to the particular GPS satellite configuration at the time of acquisition. Extracting valuable information and even from low-quality starting range observations, GA offer an interesting alternative for high -precision GPS positioning.

  14. Development of a Thermal Equilibrium Prediction Algorithm

    International Nuclear Information System (INIS)

    Aviles-Ramos, Cuauhtemoc

    2002-01-01

    A thermal equilibrium prediction algorithm is developed and tested using a heat conduction model and data sets from calorimetric measurements. The physical model used in this study is the exact solution of a system of two partial differential equations that govern the heat conduction in the calorimeter. A multi-parameter estimation technique is developed and implemented to estimate the effective volumetric heat generation and thermal diffusivity in the calorimeter measurement chamber, and the effective thermal diffusivity of the heat flux sensor. These effective properties and the exact solution are used to predict the heat flux sensor voltage readings at thermal equilibrium. Thermal equilibrium predictions are carried out considering only 20% of the total measurement time required for thermal equilibrium. A comparison of the predicted and experimental thermal equilibrium voltages shows that the average percentage error from 330 data sets is only 0.1%. The data sets used in this study come from calorimeters of different sizes that use different kinds of heat flux sensors. Furthermore, different nuclear material matrices were assayed in the process of generating these data sets. This study shows that the integration of this algorithm into the calorimeter data acquisition software will result in an 80% reduction of measurement time. This reduction results in a significant cutback in operational costs for the calorimetric assay of nuclear materials. (authors)

  15. Optimization of Pressurizer Based on Genetic-Simplex Algorithm

    International Nuclear Information System (INIS)

    Wang, Cheng; Yan, Chang Qi; Wang, Jian Jun

    2014-01-01

    Pressurizer is one of key components in nuclear power system. It's important to control the dimension in the design of pressurizer through optimization techniques. In this work, a mathematic model of a vertical electric heating pressurizer was established. A new Genetic-Simplex Algorithm (GSA) that combines genetic algorithm and simplex algorithm was developed to enhance the searching ability, and the comparison among modified and original algorithms is conducted by calculating the benchmark function. Furthermore, the optimization design of pressurizer, taking minimization of volume and net weight as objectives, was carried out considering thermal-hydraulic and geometric constraints through GSA. The results indicate that the mathematical model is agreeable for the pressurizer and the new algorithm is more effective than the traditional genetic algorithm. The optimization design shows obvious validity and can provide guidance for real engineering design

  16. Predicting disease risk using bootstrap ranking and classification algorithms.

    Directory of Open Access Journals (Sweden)

    Ohad Manor

    Full Text Available Genome-wide association studies (GWAS are widely used to search for genetic loci that underlie human disease. Another goal is to predict disease risk for different individuals given their genetic sequence. Such predictions could either be used as a "black box" in order to promote changes in life-style and screening for early diagnosis, or as a model that can be studied to better understand the mechanism of the disease. Current methods for risk prediction typically rank single nucleotide polymorphisms (SNPs by the p-value of their association with the disease, and use the top-associated SNPs as input to a classification algorithm. However, the predictive power of such methods is relatively poor. To improve the predictive power, we devised BootRank, which uses bootstrapping in order to obtain a robust prioritization of SNPs for use in predictive models. We show that BootRank improves the ability to predict disease risk of unseen individuals in the Wellcome Trust Case Control Consortium (WTCCC data and results in a more robust set of SNPs and a larger number of enriched pathways being associated with the different diseases. Finally, we show that combining BootRank with seven different classification algorithms improves performance compared to previous studies that used the WTCCC data. Notably, diseases for which BootRank results in the largest improvements were recently shown to have more heritability than previously thought, likely due to contributions from variants with low minimum allele frequency (MAF, suggesting that BootRank can be beneficial in cases where SNPs affecting the disease are poorly tagged or have low MAF. Overall, our results show that improving disease risk prediction from genotypic information may be a tangible goal, with potential implications for personalized disease screening and treatment.

  17. Genetic algorithms and experimental discrimination of SUSY models

    International Nuclear Information System (INIS)

    Allanach, B.C.; Quevedo, F.; Grellscheid, D.

    2004-01-01

    We introduce genetic algorithms as a means to estimate the accuracy required to discriminate among different models using experimental observables. We exemplify the technique in the context of the minimal supersymmetric standard model. If supersymmetric particles are discovered, models of supersymmetry breaking will be fit to the observed spectrum and it is beneficial to ask beforehand: what accuracy is required to always allow the discrimination of two particular models and which are the most important masses to observe? Each model predicts a bounded patch in the space of observables once unknown parameters are scanned over. The questions can be answered by minimising a 'distance' measure between the two hypersurfaces. We construct a distance measure that scales like a constant fraction of an observable, since that is how the experimental errors are expected to scale. Genetic algorithms, including concepts such as natural selection, fitness and mutations, provide a solution to the minimisation problem. We illustrate the efficiency of the method by comparing three different classes of string models for which the above questions could not be answered with previous techniques. The required accuracy is in the range accessible to the Large Hadron Collider (LHC) when combined with a future linear collider (LC) facility. The technique presented here can be applied to more general classes of models or observables. (author)

  18. Genetic Algorithm Based Economic Dispatch with Valve Point Effect

    Energy Technology Data Exchange (ETDEWEB)

    Park, Jong Nam; Park, Kyung Won; Kim, Ji Hong; Kim, Jin O [Hanyang University (Korea, Republic of)

    1999-03-01

    This paper presents a new approach on genetic algorithm to economic dispatch problem for valve point discontinuities. Proposed approach in this paper on genetic algorithms improves the performance to solve economic dispatch problem for valve point discontinuities through improved death penalty method, generation-apart elitism, atavism and sexual selection with sexual distinction. Numerical results on a test system consisting of 13 thermal units show that the proposed approach is faster, more robust and powerful than conventional genetic algorithms. (author). 8 refs., 10 figs.

  19. Application of genetic algorithms for parameter estimation in liquid chromatography

    International Nuclear Information System (INIS)

    Hernandez Torres, Reynier; Irizar Mesa, Mirtha; Tavares Camara, Leoncio Diogenes

    2012-01-01

    In chromatography, complex inverse problems related to the parameters estimation and process optimization are presented. Metaheuristics methods are known as general purpose approximated algorithms which seek and hopefully find good solutions at a reasonable computational cost. These methods are iterative process to perform a robust search of a solution space. Genetic algorithms are optimization techniques based on the principles of genetics and natural selection. They have demonstrated very good performance as global optimizers in many types of applications, including inverse problems. In this work, the effectiveness of genetic algorithms is investigated to estimate parameters in liquid chromatography

  20. Efficient predictive algorithms for image compression

    CERN Document Server

    Rosário Lucas, Luís Filipe; Maciel de Faria, Sérgio Manuel; Morais Rodrigues, Nuno Miguel; Liberal Pagliari, Carla

    2017-01-01

    This book discusses efficient prediction techniques for the current state-of-the-art High Efficiency Video Coding (HEVC) standard, focusing on the compression of a wide range of video signals, such as 3D video, Light Fields and natural images. The authors begin with a review of the state-of-the-art predictive coding methods and compression technologies for both 2D and 3D multimedia contents, which provides a good starting point for new researchers in the field of image and video compression. New prediction techniques that go beyond the standardized compression technologies are then presented and discussed. In the context of 3D video, the authors describe a new predictive algorithm for the compression of depth maps, which combines intra-directional prediction, with flexible block partitioning and linear residue fitting. New approaches are described for the compression of Light Field and still images, which enforce sparsity constraints on linear models. The Locally Linear Embedding-based prediction method is in...

  1. Research and Applications of Shop Scheduling Based on Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Hang ZHAO

    Full Text Available ABSTRACT Shop Scheduling is an important factor affecting the efficiency of production, efficient scheduling method and a research and application for optimization technology play an important role for manufacturing enterprises to improve production efficiency, reduce production costs and many other aspects. Existing studies have shown that improved genetic algorithm has solved the limitations that existed in the genetic algorithm, the objective function is able to meet customers' needs for shop scheduling, and the future research should focus on the combination of genetic algorithm with other optimized algorithms. In this paper, in order to overcome the shortcomings of early convergence of genetic algorithm and resolve local minimization problem in search process,aiming at mixed flow shop scheduling problem, an improved cyclic search genetic algorithm is put forward, and chromosome coding method and corresponding operation are given.The operation has the nature of inheriting the optimal individual ofthe previous generation and is able to avoid the emergence of local minimum, and cyclic and crossover operation and mutation operation can enhance the diversity of the population and then quickly get the optimal individual, and the effectiveness of the algorithm is validated. Experimental results show that the improved algorithm can well avoid the emergency of local minimum and is rapid in convergence.

  2. Nuclear reactors project optimization based on neural network and genetic algorithm

    International Nuclear Information System (INIS)

    Pereira, Claudio M.N.A.; Schirru, Roberto; Martinez, Aquilino S.

    1997-01-01

    This work presents a prototype of a system for nuclear reactor core design optimization based on genetic algorithms and artificial neural networks. A neural network is modeled and trained in order to predict the flux and the neutron multiplication factor values based in the enrichment, network pitch and cladding thickness, with average error less than 2%. The values predicted by the neural network are used by a genetic algorithm in this heuristic search, guided by an objective function that rewards the high flux values and penalizes multiplication factors far from the required value. Associating the quick prediction - that may substitute the reactor physics calculation code - with the global optimization capacity of the genetic algorithm, it was obtained a quick and effective system for nuclear reactor core design optimization. (author). 11 refs., 8 figs., 3 tabs

  3. The Algorithm of Link Prediction on Social Network

    Directory of Open Access Journals (Sweden)

    Liyan Dong

    2013-01-01

    Full Text Available At present, most link prediction algorithms are based on the similarity between two entities. Social network topology information is one of the main sources to design the similarity function between entities. But the existing link prediction algorithms do not apply the network topology information sufficiently. For lack of traditional link prediction algorithms, we propose two improved algorithms: CNGF algorithm based on local information and KatzGF algorithm based on global information network. For the defect of the stationary of social network, we also provide the link prediction algorithm based on nodes multiple attributes information. Finally, we verified these algorithms on DBLP data set, and the experimental results show that the performance of the improved algorithm is superior to that of the traditional link prediction algorithm.

  4. Robust reactor power control system design by genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Yoon Joon; Cho, Kyung Ho; Kim, Sin [Cheju National University, Cheju (Korea, Republic of)

    1997-12-31

    The H{sub {infinity}} robust controller for the reactor power control system is designed by use of the mixed weight sensitivity. The system is configured into the typical two-port model with which the weight functions are augmented. Since the solution depends on the weighting functions and the problem is of nonconvex, the genetic algorithm is used to determine the weighting functions. The cost function applied in the genetic algorithm permits the direct control of the power tracking performances. In addition, the actual operating constraints such as rod velocity and acceleration can be treated as design parameters. Compared with the conventional approach, the controller designed by the genetic algorithm results in the better performances with the realistic constraints. Also, it is found that the genetic algorithm could be used as an effective tool in the robust design. 4 refs., 6 figs. (Author)

  5. Robust reactor power control system design by genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Yoon Joon; Cho, Kyung Ho; Kim, Sin [Cheju National University, Cheju (Korea, Republic of)

    1998-12-31

    The H{sub {infinity}} robust controller for the reactor power control system is designed by use of the mixed weight sensitivity. The system is configured into the typical two-port model with which the weight functions are augmented. Since the solution depends on the weighting functions and the problem is of nonconvex, the genetic algorithm is used to determine the weighting functions. The cost function applied in the genetic algorithm permits the direct control of the power tracking performances. In addition, the actual operating constraints such as rod velocity and acceleration can be treated as design parameters. Compared with the conventional approach, the controller designed by the genetic algorithm results in the better performances with the realistic constraints. Also, it is found that the genetic algorithm could be used as an effective tool in the robust design. 4 refs., 6 figs. (Author)

  6. Genetic Algorithms Evolve Optimized Transforms for Signal Processing Applications

    National Research Council Canada - National Science Library

    Moore, Frank; Babb, Brendan; Becke, Steven; Koyuk, Heather; Lamson, Earl, III; Wedge, Christopher

    2005-01-01

    .... The primary goal of the research described in this final report was to establish a methodology for using genetic algorithms to evolve coefficient sets describing inverse transforms and matched...

  7. Use of genetic algorithms for high hydrostatic pressure inactivation ...

    African Journals Online (AJOL)

    ) for high hydrostatic pressure (HHP) inactivation of Bacillus cereus spores, Bacillus subtilis spores and cells, Staphylococcus aureus and Listeria monocytogenes, all in milk buffer, were used to demonstrate the utility of genetic algorithms ...

  8. Mission Planning for Unmanned Aircraft with Genetic Algorithms

    DEFF Research Database (Denmark)

    Hansen, Karl Damkjær

    unmanned aircraft are used for aerial surveying of the crops. The farmer takes the role of the analyst above, who does not necessarily have any specific interest in remote controlled aircraft but needs the outcome of the survey. The recurring method in the study is the genetic algorithm; a flexible...... contributions are made in the area of the genetic algorithms. One is a method to decide on the right time to stop the computation of the plan, when the right balance is stricken between using the time planning and using the time flying. The other contribution is a characterization of the evolutionary operators...... used in the genetic algorithm. The result is a measure based on entropy to evaluate and control the diversity of the population of the genetic algorithm, which is an important factor its effectiveness....

  9. PM Synchronous Motor Dynamic Modeling with Genetic Algorithm ...

    African Journals Online (AJOL)

    Adel

    This paper proposes dynamic modeling simulation for ac Surface Permanent Magnet Synchronous ... Simulations are implemented using MATLAB with its genetic algorithm toolbox. .... selection, the process that drives biological evolution.

  10. Design Optimization of Space Launch Vehicles Using a Genetic Algorithm

    National Research Council Canada - National Science Library

    Bayley, Douglas J

    2007-01-01

    .... A genetic algorithm (GA) was employed to optimize the design of the space launch vehicle. A cost model was incorporated into the optimization process with the goal of minimizing the overall vehicle cost...

  11. Cloud Computing Task Scheduling Based on Cultural Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Li Jian-Wen

    2016-01-01

    Full Text Available The task scheduling strategy based on cultural genetic algorithm(CGA is proposed in order to improve the efficiency of task scheduling in the cloud computing platform, which targets at minimizing the total time and cost of task scheduling. The improved genetic algorithm is used to construct the main population space and knowledge space under cultural framework which get independent parallel evolution, forming a mechanism of mutual promotion to dispatch the cloud task. Simultaneously, in order to prevent the defects of the genetic algorithm which is easy to fall into local optimum, the non-uniform mutation operator is introduced to improve the search performance of the algorithm. The experimental results show that CGA reduces the total time and lowers the cost of the scheduling, which is an effective algorithm for the cloud task scheduling.

  12. Machine Learning in Production Systems Design Using Genetic Algorithms

    OpenAIRE

    Abu Qudeiri Jaber; Yamamoto Hidehiko Rizauddin Ramli

    2008-01-01

    To create a solution for a specific problem in machine learning, the solution is constructed from the data or by use a search method. Genetic algorithms are a model of machine learning that can be used to find nearest optimal solution. While the great advantage of genetic algorithms is the fact that they find a solution through evolution, this is also the biggest disadvantage. Evolution is inductive, in nature life does not evolve towards a good solution but it evolves aw...

  13. Nonlinear model predictive control theory and algorithms

    CERN Document Server

    Grüne, Lars

    2017-01-01

    This book offers readers a thorough and rigorous introduction to nonlinear model predictive control (NMPC) for discrete-time and sampled-data systems. NMPC schemes with and without stabilizing terminal constraints are detailed, and intuitive examples illustrate the performance of different NMPC variants. NMPC is interpreted as an approximation of infinite-horizon optimal control so that important properties like closed-loop stability, inverse optimality and suboptimality can be derived in a uniform manner. These results are complemented by discussions of feasibility and robustness. An introduction to nonlinear optimal control algorithms yields essential insights into how the nonlinear optimization routine—the core of any nonlinear model predictive controller—works. Accompanying software in MATLAB® and C++ (downloadable from extras.springer.com/), together with an explanatory appendix in the book itself, enables readers to perform computer experiments exploring the possibilities and limitations of NMPC. T...

  14. Genetic Algorithm Optimized Neural Networks Ensemble as ...

    African Journals Online (AJOL)

    Marquardt algorithm by varying conditions such as inputs, hidden neurons, initialization, training sets and random Gaussian noise injection to ... Several such ensembles formed the population which was evolved to generate the fittest ensemble.

  15. Fuzzy Information Retrieval Using Genetic Algorithms and Relevance Feedback.

    Science.gov (United States)

    Petry, Frederick E.; And Others

    1993-01-01

    Describes an approach that combines concepts from information retrieval, fuzzy set theory, and genetic programing to improve weighted Boolean query formulation via relevance feedback. Highlights include background on information retrieval systems; genetic algorithms; subproblem formulation; and preliminary results based on a testbed. (Contains 12…

  16. Application of Hybrid Genetic Algorithm Routine in Optimizing Food and Bioengineering Processes

    Directory of Open Access Journals (Sweden)

    Jaya Shankar Tumuluru

    2016-11-01

    Full Text Available Optimization is a crucial step in the analysis of experimental results. Deterministic methods only converge on local optimums and require exponentially more time as dimensionality increases. Stochastic algorithms are capable of efficiently searching the domain space; however convergence is not guaranteed. This article demonstrates the novelty of the hybrid genetic algorithm (HGA, which combines both stochastic and deterministic routines for improved optimization results. The new hybrid genetic algorithm developed is applied to the Ackley benchmark function as well as case studies in food, biofuel, and biotechnology processes. For each case study, the hybrid genetic algorithm found a better optimum candidate than reported by the sources. In the case of food processing, the hybrid genetic algorithm improved the anthocyanin yield by 6.44%. Optimization of bio-oil production using HGA resulted in a 5.06% higher yield. In the enzyme production process, HGA predicted a 0.39% higher xylanase yield. Hybridization of the genetic algorithm with a deterministic algorithm resulted in an improved optimum compared to statistical methods.

  17. Evolving aerodynamic airfoils for wind turbines through a genetic algorithm

    Science.gov (United States)

    Hernández, J. J.; Gómez, E.; Grageda, J. I.; Couder, C.; Solís, A.; Hanotel, C. L.; Ledesma, JI

    2017-01-01

    Nowadays, genetic algorithms stand out for airfoil optimisation, due to the virtues of mutation and crossing-over techniques. In this work we propose a genetic algorithm with arithmetic crossover rules. The optimisation criteria are taken to be the maximisation of both aerodynamic efficiency and lift coefficient, while minimising drag coefficient. Such algorithm shows greatly improvements in computational costs, as well as a high performance by obtaining optimised airfoils for Mexico City's specific wind conditions from generic wind turbines designed for higher Reynolds numbers, in few iterations.

  18. Reactor controller design using genetic algorithms with simulated annealing

    International Nuclear Information System (INIS)

    Erkan, K.; Buetuen, E.

    2000-01-01

    This chapter presents a digital control system for ITU TRIGA Mark-II reactor using genetic algorithms with simulated annealing. The basic principles of genetic algorithms for problem solving are inspired by the mechanism of natural selection. Natural selection is a biological process in which stronger individuals are likely to be winners in a competing environment. Genetic algorithms use a direct analogy of natural evolution. Genetic algorithms are global search techniques for optimisation but they are poor at hill-climbing. Simulated annealing has the ability of probabilistic hill-climbing. Thus, the two techniques are combined here to get a fine-tuned algorithm that yields a faster convergence and a more accurate search by introducing a new mutation operator like simulated annealing or an adaptive cooling schedule. In control system design, there are currently no systematic approaches to choose the controller parameters to obtain the desired performance. The controller parameters are usually determined by test and error with simulation and experimental analysis. Genetic algorithm is used automatically and efficiently searching for a set of controller parameters for better performance. (orig.)

  19. A Hybrid Genetic Algorithm Approach for Optimal Power Flow

    Directory of Open Access Journals (Sweden)

    Sydulu Maheswarapu

    2011-08-01

    Full Text Available This paper puts forward a reformed hybrid genetic algorithm (GA based approach to the optimal power flow. In the approach followed here, continuous variables are designed using real-coded GA and discrete variables are processed as binary strings. The outcomes are compared with many other methods like simple genetic algorithm (GA, adaptive genetic algorithm (AGA, differential evolution (DE, particle swarm optimization (PSO and music based harmony search (MBHS on a IEEE30 bus test bed, with a total load of 283.4 MW. Its found that the proposed algorithm is found to offer lowest fuel cost. The proposed method is found to be computationally faster, robust, superior and promising form its convergence characteristics.

  20. A Genetic Algorithms Based Approach for Identification of Escherichia coli Fed-batch Fermentation

    Directory of Open Access Journals (Sweden)

    Olympia Roeva

    2004-10-01

    Full Text Available This paper presents the use of genetic algorithms for identification of Escherichia coli fed-batch fermentation process. Genetic algorithms are a directed random search technique, based on the mechanics of natural selection and natural genetics, which can find the global optimal solution in complex multidimensional search space. The dynamic behavior of considered process has known nonlinear structure, described with a system of deterministic nonlinear differential equations according to the mass balance. The parameters of the model are estimated using genetic algorithms. Simulation examples for demonstration of the effectiveness and robustness of the proposed identification scheme are included. As a result, the model accurately predicts the process of cultivation of E. coli.

  1. Dynamic Uniform Scaling for Multiobjective Genetic Algorithms

    DEFF Research Database (Denmark)

    Pedersen, Gerulf; Goldberg, David E.

    2004-01-01

    Before Multiobjective Evolutionary Algorithms (MOEAs) can be used as a widespread tool for solving arbitrary real world problems there are some salient issues which require further investigation. One of these issues is how a uniform distribution of solutions along the Pareto non-dominated front c...

  2. Dynamic Uniform Scaling for Multiobjective Genetic Algorithms

    DEFF Research Database (Denmark)

    Pedersen, Gerulf; Goldberg, D.E.

    2004-01-01

    Before Multiobjective Evolutionary Algorithms (MOEAs) can be used as a widespread tool for solving arbitrary real world problems there are some salient issues which require further investigation. One of these issues is how a uniform distribution of solutions along the Pareto non-dominated front can...

  3. Support Vector Regression and Genetic Algorithm for HVAC Optimal Operation

    Directory of Open Access Journals (Sweden)

    Ching-Wei Chen

    2016-01-01

    Full Text Available This study covers records of various parameters affecting the power consumption of air-conditioning systems. Using the Support Vector Machine (SVM, the chiller power consumption model, secondary chilled water pump power consumption model, air handling unit fan power consumption model, and air handling unit load model were established. In addition, it was found that R2 of the models all reached 0.998, and the training time was far shorter than that of the neural network. Through genetic programming, a combination of operating parameters with the least power consumption of air conditioning operation was searched. Moreover, the air handling unit load in line with the air conditioning cooling load was predicted. The experimental results show that for the combination of operating parameters with the least power consumption in line with the cooling load obtained through genetic algorithm search, the power consumption of the air conditioning systems under said combination of operating parameters was reduced by 22% compared to the fixed operating parameters, thus indicating significant energy efficiency.

  4. Quantum algorithms and the genetic code

    Indian Academy of Sciences (India)

    the process of replication. One generation of organisms produces the next generation, which is essentially a copy of itself. The self-similarity is maintained by the hereditary information—the genetic code—that is passed on from one generation to the next. The long chains of DNA molecules residing in the nuclei of the cells ...

  5. An Enhanced Genetic Algorithm for the Generalized Traveling Salesman Problem

    Directory of Open Access Journals (Sweden)

    H. Jafarzadeh

    2017-12-01

    Full Text Available The generalized traveling salesman problem (GTSP deals with finding the minimum-cost tour in a clustered set of cities. In this problem, the traveler is interested in finding the best path that goes through all clusters. As this problem is NP-hard, implementing a metaheuristic algorithm to solve the large scale problems is inevitable. The performance of these algorithms can be intensively promoted by other heuristic algorithms. In this study, a search method is developed that improves the quality of the solutions and competition time considerably in comparison with Genetic Algorithm. In the proposed algorithm, the genetic algorithms with the Nearest Neighbor Search (NNS are combined and a heuristic mutation operator is applied. According to the experimental results on a set of standard test problems with symmetric distances, the proposed algorithm finds the best solutions in most cases with the least computational time. The proposed algorithm is highly competitive with the published until now algorithms in both solution quality and running time.

  6. Evacuation route planning during nuclear emergency using genetic algorithm

    International Nuclear Information System (INIS)

    Suman, Vitisha; Sarkar, P.K.

    2012-01-01

    In nuclear industry the routing in case of any emergency is a cause of concern and of great importance. Even the smallest of time saved in the affected region saves a huge amount of otherwise received dose. Genetic algorithm an optimization technique has great ability to search for the optimal path from the affected region to a destination station in a spatially addressed problem. Usually heuristic algorithms are used to carry out these types of search strategy, but due to the lack of global sampling in the feasible solution space, these algorithms have considerable possibility of being trapped into local optima. Routing problems mainly are search problems for finding the shortest distance within a time limit to cover the required number of stations taking care of the traffics, road quality, population size etc. Lack of any formal mechanisms to help decision-makers explore the solution space of their problem and thereby challenges their assumptions about the number and range of options available. The Genetic Algorithm provides a way to optimize a multi-parameter constrained problem with an ease. Here use of Genetic Algorithm to generate a range of options available and to search a solution space and selectively focus on promising combinations of criteria makes them ideally suited to such complex spatial decision problems. The emergency response and routing can be made efficient, in accessing the closest facilities and determining the shortest route using genetic algorithm. The accuracy and care in creating database can be used to improve the result of the final output. The Genetic algorithm can be used to improve the accuracy of result on the basis of distance where other algorithm cannot be obtained. The search space can be utilized to its great extend

  7. Pose estimation for augmented reality applications using genetic algorithm.

    Science.gov (United States)

    Yu, Ying Kin; Wong, Kin Hong; Chang, Michael Ming Yuen

    2005-12-01

    This paper describes a genetic algorithm that tackles the pose-estimation problem in computer vision. Our genetic algorithm can find the rotation and translation of an object accurately when the three-dimensional structure of the object is given. In our implementation, each chromosome encodes both the pose and the indexes to the selected point features of the object. Instead of only searching for the pose as in the existing work, our algorithm, at the same time, searches for a set containing the most reliable feature points in the process. This mismatch filtering strategy successfully makes the algorithm more robust under the presence of point mismatches and outliers in the images. Our algorithm has been tested with both synthetic and real data with good results. The accuracy of the recovered pose is compared to the existing algorithms. Our approach outperformed the Lowe's method and the other two genetic algorithms under the presence of point mismatches and outliers. In addition, it has been used to estimate the pose of a real object. It is shown that the proposed method is applicable to augmented reality applications.

  8. Genetic Bee Colony (GBC) algorithm: A new gene selection method for microarray cancer classification.

    Science.gov (United States)

    Alshamlan, Hala M; Badr, Ghada H; Alohali, Yousef A

    2015-06-01

    Naturally inspired evolutionary algorithms prove effectiveness when used for solving feature selection and classification problems. Artificial Bee Colony (ABC) is a relatively new swarm intelligence method. In this paper, we propose a new hybrid gene selection method, namely Genetic Bee Colony (GBC) algorithm. The proposed algorithm combines the used of a Genetic Algorithm (GA) along with Artificial Bee Colony (ABC) algorithm. The goal is to integrate the advantages of both algorithms. The proposed algorithm is applied to a microarray gene expression profile in order to select the most predictive and informative genes for cancer classification. In order to test the accuracy performance of the proposed algorithm, extensive experiments were conducted. Three binary microarray datasets are use, which include: colon, leukemia, and lung. In addition, another three multi-class microarray datasets are used, which are: SRBCT, lymphoma, and leukemia. Results of the GBC algorithm are compared with our recently proposed technique: mRMR when combined with the Artificial Bee Colony algorithm (mRMR-ABC). We also compared the combination of mRMR with GA (mRMR-GA) and Particle Swarm Optimization (mRMR-PSO) algorithms. In addition, we compared the GBC algorithm with other related algorithms that have been recently published in the literature, using all benchmark datasets. The GBC algorithm shows superior performance as it achieved the highest classification accuracy along with the lowest average number of selected genes. This proves that the GBC algorithm is a promising approach for solving the gene selection problem in both binary and multi-class cancer classification. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Exchange inlet optimization by genetic algorithm for improved RBCC performance

    Science.gov (United States)

    Chorkawy, G.; Etele, J.

    2017-09-01

    A genetic algorithm based on real parameter representation using a variable selection pressure and variable probability of mutation is used to optimize an annular air breathing rocket inlet called the Exchange Inlet. A rapid and accurate design method which provides estimates for air breathing, mixing, and isentropic flow performance is used as the engine of the optimization routine. Comparison to detailed numerical simulations show that the design method yields desired exit Mach numbers to within approximately 1% over 75% of the annular exit area and predicts entrained air massflows to between 1% and 9% of numerically simulated values depending on the flight condition. Optimum designs are shown to be obtained within approximately 8000 fitness function evaluations in a search space on the order of 106. The method is also shown to be able to identify beneficial values for particular alleles when they exist while showing the ability to handle cases where physical and aphysical designs co-exist at particular values of a subset of alleles within a gene. For an air breathing engine based on a hydrogen fuelled rocket an exchange inlet is designed which yields a predicted air entrainment ratio within 95% of the theoretical maximum.

  10. Genetic algorithm approach to thin film optical parameters determination

    International Nuclear Information System (INIS)

    Jurecka, S.; Jureckova, M.; Muellerova, J.

    2003-01-01

    Optical parameters of thin film are important for several optical and optoelectronic applications. In this work the genetic algorithm proposed to solve optical parameters of thin film values. The experimental reflectance is modelled by the Forouhi - Bloomer dispersion relations. The refractive index, the extinction coefficient and the film thickness are the unknown parameters in this model. Genetic algorithm use probabilistic examination of promissing areas of the parameter space. It creates a population of solutions based on the reflectance model and then operates on the population to evolve the best solution by using selection, crossover and mutation operators on the population individuals. The implementation of genetic algorithm method and the experimental results are described too (Authors)

  11. Wind power prediction based on genetic neural network

    Science.gov (United States)

    Zhang, Suhan

    2017-04-01

    The scale of grid connected wind farms keeps increasing. To ensure the stability of power system operation, make a reasonable scheduling scheme and improve the competitiveness of wind farm in the electricity generation market, it's important to accurately forecast the short-term wind power. To reduce the influence of the nonlinear relationship between the disturbance factor and the wind power, the improved prediction model based on genetic algorithm and neural network method is established. To overcome the shortcomings of long training time of BP neural network and easy to fall into local minimum and improve the accuracy of the neural network, genetic algorithm is adopted to optimize the parameters and topology of neural network. The historical data is used as input to predict short-term wind power. The effectiveness and feasibility of the method is verified by the actual data of a certain wind farm as an example.

  12. Public Transport Route Finding using a Hybrid Genetic Algorithm

    OpenAIRE

    Liviu Adrian COTFAS; Andreea DIOSTEANU

    2011-01-01

    In this paper we present a public transport route finding solution based on a hybrid genetic algorithm. The algorithm uses two heuristics that take into consideration the number of trans-fers and the remaining distance to the destination station in order to improve the convergence speed. The interface of the system uses the latest web technologies to offer both portability and advanced functionality. The approach has been evaluated using the data for the Bucharest public transport network.

  13. Public Transport Route Finding using a Hybrid Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Liviu Adrian COTFAS

    2011-01-01

    Full Text Available In this paper we present a public transport route finding solution based on a hybrid genetic algorithm. The algorithm uses two heuristics that take into consideration the number of trans-fers and the remaining distance to the destination station in order to improve the convergence speed. The interface of the system uses the latest web technologies to offer both portability and advanced functionality. The approach has been evaluated using the data for the Bucharest public transport network.

  14. Algorithmic Trading with Developmental and Linear Genetic Programming

    Science.gov (United States)

    Wilson, Garnett; Banzhaf, Wolfgang

    A developmental co-evolutionary genetic programming approach (PAM DGP) and a standard linear genetic programming (LGP) stock trading systemare applied to a number of stocks across market sectors. Both GP techniques were found to be robust to market fluctuations and reactive to opportunities associated with stock price rise and fall, with PAMDGP generating notably greater profit in some stock trend scenarios. Both algorithms were very accurate at buying to achieve profit and selling to protect assets, while exhibiting bothmoderate trading activity and the ability to maximize or minimize investment as appropriate. The content of the trading rules produced by both algorithms are also examined in relation to stock price trend scenarios.

  15. Application of genetic algorithm in radio ecological models parameter determination

    Energy Technology Data Exchange (ETDEWEB)

    Pantelic, G. [Institute of Occupatioanl Health and Radiological Protection ' Dr Dragomir Karajovic' , Belgrade (Serbia)

    2006-07-01

    The method of genetic algorithms was used to determine the biological half-life of 137 Cs in cow milk after the accident in Chernobyl. Methodologically genetic algorithms are based on the fact that natural processes tend to optimize themselves and therefore this method should be more efficient in providing optimal solutions in the modeling of radio ecological and environmental events. The calculated biological half-life of 137 Cs in milk is (32 {+-} 3) days and transfer coefficient from grass to milk is (0.019 {+-} 0.005). (authors)

  16. Time-Delay System Identification Using Genetic Algorithm

    DEFF Research Database (Denmark)

    Yang, Zhenyu; Seested, Glen Thane

    2013-01-01

    Due to the unknown dead-time coefficient, the time-delay system identification turns to be a non-convex optimization problem. This paper investigates the identification of a simple time-delay system, named First-Order-Plus-Dead-Time (FOPDT), by using the Genetic Algorithm (GA) technique. The qual......Due to the unknown dead-time coefficient, the time-delay system identification turns to be a non-convex optimization problem. This paper investigates the identification of a simple time-delay system, named First-Order-Plus-Dead-Time (FOPDT), by using the Genetic Algorithm (GA) technique...

  17. Applying genetic algorithms for programming manufactoring cell tasks

    Directory of Open Access Journals (Sweden)

    Efredy Delgado

    2005-05-01

    Full Text Available This work was aimed for developing computational intelligence for scheduling a manufacturing cell's tasks, based manily on genetic algorithms. The manufacturing cell was modelled as beign a production-line; the makespan was calculated by using heuristics adapted from several libraries for genetic algorithms computed in C++ builder. Several problems dealing with small, medium and large list of jobs and machinery were resolved. The results were compared with other heuristics. The approach developed here would seem to be promising for future research concerning scheduling manufacturing cell tasks involving mixed batches.

  18. Optimization of multicast optical networks with genetic algorithm

    Science.gov (United States)

    Lv, Bo; Mao, Xiangqiao; Zhang, Feng; Qin, Xi; Lu, Dan; Chen, Ming; Chen, Yong; Cao, Jihong; Jian, Shuisheng

    2007-11-01

    In this letter, aiming to obtain the best multicast performance of optical network in which the video conference information is carried by specified wavelength, we extend the solutions of matrix games with the network coding theory and devise a new method to solve the complex problems of multicast network switching. In addition, an experimental optical network has been testified with best switching strategies by employing the novel numerical solution designed with an effective way of genetic algorithm. The result shows that optimal solutions with genetic algorithm are accordance with the ones with the traditional fictitious play method.

  19. Application of genetic algorithm in radio ecological models parameter determination

    International Nuclear Information System (INIS)

    Pantelic, G.

    2006-01-01

    The method of genetic algorithms was used to determine the biological half-life of 137 Cs in cow milk after the accident in Chernobyl. Methodologically genetic algorithms are based on the fact that natural processes tend to optimize themselves and therefore this method should be more efficient in providing optimal solutions in the modeling of radio ecological and environmental events. The calculated biological half-life of 137 Cs in milk is (32 ± 3) days and transfer coefficient from grass to milk is (0.019 ± 0.005). (authors)

  20. Naturally selecting solutions: the use of genetic algorithms in bioinformatics.

    Science.gov (United States)

    Manning, Timmy; Sleator, Roy D; Walsh, Paul

    2013-01-01

    For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.

  1. Particle swarm optimization - Genetic algorithm (PSOGA) on linear transportation problem

    Science.gov (United States)

    Rahmalia, Dinita

    2017-08-01

    Linear Transportation Problem (LTP) is the case of constrained optimization where we want to minimize cost subject to the balance of the number of supply and the number of demand. The exact method such as northwest corner, vogel, russel, minimal cost have been applied at approaching optimal solution. In this paper, we use heurisitic like Particle Swarm Optimization (PSO) for solving linear transportation problem at any size of decision variable. In addition, we combine mutation operator of Genetic Algorithm (GA) at PSO to improve optimal solution. This method is called Particle Swarm Optimization - Genetic Algorithm (PSOGA). The simulations show that PSOGA can improve optimal solution resulted by PSO.

  2. Air data system optimization using a genetic algorithm

    Science.gov (United States)

    Deshpande, Samir M.; Kumar, Renjith R.; Seywald, Hans; Siemers, Paul M., III

    1992-01-01

    An optimization method for flush-orifice air data system design has been developed using the Genetic Algorithm approach. The optimization of the orifice array minimizes the effect of normally distributed random noise in the pressure readings on the calculation of air data parameters, namely, angle of attack, sideslip angle and freestream dynamic pressure. The optimization method is applied to the design of Pressure Distribution/Air Data System experiment (PD/ADS) proposed for inclusion in the Aeroassist Flight Experiment (AFE). Results obtained by the Genetic Algorithm method are compared to the results obtained by conventional gradient search method.

  3. Parameter determination for quantitative PIXE analysis using genetic algorithms

    International Nuclear Information System (INIS)

    Aspiazu, J.; Belmont-Moreno, E.

    1996-01-01

    For biological and environmental samples, PIXE technique is in particular advantage for elemental analysis, but the quantitative analysis implies accomplishing complex calculations that require the knowledge of more than a dozen parameters. Using a genetic algorithm, the authors give here an account of the procedure to obtain the best values for the parameters necessary to fit the efficiency for a X-ray detector. The values for some variables involved in quantitative PIXE analysis, were manipulated in a similar way as the genetic information is treated in a biological process. The authors carried out the algorithm until they reproduce, within the confidence interval, the elemental concentrations corresponding to a reference material

  4. Stochastic search in structural optimization - Genetic algorithms and simulated annealing

    Science.gov (United States)

    Hajela, Prabhat

    1993-01-01

    An account is given of illustrative applications of genetic algorithms and simulated annealing methods in structural optimization. The advantages of such stochastic search methods over traditional mathematical programming strategies are emphasized; it is noted that these methods offer a significantly higher probability of locating the global optimum in a multimodal design space. Both genetic-search and simulated annealing can be effectively used in problems with a mix of continuous, discrete, and integer design variables.

  5. Parallel Genetic Algorithms for calibrating Cellular Automata models: Application to lava flows

    International Nuclear Information System (INIS)

    D'Ambrosio, D.; Spataro, W.; Di Gregorio, S.; Calabria Univ., Cosenza; Crisci, G.M.; Rongo, R.; Calabria Univ., Cosenza

    2005-01-01

    Cellular Automata are highly nonlinear dynamical systems which are suitable far simulating natural phenomena whose behaviour may be specified in terms of local interactions. The Cellular Automata model SCIARA, developed far the simulation of lava flows, demonstrated to be able to reproduce the behaviour of Etnean events. However, in order to apply the model far the prediction of future scenarios, a thorough calibrating phase is required. This work presents the application of Genetic Algorithms, general-purpose search algorithms inspired to natural selection and genetics, far the parameters optimisation of the model SCIARA. Difficulties due to the elevated computational time suggested the adoption a Master-Slave Parallel Genetic Algorithm far the calibration of the model with respect to the 2001 Mt. Etna eruption. Results demonstrated the usefulness of the approach, both in terms of computing time and quality of performed simulations

  6. Application of Shuffled Frog Leaping Algorithm and Genetic Algorithm for the Optimization of Urban Stormwater Drainage

    Science.gov (United States)

    Kumar, S.; Kaushal, D. R.; Gosain, A. K.

    2017-12-01

    Urban hydrology will have an increasing role to play in the sustainability of human settlements. Expansion of urban areas brings significant changes in physical characteristics of landuse. Problems with administration of urban flooding have their roots in concentration of population within a relatively small area. As watersheds are urbanized, infiltration decreases, pattern of surface runoff is changed generating high peak flows, large runoff volumes from urban areas. Conceptual rainfall-runoff models have become a foremost tool for predicting surface runoff and flood forecasting. Manual calibration is often time consuming and tedious because of the involved subjectivity, which makes automatic approach more preferable. The calibration of parameters usually includes numerous criteria for evaluating the performances with respect to the observed data. Moreover, derivation of objective function assosciat6ed with the calibration of model parameters is quite challenging. Various studies dealing with optimization methods has steered the embracement of evolution based optimization algorithms. In this paper, a systematic comparison of two evolutionary approaches to multi-objective optimization namely shuffled frog leaping algorithm (SFLA) and genetic algorithms (GA) is done. SFLA is a cooperative search metaphor, stimulated by natural memetics based on the population while, GA is based on principle of survival of the fittest and natural evolution. SFLA and GA has been employed for optimizing the major parameters i.e. width, imperviousness, Manning's coefficient and depression storage for the highly urbanized catchment of Delhi, India. The study summarizes the auto-tuning of a widely used storm water management model (SWMM), by internal coupling of SWMM with SFLA and GA separately. The values of statistical parameters such as, Nash-Sutcliffe efficiency (NSE) and Percent Bias (PBIAS) were found to lie within the acceptable limit, indicating reasonably good model performance

  7. Genetic algorithm for chromaticity correction in diffraction limited storage rings

    Directory of Open Access Journals (Sweden)

    M. P. Ehrlichman

    2016-04-01

    Full Text Available A multiobjective genetic algorithm is developed for optimizing nonlinearities in diffraction limited storage rings. This algorithm determines sextupole and octupole strengths for chromaticity correction that deliver optimized dynamic aperture and beam lifetime. The algorithm makes use of dominance constraints to breed desirable properties into the early generations. The momentum aperture is optimized indirectly by constraining the chromatic tune footprint and optimizing the off-energy dynamic aperture. The result is an effective and computationally efficient technique for correcting chromaticity in a storage ring while maintaining optimal dynamic aperture and beam lifetime.

  8. A Genetic Algorithm on Inventory Routing Problem

    Directory of Open Access Journals (Sweden)

    Nevin Aydın

    2014-03-01

    Full Text Available Inventory routing problem can be defined as forming the routes to serve to the retailers from the manufacturer, deciding on the quantity of the shipment to the retailers and deciding on the timing of the replenishments. The difference of inventory routing problems from vehicle routing problems is the consideration of the inventory positions of retailers and supplier, and making the decision accordingly. Inventory routing problems are complex in nature and they can be solved either theoretically or using a heuristics method. Metaheuristics is an emerging class of heuristics that can be applied to combinatorial optimization problems. In this paper, we provide the relationship between vendor-managed inventory and inventory routing problem. The proposed genetic for solving vehicle routing problem is described in detail.

  9. Experimental Performance of a Genetic Algorithm for Airborne Strategic Conflict Resolution

    Science.gov (United States)

    Karr, David A.; Vivona, Robert A.; Roscoe, David A.; DePascale, Stephen M.; Consiglio, Maria

    2009-01-01

    The Autonomous Operations Planner, a research prototype flight-deck decision support tool to enable airborne self-separation, uses a pattern-based genetic algorithm to resolve predicted conflicts between the ownship and traffic aircraft. Conflicts are resolved by modifying the active route within the ownship's flight management system according to a predefined set of maneuver pattern templates. The performance of this pattern-based genetic algorithm was evaluated in the context of batch-mode Monte Carlo simulations running over 3600 flight hours of autonomous aircraft in en-route airspace under conditions ranging from typical current traffic densities to several times that level. Encountering over 8900 conflicts during two simulation experiments, the genetic algorithm was able to resolve all but three conflicts, while maintaining a required time of arrival constraint for most aircraft. Actual elapsed running time for the algorithm was consistent with conflict resolution in real time. The paper presents details of the genetic algorithm's design, along with mathematical models of the algorithm's performance and observations regarding the effectiveness of using complimentary maneuver patterns when multiple resolutions by the same aircraft were required.

  10. Parameters Calculation of ZnO Surge Arrester Models by Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    A. Bayadi

    2006-09-01

    Full Text Available This paper proposes to provide a new technique based on the genetic algorithm to obtain the best possible series of values of the parameters of the ZnO surge arresters models. The validity of the predicted parameters is then checked by comparing the results predicted with the experimental results available in the literature. Using the ATP-EMTP package an application of the arrester model on network system studies is presented and discussed.

  11. An Adaptive Filtering Algorithm Based on Genetic Algorithm-Backpropagation Network

    Directory of Open Access Journals (Sweden)

    Kai Hu

    2013-01-01

    Full Text Available A new image filtering algorithm is proposed. GA-BPN algorithm uses genetic algorithm (GA to decide weights in a back propagation neural network (BPN. It has better global optimal characteristics than traditional optimal algorithm. In this paper, we used GA-BPN to do image noise filter researching work. Firstly, this paper uses training samples to train GA-BPN as the noise detector. Then, we utilize the well-trained GA-BPN to recognize noise pixels in target image. And at last, an adaptive weighted average algorithm is used to recover noise pixels recognized by GA-BPN. Experiment data shows that this algorithm has better performance than other filters.

  12. A novel structure-aware sparse learning algorithm for brain imaging genetics.

    Science.gov (United States)

    Du, Lei; Jingwen, Yan; Kim, Sungeun; Risacher, Shannon L; Huang, Heng; Inlow, Mark; Moore, Jason H; Saykin, Andrew J; Shen, Li

    2014-01-01

    Brain imaging genetics is an emergent research field where the association between genetic variations such as single nucleotide polymorphisms (SNPs) and neuroimaging quantitative traits (QTs) is evaluated. Sparse canonical correlation analysis (SCCA) is a bi-multivariate analysis method that has the potential to reveal complex multi-SNP-multi-QT associations. Most existing SCCA algorithms are designed using the soft threshold strategy, which assumes that the features in the data are independent from each other. This independence assumption usually does not hold in imaging genetic data, and thus inevitably limits the capability of yielding optimal solutions. We propose a novel structure-aware SCCA (denoted as S2CCA) algorithm to not only eliminate the independence assumption for the input data, but also incorporate group-like structure in the model. Empirical comparison with a widely used SCCA implementation, on both simulated and real imaging genetic data, demonstrated that S2CCA could yield improved prediction performance and biologically meaningful findings.

  13. The multi-niche crowding genetic algorithm: Analysis and applications

    Energy Technology Data Exchange (ETDEWEB)

    Cedeno, Walter [Univ. of California, Davis, CA (United States)

    1995-09-01

    The ability of organisms to evolve and adapt to the environment has provided mother nature with a rich and diverse set of species. Only organisms well adapted to their environment can survive from one generation to the next, transferring on the traits, that made them successful, to their offspring. Competition for resources and the ever changing environment drives some species to extinction and at the same time others evolve to maintain the delicate balance in nature. In this disertation we present the multi-niche crowding genetic algorithm, a computational metaphor to the survival of species in ecological niches in the face of competition. The multi-niche crowding genetic algorithm maintains stable subpopulations of solutions in multiple niches in multimodal landscapes. The algorithm introduces the concept of crowding selection to promote mating among members with qirnilar traits while allowing many members of the population to participate in mating. The algorithm uses worst among most similar replacement policy to promote competition among members with similar traits while allowing competition among members of different niches as well. We present empirical and theoretical results for the success of the multiniche crowding genetic algorithm for multimodal function optimization. The properties of the algorithm using different parameters are examined. We test the performance of the algorithm on problems of DNA Mapping, Aquifer Management, and the File Design Problem. Applications that combine the use of heuristics and special operators to solve problems in the areas of combinatorial optimization, grouping, and multi-objective optimization. We conclude by presenting the advantages and disadvantages of the algorithm and describing avenues for future investigation to answer other questions raised by this study.

  14. Optimization of phononic filters via genetic algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Hussein, M I [University of Colorado, Department of Aerospace Engineering Sciences, Boulder, Colorado 80309-0429 (United States); El-Beltagy, M A [Cairo University, Faculty of Computers and Information, 5 Dr. Ahmed Zewail Street, 12613 Giza (Egypt)

    2007-12-15

    A phononic crystal is commonly characterized by its dispersive frequency spectrum. With appropriate spatial distribution of the constituent material phases, spectral stop bands could be generated. Moreover, it is possible to control the number, the width, and the location of these bands within a frequency range of interest. This study aims at exploring the relationship between unit cell configuration and frequency spectrum characteristics. Focusing on 1D layered phononic crystals, and longitudinal wave propagation in the direction normal to the layering, the unit cell features of interest are the number of layers and the material phase and relative thickness of each layer. An evolutionary search for binary- and ternary-phase cell designs exhibiting a series of stop bands at predetermined frequencies is conducted. A specially formulated representation and set of genetic operators that break the symmetries in the problem are developed for this purpose. An array of optimal designs for a range of ratios in Young's modulus and density are obtained and the corresponding objective values (the degrees to which the resulting bands match the predetermined targets) are examined as a function of these ratios. It is shown that a rather complex filtering objective could be met with a high degree of success. Structures composed of the designed phononic crystals are excellent candidates for use in a wide range of applications including sound and vibration filtering.

  15. Optimization of phononic filters via genetic algorithms

    International Nuclear Information System (INIS)

    Hussein, M I; El-Beltagy, M A

    2007-01-01

    A phononic crystal is commonly characterized by its dispersive frequency spectrum. With appropriate spatial distribution of the constituent material phases, spectral stop bands could be generated. Moreover, it is possible to control the number, the width, and the location of these bands within a frequency range of interest. This study aims at exploring the relationship between unit cell configuration and frequency spectrum characteristics. Focusing on 1D layered phononic crystals, and longitudinal wave propagation in the direction normal to the layering, the unit cell features of interest are the number of layers and the material phase and relative thickness of each layer. An evolutionary search for binary- and ternary-phase cell designs exhibiting a series of stop bands at predetermined frequencies is conducted. A specially formulated representation and set of genetic operators that break the symmetries in the problem are developed for this purpose. An array of optimal designs for a range of ratios in Young's modulus and density are obtained and the corresponding objective values (the degrees to which the resulting bands match the predetermined targets) are examined as a function of these ratios. It is shown that a rather complex filtering objective could be met with a high degree of success. Structures composed of the designed phononic crystals are excellent candidates for use in a wide range of applications including sound and vibration filtering

  16. Crossover Improvement for the Genetic Algorithm in Information Retrieval.

    Science.gov (United States)

    Vrajitoru, Dana

    1998-01-01

    In information retrieval (IR), the aim of genetic algorithms (GA) is to help a system to find, in a huge documents collection, a good reply to a query expressed by the user. Analysis of phenomena seen during the implementation of a GA for IR has led to a new crossover operation, which is introduced and compared to other learning methods.…

  17. Optimization of composite panels using neural networks and genetic algorithms

    NARCIS (Netherlands)

    Ruijter, W.; Spallino, R.; Warnet, Laurent; de Boer, Andries

    2003-01-01

    The objective of this paper is to present first results of a running study on optimization of aircraft components (composite panels of a typical vertical tail plane) by using Genetic Algorithms (GA) and Neural Networks (NN). The panels considered are standardized to some extent but still there is a

  18. Genetic algorithms and Monte Carlo simulation for optimal plant design

    International Nuclear Information System (INIS)

    Cantoni, M.; Marseguerra, M.; Zio, E.

    2000-01-01

    We present an approach to the optimal plant design (choice of system layout and components) under conflicting safety and economic constraints, based upon the coupling of a Monte Carlo evaluation of plant operation with a Genetic Algorithms-maximization procedure. The Monte Carlo simulation model provides a flexible tool, which enables one to describe relevant aspects of plant design and operation, such as standby modes and deteriorating repairs, not easily captured by analytical models. The effects of deteriorating repairs are described by means of a modified Brown-Proschan model of imperfect repair which accounts for the possibility of an increased proneness to failure of a component after a repair. The transitions of a component from standby to active, and vice versa, are simulated using a multiplicative correlation model. The genetic algorithms procedure is demanded to optimize a profit function which accounts for the plant safety and economic performance and which is evaluated, for each possible design, by the above Monte Carlo simulation. In order to avoid an overwhelming use of computer time, for each potential solution proposed by the genetic algorithm, we perform only few hundreds Monte Carlo histories and, then, exploit the fact that during the genetic algorithm population evolution, the fit chromosomes appear repeatedly many times, so that the results for the solutions of interest (i.e. the best ones) attain statistical significance

  19. AC-600 reactor reloading pattern optimization by using genetic algorithms

    International Nuclear Information System (INIS)

    Wu Hongchun; Xie Zhongsheng; Yao Dong; Li Dongsheng; Zhang Zongyao

    2000-01-01

    The use of genetic algorithms to optimize reloading pattern of the nuclear power plant reactor is proposed. And a new encoding and translating method is given. Optimization results of minimizing core power peak and maximizing cycle length for both low-leakage and out-in loading pattern of AC-600 reactor are obtained

  20. Genetic algorithms applied to the nuclear power plant operation

    International Nuclear Information System (INIS)

    Schirru, R.; Martinez, A.S.; Pereira, C.M.N.A.

    2000-01-01

    Nuclear power plant operation often involves very important human decisions, such as actions to be taken after a nuclear accident/transient, or finding the best core reload pattern, a complex combinatorial optimization problem which requires expert knowledge. Due to the complexity involved in the decisions to be taken, computerized systems have been intensely explored in order to aid the operator. Following hardware advances, soft computing has been improved and, nowadays, intelligent technologies, such as genetic algorithms, neural networks and fuzzy systems, are being used to support operator decisions. In this chapter two main problems are explored: transient diagnosis and nuclear core refueling. Here, solutions to such kind of problems, based on genetic algorithms, are described. A genetic algorithm was designed to optimize the nuclear fuel reload of Angra-1 nuclear power plant. Results compared to those obtained by an expert reveal a gain in the burn-up cycle. Two other genetic algorithm approaches were used to optimize real time diagnosis systems. The first one learns partitions in the time series that represents the transients, generating a set of classification centroids. The other one involves the optimization of an adaptive vector quantization neural network. Results are shown and commented. (orig.)

  1. Time-Delay System Identification Using Genetic Algorithm

    DEFF Research Database (Denmark)

    Yang, Zhenyu; Seested, Glen Thane

    2013-01-01

    problem through an identification approach using the real coded Genetic Algorithm (GA). The desired FOPDT/SOPDT model is directly identified based on the measured system's input and output data. In order to evaluate the quality and performance of this GA-based approach, the proposed method is compared...

  2. A Parallel Genetic Algorithm for Automated Electronic Circuit Design

    Science.gov (United States)

    Lohn, Jason D.; Colombano, Silvano P.; Haith, Gary L.; Stassinopoulos, Dimitris; Norvig, Peter (Technical Monitor)

    2000-01-01

    We describe a parallel genetic algorithm (GA) that automatically generates circuit designs using evolutionary search. A circuit-construction programming language is introduced and we show how evolution can generate practical analog circuit designs. Our system allows circuit size (number of devices), circuit topology, and device values to be evolved. We present experimental results as applied to analog filter and amplifier design tasks.

  3. Performance of genetic algorithms in search for water splitting perovskites

    DEFF Research Database (Denmark)

    Jain, A.; Castelli, Ivano Eligio; Hautier, G.

    2013-01-01

    We examine the performance of genetic algorithms (GAs) in uncovering solar water light splitters over a space of almost 19,000 perovskite materials. The entire search space was previously calculated using density functional theory to determine solutions that fulfill constraints on stability, band...

  4. Identification of partial blockages in pipelines using genetic algorithms

    Indian Academy of Sciences (India)

    A methodology to identify the partial blockages in a simple pipeline using genetic algorithms for non-harmonic flows is presented in this paper. A sinusoidal flow generated by the periodic on-and-off operation of a valve at the outlet is investigated in the time domain and it is observed that pressure variation at the valve is ...

  5. A Genetic algorithm for evaluating the zeros (roots) of polynomial ...

    African Journals Online (AJOL)

    This paper presents a Genetic Algorithm software (which is a computational, search technique) for finding the zeros (roots) of any given polynomial function, and optimizing and solving N-dimensional systems of equations. The software is particularly useful since most of the classic schemes are not all embracing.

  6. Concrete Plant Operations Optimization Using Combined Simulation and Genetic Algorithms

    NARCIS (Netherlands)

    Cao, Ming; Lu, Ming; Zhang, Jian-Ping

    2004-01-01

    This work presents a new approach for concrete plant operations optimization by combining a ready mixed concrete (RMC) production simulation tool (called HKCONSIM) with a genetic algorithm (GA) based optimization procedure. A revamped HKCONSIM computer system can be used to automate the simulation

  7. Introduction to genetic algorithms as a modeling tool

    International Nuclear Information System (INIS)

    Wildberger, A.M.; Hickok, K.A.

    1990-01-01

    Genetic algorithms are search and classification techniques modeled on natural adaptive systems. This is an introduction to their use as a modeling tool with emphasis on prospects for their application in the power industry. It is intended to provide enough background information for its audience to begin to follow technical developments in genetic algorithms and to recognize those which might impact on electric power engineering. Beginning with a discussion of genetic algorithms and their origin as a model of biological adaptation, their advantages and disadvantages are described in comparison with other modeling tools such as simulation and neural networks in order to provide guidance in selecting appropriate applications. In particular, their use is described for improving expert systems from actual data and they are suggested as an aid in building mathematical models. Using the Thermal Performance Advisor as an example, it is suggested how genetic algorithms might be used to make a conventional expert system and mathematical model of a power plant adapt automatically to changes in the plant's characteristics

  8. Application of genetic algorithm in reactor fuel management

    International Nuclear Information System (INIS)

    Peng Gang

    2002-01-01

    The genetic algorithm (GA) has been used in reactor fuel management of core arrangement optimal calculation. The chromosome coding method has been selected, and the parameters in GA operators have been improved, so the quality and efficiency of calculation in GA program have been greatly improved. According to the result, better core fuel position arrangement can be obtained from the GA calculation

  9. Proposed genetic algorithms for construction site lay out

    NARCIS (Netherlands)

    Mawdesley, Michael J.; Al-Jibouri, Saad H.S.

    2003-01-01

    The positioning of temporary facilities on a construction site is an area of research which has been recognised as important but which has received relatively little attention. In this paper, a genetic algorithm is proposed to solve the problem in which m facilities are to be positioned to n

  10. Application of a genetic algorithm to core reload pattern optimization

    International Nuclear Information System (INIS)

    Tanker, E.; Tanker, A.Z.

    1994-01-01

    A genetic algorithm is applied to reload pattern optimization of a PWR core. Evaluating all different distributions of a given batch load separately is found slow and ineffective. Allowing patterns from different distributions to combine reproduce, an optimized pattern better than that obtained from from linear programming is found, albeit in a longer time. (authors). 5 refs., 2 tabs

  11. Genetic Algorithm and its Application in Optimal Sensor Layout

    Directory of Open Access Journals (Sweden)

    Xiang-Yang Chen

    2015-05-01

    Full Text Available This paper aims at the problem of multi sensor station distribution, based on multi- sensor systems of different types as the research object, in the analysis of various types of sensors with different application background, different indicators of demand, based on the different constraints, for all kinds of multi sensor station is studied, the application of genetic algorithms as a tool for the objective function of the models optimization, then the optimal various types of multi sensor station distribution plan, improve the performance of the system, and achieved good military effect. In the field of application of sensor radar, track measuring instrument, the satellite, passive positioning equipment of various types, specific problem, use care indicators and station arrangement between the mathematical model of geometry, using genetic algorithm to get the optimization results station distribution, to solve a variety of practical problems provides useful help, but also reflects the improved genetic algorithm in electronic weapon system based on multi sensor station distribution on the applicability and effectiveness of the optimization; finally the genetic algorithm for integrated optimization of multi sensor station distribution using the good to the training exercise tasks based on actual in, and have achieved good military effect.

  12. System control fuzzy neural sewage pumping stations using genetic algorithms

    Directory of Open Access Journals (Sweden)

    Владлен Николаевич Кузнецов

    2015-06-01

    Full Text Available It is considered the system of management of sewage pumping station with regulators based on a neuron network with fuzzy logic. Linguistic rules for the controller based on fuzzy logic, maintaining the level of effluent in the receiving tank within the prescribed limits are developed. The use of genetic algorithms for neuron network training is shown.

  13. Maintenance optimization in nuclear power plants through genetic algorithms

    International Nuclear Information System (INIS)

    Munoz, A.; Martorell, S.; Serradell, V.

    1999-01-01

    Establishing suitable scheduled maintenance tasks leads to optimizing the reliability of nuclear power plant safety systems. The articles addresses this subject, whilst endeavoring to tackle an overall optimization process for component availability and safety systems through the use of genetic algorithms. (Author) 20 refs

  14. Influence of crossover methods used by genetic algorithm-based ...

    Indian Academy of Sciences (India)

    numerical methods like Newton–Raphson, sequential homotopy calculation, Walsh ... But the paper does not touch upon the elements of crossover operators. ... if SHE problems are solved with optimization tools like GA (Schutten ..... Goldberg D E 1989 Genetic algorithms in search, optimization and machine learning.

  15. Real-Coded Quantum-Inspired Genetic Algorithm-Based BP Neural Network Algorithm

    Directory of Open Access Journals (Sweden)

    Jianyong Liu

    2015-01-01

    Full Text Available The method that the real-coded quantum-inspired genetic algorithm (RQGA used to optimize the weights and threshold of BP neural network is proposed to overcome the defect that the gradient descent method makes the algorithm easily fall into local optimal value in the learning process. Quantum genetic algorithm (QGA is with good directional global optimization ability, but the conventional QGA is based on binary coding; the speed of calculation is reduced by the coding and decoding processes. So, RQGA is introduced to explore the search space, and the improved varied learning rate is adopted to train the BP neural network. Simulation test shows that the proposed algorithm is effective to rapidly converge to the solution conformed to constraint conditions.

  16. Using genetic algorithms to calibrate a water quality model.

    Science.gov (United States)

    Liu, Shuming; Butler, David; Brazier, Richard; Heathwaite, Louise; Khu, Soon-Thiam

    2007-03-15

    With the increasing concern over the impact of diffuse pollution on water bodies, many diffuse pollution models have been developed in the last two decades. A common obstacle in using such models is how to determine the values of the model parameters. This is especially true when a model has a large number of parameters, which makes a full range of calibration expensive in terms of computing time. Compared with conventional optimisation approaches, soft computing techniques often have a faster convergence speed and are more efficient for global optimum searches. This paper presents an attempt to calibrate a diffuse pollution model using a genetic algorithm (GA). Designed to simulate the export of phosphorus from diffuse sources (agricultural land) and point sources (human), the Phosphorus Indicators Tool (PIT) version 1.1, on which this paper is based, consisted of 78 parameters. Previous studies have indicated the difficulty of full range model calibration due to the number of parameters involved. In this paper, a GA was employed to carry out the model calibration in which all parameters were involved. A sensitivity analysis was also performed to investigate the impact of operators in the GA on its effectiveness in optimum searching. The calibration yielded satisfactory results and required reasonable computing time. The application of the PIT model to the Windrush catchment with optimum parameter values was demonstrated. The annual P loss was predicted as 4.4 kg P/ha/yr, which showed a good fitness to the observed value.

  17. Genetic algorithm learning in a New Keynesian macroeconomic setup.

    Science.gov (United States)

    Hommes, Cars; Makarewicz, Tomasz; Massaro, Domenico; Smits, Tom

    2017-01-01

    In order to understand heterogeneous behavior amongst agents, empirical data from Learning-to-Forecast (LtF) experiments can be used to construct learning models. This paper follows up on Assenza et al. (2013) by using a Genetic Algorithms (GA) model to replicate the results from their LtF experiment. In this GA model, individuals optimize an adaptive, a trend following and an anchor coefficient in a population of general prediction heuristics. We replicate experimental treatments in a New-Keynesian environment with increasing complexity and use Monte Carlo simulations to investigate how well the model explains the experimental data. We find that the evolutionary learning model is able to replicate the three different types of behavior, i.e. convergence to steady state, stable oscillations and dampened oscillations in the treatments using one GA model. Heterogeneous behavior can thus be explained by an adaptive, anchor and trend extrapolating component and the GA model can be used to explain heterogeneous behavior in LtF experiments with different types of complexity.

  18. Feature selection using genetic algorithms for fetal heart rate analysis

    International Nuclear Information System (INIS)

    Xu, Liang; Redman, Christopher W G; Georgieva, Antoniya; Payne, Stephen J

    2014-01-01

    The fetal heart rate (FHR) is monitored on a paper strip (cardiotocogram) during labour to assess fetal health. If necessary, clinicians can intervene and assist with a prompt delivery of the baby. Data-driven computerized FHR analysis could help clinicians in the decision-making process. However, selecting the best computerized FHR features that relate to labour outcome is a pressing research problem. The objective of this study is to apply genetic algorithms (GA) as a feature selection method to select the best feature subset from 64 FHR features and to integrate these best features to recognize unfavourable FHR patterns. The GA was trained on 404 cases and tested on 106 cases (both balanced datasets) using three classifiers, respectively. Regularization methods and backward selection were used to optimize the GA. Reasonable classification performance is shown on the testing set for the best feature subset (Cohen's kappa values of 0.45 to 0.49 using different classifiers). This is, to our knowledge, the first time that a feature selection method for FHR analysis has been developed on a database of this size. This study indicates that different FHR features, when integrated, can show good performance in predicting labour outcome. It also gives the importance of each feature, which will be a valuable reference point for further studies. (paper)

  19. Virus evolutionary genetic algorithm for task collaboration of logistics distribution

    Science.gov (United States)

    Ning, Fanghua; Chen, Zichen; Xiong, Li

    2005-12-01

    In order to achieve JIT (Just-In-Time) level and clients' maximum satisfaction in logistics collaboration, a Virus Evolutionary Genetic Algorithm (VEGA) was put forward under double constraints of logistics resource and operation sequence. Based on mathematic description of a multiple objective function, the algorithm was designed to schedule logistics tasks with different due dates and allocate them to network members. By introducing a penalty item, make span and customers' satisfaction were expressed in fitness function. And a dynamic adaptive probability of infection was used to improve performance of local search. Compared to standard Genetic Algorithm (GA), experimental result illustrates the performance superiority of VEGA. So the VEGA can provide a powerful decision-making technique for optimizing resource configuration in logistics network.

  20. Fractional Dynamics of Genetic Algorithms Using Hexagonal Space Tessellation

    Directory of Open Access Journals (Sweden)

    J. A. Tenreiro Machado

    2013-01-01

    Full Text Available The paper formulates a genetic algorithm that evolves two types of objects in a plane. The fitness function promotes a relationship between the objects that is optimal when some kind of interface between them occurs. Furthermore, the algorithm adopts an hexagonal tessellation of the two-dimensional space for promoting an efficient method of the neighbour modelling. The genetic algorithm produces special patterns with resemblances to those revealed in percolation phenomena or in the symbiosis found in lichens. Besides the analysis of the spacial layout, a modelling of the time evolution is performed by adopting a distance measure and the modelling in the Fourier domain in the perspective of fractional calculus. The results reveal a consistent, and easy to interpret, set of model parameters for distinct operating conditions.

  1. Detecting structural breaks in time series via genetic algorithms

    DEFF Research Database (Denmark)

    Doerr, Benjamin; Fischer, Paul; Hilbert, Astrid

    2016-01-01

    of the time series under consideration is available. Therefore, a black-box optimization approach is our method of choice for detecting structural breaks. We describe a genetic algorithm framework which easily adapts to a large number of statistical settings. To evaluate the usefulness of different crossover...... and mutation operations for this problem, we conduct extensive experiments to determine good choices for the parameters and operators of the genetic algorithm. One surprising observation is that use of uniform and one-point crossover together gave significantly better results than using either crossover...... operator alone. Moreover, we present a specific fitness function which exploits the sparse structure of the break points and which can be evaluated particularly efficiently. The experiments on artificial and real-world time series show that the resulting algorithm detects break points with high precision...

  2. Genetic algorithms: Theory and applications in the safety domain

    International Nuclear Information System (INIS)

    Marseguerra, M.; Zio, E.

    2001-01-01

    This work illustrates the fundamentals underlying optimization by genetic algorithms. All the steps of the procedure are sketched in details for both the traditional breeding algorithm as well as for more sophisticated breeding procedures. The necessity of affine transforming the fitness function, object of the optimization, is discussed in detail, together with the transformation itself. Procedures for the inducement of species and niches are also presented. The theoretical aspects of the work are corroborated by a demonstration of the potential of genetic algorithm optimization procedures on three different case studies. The first case study deals with the design of the pressure stages of a natural gas pipeline system; the second one treats a reliability allocation problem in system configuration design; the last case regards the selection of maintenance and repair strategies for the logistic management of a risky plant. (author)

  3. Genetic algorithm based reactive power dispatch for voltage stability improvement

    Energy Technology Data Exchange (ETDEWEB)

    Devaraj, D. [Department of Electrical and Electronics, Kalasalingam University, Krishnankoil 626 190 (India); Roselyn, J. Preetha [Department of Electrical and Electronics, SRM University, Kattankulathur 603 203, Chennai (India)

    2010-12-15

    Voltage stability assessment and control form the core function in a modern energy control centre. This paper presents an improved Genetic algorithm (GA) approach for voltage stability enhancement. The proposed technique is based on the minimization of the maximum of L-indices of load buses. Generator voltages, switchable VAR sources and transformer tap changers are used as optimization variables of this problem. The proposed approach permits the optimization variables to be represented in their natural form in the genetic population. For effective genetic processing, the crossover and mutation operators which can directly deal with the floating point numbers and integers are used. The proposed algorithm has been tested on IEEE 30-bus and IEEE 57-bus test systems and successful results have been obtained. (author)

  4. Global structural optimizations of surface systems with a genetic algorithm

    International Nuclear Information System (INIS)

    Chuang, Feng-Chuan

    2005-01-01

    Global structural optimizations with a genetic algorithm were performed for atomic cluster and surface systems including aluminum atomic clusters, Si magic clusters on the Si(111) 7 x 7 surface, silicon high-index surfaces, and Ag-induced Si(111) reconstructions. First, the global structural optimizations of neutral aluminum clusters Al n (n up to 23) were performed using a genetic algorithm coupled with a tight-binding potential. Second, a genetic algorithm in combination with tight-binding and first-principles calculations were performed to study the structures of magic clusters on the Si(111) 7 x 7 surface. Extensive calculations show that the magic cluster observed in scanning tunneling microscopy (STM) experiments consist of eight Si atoms. Simulated STM images of the Si magic cluster exhibit a ring-like feature similar to STM experiments. Third, a genetic algorithm coupled with a highly optimized empirical potential were used to determine the lowest energy structure of high-index semiconductor surfaces. The lowest energy structures of Si(105) and Si(114) were determined successfully. The results of Si(105) and Si(114) are reported within the framework of highly optimized empirical potential and first-principles calculations. Finally, a genetic algorithm coupled with Si and Ag tight-binding potentials were used to search for Ag-induced Si(111) reconstructions at various Ag and Si coverages. The optimized structural models of √3 x √3, 3 x 1, and 5 x 2 phases were reported using first-principles calculations. A novel model is found to have lower surface energy than the proposed double-honeycomb chained (DHC) model both for Au/Si(111) 5 x 2 and Ag/Si(111) 5 x 2 systems

  5. Genetic algorithm based on qubits and quantum gates

    International Nuclear Information System (INIS)

    Silva, Joao Batista Rosa; Ramos, Rubens Viana

    2003-01-01

    Full text: Genetic algorithm, a computational technique based on the evolution of the species, in which a possible solution of the problem is coded in a binary string, called chromosome, has been used successfully in several kinds of problems, where the search of a minimal or a maximal value is necessary, even when local minima are present. A natural generalization of a binary string is a qubit string. Hence, it is possible to use the structure of a genetic algorithm having a sequence of qubits as a chromosome and using quantum operations in the reproduction in order to find the best solution in some problems of quantum information. For example, given a unitary matrix U what is the pair of qubits that, when applied at the input, provides the output state with maximal entanglement? In order to solve this problem, a population of chromosomes of two qubits was created. The crossover was performed applying the quantum gates CNOT and SWAP at the pair of qubits, while the mutation was performed applying the quantum gates Hadamard, Z and Not in a single qubit. The result was compared with a classical genetic algorithm used to solve the same problem. A hundred simulations using the same U matrix was performed. Both algorithms, hereafter named by CGA (classical) and QGA (using qu bits), reached good results close to 1 however, the number of generations needed to find the best result was lower for the QGA. Another problem where the QGA can be useful is in the calculation of the relative entropy of entanglement. We have tested our algorithm using 100 pure states chosen randomly. The stop criterion used was the error lower than 0.01. The main advantages of QGA are its good precision, robustness and very easy implementation. The main disadvantage is its low velocity, as happen for all kind of genetic algorithms. (author)

  6. Evaluation of algorithms used to order markers on genetic maps.

    Science.gov (United States)

    Mollinari, M; Margarido, G R A; Vencovsky, R; Garcia, A A F

    2009-12-01

    When building genetic maps, it is necessary to choose from several marker ordering algorithms and criteria, and the choice is not always simple. In this study, we evaluate the efficiency of algorithms try (TRY), seriation (SER), rapid chain delineation (RCD), recombination counting and ordering (RECORD) and unidirectional growth (UG), as well as the criteria PARF (product of adjacent recombination fractions), SARF (sum of adjacent recombination fractions), SALOD (sum of adjacent LOD scores) and LHMC (likelihood through hidden Markov chains), used with the RIPPLE algorithm for error verification, in the construction of genetic linkage maps. A linkage map of a hypothetical diploid and monoecious plant species was simulated containing one linkage group and 21 markers with fixed distance of 3 cM between them. In all, 700 F(2) populations were randomly simulated with 100 and 400 individuals with different combinations of dominant and co-dominant markers, as well as 10 and 20% of missing data. The simulations showed that, in the presence of co-dominant markers only, any combination of algorithm and criteria may be used, even for a reduced population size. In the case of a smaller proportion of dominant markers, any of the algorithms and criteria (except SALOD) investigated may be used. In the presence of high proportions of dominant markers and smaller samples (around 100), the probability of repulsion linkage increases between them and, in this case, use of the algorithms TRY and SER associated to RIPPLE with criterion LHMC would provide better results.

  7. First results of genetic algorithm application in ML image reconstruction in emission tomography

    International Nuclear Information System (INIS)

    Smolik, W.

    1999-01-01

    This paper concerns application of genetic algorithm in maximum likelihood image reconstruction in emission tomography. The example of genetic algorithm for image reconstruction is presented. The genetic algorithm was based on the typical genetic scheme modified due to the nature of solved problem. The convergence of algorithm was examined. The different adaption functions, selection and crossover methods were verified. The algorithm was tested on simulated SPECT data. The obtained results of image reconstruction are discussed. (author)

  8. Use of a genetic algorithm in a subchannel model

    International Nuclear Information System (INIS)

    Alberto Teyssedou; Armando Nava-Dominguez

    2005-01-01

    Full text of publication follows: The channel of a nuclear reactor contains the fuel bundles which are made up of fuel elements distributed in a manner that creates a series of interconnected subchannels through which the coolant flows. Subchannel codes are used to determine local flow variables; these codes consider the complex geometry of a nuclear fuel bundle as being divided in simple parallel and interconnected cells called 'subchannels'. Each subchannel is bounded by the solid walls of the fuel rods or by imaginary boundaries placed between adjacent subchannels. In each subchannel the flow is considered as one dimensional, therefore lateral mixing mechanisms between subchannels should be taken into account. These mixing mechanisms are: Diversion cross-flow, Turbulent mixing, Turbulent void diffusion, Void drift and Buoyancy drift; they are implemented as independent contribution terms in a pseudo-vectorial lateral momentum equation. These mixing terms are calculated with correlations that require the use of empirical coefficients. It has been observed, however, that there is no unique set of coefficients and or correlations that can be used to predict a complete range of experimental conditions. To avoid this drawback, in this paper a Genetic Algorithm (GA) was coupled to a subchannel model. The use of a GA in conjunction with an appropriate objective function allows the subchannel model to internally determine the optimal values of the coefficients without user intervention. The subchannel model requires two diffusion coefficients, the drift flux two-phase flow distribution coefficient, C 0 , and a coefficient used to control the lateral pressure losses. The GA algorithm was implemented in order to find the most appropriate values of these four coefficients. Genetic algorithms (GA) are based on the theory of evolution; thus, the GA manipulates a population of individuals (chromosomes) in order to evolve them towards a best adaptation (fitness criterion) to

  9. Multi-user cognitive radio network resource allocation based on the adaptive niche immune genetic algorithm

    International Nuclear Information System (INIS)

    Zu Yun-Xiao; Zhou Jie

    2012-01-01

    Multi-user cognitive radio network resource allocation based on the adaptive niche immune genetic algorithm is proposed, and a fitness function is provided. Simulations are conducted using the adaptive niche immune genetic algorithm, the simulated annealing algorithm, the quantum genetic algorithm and the simple genetic algorithm, respectively. The results show that the adaptive niche immune genetic algorithm performs better than the other three algorithms in terms of the multi-user cognitive radio network resource allocation, and has quick convergence speed and strong global searching capability, which effectively reduces the system power consumption and bit error rate. (geophysics, astronomy, and astrophysics)

  10. Genetic Algorithm Applied to the Eigenvalue Equalization Filtered-x LMS Algorithm (EE-FXLMS

    Directory of Open Access Journals (Sweden)

    Stephan P. Lovstedt

    2008-01-01

    Full Text Available The FXLMS algorithm, used extensively in active noise control (ANC, exhibits frequency-dependent convergence behavior. This leads to degraded performance for time-varying tonal noise and noise with multiple stationary tones. Previous work by the authors proposed the eigenvalue equalization filtered-x least mean squares (EE-FXLMS algorithm. For that algorithm, magnitude coefficients of the secondary path transfer function are modified to decrease variation in the eigenvalues of the filtered-x autocorrelation matrix, while preserving the phase, giving faster convergence and increasing overall attenuation. This paper revisits the EE-FXLMS algorithm, using a genetic algorithm to find magnitude coefficients that give the least variation in eigenvalues. This method overcomes some of the problems with implementing the EE-FXLMS algorithm arising from finite resolution of sampled systems. Experimental control results using the original secondary path model, and a modified secondary path model for both the previous implementation of EE-FXLMS and the genetic algorithm implementation are compared.

  11. Acoustic Impedance Inversion of Seismic Data Using Genetic Algorithm

    Science.gov (United States)

    Eladj, Said; Djarfour, Noureddine; Ferahtia, Djalal; Ouadfeul, Sid-Ali

    2013-04-01

    The inversion of seismic data can be used to constrain estimates of the Earth's acoustic impedance structure. This kind of problem is usually known to be non-linear, high-dimensional, with a complex search space which may be riddled with many local minima, and results in irregular objective functions. We investigate here the performance and the application of a genetic algorithm, in the inversion of seismic data. The proposed algorithm has the advantage of being easily implemented without getting stuck in local minima. The effects of population size, Elitism strategy, uniform cross-over and lower mutation are examined. The optimum solution parameters and performance were decided as a function of the testing error convergence with respect to the generation number. To calculate the fitness function, we used L2 norm of the sample-to-sample difference between the reference and the inverted trace. The cross-over probability is of 0.9-0.95 and mutation has been tested at 0.01 probability. The application of such a genetic algorithm to synthetic data shows that the inverted acoustic impedance section was efficient. Keywords: Seismic, Inversion, acoustic impedance, genetic algorithm, fitness functions, cross-over, mutation.

  12. Genetic algorithm enhanced by machine learning in dynamic aperture optimization

    Science.gov (United States)

    Li, Yongjun; Cheng, Weixing; Yu, Li Hua; Rainer, Robert

    2018-05-01

    With the aid of machine learning techniques, the genetic algorithm has been enhanced and applied to the multi-objective optimization problem presented by the dynamic aperture of the National Synchrotron Light Source II (NSLS-II) Storage Ring. During the evolution processes employed by the genetic algorithm, the population is classified into different clusters in the search space. The clusters with top average fitness are given "elite" status. Intervention on the population is implemented by repopulating some potentially competitive candidates based on the experience learned from the accumulated data. These candidates replace randomly selected candidates among the original data pool. The average fitness of the population is therefore improved while diversity is not lost. Maintaining diversity ensures that the optimization is global rather than local. The quality of the population increases and produces more competitive descendants accelerating the evolution process significantly. When identifying the distribution of optimal candidates, they appear to be located in isolated islands within the search space. Some of these optimal candidates have been experimentally confirmed at the NSLS-II storage ring. The machine learning techniques that exploit the genetic algorithm can also be used in other population-based optimization problems such as particle swarm algorithm.

  13. Improved multilayer OLED architecture using evolutionary genetic algorithm

    International Nuclear Information System (INIS)

    Quirino, W.G.; Teixeira, K.C.; Legnani, C.; Calil, V.L.; Messer, B.; Neto, O.P. Vilela; Pacheco, M.A.C.; Cremona, M.

    2009-01-01

    Organic light-emitting diodes (OLEDs) constitute a new class of emissive devices, which present high efficiency and low voltage operation, among other advantages over current technology. Multilayer architecture (M-OLED) is generally used to optimize these devices, specially overcoming the suppression of light emission due to the exciton recombination near the metal layers. However, improvement in recombination, transport and charge injection can also be achieved by blending electron and hole transporting layers into the same one. Graded emissive region devices can provide promising results regarding quantum and power efficiency and brightness, as well. The massive number of possible model configurations, however, suggests that a search algorithm would be more suitable for this matter. In this work, multilayer OLEDs were simulated and fabricated using Genetic Algorithms (GAs) as evolutionary strategy to improve their efficiency. Genetic Algorithms are stochastic algorithms based on genetic inheritance and Darwinian strife to survival. In our simulations, it was assumed a 50 nm width graded region, divided into five equally sized layers. The relative concentrations of the materials within each layer were optimized to obtain the lower V/J 0.5 ratio, where V is the applied voltage and J the current density. The best M-OLED architecture obtained by genetic algorithm presented a V/J 0.5 ratio nearly 7% lower than the value reported in the literature. In order to check the experimental validity of the improved results obtained in the simulations, two M-OLEDs with different architectures were fabricated by thermal deposition in high vacuum environment. The results of the comparison between simulation and some experiments are presented and discussed.

  14. Optimization of Antennas using a Hybrid Genetic-Algorithm Space-Mapping Algorithm

    DEFF Research Database (Denmark)

    Pantoja, M.F.; Bretones, A.R.; Meincke, Peter

    2006-01-01

    A hybrid global-local optimization technique for the design of antennas is presented. It consists of the subsequent application of a Genetic Algorithm (GA) that employs coarse models in the simulations and a space mapping (SM) that refines the solution found in the previous stage. The technique...

  15. Genetic algorithms and their use in Geophysical Problems

    Energy Technology Data Exchange (ETDEWEB)

    Parker, Paul B. [Univ. of California, Berkeley, CA (United States)

    1999-04-01

    Genetic algorithms (GAs), global optimization methods that mimic Darwinian evolution are well suited to the nonlinear inverse problems of geophysics. A standard genetic algorithm selects the best or ''fittest'' models from a ''population'' and then applies operators such as crossover and mutation in order to combine the most successful characteristics of each model and produce fitter models. More sophisticated operators have been developed, but the standard GA usually provides a robust and efficient search. Although the choice of parameter settings such as crossover and mutation rate may depend largely on the type of problem being solved, numerous results show that certain parameter settings produce optimal performance for a wide range of problems and difficulties. In particular, a low (about half of the inverse of the population size) mutation rate is crucial for optimal results, but the choice of crossover method and rate do not seem to affect performance appreciably. Optimal efficiency is usually achieved with smaller (< 50) populations. Lastly, tournament selection appears to be the best choice of selection methods due to its simplicity and its autoscaling properties. However, if a proportional selection method is used such as roulette wheel selection, fitness scaling is a necessity, and a high scaling factor (> 2.0) should be used for the best performance. Three case studies are presented in which genetic algorithms are used to invert for crustal parameters. The first is an inversion for basement depth at Yucca mountain using gravity data, the second an inversion for velocity structure in the crust of the south island of New Zealand using receiver functions derived from teleseismic events, and the third is a similar receiver function inversion for crustal velocities beneath the Mendocino Triple Junction region of Northern California. The inversions demonstrate that genetic algorithms are effective in solving problems

  16. A Dedicated Genetic Algorithm for Localization of Moving Magnetic Objects

    Directory of Open Access Journals (Sweden)

    Roger Alimi

    2015-09-01

    Full Text Available A dedicated Genetic Algorithm (GA has been developed to localize the trajectory of ferromagnetic moving objects within a bounded perimeter. Localization of moving ferromagnetic objects is an important tool because it can be employed in situations when the object is obscured. This work is innovative for two main reasons: first, the GA has been tuned to provide an accurate and fast solution to the inverse magnetic field equations problem. Second, the algorithm has been successfully tested using real-life experimental data. Very accurate trajectory localization estimations were obtained over a wide range of scenarios.

  17. Control of the lighting system using a genetic algorithm

    Directory of Open Access Journals (Sweden)

    Čongradac Velimir D.

    2012-01-01

    Full Text Available The manufacturing, distribution and use of electricity are of fundamental importance for the social life and they have the biggest influence on the environment associated with any human activity. The energy needed for building lighting makes up 20-40% of the total consumption. This paper displays the development of the mathematical model and genetic algorithm for the control of dimmable lighting on problems of regulating the level of internal lighting and increase of energetic efficiency using daylight. A series of experiments using the optimization algorithm on the realized model confirmed very high savings in electricity consumption.

  18. A pipelined FPGA implementation of an encryption algorithm based on genetic algorithm

    Science.gov (United States)

    Thirer, Nonel

    2013-05-01

    With the evolution of digital data storage and exchange, it is essential to protect the confidential information from every unauthorized access. High performance encryption algorithms were developed and implemented by software and hardware. Also many methods to attack the cipher text were developed. In the last years, the genetic algorithm has gained much interest in cryptanalysis of cipher texts and also in encryption ciphers. This paper analyses the possibility to use the genetic algorithm as a multiple key sequence generator for an AES (Advanced Encryption Standard) cryptographic system, and also to use a three stages pipeline (with four main blocks: Input data, AES Core, Key generator, Output data) to provide a fast encryption and storage/transmission of a large amount of data.

  19. Efficient Feedforward Linearization Technique Using Genetic Algorithms for OFDM Systems

    Directory of Open Access Journals (Sweden)

    García Paloma

    2010-01-01

    Full Text Available Feedforward is a linearization method that simultaneously offers wide bandwidth and good intermodulation distortion suppression; so it is a good choice for Orthogonal Frequency Division Multiplexing (OFDM systems. Feedforward structure consists of two loops, being necessary an accurate adjustment between them along the time, and when temperature, environmental, or operating changes are produced. Amplitude and phase imbalances of the circuit elements in both loops produce mismatched effects that lead to degrade its performance. A method is proposed to compensate these mismatches, introducing two complex coefficients calculated by means of a genetic algorithm. A full study is carried out to choose the optimal parameters of the genetic algorithm applied to wideband systems based on OFDM technologies, which are very sensitive to nonlinear distortions. The method functionality has been verified by means of simulation.

  20. Genetic algorithms and the analysis of SnIa data

    International Nuclear Information System (INIS)

    Nesseris, Savvas

    2011-01-01

    The Genetic Algorithm is a heuristic that can be used to produce model independent solutions to an optimization problem, thus making it ideal for use in cosmology and more specifically in the analysis of type Ia supernovae data. In this work we use the Genetic Algorithms (GA) in order to derive a null test on the spatially flat cosmological constant model ΛCDM. This is done in two steps: first, we apply the GA to the Constitution SNIa data in order to acquire a model independent reconstruction of the expansion history of the Universe H(z) and second, we use the reconstructed H(z) in conjunction with the Om statistic, which is constant only for the ΛCDM model, to derive our constraints. We find that while ΛCDM is consistent with the data at the 2σ level, some deviations from ΛCDM model at low redshifts can be accommodated.

  1. Stabilization of Electromagnetic Suspension System Behavior by Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Abbas Najar Khoda Bakhsh

    2012-07-01

    Full Text Available Electromagnetic suspension system with a nonlinear and unstable behavior, is used in maglev trains. In this paper a linear mathematical model of system is achieved and the state feedback method is used to improve the system stability. The control coefficients are tuned by two different methods, Riccati and a new method based on Genetic algorithm. In this new proposed method, we use Genetic algorithm to achieve the optimum values of control coefficients. The results of the system simulation by Matlab indicate the effectiveness of new proposed system. When a new reference of air gap is needed or a new external force is added, the proposed system could omit the vibration and shake of the train coupe and so, passengers feel more comfortable.

  2. Genetic Algorithm Design of a 3D Printed Heat Sink

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Tong [ORNL; Ozpineci, Burak [ORNL; Ayers, Curtis William [ORNL

    2016-01-01

    In this paper, a genetic algorithm- (GA-) based approach is discussed for designing heat sinks based on total heat generation and dissipation for a pre-specified size andshape. This approach combines random iteration processesand genetic algorithms with finite element analysis (FEA) to design the optimized heat sink. With an approach that prefers survival of the fittest , a more powerful heat sink can bedesigned which can cool power electronics more efficiently. Some of the resulting designs can only be 3D printed due totheir complexity. In addition to describing the methodology, this paper also includes comparisons of different cases to evaluate the performance of the newly designed heat sinkcompared to commercially available heat sinks.

  3. Use of genetic algorithms for optimization of subchannel simulations

    International Nuclear Information System (INIS)

    Nava Dominguez, A.

    2004-01-01

    To facilitate the modeling of a rod fuel bundle, the most common used method consist in dividing the complex cross-sectional area in small subsections called subchannels. To close the system equations, a mixture model is used to represent the intersubchannel interactions. These interactions are as follows: diversion cross-flow, turbulent void diffusion, void drift and buoyancy drift. Amongst these mechanisms, the turbulent void diffusion and void drift are frequently modelled using diffusion coefficients. In this work, a novel approach has been employed where an existing subchannel code coupled to a genetic algorithm code which were used to optimize these coefficients. After several numerical simulations, a new objective function based in the principle of minimum dissipated energy was developed. The use of this function in the genetic algorithm coupled to the subchannel code, gave results in good agreement with the experimental data

  4. Exergetic optimization of turbofan engine with genetic algorithm method

    Energy Technology Data Exchange (ETDEWEB)

    Turan, Onder [Anadolu University, School of Civil Aviation (Turkey)], e-mail: onderturan@anadolu.edu.tr

    2011-07-01

    With the growth of passenger numbers, emissions from the aeronautics sector are increasing and the industry is now working on improving engine efficiency to reduce fuel consumption. The aim of this study is to present the use of genetic algorithms, an optimization method based on biological principles, to optimize the exergetic performance of turbofan engines. The optimization was carried out using exergy efficiency, overall efficiency and specific thrust of the engine as evaluation criteria and playing on pressure and bypass ratio, turbine inlet temperature and flight altitude. Results showed exergy efficiency can be maximized with higher altitudes, fan pressure ratio and turbine inlet temperature; the turbine inlet temperature is the most important parameter for increased exergy efficiency. This study demonstrated that genetic algorithms are effective in optimizing complex systems in a short time.

  5. Quantum control using genetic algorithms in quantum communication: superdense coding

    International Nuclear Information System (INIS)

    Domínguez-Serna, Francisco; Rojas, Fernando

    2015-01-01

    We present a physical example model of how Quantum Control with genetic algorithms is applied to implement the quantum superdense code protocol. We studied a model consisting of two quantum dots with an electron with spin, including spin-orbit interaction. The electron and the spin get hybridized with the site acquiring two degrees of freedom, spin and charge. The system has tunneling and site energies as time dependent control parameters that are optimized by means of genetic algorithms to prepare a hybrid Bell-like state used as a transmission channel. This state is transformed to obtain any state of the four Bell basis as required by superdense protocol to transmit two bits of classical information. The control process protocol is equivalent to implement one of the quantum gates in the charge subsystem. Fidelities larger than 99.5% are achieved for the hybrid entangled state preparation and the superdense operations. (paper)

  6. Optimum Actuator Selection with a Genetic Algorithm for Aircraft Control

    Science.gov (United States)

    Rogers, James L.

    2004-01-01

    The placement of actuators on a wing determines the control effectiveness of the airplane. One approach to placement maximizes the moments about the pitch, roll, and yaw axes, while minimizing the coupling. For example, the desired actuators produce a pure roll moment without at the same time causing much pitch or yaw. For a typical wing, there is a large set of candidate locations for placing actuators, resulting in a substantially larger number of combinations to examine in order to find an optimum placement satisfying the mission requirements and mission constraints. A genetic algorithm has been developed for finding the best placement for four actuators to produce an uncoupled pitch moment. The genetic algorithm has been extended to find the minimum number of actuators required to provide uncoupled pitch, roll, and yaw control. A simplified, untapered, unswept wing is the model for each application.

  7. Resizing Technique-Based Hybrid Genetic Algorithm for Optimal Drift Design of Multistory Steel Frame Buildings

    Directory of Open Access Journals (Sweden)

    Hyo Seon Park

    2014-01-01

    Full Text Available Since genetic algorithm-based optimization methods are computationally expensive for practical use in the field of structural optimization, a resizing technique-based hybrid genetic algorithm for the drift design of multistory steel frame buildings is proposed to increase the convergence speed of genetic algorithms. To reduce the number of structural analyses required for the convergence, a genetic algorithm is combined with a resizing technique that is an efficient optimal technique to control the drift of buildings without the repetitive structural analysis. The resizing technique-based hybrid genetic algorithm proposed in this paper is applied to the minimum weight design of three steel frame buildings. To evaluate the performance of the algorithm, optimum weights, computational times, and generation numbers from the proposed algorithm are compared with those from a genetic algorithm. Based on the comparisons, it is concluded that the hybrid genetic algorithm shows clear improvements in convergence properties.

  8. A Case Study of a Multiobjective Elitist Recombinative Genetic Algorithm with Coevolutionary Sharing

    NARCIS (Netherlands)

    Neef, R.M.; Thierens, D.; Arciszewski, H.F.R.

    1999-01-01

    We present a multiobjective genetic algorithm that incorporates various genetic algorithm techniques that have been proven to be efficient and robust in their problem domain. More specifically, we integrate rank based selection, adaptive niching through coevolutionary sharing, elitist recombination,

  9. A case study of a multiobjective recombinative genetic algorithm with coevolutionary sharing

    NARCIS (Netherlands)

    Neef, R.M.; Thierens, D.; Arciszewski, H.F.R.

    1999-01-01

    We present a multiobjective genetic algorithm that incorporates various genetic algorithm techniques that have been proven to be efficient and robust in their problem domain. More specifically, we integrate rank based selection, adaptive niching through coevolutionary sharing, elitist recombination,

  10. Digital Image Encryption Algorithm Design Based on Genetic Hyperchaos

    Directory of Open Access Journals (Sweden)

    Jian Wang

    2016-01-01

    Full Text Available In view of the present chaotic image encryption algorithm based on scrambling (diffusion is vulnerable to choosing plaintext (ciphertext attack in the process of pixel position scrambling, we put forward a image encryption algorithm based on genetic super chaotic system. The algorithm, by introducing clear feedback to the process of scrambling, makes the scrambling effect related to the initial chaos sequence and the clear text itself; it has realized the image features and the organic fusion of encryption algorithm. By introduction in the process of diffusion to encrypt plaintext feedback mechanism, it improves sensitivity of plaintext, algorithm selection plaintext, and ciphertext attack resistance. At the same time, it also makes full use of the characteristics of image information. Finally, experimental simulation and theoretical analysis show that our proposed algorithm can not only effectively resist plaintext (ciphertext attack, statistical attack, and information entropy attack but also effectively improve the efficiency of image encryption, which is a relatively secure and effective way of image communication.

  11. Hybrid Genetic Algorithm Optimization for Case Based Reasoning Systems

    International Nuclear Information System (INIS)

    Mohamed, A.H.

    2008-01-01

    The success of a CBR system largely depen ds on an effective retrieval of useful prior case for the problem. Nearest neighbor and induction are the main CBR retrieval algorithms. Each of them can be more suitable in different situations. Integrated the two retrieval algorithms can catch the advantages of both of them. But, they still have some limitations facing the induction retrieval algorithm when dealing with a noisy data, a large number of irrelevant features, and different types of data. This research utilizes a hybrid approach using genetic algorithms (GAs) to case-based induction retrieval of the integrated nearest neighbor - induction algorithm in an attempt to overcome these limitations and increase the overall classification accuracy. GAs can be used to optimize the search space of all the possible subsets of the features set. It can deal with the irrelevant and noisy features while still achieving a significant improvement of the retrieval accuracy. Therefore, the proposed CBR-GA introduces an effective general purpose retrieval algorithm that can improve the performance of CBR systems. It can be applied in many application areas. CBR-GA has proven its success when applied for different problems in real-life

  12. Genomic multiple sequence alignments: refinement using a genetic algorithm

    Directory of Open Access Journals (Sweden)

    Lefkowitz Elliot J

    2005-08-01

    Full Text Available Abstract Background Genomic sequence data cannot be fully appreciated in isolation. Comparative genomics – the practice of comparing genomic sequences from different species – plays an increasingly important role in understanding the genotypic differences between species that result in phenotypic differences as well as in revealing patterns of evolutionary relationships. One of the major challenges in comparative genomics is producing a high-quality alignment between two or more related genomic sequences. In recent years, a number of tools have been developed for aligning large genomic sequences. Most utilize heuristic strategies to identify a series of strong sequence similarities, which are then used as anchors to align the regions between the anchor points. The resulting alignment is globally correct, but in many cases is suboptimal locally. We describe a new program, GenAlignRefine, which improves the overall quality of global multiple alignments by using a genetic algorithm to improve local regions of alignment. Regions of low quality are identified, realigned using the program T-Coffee, and then refined using a genetic algorithm. Because a better COFFEE (Consistency based Objective Function For alignmEnt Evaluation score generally reflects greater alignment quality, the algorithm searches for an alignment that yields a better COFFEE score. To improve the intrinsic slowness of the genetic algorithm, GenAlignRefine was implemented as a parallel, cluster-based program. Results We tested the GenAlignRefine algorithm by running it on a Linux cluster to refine sequences from a simulation, as well as refine a multiple alignment of 15 Orthopoxvirus genomic sequences approximately 260,000 nucleotides in length that initially had been aligned by Multi-LAGAN. It took approximately 150 minutes for a 40-processor Linux cluster to optimize some 200 fuzzy (poorly aligned regions of the orthopoxvirus alignment. Overall sequence identity increased only

  13. OPTIMIZATION OF LONG RURAL FEEDERS USING A GENETIC ALGORITHM

    International Nuclear Information System (INIS)

    Wishart, Michael; Ledwich, Gerard; Ghosh, Arindam; Ivanovich, Grujica

    2010-01-01

    This paper describes the optimization of conductor size and the voltage regulator location and magnitude of long rural distribution lines. The optimization minimizes the lifetime cost of the lines, including capital costs and losses while observing voltage drop and operational constraints using a Genetic Algorithm (GA). The GA optimization is applied to a real Single Wire Earth Return (SWER) network in regional Queensland and results are presented.

  14. Multiobjective genetic algorithm approaches to project scheduling under risk

    OpenAIRE

    Kılıç, Murat; Kilic, Murat

    2003-01-01

    In this thesis, project scheduling under risk is chosen as the topic of research. Project scheduling under risk is defined as a biobjective decision problem and is formulated as a 0-1 integer mathematical programming model. In this biobjective formulation, one of the objectives is taken as the expected makespan minimization and the other is taken as the expected cost minimization. As the solution approach to this biobjective formulation genetic algorithm (GA) is chosen. After carefully invest...

  15. Evolution of Strategies for "Prisoner's Dilemma" using Genetic Algorithm

    OpenAIRE

    Heinz, Jan

    2010-01-01

    The subject of this thesis is the software application "Prisoner's Dilemma". The program creates a population of players of "Prisoner's Dilemma", has them play against each other, and - based on their results - performs an evolution of their strategies by means of a genetic algorithm (selection, mutation, and crossover). The program was written in Microsoft Visual Studio, in the C++ programming language, and its interface makes use of the .NET Framework. The thesis includes examples of strate...

  16. Optimization of heat pump using fuzzy logic and genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Sahin, Arzu Sencan [Sueleyman Demirel University, Technology Faculty, Isparta (Turkey); Kilic, Bayram; Kilic, Ulas [Bucak Emin Guelmez Vocational School, Mehmet Akif Ersoy University, Bucak (Turkey)

    2011-12-15

    Heat pumps offer economical alternatives of recovering heat from different sources for use in various industrial, commercial and residential applications. In this study, single-stage air-source vapor compression heat pump system has been optimized using genetic algorithm (GA) and fuzzy logic (FL). The necessary thermodynamic properties for optimization were calculated by FL. Thermodynamic properties obtained with FL were compared with actual results. Then, the optimum working conditions of heat pump system were determined by the GA. (orig.)

  17. Eddy current testing probe optimization using a parallel genetic algorithm

    Directory of Open Access Journals (Sweden)

    Dolapchiev Ivaylo

    2008-01-01

    Full Text Available This paper uses the developed parallel version of Michalewicz's Genocop III Genetic Algorithm (GA searching technique to optimize the coil geometry of an eddy current non-destructive testing probe (ECTP. The electromagnetic field is computed using FEMM 2D finite element code. The aim of this optimization was to determine coil dimensions and positions that improve ECTP sensitivity to physical properties of the tested devices.

  18. MICRONEEDLE STRUCTURE DESIGN AND OPTIMIZATION USING GENETIC ALGORITHM

    OpenAIRE

    N. A. ISMAIL; S. C. NEOH; N. SABANI; B. N. TAIB

    2015-01-01

    This paper presents a Genetic Algorithm (GA) based microneedle design and analysis. GA is an evolutionary optimization technique that mimics the natural biological evolution. The design of microneedle structure considers the shape of microneedle, material used, size of the array, the base of microneedle, the lumen base, the height of microneedle, the height of the lumen, and the height of the drug container or reservoir. The GA is executed in conjunction with ANSYS simulation system to assess...

  19. Use of genetic algorithms in operations management. Part II - Results.

    OpenAIRE

    Stockton, David; Quinn, L. (Liam); Khalil, R. A. (Riham A.)

    2004-01-01

    The insight gained into the relationship between genetic algorithm (GA) structure and optimisation performance, through the research reported in this paper, provided the knowledge to integrate GAs with discrete event simulation which formed the output from IMI EPSRC Project GR/N05871 ‘Responsive Design and Operation of Flexible Machining Lines’ rated by EPSRC as “Tending to Internationally Leading” where industrial partners included , Unipart Group Ltd and Nigel.Shir...

  20. Optimising training data for ANNs with Genetic Algorithms

    OpenAIRE

    Kamp , R. G.; Savenije , H. H. G.

    2006-01-01

    International audience; Artificial Neural Networks (ANNs) have proved to be good modelling tools in hydrology for rainfall-runoff modelling and hydraulic flow modelling. Representative datasets are necessary for the training phase in which the ANN learns the model's input-output relations. Good and representative training data is not always available. In this publication Genetic Algorithms (GA) are used to optimise training datasets. The approach is tested with an existing hydraulic model in ...

  1. Optimising training data for ANNs with Genetic Algorithms

    OpenAIRE

    R. G. Kamp; R. G. Kamp; H. H. G. Savenije

    2006-01-01

    Artificial Neural Networks (ANNs) have proved to be good modelling tools in hydrology for rainfall-runoff modelling and hydraulic flow modelling. Representative datasets are necessary for the training phase in which the ANN learns the model's input-output relations. Good and representative training data is not always available. In this publication Genetic Algorithms (GA) are used to optimise training datasets. The approach is tested with an existing hydraulic model in The Netherlands. An...

  2. Optimization of broadband semiconductor chirped mirrors with genetic algorithm

    OpenAIRE

    Dems, M.; Wnuk, P.; Wasylczyk, P.; Zinkiewicz, L.; Wojcik-Jedlinska, A.; Reginski, K.; Hejduk, K.; Jasik, A.

    2016-01-01

    Genetic algorithm was applied for optimization of dispersion properties in semiconductor Bragg reflectors for applications in femtosecond lasers. Broadband, large negative group-delay dispersion was achieved in the optimized design: The group-delay dispersion (GDD) as large as −3500 fs2 was theoretically obtained over a 10-nm bandwidth. The designed structure was manufactured and tested, providing GDD −3320 fs2 over a 7-nm bandwidth. The mirror performance was ...

  3. Approximate k-NN delta test minimization method using genetic algorithms: Application to time series

    CERN Document Server

    Mateo, F; Gadea, Rafael; Sovilj, Dusan

    2010-01-01

    In many real world problems, the existence of irrelevant input variables (features) hinders the predictive quality of the models used to estimate the output variables. In particular, time series prediction often involves building large regressors of artificial variables that can contain irrelevant or misleading information. Many techniques have arisen to confront the problem of accurate variable selection, including both local and global search strategies. This paper presents a method based on genetic algorithms that intends to find a global optimum set of input variables that minimize the Delta Test criterion. The execution speed has been enhanced by substituting the exact nearest neighbor computation by its approximate version. The problems of scaling and projection of variables have been addressed. The developed method works in conjunction with MATLAB's Genetic Algorithm and Direct Search Toolbox. The goodness of the proposed methodology has been evaluated on several popular time series examples, and also ...

  4. Springback optimization in automotive Shock Absorber Cup with Genetic Algorithm

    Science.gov (United States)

    Kakandikar, Ganesh; Nandedkar, Vilas

    2018-02-01

    Drawing or forming is a process normally used to achieve a required component form from a metal blank by applying a punch which radially draws the blank into the die by a mechanical or hydraulic action or combining both. When the component is drawn for more depth than the diameter, it is usually seen as deep drawing, which involves complicated states of material deformation. Due to the radial drawing of the material as it enters the die, radial drawing stress occurs in the flange with existence of the tangential compressive stress. This compression generates wrinkles in the flange. Wrinkling is unwanted phenomenon and can be controlled by application of a blank-holding force. Tensile stresses cause thinning in the wall region of the cup. Three main types of the errors occur in such a process are wrinkling, fracturing and springback. This paper reports a work focused on the springback and control. Due to complexity of the process, tool try-outs and experimentation may be costly, bulky and time consuming. Numerical simulation proves to be a good option for studying the process and developing a control strategy for reducing the springback. Finite-element based simulations have been used popularly for such purposes. In this study, the springback in deep drawing of an automotive Shock Absorber Cup is simulated with finite element method. Taguchi design of experiments and analysis of variance are used to analyze the influencing process parameters on the springback. Mathematical relations are developed to relate the process parameters and the resulting springback. The optimization problem is formulated for the springback, referring to the displacement magnitude in the selected sections. Genetic Algorithm is then applied for process optimization with an objective to minimize the springback. The results indicate that a better prediction of the springback and process optimization could be achieved with a combined use of these methods and tools.

  5. Dynamic characterization of oil fields, complex stratigraphically using genetic algorithms

    International Nuclear Information System (INIS)

    Gonzalez, Santiago; Hidrobo, Eduardo A

    2004-01-01

    A novel methodology is presented in this paper for the characterization of highly heterogeneous oil fields by integration of the oil fields dynamic information to the static updated model. The objective of the oil field's characterization process is to build an oil field model, as realistic as possible, through the incorporation of all the available information. The classical approach consists in producing a model based in the oil field's static information, having as the process final stage the validation model with the dynamic information available. It is important to clarify that the term validation implies a punctual process by nature, generally intended to secure the required coherence between productive zones and petrophysical properties. The objective of the proposed methodology is to enhance the prediction capacity of the oil field's model by previously integrating, parameters inherent to the oil field's fluid dynamics by a process of dynamic data inversion through an optimization procedure based on evolutionary computation. The proposed methodology relies on the construction of the oil field's high-resolution static model, escalated by means of hybrid techniques while aiming to preserve the oil field's heterogeneity. Afterwards, using an analytic simulator as reference, the scaled model is methodically modified by means of an optimization process that uses genetic algorithms and production data as conditional information. The process's final product is a model that observes the static and dynamic conditions of the oil field with the capacity to minimize the economic impact that generates production historical adjustments to the simulation tasks. This final model features some petrophysical properties (porosity, permeability and water saturation), as modified to achieve a better adjustment of the simulated production's history versus the real one history matching. Additionally, the process involves a slight modification of relative permeability, which has

  6. MAC Protocol for Ad Hoc Networks Using a Genetic Algorithm

    Science.gov (United States)

    Elizarraras, Omar; Panduro, Marco; Méndez, Aldo L.

    2014-01-01

    The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR) and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC) protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access) for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15%) compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput. PMID:25140339

  7. MAC Protocol for Ad Hoc Networks Using a Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Omar Elizarraras

    2014-01-01

    Full Text Available The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15% compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput.

  8. Genetic Algorithm Optimizes Q-LAW Control Parameters

    Science.gov (United States)

    Lee, Seungwon; von Allmen, Paul; Petropoulos, Anastassios; Terrile, Richard

    2008-01-01

    A document discusses a multi-objective, genetic algorithm designed to optimize Lyapunov feedback control law (Q-law) parameters in order to efficiently find Pareto-optimal solutions for low-thrust trajectories for electronic propulsion systems. These would be propellant-optimal solutions for a given flight time, or flight time optimal solutions for a given propellant requirement. The approximate solutions are used as good initial solutions for high-fidelity optimization tools. When the good initial solutions are used, the high-fidelity optimization tools quickly converge to a locally optimal solution near the initial solution. Q-law control parameters are represented as real-valued genes in the genetic algorithm. The performances of the Q-law control parameters are evaluated in the multi-objective space (flight time vs. propellant mass) and sorted by the non-dominated sorting method that assigns a better fitness value to the solutions that are dominated by a fewer number of other solutions. With the ranking result, the genetic algorithm encourages the solutions with higher fitness values to participate in the reproduction process, improving the solutions in the evolution process. The population of solutions converges to the Pareto front that is permitted within the Q-law control parameter space.

  9. Design of PID Controller Simulator based on Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Fahri VATANSEVER

    2013-08-01

    Full Text Available PID (Proportional Integral and Derivative controllers take an important place in the field of system controlling. Various methods such as Ziegler-Nichols, Cohen-Coon, Chien Hrones Reswick (CHR and Wang-Juang-Chan are available for the design of such controllers benefiting from the system time and frequency domain data. These controllers are in compliance with system properties under certain criteria suitable to the system. Genetic algorithms have become widely used in control system applications in parallel to the advances in the field of computer and artificial intelligence. In this study, PID controller designs have been carried out by means of classical methods and genetic algorithms and comparative results have been analyzed. For this purpose, a graphical user interface program which can be used for educational purpose has been developed. For the definite (entered transfer functions, the suitable P, PI and PID controller coefficients have calculated by both classical methods and genetic algorithms and many parameters and responses of the systems have been compared and presented numerically and graphically

  10. Genetic algorithm based optimization of advanced solar cell designs modeled in Silvaco AtlasTM

    OpenAIRE

    Utsler, James

    2006-01-01

    A genetic algorithm was used to optimize the power output of multi-junction solar cells. Solar cell operation was modeled using the Silvaco ATLASTM software. The output of the ATLASTM simulation runs served as the input to the genetic algorithm. The genetic algorithm was run as a diffusing computation on a network of eighteen dual processor nodes. Results showed that the genetic algorithm produced better power output optimizations when compared with the results obtained using the hill cli...

  11. RCQ-GA: RDF Chain Query Optimization Using Genetic Algorithms

    Science.gov (United States)

    Hogenboom, Alexander; Milea, Viorel; Frasincar, Flavius; Kaymak, Uzay

    The application of Semantic Web technologies in an Electronic Commerce environment implies a need for good support tools. Fast query engines are needed for efficient querying of large amounts of data, usually represented using RDF. We focus on optimizing a special class of SPARQL queries, the so-called RDF chain queries. For this purpose, we devise a genetic algorithm called RCQ-GA that determines the order in which joins need to be performed for an efficient evaluation of RDF chain queries. The approach is benchmarked against a two-phase optimization algorithm, previously proposed in literature. The more complex a query is, the more RCQ-GA outperforms the benchmark in solution quality, execution time needed, and consistency of solution quality. When the algorithms are constrained by a time limit, the overall performance of RCQ-GA compared to the benchmark further improves.

  12. A Heuristics Approach for Classroom Scheduling Using Genetic Algorithm Technique

    Science.gov (United States)

    Ahmad, Izah R.; Sufahani, Suliadi; Ali, Maselan; Razali, Siti N. A. M.

    2018-04-01

    Reshuffling and arranging classroom based on the capacity of the audience, complete facilities, lecturing time and many more may lead to a complexity of classroom scheduling. While trying to enhance the productivity in classroom planning, this paper proposes a heuristic approach for timetabling optimization. A new algorithm was produced to take care of the timetabling problem in a university. The proposed of heuristics approach will prompt a superior utilization of the accessible classroom space for a given time table of courses at the university. Genetic Algorithm through Java programming languages were used in this study and aims at reducing the conflicts and optimizes the fitness. The algorithm considered the quantity of students in each class, class time, class size, time accessibility in each class and lecturer who in charge of the classes.

  13. An Efficient Inductive Genetic Learning Algorithm for Fuzzy Relational Rules

    Directory of Open Access Journals (Sweden)

    Antonio

    2012-04-01

    Full Text Available Fuzzy modelling research has traditionally focused on certain types of fuzzy rules. However, the use of alternative rule models could improve the ability of fuzzy systems to represent a specific problem. In this proposal, an extended fuzzy rule model, that can include relations between variables in the antecedent of rules is presented. Furthermore, a learning algorithm based on the iterative genetic approach which is able to represent the knowledge using this model is proposed as well. On the other hand, potential relations among initial variables imply an exponential growth in the feasible rule search space. Consequently, two filters for detecting relevant potential relations are added to the learning algorithm. These filters allows to decrease the search space complexity and increase the algorithm efficiency. Finally, we also present an experimental study to demonstrate the benefits of using fuzzy relational rules.

  14. An Airborne Conflict Resolution Approach Using a Genetic Algorithm

    Science.gov (United States)

    Mondoloni, Stephane; Conway, Sheila

    2001-01-01

    An airborne conflict resolution approach is presented that is capable of providing flight plans forecast to be conflict-free with both area and traffic hazards. This approach is capable of meeting constraints on the flight plan such as required times of arrival (RTA) at a fix. The conflict resolution algorithm is based upon a genetic algorithm, and can thus seek conflict-free flight plans meeting broader flight planning objectives such as minimum time, fuel or total cost. The method has been applied to conflicts occurring 6 to 25 minutes in the future in climb, cruise and descent phases of flight. The conflict resolution approach separates the detection, trajectory generation and flight rules function from the resolution algorithm. The method is capable of supporting pilot-constructed resolutions, cooperative and non-cooperative maneuvers, and also providing conflict resolution on trajectories forecast by an onboard FMC.

  15. A cluster analysis on road traffic accidents using genetic algorithms

    Science.gov (United States)

    Saharan, Sabariah; Baragona, Roberto

    2017-04-01

    The analysis of traffic road accidents is increasingly important because of the accidents cost and public road safety. The availability or large data sets makes the study of factors that affect the frequency and severity accidents are viable. However, the data are often highly unbalanced and overlapped. We deal with the data set of the road traffic accidents recorded in Christchurch, New Zealand, from 2000-2009 with a total of 26440 accidents. The data is in a binary set and there are 50 factors road traffic accidents with four level of severity. We used genetic algorithm for the analysis because we are in the presence of a large unbalanced data set and standard clustering like k-means algorithm may not be suitable for the task. The genetic algorithm based on clustering for unknown K, (GCUK) has been used to identify the factors associated with accidents of different levels of severity. The results provided us with an interesting insight into the relationship between factors and accidents severity level and suggest that the two main factors that contributes to fatal accidents are "Speed greater than 60 km h" and "Did not see other people until it was too late". A comparison with the k-means algorithm and the independent component analysis is performed to validate the results.

  16. Optimization-Based Image Segmentation by Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Rosenberger C

    2008-01-01

    Full Text Available Abstract Many works in the literature focus on the definition of evaluation metrics and criteria that enable to quantify the performance of an image processing algorithm. These evaluation criteria can be used to define new image processing algorithms by optimizing them. In this paper, we propose a general scheme to segment images by a genetic algorithm. The developed method uses an evaluation criterion which quantifies the quality of an image segmentation result. The proposed segmentation method can integrate a local ground truth when it is available in order to set the desired level of precision of the final result. A genetic algorithm is then used in order to determine the best combination of information extracted by the selected criterion. Then, we show that this approach can either be applied for gray-levels or multicomponents images in a supervised context or in an unsupervised one. Last, we show the efficiency of the proposed method through some experimental results on several gray-levels and multicomponents images.

  17. Optimization-Based Image Segmentation by Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    H. Laurent

    2008-05-01

    Full Text Available Many works in the literature focus on the definition of evaluation metrics and criteria that enable to quantify the performance of an image processing algorithm. These evaluation criteria can be used to define new image processing algorithms by optimizing them. In this paper, we propose a general scheme to segment images by a genetic algorithm. The developed method uses an evaluation criterion which quantifies the quality of an image segmentation result. The proposed segmentation method can integrate a local ground truth when it is available in order to set the desired level of precision of the final result. A genetic algorithm is then used in order to determine the best combination of information extracted by the selected criterion. Then, we show that this approach can either be applied for gray-levels or multicomponents images in a supervised context or in an unsupervised one. Last, we show the efficiency of the proposed method through some experimental results on several gray-levels and multicomponents images.

  18. An Improved Algorithm for Predicting Free Recalls

    Science.gov (United States)

    Laming, Donald

    2008-01-01

    Laming [Laming, D. (2006). "Predicting free recalls." "Journal of Experimental Psychology: Learning, Memory, and Cognition," 32, 1146-1163] has shown that, in a free-recall experiment in which the participants rehearsed out loud, entire sequences of recalls could be predicted, to a useful degree of precision, from the prior sequences of stimuli…

  19. APPLICATION OF GENETIC ALGORITHMS FOR ROBUST PARAMETER OPTIMIZATION

    Directory of Open Access Journals (Sweden)

    N. Belavendram

    2010-12-01

    Full Text Available Parameter optimization can be achieved by many methods such as Monte-Carlo, full, and fractional factorial designs. Genetic algorithms (GA are fairly recent in this respect but afford a novel method of parameter optimization. In GA, there is an initial pool of individuals each with its own specific phenotypic trait expressed as a ‘genetic chromosome’. Different genes enable individuals with different fitness levels to reproduce according to natural reproductive gene theory. This reproduction is established in terms of selection, crossover and mutation of reproducing genes. The resulting child generation of individuals has a better fitness level akin to natural selection, namely evolution. Populations evolve towards the fittest individuals. Such a mechanism has a parallel application in parameter optimization. Factors in a parameter design can be expressed as a genetic analogue in a pool of sub-optimal random solutions. Allowing this pool of sub-optimal solutions to evolve over several generations produces fitter generations converging to a pre-defined engineering optimum. In this paper, a genetic algorithm is used to study a seven factor non-linear equation for a Wheatstone bridge as the equation to be optimized. A comparison of the full factorial design against a GA method shows that the GA method is about 1200 times faster in finding a comparable solution.

  20. Application of mapping crossover genetic algorithm in nuclear power equipment optimization design

    International Nuclear Information System (INIS)

    Li Guijiang; Yan Changqi; Wang Jianjun; Liu Chengyang

    2013-01-01

    Genetic algorithm (GA) has been widely applied in nuclear engineering. An improved method, named the mapping crossover genetic algorithm (MCGA), was developed aiming at improving the shortcomings of traditional genetic algorithm (TGA). The optimal results of benchmark problems show that MCGA has better optimizing performance than TGA. MCGA was applied to the reactor coolant pump optimization design. (authors)

  1. MHC Class II epitope predictive algorithms

    DEFF Research Database (Denmark)

    Nielsen, Morten; Lund, Ole; Buus, S

    2010-01-01

    Major histocompatibility complex class II (MHC-II) molecules sample peptides from the extracellular space, allowing the immune system to detect the presence of foreign microbes from this compartment. To be able to predict the immune response to given pathogens, a number of methods have been...... developed to predict peptide-MHC binding. However, few methods other than the pioneering TEPITOPE/ProPred method have been developed for MHC-II. Despite recent progress in method development, the predictive performance for MHC-II remains significantly lower than what can be obtained for MHC-I. One reason...

  2. Swarm, genetic and evolutionary programming algorithms applied to multiuser detection

    Directory of Open Access Journals (Sweden)

    Paul Jean Etienne Jeszensky

    2005-02-01

    Full Text Available In this paper, the particles swarm optimization technique, recently published in the literature, and applied to Direct Sequence/Code Division Multiple Access systems (DS/CDMA with multiuser detection (MuD is analyzed, evaluated and compared. The Swarm algorithm efficiency when applied to the DS-CDMA multiuser detection (Swarm-MuD is compared through the tradeoff performance versus computational complexity, being the complexity expressed in terms of the number of necessary operations in order to reach the performance obtained through the optimum detector or the Maximum Likelihood detector (ML. The comparison is accomplished among the genetic algorithm, evolutionary programming with cloning and Swarm algorithm under the same simulation basis. Additionally, it is proposed an heuristics-MuD complexity analysis through the number of computational operations. Finally, an analysis is carried out for the input parameters of the Swarm algorithm in the attempt to find the optimum parameters (or almost-optimum for the algorithm applied to the MuD problem.

  3. Using Genetic Algorithms for Navigation Planning in Dynamic Environments

    Directory of Open Access Journals (Sweden)

    Ferhat Uçan

    2012-01-01

    Full Text Available Navigation planning can be considered as a combination of searching and executing the most convenient flight path from an initial waypoint to a destination waypoint. Generally the aim is to follow the flight path, which provides minimum fuel consumption for the air vehicle. For dynamic environments, constraints change dynamically during flight. This is a special case of dynamic path planning. As the main concern of this paper is flight planning, the conditions and objectives that are most probable to be used in navigation problem are considered. In this paper, the genetic algorithm solution of the dynamic flight planning problem is explained. The evolutionary dynamic navigation planning algorithm is developed for compensating the existing deficiencies of the other approaches. The existing fully dynamic algorithms process unit changes to topology one modification at a time, but when there are several such operations occurring in the environment simultaneously, the algorithms are quite inefficient. The proposed algorithm may respond to the concurrent constraint updates in a shorter time for dynamic environment. The most secure navigation of the air vehicle is planned and executed so that the fuel consumption is minimum.

  4. A Parallel Genetic Algorithm for Automated Electronic Circuit Design

    Science.gov (United States)

    Long, Jason D.; Colombano, Silvano P.; Haith, Gary L.; Stassinopoulos, Dimitris

    2000-01-01

    Parallelized versions of genetic algorithms (GAs) are popular primarily for three reasons: the GA is an inherently parallel algorithm, typical GA applications are very compute intensive, and powerful computing platforms, especially Beowulf-style computing clusters, are becoming more affordable and easier to implement. In addition, the low communication bandwidth required allows the use of inexpensive networking hardware such as standard office ethernet. In this paper we describe a parallel GA and its use in automated high-level circuit design. Genetic algorithms are a type of trial-and-error search technique that are guided by principles of Darwinian evolution. Just as the genetic material of two living organisms can intermix to produce offspring that are better adapted to their environment, GAs expose genetic material, frequently strings of 1s and Os, to the forces of artificial evolution: selection, mutation, recombination, etc. GAs start with a pool of randomly-generated candidate solutions which are then tested and scored with respect to their utility. Solutions are then bred by probabilistically selecting high quality parents and recombining their genetic representations to produce offspring solutions. Offspring are typically subjected to a small amount of random mutation. After a pool of offspring is produced, this process iterates until a satisfactory solution is found or an iteration limit is reached. Genetic algorithms have been applied to a wide variety of problems in many fields, including chemistry, biology, and many engineering disciplines. There are many styles of parallelism used in implementing parallel GAs. One such method is called the master-slave or processor farm approach. In this technique, slave nodes are used solely to compute fitness evaluations (the most time consuming part). The master processor collects fitness scores from the nodes and performs the genetic operators (selection, reproduction, variation, etc.). Because of dependency

  5. Segment-based dose optimization using a genetic algorithm

    International Nuclear Information System (INIS)

    Cotrutz, Cristian; Xing Lei

    2003-01-01

    Intensity modulated radiation therapy (IMRT) inverse planning is conventionally done in two steps. Firstly, the intensity maps of the treatment beams are optimized using a dose optimization algorithm. Each of them is then decomposed into a number of segments using a leaf-sequencing algorithm for delivery. An alternative approach is to pre-assign a fixed number of field apertures and optimize directly the shapes and weights of the apertures. While the latter approach has the advantage of eliminating the leaf-sequencing step, the optimization of aperture shapes is less straightforward than that of beamlet-based optimization because of the complex dependence of the dose on the field shapes, and their weights. In this work we report a genetic algorithm for segment-based optimization. Different from a gradient iterative approach or simulated annealing, the algorithm finds the optimum solution from a population of candidate plans. In this technique, each solution is encoded using three chromosomes: one for the position of the left-bank leaves of each segment, the second for the position of the right-bank and the third for the weights of the segments defined by the first two chromosomes. The convergence towards the optimum is realized by crossover and mutation operators that ensure proper exchange of information between the three chromosomes of all the solutions in the population. The algorithm is applied to a phantom and a prostate case and the results are compared with those obtained using beamlet-based optimization. The main conclusion drawn from this study is that the genetic optimization of segment shapes and weights can produce highly conformal dose distribution. In addition, our study also confirms previous findings that fewer segments are generally needed to generate plans that are comparable with the plans obtained using beamlet-based optimization. Thus the technique may have useful applications in facilitating IMRT treatment planning

  6. Optimization of tokamak plasma equilibrium shape using parallel genetic algorithms

    International Nuclear Information System (INIS)

    Zhulin An; Bin Wu; Lijian Qiu

    2006-01-01

    In the device of non-circular cross sectional tokamaks, the plasma equilibrium shape has a strong influence on the confinement and MHD stability. The plasma equilibrium shape is determined by the configuration of the poloidal field (PF) system. Usually there are many PF systems that could support the specified plasma equilibrium, the differences are the number of coils used, their positions, sizes and currents. It is necessary to find the optimal choice that meets the engineering constrains, which is often done by a constrained optimization. The Genetic Algorithms (GAs) based method has been used to solve the problem of the optimization, but the time complexity limits the algorithms to become widely used. Due to the large search space that the optimization has, it takes several hours to get a nice result. The inherent parallelism in GAs can be exploited to enhance their search efficiency. In this paper, we introduce a parallel genetic algorithms (PGAs) based approach which can reduce the computational time. The algorithm has a master-slave structure, the slave explore the search space separately and return the results to the master. A program is also developed, and it can be running on any computers which support massage passing interface. Both the algorithm and the program are detailed discussed in the paper. We also include an application that uses the program to determine the positions and currents of PF coils in EAST. The program reach the target value within half an hour and yield a speedup rate of 5.21 on 8 CPUs. (author)

  7. Appendix F. Developmental enforcement algorithm definition document : predictive braking enforcement algorithm definition document.

    Science.gov (United States)

    2012-05-01

    The purpose of this document is to fully define and describe the logic flow and mathematical equations for a predictive braking enforcement algorithm intended for implementation in a Positive Train Control (PTC) system.

  8. Predicting Students’ Performance using Modified ID3 Algorithm

    OpenAIRE

    Ramanathan L; Saksham Dhanda; Suresh Kumar D

    2013-01-01

    The ability to predict performance of students is very crucial in our present education system. We can use data mining concepts for this purpose. ID3 algorithm is one of the famous algorithms present today to generate decision trees. But this algorithm has a shortcoming that it is inclined to attributes with many values. So , this research aims to overcome this shortcoming of the algorithm by using gain ratio(instead of information gain) as well as by giving weights to each attribute at every...

  9. Dynamic Algorithm for LQGPC Predictive Control

    DEFF Research Database (Denmark)

    Hangstrup, M.; Ordys, A.W.; Grimble, M.J.

    1998-01-01

    In this paper the optimal control law is derived for a multi-variable state space Linear Quadratic Gaussian Predictive Controller (LQGPC). A dynamic performance index is utilized resulting in an optimal steady state controller. Knowledge of future reference values is incorporated into the control......In this paper the optimal control law is derived for a multi-variable state space Linear Quadratic Gaussian Predictive Controller (LQGPC). A dynamic performance index is utilized resulting in an optimal steady state controller. Knowledge of future reference values is incorporated...... into the controller design and the solution is derived using the method of Lagrange multipliers. It is shown how well-known GPC controller can be obtained as a special case of the LQGPC controller design. The important advantage of using the LQGPC framework for designing predictive, e.g. GPS is that LQGPC enables...

  10. Computationally efficient model predictive control algorithms a neural network approach

    CERN Document Server

    Ławryńczuk, Maciej

    2014-01-01

    This book thoroughly discusses computationally efficient (suboptimal) Model Predictive Control (MPC) techniques based on neural models. The subjects treated include: ·         A few types of suboptimal MPC algorithms in which a linear approximation of the model or of the predicted trajectory is successively calculated on-line and used for prediction. ·         Implementation details of the MPC algorithms for feedforward perceptron neural models, neural Hammerstein models, neural Wiener models and state-space neural models. ·         The MPC algorithms based on neural multi-models (inspired by the idea of predictive control). ·         The MPC algorithms with neural approximation with no on-line linearization. ·         The MPC algorithms with guaranteed stability and robustness. ·         Cooperation between the MPC algorithms and set-point optimization. Thanks to linearization (or neural approximation), the presented suboptimal algorithms do not require d...

  11. ROBUST-HYBRID GENETIC ALGORITHM FOR A FLOW-SHOP SCHEDULING PROBLEM (A Case Study at PT FSCM Manufacturing Indonesia

    Directory of Open Access Journals (Sweden)

    Johan Soewanda

    2007-01-01

    Full Text Available This paper discusses the application of Robust Hybrid Genetic Algorithm to solve a flow-shop scheduling problem. The proposed algorithm attempted to reach minimum makespan. PT. FSCM Manufacturing Indonesia Plant 4's case was used as a test case to evaluate the performance of the proposed algorithm. The proposed algorithm was compared to Ant Colony, Genetic-Tabu, Hybrid Genetic Algorithm, and the company's algorithm. We found that Robust Hybrid Genetic produces statistically better result than the company's, but the same as Ant Colony, Genetic-Tabu, and Hybrid Genetic. In addition, Robust Hybrid Genetic Algorithm required less computational time than Hybrid Genetic Algorithm

  12. Optimal Design of Passive Power Filters Based on Pseudo-parallel Genetic Algorithm

    Science.gov (United States)

    Li, Pei; Li, Hongbo; Gao, Nannan; Niu, Lin; Guo, Liangfeng; Pei, Ying; Zhang, Yanyan; Xu, Minmin; Chen, Kerui

    2017-05-01

    The economic costs together with filter efficiency are taken as targets to optimize the parameter of passive filter. Furthermore, the method of combining pseudo-parallel genetic algorithm with adaptive genetic algorithm is adopted in this paper. In the early stages pseudo-parallel genetic algorithm is introduced to increase the population diversity, and adaptive genetic algorithm is used in the late stages to reduce the workload. At the same time, the migration rate of pseudo-parallel genetic algorithm is improved to change with population diversity adaptively. Simulation results show that the filter designed by the proposed method has better filtering effect with lower economic cost, and can be used in engineering.

  13. Balancing Inverted Pendulum by Angle Sensing Using Fuzzy Logic Supervised PID Controller Optimized by Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Ashutosh K. AGARWAL

    2011-10-01

    Full Text Available Genetic algorithms are robust search techniques based on the principles of evolution. A genetic algorithm maintains a population of encoded solutions and guides the population towards the optimum solution. This important property of genetic algorithm is used in this paper to stabilize the Inverted pendulum system. This paper highlights the application and stability of inverted pendulum using PID controller with fuzzy logic genetic algorithm supervisor . There are a large number of well established search techniques in use within the information technology industry. We propose a method to control inverted pendulum steady state error and overshoot using genetic algorithm technique.

  14. Optimal design of link systems using successive zooming genetic algorithm

    Science.gov (United States)

    Kwon, Young-Doo; Sohn, Chang-hyun; Kwon, Soon-Bum; Lim, Jae-gyoo

    2009-07-01

    Link-systems have been around for a long time and are still used to control motion in diverse applications such as automobiles, robots and industrial machinery. This study presents a procedure involving the use of a genetic algorithm for the optimal design of single four-bar link systems and a double four-bar link system used in diesel engine. We adopted the Successive Zooming Genetic Algorithm (SZGA), which has one of the most rapid convergence rates among global search algorithms. The results are verified by experiment and the Recurdyn dynamic motion analysis package. During the optimal design of single four-bar link systems, we found in the case of identical input/output (IO) angles that the initial and final configurations show certain symmetry. For the double link system, we introduced weighting factors for the multi-objective functions, which minimize the difference between output angles, providing balanced engine performance, as well as the difference between final output angle and the desired magnitudes of final output angle. We adopted a graphical method to select a proper ratio between the weighting factors.

  15. Articulated Human Motion Tracking Using Sequential Immune Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Yi Li

    2013-01-01

    Full Text Available We formulate human motion tracking as a high-dimensional constrained optimization problem. A novel generative method is proposed for human motion tracking in the framework of evolutionary computation. The main contribution is that we introduce immune genetic algorithm (IGA for pose optimization in latent space of human motion. Firstly, we perform human motion analysis in the learnt latent space of human motion. As the latent space is low dimensional and contents the prior knowledge of human motion, it makes pose analysis more efficient and accurate. Then, in the search strategy, we apply IGA for pose optimization. Compared with genetic algorithm and other evolutionary methods, its main advantage is the ability to use the prior knowledge of human motion. We design an IGA-based method to estimate human pose from static images for initialization of motion tracking. And we propose a sequential IGA (S-IGA algorithm for motion tracking by incorporating the temporal continuity information into the traditional IGA. Experimental results on different videos of different motion types show that our IGA-based pose estimation method can be used for initialization of motion tracking. The S-IGA-based motion tracking method can achieve accurate and stable tracking of 3D human motion.

  16. Academic Training: Evolutionary Heuristic Optimization: Genetic Algorithms and Estimation of Distribution Algorithms - Lecture series

    CERN Multimedia

    Françoise Benz

    2004-01-01

    ACADEMIC TRAINING LECTURE REGULAR PROGRAMME 1, 2, 3 and 4 June From 11:00 hrs to 12:00 hrs - Main Auditorium bldg. 500 Evolutionary Heuristic Optimization: Genetic Algorithms and Estimation of Distribution Algorithms V. Robles Forcada and M. Perez Hernandez / Univ. de Madrid, Spain In the real world, there exist a huge number of problems that require getting an optimum or near-to-optimum solution. Optimization can be used to solve a lot of different problems such as network design, sets and partitions, storage and retrieval or scheduling. On the other hand, in nature, there exist many processes that seek a stable state. These processes can be seen as natural optimization processes. Over the last 30 years several attempts have been made to develop optimization algorithms, which simulate these natural optimization processes. These attempts have resulted in methods such as Simulated Annealing, based on natural annealing processes or Evolutionary Computation, based on biological evolution processes. Geneti...

  17. Academic Training: Evolutionary Heuristic Optimization: Genetic Algorithms and Estimation of Distribution Algorithms - Lecture serie

    CERN Multimedia

    Françoise Benz

    2004-01-01

    ENSEIGNEMENT ACADEMIQUE ACADEMIC TRAINING Françoise Benz 73127 academic.training@cern.ch ACADEMIC TRAINING LECTURE REGULAR PROGRAMME 1, 2, 3 and 4 June From 11:00 hrs to 12:00 hrs - Main Auditorium bldg. 500 Evolutionary Heuristic Optimization: Genetic Algorithms and Estimation of Distribution Algorithms V. Robles Forcada and M. Perez Hernandez / Univ. de Madrid, Spain In the real world, there exist a huge number of problems that require getting an optimum or near-to-optimum solution. Optimization can be used to solve a lot of different problems such as network design, sets and partitions, storage and retrieval or scheduling. On the other hand, in nature, there exist many processes that seek a stable state. These processes can be seen as natural optimization processes. Over the last 30 years several attempts have been made to develop optimization algorithms, which simulate these natural optimization processes. These attempts have resulted in methods such as Simulated Annealing, based on nat...

  18. Evaluating ortholog prediction algorithms in a yeast model clade.

    Directory of Open Access Journals (Sweden)

    Leonidas Salichos

    Full Text Available BACKGROUND: Accurate identification of orthologs is crucial for evolutionary studies and for functional annotation. Several algorithms have been developed for ortholog delineation, but so far, manually curated genome-scale biological databases of orthologous genes for algorithm evaluation have been lacking. We evaluated four popular ortholog prediction algorithms (MultiParanoid; and OrthoMCL; RBH: Reciprocal Best Hit; RSD: Reciprocal Smallest Distance; the last two extended into clustering algorithms cRBH and cRSD, respectively, so that they can predict orthologs across multiple taxa against a set of 2,723 groups of high-quality curated orthologs from 6 Saccharomycete yeasts in the Yeast Gene Order Browser. RESULTS: Examination of sensitivity [TP/(TP+FN], specificity [TN/(TN+FP], and accuracy [(TP+TN/(TP+TN+FP+FN] across a broad parameter range showed that cRBH was the most accurate and specific algorithm, whereas OrthoMCL was the most sensitive. Evaluation of the algorithms across a varying number of species showed that cRBH had the highest accuracy and lowest false discovery rate [FP/(FP+TP], followed by cRSD. Of the six species in our set, three descended from an ancestor that underwent whole genome duplication. Subsequent differential duplicate loss events in the three descendants resulted in distinct classes of gene loss patterns, including cases where the genes retained in the three descendants are paralogs, constituting 'traps' for ortholog prediction algorithms. We found that the false discovery rate of all algorithms dramatically increased in these traps. CONCLUSIONS: These results suggest that simple algorithms, like cRBH, may be better ortholog predictors than more complex ones (e.g., OrthoMCL and MultiParanoid for evolutionary and functional genomics studies where the objective is the accurate inference of single-copy orthologs (e.g., molecular phylogenetics, but that all algorithms fail to accurately predict orthologs when paralogy

  19. High-Speed General Purpose Genetic Algorithm Processor.

    Science.gov (United States)

    Hoseini Alinodehi, Seyed Pourya; Moshfe, Sajjad; Saber Zaeimian, Masoumeh; Khoei, Abdollah; Hadidi, Khairollah

    2016-07-01

    In this paper, an ultrafast steady-state genetic algorithm processor (GAP) is presented. Due to the heavy computational load of genetic algorithms (GAs), they usually take a long time to find optimum solutions. Hardware implementation is a significant approach to overcome the problem by speeding up the GAs procedure. Hence, we designed a digital CMOS implementation of GA in [Formula: see text] process. The proposed processor is not bounded to a specific application. Indeed, it is a general-purpose processor, which is capable of performing optimization in any possible application. Utilizing speed-boosting techniques, such as pipeline scheme, parallel coarse-grained processing, parallel fitness computation, parallel selection of parents, dual-population scheme, and support for pipelined fitness computation, the proposed processor significantly reduces the processing time. Furthermore, by relying on a built-in discard operator the proposed hardware may be used in constrained problems that are very common in control applications. In the proposed design, a large search space is achievable through the bit string length extension of individuals in the genetic population by connecting the 32-bit GAPs. In addition, the proposed processor supports parallel processing, in which the GAs procedure can be run on several connected processors simultaneously.

  20. Near infrared spectrometric technique for testing fruit quality: optimisation of regression models using genetic algorithms

    Science.gov (United States)

    Isingizwe Nturambirwe, J. Frédéric; Perold, Willem J.; Opara, Umezuruike L.

    2016-02-01

    Near infrared (NIR) spectroscopy has gained extensive use in quality evaluation. It is arguably one of the most advanced spectroscopic tools in non-destructive quality testing of food stuff, from measurement to data analysis and interpretation. NIR spectral data are interpreted through means often involving multivariate statistical analysis, sometimes associated with optimisation techniques for model improvement. The objective of this research was to explore the extent to which genetic algorithms (GA) can be used to enhance model development, for predicting fruit quality. Apple fruits were used, and NIR spectra in the range from 12000 to 4000 cm-1 were acquired on both bruised and healthy tissues, with different degrees of mechanical damage. GAs were used in combination with partial least squares regression methods to develop bruise severity prediction models, and compared to PLS models developed using the full NIR spectrum. A classification model was developed, which clearly separated bruised from unbruised apple tissue. GAs helped improve prediction models by over 10%, in comparison with full spectrum-based models, as evaluated in terms of error of prediction (Root Mean Square Error of Cross-validation). PLS models to predict internal quality, such as sugar content and acidity were developed and compared to the versions optimized by genetic algorithm. Overall, the results highlighted the potential use of GA method to improve speed and accuracy of fruit quality prediction.

  1. An Improved Chaos Genetic Algorithm for T-Shaped MIMO Radar Antenna Array Optimization

    Directory of Open Access Journals (Sweden)

    Xin Fu

    2014-01-01

    Full Text Available In view of the fact that the traditional genetic algorithm easily falls into local optimum in the late iterations, an improved chaos genetic algorithm employed chaos theory and genetic algorithm is presented to optimize the low side-lobe for T-shaped MIMO radar antenna array. The novel two-dimension Cat chaotic map has been put forward to produce its initial population, improving the diversity of individuals. The improved Tent map is presented for groups of individuals of a generation with chaos disturbance. Improved chaotic genetic algorithm optimization model is established. The algorithm presented in this paper not only improved the search precision, but also avoids effectively the problem of local convergence and prematurity. For MIMO radar, the improved chaos genetic algorithm proposed in this paper obtains lower side-lobe level through optimizing the exciting current amplitude. Simulation results show that the algorithm is feasible and effective. Its performance is superior to the traditional genetic algorithm.

  2. Adaptive Incremental Genetic Algorithm for Task Scheduling in Cloud Environments

    Directory of Open Access Journals (Sweden)

    Kairong Duan

    2018-05-01

    Full Text Available Cloud computing is a new commercial model that enables customers to acquire large amounts of virtual resources on demand. Resources including hardware and software can be delivered as services and measured by specific usage of storage, processing, bandwidth, etc. In Cloud computing, task scheduling is a process of mapping cloud tasks to Virtual Machines (VMs. When binding the tasks to VMs, the scheduling strategy has an important influence on the efficiency of datacenter and related energy consumption. Although many traditional scheduling algorithms have been applied in various platforms, they may not work efficiently due to the large number of user requests, the variety of computation resources and complexity of Cloud environment. In this paper, we tackle the task scheduling problem which aims to minimize makespan by Genetic Algorithm (GA. We propose an incremental GA which has adaptive probabilities of crossover and mutation. The mutation and crossover rates change according to generations and also vary between individuals. Large numbers of tasks are randomly generated to simulate various scales of task scheduling problem in Cloud environment. Based on the instance types of Amazon EC2, we implemented virtual machines with different computing capacity on CloudSim. We compared the performance of the adaptive incremental GA with that of Standard GA, Min-Min, Max-Min , Simulated Annealing and Artificial Bee Colony Algorithm in finding the optimal scheme. Experimental results show that the proposed algorithm can achieve feasible solutions which have acceptable makespan with less computation time.

  3. Optimization in optical systems revisited: Beyond genetic algorithms

    Science.gov (United States)

    Gagnon, Denis; Dumont, Joey; Dubé, Louis

    2013-05-01

    Designing integrated photonic devices such as waveguides, beam-splitters and beam-shapers often requires optimization of a cost function over a large solution space. Metaheuristics - algorithms based on empirical rules for exploring the solution space - are specifically tailored to those problems. One of the most widely used metaheuristics is the standard genetic algorithm (SGA), based on the evolution of a population of candidate solutions. However, the stochastic nature of the SGA sometimes prevents access to the optimal solution. Our goal is to show that a parallel tabu search (PTS) algorithm is more suited to optimization problems in general, and to photonics in particular. PTS is based on several search processes using a pool of diversified initial solutions. To assess the performance of both algorithms (SGA and PTS), we consider an integrated photonics design problem, the generation of arbitrary beam profiles using a two-dimensional waveguide-based dielectric structure. The authors acknowledge financial support from the Natural Sciences and Engineering Research Council of Canada (NSERC).

  4. Marine Traffic Optimization Using Petri Net and Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Anita Gudelj

    2012-11-01

    Full Text Available The paper deals with the traffic control and job optimization in the marine canal system. The moving of vessels can be described as a set of discrete events and states. Some of these states can be undesirable such as conflicts and deadlocks. It is necessary to apply adequate control policy to avoid deadlocks and blocks the vessels’ moving only in the case of dangerous situation. This paper addresses the use of Petri net as modelling and scheduling tool in this context. To find better solutions the authors propose the integration of Petri net with a genetic algorithm. Also, a matrix based formal method is proposed for analyzing discrete event dynamic system (DEDS. The algorithm is developed to deal with multi-project, multi-constrained scheduling problem with shared resources. It is verified by a computer simulation using MATLAB environment.

  5. Genetic Algorithms: A New Method for Neutron Beam Spectral Characterization

    International Nuclear Information System (INIS)

    David W. Freeman

    2000-01-01

    A revolutionary new concept for solving the neutron spectrum unfolding problem using genetic algorithms (GAs) has recently been introduced. GAs are part of a new field of evolutionary solution techniques that mimic living systems with computer-simulated chromosome solutions that mate, mutate, and evolve to create improved solutions. The original motivation for the research was to improve spectral characterization of neutron beams associated with boron neutron capture therapy (BNCT). The GA unfolding technique has been successfully applied to problems with moderate energy resolution (up to 47 energy groups). Initial research indicates that the GA unfolding technique may well be superior to popular unfolding methods in common use. Research now under way at Kansas State University is focused on optimizing the unfolding algorithm and expanding its energy resolution to unfold detailed beam spectra based on multiple foil measurements. Indications are that the final code will significantly outperform current, state-of-the-art codes in use by the scientific community

  6. Optimal Design of a Hydrogen Community by Genetic Algorithms

    International Nuclear Information System (INIS)

    Rodolfo Dufo Lopez; Jose Luis Bernal Agustin; Luis Correas Uson; Ismael Aso Aguarta

    2006-01-01

    A study was conducted for the implementation of two Hydrogen Communities, following the recommendations of the HY-COM initiative of the European Commission. The proposed communities find their place in the municipality of Sabinanigo (Aragon, Spain). Two cases are analyzed, one off-grid village house near Sabinanigo, and a house situated in the town proper. The study was carried out with the HOGA program, Hybrid Optimization by Genetic Algorithms. A description is provided for the algorithms. The off-grid study deals with a hybrid pv-wind system with hydrogen storage for AC supply to an isolated house. The urban study is related to hydrogen production by means of hybrid renewable sources available locally (photovoltaic, wind and hydro). These complement the existing industrial electrolysis processes, in order to cater for the energy requirements of a small fleet of municipal hydrogen-powered vehicles. HOGA was used to optimize both hybrid systems. Dimensioning and deployment estimations are also provided. (authors)

  7. Optimal Design of a Hydrogen Community by Genetic Algorithms

    International Nuclear Information System (INIS)

    Rodolfo Dufo Lopeza; Jose Luis Bernal Agustin; Luis Correas Uson; Ismael Aso Aguarta

    2006-01-01

    A study was conducted for the implementation of two Hydrogen Communities, following the recommendations of the HY-COM initiative of the European Commission. The proposed communities find their place in the municipality of Sabinanigo (Aragon, Spain). Two cases are analyzed, one off-grid village house near Sabinanigo, and a house situated in the town proper. The study was carried out with the HOGA program, Hybrid Optimization by Genetic Algorithms. A description is provided for the algorithms. The off-grid study deals with a hybrid PV-wind system with hydrogen storage for AC supply to an isolated house. The urban study is related to hydrogen production by means of hybrid renewable sources available locally (photovoltaic, wind and hydro). These complement the existing industrial electrolysis processes, in order to cater for the energy requirements of a small fleet of municipal hydrogen-powered vehicles. HOGA was used to optimize both hybrid systems. Dimensioning and deployment estimations are also provided. (authors)

  8. Solving “Antenna Array Thinning Problem” Using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Rajashree Jain

    2012-01-01

    Full Text Available Thinning involves reducing total number of active elements in an antenna array without causing major degradation in system performance. Dynamic thinning is the process of achieving this under real-time conditions. It is required to find a strategic subset of antenna elements for thinning so as to have its optimum performance. From a mathematical perspective this is a nonlinear, multidimensional problem with multiple objectives and many constraints. Solution for such problem cannot be obtained by classical analytical techniques. It will be required to employ some type of search algorithm which can lead to a practical solution in an optimal. The present paper discusses an approach of using genetic algorithm for array thinning. After discussing the basic concept involving antenna array, array thinning, dynamic thinning, and application methodology, simulation results of applying the technique to linear and planar arrays are presented.

  9. Application of genetic algorithms to tuning fuzzy control systems

    Science.gov (United States)

    Espy, Todd; Vombrack, Endre; Aldridge, Jack

    1993-01-01

    Real number genetic algorithms (GA) were applied for tuning fuzzy membership functions of three controller applications. The first application is our 'Fuzzy Pong' demonstration, a controller that controls a very responsive system. The performance of the automatically tuned membership functions exceeded that of manually tuned membership functions both when the algorithm started with randomly generated functions and with the best manually-tuned functions. The second GA tunes input membership functions to achieve a specified control surface. The third application is a practical one, a motor controller for a printed circuit manufacturing system. The GA alters the positions and overlaps of the membership functions to accomplish the tuning. The applications, the real number GA approach, the fitness function and population parameters, and the performance improvements achieved are discussed. Directions for further research in tuning input and output membership functions and in tuning fuzzy rules are described.

  10. A New Adaptive Hungarian Mating Scheme in Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Chanju Jung

    2016-01-01

    Full Text Available In genetic algorithms, selection or mating scheme is one of the important operations. In this paper, we suggest an adaptive mating scheme using previously suggested Hungarian mating schemes. Hungarian mating schemes consist of maximizing the sum of mating distances, minimizing the sum, and random matching. We propose an algorithm to elect one of these Hungarian mating schemes. Every mated pair of solutions has to vote for the next generation mating scheme. The distance between parents and the distance between parent and offspring are considered when they vote. Well-known combinatorial optimization problems, the traveling salesperson problem, and the graph bisection problem are used for the test bed of our method. Our adaptive strategy showed better results than not only pure and previous hybrid schemes but also existing distance-based mating schemes.

  11. Genetic algorithms for optimal design and control of adaptive structures

    CERN Document Server

    Ribeiro, R; Dias-Rodrigues, J; Vaz, M

    2000-01-01

    Future High Energy Physics experiments require the use of light and stable structures to support their most precise radiation detection elements. These large structures must be light, highly stable, stiff and radiation tolerant in an environment where external vibrations, high radiation levels, material aging, temperature and humidity gradients are not negligible. Unforeseen factors and the unknown result of the coupling of environmental conditions, together with external vibrations, may affect the position stability of the detectors and their support structures compromising their physics performance. Careful optimization of static and dynamic behavior must be an essential part of the engineering design. Genetic Algorithms ( GA) belong to the group of probabilistic algorithms, combining elements of direct and stochastic search. They are more robust than existing directed search methods with the advantage of maintaining a population of potential solutions. There is a class of optimization problems for which Ge...

  12. Diversity Controlling Genetic Algorithm for Order Acceptance and Scheduling Problem

    Directory of Open Access Journals (Sweden)

    Cheng Chen

    2014-01-01

    Full Text Available Selection and scheduling are an important topic in production systems. To tackle the order acceptance and scheduling problem on a single machine with release dates, tardiness penalty, and sequence-dependent setup times, in this paper a diversity controlling genetic algorithm (DCGA is proposed, in which a diversified population is maintained during the whole search process through survival selection considering both the fitness and the diversity of individuals. To measure the similarity between individuals, a modified Hamming distance without considering the unaccepted orders in the chromosome is adopted. The proposed DCGA was validated on 1500 benchmark instances with up to 100 orders. Compared with the state-of-the-art algorithms, the experimental results show that DCGA improves the solution quality obtained significantly, in terms of the deviation from upper bound.

  13. Model parameters estimation and sensitivity by genetic algorithms

    International Nuclear Information System (INIS)

    Marseguerra, Marzio; Zio, Enrico; Podofillini, Luca

    2003-01-01

    In this paper we illustrate the possibility of extracting qualitative information on the importance of the parameters of a model in the course of a Genetic Algorithms (GAs) optimization procedure for the estimation of such parameters. The Genetic Algorithms' search of the optimal solution is performed according to procedures that resemble those of natural selection and genetics: an initial population of alternative solutions evolves within the search space through the four fundamental operations of parent selection, crossover, replacement, and mutation. During the search, the algorithm examines a large amount of solution points which possibly carries relevant information on the underlying model characteristics. A possible utilization of this information amounts to create and update an archive with the set of best solutions found at each generation and then to analyze the evolution of the statistics of the archive along the successive generations. From this analysis one can retrieve information regarding the speed of convergence and stabilization of the different control (decision) variables of the optimization problem. In this work we analyze the evolution strategy followed by a GA in its search for the optimal solution with the aim of extracting information on the importance of the control (decision) variables of the optimization with respect to the sensitivity of the objective function. The study refers to a GA search for optimal estimates of the effective parameters in a lumped nuclear reactor model of literature. The supporting observation is that, as most optimization procedures do, the GA search evolves towards convergence in such a way to stabilize first the most important parameters of the model and later those which influence little the model outputs. In this sense, besides estimating efficiently the parameters values, the optimization approach also allows us to provide a qualitative ranking of their importance in contributing to the model output. The

  14. Heat transfer coefficient correlation for convective boiling inside plain and micro fin tubes using genetic algorithms

    International Nuclear Information System (INIS)

    Picanco, Marco Antonio Silva; Bandarra Filho, Enio Pedone; Passos, Julio Cesar

    2006-01-01

    Two-phase flow heat transfer has been exhaustively studied over recent years. However, in this field several questions remain unanswered. Heat transfer coefficient prediction related to nucleate and convective boiling have been studied using different approaches, numerical, analytical and experimental. In this work, an experimental analysis, data representation and heat transfer coefficient prediction on two-phase heat transfer on nucleate and convective boiling are presented. An empirical correlation is obtained based on genetic algorithms search engine over a dimensional analysis of the two-phase flow heat transfer problem. (author)

  15. Transitioning from Targeted to Comprehensive Mass Spectrometry Using Genetic Algorithms.

    Science.gov (United States)

    Jaffe, Jacob D; Feeney, Caitlin M; Patel, Jinal; Lu, Xiaodong; Mani, D R

    2016-11-01

    Targeted proteomic assays are becoming increasingly popular because of their robust quantitative applications enabled by internal standardization, and they can be routinely executed on high performance mass spectrometry instrumentation. However, these assays are typically limited to 100s of analytes per experiment. Considerable time and effort are often expended in obtaining and preparing samples prior to targeted analyses. It would be highly desirable to detect and quantify 1000s of analytes in such samples using comprehensive mass spectrometry techniques (e.g., SWATH and DIA) while retaining a high degree of quantitative rigor for analytes with matched internal standards. Experimentally, it is facile to port a targeted assay to a comprehensive data acquisition technique. However, data analysis challenges arise from this strategy concerning agreement of results from the targeted and comprehensive approaches. Here, we present the use of genetic algorithms to overcome these challenges in order to configure hybrid targeted/comprehensive MS assays. The genetic algorithms are used to select precursor-to-fragment transitions that maximize the agreement in quantification between the targeted and the comprehensive methods. We find that the algorithm we used provided across-the-board improvement in the quantitative agreement between the targeted assay data and the hybrid comprehensive/targeted assay that we developed, as measured by parameters of linear models fitted to the results. We also found that the algorithm could perform at least as well as an independently-trained mass spectrometrist in accomplishing this task. We hope that this approach will be a useful tool in the development of quantitative approaches for comprehensive proteomics techniques. Graphical Abstract ᅟ.

  16. Optimization of antibacterial peptides by genetic algorithms and cheminformatics

    DEFF Research Database (Denmark)

    Fjell, Christopher D.; Jenssen, Håvard; Cheung, Warren A.

    2011-01-01

    Pathogens resistant to available drug therapies are a pressing global health problem. Short, cationic peptides represent a novel class of agents that have lower rates of drug resistance than derivatives of current antibiotics. Previously, we created a software system utilizing artificial neural...... 47 of the top rated 50 peptides chosen from an in silico library of nearly 100 000 sequences. Here, we report a method of generating candidate peptide sequences using the heuristic evolutionary programming method of genetic algorithms (GA), which provided a large (19-fold) improvement...

  17. A Hybrid Genetic Algorithm for the Multiple Crossdocks Problem

    Directory of Open Access Journals (Sweden)

    Zhaowei Miao

    2012-01-01

    Full Text Available We study a multiple crossdocks problem with supplier and customer time windows, where any violation of time windows will incur a penalty cost and the flows through the crossdock are constrained by fixed transportation schedules and crossdock capacities. We prove this problem to be NP-hard in the strong sense and therefore focus on developing efficient heuristics. Based on the problem structure, we propose a hybrid genetic algorithm (HGA integrating greedy technique and variable neighborhood search method to solve the problem. Extensive experiments under different scenarios were conducted, and results show that HGA outperforms CPLEX solver, providing solutions in realistic timescales.

  18. Improvement in PWR automatic optimization reloading methods using genetic algorithm

    International Nuclear Information System (INIS)

    Levine, S.H.; Ivanov, K.; Feltus, M.

    1996-01-01

    The objective of using automatic optimized reloading methods is to provide the Nuclear Engineer with an efficient method for reloading a nuclear reactor which results in superior core configurations that minimize fuel costs. Previous methods developed by Levine et al required a large effort to develop the initial core loading using a priority loading scheme. Subsequent modifications to this core configuration were made using expert rules to produce the final core design. Improvements in this technique have been made by using a genetic algorithm to produce improved core reload designs for PWRs more efficiently (authors)

  19. Parallel genetic algorithm as a tool for nuclear reactors reload

    International Nuclear Information System (INIS)

    Santos, Darley Roberto G.; Schirru, Roberto

    1999-01-01

    This work intends to present a tool which can be used by designers in order to get better solutions, in terms of computational costs, to solve problems of nuclear reactor reloads. It is known that the project of nuclear fuel reload is a complex combinatorial one. Generally, iterative processes are the most used ones because they generate answers to satisfy all restrictions. The model presented here uses Artificial Intelligence techniques, more precisely Genetic Algorithms techniques, mixed with parallelization techniques.Test of the tool presented here were highly satisfactory, due to a considerable reduction in computational time. (author)

  20. A New Approach to Tuning Heuristic Parameters of Genetic Algorithms

    Czech Academy of Sciences Publication Activity Database

    Holeňa, Martin

    2006-01-01

    Roč. 3, č. 3 (2006), s. 562-569 ISSN 1790-0832. [AIKED'06. WSEAS International Conference on Artificial Intelligence , Knowledge Engineering and Data Bases. Madrid, 15.02.2006-17.02.2006] R&D Projects: GA ČR(CZ) GA201/05/0325; GA ČR(CZ) GA201/05/0557 Institutional research plan: CEZ:AV0Z10300504 Keywords : evolutionary optimization * genetic algorithms * heuristic parameters * parameter tuning * artificial neural networks * convergence speed * population diversity Subject RIV: IN - Informatics, Computer Science

  1. Improved Adaptive LSB Steganography Based on Chaos and Genetic Algorithm

    Science.gov (United States)

    Yu, Lifang; Zhao, Yao; Ni, Rongrong; Li, Ting

    2010-12-01

    We propose a novel steganographic method in JPEG images with high performance. Firstly, we propose improved adaptive LSB steganography, which can achieve high capacity while preserving the first-order statistics. Secondly, in order to minimize visual degradation of the stego image, we shuffle bits-order of the message based on chaos whose parameters are selected by the genetic algorithm. Shuffling message's bits-order provides us with a new way to improve the performance of steganography. Experimental results show that our method outperforms classical steganographic methods in image quality, while preserving characteristics of histogram and providing high capacity.

  2. Optimal Parameter Selection of Power System Stabilizer using Genetic Algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Chung, Hyeng Hwan; Chung, Dong Il; Chung, Mun Kyu [Dong-AUniversity (Korea); Wang, Yong Peel [Canterbury Univeristy (New Zealand)

    1999-06-01

    In this paper, it is suggested that the selection method of optimal parameter of power system stabilizer (PSS) with robustness in low frequency oscillation for power system using real variable elitism genetic algorithm (RVEGA). The optimal parameters were selected in the case of power system stabilizer with one lead compensator, and two lead compensator. Also, the frequency responses characteristics of PSS, the system eigenvalues criterion and the dynamic characteristics were considered in the normal load and the heavy load, which proved usefulness of RVEGA compare with Yu's compensator design theory. (author). 20 refs., 15 figs., 8 tabs.

  3. Introduction to the application of genetic algorithms in engineering

    Directory of Open Access Journals (Sweden)

    I. S. Shaw

    1998-07-01

    Full Text Available Genetic algorithms constitute a new research area in the field of artificial intelligence. This work is aimed at their application in specific areas of engineering where good results have already been achieved. The purpose of this work is to provide a basic introduction for students as well as experienced engineers who wish to upgrade their knowledge. A distinctive feature of artificial intelligence is that instead of mathematical models, either direct human experience or certain functions of the human brain for the modelling of physical phenomena are used.

  4. Improved Adaptive LSB Steganography Based on Chaos and Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Yu Lifang

    2010-01-01

    Full Text Available We propose a novel steganographic method in JPEG images with high performance. Firstly, we propose improved adaptive LSB steganography, which can achieve high capacity while preserving the first-order statistics. Secondly, in order to minimize visual degradation of the stego image, we shuffle bits-order of the message based on chaos whose parameters are selected by the genetic algorithm. Shuffling message's bits-order provides us with a new way to improve the performance of steganography. Experimental results show that our method outperforms classical steganographic methods in image quality, while preserving characteristics of histogram and providing high capacity.

  5. Approximate Quantum Adders with Genetic Algorithms: An IBM Quantum Experience

    Directory of Open Access Journals (Sweden)

    Li Rui

    2017-07-01

    Full Text Available It has been proven that quantum adders are forbidden by the laws of quantum mechanics. We analyze theoretical proposals for the implementation of approximate quantum adders and optimize them by means of genetic algorithms, improving previous protocols in terms of efficiency and fidelity. Furthermore, we experimentally realize a suitable approximate quantum adder with the cloud quantum computing facilities provided by IBM Quantum Experience. The development of approximate quantum adders enhances the toolbox of quantum information protocols, paving the way for novel applications in quantum technologies.

  6. Parameterization of interatomic potential by genetic algorithms: A case study

    Energy Technology Data Exchange (ETDEWEB)

    Ghosh, Partha S., E-mail: psghosh@barc.gov.in; Arya, A.; Dey, G. K. [Materials Science Division, Bhabha Atomic Research Centre, Mumbai-400085 (India); Ranawat, Y. S. [Department of Ceramic Engineering, Indian Institute of Technology (BHU), Varanasi-221005 (India)

    2015-06-24

    A framework for Genetic Algorithm based methodology is developed to systematically obtain and optimize parameters for interatomic force field functions for MD simulations by fitting to a reference data base. This methodology is applied to the fitting of ThO{sub 2} (CaF{sub 2} prototype) – a representative of ceramic based potential fuel for nuclear applications. The resulting GA optimized parameterization of ThO{sub 2} is able to capture basic structural, mechanical, thermo-physical properties and also describes defect structures within the permissible range.

  7. Improvement in PWR automatic optimization reloading methods using genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Levine, S H; Ivanov, K; Feltus, M [Pennsylvania State Univ., University Park, PA (United States)

    1996-12-01

    The objective of using automatic optimized reloading methods is to provide the Nuclear Engineer with an efficient method for reloading a nuclear reactor which results in superior core configurations that minimize fuel costs. Previous methods developed by Levine et al required a large effort to develop the initial core loading using a priority loading scheme. Subsequent modifications to this core configuration were made using expert rules to produce the final core design. Improvements in this technique have been made by using a genetic algorithm to produce improved core reload designs for PWRs more efficiently (authors).

  8. Asset management using genetic algorithm: Evidence from Tehran Stock Exchange

    Directory of Open Access Journals (Sweden)

    Abbas Sarijaloo

    2014-02-01

    Full Text Available This paper presents an empirical investigation to study the effect of market management using Markowitz theorem. The study uses the information of 50 best performers on Tehran Stock Exchange over the period 2006-2009 and, using Markowitz theorem, the efficient asset allocation are determined and the result are analyzed. The proposed model of this paper has been solved using genetic algorithm. The results indicate that Tehran Stock Exchange has managed to perform much better than average world market in most years of studies especially on year 2009. The results of our investigation have also indicated that one could reach outstanding results using GA and forming efficient portfolio.

  9. Nuclear power control system design using genetic algorithm

    International Nuclear Information System (INIS)

    Lee, Yoon Joon; Cho, Kyung Ho

    1996-01-01

    The genetic algorithm(GA) is applied to the design of the nuclear power control system. The reactor control system model is described in the LQR configuration. The LQR system order is increased to make the tracking system. The key parameters of the design are weighting matrices, and these are usually determined through numerous simulations in the conventional design. To determine the more objective and optimal weightings, the improved GA is applied. The results show that the weightings determined by the GA yield the better system responses than those obtained by the conventional design method

  10. GPGPU Implementation of a Genetic Algorithm for Stereo Refinement

    Directory of Open Access Journals (Sweden)

    Álvaro Arranz

    2015-03-01

    Full Text Available During the last decade, the general-purpose computing on graphics processing units Graphics (GPGPU has turned out to be a useful tool for speeding up many scientific calculations. Computer vision is known to be one of the fields with more penetration of these new techniques. This paper explores the advantages of using GPGPU implementation to speedup a genetic algorithm used for stereo refinement. The main contribution of this paper is analyzing which genetic operators take advantage of a parallel approach and the description of an efficient state- of-the-art implementation for each one. As a result, speed-ups close to x80 can be achieved, demonstrating to be the only way of achieving close to real-time performance.

  11. An Order Coding Genetic Algorithm to Optimize Fuel Reloads in a Nuclear Boiling Water Reactor

    International Nuclear Information System (INIS)

    Ortiz, Juan Jose; Requena, Ignacio

    2004-01-01

    A genetic algorithm is used to optimize the nuclear fuel reload for a boiling water reactor, and an order coding is proposed for the chromosomes and appropriate crossover and mutation operators. The fitness function was designed so that the genetic algorithm creates fuel reloads that, on one hand, satisfy the constrictions for the radial power peaking factor, the minimum critical power ratio, and the maximum linear heat generation rate while optimizing the effective multiplication factor at the beginning and end of the cycle. To find the values of these variables, a neural network trained with the behavior of a reactor simulator was used to predict them. The computation time is therefore greatly decreased in the search process. We validated this method with data from five cycles of the Laguna Verde Nuclear Power Plant in Mexico

  12. Research on fault diagnosis of nuclear power plants based on genetic algorithms and fuzzy logic

    International Nuclear Information System (INIS)

    Zhou Yangping; Zhao Bingquan

    2001-01-01

    Based on genetic algorithms and fuzzy logic and using expert knowledge, mini-knowledge tree model and standard signals from simulator, a new fuzzy-genetic method is developed to fault diagnosis in nuclear power plants. A new replacement method of genetic algorithms is adopted. Fuzzy logic is used to calculate the fitness of the strings in genetic algorithms. Experiments on the simulator show it can deal with the uncertainty and the fuzzy factor

  13. Empirical algorithms to predict aragonite saturation state

    Science.gov (United States)

    Turk, Daniela; Dowd, Michael

    2017-04-01

    Novel sensor packages deployed on autonomous platforms (Profiling Floats, Gliders, Moorings, SeaCycler) and biogeochemical models have a potential to increase the coverage of a key water chemistry variable, aragonite saturation state (ΩAr) in time and space, in particular in the under sampled regions of global ocean. However, these do not provide the set of inorganic carbon measurements commonly used to derive ΩAr. There is therefore a need to develop regional predictive models to determine ΩAr from measurements of commonly observed or/and non carbonate oceanic variables. Here, we investigate predictive skill of several commonly observed oceanographic variables (temperature, salinity, oxygen, nitrate, phosphate and silicate) in determining ΩAr using climatology and shipboard data. This will allow us to assess potential for autonomous sensors and biogeochemical models to monitor ΩAr regionally and globally. We apply the regression models to several time series data sets and discuss regional differences and their implications for global estimates of ΩAr.

  14. Adaptive Outlier-tolerant Exponential Smoothing Prediction Algorithms with Applications to Predict the Temperature in Spacecraft

    OpenAIRE

    Hu Shaolin; Zhang Wei; Li Ye; Fan Shunxi

    2011-01-01

    The exponential smoothing prediction algorithm is widely used in spaceflight control and in process monitoring as well as in economical prediction. There are two key conundrums which are open: one is about the selective rule of the parameter in the exponential smoothing prediction, and the other is how to improve the bad influence of outliers on prediction. In this paper a new practical outlier-tolerant algorithm is built to select adaptively proper parameter, and the exponential smoothing pr...

  15. Does genetic diversity predict health in humans?

    Directory of Open Access Journals (Sweden)

    Hanne C Lie

    2009-07-01

    Full Text Available Genetic diversity, especially at genes important for immune functioning within the Major Histocompatibility Complex (MHC, has been associated with fitness-related traits, including disease resistance, in many species. Recently, genetic diversity has been associated with mate preferences in humans. Here we asked whether these preferences are adaptive in terms of obtaining healthier mates. We investigated whether genetic diversity (heterozygosity and standardized mean d(2 at MHC and nonMHC microsatellite loci, predicted health in 153 individuals. Individuals with greater allelic diversity (d(2 at nonMHC loci and at one MHC locus, linked to HLA-DRB1, reported fewer symptoms over a four-month period than individuals with lower d(2. In contrast, there were no associations between MHC or nonMHC heterozygosity and health. NonMHC-d(2 has previously been found to predict male preferences for female faces. Thus, the current findings suggest that nonMHC diversity may play a role in both natural and sexual selection acting on human populations.

  16. The wind power prediction research based on mind evolutionary algorithm

    Science.gov (United States)

    Zhuang, Ling; Zhao, Xinjian; Ji, Tianming; Miao, Jingwen; Cui, Haina

    2018-04-01

    When the wind power is connected to the power grid, its characteristics of fluctuation, intermittent and randomness will affect the stability of the power system. The wind power prediction can guarantee the power quality and reduce the operating cost of power system. There were some limitations in several traditional wind power prediction methods. On the basis, the wind power prediction method based on Mind Evolutionary Algorithm (MEA) is put forward and a prediction model is provided. The experimental results demonstrate that MEA performs efficiently in term of the wind power prediction. The MEA method has broad prospect of engineering application.

  17. Letter to the editor: A genetic-based algorithm for personalized resistance training

    Directory of Open Access Journals (Sweden)

    A Karanikolou

    2016-12-01

    Full Text Available In a recent paper entitled “A genetic-based algorithm for personalized resistance training”, Jones et al. [1] presented an algorithm of 15 performance-associated gene polymorphisms that they propose can determine an athlete’s training response by predicting power and endurance potential. However, from the design of their studies and the data provided, there is no evidence to support these authors’ assertions. Progress towards such a significant development in the field of sport and exercise genomics will require a paradigm shift in line with recent recommendations for international collaborations such as the Athlome Project (see www.athlomeconsortium.org. Large-scale initiatives, involving numerous multi-centre and well-phenotyped exercise training and elite performance cohorts, will be necessary before attempting to derive and replicate training and/or performance algorithms.

  18. Generation of Compliant Mechanisms using Hybrid Genetic Algorithm

    Science.gov (United States)

    Sharma, D.; Deb, K.

    2014-10-01

    Compliant mechanism is a single piece elastic structure which can deform to perform the assigned task. In this work, compliant mechanisms are evolved using a constraint based bi-objective optimization formulation which requires one user defined parameter ( η). This user defined parameter limits a gap between a desired path and an actual path traced by the compliant mechanism. The non-linear and discrete optimization problems are solved using the hybrid Genetic Algorithm (GA) wherein domain specific initialization, two-dimensional crossover operator and repairing techniques are adopted. A bit-wise local search method is used with elitist non-dominated sorting genetic algorithm to further refine the compliant mechanisms. Parallel computations are performed on the master-slave architecture to reduce the computation time. A parametric study is carried out for η value which suggests a range to evolve topologically different compliant mechanisms. The applied and boundary conditions to the compliant mechanisms are considered the variables that are evolved by the hybrid GA. The post-analysis of results unveils that the complaint mechanisms are always supported at unique location that can evolve the non-dominated solutions.

  19. A genetic algorithm approach to recognition and data mining

    Energy Technology Data Exchange (ETDEWEB)

    Punch, W.F.; Goodman, E.D.; Min, Pei [Michigan State Univ., East Lansing, MI (United States)] [and others

    1996-12-31

    We review here our use of genetic algorithm (GA) and genetic programming (GP) techniques to perform {open_quotes}data mining,{close_quotes} the discovery of particular/important data within large datasets, by finding optimal data classifications using known examples. Our first experiments concentrated on the use of a K-nearest neighbor algorithm in combination with a GA. The GA selected weights for each feature so as to optimize knn classification based on a linear combination of features. This combined GA-knn approach was successfully applied to both generated and real-world data. We later extended this work by substituting a GP for the GA. The GP-knn could not only optimize data classification via linear combinations of features but also determine functional relationships among the features. This allowed for improved performance and new information on important relationships among features. We review the effectiveness of the overall approach on examples from biology and compare the effectiveness of the GA and GP.

  20. Towards Merging Binary Integer Programming Techniques with Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Reza Zamani

    2017-01-01

    Full Text Available This paper presents a framework based on merging a binary integer programming technique with a genetic algorithm. The framework uses both lower and upper bounds to make the employed mathematical formulation of a problem as tight as possible. For problems whose optimal solutions cannot be obtained, precision is traded with speed through substituting the integrality constrains in a binary integer program with a penalty. In this way, instead of constraining a variable u with binary restriction, u is considered as real number between 0 and 1, with the penalty of Mu(1-u, in which M is a large number. Values not near to the boundary extremes of 0 and 1 make the component of Mu(1-u large and are expected to be avoided implicitly. The nonbinary values are then converted to priorities, and a genetic algorithm can use these priorities to fill its initial pool for producing feasible solutions. The presented framework can be applied to many combinatorial optimization problems. Here, a procedure based on this framework has been applied to a scheduling problem, and the results of computational experiments have been discussed, emphasizing the knowledge generated and inefficiencies to be circumvented with this framework in future.

  1. Online management genetic algorithms of microgrid for residential application

    International Nuclear Information System (INIS)

    Mohamed, Faisal A.; Koivo, Heikki N.

    2012-01-01

    Highlights: ► We determine the optimal Generation optimization scheme of Microgrid. ► We employ Genetic Algorithm to the environmental/economic problem of the MG. ► We captured the optimal behavior of the MG with high accuracy even with new six different cases. - Abstract: This paper proposes a generalized formulation to determine the optimal operating strategy and cost optimization scheme for a MicroGrid (MG) for residential application. Genetic Algorithm is applied to the environmental/economic problem of the MG. The proposed problem is formulated as a nonlinear constrained MO optimization problem. Prior to the optimization of the microgrid itself, models for the system components are determined using real data. The proposed cost function takes into consideration the costs of the emissions, NOx, SO 2 , and CO 2 , start up costs, as well as the operation and maintenance costs. The MG considered in this paper consists of a wind turbine, a microturbine, a diesel generator, a photovoltaic array, a fuel cell, and a battery storage. The optimization is aimed at minimizing the cost function of the system while constraining it to meet the costumer demand and safety of the system. We also add a daily income and outgo from sale or purchased power. The results demonstrate the efficiency of the proposed approach to satisfy the load and to reduce the cost and the emissions. The comparison with other techniques demonstrates the superiority of the proposed approach and confirms its potential to solve the problem.

  2. ROAD DETECTION BY NEURAL AND GENETIC ALGORITHM IN URBAN ENVIRONMENT

    Directory of Open Access Journals (Sweden)

    A. Barsi

    2012-07-01

    Full Text Available In the urban object detection challenge organized by the ISPRS WG III/4 high geometric and radiometric resolution aerial images about Vaihingen/Stuttgart, Germany are distributed. The acquired data set contains optical false color, near infrared images and airborne laserscanning data. The presented research focused exclusively on the optical image, so the elevation information was ignored. The road detection procedure has been built up of two main phases: a segmentation done by neural networks and a compilation made by genetic algorithms. The applied neural networks were support vector machines with radial basis kernel function and self-organizing maps with hexagonal network topology and Euclidean distance function for neighborhood management. The neural techniques have been compared by hyperbox classifier, known from the statistical image classification practice. The compilation of the segmentation is realized by a novel application of the common genetic algorithm and by differential evolution technique. The genes were implemented to detect the road elements by evaluating a special binary fitness function. The results have proven that the evolutional technique can automatically find major road segments.

  3. Spatial correlation genetic algorithm for fractal image compression

    International Nuclear Information System (INIS)

    Wu, M.-S.; Teng, W.-C.; Jeng, J.-H.; Hsieh, J.-G.

    2006-01-01

    Fractal image compression explores the self-similarity property of a natural image and utilizes the partitioned iterated function system (PIFS) to encode it. This technique is of great interest both in theory and application. However, it is time-consuming in the encoding process and such drawback renders it impractical for real time applications. The time is mainly spent on the search for the best-match block in a large domain pool. In this paper, a spatial correlation genetic algorithm (SC-GA) is proposed to speed up the encoder. There are two stages for the SC-GA method. The first stage makes use of spatial correlations in images for both the domain pool and the range pool to exploit local optima. The second stage is operated on the whole image to explore more adequate similarities if the local optima are not satisfied. With the aid of spatial correlation in images, the encoding time is 1.5 times faster than that of traditional genetic algorithm method, while the quality of the retrieved image is almost the same. Moreover, about half of the matched blocks come from the correlated space, so fewer bits are required to represent the fractal transform and therefore the compression ratio is also improved

  4. Actuator Placement Via Genetic Algorithm for Aircraft Morphing

    Science.gov (United States)

    Crossley, William A.; Cook, Andrea M.

    2001-01-01

    This research continued work that began under the support of NASA Grant NAG1-2119. The focus of this effort was to continue investigations of Genetic Algorithm (GA) approaches that could be used to solve an actuator placement problem by treating this as a discrete optimization problem. In these efforts, the actuators are assumed to be "smart" devices that change the aerodynamic shape of an aircraft wing to alter the flow past the wing, and, as a result, provide aerodynamic moments that could provide flight control. The earlier work investigated issued for the problem statement, developed the appropriate actuator modeling, recognized the importance of symmetry for this problem, modified the aerodynamic analysis routine for more efficient use with the genetic algorithm, and began a problem size study to measure the impact of increasing problem complexity. The research discussed in this final summary further investigated the problem statement to provide a "combined moment" problem statement to simultaneously address roll, pitch and yaw. Investigations of problem size using this new problem statement provided insight into performance of the GA as the number of possible actuator locations increased. Where previous investigations utilized a simple wing model to develop the GA approach for actuator placement, this research culminated with application of the GA approach to a high-altitude unmanned aerial vehicle concept to demonstrate that the approach is valid for an aircraft configuration.

  5. Designing shields for KeV photons with genetic algorithms

    International Nuclear Information System (INIS)

    Asbury, Stephen; Holloway, James P.

    2011-01-01

    Shielding of x-ray sources and low energy gamma rays is often accomplished with lead aprons, comprising a thin layer (0.5 mm to 1 mm) of lead or similar high-Z material. In previous work the authors used Genetic Algorithms to explore the design of a shadow shield for space applications. Now those techniques have been applied to the problem of shielding humans from low energy gamma radiation. This paper uses a simple geometry to explore layering various materials as a method to reduce mass and dose for thin gamma shields. The genetic algorithms discover layers of materials with various Z is in fact more effective than an equivalent mass of Pb alone for lower energy gammas, but as the incident radiation energy increases the efficacy of such layering diminishes. The utility of varying Z for lower energy gammas is in part due to their complementary K-edges, where one material compensates for the transmission that would occur just below the K-edge in another material. (author)

  6. Enhanced clinical pharmacy service targeting tools: risk-predictive algorithms.

    Science.gov (United States)

    El Hajji, Feras W D; Scullin, Claire; Scott, Michael G; McElnay, James C

    2015-04-01

    This study aimed to determine the value of using a mix of clinical pharmacy data and routine hospital admission spell data in the development of predictive algorithms. Exploration of risk factors in hospitalized patients, together with the targeting strategies devised, will enable the prioritization of clinical pharmacy services to optimize patient outcomes. Predictive algorithms were developed using a number of detailed steps using a 75% sample of integrated medicines management (IMM) patients, and validated using the remaining 25%. IMM patients receive targeted clinical pharmacy input throughout their hospital stay. The algorithms were applied to the validation sample, and predicted risk probability was generated for each patient from the coefficients. Risk threshold for the algorithms were determined by identifying the cut-off points of risk scores at which the algorithm would have the highest discriminative performance. Clinical pharmacy staffing levels were obtained from the pharmacy department staffing database. Numbers of previous emergency admissions and admission medicines together with age-adjusted co-morbidity and diuretic receipt formed a 12-month post-discharge and/or readmission risk algorithm. Age-adjusted co-morbidity proved to be the best index to predict mortality. Increased numbers of clinical pharmacy staff at ward level was correlated with a reduction in risk-adjusted mortality index (RAMI). Algorithms created were valid in predicting risk of in-hospital and post-discharge mortality and risk of hospital readmission 3, 6 and 12 months post-discharge. The provision of ward-based clinical pharmacy services is a key component to reducing RAMI and enabling the full benefits of pharmacy input to patient care to be realized. © 2014 John Wiley & Sons, Ltd.

  7. A Traffic Prediction Algorithm for Street Lighting Control Efficiency

    Directory of Open Access Journals (Sweden)

    POPA Valentin

    2013-01-01

    Full Text Available This paper presents the development of a traffic prediction algorithm that can be integrated in a street lighting monitoring and control system. The prediction algorithm must enable the reduction of energy costs and improve energy efficiency by decreasing the light intensity depending on the traffic level. The algorithm analyses and processes the information received at the command center based on the traffic level at different moments. The data is collected by means of the Doppler vehicle detection sensors integrated within the system. Thus, two methods are used for the implementation of the algorithm: a neural network and a k-NN (k-Nearest Neighbor prediction algorithm. For 500 training cycles, the mean square error of the neural network is 9.766 and for 500.000 training cycles the error amounts to 0.877. In case of the k-NN algorithm the error increases from 8.24 for k=5 to 12.27 for a number of 50 neighbors. In terms of a root means square error parameter, the use of a neural network ensures the highest performance level and can be integrated in a street lighting control system.

  8. Evaluating and comparing algorithms for respiratory motion prediction

    International Nuclear Information System (INIS)

    Ernst, F; Dürichen, R; Schlaefer, A; Schweikard, A

    2013-01-01

    In robotic radiosurgery, it is necessary to compensate for systematic latencies arising from target tracking and mechanical constraints. This compensation is usually achieved by means of an algorithm which computes the future target position. In most scientific works on respiratory motion prediction, only one or two algorithms are evaluated on a limited amount of very short motion traces. The purpose of this work is to gain more insight into the real world capabilities of respiratory motion prediction methods by evaluating many algorithms on an unprecedented amount of data. We have evaluated six algorithms, the normalized least mean squares (nLMS), recursive least squares (RLS), multi-step linear methods (MULIN), wavelet-based multiscale autoregression (wLMS), extended Kalman filtering, and ε-support vector regression (SVRpred) methods, on an extensive database of 304 respiratory motion traces. The traces were collected during treatment with the CyberKnife (Accuray, Inc., Sunnyvale, CA, USA) and feature an average length of 71 min. Evaluation was done using a graphical prediction toolkit, which is available to the general public, as is the data we used. The experiments show that the nLMS algorithm—which is one of the algorithms currently used in the CyberKnife—is outperformed by all other methods. This is especially true in the case of the wLMS, the SVRpred, and the MULIN algorithms, which perform much better. The nLMS algorithm produces a relative root mean square (RMS) error of 75% or less (i.e., a reduction in error of 25% or more when compared to not doing prediction) in only 38% of the test cases, whereas the MULIN and SVRpred methods reach this level in more than 77%, the wLMS algorithm in more than 84% of the test cases. Our work shows that the wLMS algorithm is the most accurate algorithm and does not require parameter tuning, making it an ideal candidate for clinical implementation. Additionally, we have seen that the structure of a patient

  9. Optimization of Combined Thermal and Electrical Behavior of Power Converters Using Multi-Objective Genetic Algorithms

    NARCIS (Netherlands)

    Malyna, D.V.; Duarte, J.L.; Hendrix, M.A.M.; Horck, van F.B.M.

    2007-01-01

    A practical example of power electronic converter synthesis is presented, where a multi-objective genetic algorithm, namely non-dominated sorting genetic algorithm (NSGA-II) is used. The optimization algorithm takes an experimentally-derived thermal model for the converter into account. Experimental

  10. Cost optimization model and its heuristic genetic algorithms

    International Nuclear Information System (INIS)

    Liu Wei; Wang Yongqing; Guo Jilin

    1999-01-01

    Interest and escalation are large quantity in proportion to the cost of nuclear power plant construction. In order to optimize the cost, the mathematics model of cost optimization for nuclear power plant construction was proposed, which takes the maximum net present value as the optimization goal. The model is based on the activity networks of the project and is an NP problem. A heuristic genetic algorithms (HGAs) for the model was introduced. In the algorithms, a solution is represented with a string of numbers each of which denotes the priority of each activity for assigned resources. The HGAs with this encoding method can overcome the difficulty which is harder to get feasible solutions when using the traditional GAs to solve the model. The critical path of the activity networks is figured out with the concept of predecessor matrix. An example was computed with the HGAP programmed in C language. The results indicate that the model is suitable for the objectiveness, the algorithms is effective to solve the model

  11. DNA Cryptography and Deep Learning using Genetic Algorithm with NW algorithm for Key Generation.

    Science.gov (United States)

    Kalsi, Shruti; Kaur, Harleen; Chang, Victor

    2017-12-05

    Cryptography is not only a science of applying complex mathematics and logic to design strong methods to hide data called as encryption, but also to retrieve the original data back, called decryption. The purpose of cryptography is to transmit a message between a sender and receiver such that an eavesdropper is unable to comprehend it. To accomplish this, not only we need a strong algorithm, but a strong key and a strong concept for encryption and decryption process. We have introduced a concept of DNA Deep Learning Cryptography which is defined as a technique of concealing data in terms of DNA sequence and deep learning. In the cryptographic technique, each alphabet of a letter is converted into a different combination of the four bases, namely; Adenine (A), Cytosine (C), Guanine (G) and Thymine (T), which make up the human deoxyribonucleic acid (DNA). Actual implementations with the DNA don't exceed laboratory level and are expensive. To bring DNA computing on a digital level, easy and effective algorithms are proposed in this paper. In proposed work we have introduced firstly, a method and its implementation for key generation based on the theory of natural selection using Genetic Algorithm with Needleman-Wunsch (NW) algorithm and Secondly, a method for implementation of encryption and decryption based on DNA computing using biological operations Transcription, Translation, DNA Sequencing and Deep Learning.

  12. The Ship Movement Trajectory Prediction Algorithm Using Navigational Data Fusion.

    Science.gov (United States)

    Borkowski, Piotr

    2017-06-20

    It is essential for the marine navigator conducting maneuvers of his ship at sea to know future positions of himself and target ships in a specific time span to effectively solve collision situations. This article presents an algorithm of ship movement trajectory prediction, which, through data fusion, takes into account measurements of the ship's current position from a number of doubled autonomous devices. This increases the reliability and accuracy of prediction. The algorithm has been implemented in NAVDEC, a navigation decision support system and practically used on board ships.

  13. A recurrence-weighted prediction algorithm for musical analysis

    Science.gov (United States)

    Colucci, Renato; Leguizamon Cucunuba, Juan Sebastián; Lloyd, Simon

    2018-03-01

    Forecasting the future behaviour of a system using past data is an important topic. In this article we apply nonlinear time series analysis in the context of music, and present new algorithms for extending a sample of music, while maintaining characteristics similar to the original piece. By using ideas from ergodic theory, we adapt the classical prediction method of Lorenz analogues so as to take into account recurrence times, and demonstrate with examples, how the new algorithm can produce predictions with a high degree of similarity to the original sample.

  14. The Ship Movement Trajectory Prediction Algorithm Using Navigational Data Fusion

    Directory of Open Access Journals (Sweden)

    Piotr Borkowski

    2017-06-01

    Full Text Available It is essential for the marine navigator conducting maneuvers of his ship at sea to know future positions of himself and target ships in a specific time span to effectively solve collision situations. This article presents an algorithm of ship movement trajectory prediction, which, through data fusion, takes into account measurements of the ship’s current position from a number of doubled autonomous devices. This increases the reliability and accuracy of prediction. The algorithm has been implemented in NAVDEC, a navigation decision support system and practically used on board ships.

  15. Weight optimization of plane truss using genetic algorithm

    Science.gov (United States)

    Neeraja, D.; Kamireddy, Thejesh; Santosh Kumar, Potnuru; Simha Reddy, Vijay

    2017-11-01

    Optimization of structure on basis of weight has many practical benefits in every engineering field. The efficiency is proportionally related to its weight and hence weight optimization gains prime importance. Considering the field of civil engineering, weight optimized structural elements are economical and easier to transport to the site. In this study, genetic optimization algorithm for weight optimization of steel truss considering its shape, size and topology aspects has been developed in MATLAB. Material strength and Buckling stability have been adopted from IS 800-2007 code of construction steel. The constraints considered in the present study are fabrication, basic nodes, displacements, and compatibility. Genetic programming is a natural selection search technique intended to combine good solutions to a problem from many generations to improve the results. All solutions are generated randomly and represented individually by a binary string with similarities of natural chromosomes, and hence it is termed as genetic programming. The outcome of the study is a MATLAB program, which can optimise a steel truss and display the optimised topology along with element shapes, deflections, and stress results.

  16. An algorithm to discover gene signatures with predictive potential

    Directory of Open Access Journals (Sweden)

    Hallett Robin M

    2010-09-01

    Full Text Available Abstract Background The advent of global gene expression profiling has generated unprecedented insight into our molecular understanding of cancer, including breast cancer. For example, human breast cancer patients display significant diversity in terms of their survival, recurrence, metastasis as well as response to treatment. These patient outcomes can be predicted by the transcriptional programs of their individual breast tumors. Predictive gene signatures allow us to correctly classify human breast tumors into various risk groups as well as to more accurately target therapy to ensure more durable cancer treatment. Results Here we present a novel algorithm to generate gene signatures with predictive potential. The method first classifies the expression intensity for each gene as determined by global gene expression profiling as low, average or high. The matrix containing the classified data for each gene is then used to score the expression of each gene based its individual ability to predict the patient characteristic of interest. Finally, all examined genes are ranked based on their predictive ability and the most highly ranked genes are included in the master gene signature, which is then ready for use as a predictor. This method was used to accurately predict the survival outcomes in a cohort of human breast cancer patients. Conclusions We confirmed the capacity of our algorithm to generate gene signatures with bona fide predictive ability. The simplicity of our algorithm will enable biological researchers to quickly generate valuable gene signatures without specialized software or extensive bioinformatics training.

  17. Which clustering algorithm is better for predicting protein complexes?

    Directory of Open Access Journals (Sweden)

    Moschopoulos Charalampos N

    2011-12-01

    Full Text Available Abstract Background Protein-Protein interactions (PPI play a key role in determining the outcome of most cellular processes. The correct identification and characterization of protein interactions and the networks, which they comprise, is critical for understanding the molecular mechanisms within the cell. Large-scale techniques such as pull down assays and tandem affinity purification are used in order to detect protein interactions in an organism. Today, relatively new high-throughput methods like yeast two hybrid, mass spectrometry, microarrays, and phage display are also used to reveal protein interaction networks. Results In this paper we evaluated four different clustering algorithms using six different interaction datasets. We parameterized the MCL, Spectral, RNSC and Affinity Propagation algorithms and applied them to six PPI datasets produced experimentally by Yeast 2 Hybrid (Y2H and Tandem Affinity Purification (TAP methods. The predicted clusters, so called protein complexes, were then compared and benchmarked with already known complexes stored in published databases. Conclusions While results may differ upon parameterization, the MCL and RNSC algorithms seem to be more promising and more accurate at predicting PPI complexes. Moreover, they predict more complexes than other reviewed algorithms in absolute numbers. On the other hand the spectral clustering algorithm achieves the highest valid prediction rate in our experiments. However, it is nearly always outperformed by both RNSC and MCL in terms of the geometrical accuracy while it generates the fewest valid clusters than any other reviewed algorithm. This article demonstrates various metrics to evaluate the accuracy of such predictions as they are presented in the text below. Supplementary material can be found at: http://www.bioacademy.gr/bioinformatics/projects/ppireview.htm

  18. Nonlinear dynamics optimization with particle swarm and genetic algorithms for SPEAR3 emittance upgrade

    International Nuclear Information System (INIS)

    Huang, Xiaobiao; Safranek, James

    2014-01-01

    Nonlinear dynamics optimization is carried out for a low emittance upgrade lattice of SPEAR3 in order to improve its dynamic aperture and Touschek lifetime. Two multi-objective optimization algorithms, a genetic algorithm and a particle swarm algorithm, are used for this study. The performance of the two algorithms are compared. The result shows that the particle swarm algorithm converges significantly faster to similar or better solutions than the genetic algorithm and it does not require seeding of good solutions in the initial population. These advantages of the particle swarm algorithm may make it more suitable for many accelerator optimization applications

  19. Nonlinear dynamics optimization with particle swarm and genetic algorithms for SPEAR3 emittance upgrade

    Energy Technology Data Exchange (ETDEWEB)

    Huang, Xiaobiao, E-mail: xiahuang@slac.stanford.edu; Safranek, James

    2014-09-01

    Nonlinear dynamics optimization is carried out for a low emittance upgrade lattice of SPEAR3 in order to improve its dynamic aperture and Touschek lifetime. Two multi-objective optimization algorithms, a genetic algorithm and a particle swarm algorithm, are used for this study. The performance of the two algorithms are compared. The result shows that the particle swarm algorithm converges significantly faster to similar or better solutions than the genetic algorithm and it does not require seeding of good solutions in the initial population. These advantages of the particle swarm algorithm may make it more suitable for many accelerator optimization applications.

  20. A range-based predictive localization algorithm for WSID networks

    Science.gov (United States)

    Liu, Yuan; Chen, Junjie; Li, Gang

    2017-11-01

    Most studies on localization algorithms are conducted on the sensor networks with densely distributed nodes. However, the non-localizable problems are prone to occur in the network with sparsely distributed sensor nodes. To solve this problem, a range-based predictive localization algorithm (RPLA) is proposed in this paper for the wireless sensor networks syncretizing the RFID (WSID) networks. The Gaussian mixture model is established to predict the trajectory of a mobile target. Then, the received signal strength indication is used to reduce the residence area of the target location based on the approximate point-in-triangulation test algorithm. In addition, collaborative localization schemes are introduced to locate the target in the non-localizable situations. Simulation results verify that the RPLA achieves accurate localization for the network with sparsely distributed sensor nodes. The localization accuracy of the RPLA is 48.7% higher than that of the APIT algorithm, 16.8% higher than that of the single Gaussian model-based algorithm and 10.5% higher than that of the Kalman filtering-based algorithm.

  1. Biological engineering applications of feedforward neural networks designed and parameterized by genetic algorithms.

    Science.gov (United States)

    Ferentinos, Konstantinos P

    2005-09-01

    Two neural network (NN) applications in the field of biological engineering are developed, designed and parameterized by an evolutionary method based on the evolutionary process of genetic algorithms. The developed systems are a fault detection NN model and a predictive modeling NN system. An indirect or 'weak specification' representation was used for the encoding of NN topologies and training parameters into genes of the genetic algorithm (GA). Some a priori knowledge of the demands in network topology for specific application cases is required by this approach, so that the infinite search space of the problem is limited to some reasonable degree. Both one-hidden-layer and two-hidden-layer network architectures were explored by the GA. Except for the network architecture, each gene of the GA also encoded the type of activation functions in both hidden and output nodes of the NN and the type of minimization algorithm that was used by the backpropagation algorithm for the training of the NN. Both models achieved satisfactory performance, while the GA system proved to be a powerful tool that can successfully replace the problematic trial-and-error approach that is usually used for these tasks.

  2. Fuzzy model predictive control algorithm applied in nuclear power plant

    International Nuclear Information System (INIS)

    Zuheir, Ahmad

    2006-01-01

    The aim of this paper is to design a predictive controller based on a fuzzy model. The Takagi-Sugeno fuzzy model with an Adaptive B-splines neuro-fuzzy implementation is used and incorporated as a predictor in a predictive controller. An optimization approach with a simplified gradient technique is used to calculate predictions of the future control actions. In this approach, adaptation of the fuzzy model using dynamic process information is carried out to build the predictive controller. The easy description of the fuzzy model and the easy computation of the gradient sector during the optimization procedure are the main advantages of the computation algorithm. The algorithm is applied to the control of a U-tube steam generation unit (UTSG) used for electricity generation. (author)

  3. A Comparative Study of Fuzzy Logic, Genetic Algorithm, and Gradient-Genetic Algorithm Optimization Methods for Solving the Unit Commitment Problem

    Directory of Open Access Journals (Sweden)

    Sahbi Marrouchi

    2014-01-01

    Full Text Available Due to the continuous increase of the population and the perpetual progress of industry, the energy management presents nowadays a relevant topic that concerns researchers in electrical engineering. Indeed, in order to establish a good exploitation of the electrical grid, it is necessary to solve technical and economic problems. This can only be done through the resolution of the Unit Commitment Problem. Unit Commitment Problem allows optimizing the combination of the production units’ states and determining their production planning, in order to satisfy the expected consumption with minimal cost during a specified period which varies usually from 24 hours to one week. However, each production unit has some constraints that make this problem complex, combinatorial, and nonlinear. This paper presents a comparative study between a strategy based on hybrid gradient-genetic algorithm method and two strategies based on metaheuristic methods, fuzzy logic, and genetic algorithm, in order to predict the combinations and the unit commitment scheduling of each production unit in one side and to minimize the total production cost in the other side. To test the performance of the optimization proposed strategies, strategies have been applied to the IEEE electrical network 14 busses and the obtained results are very promising.

  4. General asymmetric neutral networks and structure design by genetic algorithms: A learning rule for temporal patterns

    Energy Technology Data Exchange (ETDEWEB)

    Bornholdt, S. [Heidelberg Univ., (Germany). Inst., fuer Theoretische Physik; Graudenz, D. [Lawrence Berkeley Lab., CA (United States)

    1993-07-01

    A learning algorithm based on genetic algorithms for asymmetric neural networks with an arbitrary structure is presented. It is suited for the learning of temporal patterns and leads to stable neural networks with feedback.

  5. General asymmetric neutral networks and structure design by genetic algorithms: A learning rule for temporal patterns

    International Nuclear Information System (INIS)

    Bornholdt, S.

    1993-07-01

    A learning algorithm based on genetic algorithms for asymmetric neural networks with an arbitrary structure is presented. It is suited for the learning of temporal patterns and leads to stable neural networks with feedback

  6. A test sheet generating algorithm based on intelligent genetic algorithm and hierarchical planning

    Science.gov (United States)

    Gu, Peipei; Niu, Zhendong; Chen, Xuting; Chen, Wei

    2013-03-01

    In recent years, computer-based testing has become an effective method to evaluate students' overall learning progress so that appropriate guiding strategies can be recommended. Research has been done to develop intelligent test assembling systems which can automatically generate test sheets based on given parameters of test items. A good multisubject test sheet depends on not only the quality of the test items but also the construction of the sheet. Effective and efficient construction of test sheets according to multiple subjects and criteria is a challenging problem. In this paper, a multi-subject test sheet generation problem is formulated and a test sheet generating approach based on intelligent genetic algorithm and hierarchical planning (GAHP) is proposed to tackle this problem. The proposed approach utilizes hierarchical planning to simplify the multi-subject testing problem and adopts genetic algorithm to process the layered criteria, enabling the construction of good test sheets according to multiple test item requirements. Experiments are conducted and the results show that the proposed approach is capable of effectively generating multi-subject test sheets that meet specified requirements and achieve good performance.

  7. An Improved Hierarchical Genetic Algorithm for Sheet Cutting Scheduling with Process Constraints

    OpenAIRE

    Yunqing Rao; Dezhong Qi; Jinling Li

    2013-01-01

    For the first time, an improved hierarchical genetic algorithm for sheet cutting problem which involves n cutting patterns for m non-identical parallel machines with process constraints has been proposed in the integrated cutting stock model. The objective of the cutting scheduling problem is minimizing the weighted completed time. A mathematical model for this problem is presented, an improved hierarchical genetic algorithm (ant colony—hierarchical genetic algorithm) is developed for better ...

  8. Predicting Subcellular Localization of Proteins by Bioinformatic Algorithms

    DEFF Research Database (Denmark)

    Nielsen, Henrik

    2015-01-01

    was used. Various statistical and machine learning algorithms are used with all three approaches, and various measures and standards are employed when reporting the performances of the developed methods. This chapter presents a number of available methods for prediction of sorting signals and subcellular...

  9. Nuclear power plant maintenance scheduling dilemma: a genetic algorithm approach

    International Nuclear Information System (INIS)

    Mahdavi, M.H.; Modarres, M.

    2004-01-01

    There are huge numbers of components scheduled for maintenance when a nuclear power plant is shut down. Among these components, a number of them are safety related which their operability as well as reliability when plant becomes up is main concerns. Not performing proper maintenance on this class of components/system would impose substantial risk on operating the NPP. In this paper a new approach based on genetic algorithms is presented to optimize the NPP maintenance schedule during shutdown. following this approach the cost incurred by maintenance activities for each schedule is balanced with the risk imposed by the maintenance scheduling plan to the plant operation status when it is up. The risk model implemented in the GA scheduler as its evaluation function is developed on the basis of the probabilistic risk assessment methodology. the Ga optimizers itself is shown to be superior compared to other optimization methods such as the monte carlo technique

  10. District Heating Network Design and Configuration Optimization with Genetic Algorithm

    DEFF Research Database (Denmark)

    Li, Hongwei; Svendsen, Svend

    2013-01-01

    In this paper, the configuration of a district heating network which connects from the heating plant to the end users is optimized. Each end user in the network represents a building block. The connections between the heat generation plant and the end users are represented with mixed integer...... and the pipe friction and heat loss formulations are non-linear. In order to find the optimal district heating network configuration, genetic algorithm which handles the mixed integer nonlinear programming problem is chosen. The network configuration is represented with binary and integer encoding...... and it is optimized in terms of the net present cost. The optimization results indicates that the optimal DH network configuration is determined by multiple factors such as the consumer heating load, the distance between the heating plant to the consumer, the design criteria regarding the pressure and temperature...

  11. District Heating Network Design and Configuration Optimization with Genetic Algorithm

    DEFF Research Database (Denmark)

    Li, Hongwei; Svendsen, Svend

    2011-01-01

    In this paper, the configuration of a district heating (DH) network which connects from the heating plant to the end users was optimized with emphasizing the network thermal performance. Each end user in the network represents a building block. The locations of the building blocks are fixed while...... the heating plant location is allowed to vary. The connection between the heat generation plant and the end users can be represented with mixed integer and the pipe friction and heat loss formulations are non-linear. In order to find the optimal DH distribution pipeline configuration, the genetic algorithm...... by multi factors as the consumer heating load, the distance between the heating plant to the consumer, the design criteria regarding pressure and temperature limitation, as well as the corresponding network heat loss....

  12. Genetic Algorithms and Nucleation in VIH-AIDS transition.

    Science.gov (United States)

    Barranon, Armando

    2003-03-01

    VIH to AIDS transition has been modeled via a genetic algorithm that uses boom-boom principle and where population evolution is simulated with a cellular automaton based on SIR model. VIH to AIDS transition is signed by nucleation of infected cells and low probability of infection are obtained for different mutation rates in agreement with clinical results. A power law is obtained with a critical exponent close to the critical exponent of cubic, spherical percolation, colossal magnetic resonance, Ising Model and liquid-gas phase transition in heavy ion collisions. Computations were carried out at UAM-A Supercomputing Lab and author acknowledges financial support from Division of CBI at UAM-A.

  13. Fuzzy Genetic Algorithm Based on Principal Operation and Inequity Degree

    Science.gov (United States)

    Li, Fachao; Jin, Chenxia

    In this paper, starting from the structure of fuzzy information, by distinguishing principal indexes and assistant indexes, give comparison of fuzzy information on synthesizing effect and operation of fuzzy optimization on principal indexes transformation, further, propose axiom system of fuzzy inequity degree from essence of constraint, and give an instructive metric method; Then, combining genetic algorithm, give fuzzy optimization methods based on principal operation and inequity degree (denoted by BPO&ID-FGA, for short); Finally, consider its convergence using Markov chain theory and analyze its performance through an example. All these indicate, BPO&ID-FGA can not only effectively merge decision consciousness into the optimization process, but possess better global convergence, so it can be applied to many fuzzy optimization problems.

  14. Scheduling Diet for Diabetes Mellitus Patients using Genetic Algorithm

    Science.gov (United States)

    Syahputra, M. F.; Felicia, V.; Rahmat, R. F.; Budiarto, R.

    2017-01-01

    Diabetes Melitus (DM) is one of metabolic diseases which affects on productivity and lowers the human resources quality. This disease can be controlled by maintaining and regulating balanced and healthy lifestyle especially for daily diet. However, nowadays, there is no system able to help DM patient to get any information of proper diet. Therefore, an approach is required to provide scheduling diet every day in a week with appropriate nutrition for DM patients to help them regulate their daily diet for healing this disease. In this research, we calculate the number of caloric needs using Harris-Benedict equation and propose genetic algorithm for scheduling diet for DM patient. The results show that the greater the number of individuals, the greater the more the possibility of changes in fitness score approaches the best fitness score. Moreover, the greater the created generation, the more the opportunites to obtain best individual with fitness score approaching 0 or equal to 0.

  15. Optimization on Trajectory of Stanford Manipulator based on Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Han Xi

    2017-01-01

    Full Text Available The optimization of robot manipulator’s trajectory has become a hot topic in academic and industrial fields. In this paper, a method for minimizing the moving distance of robot manipulators is presented. The Stanford Manipulator is used as the research object and the inverse kinematics model is established with Denavit-Hartenberg method. Base on the initial posture matrix, the inverse kinematics model is used to find the initial state of each joint. In accordance with the given beginning moment, cubic polynomial interpolation is applied to each joint variable and the positive kinematic model is used to calculate the moving distance of end effector. Genetic algorithm is used to optimize the sequential order of each joint and the time difference between different starting time of joints. Numerical applications involving a Stanford manipulator are presented.

  16. Reduced scale PWR passive safety system designing by genetic algorithms

    International Nuclear Information System (INIS)

    Cunha, Joao J. da; Alvim, Antonio Carlos M.; Lapa, Celso Marcelo Franklin

    2007-01-01

    This paper presents the concept of 'Design by Genetic Algorithms (DbyGA)', applied to a new reduced scale system problem. The design problem of a passive thermal-hydraulic safety system, considering dimensional and operational constraints, has been solved. Taking into account the passive safety characteristics of the last nuclear reactor generation, a PWR core under natural circulation is used in order to demonstrate the methodology applicability. The results revealed that some solutions (reduced scale system DbyGA) are capable of reproducing, both accurately and simultaneously, much of the physical phenomena that occur in real scale and operating conditions. However, some aspects, revealed by studies of cases, pointed important possibilities to DbyGA methodological performance improvement

  17. GENETIC ALGORITHM BASED CONCEPT DESIGN TO OPTIMIZE NETWORK LOAD BALANCE

    Directory of Open Access Journals (Sweden)

    Ashish Jain

    2012-07-01

    Full Text Available Multiconstraints optimal network load balancing is an NP-hard problem and it is an important part of traffic engineering. In this research we balance the network load using classical method (brute force approach and dynamic programming is used but result shows the limitation of this method but at a certain level we recognized that the optimization of balanced network load with increased number of nodes and demands is intractable using the classical method because the solution set increases exponentially. In such case the optimization techniques like evolutionary techniques can employ for optimizing network load balance. In this paper we analyzed proposed classical algorithm and evolutionary based genetic approach is devise as well as proposed in this paper for optimizing the balance network load.

  18. A genetic algorithm for preemptive scheduling of a single machine

    Directory of Open Access Journals (Sweden)

    Amir-Mohammad Golmohammadi

    2016-09-01

    Full Text Available This paper presents a mathematical model for scheduling of a single machine when there are preemptions in jobs. The primary objective of the study is to minimize different objectives such as earliness, tardiness and work in process. The proposed mathematical problem is considered as NP-Hard and the optimal solution is available for small scale problems. Therefore, a genetic algorithm (GA is developed to solve the problem for large-scale problems. The implementation of the proposed model is compared with GA for problems with up to 50 jobs using three methods of roulette wheel sampling, random sampling and competition sampling. The results have indicated that competition sampling has reached optimal solutions for small scale problems and it could obtain better near-optimal solutions in relatively lower running time compared with other sampling methods.

  19. Analysis of Shrinkage on Thick Plate Part using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Najihah S.N.

    2016-01-01

    Full Text Available Injection moulding is the most widely used processes in manufacturing plastic products. Since the quality of injection improves plastic parts are mostly influenced by process conditions, the method to determine the optimum process conditions becomes the key to improving the part quality. This paper presents a systematic methodology to analyse the shrinkage of the thick plate part during the injection moulding process. Genetic Algorithm (GA method was proposed to optimise the process parameters that would result in optimal solutions of optimisation goals. Using the GA, the shrinkage of the thick plate part was improved by 39.1% in parallel direction and 17.21% in the normal direction of melt flow.

  20. Genetic Algorithms for Development of New Financial Products

    Directory of Open Access Journals (Sweden)

    Eder Oliveira Abensur

    2007-06-01

    Full Text Available New Product Development (NPD is recognized as a fundamental activity that has a relevant impact on the performance of companies. Despite the relevance of the financial market there is a lack of work on new financial product development. The aim of this research is to propose the use of Genetic Algorithms (GA as an alternative procedure for evaluating the most favorable combination of variables for the product launch. The paper focuses on: (i determining the essential variables of the financial product studied (investment fund; (ii determining how to evaluate the success of a new investment fund launch and (iii how GA can be applied to the financial product development problem. The proposed framework was tested using 4 years of real data from the Brazilian financial market and the results suggest that this is an innovative development methodology and useful for designing complex financial products with many attributes.

  1. Genetic Algorithms vs. Artificial Neural Networks in Economic Forecasting Process

    Directory of Open Access Journals (Sweden)

    Nicolae Morariu

    2008-01-01

    Full Text Available This paper aims to describe the implementa-tion of a neural network and a genetic algorithm system in order to forecast certain economic indicators of a free market economy. In a free market economy forecasting process precedes the economic planning (a management function, providing important information for the result of the last process. Forecasting represents a starting point in setting of target for a firm, an organization or even a branch of the economy. Thus, the forecasting method used can influence in a significant mode the evolution of an entity. In the following we will describe the forecasting of an economic indicator using two intelligent systems. The difference between the results obtained by this two systems are described in chapter IV.

  2. A genetic algorithm application in backcross breeding problem

    Science.gov (United States)

    Carnia, E.; Napitupulu, H.; Supriatna, A. K.

    2018-03-01

    In this paper we discuss a mathematical model of goat breeding strategy, i.e. the backcrossing breeding. The model is aimed to obtain a strategy in producing better variant of species. In this strategy, a female (doe) of a lesser quality goat, in terms of goat quality is bred with a male (buck) of an exotic goat which has a better goat quality. In this paper we will explore a problem on how to harvest the population optimally. A genetic algorithm (GA) approach will been devised to obtain the solution of the problem. We do several trials of the GA implementation which gives different set of solutions, but relatively close to each other in terms of the resulting total revenue, except a few. Further study need to be done to obtain GA solution that closer to the exact solution.

  3. An Intelligent Model for Pairs Trading Using Genetic Algorithms.

    Science.gov (United States)

    Huang, Chien-Feng; Hsu, Chi-Jen; Chen, Chi-Chung; Chang, Bao Rong; Li, Chen-An

    2015-01-01

    Pairs trading is an important and challenging research area in computational finance, in which pairs of stocks are bought and sold in pair combinations for arbitrage opportunities. Traditional methods that solve this set of problems mostly rely on statistical methods such as regression. In contrast to the statistical approaches, recent advances in computational intelligence (CI) are leading to promising opportunities for solving problems in the financial applications more effectively. In this paper, we present a novel methodology for pairs trading using genetic algorithms (GA). Our results showed that the GA-based models are able to significantly outperform the benchmark and our proposed method is capable of generating robust models to tackle the dynamic characteristics in the financial application studied. Based upon the promising results obtained, we expect this GA-based method to advance the research in computational intelligence for finance and provide an effective solution to pairs trading for investment in practice.

  4. Combinatorial Optimization in Project Selection Using Genetic Algorithm

    Science.gov (United States)

    Dewi, Sari; Sawaluddin

    2018-01-01

    This paper discusses the problem of project selection in the presence of two objective functions that maximize profit and minimize cost and the existence of some limitations is limited resources availability and time available so that there is need allocation of resources in each project. These resources are human resources, machine resources, raw material resources. This is treated as a consideration to not exceed the budget that has been determined. So that can be formulated mathematics for objective function (multi-objective) with boundaries that fulfilled. To assist the project selection process, a multi-objective combinatorial optimization approach is used to obtain an optimal solution for the selection of the right project. It then described a multi-objective method of genetic algorithm as one method of multi-objective combinatorial optimization approach to simplify the project selection process in a large scope.

  5. Some Studies on Forming Optimization with Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Ganesh Marotrao KAKANDIKAR

    2012-07-01

    Full Text Available Forming is a compression-tension process involving wide spectrum of operations andflow conditions. The result of the process depends on the large number of parameters and theirinterdependence. The selection of various parameters is still based on trial and error methods. In thispaper the authors present a new approach to optimize the geometry parameters of circularcomponents, process parameters such as blank holder pressure and coefficient of friction etc. Theoptimization problem has been formulated with the objective of optimizing the maximum formingload required in Forming. Genetic algorithm is used as a tool for the optimization: to optimize thedrawing load and to optimize the process parameters. A finite element analysis simulation softwareFast Form Advanced is used for the validations of the results after optimization with prior results.

  6. Multi-objective optimization using genetic algorithms: A tutorial

    International Nuclear Information System (INIS)

    Konak, Abdullah; Coit, David W.; Smith, Alice E.

    2006-01-01

    Multi-objective formulations are realistic models for many complex engineering optimization problems. In many real-life problems, objectives under consideration conflict with each other, and optimizing a particular solution with respect to a single objective can result in unacceptable results with respect to the other objectives. A reasonable solution to a multi-objective problem is to investigate a set of solutions, each of which satisfies the objectives at an acceptable level without being dominated by any other solution. In this paper, an overview and tutorial is presented describing genetic algorithms (GA) developed specifically for problems with multiple objectives. They differ primarily from traditional GA by using specialized fitness functions and introducing methods to promote solution diversity

  7. Bias correction of daily satellite precipitation data using genetic algorithm

    Science.gov (United States)

    Pratama, A. W.; Buono, A.; Hidayat, R.; Harsa, H.

    2018-05-01

    Climate Hazards Group InfraRed Precipitation with Stations (CHIRPS) was producted by blending Satellite-only Climate Hazards Group InfraRed Precipitation (CHIRP) with Stasion observations data. The blending process was aimed to reduce bias of CHIRP. However, Biases of CHIRPS on statistical moment and quantil values were high during wet season over Java Island. This paper presented a bias correction scheme to adjust statistical moment of CHIRP using observation precipitation data. The scheme combined Genetic Algorithm and Nonlinear Power Transformation, the results was evaluated based on different season and different elevation level. The experiment results revealed that the scheme robustly reduced bias on variance around 100% reduction and leaded to reduction of first, and second quantile biases. However, bias on third quantile only reduced during dry months. Based on different level of elevation, the performance of bias correction process is only significantly different on skewness indicators.

  8. Tuning of active vibration controllers for ACTEX by genetic algorithm

    Science.gov (United States)

    Kwak, Moon K.; Denoyer, Keith K.

    1999-06-01

    This paper is concerned with the optimal tuning of digitally programmable analog controllers on the ACTEX-1 smart structures flight experiment. The programmable controllers for each channel include a third order Strain Rate Feedback (SRF) controller, a fifth order SRF controller, a second order Positive Position Feedback (PPF) controller, and a fourth order PPF controller. Optimal manual tuning of several control parameters can be a difficult task even though the closed-loop control characteristics of each controller are well known. Hence, the automatic tuning of individual control parameters using Genetic Algorithms is proposed in this paper. The optimal control parameters of each control law are obtained by imposing a constraint on the closed-loop frequency response functions using the ACTEX mathematical model. The tuned control parameters are then uploaded to the ACTEX electronic control electronics and experiments on the active vibration control are carried out in space. The experimental results on ACTEX will be presented.

  9. Reusable rocket engine preventive maintenance scheduling using genetic algorithm

    International Nuclear Information System (INIS)

    Chen, Tao; Li, Jiawen; Jin, Ping; Cai, Guobiao

    2013-01-01

    This paper deals with the preventive maintenance (PM) scheduling problem of reusable rocket engine (RRE), which is different from the ordinary repairable systems, by genetic algorithm. Three types of PM activities for RRE are considered and modeled by introducing the concept of effective age. The impacts of PM on all subsystems' aging processes are evaluated based on improvement factor model. Then the reliability of engine is formulated by considering the accumulated time effect. After that, optimization model subjected to reliability constraint is developed for RRE PM scheduling at fixed interval. The optimal PM combination is obtained by minimizing the total cost in the whole life cycle for a supposed engine. Numerical investigations indicate that the subsystem's intrinsic reliability characteristic and the improvement factor of maintain operations are the most important parameters in RRE's PM scheduling management

  10. Using Genetic Algorithm to Estimate Hydraulic Parameters of Unconfined Aquifers

    Directory of Open Access Journals (Sweden)

    Asghar Asghari Moghaddam

    2009-03-01

    Full Text Available Nowadays, optimization techniques such as Genetic Algorithms (GA have attracted wide attention among scientists for solving complicated engineering problems. In this article, pumping test data are used to assess the efficiency of GA in estimating unconfined aquifer parameters and a sensitivity analysis is carried out to propose an optimal arrangement of GA. For this purpose, hydraulic parameters of three sets of pumping test data are calculated by GA and they are compared with the results of graphical methods. The results indicate that the GA technique is an efficient, reliable, and powerful method for estimating the hydraulic parameters of unconfined aquifer and, further, that in cases of deficiency in pumping test data, it has a better performance than graphical methods.

  11. Optimization of high harmonic generation by genetic algorithm

    International Nuclear Information System (INIS)

    Constance Valentin; Olga Boyko; Gilles Rey; Brigitte Mercier; Evaggelos Papalazarou; Laure Antonucci; Philippe Balcou

    2006-01-01

    Complete test of publication follows. High Harmonic Generation (HHG) is very sensitive to pulse shape of the fundamental laser. We have first used an Acousto-Optic Programmable Dispersive Filter (AOPDF) in order to modify the spectral phase and second, a deformable mirror in order to modify the wavefront. We have optimized harmonic signal using a genetic algorithm coupled with both setups. We show the influence of macroscopic parameters for optimization process. Genetic algorithms have been already used to modify pulse shapes of the fundamental laser in order to optimize high harmonic signals, in order to change the emission wavelength of one harmonic or to modify the fundamental wavefront to optimize harmonic signals. For the first time, we present a systematic study of the optimization of harmonic signals using the AOPDF. Signal optimizations by a factor 2 to 10 have been measured depending of parameters of generation. For instance, one of the interesting result concerns the effect of macroscopic parameters as position of the entrance of the cell with respect to the focus of the IR laser when we change the pulse shapes. For instance, the optimization is higher when the cell entrance is above the focus where the intensity gradients are higher. Although the spectral phase of the IR laser is important for the response of one atom, the optimization depends also of phase-matching and especially of the effect intensity gradients. Other systematic studies have been performed as well as measurements of temporal profiles and wavefronts of the IR beam. These studies allow bringing out the behaviour of high harmonic generation with respect to the optimization process.

  12. Cloud identification using genetic algorithms and massively parallel computation

    Science.gov (United States)

    Buckles, Bill P.; Petry, Frederick E.

    1996-01-01

    As a Guest Computational Investigator under the NASA administered component of the High Performance Computing and Communication Program, we implemented a massively parallel genetic algorithm on the MasPar SIMD computer. Experiments were conducted using Earth Science data in the domains of meteorology and oceanography. Results obtained in these domains are competitive with, and in most cases better than, similar problems solved using other methods. In the meteorological domain, we chose to identify clouds using AVHRR spectral data. Four cloud speciations were used although most researchers settle for three. Results were remarkedly consistent across all tests (91% accuracy). Refinements of this method may lead to more timely and complete information for Global Circulation Models (GCMS) that are prevalent in weather forecasting and global environment studies. In the oceanographic domain, we chose to identify ocean currents from a spectrometer having similar characteristics to AVHRR. Here the results were mixed (60% to 80% accuracy). Given that one is willing to run the experiment several times (say 10), then it is acceptable to claim the higher accuracy rating. This problem has never been successfully automated. Therefore, these results are encouraging even though less impressive than the cloud experiment. Successful conclusion of an automated ocean current detection system would impact coastal fishing, naval tactics, and the study of micro-climates. Finally we contributed to the basic knowledge of GA (genetic algorithm) behavior in parallel environments. We developed better knowledge of the use of subpopulations in the context of shared breeding pools and the migration of individuals. Rigorous experiments were conducted based on quantifiable performance criteria. While much of the work confirmed current wisdom, for the first time we were able to submit conclusive evidence. The software developed under this grant was placed in the public domain. An extensive user

  13. Reactor controller design using genetic algorithm with simulated annealing

    International Nuclear Information System (INIS)

    Willjuice Iruthyarajan, M.

    2012-01-01

    Many reactor control design work, specifically the problem of synthesis and optimization of reactor networks involving the classical reaction schemes was studied, considering a superstructure formed by a CSTR and a PFR and their possible arrangements. A genetic algorithm was proposed, together with a systematic procedure. Two case studies were solved with the proposed systematic. Both of them present similar results than the published in the literature. The first case studied was the Trambouze reaction scheme. Although selectivity values are smaller then the values published in the referred papers, the reactors system combined volume is always minor them the other ones. The second case studied was the Van de Vusse reaction scheme. In this case, the obtained value for the total volume is always minor then the considered papers. One can conclude that when compared with the other works presented in the literature results are compatible and very interesting. The developed algorithms can be used as a good alternative for reactor networks design and optimization problem

  14. Primary chromatic aberration elimination via optimization work with genetic algorithm

    Science.gov (United States)

    Wu, Bo-Wen; Liu, Tung-Kuan; Fang, Yi-Chin; Chou, Jyh-Horng; Tsai, Hsien-Lin; Chang, En-Hao

    2008-09-01

    Chromatic Aberration plays a part in modern optical systems, especially in digitalized and smart optical systems. Much effort has been devoted to eliminating specific chromatic aberration in order to match the demand for advanced digitalized optical products. Basically, the elimination of axial chromatic and lateral color aberration of an optical lens and system depends on the selection of optical glass. According to reports from glass companies all over the world, the number of various newly developed optical glasses in the market exceeds three hundred. However, due to the complexity of a practical optical system, optical designers have so far had difficulty in finding the right solution to eliminate small axial and lateral chromatic aberration except by the Damped Least Squares (DLS) method, which is limited in so far as the DLS method has not yet managed to find a better optical system configuration. In the present research, genetic algorithms are used to replace traditional DLS so as to eliminate axial and lateral chromatic, by combining the theories of geometric optics in Tessar type lenses and a technique involving Binary/Real Encoding, Multiple Dynamic Crossover and Random Gene Mutation to find a much better configuration for optical glasses. By implementing the algorithms outlined in this paper, satisfactory results can be achieved in eliminating axial and lateral color aberration.

  15. Improved Genetic Algorithm Optimization for Forward Vehicle Detection Problems

    Directory of Open Access Journals (Sweden)

    Longhui Gang

    2015-07-01

    Full Text Available Automated forward vehicle detection is an integral component of many advanced driver-assistance systems. The method based on multi-visual information fusion, with its exclusive advantages, has become one of the important topics in this research field. During the whole detection process, there are two key points that should to be resolved. One is to find the robust features for identification and the other is to apply an efficient algorithm for training the model designed with multi-information. This paper presents an adaptive SVM (Support Vector Machine model to detect vehicle with range estimation using an on-board camera. Due to the extrinsic factors such as shadows and illumination, we pay more attention to enhancing the system with several robust features extracted from a real driving environment. Then, with the introduction of an improved genetic algorithm, the features are fused efficiently by the proposed SVM model. In order to apply the model in the forward collision warning system, longitudinal distance information is provided simultaneously. The proposed method is successfully implemented on a test car and evaluation experimental results show reliability in terms of both the detection rate and potential effectiveness in a real-driving environment.

  16. Genetic Algorithm-Based Identification of Fractional-Order Systems

    Directory of Open Access Journals (Sweden)

    Shengxi Zhou

    2013-05-01

    Full Text Available Fractional calculus has become an increasingly popular tool for modeling the complex behaviors of physical systems from diverse domains. One of the key issues to apply fractional calculus to engineering problems is to achieve the parameter identification of fractional-order systems. A time-domain identification algorithm based on a genetic algorithm (GA is proposed in this paper. The multi-variable parameter identification is converted into a parameter optimization by applying GA to the identification of fractional-order systems. To evaluate the identification accuracy and stability, the time-domain output error considering the condition variation is designed as the fitness function for parameter optimization. The identification process is established under various noise levels and excitation levels. The effects of external excitation and the noise level on the identification accuracy are analyzed in detail. The simulation results show that the proposed method could identify the parameters of both commensurate rate and non-commensurate rate fractional-order systems from the data with noise. It is also observed that excitation signal is an important factor influencing the identification accuracy of fractional-order systems.

  17. Application of a hybrid model of neural networks and genetic algorithms to evaluate landslide susceptibility

    Science.gov (United States)

    Wang, H. B.; Li, J. W.; Zhou, B.; Yuan, Z. Q.; Chen, Y. P.

    2013-03-01

    In the last few decades, the development of Geographical Information Systems (GIS) technology has provided a method for the evaluation of landslide susceptibility and hazard. Slope units were found to be appropriate for the fundamental morphological elements in landslide susceptibility evaluation. Following the DEM construction in a loess area susceptible to landslides, the direct-reverse DEM technology was employed to generate 216 slope units in the studied area. After a detailed investigation, the landslide inventory was mapped in which 39 landslides, including paleo-landslides, old landslides and recent landslides, were present. Of the 216 slope units, 123 involved landslides. To analyze the mechanism of these landslides, six environmental factors were selected to evaluate landslide occurrence: slope angle, aspect, the height and shape of the slope, distance to river and human activities. These factors were extracted in terms of the slope unit within the ArcGIS software. The spatial analysis demonstrates that most of the landslides are located on convex slopes at an elevation of 100-150 m with slope angles from 135°-225° and 40°-60°. Landslide occurrence was then checked according to these environmental factors using an artificial neural network with back propagation, optimized by genetic algorithms. A dataset of 120 slope units was chosen for training the neural network model, i.e., 80 units with landslide presence and 40 units without landslide presence. The parameters of genetic algorithms and neural networks were then set: population size of 100, crossover probability of 0.65, mutation probability of 0.01, momentum factor of 0.60, learning rate of 0.7, max learning number of 10 000, and target error of 0.000001. After training on the datasets, the susceptibility of landslides was mapped for the land-use plan and hazard mitigation. Comparing the susceptibility map with landslide inventory, it was noted that the prediction accuracy of landslide occurrence

  18. Nitrate leaching from a potato field using fuzzy inference system combined with genetic algorithm

    DEFF Research Database (Denmark)

    Shekofteh, Hosein; Afyuni, Majid M; Hajabbasi, Mohammad-Ali

    2012-01-01

    in MFIS were tuned by Genetic Algorithm. The correlation coefficient, normalized root mean square error and relative mean absolute error percentage between the data obtained by HYDRUS-2D and the estimated values using MFIS model were 0.986, 0.086 and 2.38 respectively. It appears that MFIS can predict......The conventional application of nitrogen fertilizers via irrigation is likely to be responsible for the increased nitrate concentration in groundwater of areas dominated by irrigated agriculture. This requires appropriate water and nutrient management to minimize groundwater pollution...

  19. Determination of Selection Method in Genetic Algorithm for Land Suitability

    Directory of Open Access Journals (Sweden)

    Irfianti Asti Dwi

    2016-01-01

    Full Text Available Genetic Algoirthm is one alternative solution in the field of modeling optimization, automatic programming and machine learning. The purpose of the study was to compare some type of selection methods in Genetic Algorithm for land suitability. Contribution of this research applies the best method to develop region based horticultural commodities. This testing is done by comparing the three methods on the method of selection, the Roulette Wheel, Tournament Selection and Stochastic Universal Sampling. Parameters of the locations used in the test scenarios include Temperature = 27°C, Rainfall = 1200 mm, hummidity = 30%, Cluster fruit = 4, Crossover Probabiitiy (Pc = 0.6, Mutation Probabilty (Pm = 0.2 and Epoch = 10. The second test epoch incluides location parameters consist of Temperature = 30°C, Rainfall = 2000 mm, Humidity = 35%, Cluster fruit = 5, Crossover Probability (Pc = 0.7, Mutation Probability (Pm = 0.3 and Epoch 10. The conclusion of this study shows that the Roulette Wheel is the best method because it produces more stable and fitness value than the other two methods.

  20. MICRONEEDLE STRUCTURE DESIGN AND OPTIMIZATION USING GENETIC ALGORITHM

    Directory of Open Access Journals (Sweden)

    N. A. ISMAIL

    2015-07-01

    Full Text Available This paper presents a Genetic Algorithm (GA based microneedle design and analysis. GA is an evolutionary optimization technique that mimics the natural biological evolution. The design of microneedle structure considers the shape of microneedle, material used, size of the array, the base of microneedle, the lumen base, the height of microneedle, the height of the lumen, and the height of the drug container or reservoir. The GA is executed in conjunction with ANSYS simulation system to assess the design specifications. The GA uses three operators which are reproduction, crossover and mutation to manipulate the genetic composition of the population. In this research, the microneedle is designed to meet a number of significant specifications such as nodal displacement, strain energy, equivalent stress and flow rate of the fluid / drug that flow through its channel / lumen. A comparison study is conducted to investigate the design of microneedle structure with and without the implementation of GA model. The results showed that GA is able to optimize the design parameters of microneedle and is capable to achieve the required specifications with better performance.

  1. PeptX: Using Genetic Algorithms to optimize peptides for MHC binding

    Directory of Open Access Journals (Sweden)

    Ribarics Reiner

    2011-06-01

    Full Text Available Abstract Background The binding between the major histocompatibility complex and the presented peptide is an indispensable prerequisite for the adaptive immune response. There is a plethora of different in silico techniques for the prediction of the peptide binding affinity to major histocompatibility complexes. Most studies screen a set of peptides for promising candidates to predict possible T cell epitopes. In this study we ask the question vice versa: Which peptides do have highest binding affinities to a given major histocompatibility complex according to certain in silico scoring functions? Results Since a full screening of all possible peptides is not feasible in reasonable runtime, we introduce a heuristic approach. We developed a framework for Genetic Algorithms to optimize peptides for the binding to major histocompatibility complexes. In an extensive benchmark we tested various operator combinations. We found that (1 selection operators have a strong influence on the convergence of the population while recombination operators have minor influence and (2 that five different binding prediction methods lead to five different sets of "optimal" peptides for the same major histocompatibility complex. The consensus peptides were experimentally verified as high affinity binders. Conclusion We provide a generalized framework to calculate sets of high affinity binders based on different previously published scoring functions in reasonable runtime. Furthermore we give insight into the different behaviours of operators and scoring functions of the Genetic Algorithm.

  2. Global optimization driven by genetic algorithms for disruption predictors based on APODIS architecture

    Energy Technology Data Exchange (ETDEWEB)

    Rattá, G.A., E-mail: giuseppe.ratta@ciemat.es [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain); Vega, J. [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain); Murari, A. [Consorzio RFX, Associazione EURATOM/ENEA per la Fusione, Padua (Italy); Dormido-Canto, S. [Dpto. de Informática y Automática, Universidad Nacional de Educación a Distancia, Madrid (Spain); Moreno, R. [Laboratorio Nacional de Fusión, CIEMAT, Madrid (Spain)

    2016-11-15

    Highlights: • A global optimization method based on genetic algorithms was developed. • It allowed improving the prediction of disruptions using APODIS architecture. • It also provides the potential opportunity to develop a spectrum of future predictors using different training datasets. • The future analysis of how their structures reassemble and evolve in each test may help to improve the development of disruption predictors for ITER. - Abstract: Since year 2010, the APODIS architecture has proven its accuracy predicting disruptions in JET tokamak. Nevertheless, it has shown margins for improvements, fact indisputable after the enhanced performances achieved in posterior upgrades. In this article, a complete optimization driven by Genetic Algorithms (GA) is applied to it aiming at considering all possible combination of signals, signal features, quantity of models, their characteristics and internal parameters. This global optimization targets the creation of the best possible system with a reduced amount of required training data. The results harbor no doubts about the reliability of the global optimization method, allowing to outperform the ones of previous versions: 91.77% of predictions (89.24% with an anticipation higher than 10 ms) with a 3.55% of false alarms. Beyond its effectiveness, it also provides the potential opportunity to develop a spectrum of future predictors using different training datasets.

  3. Global optimization driven by genetic algorithms for disruption predictors based on APODIS architecture

    International Nuclear Information System (INIS)

    Rattá, G.A.; Vega, J.; Murari, A.; Dormido-Canto, S.; Moreno, R.

    2016-01-01

    Highlights: • A global optimization method based on genetic algorithms was developed. • It allowed improving the prediction of disruptions using APODIS architecture. • It also provides the potential opportunity to develop a spectrum of future predictors using different training datasets. • The future analysis of how their structures reassemble and evolve in each test may help to improve the development of disruption predictors for ITER. - Abstract: Since year 2010, the APODIS architecture has proven its accuracy predicting disruptions in JET tokamak. Nevertheless, it has shown margins for improvements, fact indisputable after the enhanced performances achieved in posterior upgrades. In this article, a complete optimization driven by Genetic Algorithms (GA) is applied to it aiming at considering all possible combination of signals, signal features, quantity of models, their characteristics and internal parameters. This global optimization targets the creation of the best possible system with a reduced amount of required training data. The results harbor no doubts about the reliability of the global optimization method, allowing to outperform the ones of previous versions: 91.77% of predictions (89.24% with an anticipation higher than 10 ms) with a 3.55% of false alarms. Beyond its effectiveness, it also provides the potential opportunity to develop a spectrum of future predictors using different training datasets.

  4. Accurate Prediction of Coronary Artery Disease Using Bioinformatics Algorithms

    Directory of Open Access Journals (Sweden)

    Hajar Shafiee

    2016-06-01

    Full Text Available Background and Objectives: Cardiovascular disease is one of the main causes of death in developed and Third World countries. According to the statement of the World Health Organization, it is predicted that death due to heart disease will rise to 23 million by 2030. According to the latest statistics reported by Iran’s Minister of health, 3.39% of all deaths are attributed to cardiovascular diseases and 19.5% are related to myocardial infarction. The aim of this study was to predict coronary artery disease using data mining algorithms. Methods: In this study, various bioinformatics algorithms, such as decision trees, neural networks, support vector machines, clustering, etc., were used to predict coronary heart disease. The data used in this study was taken from several valid databases (including 14 data. Results: In this research, data mining techniques can be effectively used to diagnose different diseases, including coronary artery disease. Also, for the first time, a prediction system based on support vector machine with the best possible accuracy was introduced. Conclusion: The results showed that among the features, thallium scan variable is the most important feature in the diagnosis of heart disease. Designation of machine prediction models, such as support vector machine learning algorithm can differentiate between sick and healthy individuals with 100% accuracy.

  5. Predicting Smoking Status Using Machine Learning Algorithms and Statistical Analysis

    Directory of Open Access Journals (Sweden)

    Charles Frank

    2018-03-01

    Full Text Available Smoking has been proven to negatively affect health in a multitude of ways. As of 2009, smoking has been considered the leading cause of preventable morbidity and mortality in the United States, continuing to plague the country’s overall health. This study aims to investigate the viability and effectiveness of some machine learning algorithms for predicting the smoking status of patients based on their blood tests and vital readings results. The analysis of this study is divided into two parts: In part 1, we use One-way ANOVA analysis with SAS tool to show the statistically significant difference in blood test readings between smokers and non-smokers. The results show that the difference in INR, which measures the effectiveness of anticoagulants, was significant in favor of non-smokers which further confirms the health risks associated with smoking. In part 2, we use five machine learning algorithms: Naïve Bayes, MLP, Logistic regression classifier, J48 and Decision Table to predict the smoking status of patients. To compare the effectiveness of these algorithms we use: Precision, Recall, F-measure and Accuracy measures. The results show that the Logistic algorithm outperformed the four other algorithms with Precision, Recall, F-Measure, and Accuracy of 83%, 83.4%, 83.2%, 83.44%, respectively.

  6. Fast prediction of RNA-RNA interaction using heuristic algorithm.

    Science.gov (United States)

    Montaseri, Soheila

    2015-01-01

    Interaction between two RNA molecules plays a crucial role in many medical and biological processes such as gene expression regulation. In this process, an RNA molecule prohibits the translation of another RNA molecule by establishing stable interactions with it. Some algorithms have been formed to predict the structure of the RNA-RNA interaction. High computational time is a common challenge in most of the presented algorithms. In this context, a heuristic method is introduced to accurately predict the interaction between two RNAs based on minimum free energy (MFE). This algorithm uses a few dot matrices for finding the secondary structure of each RNA and binding sites between two RNAs. Furthermore, a parallel version of this method is presented. We describe the algorithm's concurrency and parallelism for a multicore chip. The proposed algorithm has been performed on some datasets including CopA-CopT, R1inv-R2inv, Tar-Tar*, DIS-DIS, and IncRNA54-RepZ in Escherichia coli bacteria. The method has high validity and efficiency, and it is run in low computational time in comparison to other approaches.

  7. ADORE-GA: Genetic algorithm variant of the ADORE algorithm for ROP detector layout optimization in CANDU reactors

    International Nuclear Information System (INIS)

    Kastanya, Doddy

    2012-01-01

    Highlights: ► ADORE is an algorithm for CANDU ROP Detector Layout Optimization. ► ADORE-GA is a Genetic Algorithm variant of the ADORE algorithm. ► Robustness test of ADORE-GA algorithm is presented in this paper. - Abstract: The regional overpower protection (ROP) systems protect CANDU® reactors against overpower in the fuel that could reduce the safety margin-to-dryout. The overpower could originate from a localized power peaking within the core or a general increase in the global core power level. The design of the detector layout for ROP systems is a challenging discrete optimization problem. In recent years, two algorithms have been developed to find a quasi optimal solution to this detector layout optimization problem. Both of these algorithms utilize the simulated annealing (SA) algorithm as their optimization engine. In the present paper, an alternative optimization algorithm, namely the genetic algorithm (GA), has been implemented as the optimization engine. The implementation is done within the ADORE algorithm. Results from evaluating the effects of using various mutation rates and crossover parameters are presented in this paper. It has been demonstrated that the algorithm is sufficiently robust in producing similar quality solutions.

  8. Prediction of Baseflow Index of Catchments using Machine Learning Algorithms

    Science.gov (United States)

    Yadav, B.; Hatfield, K.

    2017-12-01

    We present the results of eight machine learning techniques for predicting the baseflow index (BFI) of ungauged basins using a surrogate of catchment scale climate and physiographic data. The tested algorithms include ordinary least squares, ridge regression, least absolute shrinkage and selection operator (lasso), elasticnet, support vector machine, gradient boosted regression trees, random forests, and extremely randomized trees. Our work seeks to identify the dominant controls of BFI that can be readily obtained from ancillary geospatial databases and remote sensing measurements, such that the developed techniques can be extended to ungauged catchments. More than 800 gauged catchments spanning the continental United States were selected to develop the general methodology. The BFI calculation was based on the baseflow separated from daily streamflow hydrograph using HYSEP filter. The surrogate catchment attributes were compiled from multiple sources including digital elevation model, soil, landuse, climate data, other publicly available ancillary and geospatial data. 80% catchments were used to train the ML algorithms, and the remaining 20% of the catchments were used as an independent test set to measure the generalization performance of fitted models. A k-fold cross-validation using exhaustive grid search was used to fit the hyperparameters of each model. Initial model development was based on 19 independent variables, but after variable selection and feature ranking, we generated revised sparse models of BFI prediction that are based on only six catchment attributes. These key predictive variables selected after the careful evaluation of bias-variance tradeoff include average catchment elevation, slope, fraction of sand, permeability, temperature, and precipitation. The most promising algorithms exceeding an accuracy score (r-square) of 0.7 on test data include support vector machine, gradient boosted regression trees, random forests, and extremely randomized

  9. Efficient Dual Domain Decoding of Linear Block Codes Using Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Ahmed Azouaoui

    2012-01-01

    Full Text Available A computationally efficient algorithm for decoding block codes is developed using a genetic algorithm (GA. The proposed algorithm uses the dual code in contrast to the existing genetic decoders in the literature that use the code itself. Hence, this new approach reduces the complexity of decoding the codes of high rates. We simulated our algorithm in various transmission channels. The performance of this algorithm is investigated and compared with competitor decoding algorithms including Maini and Shakeel ones. The results show that the proposed algorithm gives large gains over the Chase-2 decoding algorithm and reach the performance of the OSD-3 for some quadratic residue (QR codes. Further, we define a new crossover operator that exploits the domain specific information and compare it with uniform and two point crossover. The complexity of this algorithm is also discussed and compared to other algorithms.

  10. Optimization of Multiple Traveling Salesman Problem Based on Simulated Annealing Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Xu Mingji

    2017-01-01

    Full Text Available It is very effective to solve the multi variable optimization problem by using hierarchical genetic algorithm. This thesis analyzes both advantages and disadvantages of hierarchical genetic algorithm and puts forward an improved simulated annealing genetic algorithm. The new algorithm is applied to solve the multiple traveling salesman problem, which can improve the performance of the solution. First, it improves the design of chromosomes hierarchical structure in terms of redundant hierarchical algorithm, and it suggests a suffix design of chromosomes; Second, concerning to some premature problems of genetic algorithm, it proposes a self-identify crossover operator and mutation; Third, when it comes to the problem of weak ability of local search of genetic algorithm, it stretches the fitness by mixing genetic algorithm with simulated annealing algorithm. Forth, it emulates the problems of N traveling salesmen and M cities so as to verify its feasibility. The simulation and calculation shows that this improved algorithm can be quickly converged to a best global solution, which means the algorithm is encouraging in practical uses.

  11. Predicting Coastal Flood Severity using Random Forest Algorithm

    Science.gov (United States)

    Sadler, J. M.; Goodall, J. L.; Morsy, M. M.; Spencer, K.

    2017-12-01

    Coastal floods have become more common recently and are predicted to further increase in frequency and severity due to sea level rise. Predicting floods in coastal cities can be difficult due to the number of environmental and geographic factors which can influence flooding events. Built stormwater infrastructure and irregular urban landscapes add further complexity. This paper demonstrates the use of machine learning algorithms in predicting street flood occurrence in an urban coastal setting. The model is trained and evaluated using data from Norfolk, Virginia USA from September 2010 - October 2016. Rainfall, tide levels, water table levels, and wind conditions are used as input variables. Street flooding reports made by city workers after named and unnamed storm events, ranging from 1-159 reports per event, are the model output. Results show that Random Forest provides predictive power in estimating the number of flood occurrences given a set of environmental conditions with an out-of-bag root mean squared error of 4.3 flood reports and a mean absolute error of 0.82 flood reports. The Random Forest algorithm performed much better than Poisson regression. From the Random Forest model, total daily rainfall was by far the most important factor in flood occurrence prediction, followed by daily low tide and daily higher high tide. The model demonstrated here could be used to predict flood severity based on forecast rainfall and tide conditions and could be further enhanced using more complete street flooding data for model training.

  12. Genetic algorithms applied to nonlinear and complex domains; TOPICAL

    International Nuclear Information System (INIS)

    Barash, D; Woodin, A E

    1999-01-01

    The dissertation, titled ''Genetic Algorithms Applied to Nonlinear and Complex Domains'', describes and then applies a new class of powerful search algorithms (GAS) to certain domains. GAS are capable of solving complex and nonlinear problems where many parameters interact to produce a ''final'' result such as the optimization of the laser pulse in the interaction of an atom with an intense laser field. GAS can very efficiently locate the global maximum by searching parameter space in problems which are unsuitable for a search using traditional methods. In particular, the dissertation contains new scientific findings in two areas. First, the dissertation examines the interaction of an ultra-intense short laser pulse with atoms. GAS are used to find the optimal frequency for stabilizing atoms in the ionization process. This leads to a new theoretical formulation, to explain what is happening during the ionization process and how the electron is responding to finite (real-life) laser pulse shapes. It is shown that the dynamics of the process can be very sensitive to the ramp of the pulse at high frequencies. The new theory which is formulated, also uses a novel concept (known as the (t,t') method) to numerically solve the time-dependent Schrodinger equation Second, the dissertation also examines the use of GAS in modeling decision making problems. It compares GAS with traditional techniques to solve a class of problems known as Markov Decision Processes. The conclusion of the dissertation should give a clear idea of where GAS are applicable, especially in the physical sciences, in problems which are nonlinear and complex, i.e. difficult to analyze by other means

  13. Genetic algorithms applied to nonlinear and complex domains

    International Nuclear Information System (INIS)

    Barash, D; Woodin, A E

    1999-01-01

    The dissertation, titled ''Genetic Algorithms Applied to Nonlinear and Complex Domains'', describes and then applies a new class of powerful search algorithms (GAS) to certain domains. GAS are capable of solving complex and nonlinear problems where many parameters interact to produce a ''final'' result such as the optimization of the laser pulse in the interaction of an atom with an intense laser field. GAS can very efficiently locate the global maximum by searching parameter space in problems which are unsuitable for a search using traditional methods. In particular, the dissertation contains new scientific findings in two areas. First, the dissertation examines the interaction of an ultra-intense short laser pulse with atoms. GAS are used to find the optimal frequency for stabilizing atoms in the ionization process. This leads to a new theoretical formulation, to explain what is happening during the ionization process and how the electron is responding to finite (real-life) laser pulse shapes. It is shown that the dynamics of the process can be very sensitive to the ramp of the pulse at high frequencies. The new theory which is formulated, also uses a novel concept (known as the (t,t') method) to numerically solve the time-dependent Schrodinger equation Second, the dissertation also examines the use of GAS in modeling decision making problems. It compares GAS with traditional techniques to solve a class of problems known as Markov Decision Processes. The conclusion of the dissertation should give a clear idea of where GAS are applicable, especially in the physical sciences, in problems which are nonlinear and complex, i.e. difficult to analyze by other means

  14. Optimized hyperspectral band selection using hybrid genetic algorithm and gravitational search algorithm

    Science.gov (United States)

    Zhang, Aizhu; Sun, Genyun; Wang, Zhenjie

    2015-12-01

    The serious information redundancy in hyperspectral images (HIs) cannot contribute to the data analysis accuracy, instead it require expensive computational resources. Consequently, to identify the most useful and valuable information from the HIs, thereby improve the accuracy of data analysis, this paper proposed a novel hyperspectral band selection method using the hybrid genetic algorithm and gravitational search algorithm (GA-GSA). In the proposed method, the GA-GSA is mapped to the binary space at first. Then, the accuracy of the support vector machine (SVM) classifier and the number of selected spectral bands are utilized to measure the discriminative capability of the band subset. Finally, the band subset with the smallest number of spectral bands as well as covers the most useful and valuable information is obtained. To verify the effectiveness of the proposed method, studies conducted on an AVIRIS image against two recently proposed state-of-the-art GSA variants are presented. The experimental results revealed the superiority of the proposed method and indicated that the method can indeed considerably reduce data storage costs and efficiently identify the band subset with stable and high classification precision.

  15. Reliability Based Spare Parts Management Using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Rahul Upadhyay

    2015-08-01

    Full Text Available Effective and efficient inventory management is the key to the economic sustainability of capital intensive modern industries. Inventory grows exponentially with complexity and size of the equipment fleet. Substantial amount of capital is required for maintaining an inventory and therefore its optimization is beneficial for smooth operation of the project at minimum cost of inventory. The size and hence the cost of the inventory is influenced by a large no of factors. This makes the optimization problem complex. This work presents a model to solve the problem of optimization of spare parts inventory. The novelty of this study lies with the fact that the developed method could tackle not only the artificial test case but also a real-world industrial problem. Various investigators developed several methods and semi-analytical tools for obtaining optimum solutions for this problem. In this study non-traditional optimization tool namely genetic algorithms GA are utilized. Apart from this Coxs regression analysis is also used to incorporate the effect of some environmental factors on the demand of spares. It shows the efficacy of the applicability of non-traditional optimization tool like GA to solve these problems. This research illustrates the proposed model with the analysis of data taken from a fleet of dumper operated in a large surface coal mine. The optimum time schedules so suggested by this GA-based model are found to be cost effective. A sensitivity analysis is also conducted for this industrial problem. Objective function is developed and the factors like the effect of season and production pressure overloading towards financial year-ending is included in the equations. Statistical analysis of the collected operational and performance data were carried out with the help of Easy-Fit Ver-5.5.The analysis gives the shape and scale parameter of theoretical Weibull distribution. The Coxs regression coefficient corresponding to excessive loading

  16. Applications of hybrid genetic algorithms in seismic tomography

    Science.gov (United States)

    Soupios, Pantelis; Akca, Irfan; Mpogiatzis, Petros; Basokur, Ahmet T.; Papazachos, Constantinos

    2011-11-01

    Almost all earth sciences inverse problems are nonlinear and involve a large number of unknown parameters, making the application of analytical inversion methods quite restrictive. In practice, most analytical methods are local in nature and rely on a linearized form of the problem equations, adopting an iterative procedure which typically employs partial derivatives in order to optimize the starting (initial) model by minimizing a misfit (penalty) function. Unfortunately, especially for highly non-linear cases, the final model strongly depends on the initial model, hence it is prone to solution-entrapment in local minima of the misfit function, while the derivative calculation is often computationally inefficient and creates instabilities when numerical approximations are used. An alternative is to employ global techniques which do not rely on partial derivatives, are independent of the misfit form and are computationally robust. Such methods employ pseudo-randomly generated models (sampling an appropriately selected section of the model space) which are assessed in terms of their data-fit. A typical example is the class of methods known as genetic algorithms (GA), which achieves the aforementioned approximation through model representation and manipulations, and has attracted the attention of the earth sciences community during the last decade, with several applications already presented for several geophysical problems. In this paper, we examine the efficiency of the combination of the typical regularized least-squares and genetic methods for a typical seismic tomography problem. The proposed approach combines a local (LOM) and a global (GOM) optimization method, in an attempt to overcome the limitations of each individual approach, such as local minima and slow convergence, respectively. The potential of both optimization methods is tested and compared, both independently and jointly, using the several test models and synthetic refraction travel-time date sets

  17. Optimization Route of Food Logistics Distribution Based on Genetic and Graph Cluster Scheme Algorithm

    OpenAIRE

    Jing Chen

    2015-01-01

    This study takes the concept of food logistics distribution as the breakthrough point, by means of the aim of optimization of food logistics distribution routes and analysis of the optimization model of food logistics route, as well as the interpretation of the genetic algorithm, it discusses the optimization of food logistics distribution route based on genetic and cluster scheme algorithm.

  18. Genetic algorithms for adaptive real-time control in space systems

    Science.gov (United States)

    Vanderzijp, J.; Choudry, A.

    1988-01-01

    Genetic Algorithms that are used for learning as one way to control the combinational explosion associated with the generation of new rules are discussed. The Genetic Algorithm approach tends to work best when it can be applied to a domain independent knowledge representation. Applications to real time control in space systems are discussed.

  19. Do Staphylococcus epidermidis Genetic Clusters Predict Isolation Sources?

    Science.gov (United States)

    Tolo, Isaiah; Thomas, Jonathan C.; Fischer, Rebecca S. B.; Brown, Eric L.; Gray, Barry M.

    2016-01-01

    Staphylococcus epidermidis is a ubiquitous colonizer of human skin and a common cause of medical device-associated infections. The extent to which the population genetic structure of S. epidermidis distinguishes commensal from pathogenic isolates is unclear. Previously, Bayesian clustering of 437 multilocus sequence types (STs) in the international database revealed a population structure of six genetic clusters (GCs) that may reflect the species' ecology. Here, we first verified the presence of six GCs, including two (GC3 and GC5) with significant admixture, in an updated database of 578 STs. Next, a single nucleotide polymorphism (SNP) assay was developed that accurately assigned 545 (94%) of 578 STs to GCs. Finally, the hypothesis that GCs could distinguish isolation sources was tested by SNP typing and GC assignment of 154 isolates from hospital patients with bacteremia and those with blood culture contaminants and from nonhospital carriage. GC5 was isolated almost exclusively from hospital sources. GC1 and GC6 were isolated from all sources but were overrepresented in isolates from nonhospital and infection sources, respectively. GC2, GC3, and GC4 were relatively rare in this collection. No association was detected between fdh-positive isolates (GC2 and GC4) and nonhospital sources. Using a machine learning algorithm, GCs predicted hospital and nonhospital sources with 80% accuracy and predicted infection and contaminant sources with 45% accuracy, which was comparable to the results seen with a combination of five genetic markers (icaA, IS256, sesD [bhp], mecA, and arginine catabolic mobile element [ACME]). Thus, analysis of population structure with subgenomic data shows the distinction of hospital and nonhospital sources and the near-inseparability of sources within a hospital. PMID:27076664

  20. A modified genetic algorithm with fuzzy roulette wheel selection for job-shop scheduling problems

    Science.gov (United States)

    Thammano, Arit; Teekeng, Wannaporn

    2015-05-01

    The job-shop scheduling problem is one of the most difficult production planning problems. Since it is in the NP-hard class, a recent trend in solving the job-shop scheduling problem is shifting towards the use of heuristic and metaheuristic algorithms. This paper proposes a novel metaheuristic algorithm, which is a modification of the genetic algorithm. This proposed algorithm introduces two new concepts to the standard genetic algorithm: (1) fuzzy roulette wheel selection and (2) the mutation operation with tabu list. The proposed algorithm has been evaluated and compared with several state-of-the-art algorithms in the literature. The experimental results on 53 JSSPs show that the proposed algorithm is very effective in solving the combinatorial optimization problems. It outperforms all state-of-the-art algorithms on all benchmark problems in terms of the ability to achieve the optimal solution and the computational time.

  1. Steam condenser optimization using Real-parameter Genetic Algorithm for Prototype Fast Breeder Reactor

    International Nuclear Information System (INIS)

    Jayalal, M.L.; Kumar, L. Satish; Jehadeesan, R.; Rajeswari, S.; Satya Murty, S.A.V.; Balasubramaniyan, V.; Chetal, S.C.

    2011-01-01

    Highlights: → We model design optimization of a vital reactor component using Genetic Algorithm. → Real-parameter Genetic Algorithm is used for steam condenser optimization study. → Comparison analysis done with various Genetic Algorithm related mechanisms. → The results obtained are validated with the reference study results. - Abstract: This work explores the use of Real-parameter Genetic Algorithm and analyses its performance in the steam condenser (or Circulating Water System) optimization study of a 500 MW fast breeder nuclear reactor. Choice of optimum design parameters for condenser for a power plant from among a large number of technically viable combination is a complex task. This is primarily due to the conflicting nature of the economic implications of the different system parameters for maximizing the capitalized profit. In order to find the optimum design parameters a Real-parameter Genetic Algorithm model is developed and applied. The results obtained are validated with the reference study results.

  2. Steam condenser optimization using Real-parameter Genetic Algorithm for Prototype Fast Breeder Reactor

    Energy Technology Data Exchange (ETDEWEB)

    Jayalal, M.L., E-mail: jayalal@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Kumar, L. Satish, E-mail: satish@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Jehadeesan, R., E-mail: jeha@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Rajeswari, S., E-mail: raj@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Satya Murty, S.A.V., E-mail: satya@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Balasubramaniyan, V.; Chetal, S.C. [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India)

    2011-10-15

    Highlights: > We model design optimization of a vital reactor component using Genetic Algorithm. > Real-parameter Genetic Algorithm is used for steam condenser optimization study. > Comparison analysis done with various Genetic Algorithm related mechanisms. > The results obtained are validated with the reference study results. - Abstract: This work explores the use of Real-parameter Genetic Algorithm and analyses its performance in the steam condenser (or Circulating Water System) optimization study of a 500 MW fast breeder nuclear reactor. Choice of optimum design parameters for condenser for a power plant from among a large number of technically viable combination is a complex task. This is primarily due to the conflicting nature of the economic implications of the different system parameters for maximizing the capitalized profit. In order to find the optimum design parameters a Real-parameter Genetic Algorithm model is developed and applied. The results obtained are validated with the reference study results.

  3. Simulating Evolution of Drosophila melanogaster Ebony Mutants Using a Genetic Algorithm

    DEFF Research Database (Denmark)

    Helles, Glennie

    2009-01-01

    Genetic algorithms are generally quite easy to understand and work with, and they are a popular choice in many cases. One area in which genetic algorithms are widely and successfully used is artificial life where they are used to simulate evolution of artificial creatures. However, despite...... their suggestive name, simplicity and popularity in artificial life, they do not seem to have gained a footing within the field of population genetics to simulate evolution of real organisms --- possibly because genetic algorithms are based on a rather crude simplification of the evolutionary mechanisms known...

  4. Genetic algorithms and genetic programming for multiscale modeling: Applications in materials science and chemistry and advances in scalability

    Science.gov (United States)

    Sastry, Kumara Narasimha

    2007-03-01

    Effective and efficient rnultiscale modeling is essential to advance both the science and synthesis in a, wide array of fields such as physics, chemistry, materials science; biology, biotechnology and pharmacology. This study investigates the efficacy and potential of rising genetic algorithms for rnultiscale materials modeling and addresses some of the challenges involved in designing competent algorithms that solve hard problems quickly, reliably and accurately. In particular, this thesis demonstrates the use of genetic algorithms (GAs) and genetic programming (GP) in multiscale modeling with the help of two non-trivial case studies in materials science and chemistry. The first case study explores the utility of genetic programming (GP) in multi-timescaling alloy kinetics simulations. In essence, GP is used to bridge molecular dynamics and kinetic Monte Carlo methods to span orders-of-magnitude in simulation time. Specifically, GP is used to regress symbolically an inline barrier function from a limited set of molecular dynamics simulations to enable kinetic Monte Carlo that simulate seconds of real time. Results on a non-trivial example of vacancy-assisted migration on a surface of a face-centered cubic (fcc) Copper-Cobalt (CuxCo 1-x) alloy show that GP predicts all barriers with 0.1% error from calculations for less than 3% of active configurations, independent of type of potentials used to obtain the learning set of barriers via molecular dynamics. The resulting method enables 2--9 orders-of-magnitude increase in real-time dynamics simulations taking 4--7 orders-of-magnitude less CPU time. The second case study presents the application of multiobjective genetic algorithms (MOGAs) in multiscaling quantum chemistry simulations. Specifically, MOGAs are used to bridge high-level quantum chemistry and semiempirical methods to provide accurate representation of complex molecular excited-state and ground-state behavior. Results on ethylene and benzene---two common

  5. Programmable genetic algorithm IP core for sensing and surveillance applications

    Science.gov (United States)

    Katkoori, Srinivas; Fernando, Pradeep; Sankaran, Hariharan; Stoica, Adrian; Keymeulen, Didier; Zebulum, Ricardo

    2009-05-01

    Real-time evolvable systems are possible with a hardware implementation of Genetic Algorithms (GA). We report the design of an IP core that implements a general purpose GA engine which has been successfully synthesized and verified on a Xilinx Virtex II Pro FPGA Device (XC2VP30). The placed and routed IP core has an area utilization of only 13% and clock speed of 50MHz. The GA core can be customized in terms of the population size, number of generations, cross-over and mutation rates, and the random number generator seed. The GA engine can be tailored to a given application by interfacing with the application specific fitness evaluation module as well as the required storage memory (to store the current and new populations). The core is soft in nature i.e., a gate-level netlist is provided which can be readily integrated with the user's system. The GA IP core can be readily used in FPGA based platforms for space and military applications (for e.g., surveillance, target tracking). The main advantages of the IP core are its programmability, small footprint, and low power consumption. Examples of concept systems in sensing and surveillance domains will be presented.

  6. Genetic Algorithm (GA)-Based Inclinometer Layout Optimization.

    Science.gov (United States)

    Liang, Weijie; Zhang, Ping; Chen, Xianping; Cai, Miao; Yang, Daoguo

    2015-04-17

    This paper presents numerical simulation results of an airflow inclinometer with sensitivity studies and thermal optimization of the printed circuit board (PCB) layout for an airflow inclinometer based on a genetic algorithm (GA). Due to the working principle of the gas sensor, the changes of the ambient temperature may cause dramatic voltage drifts of sensors. Therefore, eliminating the influence of the external environment for the airflow is essential for the performance and reliability of an airflow inclinometer. In this paper, the mechanism of an airflow inclinometer and the influence of different ambient temperatures on the sensitivity of the inclinometer will be examined by the ANSYS-FLOTRAN CFD program. The results show that with changes of the ambient temperature on the sensing element, the sensitivity of the airflow inclinometer is inversely proportional to the ambient temperature and decreases when the ambient temperature increases. GA is used to optimize the PCB thermal layout of the inclinometer. The finite-element simulation method (ANSYS) is introduced to simulate and verify the results of our optimal thermal layout, and the results indicate that the optimal PCB layout greatly improves (by more than 50%) the sensitivity of the inclinometer. The study may be useful in the design of PCB layouts that are related to sensitivity improvement of gas sensors.

  7. Optimization on robot arm machining by using genetic algorithms

    Science.gov (United States)

    Liu, Tung-Kuan; Chen, Chiu-Hung; Tsai, Shang-En

    2007-12-01

    In this study, an optimization problem on the robot arm machining is formulated and solved by using genetic algorithms (GAs). The proposed approach adopts direct kinematics model and utilizes GA's global search ability to find the optimum solution. The direct kinematics equations of the robot arm are formulated and can be used to compute the end-effector coordinates. Based on these, the objective of optimum machining along a set of points can be evolutionarily evaluated with the distance between machining points and end-effector positions. Besides, a 3D CAD application, CATIA, is used to build up the 3D models of the robot arm, work-pieces and their components. A simulated experiment in CATIA is used to verify the computation results first and a practical control on the robot arm through the RS232 port is also performed. From the results, this approach is proved to be robust and can be suitable for most machining needs when robot arms are adopted as the machining tools.

  8. Optimization of Nuclear Reactor power Distribution using Genetic Algorithm

    International Nuclear Information System (INIS)

    Kim, Hyu Chan

    1996-02-01

    The main purpose of study is to develop a computer code named as 'MGA-SCOUPE' which can determine an optimal fuel-loading pattern for the nuclear reactor. The developed code, MGA-SCOUPE, automatically lots of searches for the globally optimum solutions based upon the modified Genetic Algorithm(MGA). The optimization goal of the MGA-SCOUPE is (1) the minimization of the deviations in the power peaking factors both at BOC and EOC, and (2) the maximization of the average burnup ration at EOC of the total fuel assemblies. For the reactor core calculation module in the MGA-SCOUPE, the SCOUPE code was partially modified and used. It had been developed originally in MIT and has been used currently in Kyung Hee University. The application of the MGA-SCOUPE to KORI 4-4 Cycle Model show several satisfactory results. Among them, two dominant improvements compared with the SCOUPE code can be summarized as follow: - The MGA-SCOUPE removes the user-dependency problem of the SCOUPE in the optimal loading pattern searches. Therefore, the searching process in the MGA-SCOUPE can be easily automated. - The final fuel loading pattern obtained by the MGA-SCOUPE shows 25.8%, 18.7% reduced standard deviations of the power peaking factors both at BOC and EOC, and 45% increased avg. burnup ratio at EOC compare with those of the SCOUPE

  9. Speed Bump Detection Using Accelerometric Features: A Genetic Algorithm Approach.

    Science.gov (United States)

    Celaya-Padilla, Jose M; Galván-Tejada, Carlos E; López-Monteagudo, F E; Alonso-González, O; Moreno-Báez, Arturo; Martínez-Torteya, Antonio; Galván-Tejada, Jorge I; Arceo-Olague, Jose G; Luna-García, Huizilopoztli; Gamboa-Rosales, Hamurabi

    2018-02-03

    Among the current challenges of the Smart City, traffic management and maintenance are of utmost importance. Road surface monitoring is currently performed by humans, but the road surface condition is one of the main indicators of road quality, and it may drastically affect fuel consumption and the safety of both drivers and pedestrians. Abnormalities in the road, such as manholes and potholes, can cause accidents when not identified by the drivers. Furthermore, human-induced abnormalities, such as speed bumps, could also cause accidents. In addition, while said obstacles ought to be signalized according to specific road regulation, they are not always correctly labeled. Therefore, we developed a novel method for the detection of road abnormalities (i.e., speed bumps). This method makes use of a gyro, an accelerometer, and a GPS sensor mounted in a car. After having the vehicle cruise through several streets, data is retrieved from the sensors. Then, using a cross-validation strategy, a genetic algorithm is used to find a logistic model that accurately detects road abnormalities. The proposed model had an accuracy of 0.9714 in a blind evaluation, with a false positive rate smaller than 0.018, and an area under the receiver operating characteristic curve of 0.9784. This methodology has the potential to detect speed bumps in quasi real-time conditions, and can be used to construct a real-time surface monitoring system.

  10. Variable selection in Logistic regression model with genetic algorithm.

    Science.gov (United States)

    Zhang, Zhongheng; Trevino, Victor; Hoseini, Sayed Shahabuddin; Belciug, Smaranda; Boopathi, Arumugam Manivanna; Zhang, Ping; Gorunescu, Florin; Subha, Velappan; Dai, Songshi

    2018-02-01

    Variable or feature selection is one of the most important steps in model specification. Especially in the case of medical-decision making, the direct use of a medical database, without a previous analysis and preprocessing step, is often counterproductive. In this way, the variable selection represents the method of choosing the most relevant attributes from the database in order to build a robust learning models and, thus, to improve the performance of the models used in the decision process. In biomedical research, the purpose of variable selection is to select clinically important and statistically significant variables, while excluding unrelated or noise variables. A variety of methods exist for variable selection, but none of them is without limitations. For example, the stepwise approach, which is highly used, adds the best variable in each cycle generally producing an acceptable set of variables. Nevertheless, it is limited by the fact that it commonly trapped in local optima. The best subset approach can systematically search the entire covariate pattern space, but the solution pool can be extremely large with tens to hundreds of variables, which is the case in nowadays clinical data. Genetic algorithms (GA) are heuristic optimization approaches and can be used for variable selection in multivariable regression models. This tutorial paper aims to provide a step-by-step approach to the use of GA in variable selection. The R code provided in the text can be extended and adapted to other data analysis needs.

  11. Finding optimal vaccination strategies for pandemic influenza using genetic algorithms.

    Science.gov (United States)

    Patel, Rajan; Longini, Ira M; Halloran, M Elizabeth

    2005-05-21

    In the event of pandemic influenza, only limited supplies of vaccine may be available. We use stochastic epidemic simulations, genetic algorithms (GA), and random mutation hill climbing (RMHC) to find optimal vaccine distributions to minimize the number of illnesses or deaths in the population, given limited quantities of vaccine. Due to the non-linearity, complexity and stochasticity of the epidemic process, it is not possible to solve for optimal vaccine distributions mathematically. However, we use GA and RMHC to find near optimal vaccine distributions. We model an influenza pandemic that has age-specific illness attack rates similar to the Asian pandemic in 1957-1958 caused by influenza A(H2N2), as well as a distribution similar to the Hong Kong pandemic in 1968-1969 caused by influenza A(H3N2). We find the optimal vaccine distributions given that the number of doses is limited over the range of 10-90% of the population. While GA and RMHC work well in finding optimal vaccine distributions, GA is significantly more efficient than RMHC. We show that the optimal vaccine distribution found by GA and RMHC is up to 84% more effective than random mass vaccination in the mid range of vaccine availability. GA is generalizable to the optimization of stochastic model parameters for other infectious diseases and population structures.

  12. Designing optimal degradation tests via multi-objective genetic algorithms

    International Nuclear Information System (INIS)

    Marseguerra, Marzio; Zio, Enrico; Cipollone, Maurizio

    2003-01-01

    The experimental determination of the failure time probability distribution of highly reliable components, such as those used in nuclear and aerospace applications, is intrinsically difficult due to the lack, or scarce significance, of failure data which can be collected during the relatively short test periods. A possibility to overcome this difficulty is to resort to the so-called degradation tests, in which measurements of components' degradation are used to infer the failure time distribution. To design such tests, parameters like the number of tests to be run, their frequency and duration, must be set so as to obtain an accurate estimate of the distribution statistics, under the existing limitations of budget. The optimisation problem which results is a non-linear one. In this work, we propose a method, based on multi-objective genetic algorithms for determining the values of the test parameters which optimise both the accuracy in the estimate of the failure time distribution percentiles and the testing costs. The method has been validated on a degradation model of literature

  13. Alternatives and challenges in optimizing industrial safety using genetic algorithms

    International Nuclear Information System (INIS)

    Martorell, Sebastian; Sanchez, Ana; Carlos, Sofia; Serradell, Vicente

    2004-01-01

    Safety (S) improvement of industrial installations leans on the optimal allocation of designs that use more reliable equipment and testing and maintenance activities to assure a high level of reliability, availability and maintainability (RAM) for their safety-related systems. However, this also requires assigning a certain amount of resources (C) that are usually limited. Therefore, the decision-maker in this context faces in general a multiple-objective optimization problem (MOP) based on RAMS+C criteria where the parameters of design, testing and maintenance act as decision variables. Solutions to the MOP can be obtained by solving the problem directly, or by transforming it into several single-objective problems. A general framework for such MOP based on RAMS+C criteria is proposed in this paper. Then, problem formulation and fundamentals of two major groups of resolution alternatives are presented. Next, both alternatives are implemented in this paper using genetic algorithms (GAs), named single-objective GA and multi-objective GA, respectively, which are then used in the case of application to solve the problem of testing and maintenance optimization based on unavailability and cost criteria. The results show the capabilities and limitations of both approaches. Based on them, future challenges are identified in this field and guidelines provided for further research

  14. Multi Objective Optimization Using Genetic Algorithm of a Pneumatic Connector

    Science.gov (United States)

    Salaam, HA; Taha, Zahari; Ya, TMYS Tuan

    2018-03-01

    The concept of sustainability was first introduced by Dr Harlem Brutland in the 1980’s promoting the need to preserve today’s natural environment for the sake of future generations. Based on this concept, John Elkington proposed an approach to measure sustainability known as Triple Bottom Line (TBL). There are three evaluation criteria’s involved in the TBL approach; namely economics, environmental integrity and social equity. In manufacturing industry the manufacturing costs measure the economic sustainability of a company in a long term. Environmental integrity is a measure of the impact of manufacturing activities on the environment. Social equity is complicated to evaluate; but when the focus is at the production floor level, the production operator health can be considered. In this paper, the TBL approach is applied in the manufacturing of a pneumatic nipple hose. The evaluation criteria used are manufacturing costs, environmental impact, ergonomics impact and also energy used for manufacturing. This study involves multi objective optimization by using genetic algorithm of several possible alternatives for material used in the manufacturing of the pneumatic nipple.

  15. Innovative applications of genetic algorithms to problems in accelerator physics

    Directory of Open Access Journals (Sweden)

    Alicia Hofler

    2013-01-01

    Full Text Available The genetic algorithm (GA is a powerful technique that implements the principles nature uses in biological evolution to optimize a multidimensional nonlinear problem. The GA works especially well for problems with a large number of local extrema, where traditional methods (such as conjugate gradient, steepest descent, and others fail or, at best, underperform. The field of accelerator physics, among others, abounds with problems which lend themselves to optimization via GAs. In this paper, we report on the successful application of GAs in several problems related to the existing Continuous Electron Beam Accelerator Facility nuclear physics machine, the proposed Medium-energy Electron-Ion Collider at Jefferson Lab, and a radio frequency gun-based injector. These encouraging results are a step forward in optimizing accelerator design and provide an impetus for application of GAs to other problems in the field. To that end, we discuss the details of the GAs used, include a newly devised enhancement which leads to improved convergence to the optimum, and make recommendations for future GA developments and accelerator applications.

  16. Trans gene regulation in adaptive evolution: a genetic algorithm model.

    Science.gov (United States)

    Behera, N; Nanjundiah, V

    1997-09-21

    This is a continuation of earlier studies on the evolution of infinite populations of haploid genotypes within a genetic algorithm framework. We had previously explored the evolutionary consequences of the existence of indeterminate-"plastic"-loci, where a plastic locus had a finite probability in each generation of functioning (being switched "on") or not functioning (being switched "off"). The relative probabilities of the two outcomes were assigned on a stochastic basis. The present paper examines what happens when the transition probabilities are biased by the presence of regulatory genes. We find that under certain conditions regulatory genes can improve the adaptation of the population and speed up the rate of evolution (on occasion at the cost of lowering the degree of adaptation). Also, the existence of regulatory loci potentiates selection in favour of plasticity. There is a synergistic effect of regulatory genes on plastic alleles: the frequency of such alleles increases when regulatory loci are present. Thus, phenotypic selection alone can be a potentiating factor in a favour of better adaptation. Copyright 1997 Academic Press Limited.

  17. An Adaptive Test Sheet Generation Mechanism Using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Huan-Yu Lin

    2012-01-01

    Full Text Available For test-sheet composition systems, it is important to adaptively compose test sheets with diverse conceptual scopes, discrimination and difficulty degrees to meet various assessment requirements during real learning situations. Computation time and item exposure rate also influence performance and item bank security. Therefore, this study proposes an Adaptive Test Sheet Generation (ATSG mechanism, where a Candidate Item Selection Strategy adaptively determines candidate test items and conceptual granularities according to desired conceptual scopes, and an Aggregate Objective Function applies Genetic Algorithm (GA to figure out the approximate solution of mixed integer programming problem for the test-sheet composition. Experimental results show that the ATSG mechanism can efficiently, precisely generate test sheets to meet the various assessment requirements than existing ones. Furthermore, according to experimental finding, Fractal Time Series approach can be applied to analyze the self-similarity characteristics of GA’s fitness scores for improving the quality of the test-sheet composition in the near future.

  18. Speed Bump Detection Using Accelerometric Features: A Genetic Algorithm Approach

    Directory of Open Access Journals (Sweden)

    Jose M. Celaya-Padilla

    2018-02-01

    Full Text Available Among the current challenges of the Smart City, traffic management and maintenance are of utmost importance. Road surface monitoring is currently performed by humans, but the road surface condition is one of the main indicators of road quality, and it may drastically affect fuel consumption and the safety of both drivers and pedestrians. Abnormalities in the road, such as manholes and potholes, can cause accidents when not identified by the drivers. Furthermore, human-induced abnormalities, such as speed bumps, could also cause accidents. In addition, while said obstacles ought to be signalized according to specific road regulation, they are not always correctly labeled. Therefore, we developed a novel method for the detection of road abnormalities (i.e., speed bumps. This method makes use of a gyro, an accelerometer, and a GPS sensor mounted in a car. After having the vehicle cruise through several streets, data is retrieved from the sensors. Then, using a cross-validation strategy, a genetic algorithm is used to find a logistic model that accurately detects road abnormalities. The proposed model had an accuracy of 0.9714 in a blind evaluation, with a false positive rate smaller than 0.018, and an area under the receiver operating characteristic curve of 0.9784. This methodology has the potential to detect speed bumps in quasi real-time conditions, and can be used to construct a real-time surface monitoring system.

  19. Optimizing Fukushima Emissions Through Pattern Matching and Genetic Algorithms

    Science.gov (United States)

    Lucas, D. D.; Simpson, M. D.; Philip, C. S.; Baskett, R.

    2017-12-01

    Hazardous conditions during the Fukushima Daiichi nuclear power plant (NPP) accident hindered direct observations of the emissions of radioactive materials into the atmosphere. A wide range of emissions are estimated from bottom-up studies using reactor inventories and top-down approaches based on inverse modeling. We present a new inverse modeling estimate of cesium-137 emitted from the Fukushima NPP. Our estimate considers weather uncertainty through a large ensemble of Weather Research and Forecasting model simulations and uses the FLEXPART atmospheric dispersion model to transport and deposit cesium. The simulations are constrained by observations of the spatial distribution of cumulative cesium deposited on the surface of Japan through April 2, 2012. Multiple spatial metrics are used to quantify differences between observed and simulated deposition patterns. In order to match the observed pattern, we use a multi-objective genetic algorithm to optimize the time-varying emissions. We find that large differences with published bottom-up estimates are required to explain the observations. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.

  20. Improved interpretation of satellite altimeter data using genetic algorithms

    Science.gov (United States)

    Messa, Kenneth; Lybanon, Matthew

    1992-01-01

    Genetic algorithms (GA) are optimization techniques that are based on the mechanics of evolution and natural selection. They take advantage of the power of cumulative selection, in which successive incremental improvements in a solution structure become the basis for continued development. A GA is an iterative procedure that maintains a 'population' of 'organisms' (candidate solutions). Through successive 'generations' (iterations) the population as a whole improves in simulation of Darwin's 'survival of the fittest'. GA's have been shown to be successful where noise significantly reduces the ability of other search techniques to work effectively. Satellite altimetry provides useful information about oceanographic phenomena. It provides rapid global coverage of the oceans and is not as severely hampered by cloud cover as infrared imagery. Despite these and other benefits, several factors lead to significant difficulty in interpretation. The GA approach to the improved interpretation of satellite data involves the representation of the ocean surface model as a string of parameters or coefficients from the model. The GA searches in parallel, a population of such representations (organisms) to obtain the individual that is best suited to 'survive', that is, the fittest as measured with respect to some 'fitness' function. The fittest organism is the one that best represents the ocean surface model with respect to the altimeter data.

  1. Optimal Intermittent Dose Schedules for Chemotherapy Using Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Nadia ALAM

    2013-08-01

    Full Text Available In this paper, a design method for optimal cancer chemotherapy schedules via genetic algorithm (GA is presented. The design targets the key objective of chemotherapy to minimize the size of cancer tumor after a predefined time with keeping toxic side effects in limit. This is a difficult target to achieve using conventional clinical methods due to poor therapeutic indices of existing anti-cancer drugs. Moreover, there are clinical limitations in treatment administration to maintain continuous treatment. Besides, carefully decided rest periods are recommended to for patient’s comfort. Three intermittent drug scheduling schemes are presented in this paper where GA is used to optimize the dose quantities and timings by satisfying several treatment constraints. All three schemes are found to be effective in total elimination of cancer tumor after an agreed treatment length. The number of cancer cells is found zero at the end of the treatment for all three cases with tolerable toxicity. Finally, two of the schemes, “Fixed interval variable dose (FIVD and “Periodic dose” that are periodic in characteristic have been emphasized due to their additional simplicity in administration along with friendliness to patients. responses to the designed treatment schedules. Therefore the proposed design method is capable of planning effective, simple, patient friendly and acceptable chemotherapy schedules.

  2. Solving fuzzy shortest path problem by genetic algorithm

    Science.gov (United States)

    Syarif, A.; Muludi, K.; Adrian, R.; Gen, M.

    2018-03-01

    Shortest Path Problem (SPP) is known as one of well-studied fields in the area Operations Research and Mathematical Optimization. It has been applied for many engineering and management designs. The objective is usually to determine path(s) in the network with minimum total cost or traveling time. In the past, the cost value for each arc was usually assigned or estimated as a deteministic value. For some specific real world applications, however, it is often difficult to determine the cost value properly. One way of handling such uncertainty in decision making is by introducing fuzzy approach. With this situation, it will become difficult to solve the problem optimally. This paper presents the investigations on the application of Genetic Algorithm (GA) to a new SPP model in which the cost values are represented as Triangular Fuzzy Number (TFN). We adopts the concept of ranking fuzzy numbers to determine how good the solutions. Here, by giving his/her degree value, the decision maker can determine the range of objective value. This would be very valuable for decision support system in the real world applications.Simulation experiments were carried out by modifying several test problems with 10-25 nodes. It is noted that the proposed approach is capable attaining a good solution with different degree of optimism for the tested problems.

  3. Route Selection with Unspecified Sites Using Knowledge Based Genetic Algorithm

    Science.gov (United States)

    Kanoh, Hitoshi; Nakamura, Nobuaki; Nakamura, Tomohiro

    This paper addresses the problem of selecting a route to a given destination that traverses several non-specific sites (e.g. a bank, a gas station) as requested by a driver. The proposed solution uses a genetic algorithm that includes viral infection. The method is to generate two populations of viruses as domain specific knowledge in addition to a population of routes. A part of an arterial road is regarded as a main virus, and a road that includes a site is regarded as a site virus. An infection occurs between two points common to a candidate route and the virus, and involves the substitution of the intersections carried by the virus for those on the existing candidate route. Crossover and infection determine the easiest-to-drive and quasi-shortest route through the objective landmarks. Experiments using actual road maps show that this infection-based mechanism is an effective way of solving the problem. Our strategy is general, and can be effectively used in other optimization problems.

  4. Optimizing SRF Gun Cavity Profiles in a Genetic Algorithm Framework

    International Nuclear Information System (INIS)

    Hofler, Alicia; Evtushenko, Pavel; Marhauser, Frank

    2009-01-01

    Automation of DC photoinjector designs using a genetic algorithm (GA) based optimization is an accepted practice in accelerator physics. Allowing the gun cavity field profile shape to be varied can extend the utility of this optimization methodology to superconducting and normal conducting radio frequency (SRF/RF) gun based injectors. Finding optimal field and cavity geometry configurations can provide guidance for cavity design choices and verify existing designs. We have considered two approaches for varying the electric field profile. The first is to determine the optimal field profile shape that should be used independent of the cavity geometry, and the other is to vary the geometry of the gun cavity structure to produce an optimal field profile. The first method can provide a theoretical optimal and can illuminate where possible gains can be made in field shaping. The second method can produce more realistically achievable designs that can be compared to existing designs. In this paper, we discuss the design and implementation for these two methods for generating field profiles for SRF/RF guns in a GA based injector optimization scheme and provide preliminary results.

  5. Ripple-Spreading Network Model Optimization by Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Xiao-Bing Hu

    2013-01-01

    Full Text Available Small-world and scale-free properties are widely acknowledged in many real-world complex network systems, and many network models have been developed to capture these network properties. The ripple-spreading network model (RSNM is a newly reported complex network model, which is inspired by the natural ripple-spreading phenomenon on clam water surface. The RSNM exhibits good potential for describing both spatial and temporal features in the development of many real-world networks where the influence of a few local events spreads out through nodes and then largely determines the final network topology. However, the relationships between ripple-spreading related parameters (RSRPs of RSNM and small-world and scale-free topologies are not as obvious or straightforward as in many other network models. This paper attempts to apply genetic algorithm (GA to tune the values of RSRPs, so that the RSNM may generate these two most important network topologies. The study demonstrates that, once RSRPs are properly tuned by GA, the RSNM is capable of generating both network topologies and therefore has a great flexibility to study many real-world complex network systems.

  6. Predictive Power Estimation Algorithm (PPEA--a new algorithm to reduce overfitting for genomic biomarker discovery.

    Directory of Open Access Journals (Sweden)

    Jiangang Liu

    Full Text Available Toxicogenomics promises to aid in predicting adverse effects, understanding the mechanisms of drug action or toxicity, and uncovering unexpected or secondary pharmacology. However, modeling adverse effects using high dimensional and high noise genomic data is prone to over-fitting. Models constructed from such data sets often consist of a large number of genes with no obvious functional relevance to the biological effect the model intends to predict that can make it challenging to interpret the modeling results. To address these issues, we developed a novel algorithm, Predictive Power Estimation Algorithm (PPEA, which estimates the predictive power of each individual transcript through an iterative two-way bootstrapping procedure. By repeatedly enforcing that the sample number is larger than the transcript number, in each iteration of modeling and testing, PPEA reduces the potential risk of overfitting. We show with three different cases studies that: (1 PPEA can quickly derive a reliable rank order of predictive power of individual transcripts in a relatively small number of iterations, (2 the top ranked transcripts tend to be functionally related to the phenotype they are intended to predict, (3 using only the most predictive top ranked transcripts greatly facilitates development of multiplex assay such as qRT-PCR as a biomarker, and (4 more importantly, we were able to demonstrate that a small number of genes identified from the top-ranked transcripts are highly predictive of phenotype as their expression changes distinguished adverse from nonadverse effects of compounds in completely independent tests. Thus, we believe that the PPEA model effectively addresses the over-fitting problem and can be used to facilitate genomic biomarker discovery for predictive toxicology and drug responses.

  7. New technique for global solar radiation forecasting by simulated annealing and genetic algorithms using

    International Nuclear Information System (INIS)

    Tolabi, H.B.; Ayob, S.M.

    2014-01-01

    In this paper, a novel approach based on simulated annealing algorithm as a meta-heuristic method is implemented in MATLAB software to estimate the monthly average daily global solar radiation on a horizontal surface for six different climate cities of Iran. A search method based on genetic algorithm is applied to accelerate problem solving. Results show that simulated annealing based on genetic algorithm search is a suitable method to find the global solar radiation. (author)

  8. Research and application of multi-agent genetic algorithm in tower defense game

    Science.gov (United States)

    Jin, Shaohua

    2018-04-01

    In this paper, a new multi-agent genetic algorithm based on orthogonal experiment is proposed, which is based on multi-agent system, genetic algorithm and orthogonal experimental design. The design of neighborhood competition operator, orthogonal crossover operator, Son and self-learning operator. The new algorithm is applied to mobile tower defense game, according to the characteristics of the game, the establishment of mathematical models, and finally increases the value of the game's monster.

  9. Incorporating functional inter-relationships into protein function prediction algorithms

    Directory of Open Access Journals (Sweden)

    Kumar Vipin

    2009-05-01

    Full Text Available Abstract Background Functional classification schemes (e.g. the Gene Ontology that serve as the basis for annotation efforts in several organisms are often the source of gold standard information for computational efforts at supervised protein function prediction. While successful function prediction algorithms have been developed, few previous efforts have utilized more than the protein-to-functional class label information provided by such knowledge bases. For instance, the Gene Ontology not only captures protein annotations to a set of functional classes, but it also arranges these classes in a DAG-based hierarchy that captures rich inter-relationships between different classes. These inter-relationships present both opportunities, such as the potential for additional training examples for small classes from larger related classes, and challenges, such as a harder to learn distinction between similar GO terms, for standard classification-based approaches. Results We propose a method to enhance the performance of classification-based protein function prediction algorithms by addressing the issue of using these interrelationships between functional classes constituting functional classification schemes. Using a standard measure for evaluating the semantic similarity between nodes in an ontology, we quantify and incorporate these inter-relationships into the k-nearest neighbor classifier. We present experiments on several large genomic data sets, each of which is used for the modeling and prediction of over hundred classes from the GO Biological Process ontology. The results show that this incorporation produces more accurate predictions for a large number of the functional classes considered, and also that the classes benefitted most by this approach are those containing the fewest members. In addition, we show how our proposed framework can be used for integrating information from the entire GO hierarchy for improving the accuracy of

  10. Study on the Method of Association Rules Mining Based on Genetic Algorithm and Application in Analysis of Seawater Samples

    Directory of Open Access Journals (Sweden)

    Qiuhong Sun

    2014-04-01

    Full Text Available Based on the data mining research, the data mining based on genetic algorithm method, the genetic algorithm is briefly introduced, while the genetic algorithm based on two important theories and theoretical templates principle implicit parallelism is also discussed. Focuses on the application of genetic algorithms for association rule mining method based on association rule mining, this paper proposes a genetic algorithm fitness function structure, data encoding, such as the title of the improvement program, in particular through the early issues study, proposed the improved adaptive Pc, Pm algorithm is applied to the genetic algorithm, thereby improving efficiency of the algorithm. Finally, a genetic algorithm based association rule mining algorithm, and be applied in sea water samples database in data mining and prove its effective.

  11. A controlled genetic algorithm by fuzzy logic and belief functions for job-shop scheduling.

    Science.gov (United States)

    Hajri, S; Liouane, N; Hammadi, S; Borne, P

    2000-01-01

    Most scheduling problems are highly complex combinatorial problems. However, stochastic methods such as genetic algorithm yield good solutions. In this paper, we present a controlled genetic algorithm (CGA) based on fuzzy logic and belief functions to solve job-shop scheduling problems. For better performance, we propose an efficient representational scheme, heuristic rules for creating the initial population, and a new methodology for mixing and computing genetic operator probabilities.

  12. Near-Optimal Resource Allocation in Cooperative Cellular Networks Using Genetic Algorithms

    OpenAIRE

    Luo, Zihan; Armour, Simon; McGeehan, Joe

    2015-01-01

    This paper shows how a genetic algorithm can be used as a method of obtaining the near-optimal solution of the resource block scheduling problem in a cooperative cellular network. An exhaustive search is initially implementedto guarantee that the optimal result, in terms of maximizing the bandwidth efficiency of the overall network, is found, and then the genetic algorithm with the properly selected termination conditions is used in the same network. The simulation results show that the genet...

  13. Optimal groundwater remediation using artificial neural networks and the genetic algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Rogers, Leah L. [Stanford Univ., CA (United States)

    1992-08-01

    An innovative computational approach for the optimization of groundwater remediation is presented which uses artificial neural networks (ANNs) and the genetic algorithm (GA). In this approach, the ANN is trained to predict an aspect of the outcome of a flow and transport simulation. Then the GA searches through realizations or patterns of pumping and uses the trained network to predict the outcome of the realizations. This approach has advantages of parallel processing of the groundwater simulations and the ability to ``recycle`` or reuse the base of knowledge formed by these simulations. These advantages offer reduction of computational burden of the groundwater simulations relative to a more conventional approach which uses nonlinear programming (NLP) with a quasi-newtonian search. Also the modular nature of this approach facilitates substitution of different groundwater simulation models.

  14. Optimal groundwater remediation using artificial neural networks and the genetic algorithm

    International Nuclear Information System (INIS)

    Rogers, L.L.

    1992-08-01

    An innovative computational approach for the optimization of groundwater remediation is presented which uses artificial neural networks (ANNs) and the genetic algorithm (GA). In this approach, the ANN is trained to predict an aspect of the outcome of a flow and transport simulation. Then the GA searches through realizations or patterns of pumping and uses the trained network to predict the outcome of the realizations. This approach has advantages of parallel processing of the groundwater simulations and the ability to ''recycle'' or reuse the base of knowledge formed by these simulations. These advantages offer reduction of computational burden of the groundwater simulations relative to a more conventional approach which uses nonlinear programming (NLP) with a quasi-newtonian search. Also the modular nature of this approach facilitates substitution of different groundwater simulation models

  15. Parameter identification of ZnO surge arrester models based on genetic algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Bayadi, Abdelhafid [Laboratoire d' Automatique de Setif, Departement d' Electrotechnique, Faculte des Sciences de l' Ingenieur, Universite Ferhat ABBAS de Setif, Route de Bejaia Setif 19000 (Algeria)

    2008-07-15

    The correct and adequate modelling of ZnO surge arresters characteristics is very important for insulation coordination studies and systems reliability. In this context many researchers addressed considerable efforts to the development of surge arresters models to reproduce the dynamic characteristics observed in their behaviour when subjected to fast front impulse currents. The difficulties with these models reside essentially in the calculation and the adjustment of their parameters. This paper proposes a new technique based on genetic algorithm to obtain the best possible series of parameter values of ZnO surge arresters models. The validity of the predicted parameters is then checked by comparing the predicted results with the experimental results available in the literature. Using the ATP-EMTP package, an application of the arrester model on network system studies is presented and discussed. (author)

  16. Chaos Time Series Prediction Based on Membrane Optimization Algorithms

    Directory of Open Access Journals (Sweden)

    Meng Li

    2015-01-01

    Full Text Available This paper puts forward a prediction model based on membrane computing optimization algorithm for chaos time series; the model optimizes simultaneously the parameters of phase space reconstruction (τ,m and least squares support vector machine (LS-SVM (γ,σ by using membrane computing optimization algorithm. It is an important basis for spectrum management to predict accurately the change trend of parameters in the electromagnetic environment, which can help decision makers to adopt an optimal action. Then, the model presented in this paper is used to forecast band occupancy rate of frequency modulation (FM broadcasting band and interphone band. To show the applicability and superiority of the proposed model, this paper will compare the forecast model presented in it with conventional similar models. The experimental results show that whether single-step prediction or multistep prediction, the proposed model performs best based on three error measures, namely, normalized mean square error (NMSE, root mean square error (RMSE, and mean absolute percentage error (MAPE.

  17. Classification and learning using genetic algorithms applications in Bioinformatics and Web Intelligence

    CERN Document Server

    Bandyopadhyay, Sanghamitra

    2007-01-01

    This book provides a unified framework that describes how genetic learning can be used to design pattern recognition and learning systems. It examines how a search technique, the genetic algorithm, can be used for pattern classification mainly through approximating decision boundaries. Coverage also demonstrates the effectiveness of the genetic classifiers vis-à-vis several widely used classifiers, including neural networks.

  18. Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction.

    Science.gov (United States)

    He, Dan; Kuhn, David; Parida, Laxmi

    2016-06-15

    Given a set of biallelic molecular markers, such as SNPs, with genotype values encoded numerically on a collection of plant, animal or human samples, the goal of genetic trait prediction is to predict the quantitative trait values by simultaneously modeling all marker effects. Genetic trait prediction is usually represented as linear regression models. In many cases, for the same set of samples and markers, multiple traits are observed. Some of these traits might be correlated with each other. Therefore, modeling all the multiple traits together may improve the prediction accuracy. In this work, we view the multitrait prediction problem from a machine learning angle: as either a multitask learning problem or a multiple output regression problem, depending on whether different traits share the same genotype matrix or not. We then adapted multitask learning algorithms and multiple output regression algorithms to solve the multitrait prediction problem. We proposed a few strategies to improve the least square error of the prediction from these algorithms. Our experiments show that modeling multiple traits together could improve the prediction accuracy for correlated traits. The programs we used are either public or directly from the referred authors, such as MALSAR (http://www.public.asu.edu/~jye02/Software/MALSAR/) package. The Avocado data set has not been published yet and is available upon request. dhe@us.ibm.com. © The Author 2016. Published by Oxford University Press.

  19. Procedural Generation of Levels with Controllable Difficulty for a Platform Game Using a Genetic Algorithm

    OpenAIRE

    Classon, Johan; Andersson, Viktor

    2016-01-01

    This thesis describes the implementation and evaluation of a genetic algorithm (GA) for procedurally generating levels with controllable difficulty for a motion-based 2D platform game. Manually creating content can be time-consuming, and it may be desirable to automate this process with an algorithm, using Procedural Content Generation (PCG). An algorithm was implemented and then refined with an iterative method by conducting user tests. The resulting algorithm is considered a success and sho...

  20. Predictability of Genetic Interactions from Functional Gene Modules

    Directory of Open Access Journals (Sweden)

    Jonathan H. Young

    2017-02-01

    Full Text Available Characterizing genetic interactions is crucial to understanding cellular and organismal response to gene-level perturbations. Such knowledge can inform the selection of candidate disease therapy targets, yet experimentally determining whether genes interact is technically nontrivial and time-consuming. High-fidelity prediction of different classes of genetic interactions in multiple organisms would substantially alleviate this experimental burden. Under the hypothesis that functionally related genes tend to share common genetic interaction partners, we evaluate a computational approach to predict genetic interactions in Homo sapiens, Drosophila melanogaster, and Saccharomyces cerevisiae. By leveraging knowledge of functional relationships between genes, we cross-validate predictions on known genetic interactions and observe high predictive power of multiple classes of genetic interactions in all three organisms. Additionally, our method suggests high-confidence candidate interaction pairs that can be directly experimentally tested. A web application is provided for users to query genes for predicted novel genetic interaction partners. Finally, by subsampling the known yeast genetic interaction network, we found that novel genetic interactions are predictable even when knowledge of currently known interactions is minimal.