A semi-experimental nodal synthesis method for the on-line reconstruction of three-dimensional neutron flux-shapes and reactivity. Final report

Energy Technology Data Exchange (ETDEWEB)

Jacqmin, Robert P. [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States)

1991-12-10

The safety and optimal performance of large, commercial, light-water reactors require the knowledge at all time of the neutron-flux distribution in the core. In principle, this information can be obtained by solving the time-dependent neutron diffusion equations. However, this approach is complicated and very expensive. Sufficiently accurate, real-time calculations (time scale of approximately one second) are not yet possible on desktop computers, even with fast-running, nodal kinetics codes. A semi-experimental, nodal synthesis method which avoids the solution of the time-dependent, neutron diffusion equations is described. The essential idea of this method is to approximate instantaneous nodal group-fluxes by a linear combination of K, precomputed, three-dimensional, static expansion-functions. The time-dependent coefficients of the combination are found from the requirement that the reconstructed flux-distribution agree in a least-squares sense with the readings of J (≥K) fixed, prompt-responding neutron-detectors. Possible numerical difficulties with the least-squares solution of the ill-conditioned, J-by-K system of equations are brought under complete control by the use of a singular-value-decomposition technique. This procedure amounts to the rearrangement of the original, linear combination of K expansion functions into an equivalent more convenient, linear combination of R (≤K) orthogonalized ``modes`` of decreasing magnitude. Exceedingly small modes are zeroed to eliminate any risk of roundoff-error amplification, and to assure consistency with the limited accuracy of the data. Additional modes are zeroed when it is desirable to limit the sensitivity of the results to measurement noise.

Testing an inversion method for estimating electron energy fluxes from all-sky camera images

Directory of Open Access Journals (Sweden)

N. Partamies

2004-06-01

Full Text Available An inversion method for reconstructing the precipitating electron energy flux from a set of multi-wavelength digital all-sky camera (ASC images has recently been developed by tomografia. Preliminary tests suggested that the inversion is able to reconstruct the position and energy characteristics of the aurora with reasonable accuracy. This study carries out a thorough testing of the method and a few improvements for its emission physics equations. We compared the precipitating electron energy fluxes as estimated by the inversion method to the energy flux data recorded by the Defense Meteorological Satellite Program (DMSP satellites during four passes over auroral structures. When the aurorae appear very close to the local zenith, the fluxes inverted from the blue (427.8nm filtered ASC images or blue and green line (557.7nm images together give the best agreement with the measured flux values. The fluxes inverted from green line images alone are clearly larger than the measured ones. Closer to the horizon the quality of the inversion results from blue images deteriorate to the level of the ones from green images. In addition to the satellite data, the precipitating electron energy fluxes were estimated from the electron density measurements by the EISCAT Svalbard Radar (ESR. These energy flux values were compared to the ones of the inversion method applied to over 100 ASC images recorded at the nearby ASC station in Longyearbyen. The energy fluxes deduced from these two types of data are in general of the same order of magnitude. In 35% of all of the blue and green image inversions the relative errors were less than 50% and in 90% of the blue and green image inversions less than 100%. This kind of systematic testing of the inversion method is the first step toward using all-sky camera images in the way in which global UV images have recently been used to estimate the energy fluxes. The advantages of ASCs, compared to the space-born imagers, are

Systematic homogenization and self-consistent flux and pin power reconstruction for nodal diffusion methods. 1: Diffusion equation-based theory

International Nuclear Information System (INIS)

Zhang, H.; Rizwan-uddin; Dorning, J.J.

1995-01-01

A diffusion equation-based systematic homogenization theory and a self-consistent dehomogenization theory for fuel assemblies have been developed for use with coarse-mesh nodal diffusion calculations of light water reactors. The theoretical development is based on a multiple-scales asymptotic expansion carried out through second order in a small parameter, the ratio of the average diffusion length to the reactor characteristic dimension. By starting from the neutron diffusion equation for a three-dimensional heterogeneous medium and introducing two spatial scales, the development systematically yields an assembly-homogenized global diffusion equation with self-consistent expressions for the assembly-homogenized diffusion tensor elements and cross sections and assembly-surface-flux discontinuity factors. The rector eigenvalue 1/k eff is shown to be obtained to the second order in the small parameter, and the heterogeneous diffusion theory flux is shown to be obtained to leading order in that parameter. The latter of these two results provides a natural procedure for the reconstruction of the local fluxes and the determination of pin powers, even though homogenized assemblies are used in the global nodal diffusion calculation

[Reconstructive methods after Fournier gangrene].

Science.gov (United States)

Wallner, C; Behr, B; Ring, A; Mikhail, B D; Lehnhardt, M; Daigeler, A

2016-04-01

Fournier's gangrene is a variant of the necrotizing fasciitis restricted to the perineal and genital region. It presents as an acute life-threatening disease and demands rapid surgical debridement, resulting in large soft tissue defects. Various reconstructive methods have to be applied to reconstitute functionality and aesthetics. The objective of this work is to identify different reconstructive methods in the literature and compare them to our current concepts for reconstructing defects caused by Fournier gangrene. Analysis of the current literature and our reconstructive methods on Fournier gangrene. The Fournier gangrene is an emergency requiring rapid, calculated antibiotic treatment and radical surgical debridement. After the acute phase of the disease, appropriate reconstructive methods are indicated. The planning of the reconstruction of the defect depends on many factors, especially functional and aesthetic demands. Scrotal reconstruction requires a higher aesthetic and functional reconstructive degree than perineal cutaneous wounds. In general, thorough wound hygiene, proper pre-operative planning, and careful consideration of the patient's demands are essential for successful reconstruction. In the literature, various methods for reconstruction after Fournier gangrene are described. Reconstruction with a flap is required for a good functional result in complex regions as the scrotum and penis, while cutaneous wounds can be managed through skin grafting. Patient compliance and tissue demand are crucial factors in the decision-making process.

Object oriented reconstruction software for the Instrumented Flux Return of BABAR

CERN Document Server

Nardo, E D; Lista, L

2001-01-01

BABAR experiment is the first High Energy Physics experiment to extensively use object oriented technology and the C++ programming language for online and offline software. Object orientation permits to reach a high level of flexibility and maintainability of the code, which is a key point in a large project with many developers. These goals are reached with the introduction of reusable code elements, with abstraction of code behaviours and polymorphism. Software design, before code implementation, is the key task that determines the achievement of such a goal. We present the experience with the application of object oriented technology and design patterns to the reconstruction software of the Instrumented Flux Return detector of BABAR experiment. The use of abstract interfaces improved the development of reconstruction code and permitted to flexibly apply modification to reconstruction strategies, and eventually to reduce the maintenance load. The experience during the last years of development is presented....

A Method to Reconstruct the Solar-Induced Canopy Fluorescence Spectrum from Hyperspectral Measurements

Directory of Open Access Journals (Sweden)

Feng Zhao

2014-10-01

Full Text Available A method for canopy Fluorescence Spectrum Reconstruction (FSR is proposed in this study, which can be used to retrieve the solar-induced canopy fluorescence spectrum over the whole chlorophyll fluorescence emission region from 640–850 nm. Firstly, the radiance of the solar-induced chlorophyll fluorescence (Fs at five absorption lines of the solar spectrum was retrieved by a Spectral Fitting Method (SFM. The Singular Vector Decomposition (SVD technique was then used to extract three basis spectra from a training dataset simulated by the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes. Finally, these basis spectra were linearly combined to reconstruct the Fs spectrum, and the coefficients of them were determined by Weighted Linear Least Squares (WLLS fitting with the five retrieved Fs values. Results for simulated datasets indicate that the FSR method could accurately reconstruct the Fs spectra from hyperspectral measurements acquired by instruments of high Spectral Resolution (SR and Signal to Noise Ratio (SNR. The FSR method was also applied to an experimental dataset acquired in a diurnal experiment. The diurnal change of the reconstructed Fs spectra shows that the Fs radiance around noon was higher than that in the morning and afternoon, which is consistent with former studies. Finally, the potential and limitations of this method are discussed.

Reconstructing 3D profiles of flux distribution in array of unshunted Josephson junctions from 2D scanning SQUID microscope images

International Nuclear Information System (INIS)

Nascimento, F.M.; Sergeenkov, S.; Araujo-Moreira, F.M.

2012-01-01

By using a specially designed algorithm (based on utilizing the so-called Hierarchical Data Format), we report on successful reconstruction of 3D profiles of local flux distribution within artificially prepared arrays of unshunted Nb-AlO x -Nb Josephson junctions from 2D surface images obtained via the scanning SQUID microscope. The analysis of the obtained results suggest that for large sweep areas, the local flux distribution significantly deviates from the conventional picture and exhibits a more complicated avalanche-type behavior with a prominent dendritic structure. -- Highlights: ► The penetration of external magnetic field into an array of Nb-AlO x -Nb Josephson junctions is studied. ► Using Scanning SQUID Microscope, 2D images of local flux distribution within array are obtained. ► Using specially designed pattern recognition algorithm, 3D flux profiles are reconstructed from 2D images.

New method for determining central axial orientation of flux rope embedded within current sheet using multipoint measurements

Science.gov (United States)

Li, ZhaoYu; Chen, Tao; Yan, GuangQing

2016-10-01

A new method for determining the central axial orientation of a two-dimensional coherent magnetic flux rope (MFR) via multipoint analysis of the magnetic-field structure is developed. The method is devised under the following geometrical assumptions: (1) on its cross section, the structure is left-right symmetric; (2) the projected structure velocity is vertical to the line of symmetry. The two conditions can be naturally satisfied for cylindrical MFRs and are expected to be satisfied for MFRs that are flattened within current sheets. The model test demonstrates that, for determining the axial orientation of such structures, the new method is more efficient and reliable than traditional techniques such as minimum-variance analysis of the magnetic field, Grad-Shafranov (GS) reconstruction, and the more recent method based on the cylindrically symmetric assumption. A total of five flux transfer events observed by Cluster are studied using the proposed approach, and the application results indicate that the observed structures, regardless of their actual physical properties, fit the assumed geometrical model well. For these events, the inferred axial orientations are all in excellent agreement with those obtained using the multi-GS reconstruction technique.

The Grad-Shafranov Reconstruction of Toroidal Magnetic Flux Ropes: Method Development and Benchmark Studies

Science.gov (United States)

Hu, Qiang

2017-09-01

We develop an approach of the Grad-Shafranov (GS) reconstruction for toroidal structures in space plasmas, based on in situ spacecraft measurements. The underlying theory is the GS equation that describes two-dimensional magnetohydrostatic equilibrium, as widely applied in fusion plasmas. The geometry is such that the arbitrary cross-section of the torus has rotational symmetry about the rotation axis, Z, with a major radius, r0. The magnetic field configuration is thus determined by a scalar flux function, Ψ, and a functional F that is a single-variable function of Ψ. The algorithm is implemented through a two-step approach: i) a trial-and-error process by minimizing the residue of the functional F(Ψ) to determine an optimal Z-axis orientation, and ii) for the chosen Z, a χ2 minimization process resulting in a range of r0. Benchmark studies of known analytic solutions to the toroidal GS equation with noise additions are presented to illustrate the two-step procedure and to demonstrate the performance of the numerical GS solver, separately. For the cases presented, the errors in Z and r0 are 9° and 22%, respectively, and the relative percent error in the numerical GS solutions is smaller than 10%. We also make public the computer codes for these implementations and benchmark studies.

High resolution x-ray CMT: Reconstruction methods

Energy Technology Data Exchange (ETDEWEB)

Brown, J.K.

1997-02-01

This paper qualitatively discusses the primary characteristics of methods for reconstructing tomographic images from a set of projections. These reconstruction methods can be categorized as either {open_quotes}analytic{close_quotes} or {open_quotes}iterative{close_quotes} techniques. Analytic algorithms are derived from the formal inversion of equations describing the imaging process, while iterative algorithms incorporate a model of the imaging process and provide a mechanism to iteratively improve image estimates. Analytic reconstruction algorithms are typically computationally more efficient than iterative methods; however, analytic algorithms are available for a relatively limited set of imaging geometries and situations. Thus, the framework of iterative reconstruction methods is better suited for high accuracy, tomographic reconstruction codes.

Evaluation of proxy-based millennial reconstruction methods

Energy Technology Data Exchange (ETDEWEB)

Lee, Terry C.K.; Tsao, Min [University of Victoria, Department of Mathematics and Statistics, Victoria, BC (Canada); Zwiers, Francis W. [Environment Canada, Climate Research Division, Toronto, ON (Canada)

2008-08-15

A range of existing statistical approaches for reconstructing historical temperature variations from proxy data are compared using both climate model data and real-world paleoclimate proxy data. We also propose a new method for reconstruction that is based on a state-space time series model and Kalman filter algorithm. The state-space modelling approach and the recently developed RegEM method generally perform better than their competitors when reconstructing interannual variations in Northern Hemispheric mean surface air temperature. On the other hand, a variety of methods are seen to perform well when reconstructing surface air temperature variability on decadal time scales. An advantage of the new method is that it can incorporate additional, non-temperature, information into the reconstruction, such as the estimated response to external forcing, thereby permitting a simultaneous reconstruction and detection analysis as well as future projection. An application of these extensions is also demonstrated in the paper. (orig.)

Reconstruction of recycling flux from synthetic camera images, evaluated for the Wendelstein 7-X startup limiter

Science.gov (United States)

Frerichs, H.; Effenberg, F.; Feng, Y.; Schmitz, O.; Stephey, L.; Reiter, D.; Börner, P.; The W7-X Team

2017-12-01

The interpretation of spectroscopic measurements in the edge region of high-temperature plasmas can be guided by modeling with the EMC3-EIRENE code. A versatile synthetic diagnostic module, initially developed for the generation of synthetic camera images, has been extended for the evaluation of the inverse problem in which the observable photon flux is related back to the originating particle flux (recycling). An application of this synthetic diagnostic to the startup phase (inboard) limiter in Wendelstein 7-X (W7-X) is presented, and reconstruction of recycling from synthetic observation of \\renewcommand{\

Crystal growth of emerald by flux method

International Nuclear Information System (INIS)

Inoue, Mikio; Narita, Eiichi; Okabe, Taijiro; Morishita, Toshihiko.

1979-01-01

Emerald crystals have been formed in two binary fluxes of Li 2 O-MoO 2 and Li 2 O-V 2 O 5 using the slow cooling method and the temperature gradient method under various conditions. In the flux of Li 2 O-MoO 3 carried out in the range of 2 -- 5 of molar ratios (MoO 3 /Li 2 O), emerald was crystallized in the temperature range from 750 to 950 0 C, and the suitable crystallization conditions were found to be the molar ratio of 3 -- 4 and the temperature about 900 0 C. In the flux of Li 2 O-V 2 O 5 carried out in the range of 1.7 -- 5 of molar ratios (V 2 O 5 /Li 2 O), emerald was crystallized in the temperature range from 900 to 1150 0 . The suitable crystals were obtained at the molar ratio of 3 and the temperature range of 1000 -- 1100 0 C. The crystallization temperature rised with an increase in the molar ratio of the both fluxes. The emeralds grown in two binary fluxes were transparent green, having the density of 2.68, the refractive index of 1.56, and the two distinct bands in the visible spectrum at 430 and 600nm. The emerald grown in Li 2 O-V 2 O 5 flux was more bluish green than that grown in Li 2 O-MoO 3 flux. The size of the spontaneously nucleated emerald grown in the former flux was larger than the latter, when crystallized by the slow cooling method. As for the solubility of beryl in the two fluxes, Li 2 O-V 2 O 5 flux was superior to Li 2 O-MoO 3 flux whose small solubility of SiO 2 caused an experimental problem to the temperature gradient method. The suitability of the two fluxes for the crystal growth of emerald by the flux method was discussed from the view point of various properties of above-mentioned two fluxes. (author)

Critical node treatment in the analytic function expansion method for Pin Power Reconstruction

International Nuclear Information System (INIS)

Gao, Z.; Xu, Y.; Downar, T.

2013-01-01

Pin Power Reconstruction (PPR) was implemented in PARCS using the eight term analytic function expansion method (AFEN). This method has been demonstrated to be both accurate and efficient. However, similar to all the methods involving analytic functions, such as the analytic node method (ANM) and AFEN for nodal solution, the use of AFEN for PPR also has potential numerical issue with critical nodes. The conventional analytic functions are trigonometric or hyperbolic sine or cosine functions with an angular frequency proportional to buckling. For a critic al node the buckling is zero and the sine functions becomes zero, and the cosine function become unity. In this case, the eight terms of the analytic functions are no longer distinguishable from ea ch other which makes their corresponding coefficients can no longer be determined uniquely. The mode flux distribution of critical node can be linear while the conventional analytic functions can only express a uniform distribution. If there is critical or near critical node in a plane, the reconstructed pin power distribution is often be shown negative or very large values using the conventional method. In this paper, we propose a new method to avoid the numerical problem wit h critical nodes which uses modified trigonometric or hyperbolic sine functions which are the ratio of trigonometric or hyperbolic sine and its angular frequency. If there are no critical or near critical nodes present, the new pin power reconstruction method with modified analytic functions are equivalent to the conventional analytic functions. The new method is demonstrated using the L336C5 benchmark problem. (authors)

Critical node treatment in the analytic function expansion method for Pin Power Reconstruction

Energy Technology Data Exchange (ETDEWEB)

Gao, Z. [Rice University, MS 318, 6100 Main Street, Houston, TX 77005 (United States); Xu, Y. [Argonne National Laboratory, 9700 South Case Ave., Argonne, IL 60439 (United States); Downar, T. [Department of Nuclear Engineering, University of Michigan, 2355 Bonisteel blvd., Ann Arbor, MI 48109 (United States)

2013-07-01

Pin Power Reconstruction (PPR) was implemented in PARCS using the eight term analytic function expansion method (AFEN). This method has been demonstrated to be both accurate and efficient. However, similar to all the methods involving analytic functions, such as the analytic node method (ANM) and AFEN for nodal solution, the use of AFEN for PPR also has potential numerical issue with critical nodes. The conventional analytic functions are trigonometric or hyperbolic sine or cosine functions with an angular frequency proportional to buckling. For a critic al node the buckling is zero and the sine functions becomes zero, and the cosine function become unity. In this case, the eight terms of the analytic functions are no longer distinguishable from ea ch other which makes their corresponding coefficients can no longer be determined uniquely. The mode flux distribution of critical node can be linear while the conventional analytic functions can only express a uniform distribution. If there is critical or near critical node in a plane, the reconstructed pin power distribution is often be shown negative or very large values using the conventional method. In this paper, we propose a new method to avoid the numerical problem wit h critical nodes which uses modified trigonometric or hyperbolic sine functions which are the ratio of trigonometric or hyperbolic sine and its angular frequency. If there are no critical or near critical nodes present, the new pin power reconstruction method with modified analytic functions are equivalent to the conventional analytic functions. The new method is demonstrated using the L336C5 benchmark problem. (authors)

Multicore Performance of Block Algebraic Iterative Reconstruction Methods

DEFF Research Database (Denmark)

Sørensen, Hans Henrik B.; Hansen, Per Christian

2014-01-01

Algebraic iterative methods are routinely used for solving the ill-posed sparse linear systems arising in tomographic image reconstruction. Here we consider the algebraic reconstruction technique (ART) and the simultaneous iterative reconstruction techniques (SIRT), both of which rely on semiconv......Algebraic iterative methods are routinely used for solving the ill-posed sparse linear systems arising in tomographic image reconstruction. Here we consider the algebraic reconstruction technique (ART) and the simultaneous iterative reconstruction techniques (SIRT), both of which rely...... on semiconvergence. Block versions of these methods, based on a partitioning of the linear system, are able to combine the fast semiconvergence of ART with the better multicore properties of SIRT. These block methods separate into two classes: those that, in each iteration, access the blocks in a sequential manner...... a fixed relaxation parameter in each method, namely, the one that leads to the fastest semiconvergence. Computational results show that for multicore computers, the sequential approach is preferable....

Upwind methods for the Baer–Nunziato equations and higher-order reconstruction using artificial viscosity

International Nuclear Information System (INIS)

Fraysse, F.; Redondo, C.; Rubio, G.; Valero, E.

2016-01-01

This article is devoted to the numerical discretisation of the hyperbolic two-phase flow model of Baer and Nunziato. A special attention is paid on the discretisation of intercell flux functions in the framework of Finite Volume and Discontinuous Galerkin approaches, where care has to be taken to efficiently approximate the non-conservative products inherent to the model equations. Various upwind approximate Riemann solvers have been tested on a bench of discontinuous test cases. New discretisation schemes are proposed in a Discontinuous Galerkin framework following the criterion of Abgrall and the path-conservative formalism. A stabilisation technique based on artificial viscosity is applied to the high-order Discontinuous Galerkin method and compared against classical TVD-MUSCL Finite Volume flux reconstruction.

Upwind methods for the Baer–Nunziato equations and higher-order reconstruction using artificial viscosity

Energy Technology Data Exchange (ETDEWEB)

Fraysse, F., E-mail: francois.fraysse@rs2n.eu [RS2N, St. Zacharie (France); E. T. S. de Ingeniería Aeronáutica y del Espacio, Universidad Politécnica de Madrid, Madrid (Spain); Redondo, C.; Rubio, G.; Valero, E. [E. T. S. de Ingeniería Aeronáutica y del Espacio, Universidad Politécnica de Madrid, Madrid (Spain)

2016-12-01

This article is devoted to the numerical discretisation of the hyperbolic two-phase flow model of Baer and Nunziato. A special attention is paid on the discretisation of intercell flux functions in the framework of Finite Volume and Discontinuous Galerkin approaches, where care has to be taken to efficiently approximate the non-conservative products inherent to the model equations. Various upwind approximate Riemann solvers have been tested on a bench of discontinuous test cases. New discretisation schemes are proposed in a Discontinuous Galerkin framework following the criterion of Abgrall and the path-conservative formalism. A stabilisation technique based on artificial viscosity is applied to the high-order Discontinuous Galerkin method and compared against classical TVD-MUSCL Finite Volume flux reconstruction.

Reconstruction and flux analysis of coupling between metabolic pathways of astrocytes and neurons: application to cerebral hypoxia

Directory of Open Access Journals (Sweden)

Akιn Ata

2007-12-01

Full Text Available Abstract Background It is a daunting task to identify all the metabolic pathways of brain energy metabolism and develop a dynamic simulation environment that will cover a time scale ranging from seconds to hours. To simplify this task and make it more practicable, we undertook stoichiometric modeling of brain energy metabolism with the major aim of including the main interacting pathways in and between astrocytes and neurons. Model The constructed model includes central metabolism (glycolysis, pentose phosphate pathway, TCA cycle, lipid metabolism, reactive oxygen species (ROS detoxification, amino acid metabolism (synthesis and catabolism, the well-known glutamate-glutamine cycle, other coupling reactions between astrocytes and neurons, and neurotransmitter metabolism. This is, to our knowledge, the most comprehensive attempt at stoichiometric modeling of brain metabolism to date in terms of its coverage of a wide range of metabolic pathways. We then attempted to model the basal physiological behaviour and hypoxic behaviour of the brain cells where astrocytes and neurons are tightly coupled. Results The reconstructed stoichiometric reaction model included 217 reactions (184 internal, 33 exchange and 216 metabolites (183 internal, 33 external distributed in and between astrocytes and neurons. Flux balance analysis (FBA techniques were applied to the reconstructed model to elucidate the underlying cellular principles of neuron-astrocyte coupling. Simulation of resting conditions under the constraints of maximization of glutamate/glutamine/GABA cycle fluxes between the two cell types with subsequent minimization of Euclidean norm of fluxes resulted in a flux distribution in accordance with literature-based findings. As a further validation of our model, the effect of oxygen deprivation (hypoxia on fluxes was simulated using an FBA-derivative approach, known as minimization of metabolic adjustment (MOMA. The results show the power of the

Equivalence between the Energy Stable Flux Reconstruction and Filtered Discontinuous Galerkin Schemes

Science.gov (United States)

Zwanenburg, Philip; Nadarajah, Siva

2016-02-01

The aim of this paper is to demonstrate the equivalence between filtered Discontinuous Galerkin (DG) schemes and the Energy Stable Flux Reconstruction (ESFR) schemes, expanding on previous demonstrations in 1D [1] and for straight-sided elements in 3D [2]. We first derive the DG and ESFR schemes in strong form and compare the respective flux penalization terms while highlighting the implications of the fundamental assumptions for stability in the ESFR formulations, notably that all ESFR scheme correction fields can be interpreted as modally filtered DG correction fields. We present the result in the general context of all higher dimensional curvilinear element formulations. Through a demonstration that there exists a weak form of the ESFR schemes which is both discretely and analytically equivalent to the strong form, we then extend the results obtained for the strong formulations to demonstrate that ESFR schemes can be interpreted as a DG scheme in weak form where discontinuous edge flux is substituted for numerical edge flux correction. Theoretical derivations are then verified with numerical results obtained from a 2D Euler testcase with curved boundaries. Given the current choice of high-order DG-type schemes and the question as to which might be best to use for a specific application, the main significance of this work is the bridge that it provides between them. Clearly outlining the similarities between the schemes results in the important conclusion that it is always less efficient to use ESFR schemes, as opposed to the weak DG scheme, when solving problems implicitly.

Phylogenetic reconstruction methods: an overview.

Science.gov (United States)

De Bruyn, Alexandre; Martin, Darren P; Lefeuvre, Pierre

2014-01-01

Initially designed to infer evolutionary relationships based on morphological and physiological characters, phylogenetic reconstruction methods have greatly benefited from recent developments in molecular biology and sequencing technologies with a number of powerful methods having been developed specifically to infer phylogenies from macromolecular data. This chapter, while presenting an overview of basic concepts and methods used in phylogenetic reconstruction, is primarily intended as a simplified step-by-step guide to the construction of phylogenetic trees from nucleotide sequences using fairly up-to-date maximum likelihood methods implemented in freely available computer programs. While the analysis of chloroplast sequences from various Vanilla species is used as an illustrative example, the techniques covered here are relevant to the comparative analysis of homologous sequences datasets sampled from any group of organisms.

Method for position emission mammography image reconstruction

Science.gov (United States)

Smith, Mark Frederick

2004-10-12

An image reconstruction method comprising accepting coincidence datat from either a data file or in real time from a pair of detector heads, culling event data that is outside a desired energy range, optionally saving the desired data for each detector position or for each pair of detector pixels on the two detector heads, and then reconstructing the image either by backprojection image reconstruction or by iterative image reconstruction. In the backprojection image reconstruction mode, rays are traced between centers of lines of response (LOR's), counts are then either allocated by nearest pixel interpolation or allocated by an overlap method and then corrected for geometric effects and attenuation and the data file updated. If the iterative image reconstruction option is selected, one implementation is to compute a grid Siddon retracing, and to perform maximum likelihood expectation maiximization (MLEM) computed by either: a) tracing parallel rays between subpixels on opposite detector heads; or b) tracing rays between randomized endpoint locations on opposite detector heads.

Class of reconstructed discontinuous Galerkin methods in computational fluid dynamics

International Nuclear Information System (INIS)

Luo, Hong; Xia, Yidong; Nourgaliev, Robert

2011-01-01

A class of reconstructed discontinuous Galerkin (DG) methods is presented to solve compressible flow problems on arbitrary grids. The idea is to combine the efficiency of the reconstruction methods in finite volume methods and the accuracy of the DG methods to obtain a better numerical algorithm in computational fluid dynamics. The beauty of the resulting reconstructed discontinuous Galerkin (RDG) methods is that they provide a unified formulation for both finite volume and DG methods, and contain both classical finite volume and standard DG methods as two special cases of the RDG methods, and thus allow for a direct efficiency comparison. Both Green-Gauss and least-squares reconstruction methods and a least-squares recovery method are presented to obtain a quadratic polynomial representation of the underlying linear discontinuous Galerkin solution on each cell via a so-called in-cell reconstruction process. The devised in-cell reconstruction is aimed to augment the accuracy of the discontinuous Galerkin method by increasing the order of the underlying polynomial solution. These three reconstructed discontinuous Galerkin methods are used to compute a variety of compressible flow problems on arbitrary meshes to assess their accuracy. The numerical experiments demonstrate that all three reconstructed discontinuous Galerkin methods can significantly improve the accuracy of the underlying second-order DG method, although the least-squares reconstructed DG method provides the best performance in terms of both accuracy, efficiency, and robustness. (author)

Reconstructing Heat Fluxes Over Lake Erie During the Lake Effect Snow Event of November 2014

Science.gov (United States)

Fitzpatrick, L.; Fujisaki-Manome, A.; Gronewold, A.; Anderson, E. J.; Spence, C.; Chen, J.; Shao, C.; Posselt, D. J.; Wright, D. M.; Lofgren, B. M.; Schwab, D. J.

2017-12-01

The extreme North American winter storm of November 2014 triggered a record lake effect snowfall (LES) event in southwest New York. This study examined the evaporation from Lake Erie during the record lake effect snowfall event, November 17th-20th, 2014, by reconstructing heat fluxes and evaporation rates over Lake Erie using the unstructured grid, Finite-Volume Community Ocean Model (FVCOM). Nine different model runs were conducted using combinations of three different flux algorithms: the Met Flux Algorithm (COARE), a method routinely used at NOAA's Great Lakes Environmental Research Laboratory (SOLAR), and the Los Alamos Sea Ice Model (CICE); and three different meteorological forcings: the Climate Forecast System version 2 Operational Analysis (CFSv2), Interpolated observations (Interp), and the High Resolution Rapid Refresh (HRRR). A few non-FVCOM model outputs were also included in the evaporation analysis from an atmospheric reanalysis (CFSv2) and the large lake thermodynamic model (LLTM). Model-simulated water temperature and meteorological forcing data (wind direction and air temperature) were validated with buoy data at three locations in Lake Erie. The simulated sensible and latent heat fluxes were validated with the eddy covariance measurements at two offshore sites; Long Point Lighthouse in north central Lake Erie and Toledo water crib intake in western Lake Erie. The evaluation showed a significant increase in heat fluxes over three days, with the peak on the 18th of November. Snow water equivalent data from the National Snow Analyses at the National Operational Hydrologic Remote Sensing Center showed a spike in water content on the 20th of November, two days after the peak heat fluxes. The ensemble runs presented a variation in spatial pattern of evaporation, lake-wide average evaporation, and resulting cooling of the lake. Overall, the evaporation tended to be larger in deep water than shallow water near the shore. The lake-wide average evaporations

Reconstruction of a ring applicator using CT imaging: impact of the reconstruction method and applicator orientation

International Nuclear Information System (INIS)

Hellebust, Taran Paulsen; Tanderup, Kari; Bergstrand, Eva Stabell; Knutsen, Bjoern Helge; Roeislien, Jo; Olsen, Dag Rune

2007-01-01

The purpose of this study is to investigate whether the method of applicator reconstruction and/or the applicator orientation influence the dose calculation to points around the applicator for brachytherapy of cervical cancer with CT-based treatment planning. A phantom, containing a fixed ring applicator set and six lead pellets representing dose points, was used. The phantom was CT scanned with the ring applicator at four different angles related to the image plane. In each scan the applicator was reconstructed by three methods: (1) direct reconstruction in each image (DR) (2) reconstruction in multiplanar reconstructed images (MPR) and (3) library plans, using pre-defined applicator geometry (LIB). The doses to the lead pellets were calculated. The relative standard deviation (SD) for all reconstruction methods was less than 3.7% in the dose points. The relative SD for the LIB method was significantly lower (p < 0.05) than for the DR and MPR methods for all but two points. All applicator orientations had similar dose calculation reproducibility. Using library plans for applicator reconstruction gives the most reproducible dose calculation. However, with restrictive guidelines for applicator reconstruction the uncertainties for all methods are low compared to other factors influencing the accuracy of brachytherapy

Using the SAND-II and MLM methods to reconstruct fast neutron spectra

International Nuclear Information System (INIS)

Bondars, Kh.Ya.; Kamnev, V.A.; Lapenas, A.A.; Troshin, V.S.

1981-01-01

The reconstruction of fast neutron spectra from measured reaction rates may be reduced to the solution of Fredholm's integral equation of the first kind. This problem falls in the category of incorrectly formulated problems, and so additional information is required concerning the unknown function i.e. concerning the differential energy dependence of the neutron, flux density sup(phi)(E). There are various methods for seeking a solution to the problem as formulated above. One of the best-known methods used in the USSR is the maximum likelihood method (MLM) (or directional difference method (DDM)), whereas SAND-II is commonly used abroad. The purpose of this paper is to compare the MLM and SAND-II methods, taking as an example the processing of measurement data which were obtained in the B-2 beam line at the BR-10 reactor in order to determine the composition of shielding for a fast reactor

Adaptive multiresolution method for MAP reconstruction in electron tomography

Energy Technology Data Exchange (ETDEWEB)

Acar, Erman, E-mail: erman.acar@tut.fi [Department of Signal Processing, Tampere University of Technology, P.O. Box 553, FI-33101 Tampere (Finland); BioMediTech, Tampere University of Technology, Biokatu 10, 33520 Tampere (Finland); Peltonen, Sari; Ruotsalainen, Ulla [Department of Signal Processing, Tampere University of Technology, P.O. Box 553, FI-33101 Tampere (Finland); BioMediTech, Tampere University of Technology, Biokatu 10, 33520 Tampere (Finland)

2016-11-15

3D image reconstruction with electron tomography holds problems due to the severely limited range of projection angles and low signal to noise ratio of the acquired projection images. The maximum a posteriori (MAP) reconstruction methods have been successful in compensating for the missing information and suppressing noise with their intrinsic regularization techniques. There are two major problems in MAP reconstruction methods: (1) selection of the regularization parameter that controls the balance between the data fidelity and the prior information, and (2) long computation time. One aim of this study is to provide an adaptive solution to the regularization parameter selection problem without having additional knowledge about the imaging environment and the sample. The other aim is to realize the reconstruction using sequences of resolution levels to shorten the computation time. The reconstructions were analyzed in terms of accuracy and computational efficiency using a simulated biological phantom and publically available experimental datasets of electron tomography. The numerical and visual evaluations of the experiments show that the adaptive multiresolution method can provide more accurate results than the weighted back projection (WBP), simultaneous iterative reconstruction technique (SIRT), and sequential MAP expectation maximization (sMAPEM) method. The method is superior to sMAPEM also in terms of computation time and usability since it can reconstruct 3D images significantly faster without requiring any parameter to be set by the user. - Highlights: • An adaptive multiresolution reconstruction method is introduced for electron tomography. • The method provides more accurate results than the conventional reconstruction methods. • The missing wedge and noise problems can be compensated by the method efficiently.

New weighting methods for phylogenetic tree reconstruction using multiple loci.

Science.gov (United States)

Misawa, Kazuharu; Tajima, Fumio

2012-08-01

Efficient determination of evolutionary distances is important for the correct reconstruction of phylogenetic trees. The performance of the pooled distance required for reconstructing a phylogenetic tree can be improved by applying large weights to appropriate distances for reconstructing phylogenetic trees and small weights to inappropriate distances. We developed two weighting methods, the modified Tajima-Takezaki method and the modified least-squares method, for reconstructing phylogenetic trees from multiple loci. By computer simulations, we found that both of the new methods were more efficient in reconstructing correct topologies than the no-weight method. Hence, we reconstructed hominoid phylogenetic trees from mitochondrial DNA using our new methods, and found that the levels of bootstrap support were significantly increased by the modified Tajima-Takezaki and by the modified least-squares method.

Accelerated gradient methods for total-variation-based CT image reconstruction

Energy Technology Data Exchange (ETDEWEB)

Joergensen, Jakob H.; Hansen, Per Christian [Technical Univ. of Denmark, Lyngby (Denmark). Dept. of Informatics and Mathematical Modeling; Jensen, Tobias L.; Jensen, Soeren H. [Aalborg Univ. (Denmark). Dept. of Electronic Systems; Sidky, Emil Y.; Pan, Xiaochuan [Chicago Univ., Chicago, IL (United States). Dept. of Radiology

2011-07-01

Total-variation (TV)-based CT image reconstruction has shown experimentally to be capable of producing accurate reconstructions from sparse-view data. In particular TV-based reconstruction is well suited for images with piecewise nearly constant regions. Computationally, however, TV-based reconstruction is demanding, especially for 3D imaging, and the reconstruction from clinical data sets is far from being close to real-time. This is undesirable from a clinical perspective, and thus there is an incentive to accelerate the solution of the underlying optimization problem. The TV reconstruction can in principle be found by any optimization method, but in practice the large scale of the systems arising in CT image reconstruction preclude the use of memory-intensive methods such as Newton's method. The simple gradient method has much lower memory requirements, but exhibits prohibitively slow convergence. In the present work we address the question of how to reduce the number of gradient method iterations needed to achieve a high-accuracy TV reconstruction. We consider the use of two accelerated gradient-based methods, GPBB and UPN, to solve the 3D-TV minimization problem in CT image reconstruction. The former incorporates several heuristics from the optimization literature such as Barzilai-Borwein (BB) step size selection and nonmonotone line search. The latter uses a cleverly chosen sequence of auxiliary points to achieve a better convergence rate. The methods are memory efficient and equipped with a stopping criterion to ensure that the TV reconstruction has indeed been found. An implementation of the methods (in C with interface to Matlab) is available for download from http://www2.imm.dtu.dk/~pch/TVReg/. We compare the proposed methods with the standard gradient method, applied to a 3D test problem with synthetic few-view data. We find experimentally that for realistic parameters the proposed methods significantly outperform the standard gradient method. (orig.)

New method for initial density reconstruction

Science.gov (United States)

Shi, Yanlong; Cautun, Marius; Li, Baojiu

2018-01-01

A theoretically interesting and practically important question in cosmology is the reconstruction of the initial density distribution provided a late-time density field. This is a long-standing question with a revived interest recently, especially in the context of optimally extracting the baryonic acoustic oscillation (BAO) signals from observed galaxy distributions. We present a new efficient method to carry out this reconstruction, which is based on numerical solutions to the nonlinear partial differential equation that governs the mapping between the initial Lagrangian and final Eulerian coordinates of particles in evolved density fields. This is motivated by numerical simulations of the quartic Galileon gravity model, which has similar equations that can be solved effectively by multigrid Gauss-Seidel relaxation. The method is based on mass conservation, and does not assume any specific cosmological model. Our test shows that it has a performance comparable to that of state-of-the-art algorithms that were very recently put forward in the literature, with the reconstructed density field over ˜80 % (50%) correlated with the initial condition at k ≲0.6 h /Mpc (1.0 h /Mpc ). With an example, we demonstrate that this method can significantly improve the accuracy of BAO reconstruction.

Anatomically-aided PET reconstruction using the kernel method.

Science.gov (United States)

Hutchcroft, Will; Wang, Guobao; Chen, Kevin T; Catana, Ciprian; Qi, Jinyi

2016-09-21

This paper extends the kernel method that was proposed previously for dynamic PET reconstruction, to incorporate anatomical side information into the PET reconstruction model. In contrast to existing methods that incorporate anatomical information using a penalized likelihood framework, the proposed method incorporates this information in the simpler maximum likelihood (ML) formulation and is amenable to ordered subsets. The new method also does not require any segmentation of the anatomical image to obtain edge information. We compare the kernel method with the Bowsher method for anatomically-aided PET image reconstruction through a simulated data set. Computer simulations demonstrate that the kernel method offers advantages over the Bowsher method in region of interest quantification. Additionally the kernel method is applied to a 3D patient data set. The kernel method results in reduced noise at a matched contrast level compared with the conventional ML expectation maximization algorithm.

ASME method for particle reconstruction

International Nuclear Information System (INIS)

Ierusalimov, A.P.

2009-01-01

The method of approximate solution of motion equation (ASME) was used to reconstruct the parameters for charged particles. It provides a good precision for momentum, angular and space parameters of particles in coordinate detectors. The application of the method for CBM, HADES and MPD/NICA setups is discussed

Choosing the best ancestral character state reconstruction method.

Science.gov (United States)

Royer-Carenzi, Manuela; Pontarotti, Pierre; Didier, Gilles

2013-03-01

Despite its intrinsic difficulty, ancestral character state reconstruction is an essential tool for testing evolutionary hypothesis. Two major classes of approaches to this question can be distinguished: parsimony- or likelihood-based approaches. We focus here on the second class of methods, more specifically on approaches based on continuous-time Markov modeling of character evolution. Among them, we consider the most-likely-ancestor reconstruction, the posterior-probability reconstruction, the likelihood-ratio method, and the Bayesian approach. We discuss and compare the above-mentioned methods over several phylogenetic trees, adding the maximum-parsimony method performance in the comparison. Under the assumption that the character evolves according a continuous-time Markov process, we compute and compare the expectations of success of each method for a broad range of model parameter values. Moreover, we show how the knowledge of the evolution model parameters allows to compute upper bounds of reconstruction performances, which are provided as references. The results of all these reconstruction methods are quite close one to another, and the expectations of success are not so far from their theoretical upper bounds. But the performance ranking heavily depends on the topology of the studied tree, on the ancestral node that is to be inferred and on the parameter values. Consequently, we propose a protocol providing for each parameter value the best method in terms of expectation of success, with regard to the phylogenetic tree and the ancestral node to infer. Copyright © 2012 Elsevier Inc. All rights reserved.

Methods and applications in high flux neutron imaging; Methoden und Anwendungen fuer bildgebende Verfahren mit hohen Neutronenfluessen

Energy Technology Data Exchange (ETDEWEB)

Ballhausen, H.

2007-02-07

This treatise develops new methods for high flux neutron radiography and high flux neutron tomography and describes some of their applications in actual experiments. Instead of single images, time series can be acquired with short exposure times due to the available high intensity. To best use the increased amount of information, new estimators are proposed, which extract accurate results from the recorded ensembles, even if the individual piece of data is very noisy and in addition severely affected by systematic errors such as an influence of gamma background radiation. The spatial resolution of neutron radiographies, usually limited by beam divergence and inherent resolution of the scintillator, can be significantly increased by scanning the sample with a pinhole-micro-collimator. This technique circumvents any limitations in present detector design and, due to the available high intensity, could be successfully tested. Imaging with scattered neutrons as opposed to conventional total attenuation based imaging determines separately the absorption and scattering cross sections within the sample. For the first time even coherent angle dependent scattering could be visualized space-resolved. New applications of high flux neutron imaging are presented, such as materials engineering experiments on innovative metal joints, time-resolved tomography on multilayer stacks of fuel cells under operation, and others. A new implementation of an algorithm for the algebraic reconstruction of tomography data executes even in case of missing information, such as limited angle tomography, and returns quantitative reconstructions. The setup of the world-leading high flux radiography and tomography facility at the Institut Laue-Langevin is presented. A comprehensive appendix covers the physical and technical foundations of neutron imaging. (orig.)

Advances in the Surface Renewal Flux Measurement Method

Science.gov (United States)

Shapland, T. M.; McElrone, A.; Paw U, K. T.; Snyder, R. L.

2011-12-01

The measurement of ecosystem-scale energy and mass fluxes between the planetary surface and the atmosphere is crucial for understanding geophysical processes. Surface renewal is a flux measurement technique based on analyzing the turbulent coherent structures that interact with the surface. It is a less expensive technique because it does not require fast-response velocity measurements, but only a fast-response scalar measurement. It is therefore also a useful tool for the study of the global cycling of trace gases. Currently, surface renewal requires calibration against another flux measurement technique, such as eddy covariance, to account for the linear bias of its measurements. We present two advances in the surface renewal theory and methodology that bring the technique closer to becoming a fully independent flux measurement method. The first advance develops the theory of turbulent coherent structure transport associated with the different scales of coherent structures. A novel method was developed for identifying the scalar change rate within structures at different scales. Our results suggest that for canopies less than one meter in height, the second smallest coherent structure scale dominates the energy and mass flux process. Using the method for resolving the scalar exchange rate of the second smallest coherent structure scale, calibration is unnecessary for surface renewal measurements over short canopies. This study forms the foundation for analysis over more complex surfaces. The second advance is a sensor frequency response correction for measuring the sensible heat flux via surface renewal. Inexpensive fine-wire thermocouples are frequently used to record high frequency temperature data in the surface renewal technique. The sensible heat flux is used in conjunction with net radiation and ground heat flux measurements to determine the latent heat flux as the energy balance residual. The robust thermocouples commonly used in field experiments

Assessing the accuracy of ancestral protein reconstruction methods.

Directory of Open Access Journals (Sweden)

Paul D Williams

2006-06-01

Full Text Available The phylogenetic inference of ancestral protein sequences is a powerful technique for the study of molecular evolution, but any conclusions drawn from such studies are only as good as the accuracy of the reconstruction method. Every inference method leads to errors in the ancestral protein sequence, resulting in potentially misleading estimates of the ancestral protein's properties. To assess the accuracy of ancestral protein reconstruction methods, we performed computational population evolution simulations featuring near-neutral evolution under purifying selection, speciation, and divergence using an off-lattice protein model where fitness depends on the ability to be stable in a specified target structure. We were thus able to compare the thermodynamic properties of the true ancestral sequences with the properties of "ancestral sequences" inferred by maximum parsimony, maximum likelihood, and Bayesian methods. Surprisingly, we found that methods such as maximum parsimony and maximum likelihood that reconstruct a "best guess" amino acid at each position overestimate thermostability, while a Bayesian method that sometimes chooses less-probable residues from the posterior probability distribution does not. Maximum likelihood and maximum parsimony apparently tend to eliminate variants at a position that are slightly detrimental to structural stability simply because such detrimental variants are less frequent. Other properties of ancestral proteins might be similarly overestimated. This suggests that ancestral reconstruction studies require greater care to come to credible conclusions regarding functional evolution. Inferred functional patterns that mimic reconstruction bias should be reevaluated.

Assessing the accuracy of ancestral protein reconstruction methods.

Science.gov (United States)

Williams, Paul D; Pollock, David D; Blackburne, Benjamin P; Goldstein, Richard A

2006-06-23

The phylogenetic inference of ancestral protein sequences is a powerful technique for the study of molecular evolution, but any conclusions drawn from such studies are only as good as the accuracy of the reconstruction method. Every inference method leads to errors in the ancestral protein sequence, resulting in potentially misleading estimates of the ancestral protein's properties. To assess the accuracy of ancestral protein reconstruction methods, we performed computational population evolution simulations featuring near-neutral evolution under purifying selection, speciation, and divergence using an off-lattice protein model where fitness depends on the ability to be stable in a specified target structure. We were thus able to compare the thermodynamic properties of the true ancestral sequences with the properties of "ancestral sequences" inferred by maximum parsimony, maximum likelihood, and Bayesian methods. Surprisingly, we found that methods such as maximum parsimony and maximum likelihood that reconstruct a "best guess" amino acid at each position overestimate thermostability, while a Bayesian method that sometimes chooses less-probable residues from the posterior probability distribution does not. Maximum likelihood and maximum parsimony apparently tend to eliminate variants at a position that are slightly detrimental to structural stability simply because such detrimental variants are less frequent. Other properties of ancestral proteins might be similarly overestimated. This suggests that ancestral reconstruction studies require greater care to come to credible conclusions regarding functional evolution. Inferred functional patterns that mimic reconstruction bias should be reevaluated.

An analytical spatial reconstruction algorithm for the SD-SGF-CN hybrid nodal method for one-speed X,Y-geometry SN eigenvalue problems

International Nuclear Information System (INIS)

Menezes, Welton Alves; Alves Filho, Hermes; Barros, Ricardo C.

2009-01-01

In this paper the X,Y-geometry SD-SGF-CN spectral nodal method, cf. spectral diamond-spectral Green's function-constant nodal, is used to determine the one-speed node-edge average angular fluxes in heterogeneous domains. This hybrid spectral nodal method uses the spectral diamond (SD) auxiliary equation for the multiplying regions and the spectral Green's function (SGF) auxiliary equation for the non-multiplying regions of the domain. Moreover, we consider constant approximations for the transverse-leakage terms in the transverse integrated S N nodal equations. We solve the SD-SGF-CN equations using the one-node block inversion (NBI) iterative scheme, which uses the most recent estimates available for the node-entering fluxes to evaluate the node-exiting fluxes in the directions that constitute the incoming fluxes for the adjacent node. Using these results, we offer an algorithm for analytical reconstruction of the coarse-mesh nodal solution within each spatial node, as localized numerical solutions are not generated by usual accurate nodal methods. Numerical results are presented to illustrate the accuracy of the present algorithm. (author)

AIR Tools - A MATLAB package of algebraic iterative reconstruction methods

DEFF Research Database (Denmark)

Hansen, Per Christian; Saxild-Hansen, Maria

2012-01-01

We present a MATLAB package with implementations of several algebraic iterative reconstruction methods for discretizations of inverse problems. These so-called row action methods rely on semi-convergence for achieving the necessary regularization of the problem. Two classes of methods are impleme......We present a MATLAB package with implementations of several algebraic iterative reconstruction methods for discretizations of inverse problems. These so-called row action methods rely on semi-convergence for achieving the necessary regularization of the problem. Two classes of methods...... are implemented: Algebraic Reconstruction Techniques (ART) and Simultaneous Iterative Reconstruction Techniques (SIRT). In addition we provide a few simplified test problems from medical and seismic tomography. For each iterative method, a number of strategies are available for choosing the relaxation parameter...

Research of ART method in CT image reconstruction

International Nuclear Information System (INIS)

Li Zhipeng; Cong Peng; Wu Haifeng

2005-01-01

This paper studied Algebraic Reconstruction Technique (ART) in CT image reconstruction. Discussed the ray number influence on image quality. And the adopting of smooth method got high quality CT image. (authors)

Assessing the Accuracy of Ancestral Protein Reconstruction Methods

OpenAIRE

Williams, Paul D; Pollock, David D; Blackburne, Benjamin P; Goldstein, Richard A

2006-01-01

The phylogenetic inference of ancestral protein sequences is a powerful technique for the study of molecular evolution, but any conclusions drawn from such studies are only as good as the accuracy of the reconstruction method. Every inference method leads to errors in the ancestral protein sequence, resulting in potentially misleading estimates of the ancestral protein's properties. To assess the accuracy of ancestral protein reconstruction methods, we performed computational population evolu...

Comparison of four surgical methods for eyebrow reconstruction

Directory of Open Access Journals (Sweden)

Omranifard Mahmood

2007-01-01

Full Text Available Background: The eyebrow plays an important role in facial harmony and eye protection. Eyebrows can be injured by burn, trauma, tumour, tattooing and alopecia. Eyebrow reconstructions have been done via several techniques. Here, our experience with a fairly new method for eyebrow reconstruction is presented. Materials and Methods: This is a descriptive-analytical study which was done on 76 patients at the Al-Zahra and Imam Mousa Kazem hospitals at Isfahan University of Medical University, Isfahan, Iran, from 1994 to 2004. Totally 86 eyebrows were reconstructed. All patients were examined before and after the operation. Methods which are commonly applied in eyebrow reconstruction are as follows: 1. Superficial Temporal Artery Flap (Island, 2. Interpolitation Scalp Flap, 3. Graft. Our method which is named Forehead Facial Island Flap with inferior pedicle provides an easier approach for the surgeon and more ideal hair growth direction for the patient. Results: Significantly lower rates of complication along with greater patient satisfaction were obtained with Forehead Facial Island Flap. Conclusions: According to the acquired results, this method seems to be more technically practical and aesthetically favourable when compared to others.

[Development and current situation of reconstruction methods following total sacrectomy].

Science.gov (United States)

Huang, Siyi; Ji, Tao; Guo, Wei

2018-05-01

To review the development of the reconstruction methods following total sacrectomy, and to provide reference for finding a better reconstruction method following total sacrectomy. The case reports and biomechanical and finite element studies of reconstruction following total sacrectomy at home and abroad were searched. Development and current situation were summarized. After developing for nearly 30 years, great progress has been made in the reconstruction concept and fixation techniques. The fixation methods can be summarized as the following three strategies: spinopelvic fixation (SPF), posterior pelvic ring fixation (PPRF), and anterior spinal column fixation (ASCF). SPF has undergone technical progress from intrapelvic rod and hook constructs to pedicle and iliac screw-rod systems. PPRF and ASCF could improve the stability of the reconstruction system. Reconstruction following total sacrectomy remains a challenge. Reconstruction combining SPF, PPRF, and ASCF is the developmental direction to achieve mechanical stability. How to gain biological fixation to improve the long-term stability is an urgent problem to be solved.

Matrix-based image reconstruction methods for tomography

International Nuclear Information System (INIS)

Llacer, J.; Meng, J.D.

1984-10-01

Matrix methods of image reconstruction have not been used, in general, because of the large size of practical matrices, ill condition upon inversion and the success of Fourier-based techniques. An exception is the work that has been done at the Lawrence Berkeley Laboratory for imaging with accelerated radioactive ions. An extension of that work into more general imaging problems shows that, with a correct formulation of the problem, positron tomography with ring geometries results in well behaved matrices which can be used for image reconstruction with no distortion of the point response in the field of view and flexibility in the design of the instrument. Maximum Likelihood Estimator methods of reconstruction, which use the system matrices tailored to specific instruments and do not need matrix inversion, are shown to result in good preliminary images. A parallel processing computer structure based on multiple inexpensive microprocessors is proposed as a system to implement the matrix-MLE methods. 14 references, 7 figures

Regional absolute conductivity reconstruction using projected current density in MREIT

International Nuclear Information System (INIS)

Sajib, Saurav Z K; Kim, Hyung Joong; Woo, Eung Je; Kwon, Oh In

2012-01-01

Magnetic resonance electrical impedance tomography (MREIT) is a non-invasive technique for imaging the internal conductivity distribution in tissue within an MRI scanner, utilizing the magnetic flux density, which is introduced when a current is injected into the tissue from external electrodes. This magnetic flux alters the MRI signal, so that appropriate reconstruction can provide a map of the additional z-component of the magnetic field (B z ) as well as the internal current density distribution that created it. To extract the internal electrical properties of the subject, including the conductivity and/or the current density distribution, MREIT techniques use the relationship between the external injection current and the z-component of the magnetic flux density B = (B x , B y , B z ). The tissue studied typically contains defective regions, regions with a low MRI signal and/or low MRI signal-to-noise-ratio, due to the low density of nuclear magnetic resonance spins, short T 2 or T* 2 relaxation times, as well as regions with very low electrical conductivity, through which very little current traverses. These defective regions provide noisy B z data, which can severely degrade the overall reconstructed conductivity distribution. Injecting two independent currents through surface electrodes, this paper proposes a new direct method to reconstruct a regional absolute isotropic conductivity distribution in a region of interest (ROI) while avoiding the defective regions. First, the proposed method reconstructs the contrast of conductivity using the transversal J-substitution algorithm, which blocks the propagation of severe accumulated noise from the defective region to the ROI. Second, the proposed method reconstructs the regional projected current density using the relationships between the internal current density, which stems from a current injection on the surface, and the measured B z data. Combining the contrast conductivity distribution in the entire imaging

A model for heliospheric flux-ropes

Science.gov (United States)

Nieves-Chinchilla, T.; Linton, M.; Vourlidas, A.; Hidalgo, M. A. U.

2017-12-01

This work is presents an analytical flux-rope model, which explores different levels of complexity starting from a circular-cylindrical geometry. The framework of this series of models was established by Nieves-Chinchilla et al. 2016 with the circular-cylindrical analytical flux rope model. The model attempts to describe the magnetic flux rope topology with distorted cross-section as a possible consequence of the interaction with the solar wind. In this model, the flux rope is completely described in a non-orthogonal geometry. The Maxwell equations are solved using tensor calculus consistent with the geometry chosen, invariance along the axial direction, and with the assumption of no radial current density. The model is generalized in terms of the radial and azimuthal dependence of the poloidal current density component and axial current density component. The misalignment between current density and magnetic field is studied in detail for several example profiles of the axial and poloidal current density components. This theoretical analysis provides a map of the force distribution inside of the flux-rope. For reconstruction of the heliospheric flux-ropes, the circular-cylindrical reconstruction technique has been adapted to the new geometry and applied to in situ ICMEs with a flux-rope entrained and tested with cases with clear in situ signatures of distortion. The model adds a piece in the puzzle of the physical-analytical representation of these magnetic structures that should be evaluated with the ultimate goal of reconciling in-situ reconstructions with imaging 3D remote sensing CME reconstructions. Other effects such as axial curvature and/or expansion could be incorporated in the future to fully understand the magnetic structure.

Quartet-based methods to reconstruct phylogenetic networks.

Science.gov (United States)

Yang, Jialiang; Grünewald, Stefan; Xu, Yifei; Wan, Xiu-Feng

2014-02-20

Phylogenetic networks are employed to visualize evolutionary relationships among a group of nucleotide sequences, genes or species when reticulate events like hybridization, recombination, reassortant and horizontal gene transfer are believed to be involved. In comparison to traditional distance-based methods, quartet-based methods consider more information in the reconstruction process and thus have the potential to be more accurate. We introduce QuartetSuite, which includes a set of new quartet-based methods, namely QuartetS, QuartetA, and QuartetM, to reconstruct phylogenetic networks from nucleotide sequences. We tested their performances and compared them with other popular methods on two simulated nucleotide sequence data sets: one generated from a tree topology and the other from a complicated evolutionary history containing three reticulate events. We further validated these methods to two real data sets: a bacterial data set consisting of seven concatenated genes of 36 bacterial species and an influenza data set related to recently emerging H7N9 low pathogenic avian influenza viruses in China. QuartetS, QuartetA, and QuartetM have the potential to accurately reconstruct evolutionary scenarios from simple branching trees to complicated networks containing many reticulate events. These methods could provide insights into the understanding of complicated biological evolutionary processes such as bacterial taxonomy and reassortant of influenza viruses.

How to choose methods for lake greenhouse gas flux measurements?

Science.gov (United States)

Bastviken, David

2017-04-01

Lake greenhouse gas (GHG) fluxes are increasingly recognized as important for lake ecosystems as well as for large scale carbon and GHG budgets. However, many of our flux estimates are uncertain and it can be discussed if the presently available data is representative for the systems studied or not. Data are also very limited for some important flux pathways. Hence, many ongoing efforts try to better constrain fluxes and understand flux regulation. A fundamental challenge towards improved knowledge and when starting new studies is what methods to choose. A variety of approaches to measure aquatic GHG exchange is used and data from different methods and methodological approaches have often been treated as equally valid to create large datasets for extrapolations and syntheses. However, data from different approaches may cover different flux pathways or spatio-temporal domains and are thus not always comparable. Method inter-comparisons and critical method evaluations addressing these issues are rare. Emerging efforts to organize systematic multi-lake monitoring networks for GHG fluxes leads to method choices that may set the foundation for decades of data generation and therefore require fundamental evaluation of different approaches. The method choices do not only regard the equipment but also for example consideration of overall measurement design and field approaches, relevant spatial and temporal resolution for different flux components, and accessory variables to measure. In addition, consideration of how to design monitoring approaches being affordable, suitable for widespread (global) use, and comparable across regions is needed. Inspired by discussions with Prof. Dr. Cristian Blodau during the EGU General Assembly 2016, this presentation aims to (1) illustrate fundamental pros and cons for a number of common methods, (2) show how common methodological approaches originally adapted for other environments can be improved for lake flux measurements, (3) suggest

Reconstruction of a ring applicator using CT imaging: impact of the reconstruction method and applicator orientation

DEFF Research Database (Denmark)

Hellebust, Taran Paulsen; Tanderup, Kari; Bergstrand, Eva Stabell

2007-01-01

in multiplanar reconstructed images (MPR) and (3) library plans, using pre-defined applicator geometry (LIB). The doses to the lead pellets were calculated. The relative standard deviation (SD) for all reconstruction methods was less than 3.7% in the dose points. The relative SD for the LIB method...

Blind compressed sensing image reconstruction based on alternating direction method

Science.gov (United States)

Liu, Qinan; Guo, Shuxu

2018-04-01

In order to solve the problem of how to reconstruct the original image under the condition of unknown sparse basis, this paper proposes an image reconstruction method based on blind compressed sensing model. In this model, the image signal is regarded as the product of a sparse coefficient matrix and a dictionary matrix. Based on the existing blind compressed sensing theory, the optimal solution is solved by the alternative minimization method. The proposed method solves the problem that the sparse basis in compressed sensing is difficult to represent, which restrains the noise and improves the quality of reconstructed image. This method ensures that the blind compressed sensing theory has a unique solution and can recover the reconstructed original image signal from a complex environment with a stronger self-adaptability. The experimental results show that the image reconstruction algorithm based on blind compressed sensing proposed in this paper can recover high quality image signals under the condition of under-sampling.

Apparatus and method for reconstructing data

International Nuclear Information System (INIS)

1981-01-01

A method and apparatus is described for constructing a two-dimensional picture of an object slice from linear projections of radiation not absorbed or scattered by the object, using convolution methods of data reconstruction, useful in the fields of medical radiology, microscopy, and non-destructive testing. (U.K.)

DG TOMO: A new method for tomographic reconstruction

International Nuclear Information System (INIS)

Freitas, D. de; Feschet, F.; Cachin, F.; Geissler, B.; Bapt, A.; Karidioula, I.; Martin, C.; Kelly, A.; Mestas, D.; Gerard, Y.; Reveilles, J.P.; Maublant, J.

2006-01-01

Aim: FBP and OSEM are the most popular tomographic reconstruction methods in scintigraphy. FBP is a simple method but artifacts of reconstruction are generated which corrections induce degradation of the spatial resolution. OSEM takes account of statistical fluctuations but noise strongly increases after a certain number of iterations. We compare a new method of tomographic reconstruction based on discrete geometry (DG TOMO) to FBP and OSEM. Materials and methods: Acquisitions were performed on a three-head gamma-camera (Philips) with a NEMA Phantom containing six spheres of sizes from 10 to 37 mm inner diameter, filled with around 325 MBq/l of technetium-99 m. The spheres were positioned in water containing 3 MBq/l of technetium-99 m. Acquisitions were realized during a 180 o -rotation around the phantom by 25-s steps. DG TOMO has been developed in our laboratory in order to minimize the number of projections at acquisition. Two tomographic reconstructions utilizing 32 and 16 projections with FBP, OSEM and DG TOMO were performed and transverse slices were compared. Results: FBP with 32 projections detects only the activity in the three largest spheres (diameter ≥22 mm). With 16 projections, the star effect is predominant and the contrast of the third sphere is very low. OSEM with 32 projections provides a better image but the three smallest spheres (diameter ≤17 mm) are difficult to distinguish. With 16 projections, the three smaller spheres are not detectable. The results of DG TOMO are similar to OSEM. Conclusion: Since the parameters of DG TOMO can be further optimized, this method appears as a promising alternative for tomoscintigraphy reconstruction

Apparatus and method for reconstructing data

International Nuclear Information System (INIS)

Pavkovich, J.M.

1977-01-01

The apparatus and method for reconstructing data are described. A fan beam of radiation is passed through an object, the beam lying in the same quasi-plane as the object slice to be examined. Radiation not absorbed in the object slice is recorded on oppositely situated detectors aligned with the source of radiation. Relative rotation is provided between the source-detector configuration and the object. Reconstruction means are coupled to the detector means, and may comprise a general purpose computer, a special purpose computer, and control logic for interfacing between said computers and controlling the respective functioning thereof for performing a convolution and back projection based upon non-absorbed radiation detected by said detector means, whereby the reconstruction means converts values of the non-absorbed radiation into values of absorbed radiation at each of an arbitrarily large number of points selected within the object slice. Display means are coupled to the reconstruction means for providing a visual or other display or representation of the quantities of radiation absorbed at the points considered in the object. (Auth.)

On an image reconstruction method for ECT

Science.gov (United States)

Sasamoto, Akira; Suzuki, Takayuki; Nishimura, Yoshihiro

2007-04-01

An image by Eddy Current Testing(ECT) is a blurred image to original flaw shape. In order to reconstruct fine flaw image, a new image reconstruction method has been proposed. This method is based on an assumption that a very simple relationship between measured data and source were described by a convolution of response function and flaw shape. This assumption leads to a simple inverse analysis method with deconvolution.In this method, Point Spread Function (PSF) and Line Spread Function(LSF) play a key role in deconvolution processing. This study proposes a simple data processing to determine PSF and LSF from ECT data of machined hole and line flaw. In order to verify its validity, ECT data for SUS316 plate(200x200x10mm) with artificial machined hole and notch flaw had been acquired by differential coil type sensors(produced by ZETEC Inc). Those data were analyzed by the proposed method. The proposed method restored sharp discrete multiple hole image from interfered data by multiple holes. Also the estimated width of line flaw has been much improved compared with original experimental data. Although proposed inverse analysis strategy is simple and easy to implement, its validity to holes and line flaw have been shown by many results that much finer image than original image have been reconstructed.

A comparison of ancestral state reconstruction methods for quantitative characters.

Science.gov (United States)

Royer-Carenzi, Manuela; Didier, Gilles

2016-09-07

Choosing an ancestral state reconstruction method among the alternatives available for quantitative characters may be puzzling. We present here a comparison of seven of them, namely the maximum likelihood, restricted maximum likelihood, generalized least squares under Brownian, Brownian-with-trend and Ornstein-Uhlenbeck models, phylogenetic independent contrasts and squared parsimony methods. A review of the relations between these methods shows that the maximum likelihood, the restricted maximum likelihood and the generalized least squares under Brownian model infer the same ancestral states and can only be distinguished by the distributions accounting for the reconstruction uncertainty which they provide. The respective accuracy of the methods is assessed over character evolution simulated under a Brownian motion with (and without) directional or stabilizing selection. We give the general form of ancestral state distributions conditioned on leaf states under the simulation models. Ancestral distributions are used first, to give a theoretical lower bound of the expected reconstruction error, and second, to develop an original evaluation scheme which is more efficient than comparing the reconstructed and the simulated states. Our simulations show that: (i) the distributions of the reconstruction uncertainty provided by the methods generally make sense (some more than others); (ii) it is essential to detect the presence of an evolutionary trend and to choose a reconstruction method accordingly; (iii) all the methods show good performances on characters under stabilizing selection; (iv) without trend or stabilizing selection, the maximum likelihood method is generally the most accurate. Copyright © 2016 Elsevier Ltd. All rights reserved.

An alternative method for the measurement of neutron flux

Indian Academy of Sciences (India)

A simple and easy method for measuring the neutron flux is presented. This paper deals with the experimental verification of neutron dose rate–flux relationship for a non-dissipative medium. Though the neutron flux cannot be obtained from the dose rate in a dissipative medium, experimental result shows that for ...

Parallel MR image reconstruction using augmented Lagrangian methods.

Science.gov (United States)

Ramani, Sathish; Fessler, Jeffrey A

2011-03-01

Magnetic resonance image (MRI) reconstruction using SENSitivity Encoding (SENSE) requires regularization to suppress noise and aliasing effects. Edge-preserving and sparsity-based regularization criteria can improve image quality, but they demand computation-intensive nonlinear optimization. In this paper, we present novel methods for regularized MRI reconstruction from undersampled sensitivity encoded data--SENSE-reconstruction--using the augmented Lagrangian (AL) framework for solving large-scale constrained optimization problems. We first formulate regularized SENSE-reconstruction as an unconstrained optimization task and then convert it to a set of (equivalent) constrained problems using variable splitting. We then attack these constrained versions in an AL framework using an alternating minimization method, leading to algorithms that can be implemented easily. The proposed methods are applicable to a general class of regularizers that includes popular edge-preserving (e.g., total-variation) and sparsity-promoting (e.g., l(1)-norm of wavelet coefficients) criteria and combinations thereof. Numerical experiments with synthetic and in vivo human data illustrate that the proposed AL algorithms converge faster than both general-purpose optimization algorithms such as nonlinear conjugate gradient (NCG) and state-of-the-art MFISTA.

Particle fluxes above forests: Observations, methodological considerations and method comparisons

International Nuclear Information System (INIS)

Pryor, S.C.; Larsen, S.E.; Sorensen, L.L.; Barthelmie, R.J.

2008-01-01

This paper reports a study designed to test, evaluate and compare micro-meteorological methods for determining the particle number flux above forest canopies. Half-hour average particle number fluxes above a representative broad-leaved forest in Denmark derived using eddy covariance range from -7 x 10 7 m -2 s -1 (1st percentile) to 5 x 10 7 m -2 s -1 (99th percentile), and have a median value of -1.6 x 10 6 m -2 s -1 . The statistical uncertainties associated with the particle number flux estimates are larger than those for momentum fluxes and imply that in this data set approximately half of the particle number fluxes are not statistically different to zero. Particle number fluxes from relaxed eddy accumulation (REA) and eddy covariance are highly correlated and of almost identical magnitude. Flux estimates from the co-spectral and dissipation methods are also correlated with those from eddy covariance but exhibit higher absolute magnitude of fluxes. - Number fluxes of ultra-fine particles over a forest computed using four micro-meteorological techniques are highly correlated but vary in magnitude

Probability Density Function Method for Observing Reconstructed Attractor Structure

Institute of Scientific and Technical Information of China (English)

陆宏伟; 陈亚珠; 卫青

2004-01-01

Probability density function (PDF) method is proposed for analysing the structure of the reconstructed attractor in computing the correlation dimensions of RR intervals of ten normal old men. PDF contains important information about the spatial distribution of the phase points in the reconstructed attractor. To the best of our knowledge, it is the first time that the PDF method is put forward for the analysis of the reconstructed attractor structure. Numerical simulations demonstrate that the cardiac systems of healthy old men are about 6 - 6.5 dimensional complex dynamical systems. It is found that PDF is not symmetrically distributed when time delay is small, while PDF satisfies Gaussian distribution when time delay is big enough. A cluster effect mechanism is presented to explain this phenomenon. By studying the shape of PDFs, that the roles played by time delay are more important than embedding dimension in the reconstruction is clearly indicated. Results have demonstrated that the PDF method represents a promising numerical approach for the observation of the reconstructed attractor structure and may provide more information and new diagnostic potential of the analyzed cardiac system.

Image reconstruction methods in positron tomography

International Nuclear Information System (INIS)

Townsend, D.W.; Defrise, M.

1993-01-01

In the two decades since the introduction of the X-ray scanner into radiology, medical imaging techniques have become widely established as essential tools in the diagnosis of disease. As a consequence of recent technological and mathematical advances, the non-invasive, three-dimensional imaging of internal organs such as the brain and the heart is now possible, not only for anatomical investigations using X-ray but also for studies which explore the functional status of the body using positron-emitting radioisotopes. This report reviews the historical and physical basis of medical imaging techniques using positron-emitting radioisotopes. Mathematical methods which enable three-dimensional distributions of radioisotopes to be reconstructed from projection data (sinograms) acquired by detectors suitably positioned around the patient are discussed. The extension of conventional two-dimensional tomographic reconstruction algorithms to fully three-dimensional reconstruction is described in detail. (orig.)

Current profile reconstruction using electron temperature imaging diagnostics

International Nuclear Information System (INIS)

Tritz, K.; Stutman, D.; Delgado-Aparicio, L.F.; Finkenthal, M.; Pacella, D.; Kaita, R.; Stratton, B.; Sabbagh, S.

2004-01-01

Flux surface shape information can be used to constrain the current profile for reconstruction of the plasma equilibrium. One method of inferring flux surface shape relies on plasma x-ray emission; however, deviations from the flux surfaces due to impurity and density asymmetries complicate the interpretation. Electron isotherm surfaces should correspond well to the plasma flux surfaces, and equilibrium constraint modeling using this isotherm information constrains the current profile. The KFIT code is used to assess the profile uncertainty and to optimize the number, location and SNR required for the Te detectors. As Te imaging detectors we consider tangentially viewing, vertically spaced, linear gas electron multiplier arrays operated in pulse height analysis (PHA) mode and multifoil soft x-ray arrays. Isoflux coordinate sets provided by T e measurements offer a strong constraint on the equilibrium reconstruction in both a stacked horizontal array configuration and a crossed horizontal and vertical beam system, with q 0 determined to within ±4%. The required SNR can be provided with either PHA or multicolor diagnostic techniques, though the multicolor system requires ∼x4 better statistics for comparable final errors

Evaluation of a 3D point cloud tetrahedral tomographic reconstruction method

Science.gov (United States)

Pereira, N. F.; Sitek, A.

2010-09-01

Tomographic reconstruction on an irregular grid may be superior to reconstruction on a regular grid. This is achieved through an appropriate choice of the image space model, the selection of an optimal set of points and the use of any available prior information during the reconstruction process. Accordingly, a number of reconstruction-related parameters must be optimized for best performance. In this work, a 3D point cloud tetrahedral mesh reconstruction method is evaluated for quantitative tasks. A linear image model is employed to obtain the reconstruction system matrix and five point generation strategies are studied. The evaluation is performed using the recovery coefficient, as well as voxel- and template-based estimates of bias and variance measures, computed over specific regions in the reconstructed image. A similar analysis is performed for regular grid reconstructions that use voxel basis functions. The maximum likelihood expectation maximization reconstruction algorithm is used. For the tetrahedral reconstructions, of the five point generation methods that are evaluated, three use image priors. For evaluation purposes, an object consisting of overlapping spheres with varying activity is simulated. The exact parallel projection data of this object are obtained analytically using a parallel projector, and multiple Poisson noise realizations of these exact data are generated and reconstructed using the different point generation strategies. The unconstrained nature of point placement in some of the irregular mesh-based reconstruction strategies has superior activity recovery for small, low-contrast image regions. The results show that, with an appropriately generated set of mesh points, the irregular grid reconstruction methods can out-perform reconstructions on a regular grid for mathematical phantoms, in terms of the performance measures evaluated.

Evaluation of a 3D point cloud tetrahedral tomographic reconstruction method

International Nuclear Information System (INIS)

Pereira, N F; Sitek, A

2010-01-01

Tomographic reconstruction on an irregular grid may be superior to reconstruction on a regular grid. This is achieved through an appropriate choice of the image space model, the selection of an optimal set of points and the use of any available prior information during the reconstruction process. Accordingly, a number of reconstruction-related parameters must be optimized for best performance. In this work, a 3D point cloud tetrahedral mesh reconstruction method is evaluated for quantitative tasks. A linear image model is employed to obtain the reconstruction system matrix and five point generation strategies are studied. The evaluation is performed using the recovery coefficient, as well as voxel- and template-based estimates of bias and variance measures, computed over specific regions in the reconstructed image. A similar analysis is performed for regular grid reconstructions that use voxel basis functions. The maximum likelihood expectation maximization reconstruction algorithm is used. For the tetrahedral reconstructions, of the five point generation methods that are evaluated, three use image priors. For evaluation purposes, an object consisting of overlapping spheres with varying activity is simulated. The exact parallel projection data of this object are obtained analytically using a parallel projector, and multiple Poisson noise realizations of these exact data are generated and reconstructed using the different point generation strategies. The unconstrained nature of point placement in some of the irregular mesh-based reconstruction strategies has superior activity recovery for small, low-contrast image regions. The results show that, with an appropriately generated set of mesh points, the irregular grid reconstruction methods can out-perform reconstructions on a regular grid for mathematical phantoms, in terms of the performance measures evaluated.

Evaluation of a 3D point cloud tetrahedral tomographic reconstruction method

Energy Technology Data Exchange (ETDEWEB)

Pereira, N F; Sitek, A, E-mail: nfp4@bwh.harvard.ed, E-mail: asitek@bwh.harvard.ed [Department of Radiology, Brigham and Women' s Hospital-Harvard Medical School Boston, MA (United States)

2010-09-21

Tomographic reconstruction on an irregular grid may be superior to reconstruction on a regular grid. This is achieved through an appropriate choice of the image space model, the selection of an optimal set of points and the use of any available prior information during the reconstruction process. Accordingly, a number of reconstruction-related parameters must be optimized for best performance. In this work, a 3D point cloud tetrahedral mesh reconstruction method is evaluated for quantitative tasks. A linear image model is employed to obtain the reconstruction system matrix and five point generation strategies are studied. The evaluation is performed using the recovery coefficient, as well as voxel- and template-based estimates of bias and variance measures, computed over specific regions in the reconstructed image. A similar analysis is performed for regular grid reconstructions that use voxel basis functions. The maximum likelihood expectation maximization reconstruction algorithm is used. For the tetrahedral reconstructions, of the five point generation methods that are evaluated, three use image priors. For evaluation purposes, an object consisting of overlapping spheres with varying activity is simulated. The exact parallel projection data of this object are obtained analytically using a parallel projector, and multiple Poisson noise realizations of these exact data are generated and reconstructed using the different point generation strategies. The unconstrained nature of point placement in some of the irregular mesh-based reconstruction strategies has superior activity recovery for small, low-contrast image regions. The results show that, with an appropriately generated set of mesh points, the irregular grid reconstruction methods can out-perform reconstructions on a regular grid for mathematical phantoms, in terms of the performance measures evaluated.

Alternative method for reconstruction of antihydrogen annihilation vertices

Energy Technology Data Exchange (ETDEWEB)

Amole, C., E-mail: chanpreet.amole@cern.ch [York University, Department of Physics and Astronomy (Canada); Ashkezari, M. D. [Simon Fraser University, Department of Physics (Canada); Andresen, G. B. [Aarhus University, Department of Physics and Astronomy (Denmark); Baquero-Ruiz, M. [University of California, Department of Physics (United States); Bertsche, W. [Swansea University, Department of Physics (United Kingdom); Bowe, P. D. [Aarhus University, Department of Physics and Astronomy (Denmark); Butler, E. [CERN, Physics Department (Switzerland); Cesar, C. L. [Universidade Federal do Rio de Janeiro, Instituto de Fisica (Brazil); Chapman, S. [University of California, Department of Physics (United States); Charlton, M.; Deller, A.; Eriksson, S. [Swansea University, Department of Physics (United Kingdom); Fajans, J. [University of California, Department of Physics (United States); Friesen, T.; Fujiwara, M. C. [University of Calgary, Department of Physics and Astronomy (Canada); Gill, D. R. [TRIUMF (Canada); Gutierrez, A. [University of British Columbia, Department of Physics and Astronomy (Canada); Hangst, J. S. [Aarhus University, Department of Physics and Astronomy (Denmark); Hardy, W. N. [University of British Columbia, Department of Physics and Astronomy (Canada); Hayano, R. S. [University of Tokyo, Department of Physics (Japan); Collaboration: ALPHA Collaboration; and others

2012-12-15

The ALPHA experiment, located at CERN, aims to compare the properties of antihydrogen atoms with those of hydrogen atoms. The neutral antihydrogen atoms are trapped using an octupole magnetic trap. The trap region is surrounded by a three layered silicon detector used to reconstruct the antiproton annihilation vertices. This paper describes a method we have devised that can be used for reconstructing annihilation vertices with a good resolution and is more efficient than the standard method currently used for the same purpose.

Alternative method for reconstruction of antihydrogen annihilation vertices

CERN Document Server

Amole, C; Andresen , G B; Baquero-Ruiz, M; Bertsche, W; Bowe, P D; Butler, E; Cesar, C L; Chapman, S; Charlton, M; Deller, A; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayano, R S; Hayden, M E; Humphries, A J; Hydomako, R; Jonsell, S; Kurchaninov, L; Madsen, N; Menary, S; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Robicheaux, F; Sarid, E; Silveira, D M; So, C; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S; Yamazaki,Y

2012-01-01

The ALPHA experiment, located at CERN, aims to compare the properties of antihydrogen atoms with those of hydrogen atoms. The neutral antihydrogen atoms are trapped using an octupole magnetic trap. The trap region is surrounded by a three layered silicon detector used to reconstruct the antiproton annihilation vertices. This paper describes a method we have devised that can be used for reconstructing annihilation vertices with a good resolution and is more efficient than the standard method currently used for the same purpose.

Dynamic Error Analysis Method for Vibration Shape Reconstruction of Smart FBG Plate Structure

Directory of Open Access Journals (Sweden)

Hesheng Zhang

2016-01-01

Full Text Available Shape reconstruction of aerospace plate structure is an important issue for safe operation of aerospace vehicles. One way to achieve such reconstruction is by constructing smart fiber Bragg grating (FBG plate structure with discrete distributed FBG sensor arrays using reconstruction algorithms in which error analysis of reconstruction algorithm is a key link. Considering that traditional error analysis methods can only deal with static data, a new dynamic data error analysis method are proposed based on LMS algorithm for shape reconstruction of smart FBG plate structure. Firstly, smart FBG structure and orthogonal curved network based reconstruction method is introduced. Then, a dynamic error analysis model is proposed for dynamic reconstruction error analysis. Thirdly, the parameter identification is done for the proposed dynamic error analysis model based on least mean square (LMS algorithm. Finally, an experimental verification platform is constructed and experimental dynamic reconstruction analysis is done. Experimental results show that the dynamic characteristics of the reconstruction performance for plate structure can be obtained accurately based on the proposed dynamic error analysis method. The proposed method can also be used for other data acquisition systems and data processing systems as a general error analysis method.

The gridding method for image reconstruction by Fourier transformation

International Nuclear Information System (INIS)

Schomberg, H.; Timmer, J.

1995-01-01

This paper explores a computational method for reconstructing an n-dimensional signal f from a sampled version of its Fourier transform f. The method involves a window function w and proceeds in three steps. First, the convolution g = w * f is computed numerically on a Cartesian grid, using the available samples of f. Then, g = wf is computed via the inverse discrete Fourier transform, and finally f is obtained as g/w. Due to the smoothing effect of the convolution, evaluating w * f is much less error prone than merely interpolating f. The method was originally devised for image reconstruction in radio astronomy, but is actually applicable to a broad range of reconstructive imaging methods, including magnetic resonance imaging and computed tomography. In particular, it provides a fast and accurate alternative to the filtered backprojection. The basic method has several variants with other applications, such as the equidistant resampling of arbitrarily sampled signals or the fast computation of the Radon (Hough) transform

Reconstruction of CT images by the Bayes- back projection method

CERN Document Server

Haruyama, M; Takase, M; Tobita, H

2002-01-01

In the course of research on quantitative assay of non-destructive measurement of radioactive waste, the have developed a unique program based on the Bayesian theory for reconstruction of transmission computed tomography (TCT) image. The reconstruction of cross-section images in the CT technology usually employs the Filtered Back Projection method. The new imaging reconstruction program reported here is based on the Bayesian Back Projection method, and it has a function of iterative improvement images by every step of measurement. Namely, this method has the capability of prompt display of a cross-section image corresponding to each angled projection data from every measurement. Hence, it is possible to observe an improved cross-section view by reflecting each projection data in almost real time. From the basic theory of Baysian Back Projection method, it can be not only applied to CT types of 1st, 2nd, and 3rd generation. This reported deals with a reconstruction program of cross-section images in the CT of ...

An iterative reconstruction method of complex images using expectation maximization for radial parallel MRI

International Nuclear Information System (INIS)

Choi, Joonsung; Kim, Dongchan; Oh, Changhyun; Han, Yeji; Park, HyunWook

2013-01-01

In MRI (magnetic resonance imaging), signal sampling along a radial k-space trajectory is preferred in certain applications due to its distinct advantages such as robustness to motion, and the radial sampling can be beneficial for reconstruction algorithms such as parallel MRI (pMRI) due to the incoherency. For radial MRI, the image is usually reconstructed from projection data using analytic methods such as filtered back-projection or Fourier reconstruction after gridding. However, the quality of the reconstructed image from these analytic methods can be degraded when the number of acquired projection views is insufficient. In this paper, we propose a novel reconstruction method based on the expectation maximization (EM) method, where the EM algorithm is remodeled for MRI so that complex images can be reconstructed. Then, to optimize the proposed method for radial pMRI, a reconstruction method that uses coil sensitivity information of multichannel RF coils is formulated. Experiment results from synthetic and in vivo data show that the proposed method introduces better reconstructed images than the analytic methods, even from highly subsampled data, and provides monotonic convergence properties compared to the conjugate gradient based reconstruction method. (paper)

MicrobesFlux: a web platform for drafting metabolic models from the KEGG database

Directory of Open Access Journals (Sweden)

Feng Xueyang

2012-08-01

Full Text Available Abstract Background Concurrent with the efforts currently underway in mapping microbial genomes using high-throughput sequencing methods, systems biologists are building metabolic models to characterize and predict cell metabolisms. One of the key steps in building a metabolic model is using multiple databases to collect and assemble essential information about genome-annotations and the architecture of the metabolic network for a specific organism. To speed up metabolic model development for a large number of microorganisms, we need a user-friendly platform to construct metabolic networks and to perform constraint-based flux balance analysis based on genome databases and experimental results. Results We have developed a semi-automatic, web-based platform (MicrobesFlux for generating and reconstructing metabolic models for annotated microorganisms. MicrobesFlux is able to automatically download the metabolic network (including enzymatic reactions and metabolites of ~1,200 species from the KEGG database (Kyoto Encyclopedia of Genes and Genomes and then convert it to a metabolic model draft. The platform also provides diverse customized tools, such as gene knockouts and the introduction of heterologous pathways, for users to reconstruct the model network. The reconstructed metabolic network can be formulated to a constraint-based flux model to predict and analyze the carbon fluxes in microbial metabolisms. The simulation results can be exported in the SBML format (The Systems Biology Markup Language. Furthermore, we also demonstrated the platform functionalities by developing an FBA model (including 229 reactions for a recent annotated bioethanol producer, Thermoanaerobacter sp. strain X514, to predict its biomass growth and ethanol production. Conclusion MicrobesFlux is an installation-free and open-source platform that enables biologists without prior programming knowledge to develop metabolic models for annotated microorganisms in the KEGG

Porous media microstructure reconstruction using pixel-based and object-based simulated annealing: comparison with other reconstruction methods

Energy Technology Data Exchange (ETDEWEB)

Diogenes, Alysson N.; Santos, Luis O.E. dos; Fernandes, Celso P. [Universidade Federal de Santa Catarina (UFSC), Florianopolis, SC (Brazil); Appoloni, Carlos R. [Universidade Estadual de Londrina (UEL), PR (Brazil)

2008-07-01

The reservoir rocks physical properties are usually obtained in laboratory, through standard experiments. These experiments are often very expensive and time-consuming. Hence, the digital image analysis techniques are a very fast and low cost methodology for physical properties prediction, knowing only geometrical parameters measured from the rock microstructure thin sections. This research analyzes two methods for porous media reconstruction using the relaxation method simulated annealing. Using geometrical parameters measured from rock thin sections, it is possible to construct a three-dimensional (3D) model of the microstructure. We assume statistical homogeneity and isotropy and the 3D model maintains porosity spatial correlation, chord size distribution and d 3-4 distance transform distribution for a pixel-based reconstruction and spatial correlation for an object-based reconstruction. The 2D and 3D preliminary results are compared with microstructures reconstructed by truncated Gaussian methods. As this research is in its beginning, only the 2D results will be presented. (author)

Two-Dimensional Impact Reconstruction Method for Rail Defect Inspection

Directory of Open Access Journals (Sweden)

Jie Zhao

2014-01-01

Full Text Available The safety of train operating is seriously menaced by the rail defects, so it is of great significance to inspect rail defects dynamically while the train is operating. This paper presents a two-dimensional impact reconstruction method to realize the on-line inspection of rail defects. The proposed method utilizes preprocessing technology to convert time domain vertical vibration signals acquired by wireless sensor network to space signals. The modern time-frequency analysis method is improved to reconstruct the obtained multisensor information. Then, the image fusion processing technology based on spectrum threshold processing and node color labeling is proposed to reduce the noise, and blank the periodic impact signal caused by rail joints and locomotive running gear. This method can convert the aperiodic impact signals caused by rail defects to partial periodic impact signals, and locate the rail defects. An application indicates that the two-dimensional impact reconstruction method could display the impact caused by rail defects obviously, and is an effective on-line rail defects inspection method.

Mixed analytical-stochastic simulation method for the recovery of a Brownian gradient source from probability fluxes to small windows.

Science.gov (United States)

Dobramysl, U; Holcman, D

2018-02-15

Is it possible to recover the position of a source from the steady-state fluxes of Brownian particles to small absorbing windows located on the boundary of a domain? To address this question, we develop a numerical procedure to avoid tracking Brownian trajectories in the entire infinite space. Instead, we generate particles near the absorbing windows, computed from the analytical expression of the exit probability. When the Brownian particles are generated by a steady-state gradient at a single point, we compute asymptotically the fluxes to small absorbing holes distributed on the boundary of half-space and on a disk in two dimensions, which agree with stochastic simulations. We also derive an expression for the splitting probability between small windows using the matched asymptotic method. Finally, when there are more than two small absorbing windows, we show how to reconstruct the position of the source from the diffusion fluxes. The present approach provides a computational first principle for the mechanism of sensing a gradient of diffusing particles, a ubiquitous problem in cell biology.

A multiscale mortar multipoint flux mixed finite element method

KAUST Repository

Wheeler, Mary Fanett

2012-02-03

In this paper, we develop a multiscale mortar multipoint flux mixed finite element method for second order elliptic problems. The equations in the coarse elements (or subdomains) are discretized on a fine grid scale by a multipoint flux mixed finite element method that reduces to cell-centered finite differences on irregular grids. The subdomain grids do not have to match across the interfaces. Continuity of flux between coarse elements is imposed via a mortar finite element space on a coarse grid scale. With an appropriate choice of polynomial degree of the mortar space, we derive optimal order convergence on the fine scale for both the multiscale pressure and velocity, as well as the coarse scale mortar pressure. Some superconvergence results are also derived. The algebraic system is reduced via a non-overlapping domain decomposition to a coarse scale mortar interface problem that is solved using a multiscale flux basis. Numerical experiments are presented to confirm the theory and illustrate the efficiency and flexibility of the method. © EDP Sciences, SMAI, 2012.

A multiscale mortar multipoint flux mixed finite element method

KAUST Repository

Wheeler, Mary Fanett; Xue, Guangri; Yotov, Ivan

2012-01-01

In this paper, we develop a multiscale mortar multipoint flux mixed finite element method for second order elliptic problems. The equations in the coarse elements (or subdomains) are discretized on a fine grid scale by a multipoint flux mixed finite

COMPARISON OF HOLOGRAPHIC AND ITERATIVE METHODS FOR AMPLITUDE OBJECT RECONSTRUCTION

Directory of Open Access Journals (Sweden)

I. A. Shevkunov

2015-01-01

Full Text Available Experimental comparison of four methods for the wavefront reconstruction is presented. We considered two iterative and two holographic methods with different mathematical models and algorithms for recovery. The first two of these methods do not use a reference wave recording scheme that reduces requirements for stability of the installation. A major role in phase information reconstruction by such methods is played by a set of spatial intensity distributions, which are recorded as the recording matrix is being moved along the optical axis. The obtained data are used consistently for wavefront reconstruction using an iterative procedure. In the course of this procedure numerical distribution of the wavefront between the planes is performed. Thus, phase information of the wavefront is stored in every plane and calculated amplitude distributions are replaced for the measured ones in these planes. In the first of the compared methods, a two-dimensional Fresnel transform and iterative calculation in the object plane are used as a mathematical model. In the second approach, an angular spectrum method is used for numerical wavefront propagation, and the iterative calculation is carried out only between closely located planes of data registration. Two digital holography methods, based on the usage of the reference wave in the recording scheme and differing from each other by numerical reconstruction algorithm of digital holograms, are compared with the first two methods. The comparison proved that the iterative method based on 2D Fresnel transform gives results comparable with the result of common holographic method with the Fourier-filtering. It is shown that holographic method for reconstructing of the object complex amplitude in the process of the object amplitude reduction is the best among considered ones.

Anatomical image-guided fluorescence molecular tomography reconstruction using kernel method

Science.gov (United States)

Baikejiang, Reheman; Zhao, Yue; Fite, Brett Z.; Ferrara, Katherine W.; Li, Changqing

2017-01-01

Abstract. Fluorescence molecular tomography (FMT) is an important in vivo imaging modality to visualize physiological and pathological processes in small animals. However, FMT reconstruction is ill-posed and ill-conditioned due to strong optical scattering in deep tissues, which results in poor spatial resolution. It is well known that FMT image quality can be improved substantially by applying the structural guidance in the FMT reconstruction. An approach to introducing anatomical information into the FMT reconstruction is presented using the kernel method. In contrast to conventional methods that incorporate anatomical information with a Laplacian-type regularization matrix, the proposed method introduces the anatomical guidance into the projection model of FMT. The primary advantage of the proposed method is that it does not require segmentation of targets in the anatomical images. Numerical simulations and phantom experiments have been performed to demonstrate the proposed approach’s feasibility. Numerical simulation results indicate that the proposed kernel method can separate two FMT targets with an edge-to-edge distance of 1 mm and is robust to false-positive guidance and inhomogeneity in the anatomical image. For the phantom experiments with two FMT targets, the kernel method has reconstructed both targets successfully, which further validates the proposed kernel method. PMID:28464120

Magnetic flux concentration methods for magnetic energy harvesting module

Directory of Open Access Journals (Sweden)

Wakiwaka Hiroyuki

2013-01-01

Full Text Available This paper presents magnetic flux concentration methods for magnetic energy harvesting module. The purpose of this study is to harvest 1 mW energy with a Brooks coil 2 cm in diameter from environmental magnetic field at 60 Hz. Because the harvesting power is proportional to the square of the magnetic flux density, we consider the use of a magnetic flux concentration coil and a magnetic core. The magnetic flux concentration coil consists of an air­core Brooks coil and a resonant capacitor. When a uniform magnetic field crossed the coil, the magnetic flux distribution around the coil was changed. It is found that the magnetic field in an area is concentrated larger than 20 times compared with the uniform magnetic field. Compared with the air­core coil, our designed magnetic core makes the harvested energy ten­fold. According to ICNIRP2010 guideline, the acceptable level of magnetic field is 0.2 mT in the frequency range between 25 Hz and 400 Hz. Without the two magnetic flux concentration methods, the corresponding energy is limited to 1 µW. In contrast, our experimental results successfully demonstrate energy harvesting of 1 mW from a magnetic field of 0.03 mT at 60 Hz.

A shape-based quality evaluation and reconstruction method for electrical impedance tomography.

Science.gov (United States)

Antink, Christoph Hoog; Pikkemaat, Robert; Malmivuo, Jaakko; Leonhardt, Steffen

2015-06-01

Linear methods of reconstruction play an important role in medical electrical impedance tomography (EIT) and there is a wide variety of algorithms based on several assumptions. With the Graz consensus reconstruction algorithm for EIT (GREIT), a novel linear reconstruction algorithm as well as a standardized framework for evaluating and comparing methods of reconstruction were introduced that found widespread acceptance in the community. In this paper, we propose a two-sided extension of this concept by first introducing a novel method of evaluation. Instead of being based on point-shaped resistivity distributions, we use 2759 pairs of real lung shapes for evaluation that were automatically segmented from human CT data. Necessarily, the figures of merit defined in GREIT were adjusted. Second, a linear method of reconstruction that uses orthonormal eigenimages as training data and a tunable desired point spread function are proposed. Using our novel method of evaluation, this approach is compared to the classical point-shaped approach. Results show that most figures of merit improve with the use of eigenimages as training data. Moreover, the possibility of tuning the reconstruction by modifying the desired point spread function is shown. Finally, the reconstruction of real EIT data shows that higher contrasts and fewer artifacts can be achieved in ventilation- and perfusion-related images.

A shape-based quality evaluation and reconstruction method for electrical impedance tomography

International Nuclear Information System (INIS)

Antink, Christoph Hoog; Pikkemaat, Robert; Leonhardt, Steffen; Malmivuo, Jaakko

2015-01-01

Linear methods of reconstruction play an important role in medical electrical impedance tomography (EIT) and there is a wide variety of algorithms based on several assumptions. With the Graz consensus reconstruction algorithm for EIT (GREIT), a novel linear reconstruction algorithm as well as a standardized framework for evaluating and comparing methods of reconstruction were introduced that found widespread acceptance in the community.In this paper, we propose a two-sided extension of this concept by first introducing a novel method of evaluation. Instead of being based on point-shaped resistivity distributions, we use 2759 pairs of real lung shapes for evaluation that were automatically segmented from human CT data. Necessarily, the figures of merit defined in GREIT were adjusted. Second, a linear method of reconstruction that uses orthonormal eigenimages as training data and a tunable desired point spread function are proposed.Using our novel method of evaluation, this approach is compared to the classical point-shaped approach. Results show that most figures of merit improve with the use of eigenimages as training data. Moreover, the possibility of tuning the reconstruction by modifying the desired point spread function is shown. Finally, the reconstruction of real EIT data shows that higher contrasts and fewer artifacts can be achieved in ventilation- and perfusion-related images. (paper)

Dynamic PET Image reconstruction for parametric imaging using the HYPR kernel method

Science.gov (United States)

Spencer, Benjamin; Qi, Jinyi; Badawi, Ramsey D.; Wang, Guobao

2017-03-01

Dynamic PET image reconstruction is a challenging problem because of the ill-conditioned nature of PET and the lowcounting statistics resulted from short time-frames in dynamic imaging. The kernel method for image reconstruction has been developed to improve image reconstruction of low-count PET data by incorporating prior information derived from high-count composite data. In contrast to most of the existing regularization-based methods, the kernel method embeds image prior information in the forward projection model and does not require an explicit regularization term in the reconstruction formula. Inspired by the existing highly constrained back-projection (HYPR) algorithm for dynamic PET image denoising, we propose in this work a new type of kernel that is simpler to implement and further improves the kernel-based dynamic PET image reconstruction. Our evaluation study using a physical phantom scan with synthetic FDG tracer kinetics has demonstrated that the new HYPR kernel-based reconstruction can achieve a better region-of-interest (ROI) bias versus standard deviation trade-off for dynamic PET parametric imaging than the post-reconstruction HYPR denoising method and the previously used nonlocal-means kernel.

Comparison between Evapotranspiration Fluxes Assessment Methods

Science.gov (United States)

Casola, A.; Longobardi, A.; Villani, P.

2009-11-01

Knowledge of hydrological processes acting in the water balance is determinant for a rational water resources management plan. Among these, the water losses as vapour, in the form of evapotranspiration, play an important role in the water balance and the heat transfers between the land surface and the atmosphere. Mass and energy interactions between soil, atmosphere and vegetation, in fact, influence all hydrological processes modificating rainfall interception, infiltration, evapotraspiration, surface runoff and groundwater recharge.A numbers of methods have been developed in scientific literature for modelling evapotranspiration. They can be divided in three main groups: i) traditional meteorological models, ii) energy fluxes balance models, considering interaction between vegetation and the atmosphere, and iii) remote sensing based models. The present analysis preliminary performs a study of fluxes directions and an evaluation of energy balance closure in a typical Mediterranean short vegetation area, using data series recorded from an eddy covariance station, located in the Campania region, Southern Italy. The analysis was performed on different seasons of the year with the aim to assess climatic forcing features impact on fluxes balance, to evaluate the smaller imbalance and to highlight influencing factors and sampling errors on balance closure. The present study also concerns evapotranspiration fluxes assessment at the point scale. Evapotranspiration is evaluated both from empirical relationships (Penmann-Montheit, Penmann F AO, Prestley&Taylor) calibrated with measured energy fluxes at mentioned experimental site, and from measured latent heat data scaled by the latent heat of vaporization. These results are compared with traditional and reliable well known models at the plot scale (Coutagne, Turc, Thorthwaite).

Maximum entropy method in momentum density reconstruction

International Nuclear Information System (INIS)

Dobrzynski, L.; Holas, A.

1997-01-01

The Maximum Entropy Method (MEM) is applied to the reconstruction of the 3-dimensional electron momentum density distributions observed through the set of Compton profiles measured along various crystallographic directions. It is shown that the reconstruction of electron momentum density may be reliably carried out with the aid of simple iterative algorithm suggested originally by Collins. A number of distributions has been simulated in order to check the performance of MEM. It is shown that MEM can be recommended as a model-free approach. (author). 13 refs, 1 fig

A modified sparse reconstruction method for three-dimensional synthetic aperture radar image

Science.gov (United States)

Zhang, Ziqiang; Ji, Kefeng; Song, Haibo; Zou, Huanxin

2018-03-01

There is an increasing interest in three-dimensional Synthetic Aperture Radar (3-D SAR) imaging from observed sparse scattering data. However, the existing 3-D sparse imaging method requires large computing times and storage capacity. In this paper, we propose a modified method for the sparse 3-D SAR imaging. The method processes the collection of noisy SAR measurements, usually collected over nonlinear flight paths, and outputs 3-D SAR imagery. Firstly, the 3-D sparse reconstruction problem is transformed into a series of 2-D slices reconstruction problem by range compression. Then the slices are reconstructed by the modified SL0 (smoothed l0 norm) reconstruction algorithm. The improved algorithm uses hyperbolic tangent function instead of the Gaussian function to approximate the l0 norm and uses the Newton direction instead of the steepest descent direction, which can speed up the convergence rate of the SL0 algorithm. Finally, numerical simulation results are given to demonstrate the effectiveness of the proposed algorithm. It is shown that our method, compared with existing 3-D sparse imaging method, performs better in reconstruction quality and the reconstruction time.

Accelerated gradient methods for total-variation-based CT image reconstruction

DEFF Research Database (Denmark)

Jørgensen, Jakob Heide; Jensen, Tobias Lindstrøm; Hansen, Per Christian

2011-01-01

incorporates several heuristics from the optimization literature such as Barzilai-Borwein (BB) step size selection and nonmonotone line search. The latter uses a cleverly chosen sequence of auxiliary points to achieve a better convergence rate. The methods are memory efficient and equipped with a stopping...... reconstruction can in principle be found by any optimization method, but in practice the large scale of the systems arising in CT image reconstruction preclude the use of memory-demanding methods such as Newton’s method. The simple gradient method has much lower memory requirements, but exhibits slow convergence...

A Total Variation-Based Reconstruction Method for Dynamic MRI

Directory of Open Access Journals (Sweden)

Germana Landi

2008-01-01

Full Text Available In recent years, total variation (TV regularization has become a popular and powerful tool for image restoration and enhancement. In this work, we apply TV minimization to improve the quality of dynamic magnetic resonance images. Dynamic magnetic resonance imaging is an increasingly popular clinical technique used to monitor spatio-temporal changes in tissue structure. Fast data acquisition is necessary in order to capture the dynamic process. Most commonly, the requirement of high temporal resolution is fulfilled by sacrificing spatial resolution. Therefore, the numerical methods have to address the issue of images reconstruction from limited Fourier data. One of the most successful techniques for dynamic imaging applications is the reduced-encoded imaging by generalized-series reconstruction method of Liang and Lauterbur. However, even if this method utilizes a priori data for optimal image reconstruction, the produced dynamic images are degraded by truncation artifacts, most notably Gibbs ringing, due to the spatial low resolution of the data. We use a TV regularization strategy in order to reduce these truncation artifacts in the dynamic images. The resulting TV minimization problem is solved by the fixed point iteration method of Vogel and Oman. The results of test problems with simulated and real data are presented to illustrate the effectiveness of the proposed approach in reducing the truncation artifacts of the reconstructed images.

On-line reconstruction of in-core power distribution by harmonics expansion method

International Nuclear Information System (INIS)

Wang Changhui; Wu Hongchun; Cao Liangzhi; Yang Ping

2011-01-01

Highlights: → A harmonics expansion method for the on-line in-core power reconstruction is proposed. → A harmonics data library is pre-generated off-line and a code named COMS is developed. → Numerical results show that the maximum relative error of the reconstruction is less than 5.5%. → This method has a high computational speed compared to traditional methods. - Abstract: Fixed in-core detectors are most suitable in real-time response to in-core power distributions in pressurized water reactors (PWRs). In this paper, a harmonics expansion method is used to reconstruct the in-core power distribution of a PWR on-line. In this method, the in-core power distribution is expanded by the harmonics of one reference case. The expansion coefficients are calculated using signals provided by fixed in-core detectors. To conserve computing time and improve reconstruction precision, a harmonics data library containing the harmonics of different reference cases is constructed. Upon reconstruction of the in-core power distribution on-line, the two closest reference cases are searched from the harmonics data library to produce expanded harmonics by interpolation. The Unit 1 reactor of DayaBay Nuclear Power Plant (DayaBay NPP) in China is considered for verification. The maximum relative error between the measurement and reconstruction results is less than 5.5%, and the computing time is about 0.53 s for a single reconstruction, indicating that this method is suitable for the on-line monitoring of PWRs.

Reconstruction of on-axis lensless Fourier transform digital hologram with the screen division method

Science.gov (United States)

Jiang, Hongzhen; Liu, Xu; Liu, Yong; Li, Dong; Chen, Zhu; Zheng, Fanglan; Yu, Deqiang

2017-10-01

An effective approach for reconstructing on-axis lensless Fourier Transform digital hologram by using the screen division method is proposed. Firstly, the on-axis Fourier Transform digital hologram is divided into sub-holograms. Then the reconstruction result of every sub-hologram is obtained according to the position of corresponding sub-hologram in the hologram reconstruction plane with Fourier transform operation. Finally, the reconstruction image of on-axis Fourier Transform digital hologram can be acquired by the superposition of the reconstruction result of sub-holograms. Compared with the traditional reconstruction method with the phase shifting technology, in which multiple digital holograms are required to record for obtaining the reconstruction image, this method can obtain the reconstruction image with only one digital hologram and therefore greatly simplify the recording and reconstruction process of on-axis lensless Fourier Transform digital holography. The effectiveness of the proposed method is well proved with the experimental results and it will have potential application foreground in the holographic measurement and display field.

One step linear reconstruction method for continuous wave diffuse optical tomography

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Ukhrowiyah, N.; Yasin, M.

2017-09-01

The method one step linear reconstruction method for continuous wave diffuse optical tomography is proposed and demonstrated for polyvinyl chloride based material and breast phantom. Approximation which used in this method is selecting regulation coefficient and evaluating the difference between two states that corresponding to the data acquired without and with a change in optical properties. This method is used to recovery of optical parameters from measured boundary data of light propagation in the object. The research is demonstrated by simulation and experimental data. Numerical object is used to produce simulation data. Chloride based material and breast phantom sample is used to produce experimental data. Comparisons of results between experiment and simulation data are conducted to validate the proposed method. The results of the reconstruction image which is produced by the one step linear reconstruction method show that the image reconstruction almost same as the original object. This approach provides a means of imaging that is sensitive to changes in optical properties, which may be particularly useful for functional imaging used continuous wave diffuse optical tomography of early diagnosis of breast cancer.

The e/h method of energy reconstruction for combined calorimeter

International Nuclear Information System (INIS)

Kul'chitskij, Yu.A.; Kuz'min, M.V.; Vinogradov, V.B.

1999-01-01

The new simple method of the energy reconstruction for a combined calorimeter, which we called the e/h method, is suggested. It uses only the known e/h ratios and the electron calibration constants and does not require the determination of any parameters by a minimization technique. The method has been tested on the basis of the 1996 test beam data of the ATLAS barrel combined calorimeter and demonstrated the correctness of the reconstruction of the mean values of energies. The obtained fractional energy resolution is [(58 ± 3)%/√E + (2.5 ± 0.3)%] O+ (1.7 ± 0.2) GeV/E. This algorithm can be used for the fast energy reconstruction in the first level trigger

Effect of flux discontinuity on spatial approximations for discrete ordinates methods

International Nuclear Information System (INIS)

Duo, J.I.; Azmy, Y.Y.

2005-01-01

This work presents advances on error analysis of the spatial approximation of the discrete ordinates method for solving the neutron transport equation. Error norms for different non-collided flux problems over a two dimensional pure absorber medium are evaluated using three numerical methods. The problems are characterized by the incoming flux boundary conditions to obtain solutions with different level of differentiability. The three methods considered are the Diamond Difference (DD) method, the Arbitrarily High Order Transport method of the Nodal type (AHOT-N), and of the Characteristic type (AHOT-C). The last two methods are employed in constant, linear and quadratic orders of spatial approximation. The cell-wise error is computed as the difference between the cell-averaged flux computed by each method and the exact value, then the L 1 , L 2 , and L ∞ error norms are calculated. The results of this study demonstrate that the level of differentiability of the exact solution profoundly affects the rate of convergence of the numerical methods' solutions. Furthermore, in the case of discontinuous exact flux the methods fail to converge in the maximum error norm, or in the pointwise sense, in accordance with previous local error analysis. (authors)

Comparison between different methods of measurement of momentum and sensible heat fluxes over canopies

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Marc Aubinet

1997-01-01

Full Text Available Différent methods of measurement of momentum and sensible heat flux densifies are presented and compared above a gras covered fallow. The aerodynamic (AD and eddy covariance (EC methods are presented and compared for both momentum and sensible heat measurements. In addition, the temperature fluctuation (TF method is compared to the HEC method for the sensible heat flux measurement. The AD and EC methods are in good agreement for the momentum flux measurements. For the sensible heat flux, the AD method is very sensible to temperature errors. So it is unusable during night and gives biased estimations during the day. The TF method gives only estimations of the sensible heat flux. It is in good agreement with the EC method during the day but diverges completely during night, being unable to disceming positive from négative fluxes. From the three methods, the EC method is the sole that allows to measure continuously both momentum and sensible heat flux but it requires a loud data treatment. We présent in this paper the algorithm used for this treatment.

Image reconstruction in computerized tomography using the convolution method

International Nuclear Information System (INIS)

Oliveira Rebelo, A.M. de.

1984-03-01

In the present work an algoritin was derived, using the analytical convolution method (filtered back-projection) for two-dimensional or three-dimensional image reconstruction in computerized tomography applied to non-destructive testing and to the medical use. This mathematical model is based on the analytical Fourier transform method for image reconstruction. This model consists of a discontinuous system formed by an NxN array of cells (pixels). The attenuation in the object under study of a colimated gamma ray beam has been determined for various positions and incidence angles (projections) in terms of the interaction of the beam with the intercepted pixels. The contribution of each pixel to beam attenuation was determined using the weight function W ij which was used for simulated tests. Simulated tests using standard objects with attenuation coefficients in the range of 0,2 to 0,7 cm -1 were carried out using cell arrays of up to 25x25. One application was carried out in the medical area simulating image reconstruction of an arm phantom with attenuation coefficients in the range of 0,2 to 0,5 cm -1 using cell arrays of 41x41. The simulated results show that, in objects with a great number of interfaces and great variations of attenuation coefficients at these interfaces, a good reconstruction is obtained with the number of projections equal to the reconstruction matrix dimension. A good reconstruction is otherwise obtained with fewer projections. (author) [pt

Real time equilibrium reconstruction for tokamak discharge control

International Nuclear Information System (INIS)

Ferron, J.R.; Walker, M.L.; Lao, L.L.; St John, H.E.; Humphreys, D.A.; Leuer, J.A.

1998-01-01

A practical method for performing a tokamak equilibrium reconstruction in real time for arbitrary time varying discharge shapes and current profiles is described. An approximate solution to the Grad-Shafranov equilibrium relation is found which best fits the diagnostic measurements. Thus, a solution for the spatial distribution of poloidal flux and toroidal current density is available in real time that is consistent with plasma force balance, allowing accurate evaluation of parameters such as discharge shape and safety factor profile. The equilibrium solutions are produced at a rate sufficient for discharge control. This equilibrium reconstruction algorithm has been implemented on the digital plasma control system for the DIII-D tokamak. The first application of real time equilibrium reconstruction to discharge shape control is described. (author)

Comparing and improving reconstruction methods for proxies based on compositional data

Science.gov (United States)

Nolan, C.; Tipton, J.; Booth, R.; Jackson, S. T.; Hooten, M.

2017-12-01

Many types of studies in paleoclimatology and paleoecology involve compositional data. Often, these studies aim to use compositional data to reconstruct an environmental variable of interest; the reconstruction is usually done via the development of a transfer function. Transfer functions have been developed using many different methods. Existing methods tend to relate the compositional data and the reconstruction target in very simple ways. Additionally, the results from different methods are rarely compared. Here we seek to address these two issues. First, we introduce a new hierarchical Bayesian multivariate gaussian process model; this model allows for the relationship between each species in the compositional dataset and the environmental variable to be modeled in a way that captures the underlying complexities. Then, we compare this new method to machine learning techniques and commonly used existing methods. The comparisons are based on reconstructing the water table depth history of Caribou Bog (an ombrotrophic Sphagnum peat bog in Old Town, Maine, USA) from a new 7500 year long record of testate amoebae assemblages. The resulting reconstructions from different methods diverge in both their resulting means and uncertainties. In particular, uncertainty tends to be drastically underestimated by some common methods. These results will help to improve inference of water table depth from testate amoebae. Furthermore, this approach can be applied to test and improve inferences of past environmental conditions from a broad array of paleo-proxies based on compositional data

Radiation source reconstruction with known geometry and materials using the adjoint

International Nuclear Information System (INIS)

Hykes, Joshua M.; Azmy, Yousry Y.

2011-01-01

We present a method to estimate an unknown isotropic source distribution, in space and energy, using detector measurements when the geometry and material composition are known. The estimated source distribution minimizes the difference between the measured and computed responses of detectors located at a selected number of points within the domain. In typical methods, a forward flux calculation is performed for each source guess in an iterative process. In contrast, we use the adjoint flux to compute the responses. Potential applications of the proposed method include determining the distribution of radio-contaminants following a nuclear event, monitoring the flow of radioactive fluids in pipes to determine hold-up locations, and retroactive reconstruction of radiation fields using workers' detectors' readings. After presenting the method, we describe a numerical test problem to demonstrate the preliminary viability of the method. As expected, using the adjoint flux reduces the number of transport solves to be proportional to the number of detector measurements, in contrast to methods using the forward flux that require a typically larger number proportional to the number of spatial mesh cells. (author)

A Multifactorial Analysis of Reconstruction Methods Applied After Total Gastrectomy

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Oktay Büyükaşık

2010-12-01

Full Text Available Aim: The aim of this study was to evaluate the reconstruction methods applied after total gastrectomy in terms of postoperative symptomology and nutrition. Methods: This retrospective study was conducted on 31 patients who underwent total gastrectomy due to gastric cancer in 2. Clinic of General Surgery, SSK Ankara Training Hospital. 6 different reconstruction methods were used and analyzed in terms of age, sex and postoperative complications. One from esophagus and two biopsy specimens from jejunum were taken through upper gastrointestinal endoscopy from all cases, and late period morphological and microbiological changes were examined. Postoperative weight change, dumping symptoms, reflux esophagitis, solid/liquid dysphagia, early satiety, postprandial pain, diarrhea and anorexia were assessed. Results: Of 31 patients,18 were males and 13 females; the youngest one was 33 years old, while the oldest- 69 years old. It was found that reconstruction without pouch was performed in 22 cases and with pouch in 9 cases. Early satiety, postprandial pain, dumping symptoms, diarrhea and anemia were found most commonly in cases with reconstruction without pouch. The rate of bacterial colonization of the jejunal mucosa was identical in both groups. Reflux esophagitis was most commonly seen in omega esophagojejunostomy (EJ, while the least-in Roux-en-Y, Tooley and Tanner 19 EJ. Conclusion: Reconstruction with pouch performed after total gastrectomy is still a preferable method. (The Medical Bulletin of Haseki 2010; 48:126-31

Quantitative comparison of in situ soil CO2 flux measurement methods

Science.gov (United States)

Jennifer D. Knoepp; James M. Vose

2002-01-01

Development of reliable regional or global carbon budgets requires accurate measurement of soil CO2 flux. We conducted laboratory and field studies to determine the accuracy and comparability of methods commonly used to measure in situ soil CO2 fluxes. Methods compared included CO2...

Fast multiview three-dimensional reconstruction method using cost volume filtering

Science.gov (United States)

Lee, Seung Joo; Park, Min Ki; Jang, In Yeop; Lee, Kwan H.

2014-03-01

As the number of customers who want to record three-dimensional (3-D) information using a mobile electronic device increases, it becomes more and more important to develop a method which quickly reconstructs a 3-D model from multiview images. A fast multiview-based 3-D reconstruction method is presented, which is suitable for the mobile environment by constructing a cost volume of the 3-D height field. This method consists of two steps: the construction of a reliable base surface and the recovery of shape details. In each step, the cost volume is constructed using photoconsistency and then it is filtered according to the multiscale. The multiscale-based cost volume filtering allows the 3-D reconstruction to maintain the overall shape and to preserve the shape details. We demonstrate the strength of the proposed method in terms of computation time, accuracy, and unconstrained acquisition environment.

Direct fourier methods in 3D-reconstruction from cone-beam data

International Nuclear Information System (INIS)

Axelsson, C.

1994-01-01

The problem of 3D-reconstruction is encountered in both medical and industrial applications of X-ray tomography. A method able to utilize a complete set of projections complying with Tuys condition was proposed by Grangeat. His method is mathematically exact and consists of two distinct phases. In phase 1 cone-beam projection data are used to produce the derivative of the radon transform. In phase 2, after interpolation, the radon transform data are used to reconstruct the three-dimensional object function. To a large extent our method is an extension of the Grangeat method. Our aim is to reduce the computational complexity, i.e. to produce a faster method. The most taxing procedure during phase 1 is computation of line-integrals in the detector plane. By applying the direct Fourier method in reverse for this computation, we reduce the complexity of phase 1 from O(N 4 ) to O(N 3 logN). Phase 2 can be performed either as a straight 3D-reconstruction or as a sequence of two 2D-reconstructions in vertical and horizontal planes, respectively. Direct Fourier methods can be applied for the 2D- and for the 3D-reconstruction, which reduces the complexity of phase 2 from O(N 4 ) to O(N 3 logN) as well. In both cases, linogram techniques are applied. For 3D-reconstruction the inversion formula contains the second derivative filter instead of the well-known ramp-filter employed in the 2D-case. The derivative filter is more well-behaved than the 2D ramp-filter. This implies that less zeropadding is necessary which brings about a further reduction of the computational efforts. The method has been verified by experiments on simulated data. The image quality is satisfactory and independent of cone-beam angles. For a 512 3 volume we estimate that our method is ten times faster than Grangeats method

The higher order flux mapping method in large size PHWRs

International Nuclear Information System (INIS)

Kulkarni, A.K.; Balaraman, V.; Purandare, H.D.

1997-01-01

A new higher order method is proposed for obtaining flux map using single set of expansion mode. In this procedure, one can make use of the difference between predicted value of detector reading and their actual values for determining the strength of local fluxes around detector site. The local fluxes are arising due to constant perturbation changes (both extrinsic and intrinsic) taking place in the reactor. (author)

Evaluation of analytical reconstruction with a new gap-filling method in comparison to iterative reconstruction in [11C]-raclopride PET studies

International Nuclear Information System (INIS)

Tuna, U.; Johansson, J.; Ruotsalainen, U.

2014-01-01

The aim of the study was (1) to evaluate the reconstruction strategies with dynamic [ 11 C]-raclopride human positron emission tomography (PET) studies acquired from ECAT high-resolution research tomograph (HRRT) scanner and (2) to justify for the selected gap-filling method for analytical reconstruction with simulated phantom data. A new transradial bicubic interpolation method has been implemented to enable faster analytical 3D-reprojection (3DRP) reconstructions for the ECAT HRRT PET scanner data. The transradial bicubic interpolation method was compared to the other gap-filling methods visually and quantitatively using the numerical Shepp-Logan phantom. The performance of the analytical 3DRP reconstruction method with this new gap-filling method was evaluated in comparison with the iterative statistical methods: ordinary Poisson ordered subsets expectation maximization (OPOSEM) and resolution modeled OPOSEM methods. The image reconstruction strategies were evaluated using human data at different count statistics and consequently at different noise levels. In the assessments, 14 [ 11 C]-raclopride dynamic PET studies (test-retest studies of 7 healthy subjects) acquired from the HRRT PET scanner were used. Besides the visual comparisons of the methods, we performed regional quantitative evaluations over the cerebellum, caudate and putamen structures. We compared the regional time-activity curves (TACs), areas under the TACs and binding potential (BP ND ) values. The results showed that the new gap-filling method preserves the linearity of the 3DRP method. Results with the 3DRP after gap-filling method exhibited hardly any dependency on the count statistics (noise levels) in the sinograms while we observed changes in the quantitative results with the EM-based methods for different noise contamination in the data. With this study, we showed that 3DRP with transradial bicubic gap-filling method is feasible for the reconstruction of high-resolution PET data with

Use of regularized algebraic methods in tomographic reconstruction

International Nuclear Information System (INIS)

Koulibaly, P.M.; Darcourt, J.; Blanc-Ferraud, L.; Migneco, O.; Barlaud, M.

1997-01-01

The algebraic methods are used in emission tomography to facilitate the compensation of attenuation and of Compton scattering. We have tested on a phantom the use of a regularization (a priori introduction of information), as well as the taking into account of spatial resolution variation with the depth (SRVD). Hence, we have compared the performances of the two methods by back-projection filtering (BPF) and of the two algebraic methods (AM) in terms of FWHM (by means of a point source), of the reduction of background noise (σ/m) on the homogeneous part of Jaszczak's phantom and of reconstruction speed (time unit = BPF). The BPF methods make use of a grade filter (maximal resolution, no noise treatment), single or associated with a Hann's low-pass (f c = 0.4), as well as of an attenuation correction. The AM which embody attenuation and scattering corrections are, on one side, the OS EM (Ordered Subsets, partitioning and rearranging of the projection matrix; Expectation Maximization) without regularization or SRVD correction, and, on the other side, the OS MAP EM (Maximum a posteriori), regularized and embodying the SRVD correction. A table is given containing for each used method (grade, Hann, OS EM and OS MAP EM) the values of FWHM, σ/m and time, respectively. One can observe that the OS MAP EM algebraic method allows ameliorating both the resolution, by taking into account the SRVD in the reconstruction process and noise treatment by regularization. In addition, due to the OS technique the reconstruction times are acceptable

A novel mechanochemical method for reconstructing the moisture-degraded HKUST-1.

Science.gov (United States)

Sun, Xuejiao; Li, Hao; Li, Yujie; Xu, Feng; Xiao, Jing; Xia, Qibin; Li, Yingwei; Li, Zhong

2015-07-11

A novel mechanochemical method was proposed to reconstruct quickly moisture-degraded HKUST-1. The degraded HKUST-1 can be restored within minutes. The reconstructed samples were characterized, and confirmed to have 95% surface area and 92% benzene capacity of the fresh HKUST-1. It is a simple and effective strategy for degraded MOF reconstruction.

The structure of an earthward propagating magnetic flux rope early in its evolution: comparison of methods

Directory of Open Access Journals (Sweden)

C. Möstl

2009-05-01

Full Text Available We analyze a magnetic signature associated with the leading edge of a bursty bulk flow observed by Cluster at −19 RE downtail on 22 August 2001. A distinct rotation of the magnetic field was seen by all four spacecraft. This event was previously examined by Slavin et al. (2003b using both linear force-free modeling as well as a curlometer technique. Extending this work, we apply here single- and multi-spacecraft Grad-Shafranov (GS reconstruction techniques to the Cluster observations and find good evidence that the structure encountered is indeed a magnetic flux rope and contains helical magnetic field lines. We find that the flux rope has a diameter of approximately 1 RE, an axial field of 26.4 nT, a velocity of ≈650 km/s, a total axial current of 0.16 MA and magnetic fluxes of order 105 Wb. The field line twist is estimated as half a turn per RE. The invariant axis is inclined at 40° to the ecliptic plane and 10° to the GSM equatorial plane. The flux rope has a force-free core and non-force-free boundaries. When we compare and contrast our results with those obtained from minimum variance, single-spacecraft force-free fitting and curlometer techniques, we find in general fair agreement, but also clear differences such as a higher inclination of the axis to the ecliptic. We further conclude that single-spacecraft methods have limitations which should be kept in mind when applied to THEMIS observations, and that non-force-free GS and curlometer techniques are to be preferred in their analysis. Some properties we derived for this earthward– moving structure are similar to those inferred by Lui et al. (2007, using a different approach, for a tailward-moving flux rope observed during the expansion phase of the same substorm.

An analytical transport theory method for calculating flux distribution in slab cells

International Nuclear Information System (INIS)

Abdel Krim, M.S.

2001-01-01

A transport theory method for calculating flux distributions in slab fuel cell is described. Two coupled integral equations for flux in fuel and moderator are obtained; assuming partial reflection at moderator external boundaries. Galerkin technique is used to solve these equations. Numerical results for average fluxes in fuel and moderator and the disadvantage factor are given. Comparison with exact numerical methods, that is for total reflection moderator outer boundaries, show that the Galerkin technique gives accurate results for the disadvantage factor and average fluxes. (orig.)

Theoretical simulation of the dual-heat-flux method in deep body temperature measurements.

Science.gov (United States)

Huang, Ming; Chen, Wenxi

2010-01-01

Deep body temperature reveals individual physiological states, and is important in patient monitoring and chronobiological studies. An innovative dual-heat-flux method has been shown experimentally to be competitive with the conventional zero-heat-flow method in its performance, in terms of measurement accuracy and step response to changes in the deep temperature. We have utilized a finite element method to model and simulate the dynamic process of a dual-heat-flux probe in deep body temperature measurements to validate the fundamental principles of the dual-heat-flux method theoretically, and to acquire a detailed quantitative description of the thermal profile of the dual-heat-flux probe. The simulation results show that the estimated deep body temperature is influenced by the ambient temperature (linearly, at a maximum rate of 0.03 °C/°C) and the blood perfusion rate. The corresponding depth of the estimated temperature in the skin and subcutaneous tissue layer is consistent when using the dual-heat-flux probe. Insights in improving the performance of the dual-heat-flux method were discussed for further studies of dual-heat-flux probes, taking into account structural and geometric considerations.

Environment-based pin-power reconstruction method for homogeneous core calculations

International Nuclear Information System (INIS)

Leroyer, H.; Brosselard, C.; Girardi, E.

2012-01-01

Core calculation schemes are usually based on a classical two-step approach associated with assembly and core calculations. During the first step, infinite lattice assemblies calculations relying on a fundamental mode approach are used to generate cross-sections libraries for PWRs core calculations. This fundamental mode hypothesis may be questioned when dealing with loading patterns involving several types of assemblies (UOX, MOX), burnable poisons, control rods and burn-up gradients. This paper proposes a calculation method able to take into account the heterogeneous environment of the assemblies when using homogeneous core calculations and an appropriate pin-power reconstruction. This methodology is applied to MOX assemblies, computed within an environment of UOX assemblies. The new environment-based pin-power reconstruction is then used on various clusters of 3x3 assemblies showing burn-up gradients and UOX/MOX interfaces, and compared to reference calculations performed with APOLLO-2. The results show that UOX/MOX interfaces are much better calculated with the environment-based calculation scheme when compared to the usual pin-power reconstruction method. The power peak is always better located and calculated with the environment-based pin-power reconstruction method on every cluster configuration studied. This study shows that taking into account the environment in transport calculations can significantly improve the pin-power reconstruction so far as it is consistent with the core loading pattern. (authors)

Phase microscopy using light-field reconstruction method for cell observation.

Science.gov (United States)

Xiu, Peng; Zhou, Xin; Kuang, Cuifang; Xu, Yingke; Liu, Xu

2015-08-01

The refractive index (RI) distribution can serve as a natural label for undyed cell imaging. However, the majority of images obtained through quantitative phase microscopy is integrated along the illumination angle and cannot reflect additional information about the refractive map on a certain plane. Herein, a light-field reconstruction method to image the RI map within a depth of 0.2 μm is proposed. It records quantitative phase-delay images using a four-step phase shifting method in different directions and then reconstructs a similar scattered light field for the refractive sample on the focus plane. It can image the RI of samples, transparent cell samples in particular, in a manner similar to the observation of scattering characteristics. The light-field reconstruction method is therefore a powerful tool for use in cytobiology studies. Copyright © 2015 Elsevier Ltd. All rights reserved.

Fingerprint image reconstruction for swipe sensor using Predictive Overlap Method

Directory of Open Access Journals (Sweden)

Mardiansyah Ahmad Zafrullah

2018-01-01

Full Text Available Swipe sensor is one of many biometric authentication sensor types that widely applied to embedded devices. The sensor produces an overlap on every pixel block of the image, so the picture requires a reconstruction process before heading to the feature extraction process. Conventional reconstruction methods require extensive computation, causing difficult to apply to embedded devices that have limited computing process. In this paper, image reconstruction is proposed using predictive overlap method, which determines the image block shift from the previous set of change data. The experiments were performed using 36 images generated by a swipe sensor with 128 x 8 pixels size of the area, where each image has an overlap in each block. The results reveal computation can increase up to 86.44% compared with conventional methods, with accuracy decreasing to 0.008% in average.

Image Reconstruction Based on Homotopy Perturbation Inversion Method for Electrical Impedance Tomography

Directory of Open Access Journals (Sweden)

Jing Wang

2013-01-01

Full Text Available The image reconstruction for electrical impedance tomography (EIT mathematically is a typed nonlinear ill-posed inverse problem. In this paper, a novel iteration regularization scheme based on the homotopy perturbation technique, namely, homotopy perturbation inversion method, is applied to investigate the EIT image reconstruction problem. To verify the feasibility and effectiveness, simulations of image reconstruction have been performed in terms of considering different locations, sizes, and numbers of the inclusions, as well as robustness to data noise. Numerical results indicate that this method can overcome the numerical instability and is robust to data noise in the EIT image reconstruction. Moreover, compared with the classical Landweber iteration method, our approach improves the convergence rate. The results are promising.

A Spatial-Temporal Comparison of Lake Mendota CO2 Fluxes and Collection Methods

Science.gov (United States)

Baldocchi, A. K.; Reed, D. E.; Desai, A. R.; Loken, L. C.; Schramm, P.; Stanley, E. H.

2017-12-01

Monitoring of carbon fluxes at the lake/atmosphere interface can help us determine baselines from which to understand responses in both space and time that may result from our warming climate or increasing nutrient inputs. Since recent research has shown lakes to be hotspots of global carbon cycling, it is important to quantify carbon sink and source dynamics as well as to verify observations between multiple methods in the context of long-term data collection efforts. Here we evaluate a new method for measuring space and time variation in CO2 fluxes based on novel speedboat-based collection method of aquatic greenhouse gas concentrations and a flux computation and interpolation algorithm. Two-hundred and forty-nine consecutive days of spatial flux maps over the 2016 open ice period were compared to ongoing eddy covariance tower flux measurements on the shore of Lake Mendota, Wisconsin US using a flux footprint analysis. Spatial and temporal alignments of the fluxes from these two observational datasets revealed both similar trends from daily to seasonal timescales as well as biases between methods. For example, throughout the Spring carbon fluxes showed strong correlation although off by an order of magnitude. Isolating physical patterns of agreement between the two methods of the lake/atmosphere CO2 fluxes allows us to pinpoint where biology and physical drivers contribute to the global carbon cycle and help improve modelling of lakes and utilize lakes as leading indicators of climate change.

Variability in CT lung-nodule volumetry: Effects of dose reduction and reconstruction methods.

Science.gov (United States)

Young, Stefano; Kim, Hyun J Grace; Ko, Moe Moe; Ko, War War; Flores, Carlos; McNitt-Gray, Michael F

2015-05-01

Measuring the size of nodules on chest CT is important for lung cancer staging and measuring therapy response. 3D volumetry has been proposed as a more robust alternative to 1D and 2D sizing methods. There have also been substantial advances in methods to reduce radiation dose in CT. The purpose of this work was to investigate the effect of dose reduction and reconstruction methods on variability in 3D lung-nodule volumetry. Reduced-dose CT scans were simulated by applying a noise-addition tool to the raw (sinogram) data from clinically indicated patient scans acquired on a multidetector-row CT scanner (Definition Flash, Siemens Healthcare). Scans were simulated at 25%, 10%, and 3% of the dose of their clinical protocol (CTDIvol of 20.9 mGy), corresponding to CTDIvol values of 5.2, 2.1, and 0.6 mGy. Simulated reduced-dose data were reconstructed with both conventional filtered backprojection (B45 kernel) and iterative reconstruction methods (SAFIRE: I44 strength 3 and I50 strength 3). Three lab technologist readers contoured "measurable" nodules in 33 patients under each of the different acquisition/reconstruction conditions in a blinded study design. Of the 33 measurable nodules, 17 were used to estimate repeatability with their clinical reference protocol, as well as interdose and inter-reconstruction-method reproducibilities. The authors compared the resulting distributions of proportional differences across dose and reconstruction methods by analyzing their means, standard deviations (SDs), and t-test and F-test results. The clinical-dose repeatability experiment yielded a mean proportional difference of 1.1% and SD of 5.5%. The interdose reproducibility experiments gave mean differences ranging from -5.6% to -1.7% and SDs ranging from 6.3% to 9.9%. The inter-reconstruction-method reproducibility experiments gave mean differences of 2.0% (I44 strength 3) and -0.3% (I50 strength 3), and SDs were identical at 7.3%. For the subset of repeatability cases, inter-reconstruction-method

Comparison of Force Reconstruction Methods for a Lumped Mass Beam

Directory of Open Access Journals (Sweden)

Vesta I. Bateman

1997-01-01

Full Text Available Two extensions of the force reconstruction method, the sum of weighted accelerations technique (SWAT, are presented in this article. SWAT requires the use of the structure’s elastic mode shapes for reconstruction of the applied force. Although based on the same theory, the two new techniques do not rely on mode shapes to reconstruct the applied force and may be applied to structures whose mode shapes are not available. One technique uses the measured force and acceleration responses with the rigid body mode shapes to calculate the scalar weighting vector, so the technique is called SWAT-CAL (SWAT using a calibrated force input. The second technique uses the free-decay time response of the structure with the rigid body mode shapes to calculate the scalar weighting vector and is called SWAT-TEEM (SWAT using time eliminated elastic modes. All three methods are used to reconstruct forces for a simple structure.

Low rank alternating direction method of multipliers reconstruction for MR fingerprinting.

Science.gov (United States)

Assländer, Jakob; Cloos, Martijn A; Knoll, Florian; Sodickson, Daniel K; Hennig, Jürgen; Lattanzi, Riccardo

2018-01-01

The proposed reconstruction framework addresses the reconstruction accuracy, noise propagation and computation time for magnetic resonance fingerprinting. Based on a singular value decomposition of the signal evolution, magnetic resonance fingerprinting is formulated as a low rank (LR) inverse problem in which one image is reconstructed for each singular value under consideration. This LR approximation of the signal evolution reduces the computational burden by reducing the number of Fourier transformations. Also, the LR approximation improves the conditioning of the problem, which is further improved by extending the LR inverse problem to an augmented Lagrangian that is solved by the alternating direction method of multipliers. The root mean square error and the noise propagation are analyzed in simulations. For verification, in vivo examples are provided. The proposed LR alternating direction method of multipliers approach shows a reduced root mean square error compared to the original fingerprinting reconstruction, to a LR approximation alone and to an alternating direction method of multipliers approach without a LR approximation. Incorporating sensitivity encoding allows for further artifact reduction. The proposed reconstruction provides robust convergence, reduced computational burden and improved image quality compared to other magnetic resonance fingerprinting reconstruction approaches evaluated in this study. Magn Reson Med 79:83-96, 2018. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

Is X-ray emissivity constant on magnetic flux surfaces?

International Nuclear Information System (INIS)

Granetz, R.S.; Borras, M.C.

1997-01-01

Knowledge of the elongations and shifts of internal magnetic flux surfaces can be used to determine the q profile in elongated tokamak plasmas. X-ray tomography is thought to be a reasonable technique for independently measuring internal flux surface shapes, because it is widely believed that X-ray emissivity should be constant on a magnetic flux surface. In the Alcator C-Mod tokamak, the X-ray tomography diagnostic system consists of four arrays of 38 chords each. A comparison of reconstructed X-ray contours with magnetic flux surfaces shows a small but consistent discrepancy in the radial profile of elongation. Numerous computational tests have been performed to verify these findings, including tests of the sensitivity to calibration and viewing geometry errors, the accuracy of the tomography reconstruction algorithms, and other subtler effects. We conclude that the discrepancy between the X-ray contours and the magnetic flux surfaces is real, leading to the conclusion that X-ray emissivity is not exactly constant on a flux surface. (orig.)

Multiobjective flux balancing using the NISE method for metabolic network analysis.

Science.gov (United States)

Oh, Young-Gyun; Lee, Dong-Yup; Lee, Sang Yup; Park, Sunwon

2009-01-01

Flux balance analysis (FBA) is well acknowledged as an analysis tool of metabolic networks in the framework of metabolic engineering. However, FBA has a limitation for solving a multiobjective optimization problem which considers multiple conflicting objectives. In this study, we propose a novel multiobjective flux balance analysis method, which adapts the noninferior set estimation (NISE) method (Solanki et al., 1993) for multiobjective linear programming (MOLP) problems. NISE method can generate an approximation of the Pareto curve for conflicting objectives without redundant iterations of single objective optimization. Furthermore, the flux distributions at each Pareto optimal solution can be obtained for understanding the internal flux changes in the metabolic network. The functionality of this approach is shown by applying it to a genome-scale in silico model of E. coli. Multiple objectives for the poly(3-hydroxybutyrate) [P(3HB)] production are considered simultaneously, and relationships among them are identified. The Pareto curve for maximizing succinic acid production vs. maximizing biomass production is used for the in silico analysis of various combinatorial knockout strains. This proposed method accelerates the strain improvement in the metabolic engineering by reducing computation time of obtaining the Pareto curve and analysis time of flux distribution at each Pareto optimal solution. (c) 2009 American Institute of Chemical Engineers Biotechnol. Prog., 2009.

Edge-promoting reconstruction of absorption and diffusivity in optical tomography

DEFF Research Database (Denmark)

Hannukainen, A.; Harhanen, Lauri Oskari; Hyvönen, N.

2015-01-01

In optical tomography a physical body is illuminated with near-infrared light and the resulting outward photon flux is measured at the object boundary. The goal is to reconstruct internal optical properties of the body, such as absorption and diffusivity. In this work, it is assumed that the imaged...... measurement noise model. The method is based on iteratively combining a lagged diffusivity step and a linearization of the measurement model of diffuse optical tomography with priorconditioned LSQR. The performance of the reconstruction technique is tested via three-dimensional numerical experiments...

Effect of chamber enclosure time on soil respiration flux: A comparison of linear and non-linear flux calculation methods

DEFF Research Database (Denmark)

Kandel, Tanka P; Lærke, Poul Erik; Elsgaard, Lars

2016-01-01

One of the shortcomings of closed chamber methods for soil respiration (SR) measurements is the decreased CO2 diffusion rate from soil to chamber headspace that may occur due to increased chamber CO2 concentrations. This feedback on diffusion rate may lead to underestimation of pre-deployment flu......One of the shortcomings of closed chamber methods for soil respiration (SR) measurements is the decreased CO2 diffusion rate from soil to chamber headspace that may occur due to increased chamber CO2 concentrations. This feedback on diffusion rate may lead to underestimation of pre...... was placed on fixed collars, and CO2 concentration in the chamber headspace were recorded at 1-s intervals for 45 min. Fluxes were measured in different soil types (sandy, sandy loam and organic soils), and for various manipulations (tillage, rain and drought) and soil conditions (temperature and moisture......) to obtain a range of fluxes with different shapes of flux curves. The linear method provided more stable flux results during short enclosure times (few min) but underestimated initial fluxes by 15–300% after 45 min deployment time. Non-linear models reduced the underestimation as average underestimation...

Application of Symmetry Adapted Function Method for Three-Dimensional Reconstruction of Octahedral Biological Macromolecules

Directory of Open Access Journals (Sweden)

Songjun Zeng

2010-01-01

Full Text Available A method for three-dimensional (3D reconstruction of macromolecule assembles, that is, octahedral symmetrical adapted functions (OSAFs method, was introduced in this paper and a series of formulations for reconstruction by OSAF method were derived. To verify the feasibility and advantages of the method, two octahedral symmetrical macromolecules, that is, heat shock protein Degp24 and the Red-cell L Ferritin, were utilized as examples to implement reconstruction by the OSAF method. The schedule for simulation was designed as follows: 2000 random orientated projections of single particles with predefined Euler angles and centers of origins were generated, then different levels of noises that is signal-to-noise ratio (S/N =0.1,0.5, and 0.8 were added. The structures reconstructed by the OSAF method were in good agreement with the standard models and the relative errors of the structures reconstructed by the OSAF method to standard structures were very little even for high level noise. The facts mentioned above account for that the OSAF method is feasible and efficient approach to reconstruct structures of macromolecules and have ability to suppress the influence of noise.

Temperature and heat flux changes at the base of Laurentide ice sheet inferred from geothermal data (evidence from province of Alberta, Canada)

Science.gov (United States)

Demezhko, Dmitry; Gornostaeva, Anastasia; Majorowicz, Jacek; Šafanda, Jan

2018-01-01

Using a previously published temperature log of the 2363-m-deep borehole Hunt well (Alberta, Canada) and the results of its previous interpretation, the new reconstructions of ground surface temperature and surface heat flux histories for the last 30 ka have been obtained. Two ways to adjust the timescale of geothermal reconstructions are discussed, namely the traditional method based on the a priori data on thermal diffusivity value, and the alternative one including the orbital tuning of the surface heat flux and the Earth's insolation changes. It is shown that the second approach provides better agreement between geothermal reconstructions and proxy evidences of deglaciation chronology in the studied region.

A simulation of portable PET with a new geometric image reconstruction method

Energy Technology Data Exchange (ETDEWEB)

Kawatsu, Shoji [Department of Radiology, Kyoritu General Hospital, 4-33 Go-bancho, Atsuta-ku, Nagoya-shi, Aichi 456 8611 (Japan): Department of Brain Science and Molecular Imaging, National Institute for Longevity Sciences, National Center for Geriatrics and Gerontology, 36-3, Gengo Moriaka-cho, Obu-shi, Aichi 474 8522 (Japan)]. E-mail: b6rgw@fantasy.plala.or.jp; Ushiroya, Noboru [Department of General Education, Wakayama National College of Technology, 77 Noshima, Nada-cho, Gobo-shi, Wakayama 644 0023 (Japan)

2006-12-20

A new method is proposed for three-dimensional positron emission tomography image reconstruction. The method uses the elementary geometric property of line of response whereby two lines of response, which originate from radioactive isotopes in the same position, lie within a few millimeters distance of each other. The method differs from the filtered back projection method and the iterative reconstruction method. The method is applied to a simulation of portable positron emission tomography.

Improved vertical streambed flux estimation using multiple diurnal temperature methods in series

Science.gov (United States)

Irvine, Dylan J.; Briggs, Martin A.; Cartwright, Ian; Scruggs, Courtney; Lautz, Laura K.

2017-01-01

Analytical solutions that use diurnal temperature signals to estimate vertical fluxes between groundwater and surface water based on either amplitude ratios (Ar) or phase shifts (Δϕ) produce results that rarely agree. Analytical solutions that simultaneously utilize Ar and Δϕ within a single solution have more recently been derived, decreasing uncertainty in flux estimates in some applications. Benefits of combined (ArΔϕ) methods also include that thermal diffusivity and sensor spacing can be calculated. However, poor identification of either Ar or Δϕ from raw temperature signals can lead to erratic parameter estimates from ArΔϕ methods. An add-on program for VFLUX 2 is presented to address this issue. Using thermal diffusivity selected from an ArΔϕ method during a reliable time period, fluxes are recalculated using an Ar method. This approach maximizes the benefits of the Ar and ArΔϕ methods. Additionally, sensor spacing calculations can be used to identify periods with unreliable flux estimates, or to assess streambed scour. Using synthetic and field examples, the use of these solutions in series was particularly useful for gaining conditions where fluxes exceeded 1 m/d.

An External Wire Frame Fixation Method of Skin Grafting for Burn Reconstruction.

Science.gov (United States)

Yoshino, Yukiko; Ueda, Hyakuzoh; Ono, Simpei; Ogawa, Rei

2017-06-28

The skin graft is a prevalent reconstructive method for burn injuries. We have been applying external wire frame fixation methods in combination with skin grafts since 1986 and have experienced better outcomes in percentage of successful graft take. The overall purpose of this method was to further secure skin graft adherence to wound beds in hard to stabilize areas. There are also location-specific benefits to this technique such as eliminating the need of tarsorrhaphy in periorbital area, allowing immediate food intake after surgery in perioral area, and performing less invasive fixing methods in digits, and so on. The purpose of this study was to clarify its benefits and applicable locations. We reviewed 22 postburn patients with skin graft reconstructions using the external wire frame method at our institution from December 2012 through September 2016. Details of the surgical technique and individual reports are also discussed. Of the 22 cases, 15 (68%) were split-thickness skin grafts and 7 (32%) were full-thickness skin grafts. Five cases (23%) involved periorbital reconstruction, 5 (23%) involved perioral reconstruction, 2 (9%) involved lower limb reconstruction, and 10 (45%) involved digital reconstruction. Complete (100%) survival of the skin graft was attained in all cases. No signs of complication were observed. With 30 years of experiences all combined, we have summarized fail-proof recommendations to a successful graft survival with an emphasis on the locations of its application.

SU-D-206-03: Segmentation Assisted Fast Iterative Reconstruction Method for Cone-Beam CT

International Nuclear Information System (INIS)

Wu, P; Mao, T; Gong, S; Wang, J; Niu, T; Sheng, K; Xie, Y

2016-01-01

Purpose: Total Variation (TV) based iterative reconstruction (IR) methods enable accurate CT image reconstruction from low-dose measurements with sparse projection acquisition, due to the sparsifiable feature of most CT images using gradient operator. However, conventional solutions require large amount of iterations to generate a decent reconstructed image. One major reason is that the expected piecewise constant property is not taken into consideration at the optimization starting point. In this work, we propose an iterative reconstruction method for cone-beam CT (CBCT) using image segmentation to guide the optimization path more efficiently on the regularization term at the beginning of the optimization trajectory. Methods: Our method applies general knowledge that one tissue component in the CT image contains relatively uniform distribution of CT number. This general knowledge is incorporated into the proposed reconstruction using image segmentation technique to generate the piecewise constant template on the first-pass low-quality CT image reconstructed using analytical algorithm. The template image is applied as an initial value into the optimization process. Results: The proposed method is evaluated on the Shepp-Logan phantom of low and high noise levels, and a head patient. The number of iterations is reduced by overall 40%. Moreover, our proposed method tends to generate a smoother reconstructed image with the same TV value. Conclusion: We propose a computationally efficient iterative reconstruction method for CBCT imaging. Our method achieves a better optimization trajectory and a faster convergence behavior. It does not rely on prior information and can be readily incorporated into existing iterative reconstruction framework. Our method is thus practical and attractive as a general solution to CBCT iterative reconstruction. This work is supported by the Zhejiang Provincial Natural Science Foundation of China (Grant No. LR16F010001), National High-tech R

SU-D-206-03: Segmentation Assisted Fast Iterative Reconstruction Method for Cone-Beam CT

Energy Technology Data Exchange (ETDEWEB)

Wu, P; Mao, T; Gong, S; Wang, J; Niu, T [Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Institute of Translational Medicine, Zhejiang University, Hangzhou, Zhejiang (China); Sheng, K [Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, CA (United States); Xie, Y [Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong (China)

2016-06-15

Purpose: Total Variation (TV) based iterative reconstruction (IR) methods enable accurate CT image reconstruction from low-dose measurements with sparse projection acquisition, due to the sparsifiable feature of most CT images using gradient operator. However, conventional solutions require large amount of iterations to generate a decent reconstructed image. One major reason is that the expected piecewise constant property is not taken into consideration at the optimization starting point. In this work, we propose an iterative reconstruction method for cone-beam CT (CBCT) using image segmentation to guide the optimization path more efficiently on the regularization term at the beginning of the optimization trajectory. Methods: Our method applies general knowledge that one tissue component in the CT image contains relatively uniform distribution of CT number. This general knowledge is incorporated into the proposed reconstruction using image segmentation technique to generate the piecewise constant template on the first-pass low-quality CT image reconstructed using analytical algorithm. The template image is applied as an initial value into the optimization process. Results: The proposed method is evaluated on the Shepp-Logan phantom of low and high noise levels, and a head patient. The number of iterations is reduced by overall 40%. Moreover, our proposed method tends to generate a smoother reconstructed image with the same TV value. Conclusion: We propose a computationally efficient iterative reconstruction method for CBCT imaging. Our method achieves a better optimization trajectory and a faster convergence behavior. It does not rely on prior information and can be readily incorporated into existing iterative reconstruction framework. Our method is thus practical and attractive as a general solution to CBCT iterative reconstruction. This work is supported by the Zhejiang Provincial Natural Science Foundation of China (Grant No. LR16F010001), National High-tech R

Tabular method of critical heat flux description in square packing rod bundles

International Nuclear Information System (INIS)

Bobkov, V.P.; Smogalev, I.P.

2003-01-01

Elaborations of harnessing tabular method for the description and calculation of critical heat fluxes in square packing rod bundles are presented. The tabular method for fuel rod triangular assemblies derived from using basic table for critical heat fluxes in triangular fuel assemblies demonstrates good results. For the harnessing tabular method in square packing rod bundles correction functions reflecting specific geometry were found. Comparative evaluations of calculated values for the critical heat fluxes with experimental ones are presented. Good agreement of calculations with experiments is noted in all range of parameters [ru

Digital signal processing control of induction machine`s torque and stator flux utilizing the direct stator flux field orientation method

Energy Technology Data Exchange (ETDEWEB)

Seiz, Julie Burger [Union College, Schenectady, NY (United States)

1997-04-01

This paper presents a review of the Direct Stator Flux Field Orientation control method. This method can be used to control an induction motor`s torque and flux directly and is the application of interest for this thesis. This control method is implemented without the traditional feedback loops and associated hardware. Predictions are made, by mathematical calculations, of the stator voltage vector. The voltage vector is determined twice a switching period. The switching period is fixed throughout the analysis. The three phase inverter duty cycle necessary to control the torque and flux of the induction machine is determined by the voltage space vector Pulse Width Modulation (PWM) technique. Transient performance of either the flux or torque requires an alternate modulation scheme which is also addressed in this thesis. A block diagram of this closed loop system is provided. 22 figs., 7 tabs.

Image reconstruction methods for the PBX-M pinhole camera

International Nuclear Information System (INIS)

Holland, A.; Powell, E.T.; Fonck, R.J.

1990-03-01

This paper describes two methods which have been used to reconstruct the soft x-ray emission profile of the PBX-M tokamak from the projected images recorded by the PBX-M pinhole camera. Both methods must accurately represent the shape of the reconstructed profile while also providing a degree of immunity to noise in the data. The first method is a simple least squares fit to the data. This has the advantage of being fast and small, and thus easily implemented on the PDP-11 computer used to control the video digitizer for the pinhole camera. The second method involves the application of a maximum entropy algorithm to an overdetermined system. This has the advantage of allowing the use of a default profile. This profile contains additional knowledge about the plasma shape which can be obtained from equilibrium fits to the external magnetic measurements. Additionally the reconstruction is guaranteed positive, and the fit to the data can be relaxed by specifying both the amount and distribution of noise in the image. The algorithm described has the advantage of being considerably faster, for an overdetermined system, than the usual Lagrange multiplier approach to finding the maximum entropy solution. 13 refs., 24 figs

Measurement of absolute neutron flux in LWSCR based on the nuclear track method

International Nuclear Information System (INIS)

Sadeghzadeh, J.; Nassiri Mofakham, N.; Khajehmiri, Z.

2012-01-01

Highlights: ► Up to now the spectral parameters of thermal neutrons are measured with activation foils that are not always reliable in low flux systems. ► We applied a solid state nuclear track detector to measure the absolute neutron flux in the light water sub-critical reactor (LWSCR). ► Experiments concerning fission track detecting were performed and were investigated using the Monte Carlo code MCNP. ► The neutron fluxes obtained in experiment are in fairly good agreement with the results obtained by MCNP. - Abstract: In the present paper, a solid state nuclear track detector is applied to measure the absolute neutron flux in the light water sub-critical reactor (LWSCR) in Nuclear Science and Technology Research Institute (NSTRI). Up to now, the spectral parameters of thermal neutrons have been measured with activation foils that are not always reliable in low flux systems. The method investigated here is the irradiation method. Experiments concerning fission track detecting were performed. The experiment including neutron flux calculation method has also been investigated using the Monte Carlo code MCNP. The analysis shows that the values of neutron flux obtained by experiment are in fairly good agreement with the results obtained by MCNP. Thus, this method may be able to predict the absolute value of neutron flux at LWSCR and other similar reactors.

Review of unfolding methods for neutron flux dosimetry

International Nuclear Information System (INIS)

Stallmann, F.W.; Kam, F.B.K.

1975-01-01

The primary method in reactor dosimetry is the foil activation technique. To translate the activation measurements into neutron fluxes, a special data processing technique called unfolding is needed. Some general observations about the problems and the reliability of this approach to reactor dosimetry are presented. Current unfolding methods are reviewed. 12 references. (auth)

Two-wavelength Method Estimates Heat fluxes over Heterogeneous Surface in North-China

Science.gov (United States)

Zhang, G.; Zheng, N.; Zhang, J.

2017-12-01

Heat fluxes is a key process of hydrological and heat transfer of soil-plant-atmosphere continuum (SPAC), and now it is becoming an important topic in meteorology, hydrology, ecology and other related research areas. Because the temporal and spatial variation of fluxes at regional scale is very complicated, it is still difficult to measure fluxes at the kilometer scale over a heterogeneous surface. A technique called "two-wavelength method" which combines optical scintillometer with microwave scintillometer is able to measure both sensible and latent heat fluxes over large spatial scales at the same time. The main purpose of this study is to investigate the fluxes over non-uniform terrain in North-China. Estimation of heat fluxes was carried out with the optical-microwave scintillometer and an eddy covariance (EC) system over heterogeneous surface in Tai Hang Mountains, China. EC method was set as a benchmark in the study. Structure parameters obtained from scintillometer showed that the typical measurement values of Cn2 are around 10-13 m-2/3 for microwave scintillometer, and values of Cn2 were around 10-15 m-2/3 for optical scintillometer. The correlation of heat fluxes (H) derived from scintillometer and EC system showed as a ratio of 1.05,and with R2=0.75, while the correlation of latent heat fluxes (LE) showed as 1.29 with R2=0.67. It was also found that heat fluxes derived from the two system showed good agreement (R2=0.9 for LE, R2=0.97 for H) when the Bowen ratio (β) was 1.03, while discrepancies showed significantly when β=0.75, and RMSD in H was 139.22 W/m2, 230.85 W/m2 in LE respectively.Experiment results in our research shows that, the two-wavelength method gives a larger heat fluxes over the study area, and a deeper study should be conduct. We expect that our investigate and analysis can be promoted the application of scintillometry method in regional evapotranspiration measurements and relevant disciplines.

Variationally derived coarse mesh methods using an alternative flux representation

International Nuclear Information System (INIS)

Wojtowicz, G.; Holloway, J.P.

1995-01-01

Investigation of a previously reported variational technique for the solution of the 1-D, 1-group neutron transport equation in reactor lattices has inspired the development of a finite element formulation of the method. Compared to conventional homogenization methods in which node homogenized cross sections are used, the coefficients describing this system take on greater spatial dependence. However, the methods employ an alternative flux representation which allows the transport equation to be cast into a form whose solution has only a slow spatial variation and, hence, requires relatively few variables to describe. This alternative flux representation and the stationary property of a variational principle define a class of coarse mesh discretizations of transport theory capable of achieving order of magnitude reductions of eigenvalue and pointwise scalar flux errors as compared with diffusion theory while retaining diffusion theory's relatively low cost. Initial results of a 1-D spectral element approach are reviewed and used to motivate the finite element implementation which is more efficient and almost as accurate; one and two group results of this method are described

Quartet-net: a quartet-based method to reconstruct phylogenetic networks.

Science.gov (United States)

Yang, Jialiang; Grünewald, Stefan; Wan, Xiu-Feng

2013-05-01

Phylogenetic networks can model reticulate evolutionary events such as hybridization, recombination, and horizontal gene transfer. However, reconstructing such networks is not trivial. Popular character-based methods are computationally inefficient, whereas distance-based methods cannot guarantee reconstruction accuracy because pairwise genetic distances only reflect partial information about a reticulate phylogeny. To balance accuracy and computational efficiency, here we introduce a quartet-based method to construct a phylogenetic network from a multiple sequence alignment. Unlike distances that only reflect the relationship between a pair of taxa, quartets contain information on the relationships among four taxa; these quartets provide adequate capacity to infer a more accurate phylogenetic network. In applications to simulated and biological data sets, we demonstrate that this novel method is robust and effective in reconstructing reticulate evolutionary events and it has the potential to infer more accurate phylogenetic distances than other conventional phylogenetic network construction methods such as Neighbor-Joining, Neighbor-Net, and Split Decomposition. This method can be used in constructing phylogenetic networks from simple evolutionary events involving a few reticulate events to complex evolutionary histories involving a large number of reticulate events. A software called "Quartet-Net" is implemented and available at http://sysbio.cvm.msstate.edu/QuartetNet/.

Total variation superiorized conjugate gradient method for image reconstruction

Science.gov (United States)

Zibetti, Marcelo V. W.; Lin, Chuan; Herman, Gabor T.

2018-03-01

The conjugate gradient (CG) method is commonly used for the relatively-rapid solution of least squares problems. In image reconstruction, the problem can be ill-posed and also contaminated by noise; due to this, approaches such as regularization should be utilized. Total variation (TV) is a useful regularization penalty, frequently utilized in image reconstruction for generating images with sharp edges. When a non-quadratic norm is selected for regularization, as is the case for TV, then it is no longer possible to use CG. Non-linear CG is an alternative, but it does not share the efficiency that CG shows with least squares and methods such as fast iterative shrinkage-thresholding algorithms (FISTA) are preferred for problems with TV norm. A different approach to including prior information is superiorization. In this paper it is shown that the conjugate gradient method can be superiorized. Five different CG variants are proposed, including preconditioned CG. The CG methods superiorized by the total variation norm are presented and their performance in image reconstruction is demonstrated. It is illustrated that some of the proposed variants of the superiorized CG method can produce reconstructions of superior quality to those produced by FISTA and in less computational time, due to the speed of the original CG for least squares problems. In the Appendix we examine the behavior of one of the superiorized CG methods (we call it S-CG); one of its input parameters is a positive number ɛ. It is proved that, for any given ɛ that is greater than the half-squared-residual for the least squares solution, S-CG terminates in a finite number of steps with an output for which the half-squared-residual is less than or equal to ɛ. Importantly, it is also the case that the output will have a lower value of TV than what would be provided by unsuperiorized CG for the same value ɛ of the half-squared residual.

Heat flux estimation in an infrared experimental furnace using an inverse method

International Nuclear Information System (INIS)

Le Bideau, P.; Ploteau, J.P.; Glouannec, P.

2009-01-01

Infrared emitters are widely used in industrial furnaces for thermal treatment. In these processes, the knowledge of the incident heat flux on the surface of the product is a primary step to optimise the command emitters and for maintenance shift. For these reasons, it is necessary to develop autonomous flux meters that could provide an answer to these requirements. These sensors must give an in-line distribution of infrared irradiation in the tunnel furnace and must be able to measure high heat flux in severe thermal environments. In this paper we present a method for in-line assessments solving an inverse heat conduction problem. A metallic mass is instrumented by thermocouples and an inverse method allows the incident heat flux to be estimated. In the first part, attention is focused on a new design tool, which is a numerical code, for the evaluation of potential options during captor conception. In the second part we present the realization and the test of this 'indirect' flux meter and its associated inverse problem. 'Direct' detectors based on thermoelectric devices are compared with this new flux meter in the same conditions in the same furnace. Results prove that this technique is a reliable method, appropriate for high temperature ambiances. This technique can be applied to furnaces where the heat flux is inaccessible to 'direct' measurements.

Analysis on the reconstruction accuracy of the Fitch method for inferring ancestral states

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Grünewald Stefan

2011-01-01

Full Text Available Abstract Background As one of the most widely used parsimony methods for ancestral reconstruction, the Fitch method minimizes the total number of hypothetical substitutions along all branches of a tree to explain the evolution of a character. Due to the extensive usage of this method, it has become a scientific endeavor in recent years to study the reconstruction accuracies of the Fitch method. However, most studies are restricted to 2-state evolutionary models and a study for higher-state models is needed since DNA sequences take the format of 4-state series and protein sequences even have 20 states. Results In this paper, the ambiguous and unambiguous reconstruction accuracy of the Fitch method are studied for N-state evolutionary models. Given an arbitrary phylogenetic tree, a recurrence system is first presented to calculate iteratively the two accuracies. As complete binary tree and comb-shaped tree are the two extremal evolutionary tree topologies according to balance, we focus on the reconstruction accuracies on these two topologies and analyze their asymptotic properties. Then, 1000 Yule trees with 1024 leaves are generated and analyzed to simulate real evolutionary scenarios. It is known that more taxa not necessarily increase the reconstruction accuracies under 2-state models. The result under N-state models is also tested. Conclusions In a large tree with many leaves, the reconstruction accuracies of using all taxa are sometimes less than those of using a leaf subset under N-state models. For complete binary trees, there always exists an equilibrium interval [a, b] of conservation probability, in which the limiting ambiguous reconstruction accuracy equals to the probability of randomly picking a state. The value b decreases with the increase of the number of states, and it seems to converge. When the conservation probability is greater than b, the reconstruction accuracies of the Fitch method increase rapidly. The reconstruction

A two-step Hilbert transform method for 2D image reconstruction

International Nuclear Information System (INIS)

Noo, Frederic; Clackdoyle, Rolf; Pack, Jed D

2004-01-01

The paper describes a new accurate two-dimensional (2D) image reconstruction method consisting of two steps. In the first step, the backprojected image is formed after taking the derivative of the parallel projection data. In the second step, a Hilbert filtering is applied along certain lines in the differentiated backprojection (DBP) image. Formulae for performing the DBP step in fan-beam geometry are also presented. The advantage of this two-step Hilbert transform approach is that in certain situations, regions of interest (ROIs) can be reconstructed from truncated projection data. Simulation results are presented that illustrate very similar reconstructed image quality using the new method compared to standard filtered backprojection, and that show the capability to correctly handle truncated projections. In particular, a simulation is presented of a wide patient whose projections are truncated laterally yet for which highly accurate ROI reconstruction is obtained

Comparison of eddy covariance and modified Bowen ratio methods for measuring gas fluxes and implications for measuring fluxes of persistent organic pollutants

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D. J. Bolinius

2016-04-01

Full Text Available Semi-volatile persistent organic pollutants (POPs cycle between the atmosphere and terrestrial surfaces; however measuring fluxes of POPs between the atmosphere and other media is challenging. Sampling times of hours to days are required to accurately measure trace concentrations of POPs in the atmosphere, which rules out the use of eddy covariance techniques that are used to measure gas fluxes of major air pollutants. An alternative, the modified Bowen ratio (MBR method, has been used instead. In this study we used data from FLUXNET for CO2 and water vapor (H2O to compare fluxes measured by eddy covariance to fluxes measured with the MBR method using vertical concentration gradients in air derived from averaged data that simulate the long sampling times typically required to measure POPs. When concentration gradients are strong and fluxes are unidirectional, the MBR method and the eddy covariance method agree within a factor of 3 for CO2, and within a factor of 10 for H2O. To remain within the range of applicability of the MBR method, field studies should be carried out under conditions such that the direction of net flux does not change during the sampling period. If that condition is met, then the performance of the MBR method is neither strongly affected by the length of sample duration nor the use of a fixed value for the transfer coefficient.

Exploring Normalization and Network Reconstruction Methods using In Silico and In Vivo Models

Science.gov (United States)

Abstract: Lessons learned from the recent DREAM competitions include: The search for the best network reconstruction method continues, and we need more complete datasets with ground truth from more complex organisms. It has become obvious that the network reconstruction methods t...

Reconstruction of pin burnup characteristics from nodal calculations in hexagonal geometry

International Nuclear Information System (INIS)

Yang, W.S.; Finck, P.J.; Khalil, H.S.

1990-01-01

A reconstruction method has been developed for recovering pin burnup characteristics from fuel cycle calculations performed in hexagonal-z geometry using the nodal diffusion option of the DIF3D/REBUS-3 code system. Intra-modal distributions of group fluxes, nuclide densities, power density, burnup, and fluence are efficiently computed using polynomial shapes constrained to satisfy nodal information. The accuracy of the method has been tested by performing several numerical benchmark calculations and by comparing predicted local burnups to values measured for experimental assemblies in EBR-11. The results indicate that the reconstruction methods are quite accurate, yielding maximum errors in power and nuclide densities that are less than 2% for driver assemblies and typically less than 5% for blanket assemblies. 14 refs., 2 figs., 5 tabs

A scalar flux - oriented method for the transport equation in slab geometry

International Nuclear Information System (INIS)

Budd, C.

1981-01-01

A new method for solving the neutron transport equation is described. An unusual feature of this method is that it deals principally with scalar fluxes rather than angular fluxes. An alternative approach in slab geometry promises to be cheaper to run and does not suffer from many of the problems of the discrete ordinates method. It also appears possible to extend the method to several dimensions and this is discussed. (U.K.)

Analysis of fracture surface of CFRP material by three-dimensional reconstruction methods

International Nuclear Information System (INIS)

Lobo, Raquel M.; Andrade, Arnaldo H.P.

2009-01-01

Fracture surfaces of CFRP (carbon Fiber Reinforced Polymer) materials, used in the nuclear fuel cycle, presents an elevated roughness, mainly due to the fracture mode known as pulling out, that displays pieces of carbon fibers after debonding between fiber and matrix. The fractographic analysis, by bi-dimensional images is deficient for not considering the so important vertical resolution as much as the horizontal resolution. In this case, the knowledge of this heights distribution that occurs during the breaking, can lead to the calculation of the involved energies in the process that would allows a better agreement on the fracture mechanisms of the composite material. An important solution for the material characterization, whose surface presents a high roughness due to the variation in height, is to reconstruct three-dimensionally these fracture surfaces. In this work, the 3D reconstruction was done by two different methods: the variable focus reconstruction, through a stack of images obtained by optical microscopy (OM) and the parallax reconstruction, carried through with images acquired by scanning electron microscopy (SEM). The results of both methods present an elevation map of the reconstructed image that determine the height of the surface pixel by pixel,. The results obtained by the methods of reconstruction for the CFRP surfaces, have been compared with others materials such as aluminum and copper that present a ductile type fracture surface, with lower roughness. (author)

Filtering of SPECT reconstructions made using Bellini's attenuation correction method

International Nuclear Information System (INIS)

Glick, S.J.; Penney, B.C.; King, M.A.

1991-01-01

This paper evaluates a three-dimensional (3D) Wiener filter which is used to restore SPECT reconstructions which were made using Bellini's method of attenuation correction. Its performance is compared to that of several pre-reconstruction filers: the one-dimensional (1D) Butterworth, the two-dimensional (2D) Butterworth, and a 2D Wiener filer. A simulation study is used to compare the four filtering methods. An approximation to a clinical liver spleen study was used as the source distribution and algorithm which accounts for the depth and distance dependent blurring in SPECT was used to compute noise free projections. To study the effect of filtering method on tumor detection accuracy, a 2 cm diameter, cool spherical tumor (40% contrast) was placed at a known, but random, location with the liver. Projection sets for ten tumor locations were computed and five noise realizations of each set were obtained by introducing Poisson noise. The simulated projections were either: filtered with the 1D or 2D Butterworth or the 2D Wiener and then reconstructed using Bellini's intrinsic attenuation correction, or reconstructed first, then filtered with the 3D Wiener. The criteria used for comparison were: normalized mean square error (NMSE), cold spot contrast, and accuracy of tumor detection with an automated numerical method. Results indicate that restorations obtained with 3D Wiener filtering yielded significantly higher lesion contrast and lower NMSE values compared to the other methods of processing. The Wiener restoration filters and the 2D Butterworth all provided similar measures of detectability, which were noticeably higher than that obtained with 1D Butterworth smoothing

Flux form Semi-Lagrangian methods for parabolic problems

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Bonaventura Luca

2016-09-01

Full Text Available A semi-Lagrangian method for parabolic problems is proposed, that extends previous work by the authors to achieve a fully conservative, flux-form discretization of linear and nonlinear diffusion equations. A basic consistency and stability analysis is proposed. Numerical examples validate the proposed method and display its potential for consistent semi-Lagrangian discretization of advection diffusion and nonlinear parabolic problems.

Reconstruction of Banknote Fragments Based on Keypoint Matching Method.

Science.gov (United States)

Gwo, Chih-Ying; Wei, Chia-Hung; Li, Yue; Chiu, Nan-Hsing

2015-07-01

Banknotes may be shredded by a scrap machine, ripped up by hand, or damaged in accidents. This study proposes an image registration method for reconstruction of multiple sheets of banknotes. The proposed method first constructs different scale spaces to identify keypoints in the underlying banknote fragments. Next, the features of those keypoints are extracted to represent their local patterns around keypoints. Then, similarity is computed to find the keypoint pairs between the fragment and the reference banknote. The banknote fragments can determine the coordinate and amend the orientation. Finally, an assembly strategy is proposed to piece multiple sheets of banknote fragments together. Experimental results show that the proposed method causes, on average, a deviation of 0.12457 ± 0.12810° for each fragment while the SIFT method deviates 1.16893 ± 2.35254° on average. The proposed method not only reconstructs the banknotes but also decreases the computing cost. Furthermore, the proposed method can estimate relatively precisely the orientation of the banknote fragments to assemble. © 2015 American Academy of Forensic Sciences.

Track and vertex reconstruction: From classical to adaptive methods

International Nuclear Information System (INIS)

Strandlie, Are; Fruehwirth, Rudolf

2010-01-01

This paper reviews classical and adaptive methods of track and vertex reconstruction in particle physics experiments. Adaptive methods have been developed to meet the experimental challenges at high-energy colliders, in particular, the CERN Large Hadron Collider. They can be characterized by the obliteration of the traditional boundaries between pattern recognition and statistical estimation, by the competition between different hypotheses about what constitutes a track or a vertex, and by a high level of flexibility and robustness achieved with a minimum of assumptions about the data. The theoretical background of some of the adaptive methods is described, and it is shown that there is a close connection between the two main branches of adaptive methods: neural networks and deformable templates, on the one hand, and robust stochastic filters with annealing, on the other hand. As both classical and adaptive methods of track and vertex reconstruction presuppose precise knowledge of the positions of the sensitive detector elements, the paper includes an overview of detector alignment methods and a survey of the alignment strategies employed by past and current experiments.

Statistical analysis of nonlinearly reconstructed near-infrared tomographic images: Part I--Theory and simulations.

Science.gov (United States)

Pogue, Brian W; Song, Xiaomei; Tosteson, Tor D; McBride, Troy O; Jiang, Shudong; Paulsen, Keith D

2002-07-01

Near-infrared (NIR) diffuse tomography is an emerging method for imaging the interior of tissues to quantify concentrations of hemoglobin and exogenous chromophores non-invasively in vivo. It often exploits an optical diffusion model-based image reconstruction algorithm to estimate spatial property values from measurements of the light flux at the surface of the tissue. In this study, mean-squared error (MSE) over the image is used to evaluate methods for regularizing the ill-posed inverse image reconstruction problem in NIR tomography. Estimates of image bias and image standard deviation were calculated based upon 100 repeated reconstructions of a test image with randomly distributed noise added to the light flux measurements. It was observed that the bias error dominates at high regularization parameter values while variance dominates as the algorithm is allowed to approach the optimal solution. This optimum does not necessarily correspond to the minimum projection error solution, but typically requires further iteration with a decreasing regularization parameter to reach the lowest image error. Increasing measurement noise causes a need to constrain the minimum regularization parameter to higher values in order to achieve a minimum in the overall image MSE.

Development of axisymmetric lattice Boltzmann flux solver for complex multiphase flows

Science.gov (United States)

Wang, Yan; Shu, Chang; Yang, Li-Ming; Yuan, Hai-Zhuan

2018-05-01

This paper presents an axisymmetric lattice Boltzmann flux solver (LBFS) for simulating axisymmetric multiphase flows. In the solver, the two-dimensional (2D) multiphase LBFS is applied to reconstruct macroscopic fluxes excluding axisymmetric effects. Source terms accounting for axisymmetric effects are introduced directly into the governing equations. As compared to conventional axisymmetric multiphase lattice Boltzmann (LB) method, the present solver has the kinetic feature for flux evaluation and avoids complex derivations of external forcing terms. In addition, the present solver also saves considerable computational efforts in comparison with three-dimensional (3D) computations. The capability of the proposed solver in simulating complex multiphase flows is demonstrated by studying single bubble rising in a circular tube. The obtained results compare well with the published data.

A variational synthesis nodal discrete ordinates method

International Nuclear Information System (INIS)

Favorite, J.A.; Stacey, W.M.

1999-01-01

A self-consistent nodal approximation method for computing discrete ordinates neutron flux distributions has been developed from a variational functional for neutron transport theory. The advantage of the new nodal method formulation is that it is self-consistent in its definition of the homogenized nodal parameters, the construction of the global nodal equations, and the reconstruction of the detailed flux distribution. The efficacy of the method is demonstrated by two-dimensional test problems

L{sub 1/2} regularization based numerical method for effective reconstruction of bioluminescence tomography

Energy Technology Data Exchange (ETDEWEB)

Chen, Xueli, E-mail: xlchen@xidian.edu.cn, E-mail: jimleung@mail.xidian.edu.cn; Yang, Defu; Zhang, Qitan; Liang, Jimin, E-mail: xlchen@xidian.edu.cn, E-mail: jimleung@mail.xidian.edu.cn [School of Life Science and Technology, Xidian University, Xi' an 710071 (China); Engineering Research Center of Molecular and Neuro Imaging, Ministry of Education (China)

2014-05-14

Even though bioluminescence tomography (BLT) exhibits significant potential and wide applications in macroscopic imaging of small animals in vivo, the inverse reconstruction is still a tough problem that has plagued researchers in a related area. The ill-posedness of inverse reconstruction arises from insufficient measurements and modeling errors, so that the inverse reconstruction cannot be solved directly. In this study, an l{sub 1/2} regularization based numerical method was developed for effective reconstruction of BLT. In the method, the inverse reconstruction of BLT was constrained into an l{sub 1/2} regularization problem, and then the weighted interior-point algorithm (WIPA) was applied to solve the problem through transforming it into obtaining the solution of a series of l{sub 1} regularizers. The feasibility and effectiveness of the proposed method were demonstrated with numerical simulations on a digital mouse. Stability verification experiments further illustrated the robustness of the proposed method for different levels of Gaussian noise.

Integration of expression data in genome-scale metabolic network reconstructions

Directory of Open Access Journals (Sweden)

Anna S. Blazier

2012-08-01

Full Text Available With the advent of high-throughput technologies, the field of systems biology has amassed an abundance of omics data, quantifying thousands of cellular components across a variety of scales, ranging from mRNA transcript levels to metabolite quantities. Methods are needed to not only integrate this omics data but to also use this data to heighten the predictive capabilities of computational models. Several recent studies have successfully demonstrated how flux balance analysis (FBA, a constraint-based modeling approach, can be used to integrate transcriptomic data into genome-scale metabolic network reconstructions to generate predictive computational models. In this review, we summarize such FBA-based methods for integrating expression data into genome-scale metabolic network reconstructions, highlighting their advantages as well as their limitations.

Quantitative method for measuring heat flux emitted from a cryogenic object

Science.gov (United States)

Duncan, R.V.

1993-03-16

The present invention is a quantitative method for measuring the total heat flux, and of deriving the total power dissipation, of a heat-fluxing object which includes the steps of placing an electrical noise-emitting heat-fluxing object in a liquid helium bath and measuring the superfluid transition temperature of the bath. The temperature of the liquid helium bath is thereafter reduced until some measurable parameter, such as the electrical noise, exhibited by the heat-fluxing object or a temperature-dependent resistive thin film in intimate contact with the heat-fluxing object, becomes greatly reduced. The temperature of the liquid helum bath is measured at this point. The difference between the superfluid transition temperature of the liquid helium bath surrounding the heat-fluxing object, and the temperature of the liquid helium bath when the electrical noise emitted by the heat-fluxing object becomes greatly reduced, is determined. The total heat flux from the heat-fluxing object is determined as a function of this difference between these temperatures. In certain applications, the technique can be used to optimize thermal design parameters of cryogenic electronics, for example, Josephson junction and infrared sensing devices.

Quantitative method for measuring heat flux emitted from a cryogenic object

International Nuclear Information System (INIS)

Duncan, R.V.

1993-01-01

The present invention is a quantitative method for measuring the total heat flux, and of deriving the total power dissipation, of a heat-fluxing object which includes the steps of placing an electrical noise-emitting heat-fluxing object in a liquid helium bath and measuring the superfluid transition temperature of the bath. The temperature of the liquid helium bath is thereafter reduced until some measurable parameter, such as the electrical noise, exhibited by the heat-fluxing object or a temperature-dependent resistive thin film in intimate contact with the heat-fluxing object, becomes greatly reduced. The temperature of the liquid helum bath is measured at this point. The difference between the superfluid transition temperature of the liquid helium bath surrounding the heat-fluxing object, and the temperature of the liquid helium bath when the electrical noise emitted by the heat-fluxing object becomes greatly reduced, is determined. The total heat flux from the heat-fluxing object is determined as a function of this difference between these temperatures. In certain applications, the technique can be used to optimize thermal design parameters of cryogenic electronics, for example, Josephson junction and infrared sensing devices

Flux-weakening control methods for hybrid excitation synchronous motor

Directory of Open Access Journals (Sweden)

Mingming Huang

2015-09-01

Full Text Available The hybrid excitation synchronous motor (HESM, which aim at combining the advantages of permanent magnet motor and wound excitation motor, have the characteristics of low-speed high-torque hill climbing and wide speed range. Firstly, a new kind of HESM is presented in the paper, and its structure and mathematical model are illustrated. Then, based on a space voltage vector control, a novel flux-weakening method for speed adjustment in the high speed region is presented. The unique feature of the proposed control method is that the HESM driving system keeps the q-axis back-EMF components invariable during the flux-weakening operation process. Moreover, a copper loss minimization algorithm is adopted to reduce the copper loss of the HESM in the high speed region. Lastly, the proposed method is validated by the simulation and the experimental results.

Reconstructing the long-term cosmic ray intensity: linear relations do not work

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K. Mursula

2003-04-01

Full Text Available It was recently suggested (Lockwood, 2001 that the cosmic ray intensity in the neutron monitor energy range is linearly related to the coronal source flux, and can be reconstructed for the last 130 years using the long-term coronal flux estimated earlier. Moreover, Lockwood (2001 reconstructed the coronal flux for the last 500 years using a similar linear relation between the flux and the concentration of cosmogenic 10 Be isotopes in polar ice. Here we show that the applied linear relations are oversimplified and lead to unphysical results on long time scales. In particular, the cosmic ray intensity reconstructed by Lockwood (2001 for the last 130 years has a steep trend which is considerably larger than the trend estimated from observations during the last 65 years. Accordingly, the reconstructed cosmic ray intensity reaches or even exceeds the local interstellar cosmic ray flux around 1900. We argue that these unphysical results obtained when using linear relations are due to the oversimplified approach which does not take into account the complex and essentially nonlinear nature of long-term cosmic ray modulation in the heliosphere. We also compare the long-term cosmic ray intensity based on a linear treatment with the reconstruction based on a recent physical model which predicts a considerably lower cosmic ray intensity around 1900.Key words. Interplanetary physics (cosmic rays; heliopause and solar wind termination – Geomagnetism and paleomagnetism (time variations, secular and long-term

Skin sparing mastectomy: Technique and suggested methods of reconstruction

International Nuclear Information System (INIS)

Farahat, A.M.; Hashim, T.; Soliman, H.O.; Manie, T.M.; Soliman, O.M.

2014-01-01

To demonstrate the feasibility and accessibility of performing adequate mastectomy to extirpate the breast tissue, along with en-block formal axillary dissection performed from within the same incision. We also compared different methods of immediate breast reconstruction used to fill the skin envelope to achieve the best aesthetic results. Methods: 38 patients with breast cancer underwent skin-sparing mastectomy with formal axillary clearance, through a circum-areolar incision. Immediate breast reconstruction was performed using different techniques to fill in the skin envelope. Two reconstruction groups were assigned; group 1: Autologus tissue transfer only (n= 24), and group 2: implant augmentation (n= 14). Autologus tissue transfer: The techniques used included filling in the skin envelope using Extended Latissimus Dorsi flap (18 patients) and Pedicled TRAM flap (6 patients). Augmentation with implants: Subpectoral implants(4 patients), a rounded implant placed under the pectoralis major muscle to augment an LD reconstructed breast. LD pocket (10 patients), an anatomical implant placed over the pectoralis major muscle within a pocket created by the LD flap. No contra-lateral procedure was performed in any of the cases to achieve symmetry. Results: All cases underwent adequate excision of the breast tissue along with en-block complete axillary clearance (when indicated), without the need for an additional axillary incision. Eighteen patients underwent reconstruction using extended LD flaps only, six had TRAM flaps, four had augmentation using implants placed below the pectoralis muscle along with LD flaps, and ten had implants placed within the LD pocket. Breast shape, volume and contour were successfully restored in all patients. Adequate degree of ptosis was achieved, to ensure maximal symmetry. Conclusions: Skin Sparing mastectomy through a circum-areolar incision has proven to be a safe and feasible option for the management of breast cancer in Egyptian

Comparison of ecosystem water flux measured with the Eddy covariance- and the direct xylem sap flux method in a mountainous forest

Energy Technology Data Exchange (ETDEWEB)

Stefanicki, G; Geissbuehler, P; Siegwolf, R [Paul Scherrer Inst. (PSI), Villigen (Switzerland)

1999-08-01

The Eddy covariance technique allows to measure different components of turbulent air fluxes, including the flow of water vapour. Sap flux measurements determine directly the water flow in tree stems. We compared the water flux just above the crowns of trees in a forest by the technique of Eddy covariance and the water flux by the xylem sap flux method. These two completely different approaches showed a good qualitative correspondence. The correlation coefficient is 0.8. With an estimation of the crown diameter of the measured tree we also find a very good quantitative agreement. (author) 3 figs., 5 refs.

Theoretical analysis of integral neutron transport equation using collision probability method with quadratic flux approach

International Nuclear Information System (INIS)

Shafii, Mohammad Ali; Meidianti, Rahma; Wildian,; Fitriyani, Dian; Tongkukut, Seni H. J.; Arkundato, Artoto

2014-01-01

Theoretical analysis of integral neutron transport equation using collision probability (CP) method with quadratic flux approach has been carried out. In general, the solution of the neutron transport using the CP method is performed with the flat flux approach. In this research, the CP method is implemented in the cylindrical nuclear fuel cell with the spatial of mesh being conducted into non flat flux approach. It means that the neutron flux at any point in the nuclear fuel cell are considered different each other followed the distribution pattern of quadratic flux. The result is presented here in the form of quadratic flux that is better understanding of the real condition in the cell calculation and as a starting point to be applied in computational calculation

Theoretical analysis of integral neutron transport equation using collision probability method with quadratic flux approach

Energy Technology Data Exchange (ETDEWEB)

Shafii, Mohammad Ali, E-mail: mashafii@fmipa.unand.ac.id; Meidianti, Rahma, E-mail: mashafii@fmipa.unand.ac.id; Wildian,, E-mail: mashafii@fmipa.unand.ac.id; Fitriyani, Dian, E-mail: mashafii@fmipa.unand.ac.id [Department of Physics, Andalas University Padang West Sumatera Indonesia (Indonesia); Tongkukut, Seni H. J. [Department of Physics, Sam Ratulangi University Manado North Sulawesi Indonesia (Indonesia); Arkundato, Artoto [Department of Physics, Jember University Jember East Java Indonesia (Indonesia)

2014-09-30

Theoretical analysis of integral neutron transport equation using collision probability (CP) method with quadratic flux approach has been carried out. In general, the solution of the neutron transport using the CP method is performed with the flat flux approach. In this research, the CP method is implemented in the cylindrical nuclear fuel cell with the spatial of mesh being conducted into non flat flux approach. It means that the neutron flux at any point in the nuclear fuel cell are considered different each other followed the distribution pattern of quadratic flux. The result is presented here in the form of quadratic flux that is better understanding of the real condition in the cell calculation and as a starting point to be applied in computational calculation.

Pore REconstruction and Segmentation (PORES) method for improved porosity quantification of nanoporous materials

Energy Technology Data Exchange (ETDEWEB)

Van Eyndhoven, G., E-mail: geert.vaneyndhoven@uantwerpen.be [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Kurttepeli, M. [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Van Oers, C.J.; Cool, P. [Laboratory of Adsorption and Catalysis, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Bals, S. [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Batenburg, K.J. [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Centrum Wiskunde and Informatica, Science Park 123, NL-1090 GB Amsterdam (Netherlands); Mathematical Institute, Universiteit Leiden, Niels Bohrweg 1, NL-2333 CA Leiden (Netherlands); Sijbers, J. [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium)

2015-01-15

Electron tomography is currently a versatile tool to investigate the connection between the structure and properties of nanomaterials. However, a quantitative interpretation of electron tomography results is still far from straightforward. Especially accurate quantification of pore-space is hampered by artifacts introduced in all steps of the processing chain, i.e., acquisition, reconstruction, segmentation and quantification. Furthermore, most common approaches require subjective manual user input. In this paper, the PORES algorithm “POre REconstruction and Segmentation” is introduced; it is a tailor-made, integral approach, for the reconstruction, segmentation, and quantification of porous nanomaterials. The PORES processing chain starts by calculating a reconstruction with a nanoporous-specific reconstruction algorithm: the Simultaneous Update of Pore Pixels by iterative REconstruction and Simple Segmentation algorithm (SUPPRESS). It classifies the interior region to the pores during reconstruction, while reconstructing the remaining region by reducing the error with respect to the acquired electron microscopy data. The SUPPRESS reconstruction can be directly plugged into the remaining processing chain of the PORES algorithm, resulting in accurate individual pore quantification and full sample pore statistics. The proposed approach was extensively validated on both simulated and experimental data, indicating its ability to generate accurate statistics of nanoporous materials. - Highlights: • An electron tomography reconstruction/segmentation method for nanoporous materials. • The method exploits the porous nature of the scanned material. • Validated extensively on both simulation and real data experiments. • Results in increased image resolution and improved porosity quantification.

Reducing the effects of acoustic heterogeneity with an iterative reconstruction method from experimental data in microwave induced thermoacoustic tomography

International Nuclear Information System (INIS)

Wang, Jinguo; Zhao, Zhiqin; Song, Jian; Chen, Guoping; Nie, Zaiping; Liu, Qing-Huo

2015-01-01

Purpose: An iterative reconstruction method has been previously reported by the authors of this paper. However, the iterative reconstruction method was demonstrated by solely using the numerical simulations. It is essential to apply the iterative reconstruction method to practice conditions. The objective of this work is to validate the capability of the iterative reconstruction method for reducing the effects of acoustic heterogeneity with the experimental data in microwave induced thermoacoustic tomography. Methods: Most existing reconstruction methods need to combine the ultrasonic measurement technology to quantitatively measure the velocity distribution of heterogeneity, which increases the system complexity. Different to existing reconstruction methods, the iterative reconstruction method combines time reversal mirror technique, fast marching method, and simultaneous algebraic reconstruction technique to iteratively estimate the velocity distribution of heterogeneous tissue by solely using the measured data. Then, the estimated velocity distribution is used subsequently to reconstruct the highly accurate image of microwave absorption distribution. Experiments that a target placed in an acoustic heterogeneous environment are performed to validate the iterative reconstruction method. Results: By using the estimated velocity distribution, the target in an acoustic heterogeneous environment can be reconstructed with better shape and higher image contrast than targets that are reconstructed with a homogeneous velocity distribution. Conclusions: The distortions caused by the acoustic heterogeneity can be efficiently corrected by utilizing the velocity distribution estimated by the iterative reconstruction method. The advantage of the iterative reconstruction method over the existing correction methods is that it is successful in improving the quality of the image of microwave absorption distribution without increasing the system complexity

Understanding reconstructed Dante spectra using high resolution spectroscopy

Energy Technology Data Exchange (ETDEWEB)

May, M. J., E-mail: may13@llnl.gov; Widmann, K.; Kemp, G. E.; Thorn, D.; Colvin, J. D.; Schneider, M. B.; Moore, A.; Blue, B. E. [L-170 Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, California 94551 (United States); Weaver, J. [Naval Research Laboratory, 4555 Overlook Ave. SW, Washington, DC 20375 (United States)

2016-11-15

The Dante is an 18 channel filtered diode array used at the National Ignition Facility (NIF) to measure the spectrally and temporally resolved radiation flux between 50 eV and 20 keV from various targets. The absolute flux is determined from the radiometric calibration of the x-ray diodes, filters, and mirrors and a reconstruction algorithm applied to the recorded voltages from each channel. The reconstructed spectra are very low resolution with features consistent with the instrument response and are not necessarily consistent with the spectral emission features from the plasma. Errors may exist between the reconstructed spectra and the actual emission features due to assumptions in the algorithm. Recently, a high resolution convex crystal spectrometer, VIRGIL, has been installed at NIF with the same line of sight as the Dante. Spectra from L-shell Ag and Xe have been recorded by both VIRGIL and Dante. Comparisons of these two spectroscopic measurements yield insights into the accuracy of the Dante reconstructions.

TORT/MCNP coupling method for the calculation of neutron flux around a core of BWR

International Nuclear Information System (INIS)

Kurosawa, M.

2005-01-01

For the analysis of BWR neutronics performance, accurate data are required for neutron flux distribution over the In-Reactor Pressure Vessel equipments taking into account the detailed geometrical arrangement. The TORT code can calculate neutron flux around a core of BWR in a three-dimensional geometry model, but has difficulties in fine geometrical modelling and lacks huge computer resource. On the other hand, the MCNP code enables the calculation of the neutron flux with a detailed geometry model, but requires very long sampling time to give enough number of particles. Therefore, a TORT/MCNP coupling method has been developed to eliminate the two problems mentioned above in each code. In this method, the TORT code calculates angular flux distribution on the core surface and the MCNP code calculates neutron spectrum at the points of interest using the flux distribution. The coupling method will be used as the DOT-DOMINO-MORSE code system. This TORT/MCNP coupling method was applied to calculate the neutron flux at points where induced radioactivity data were measured for 54 Mn and 60 Co and the radioactivity calculations based on the neutron flux obtained from the above method were compared with the measured data. (authors)

TORT/MCNP coupling method for the calculation of neutron flux around a core of BWR.

Science.gov (United States)

Kurosawa, Masahiko

2005-01-01

For the analysis of BWR neutronics performance, accurate data are required for neutron flux distribution over the In-Reactor Pressure Vessel equipments taking into account the detailed geometrical arrangement. The TORT code can calculate neutron flux around a core of BWR in a three-dimensional geometry model, but has difficulties in fine geometrical modelling and lacks huge computer resource. On the other hand, the MCNP code enables the calculation of the neutron flux with a detailed geometry model, but requires very long sampling time to give enough number of particles. Therefore, a TORT/MCNP coupling method has been developed to eliminate the two problems mentioned above in each code. In this method, the TORT code calculates angular flux distribution on the core surface and the MCNP code calculates neutron spectrum at the points of interest using the flux distribution. The coupling method will be used as the DOT-DOMINO-MORSE code system. This TORT/MCNP coupling method was applied to calculate the neutron flux at points where induced radioactivity data were measured for 54Mn and 60Co and the radioactivity calculations based on the neutron flux obtained from the above method were compared with the measured data.

Tomographic reconstruction of storm time RC ion distribution from ENA images on board multiple spacecraft

Science.gov (United States)

Ma, Shu-Ying; Yan, Wei-Nan; Xu, Liang

2015-11-01

A quantitative retrieval of 3-D distribution of energetic ions as energetic neutral atoms (ENA) sources is a challenging task. In this paper the voxel computerized tomography (CT) method is initially applied to reconstruct the 3-D distribution of energetic ions in the magnetospheric ring current (RC) region from ENA emission images on board multiple spacecraft. To weaken the influence of low-altitude emission (LAE) on the reconstruction, the LAE-associated ENA intensities are corrected by invoking the thick-target approximation. To overcome the divergence in iteration due to discordant instrument biases, a differential ENA voxel CT method is developed. The method is proved reliable and advantageous by numerical simulation for the case of constant bias independent of viewing angle. Then this method is implemented with ENA data measured by the Two Wide-angle Imaging Neutral-atom Spectrometers mission which performs stereoscopic ENA imaging. The 3-D spatial distributions and energy spectra of RC ion flux intensity are reconstructed for energies of 4-50 keV during the main phase of a major magnetic storm. The retrieved ion flux distributions seem to correspond to an asymmetric partial RC, located mainly around midnight favoring the postmidnight with L = 3.5-7.0 in the equatorial plane. The RC ion distributions with magnetic local time depend on energy, with major equatorial flux peak for lower energy located east of that for higher energy. In comparison with the ion energy spectra measured by Time History of Events and Macroscale Interactions during Substorms-D satellite flying in the RC region, the retrieved spectrum from remotely sensed ENA images are well matched with the in situ measurements.

Does thorax EIT image analysis depend on the image reconstruction method?

Science.gov (United States)

Zhao, Zhanqi; Frerichs, Inéz; Pulletz, Sven; Müller-Lisse, Ullrich; Möller, Knut

2013-04-01

Different methods were proposed to analyze the resulting images of electrical impedance tomography (EIT) measurements during ventilation. The aim of our study was to examine if the analysis methods based on back-projection deliver the same results when applied on images based on other reconstruction algorithms. Seven mechanically ventilated patients with ARDS were examined by EIT. The thorax contours were determined from the routine CT images. EIT raw data was reconstructed offline with (1) filtered back-projection with circular forward model (BPC); (2) GREIT reconstruction method with circular forward model (GREITC) and (3) GREIT with individual thorax geometry (GREITT). Three parameters were calculated on the resulting images: linearity, global ventilation distribution and regional ventilation distribution. The results of linearity test are 5.03±2.45, 4.66±2.25 and 5.32±2.30 for BPC, GREITC and GREITT, respectively (median ±interquartile range). The differences among the three methods are not significant (p = 0.93, Kruskal-Wallis test). The proportions of ventilation in the right lung are 0.58±0.17, 0.59±0.20 and 0.59±0.25 for BPC, GREITC and GREITT, respectively (p = 0.98). The differences of the GI index based on different reconstruction methods (0.53±0.16, 0.51±0.25 and 0.54±0.16 for BPC, GREITC and GREITT, respectively) are also not significant (p = 0.93). We conclude that the parameters developed for images generated with GREITT are comparable with filtered back-projection and GREITC.

A diffusion-theoretical method to calculate the neutron flux distribution in multisphere configurations

International Nuclear Information System (INIS)

Schuerrer, F.

1980-01-01

For characterizing heterogene configurations of pebble-bed reactors the fine structure of the flux distribution as well as the determination of the macroscopic neutronphysical quantities are of interest. When calculating system parameters of Wigner-Seitz-cells the usual codes for neutron spectra calculation always neglect the modulation of the neutron flux by the influence of neighbouring spheres. To judge the error arising from that procedure it is necessary to determinate the flux distribution in the surrounding of a spherical fuel element. In the present paper an approximation method to calculate the flux distribution in the two-sphere model is developed. This method is based on the exactly solvable problem of the flux determination of a point source of neutrons in an infinite medium, which contains a spherical perturbation zone eccentric to the point source. An iteration method allows by superposing secondary fields and alternately satisfying the conditions of continuity on the surface of each of the two fuel elements to advance to continually improving approximations. (orig.) 891 RW/orig. 892 CKA [de

Equilibrium reconstruction in the TCA/Br tokamak

International Nuclear Information System (INIS)

Sa, Wanderley Pires de

1996-01-01

The accurate and rapid determination of the Magnetohydrodynamic (MHD) equilibrium configuration in tokamaks is a subject for the magnetic confinement of the plasma. With the knowledge of characteristic plasma MHD equilibrium parameters it is possible to control the plasma position during its formation using feed-back techniques. It is also necessary an on-line analysis between successive discharges to program external parameters for the subsequent discharges. In this work it is investigated the MHD equilibrium configuration reconstruction of the TCA/BR tokamak from external magnetic measurements, using a method that is able to fast determine the main parameters of discharge. The thesis has two parts. Firstly it is presented the development of an equilibrium code that solves de Grad-Shafranov equation for the TCA/BR tokamak geometry. Secondly it is presented the MHD equilibrium reconstruction process from external magnetic field and flux measurements using the Function Parametrization FP method. this method. This method is based on the statistical analysis of a database of simulated equilibrium configurations, with the goal of obtaining a simple relationship between the parameters that characterize the equilibrium and the measurements. The results from FP are compared with conventional methods. (author)

Efficient 3D Volume Reconstruction from a Point Cloud Using a Phase-Field Method

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Darae Jeong

2018-01-01

Full Text Available We propose an explicit hybrid numerical method for the efficient 3D volume reconstruction from unorganized point clouds using a phase-field method. The proposed three-dimensional volume reconstruction algorithm is based on the 3D binary image segmentation method. First, we define a narrow band domain embedding the unorganized point cloud and an edge indicating function. Second, we define a good initial phase-field function which speeds up the computation significantly. Third, we use a recently developed explicit hybrid numerical method for solving the three-dimensional image segmentation model to obtain efficient volume reconstruction from point cloud data. In order to demonstrate the practical applicability of the proposed method, we perform various numerical experiments.

Comparing 3-dimensional virtual methods for reconstruction in craniomaxillofacial surgery.

Science.gov (United States)

Benazzi, Stefano; Senck, Sascha

2011-04-01

In the present project, the virtual reconstruction of digital osteomized zygomatic bones was simulated using different methods. A total of 15 skulls were scanned using computed tomography, and a virtual osteotomy of the left zygomatic bone was performed. Next, virtual reconstructions of the missing part using mirror imaging (with and without best fit registration) and thin plate spline interpolation functions were compared with the original left zygomatic bone. In general, reconstructions using thin plate spline warping showed better results than the mirroring approaches. Nevertheless, when dealing with skulls characterized by a low degree of asymmetry, mirror imaging and subsequent registration can be considered a valid and easy solution for zygomatic bone reconstruction. The mirroring tool is one of the possible alternatives in reconstruction, but it might not always be the optimal solution (ie, when the hemifaces are asymmetrical). In the present pilot study, we have verified that best fit registration of the mirrored unaffected hemiface and thin plate spline warping achieved better results in terms of fitting accuracy, overcoming the evident limits of the mirroring approach. Copyright © 2011 American Association of Oral and Maxillofacial Surgeons. Published by Elsevier Inc. All rights reserved.

A Survey on Methods for Reconstructing Surfaces from Unorganized Point Sets

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Vilius Matiukas

2011-08-01

Full Text Available This paper addresses the issue of reconstructing and visualizing surfaces from unorganized point sets. These can be acquired using different techniques, such as 3D-laser scanning, computerized tomography, magnetic resonance imaging and multi-camera imaging. The problem of reconstructing surfaces from their unorganized point sets is common for many diverse areas, including computer graphics, computer vision, computational geometry or reverse engineering. The paper presents three alternative methods that all use variations in complementary cones to triangulate and reconstruct the tested 3D surfaces. The article evaluates and contrasts three alternatives.Article in English

Description of heat flux measurement methods used in hydrocarbon and propellant fuel fires at Sandia.

Energy Technology Data Exchange (ETDEWEB)

Nakos, James Thomas

2010-12-01

The purpose of this report is to describe the methods commonly used to measure heat flux in fire applications at Sandia National Laboratories in both hydrocarbon (JP-8 jet fuel, diesel fuel, etc.) and propellant fires. Because these environments are very severe, many commercially available heat flux gauges do not survive the test, so alternative methods had to be developed. Specially built sensors include 'calorimeters' that use a temperature measurement to infer heat flux by use of a model (heat balance on the sensing surface) or by using an inverse heat conduction method. These specialty-built sensors are made rugged so they will survive the environment, so are not optimally designed for ease of use or accuracy. Other methods include radiometers, co-axial thermocouples, directional flame thermometers (DFTs), Sandia 'heat flux gauges', transpiration radiometers, and transverse Seebeck coefficient heat flux gauges. Typical applications are described and pros and cons of each method are listed.

MO-DE-207A-11: Sparse-View CT Reconstruction Via a Novel Non-Local Means Method

International Nuclear Information System (INIS)

Chen, Z; Qi, H; Wu, S; Xu, Y; Zhou, L

2016-01-01

Purpose: Sparse-view computed tomography (CT) reconstruction is an effective strategy to reduce the radiation dose delivered to patients. Due to its insufficiency of measurements, traditional non-local means (NLM) based reconstruction methods often lead to over-smoothness in image edges. To address this problem, an adaptive NLM reconstruction method based on rotational invariance (RIANLM) is proposed. Methods: The method consists of four steps: 1) Initializing parameters; 2) Algebraic reconstruction technique (ART) reconstruction using raw projection data; 3) Positivity constraint of the image reconstructed by ART; 4) Update reconstructed image by using RIANLM filtering. In RIANLM, a novel similarity metric that is rotational invariance is proposed and used to calculate the distance between two patches. In this way, any patch with similar structure but different orientation to the reference patch would win a relatively large weight to avoid over-smoothed image. Moreover, the parameter h in RIANLM which controls the decay of the weights is adaptive to avoid over-smoothness, while it in NLM is not adaptive during the whole reconstruction process. The proposed method is named as ART-RIANLM and validated on Shepp-Logan phantom and clinical projection data. Results: In our experiments, the searching neighborhood size is set to 15 by 15 and the similarity window is set to 3 by 3. For the simulated case with a resolution of 256 by 256 Shepp-Logan phantom, the ART-RIANLM produces higher SNR (35.38dB<24.00dB) and lower MAE (0.0006<0.0023) reconstructed image than ART-NLM. The visual inspection demonstrated that the proposed method could suppress artifacts or noises more effectively and preserve image edges better. Similar results were found for clinical data case. Conclusion: A novel ART-RIANLM method for sparse-view CT reconstruction is presented with superior image. Compared to the conventional ART-NLM method, the SNR and MAE from ART-RIANLM increases 47% and decreases 74

Software applications for flux balance analysis.

Science.gov (United States)

Lakshmanan, Meiyappan; Koh, Geoffrey; Chung, Bevan K S; Lee, Dong-Yup

2014-01-01

Flux balance analysis (FBA) is a widely used computational method for characterizing and engineering intrinsic cellular metabolism. The increasing number of its successful applications and growing popularity are possibly attributable to the availability of specific software tools for FBA. Each tool has its unique features and limitations with respect to operational environment, user-interface and supported analysis algorithms. Presented herein is an in-depth evaluation of currently available FBA applications, focusing mainly on usability, functionality, graphical representation and inter-operability. Overall, most of the applications are able to perform basic features of model creation and FBA simulation. COBRA toolbox, OptFlux and FASIMU are versatile to support advanced in silico algorithms to identify environmental and genetic targets for strain design. SurreyFBA, WEbcoli, Acorn, FAME, GEMSiRV and MetaFluxNet are the distinct tools which provide the user friendly interfaces in model handling. In terms of software architecture, FBA-SimVis and OptFlux have the flexible environments as they enable the plug-in/add-on feature to aid prospective functional extensions. Notably, an increasing trend towards the implementation of more tailored e-services such as central model repository and assistance to collaborative efforts was observed among the web-based applications with the help of advanced web-technologies. Furthermore, most recent applications such as the Model SEED, FAME, MetaFlux and MicrobesFlux have even included several routines to facilitate the reconstruction of genome-scale metabolic models. Finally, a brief discussion on the future directions of FBA applications was made for the benefit of potential tool developers.

Least Square NUFFT Methods Applied to 2D and 3D Radially Encoded MR Image Reconstruction

Science.gov (United States)

Song, Jiayu; Liu, Qing H.; Gewalt, Sally L.; Cofer, Gary; Johnson, G. Allan

2009-01-01

Radially encoded MR imaging (MRI) has gained increasing attention in applications such as hyperpolarized gas imaging, contrast-enhanced MR angiography, and dynamic imaging, due to its motion insensitivity and improved artifact properties. However, since the technique collects k-space samples nonuniformly, multidimensional (especially 3D) radially sampled MRI image reconstruction is challenging. The balance between reconstruction accuracy and speed becomes critical when a large data set is processed. Kaiser-Bessel gridding reconstruction has been widely used for non-Cartesian reconstruction. The objective of this work is to provide an alternative reconstruction option in high dimensions with on-the-fly kernels calculation. The work develops general multi-dimensional least square nonuniform fast Fourier transform (LS-NUFFT) algorithms and incorporates them into a k-space simulation and image reconstruction framework. The method is then applied to reconstruct the radially encoded k-space, although the method addresses general nonuniformity and is applicable to any non-Cartesian patterns. Performance assessments are made by comparing the LS-NUFFT based method with the conventional Kaiser-Bessel gridding method for 2D and 3D radially encoded computer simulated phantoms and physically scanned phantoms. The results show that the LS-NUFFT reconstruction method has better accuracy-speed efficiency than the Kaiser-Bessel gridding method when the kernel weights are calculated on the fly. The accuracy of the LS-NUFFT method depends on the choice of scaling factor, and it is found that for a particular conventional kernel function, using its corresponding deapodization function as scaling factor and utilizing it into the LS-NUFFT framework has the potential to improve accuracy. When a cosine scaling factor is used, in particular, the LS-NUFFT method is faster than Kaiser-Bessel gridding method because of a quasi closed-form solution. The method is successfully applied to 2D and

A singular-value method for reconstruction of nonradial and lossy objects.

Science.gov (United States)

Jiang, Wei; Astheimer, Jeffrey; Waag, Robert

2012-03-01

Efficient inverse scattering algorithms for nonradial lossy objects are presented using singular-value decomposition to form reduced-rank representations of the scattering operator. These algorithms extend eigenfunction methods that are not applicable to nonradial lossy scattering objects because the scattering operators for these objects do not have orthonormal eigenfunction decompositions. A method of local reconstruction by segregation of scattering contributions from different local regions is also presented. Scattering from each region is isolated by forming a reduced-rank representation of the scattering operator that has domain and range spaces comprised of far-field patterns with retransmitted fields that focus on the local region. Methods for the estimation of the boundary, average sound speed, and average attenuation slope of the scattering object are also given. These methods yielded approximations of scattering objects that were sufficiently accurate to allow residual variations to be reconstructed in a single iteration. Calculated scattering from a lossy elliptical object with a random background, internal features, and white noise is used to evaluate the proposed methods. Local reconstruction yielded images with spatial resolution that is finer than a half wavelength of the center frequency and reproduces sound speed and attenuation slope with relative root-mean-square errors of 1.09% and 11.45%, respectively.

Iterative reconstruction methods for Thermo-acoustic Tomography

International Nuclear Information System (INIS)

Marinesque, Sebastien

2012-01-01

We define, study and implement various iterative reconstruction methods for Thermo-acoustic Tomography (TAT): the Back and Forth Nudging (BFN), easy to implement and to use, a variational technique (VT) and the Back and Forth SEEK (BF-SEEK), more sophisticated, and a coupling method between Kalman filter (KF) and Time Reversal (TR). A unified formulation is explained for the sequential techniques aforementioned that defines a new class of inverse problem methods: the Back and Forth Filters (BFF). In addition to existence and uniqueness (particularly for backward solutions), we study many frameworks that ensure and characterize the convergence of the algorithms. Thus we give a general theoretical framework for which the BFN is a well-posed problem. Then, in application to TAT, existence and uniqueness of its solutions and geometrical convergence of the algorithm are proved, and an explicit convergence rate and a description of its numerical behaviour are given. Next, theoretical and numerical studies of more general and realistic framework are led, namely different objects, speeds (with or without trapping), various sensor configurations and samplings, attenuated equations or external sources. Then optimal control and best estimate tools are used to characterize the BFN convergence and converging feedbacks for BFF, under observability assumptions. Finally, we compare the most flexible and efficient current techniques (TR and an iterative variant) with our various BFF and the VT in several experiments. Thus, robust, with different possible complexities and flexible, the methods that we propose are very interesting reconstruction techniques, particularly in TAT and when observations are degraded. (author) [fr

Accident or homicide--virtual crime scene reconstruction using 3D methods.

Science.gov (United States)

Buck, Ursula; Naether, Silvio; Räss, Beat; Jackowski, Christian; Thali, Michael J

2013-02-10

The analysis and reconstruction of forensically relevant events, such as traffic accidents, criminal assaults and homicides are based on external and internal morphological findings of the injured or deceased person. For this approach high-tech methods are gaining increasing importance in forensic investigations. The non-contact optical 3D digitising system GOM ATOS is applied as a suitable tool for whole body surface and wound documentation and analysis in order to identify injury-causing instruments and to reconstruct the course of event. In addition to the surface documentation, cross-sectional imaging methods deliver medical internal findings of the body. These 3D data are fused into a whole body model of the deceased. Additional to the findings of the bodies, the injury inflicting instruments and incident scene is documented in 3D. The 3D data of the incident scene, generated by 3D laser scanning and photogrammetry, is also included into the reconstruction. Two cases illustrate the methods. In the fist case a man was shot in his bedroom and the main question was, if the offender shot the man intentionally or accidentally, as he declared. In the second case a woman was hit by a car, driving backwards into a garage. It was unclear if the driver drove backwards once or twice, which would indicate that he willingly injured and killed the woman. With this work, we demonstrate how 3D documentation, data merging and animation enable to answer reconstructive questions regarding the dynamic development of patterned injuries, and how this leads to a real data based reconstruction of the course of event. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

Algebraic reconstruction techniques for spectral reconstruction in diffuse optical tomography

International Nuclear Information System (INIS)

Brendel, Bernhard; Ziegler, Ronny; Nielsen, Tim

2008-01-01

Reconstruction in diffuse optical tomography (DOT) necessitates solving the diffusion equation, which is nonlinear with respect to the parameters that have to be reconstructed. Currently applied solving methods are based on the linearization of the equation. For spectral three-dimensional reconstruction, the emerging equation system is too large for direct inversion, but the application of iterative methods is feasible. Computational effort and speed of convergence of these iterative methods are crucial since they determine the computation time of the reconstruction. In this paper, the iterative methods algebraic reconstruction technique (ART) and conjugated gradients (CGs) as well as a new modified ART method are investigated for spectral DOT reconstruction. The aim of the modified ART scheme is to speed up the convergence by considering the specific conditions of spectral reconstruction. As a result, it converges much faster to favorable results than conventional ART and CG methods

Pellet by pellet neutron flux calculations coupled with nodal expansion method

International Nuclear Information System (INIS)

Aldo, Dall'Osso

2003-01-01

We present a technique whose aim is to replace 2-dimensional pin by pin de-homogenization, currently done in core reactor calculations with the nodal expansion method (NEM), by a 3-dimensional finite difference diffusion calculation. This fine calculation is performed as a zoom in each node taking as boundary conditions the results of the NEM calculations. The size of fine mesh is of the order of a fuel pellet. The coupling between fine and NEM calculations is realised by an albedo like boundary condition. Some examples are presented showing fine neutron flux shape near control rods or assembly grids. Other fine flux behaviour as the thermal flux rise in the fuel near the reflector is emphasised. In general the results show the interest of the method in conditions where the separability of radial and axial directions is not granted. (author)

Radiation dose reduction in medical x-ray CT via Fourier-based iterative reconstruction

International Nuclear Information System (INIS)

Fahimian, Benjamin P.; Zhao Yunzhe; Huang Zhifeng; Fung, Russell; Zhu Chun; Miao Jianwei; Mao Yu; Khatonabadi, Maryam; DeMarco, John J.; McNitt-Gray, Michael F.; Osher, Stanley J.

2013-01-01

scanner flux setting of 39 mAs produce comparable image quality, resolution, and contrast relative to FBP with the 140 mAs flux setting. Compared to the algebraic reconstruction technique and the expectation maximization statistical reconstruction algorithm, a significant reduction in computation time is achieved with EST. Finally, numerical experiments on helical cone-beam CT data suggest that the combination of EST and ASSR produces reconstructions with higher image quality and lower noise than the Feldkamp Davis and Kress (FDK) method and the conventional ASSR approach. Conclusions: A Fourier-based iterative method has been applied to the reconstruction of fan-bean CT data with reduced x-ray fluence. This method incorporates advantageous features in both real and Fourier space iterative schemes: using a fast and algebraically exact method to calculate forward projection, enforcing the measured data in Fourier space, and applying physical constraints and flexible regularization in real space. Our results suggest that EST can be utilized for radiation dose reduction in x-ray CT via the readily implementable technique of lowering mAs settings. Numerical experiments further indicate that EST requires less computation time than several other iterative algorithms and can, in principle, be extended to helical cone-beam geometry in combination with the ASSR method.

Flux schemes based finite volume method for internal transonic flow with condensation

Czech Academy of Sciences Publication Activity Database

Halama, Jan; Benkhaldoun, F.; Fořt, J.

2011-01-01

Roč. 65, č. 8 (2011), s. 953-968 ISSN 0271-2091 Institutional research plan: CEZ:AV0Z20760514 Keywords : VFFC flux * SRNH flux * two-phase homogeneous flow * fractional step method * condensation Subject RIV: BK - Fluid Dynamics Impact factor: 1.176, year: 2011

Method of reconstructing a moving pulse

Energy Technology Data Exchange (ETDEWEB)

Howard, S J; Horton, R D; Hwang, D Q; Evans, R W; Brockington, S J; Johnson, J [UC Davis Department of Applied Science, Livermore, CA, 94551 (United States)

2007-11-15

We present a method of analyzing a set of N time signals f{sub i}(t) that consist of local measurements of the same physical observable taken at N sequential locations Z{sub i} along the length of an experimental device. The result is an algorithm for reconstructing an approximation F(z,t) of the field f(z,t) in the inaccessible regions between the points of measurement. We also explore the conditions needed for this approximation to hold, and test the algorithm under a variety of conditions. We apply this method to analyze the magnetic field measurements taken on the Compact Toroid Injection eXperiment (CTIX) plasma accelerator; providing a direct means of visualizing experimental data, quantifying global properties, and benchmarking simulation.

Gas-Kinetic Theory Based Flux Splitting Method for Ideal Magnetohydrodynamics

Science.gov (United States)

Xu, Kun

1998-01-01

A gas-kinetic solver is developed for the ideal magnetohydrodynamics (MHD) equations. The new scheme is based on the direct splitting of the flux function of the MHD equations with the inclusion of "particle" collisions in the transport process. Consequently, the artificial dissipation in the new scheme is much reduced in comparison with the MHD Flux Vector Splitting Scheme. At the same time, the new scheme is compared with the well-developed Roe-type MHD solver. It is concluded that the kinetic MHD scheme is more robust and efficient than the Roe- type method, and the accuracy is competitive. In this paper the general principle of splitting the macroscopic flux function based on the gas-kinetic theory is presented. The flux construction strategy may shed some light on the possible modification of AUSM- and CUSP-type schemes for the compressible Euler equations, as well as to the development of new schemes for a non-strictly hyperbolic system.

Comparison of sap flux, moisture flux tower and MODIS enhanced vegetation index methods for estimating riparian evapotranspiration

Science.gov (United States)

Nagler, Pamela L.; Glenn, Edward P.; Morino, Kiyomi; Neale, Christopher M.U; Cosh, Michael H.

2010-01-01

Riparian evapotranspiration (ET) was measured on a salt cedar (Tamarix spp.) dominated river terrace on the Lower Colorado River from 2007 to 2009 using tissue-heat-balance sap flux sensors at six sites representing very dense, medium dense, and sparse stands of plants. Salt cedar ET varied markedly across sites, and sap flux sensors showed that plants were subject to various degrees of stress, detected as mid-day depression of transpiration and stomatal conductance. Sap flux results were scaled from the leaf level of measurement to the stand level by measuring plant-specific leaf area index and fractional ground cover at each site. Results were compared to Bowen ratio moisture tower data available for three of the sites. Sap flux sensors and flux tower results ranked the sites the same and had similar estimates of ET. A regression equation, relating measured ET of salt cedar and other riparian plants and crops on the Lower Colorado River to the Enhanced Vegetation Index from the MODIS sensor on the Terra satellite and reference crop ET measured at meteorological stations, was able to predict actual ET with an accuracy or uncertainty of about 20%, despite between-site differences for salt cedar. Peak summer salt cedar ET averaged about 6 mm d-1 across sites and methods of measurement.

Anatomic and histological characteristics of vagina reconstructed by McIndoe method

Directory of Open Access Journals (Sweden)

Kozarski Jefta

2009-01-01

Full Text Available Background/Aim. Congenital absence of vagina is known from ancient times of Greek. According to the literature data, incidence is 1/4 000 to 1/20 000. Treatment of this anomaly includes non-operative and operative procedures. McIndoe procedure uses split skin graft by Thiersch. The aim of this study was to establish anatomic and histological characteristics of vagina reconstructed by McIndoe method in Mayer Küster-Rockitansky Hauser (MKRH syndrome and compare them with normal vagina. Methods. The study included 21 patients of 18 and more years with congenital anomaly known as aplasio vaginae within the Mayer Küster-Rockitansky Hauser syndrome. The patients were operated on by the plastic surgeon using the McIndoe method. The study was a retrospective review of the data from the history of the disease, objective and gynecological examination and cytological analysis of native preparations of vaginal stain (Papanicolau. Comparatively, 21 females of 18 and more years with normal vaginas were also studied. All the subjects were divided into the groups R (reconstructed and C (control and the subgroups according to age up to 30 years (1 R, 1C, from 30 to 50 (2R, 2C, and over 50 (3R, 3C. Statistical data processing was performed by using the Student's t-test and Mann-Writney U-test. A value of p < 0.05 was considered statistically significant. Results. The results show that there are differences in the depth and the wideness of reconstructed vagina, but the obtained values are still in the range of normal ones. Cytological differences between a reconstructed and the normal vagina were found. Conclusion. A reconstructed vagina is smaller than the normal one regarding depth and width, but within the range of normal values. A split skin graft used in the reconstruction, keeps its own cytological, i.e. histological and, so, biological characteristics.

Linearized image reconstruction method for ultrasound modulated electrical impedance tomography based on power density distribution

International Nuclear Information System (INIS)

Song, Xizi; Xu, Yanbin; Dong, Feng

2017-01-01

Electrical resistance tomography (ERT) is a promising measurement technique with important industrial and clinical applications. However, with limited effective measurements, it suffers from poor spatial resolution due to the ill-posedness of the inverse problem. Recently, there has been an increasing research interest in hybrid imaging techniques, utilizing couplings of physical modalities, because these techniques obtain much more effective measurement information and promise high resolution. Ultrasound modulated electrical impedance tomography (UMEIT) is one of the newly developed hybrid imaging techniques, which combines electric and acoustic modalities. A linearized image reconstruction method based on power density is proposed for UMEIT. The interior data, power density distribution, is adopted to reconstruct the conductivity distribution with the proposed image reconstruction method. At the same time, relating the power density change to the change in conductivity, the Jacobian matrix is employed to make the nonlinear problem into a linear one. The analytic formulation of this Jacobian matrix is derived and its effectiveness is also verified. In addition, different excitation patterns are tested and analyzed, and opposite excitation provides the best performance with the proposed method. Also, multiple power density distributions are combined to implement image reconstruction. Finally, image reconstruction is implemented with the linear back-projection (LBP) algorithm. Compared with ERT, with the proposed image reconstruction method, UMEIT can produce reconstructed images with higher quality and better quantitative evaluation results. (paper)

A new diffusion nodal method based on analytic basis function expansion

International Nuclear Information System (INIS)

Noh, J.M.; Cho, N.Z.

1993-01-01

The transverse integration procedure commonly used in most advanced nodal methods results in some limitations. The first is that the transverse leakage term that appears in the transverse integration procedure must be appropriately approximated. In most advanced nodal methods, this term is expanded in a quadratic polynomial. The second arises when reconstructing the pinwise flux distribution within a node. The available one-dimensional flux shapes from nodal calculation in each spatial direction cannot be used directly in the flux reconstruction. Finally, the transverse leakage defined for a hexagonal node becomes so complicated as not to be easily handled and contains nonphysical singular terms. In this paper, a new nodal method called the analytic function expansion nodal (AFEN) method is described for both the rectangular geometry and the hexagonal geometry in order to overcome these limitations. This method does not solve the transverse-integrated one-dimensional diffusion equations but instead solves directly the original multidimensional diffusion equation within a node. This is a accomplished by expanding the solution (or the intranodal homogeneous flux distribution) in terms of nonseparable analytic basis functions satisfying the diffusion equation at any point in the node

A Robust Shape Reconstruction Method for Facial Feature Point Detection

Directory of Open Access Journals (Sweden)

Shuqiu Tan

2017-01-01

Full Text Available Facial feature point detection has been receiving great research advances in recent years. Numerous methods have been developed and applied in practical face analysis systems. However, it is still a quite challenging task because of the large variability in expression and gestures and the existence of occlusions in real-world photo shoot. In this paper, we present a robust sparse reconstruction method for the face alignment problems. Instead of a direct regression between the feature space and the shape space, the concept of shape increment reconstruction is introduced. Moreover, a set of coupled overcomplete dictionaries termed the shape increment dictionary and the local appearance dictionary are learned in a regressive manner to select robust features and fit shape increments. Additionally, to make the learned model more generalized, we select the best matched parameter set through extensive validation tests. Experimental results on three public datasets demonstrate that the proposed method achieves a better robustness over the state-of-the-art methods.

Analysis of the neutron flux in an annular pulsed reactor by using finite volume method

Energy Technology Data Exchange (ETDEWEB)

Silva, Mário A.B. da; Narain, Rajendra; Bezerra, Jair de L., E-mail: mabs500@gmail.com, E-mail: narain@ufpe.br, E-mail: jairbezerra@gmail.com [Universidade Federal de Pernambuco (UFPE), Recife, PE (Brazil). Centro de Tecnologia e Geociências. Departamento de Energia Nuclear

2017-07-01

Production of very intense neutron sources is important for basic nuclear physics and for material testing and isotope production. Nuclear reactors have been used as sources of intense neutron fluxes, although the achievement of such levels is limited by the inability to remove fission heat. Periodic pulsed reactors provide very intense fluxes by a rotating modulator near a subcritical core. A concept for the production of very intense neutron fluxes that combines features of periodic pulsed reactors and steady state reactors was proposed by Narain (1997). Such a concept is known as Very Intense Continuous High Flux Pulsed Reactor (VICHFPR) and was analyzed by using diffusion equation with moving boundary conditions and Finite Difference Method with Crank-Nicolson formalism. This research aims to analyze the flux distribution in the Very Intense Continuous Flux High Pulsed Reactor (VICHFPR) by using the Finite Volume Method and compares its results with those obtained by the previous computational method. (author)

Analysis of the neutron flux in an annular pulsed reactor by using finite volume method

International Nuclear Information System (INIS)

Silva, Mário A.B. da; Narain, Rajendra; Bezerra, Jair de L.

2017-01-01

Production of very intense neutron sources is important for basic nuclear physics and for material testing and isotope production. Nuclear reactors have been used as sources of intense neutron fluxes, although the achievement of such levels is limited by the inability to remove fission heat. Periodic pulsed reactors provide very intense fluxes by a rotating modulator near a subcritical core. A concept for the production of very intense neutron fluxes that combines features of periodic pulsed reactors and steady state reactors was proposed by Narain (1997). Such a concept is known as Very Intense Continuous High Flux Pulsed Reactor (VICHFPR) and was analyzed by using diffusion equation with moving boundary conditions and Finite Difference Method with Crank-Nicolson formalism. This research aims to analyze the flux distribution in the Very Intense Continuous Flux High Pulsed Reactor (VICHFPR) by using the Finite Volume Method and compares its results with those obtained by the previous computational method. (author)

Radiation dose reduction in medical x-ray CT via Fourier-based iterative reconstruction.

Science.gov (United States)

Fahimian, Benjamin P; Zhao, Yunzhe; Huang, Zhifeng; Fung, Russell; Mao, Yu; Zhu, Chun; Khatonabadi, Maryam; DeMarco, John J; Osher, Stanley J; McNitt-Gray, Michael F; Miao, Jianwei

2013-03-01

A Fourier-based iterative reconstruction technique, termed Equally Sloped Tomography (EST), is developed in conjunction with advanced mathematical regularization to investigate radiation dose reduction in x-ray CT. The method is experimentally implemented on fan-beam CT and evaluated as a function of imaging dose on a series of image quality phantoms and anonymous pediatric patient data sets. Numerical simulation experiments are also performed to explore the extension of EST to helical cone-beam geometry. EST is a Fourier based iterative algorithm, which iterates back and forth between real and Fourier space utilizing the algebraically exact pseudopolar fast Fourier transform (PPFFT). In each iteration, physical constraints and mathematical regularization are applied in real space, while the measured data are enforced in Fourier space. The algorithm is automatically terminated when a proposed termination criterion is met. Experimentally, fan-beam projections were acquired by the Siemens z-flying focal spot technology, and subsequently interleaved and rebinned to a pseudopolar grid. Image quality phantoms were scanned at systematically varied mAs settings, reconstructed by EST and conventional reconstruction methods such as filtered back projection (FBP), and quantified using metrics including resolution, signal-to-noise ratios (SNRs), and contrast-to-noise ratios (CNRs). Pediatric data sets were reconstructed at their original acquisition settings and additionally simulated to lower dose settings for comparison and evaluation of the potential for radiation dose reduction. Numerical experiments were conducted to quantify EST and other iterative methods in terms of image quality and computation time. The extension of EST to helical cone-beam CT was implemented by using the advanced single-slice rebinning (ASSR) method. Based on the phantom and pediatric patient fan-beam CT data, it is demonstrated that EST reconstructions with the lowest scanner flux setting of 39 m

Edge plasma density reconstruction for fast monoenergetic lithium beam probing

International Nuclear Information System (INIS)

Sasaki, S.; Takamura, S.; Ueda, M.; Iguchi, H.; Fujita, J.; Kadota, K.

1993-01-01

Two different electron density reconstruction methods for 8-keV neutral lithium beam probing have been developed for the Compact Helical System (CHS). Density dependences on emission and ionization processes are included by using effective rate coefficients obtained from the collisional radiative model. Since the two methods differ in the way the local beam density in the plasma is determined, the methods have different applicable electron densities. The beam attenuation is calculated by iteration from the electron density profile in method I. In method II, the beam remainder at the observation point z is determined by integrating the Li I emission intensity from z toward the position of emission tail-off. At the emission tail-off, the fast lithium beam is completely attenuated. Selecting an appropriate method enables us to obtain edge electron density profile well inside the last closed flux surface for various ranges of plasma densities (10 12 --5x10 13 cm -3 ). The electron density profiles reconstructed by these two different methods are in good agreement with each other and are consistent with results from ruby laser Thomson scattering

Passive electromagnetic NDE for mechanical damage inspection by detecting leakage magnetic flux. (I. Reconstruction of magnetic charges from detected field signals)

International Nuclear Information System (INIS)

Chen, Zhenmao; Aoto, Kazumi; Kato, Syoichi

1999-07-01

In this report, reconstruction of magnetic charges induced by mechanical damages in a test piece of SUS304 stainless steel is performed as a part of efforts to establish a passive nondestructive testing method on the basis of the inspection of leakage magnetic field. The approach for solving this typical ill-posed inverse problem is selected as a way in the least square method category. Concerning the ill-poseness of the system of equations, an iteration algorithm is adopted to its solving in which the designations of initial profile, the weight coefficients and the total number of iterations are taken as means of regularization. From examples using simulated input data, it is verified that the approach gives good reconstruction results in case of signals with a relative high S/N ratio. For improving the robustness of the proposed method, a Galerkin procedure with base functions chosen as the Daubechies' wavelet is also introduced for discretizing the governing equation. By comparing the reconstruction results of the least square method and those using wavelet discretization, it is found that the wavelet used approach is more feasible in the inversion of noise polluted signals. Reconstruction of 1-D and 2-D magnetic charges with the least square strategy and reconstruction of an 1-D problem with the wavelet used method are carried out from both simulated and measured magnetic field signals which are used as the validation of the proposed inversion strategy. (author)

Determining Accuracy of Thermal Dissipation Methods-based Sap Flux in Japanese Cedar Trees

Science.gov (United States)

Su, Man-Ping; Shinohara, Yoshinori; Laplace, Sophie; Lin, Song-Jin; Kume, Tomonori

2017-04-01

Thermal dissipation method, one kind of sap flux measurement method that can estimate individual tree transpiration, have been widely used because of its low cost and uncomplicated operation. Although thermal dissipation method is widespread, the accuracy of this method is doubted recently because some tree species materials in previous studies were not suitable for its empirical formula from Granier due to difference of wood characteristics. In Taiwan, Cryptomeria japonica (Japanese cedar) is one of the dominant species in mountainous area, quantifying the transpiration of Japanese cedar trees is indispensable to understand water cycling there. However, no one have tested the accuracy of thermal dissipation methods-based sap flux for Japanese cedar trees in Taiwan. Thus, in this study we conducted calibration experiment using twelve Japanese cedar stem segments from six trees to investigate the accuracy of thermal dissipation methods-based sap flux in Japanese cedar trees in Taiwan. By pumping water from segment bottom to top and inserting probes into segments to collect data simultaneously, we compared sap flux densities calculated from real water uptakes (Fd_actual) and empirical formula (Fd_Granier). Exact sapwood area and sapwood depth of each sample were obtained from dying segment with safranin stain solution. Our results showed that Fd_Granier underestimated 39 % of Fd_actual across sap flux densities ranging from 10 to 150 (cm3m-2s-1); while applying sapwood depth corrected formula from Clearwater, Fd_Granier became accurately that only underestimated 0.01 % of Fd_actual. However, when sap flux densities ranging from 10 to 50 (cm3m-2s-1)which is similar with the field data of Japanese cedar trees in a mountainous area of Taiwan, Fd_Granier underestimated 51 % of Fd_actual, and underestimated 26 % with applying Clearwater sapwood depth corrected formula. These results suggested sapwood depth significantly impacted on the accuracy of thermal dissipation

Influence of image reconstruction methods on statistical parametric mapping of brain PET images

International Nuclear Information System (INIS)

Yin Dayi; Chen Yingmao; Yao Shulin; Shao Mingzhe; Yin Ling; Tian Jiahe; Cui Hongyan

2007-01-01

Objective: Statistic parametric mapping (SPM) was widely recognized as an useful tool in brain function study. The aim of this study was to investigate if imaging reconstruction algorithm of PET images could influence SPM of brain. Methods: PET imaging of whole brain was performed in six normal volunteers. Each volunteer had two scans with true and false acupuncturing. The PET scans were reconstructed using ordered subsets expectation maximization (OSEM) and filtered back projection (FBP) with 3 varied parameters respectively. The images were realigned, normalized and smoothed using SPM program. The difference between true and false acupuncture scans was tested using a matched pair t test at every voxel. Results: (1) SPM corrected multiple comparison (P corrected uncorrected <0.001): SPM derived from the images with different reconstruction method were different. The largest difference, in number and position of the activated voxels, was noticed between FBP and OSEM re- construction algorithm. Conclusions: The method of PET image reconstruction could influence the results of SPM uncorrected multiple comparison. Attention should be paid when the conclusion was drawn using SPM uncorrected multiple comparison. (authors)

Two-dimensional Tissue Image Reconstruction Based on Magnetic Field Data

Directory of Open Access Journals (Sweden)

J. Dedkova

2012-09-01

Full Text Available This paper introduces new possibilities within two-dimensional reconstruction of internal conductivity distribution. In addition to the electric field inside the given object, the injected current causes a magnetic field which can be measured either outside the object by means of a Hall probe or inside the object through magnetic resonance imaging. The Magnetic Resonance method, together with Electrical impedance tomography (MREIT, is well known as a bio-imaging modality providing cross-sectional conductivity images with a good spatial resolution from the measurements of internal magnetic flux density produced by externally injected currents. A new algorithm for the conductivity reconstruction, which utilizes the internal current information with respect to corresponding boundary conditions and the external magnetic field, was developed. A series of computer simulations has been conducted to assess the performance of the proposed algorithm within the process of estimating electrical conductivity changes in the lungs, heart, and brain tissues captured in two-dimensional piecewise homogeneous chest and head models. The reconstructed conductivity distribution using the proposed method is compared with that using a conventional method based on Electrical Impedance Tomography (EIT. The acquired experience is discussed and the direction of further research is proposed.

A method to calculate flux distribution in reactor systems containing materials with grain structure

International Nuclear Information System (INIS)

Stepanek, J.

1980-01-01

A method is proposed to compute the neutron flux spatial distribution in slab, spherical or cylindrical systems containing zones with close grain structure of material. Several different types of equally distributed particles embedded in the matrix material are allowed in one or more zones. The multi-energy group structure of the flux is considered. The collision probability method is used to compute the fluxes in the grains and in an ''effective'' part of the matrix material. Then the overall structure of the flux distribution in the zones with homogenized materials is determined using the DPN ''surface flux'' method. Both computations are connected using the balance equation during the outer iterations. The proposed method is written in the code SURCU-DH. Two testcases are computed and discussed. One testcase is the computation of the eigenvalue in simplified slab geometry of an LWR container of one zone with boral grains equally distributed in an aluminium matrix. The second is the computation of the eigenvalue in spherical geometry of the HTR pebble-bed cell with spherical particles embedded in a graphite matrix. The results are compared to those obtained by repeated use of the WIMS Code. (author)

A two-way regularization method for MEG source reconstruction

KAUST Repository

Tian, Tian Siva; Huang, Jianhua Z.; Shen, Haipeng; Li, Zhimin

2012-01-01

The MEG inverse problem refers to the reconstruction of the neural activity of the brain from magnetoencephalography (MEG) measurements. We propose a two-way regularization (TWR) method to solve the MEG inverse problem under the assumptions that only a small number of locations in space are responsible for the measured signals (focality), and each source time course is smooth in time (smoothness). The focality and smoothness of the reconstructed signals are ensured respectively by imposing a sparsity-inducing penalty and a roughness penalty in the data fitting criterion. A two-stage algorithm is developed for fast computation, where a raw estimate of the source time course is obtained in the first stage and then refined in the second stage by the two-way regularization. The proposed method is shown to be effective on both synthetic and real-world examples. © Institute of Mathematical Statistics, 2012.

A two-way regularization method for MEG source reconstruction

KAUST Repository

Tian, Tian Siva

2012-09-01

The MEG inverse problem refers to the reconstruction of the neural activity of the brain from magnetoencephalography (MEG) measurements. We propose a two-way regularization (TWR) method to solve the MEG inverse problem under the assumptions that only a small number of locations in space are responsible for the measured signals (focality), and each source time course is smooth in time (smoothness). The focality and smoothness of the reconstructed signals are ensured respectively by imposing a sparsity-inducing penalty and a roughness penalty in the data fitting criterion. A two-stage algorithm is developed for fast computation, where a raw estimate of the source time course is obtained in the first stage and then refined in the second stage by the two-way regularization. The proposed method is shown to be effective on both synthetic and real-world examples. © Institute of Mathematical Statistics, 2012.

On the kinematic reconstruction of deep inelastic scattering at HERA: the Σmethod

International Nuclear Information System (INIS)

Bassler, U.; Bernardi, G.

1994-12-01

We review and compare the reconstruction methods of the inclusive deep inelastic scattering variables used at HERA. We introduce a new prescription, the Sigma (Σ) method, which allows to measure the structure function of the proton F 2 (x, Q 2 ) in a large kinematic domain, and in particular in the low x-low Q 2 region, with small systematic errors and small radiative corrections. A detailed comparison between the Σ method and the other methods is shown. Extensions of the Σ method are presented. The effect of QED radiation on the kinematic reconstruction and on the structure function measurement is discussed. (orig.)

Advances on geometric flux optical design method

Science.gov (United States)

García-Botella, Ángel; Fernández-Balbuena, Antonio Álvarez; Vázquez, Daniel

2017-09-01

Nonimaging optics is focused on the study of methods to design concentrators or illuminators systems. It can be included in the area of photometry and radiometry and it is governed by the laws of geometrical optics. The field vector method, which starts with the definition of the irradiance vector E, is one of the techniques used in nonimaging optics. Called "Geometrical flux vector" it has provide ideal designs. The main property of this model is, its ability to estimate how radiant energy is transferred by the optical system, from the concepts of field line, flux tube and pseudopotential surface, overcoming traditional raytrace methods. Nevertheless this model has been developed only at an academic level, where characteristic optical parameters are ideal not real and the studied geometries are simple. The main objective of the present paper is the application of the vector field method to the analysis and design of real concentration and illumination systems. We propose the development of a calculation tool for optical simulations by vector field, using algorithms based on Fermat`s principle, as an alternative to traditional tools for optical simulations by raytrace, based on reflection and refraction law. This new tool provides, first, traditional simulations results: efficiency, illuminance/irradiance calculations, angular distribution of light- with lower computation time, photometrical information needs about a few tens of field lines, in comparison with million rays needed nowadays. On the other hand the tool will provides new information as vector field maps produced by the system, composed by field lines and quasipotential surfaces. We show our first results with the vector field simulation tool.

A Stochastic Geometry Method for Pylon Reconstruction from Airborne LiDAR Data

Directory of Open Access Journals (Sweden)

Bo Guo

2016-03-01

Full Text Available Object detection and reconstruction from remotely sensed data are active research topic in photogrammetric and remote sensing communities. Power engineering device monitoring by detecting key objects is important for power safety. In this paper, we introduce a novel method for the reconstruction of self-supporting pylons widely used in high voltage power-line systems from airborne LiDAR data. Our work constructs pylons from a library of 3D parametric models, which are represented using polyhedrons based on stochastic geometry. Firstly, laser points of pylons are extracted from the dataset using an automatic classification method. An energy function made up of two terms is then defined: the first term measures the adequacy of the objects with respect to the data, and the second term has the ability to favor or penalize certain configurations based on prior knowledge. Finally, estimation is undertaken by minimizing the energy using simulated annealing. We use a Markov Chain Monte Carlo sampler, leading to an optimal configuration of objects. Two main contributions of this paper are: (1 building a framework for automatic pylon reconstruction; and (2 efficient global optimization. The pylons can be precisely reconstructed through energy optimization. Experiments producing convincing results validated the proposed method using a dataset of complex structure.

Estimation of aerosol plutonium transport by the dust-flux method: a perspective on application of detailed data

International Nuclear Information System (INIS)

Shinn, J.H.

1976-01-01

Two methods of dust-flux measurements are discussed which have been utilized to estimate aerosol plutonium deposition and resuspension. In previous studies the methods were found to be sufficiently detailed to permit parameterization of dust-flux to the erodibility of the soil, and a seventh-power dependency of dust-flux (or plutonium flux) to wind speed was observed in worst case conditions. The eddy-correlation method is technically more difficult, requires high-speed data acquisition, and requires an instrument response time better than one second, but the eddy-correlation method has been shown feasible with new fast-response sensors, and it is more useful in limited areas because it can be used as a probe. The flux-gradient method is limited by critical assumptions and is more bulky, but the method is more commonly used and accepted. The best approach is to use both methods simultaneously. It is suggested that several questions should be investigated by the methods, such as saltation stimulation of dust-flux, simultaneous suspension and deposition, foliar deposition and trapping, erodibility of crusted surfaces, and horizontally heterogeneous erodibility

Evaluation of two methods for using MR information in PET reconstruction

International Nuclear Information System (INIS)

Caldeira, L.; Scheins, J.; Almeida, P.; Herzog, H.

2013-01-01

Using magnetic resonance (MR) information in maximum a posteriori (MAP) algorithms for positron emission tomography (PET) image reconstruction has been investigated in the last years. Recently, three methods to introduce this information have been evaluated and the Bowsher prior was considered the best. Its main advantage is that it does not require image segmentation. Another method that has been widely used for incorporating MR information is using boundaries obtained by segmentation. This method has also shown improvements in image quality. In this paper, two methods for incorporating MR information in PET reconstruction are compared. After a Bayes parameter optimization, the reconstructed images were compared using the mean squared error (MSE) and the coefficient of variation (CV). MSE values are 3% lower in Bowsher than using boundaries. CV values are 10% lower in Bowsher than using boundaries. Both methods performed better than using no prior, that is, maximum likelihood expectation maximization (MLEM) or MAP without anatomic information in terms of MSE and CV. Concluding, incorporating MR information using the Bowsher prior gives better results in terms of MSE and CV than boundaries. MAP algorithms showed again to be effective in noise reduction and convergence, specially when MR information is incorporated. The robustness of the priors in respect to noise and inhomogeneities in the MR image has however still to be performed

Direct reconstruction of pharmacokinetic parameters in dynamic fluorescence molecular tomography by the augmented Lagrangian method

Science.gov (United States)

Zhu, Dianwen; Zhang, Wei; Zhao, Yue; Li, Changqing

2016-03-01

Dynamic fluorescence molecular tomography (FMT) has the potential to quantify physiological or biochemical information, known as pharmacokinetic parameters, which are important for cancer detection, drug development and delivery etc. To image those parameters, there are indirect methods, which are easier to implement but tend to provide images with low signal-to-noise ratio, and direct methods, which model all the measurement noises together and are statistically more efficient. The direct reconstruction methods in dynamic FMT have attracted a lot of attention recently. However, the coupling of tomographic image reconstruction and nonlinearity of kinetic parameter estimation due to the compartment modeling has imposed a huge computational burden to the direct reconstruction of the kinetic parameters. In this paper, we propose to take advantage of both the direct and indirect reconstruction ideas through a variable splitting strategy under the augmented Lagrangian framework. Each iteration of the direct reconstruction is split into two steps: the dynamic FMT image reconstruction and the node-wise nonlinear least squares fitting of the pharmacokinetic parameter images. Through numerical simulation studies, we have found that the proposed algorithm can achieve good reconstruction results within a small amount of time. This will be the first step for a combined dynamic PET and FMT imaging in the future.

New method to analyze internal disruptions with tomographic reconstructions

Energy Technology Data Exchange (ETDEWEB)

Tanzi, C.P. [EURATOM-FOM Association, FOM-Instituut voor Plasmafysica Rijnhuizen, P.O. BOX 1207, 3430 BE Nieuwegein (The Netherlands); de Blank, H.J. [Max-Planck-Institut fuer Plasmaphysik, EURATOM-IPP Association, 85740 Garching (Germany)

1997-03-01

Sawtooth crashes have been investigated on the Rijnhuizen Tokamak Project (RTP) [N. J. Lopes Cardozo {ital et al.}, {ital Proceedings of the 14th International Conference on Plasma Physics and Controlled Nuclear Fusion Research}, W{umlt u}rzburg, 1992 (International Atomic Energy Agency, Vienna, 1993), Vol. 1, p. 271]. Internal disruptions in tokamak plasmas often exhibit an m=1 poloidal mode structure prior to the collapse which can be clearly identified by means of multicamera soft x-ray diagnostics. In this paper tomographic reconstructions of such m=1 modes are analyzed with a new method, based on magnetohydrodynamic (MHD) invariants computed from the two-dimensional emissivity profiles, which quantifies the amount of profile flattening not only after the crash but also during the precursor oscillations. The results are interpreted by comparing them with two models which simulate the measurements of the m=1 redistribution of soft x-ray emissivity prior to the sawtooth crash. One model is based on the magnetic reconnection model of Kadomtsev. The other involves ideal MHD motion only. In cases where differences in magnetic topology between the two models cannot be seen in the tomograms, the analysis of profile flattening has an advantage. The analysis shows that in RTP the clearly observed m=1 displacement of some sawteeth requires the presence of convective ideal MHD motion, whereas other precursors are consistent with magnetic reconnection of up to 75{percent} of the magnetic flux within the q=1 surface. The possibility of ideal interchange combined with enhanced cross-field transport is not excluded. {copyright} {ital 1997 American Institute of Physics.}

New method to analyze internal disruptions with tomographic reconstructions

International Nuclear Information System (INIS)

Tanzi, C.P.; de Blank, H.J.

1997-01-01

Sawtooth crashes have been investigated on the Rijnhuizen Tokamak Project (RTP) [N. J. Lopes Cardozo et al., Proceedings of the 14th International Conference on Plasma Physics and Controlled Nuclear Fusion Research, Wuerzburg, 1992 (International Atomic Energy Agency, Vienna, 1993), Vol. 1, p. 271]. Internal disruptions in tokamak plasmas often exhibit an m=1 poloidal mode structure prior to the collapse which can be clearly identified by means of multicamera soft x-ray diagnostics. In this paper tomographic reconstructions of such m=1 modes are analyzed with a new method, based on magnetohydrodynamic (MHD) invariants computed from the two-dimensional emissivity profiles, which quantifies the amount of profile flattening not only after the crash but also during the precursor oscillations. The results are interpreted by comparing them with two models which simulate the measurements of the m=1 redistribution of soft x-ray emissivity prior to the sawtooth crash. One model is based on the magnetic reconnection model of Kadomtsev. The other involves ideal MHD motion only. In cases where differences in magnetic topology between the two models cannot be seen in the tomograms, the analysis of profile flattening has an advantage. The analysis shows that in RTP the clearly observed m=1 displacement of some sawteeth requires the presence of convective ideal MHD motion, whereas other precursors are consistent with magnetic reconnection of up to 75% of the magnetic flux within the q=1 surface. The possibility of ideal interchange combined with enhanced cross-field transport is not excluded. copyright 1997 American Institute of Physics

Sediment core and glacial environment reconstruction - a method review

Science.gov (United States)

Bakke, Jostein; Paasche, Øyvind

2010-05-01

Alpine glaciers are often located in remote and high-altitude regions of the world, areas that only rarely are covered by instrumental records. Reconstructions of glaciers has therefore proven useful for understanding past climate dynamics on both shorter and longer time-scales. One major drawback with glacier reconstructions based solely on moraine chronologies - by far the most common -, is that due to selective preservation of moraine ridges such records do not exclude the possibility of multiple Holocene glacier advances. This problem is true regardless whether cosmogenic isotopes or lichenometry have been used to date the moraines, or also radiocarbon dating of mega-fossils buried in till or underneath the moraines themselves. To overcome this problem Karlén (1976) initially suggested that glacial erosion and the associated production of rock-flour deposited in downstream lakes could provide a continuous record of glacial fluctuations, hence overcoming the problem of incomplete reconstructions. We want to discuss the methods used to reconstruct past glacier activity based on sediments deposited in distal glacier-fed lakes. By quantifying physical properties of glacial and extra-glacial sediments deposited in catchments, and in downstream lakes and fjords, it is possible to isolate and identify past glacier activity - size and production rate - that subsequently can be used to reconstruct changing environmental shifts and trends. Changes in average sediment evacuation from alpine glaciers are mainly governed by glacier size and the mass turnover gradient, determining the deformation rate at any given time. The amount of solid precipitation (mainly winter accumulation) versus loss due to melting during the ablation-season (mainly summer temperature) determines the mass turnover gradient in either positive or negative direction. A prevailing positive net balance will lead to higher sedimentation rates and vice versa, which in turn can be recorded in downstream

A Family of Multipoint Flux Mixed Finite Element Methods for Elliptic Problems on General Grids

KAUST Repository

Wheeler, Mary F.; Xue, Guangri; Yotov, Ivan

2011-01-01

In this paper, we discuss a family of multipoint flux mixed finite element (MFMFE) methods on simplicial, quadrilateral, hexahedral, and triangular-prismatic grids. The MFMFE methods are locally conservative with continuous normal fluxes, since

A new method of morphological comparison for bony reconstructive surgery: maxillary reconstruction using scapular tip bone

Science.gov (United States)

Chan, Harley; Gilbert, Ralph W.; Pagedar, Nitin A.; Daly, Michael J.; Irish, Jonathan C.; Siewerdsen, Jeffrey H.

2010-02-01

esthetic appearance is one of the most important factors for reconstructive surgery. The current practice of maxillary reconstruction chooses radial forearm, fibula or iliac rest osteocutaneous to recreate three-dimensional complex structures of the palate and maxilla. However, these bone flaps lack shape similarity to the palate and result in a less satisfactory esthetic. Considering similarity factors and vasculature advantages, reconstructive surgeons recently explored the use of scapular tip myo-osseous free flaps to restore the excised site. We have developed a new method that quantitatively evaluates the morphological similarity of the scapula tip bone and palate based on a diagnostic volumetric computed tomography (CT) image. This quantitative result was further interpreted as a color map that rendered on the surface of a three-dimensional computer model. For surgical planning, this color interpretation could potentially assist the surgeon to maximize the orientation of the bone flaps for best fit of the reconstruction site. With approval from the Research Ethics Board (REB) of the University Health Network, we conducted a retrospective analysis with CT image obtained from 10 patients. Each patient had a CT scans including the maxilla and chest on the same day. Based on this image set, we simulated total, subtotal and hemi palate reconstruction. The procedure of simulation included volume segmentation, conversing the segmented volume to a stereo lithography (STL) model, manual registration, computation of minimum geometric distances and curvature between STL model. Across the 10 patients data, we found the overall root-mean-square (RMS) conformance was 3.71+/- 0.16 mm

Phase derivative method for reconstruction of slightly off-axis digital holograms.

Science.gov (United States)

Guo, Cheng-Shan; Wang, Ben-Yi; Sha, Bei; Lu, Yu-Jie; Xu, Ming-Yuan

2014-12-15

A phase derivative (PD) method is proposed for reconstruction of off-axis holograms. In this method, a phase distribution of the tested object wave constrained within 0 to pi radian is firstly worked out by a simple analytical formula; then it is corrected to its right range from -pi to pi according to the sign characteristics of its first-order derivative. A theoretical analysis indicates that this PD method is particularly suitable for reconstruction of slightly off-axis holograms because it only requires the spatial frequency of the reference beam larger than spatial frequency of the tested object wave in principle. In addition, because the PD method belongs to a pure local method with no need of any integral operation or phase shifting algorithm in process of the phase retrieval, it could have some advantages in reducing computer load and memory requirements to the image processing system. Some experimental results are given to demonstrate the feasibility of the method.

Measurement of Critical Heat Flux Using the Transient Inverse Heat Conduction Method in Spray cooling

Energy Technology Data Exchange (ETDEWEB)

Kim, Yeung Chan [Andong Nat’l Univ., Andong (Korea, Republic of)

2016-10-15

A study on the measurement of critical heat flux using the transient inverse heat conduction method in spray cooling was performed. The inverse heat conduction method estimates the surface heat flux or temperature using a measured interior temperature history. The effects of the measuring time interval and location of temperature measurement on the measurement of critical heat flux were primarily investigated. The following results were obtained. The estimated critical heat flux decreased as the time interval of temperature measurement increased. Meanwhile, the effect of measurement location on critical heat flux was not significant. It was also found, from the experimental results, that the critical superheat increased as the measurement location of thermocouple neared the heat transfer surface.

Measurement of Critical Heat Flux Using the Transient Inverse Heat Conduction Method in Spray cooling

International Nuclear Information System (INIS)

Kim, Yeung Chan

2016-01-01

A study on the measurement of critical heat flux using the transient inverse heat conduction method in spray cooling was performed. The inverse heat conduction method estimates the surface heat flux or temperature using a measured interior temperature history. The effects of the measuring time interval and location of temperature measurement on the measurement of critical heat flux were primarily investigated. The following results were obtained. The estimated critical heat flux decreased as the time interval of temperature measurement increased. Meanwhile, the effect of measurement location on critical heat flux was not significant. It was also found, from the experimental results, that the critical superheat increased as the measurement location of thermocouple neared the heat transfer surface.

METHOD OF DETERMINING ECONOMICAL EFFICIENCY OF HOUSING STOCK RECONSTRUCTION IN A CITY

Directory of Open Access Journals (Sweden)

Petreneva Ol’ga Vladimirovna

2016-03-01

Full Text Available RECONSTRUCTION IN A CITY The demand in comfortable housing has always been very high. The building density is not the same in different regions and sometimes there is no land for new housing construction, especially in the central regions of cities. Moreover, in many cities cultural and historical centers remain, which create the historical appearance of the city, that’s why new construction is impossible in these regions. Though taking into account the depreciation and obsolescence, the operation life of many buildings come to an end, they fall into disrepair. In these cases there arises a question on the reconstruction of the existing residential, public and industrial buildings. The aim of the reconstruction is bringing the existing worn-out building stock into correspondence with technical, social and sanitary requirements and living standards and conditions. The authors consider the currency and reasons for reconstruction of residential buildings. They attempt to answer the question, what is more economical efficient: new construction or reconstruction of residential buildings. The article offers a method to calculate the efficiency of residential buildings reconstruction.

A high-speed computerized tomography image reconstruction using direct two-dimensional Fourier transform method

International Nuclear Information System (INIS)

Niki, Noboru; Mizutani, Toshio; Takahashi, Yoshizo; Inouye, Tamon.

1983-01-01

The nescessity for developing real-time computerized tomography (CT) aiming at the dynamic observation of organs such as hearts has lately been advocated. It is necessary for its realization to reconstruct the images which are markedly faster than present CTs. Although various reconstructing methods have been proposed so far, the method practically employed at present is the filtered backprojection (FBP) method only, which can give high quality image reconstruction, but takes much computing time. In the past, the two-dimensional Fourier transform (TFT) method was regarded as unsuitable to practical use because the quality of images obtained was not good, in spite of the promising method for high speed reconstruction because of its less computing time. However, since it was revealed that the image quality by TFT method depended greatly on interpolation accuracy in two-dimensional Fourier space, the authors have developed a high-speed calculation algorithm that can obtain high quality images by pursuing the relationship between the image quality and the interpolation method. In this case, radial data sampling points in Fourier space are increased to β-th power of 2 times, and the linear or spline interpolation is used. Comparison of this method with the present FBP method resulted in the conclusion that the image quality is almost the same in practical image matrix, the computational time by TFT method becomes about 1/10 of FBP method, and the memory capacity also reduces by about 20 %. (Wakatsuki, Y.)

MO-DE-207A-07: Filtered Iterative Reconstruction (FIR) Via Proximal Forward-Backward Splitting: A Synergy of Analytical and Iterative Reconstruction Method for CT

International Nuclear Information System (INIS)

Gao, H

2016-01-01

Purpose: This work is to develop a general framework, namely filtered iterative reconstruction (FIR) method, to incorporate analytical reconstruction (AR) method into iterative reconstruction (IR) method, for enhanced CT image quality. Methods: FIR is formulated as a combination of filtered data fidelity and sparsity regularization, and then solved by proximal forward-backward splitting (PFBS) algorithm. As a result, the image reconstruction decouples data fidelity and image regularization with a two-step iterative scheme, during which an AR-projection step updates the filtered data fidelity term, while a denoising solver updates the sparsity regularization term. During the AR-projection step, the image is projected to the data domain to form the data residual, and then reconstructed by certain AR to a residual image which is in turn weighted together with previous image iterate to form next image iterate. Since the eigenvalues of AR-projection operator are close to the unity, PFBS based FIR has a fast convergence. Results: The proposed FIR method is validated in the setting of circular cone-beam CT with AR being FDK and total-variation sparsity regularization, and has improved image quality from both AR and IR. For example, AIR has improved visual assessment and quantitative measurement in terms of both contrast and resolution, and reduced axial and half-fan artifacts. Conclusion: FIR is proposed to incorporate AR into IR, with an efficient image reconstruction algorithm based on PFBS. The CBCT results suggest that FIR synergizes AR and IR with improved image quality and reduced axial and half-fan artifacts. The authors was partially supported by the NSFC (#11405105), the 973 Program (#2015CB856000), and the Shanghai Pujiang Talent Program (#14PJ1404500).

A path flux analysis method for the reduction of detailed chemical kinetic mechanisms

Energy Technology Data Exchange (ETDEWEB)

Sun, Wenting; Ju, Yiguang [Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, NJ 08544 (United States); Chen, Zheng [State Key Laboratory for Turbulence and Complex Systems, College of Engineering, Peking University, Beijing 100871 (China); Gou, Xiaolong [School of Power Engineering, Chongqing University, Chongqing 400044 (China)

2010-07-15

A direct path flux analysis (PFA) method for kinetic mechanism reduction is proposed and validated by using high temperature ignition, perfect stirred reactors, and steady and unsteady flame propagations of n-heptane and n-decane/air mixtures. The formation and consumption fluxes of each species at multiple reaction path generations are analyzed and used to identify the important reaction pathways and the associated species. The formation and consumption path fluxes used in this method retain flux conservation information and are used to define the path indexes for the first and the second generation reaction paths related to a targeted species. Based on the indexes of each reaction path for the first and second generations, different sized reduced chemical mechanisms which contain different number of species are generated. The reduced mechanisms of n-heptane and n-decane obtained by using the present method are compared to those generated by the direct relation graph (DRG) method. The reaction path analysis for n-decane is conducted to demonstrate the validity of the present method. The comparisons of the ignition delay times, flame propagation speeds, flame structures, and unsteady spherical flame propagation processes showed that with either the same or significantly less number of species, the reduced mechanisms generated by the present PFA are more accurate than that of DRG in a broad range of initial pressures and temperatures. The method is also integrated with the dynamic multi-timescale method and a further increase of computation efficiency is achieved. (author)

System and method for image reconstruction, analysis, and/or de-noising

KAUST Repository

Laleg-Kirati, Taous-Meriem; Kaisserli, Zineb

2015-01-01

A method and system can analyze, reconstruct, and/or denoise an image. The method and system can include interpreting a signal as a potential of a Schrödinger operator, decomposing the signal into squared eigenfunctions, reducing a design parameter

Analysis of dental root apical morphology: a new method for dietary reconstructions in primates.

Science.gov (United States)

Hamon, NoÉmie; Emonet, Edouard-Georges; Chaimanee, Yaowalak; Guy, Franck; Tafforeau, Paul; Jaeger, Jean-Jacques

2012-06-01

The reconstruction of paleo-diets is an important task in the study of fossil primates. Previously, paleo-diet reconstructions were performed using different methods based on extant primate models. In particular, dental microwear or isotopic analyses provided accurate reconstructions for some fossil primates. However, there is sometimes difficult or impossible to apply these methods to fossil material. Therefore, the development of new, independent methods of diet reconstructions is crucial to improve our knowledge of primates paleobiology and paleoecology. This study aims to investigate the correlation between tooth root apical morphology and diet in primates, and its potential for paleo-diet reconstructions. Dental roots are composed of two portions: the eruptive portion with a smooth and regular surface, and the apical penetrative portion which displays an irregular and corrugated surface. Here, the angle formed by these two portions (aPE), and the ratio of penetrative portion over total root length (PPI), are calculated for each mandibular tooth root. A strong correlation between these two variables and the proportion of some food types (fruits, leaves, seeds, animal matter, and vertebrates) in diet is found, allowing the use of tooth root apical morphology as a tool for dietary reconstructions in primates. The method was then applied to the fossil hominoid Khoratpithecus piriyai, from the Late Miocene of Thailand. The paleo-diet deduced from aPE and PPI is dominated by fruits (>50%), associated with animal matter (1-25%). Leaves, vertebrates and most probably seeds were excluded from the diet of Khoratpithecus, which is consistent with previous studies. Copyright © 2012 Wiley Periodicals, Inc.

Hadron Energy Reconstruction for ATLAS Barrel Combined Calorimeter Using Non-Parametrical Method

CERN Document Server

Kulchitskii, Yu A

2000-01-01

Hadron energy reconstruction for the ATLAS barrel prototype combined calorimeter in the framework of the non-parametrical method is discussed. The non-parametrical method utilizes only the known e/h ratios and the electron calibration constants and does not require the determination of any parameters by a minimization technique. Thus, this technique lends itself to fast energy reconstruction in a first level trigger. The reconstructed mean values of the hadron energies are within \\pm1% of the true values and the fractional energy resolution is [(58\\pm 3)%{\\sqrt{GeV}}/\\sqrt{E}+(2.5\\pm0.3)%]\\bigoplus(1.7\\pm0.2) GeV/E. The value of the e/h ratio obtained for the electromagnetic compartment of the combined calorimeter is 1.74\\pm0.04. Results of a study of the longitudinal hadronic shower development are also presented.

Inter-comparison of Flux-Gradient and Relaxed Eddy Accumulation Methods for Measuring Ammonia Flux Above a Corn Canopy in Central Illinois, USA

Science.gov (United States)

Nelson, A. J.; Koloutsou-Vakakis, S.; Rood, M. J.; Lichiheb, N.; Heuer, M.; Myles, L.

2017-12-01

Ammonia (NH3) is a precursor to fine particulate matter (PM) in the ambient atmosphere. Agricultural activities represent over 80% of anthropogenic emissions of NH3 in the United States. The use of nitrogen-based fertilizers contribute > 50% of total NH3 emissions in central Illinois. The U.S. EPA Science Advisory Board has called for improved methods to measure, model, and report atmospheric NH3 concentrations and emissions from agriculture. High uncertainties in the temporal and spatial distribution of NH3 emissions contribute to poor performance of air quality models in predicting ambient PM concentrations. This study reports and compares NH­3 flux measurements of differing temporal resolution obtained with two methods: relaxed eddy accumulation (REA) and flux-gradient (FG). REA and FG systems were operated concurrently above a corn canopy at the University of Illinois at Urbana-Champaign (UIUC) Energy Biosciences Institute (EBI) Energy Farm during the 2014 corn-growing season. The REA system operated during daytime, providing average fluxes over four-hour sampling intervals, where time resolution was limited by detection limit of denuders. The FG system employed a cavity ring-down spectrometer, and was operated continuously, reporting 30 min flux averages. A flux-footprint evaluation was used for quality control, resulting in 1,178 qualified FG measurements, 82 of which were coincident with REA measurements. Similar emission trends were observed with both systems, with peak NH3 emission observed one week after fertilization. For all coincident samples, mean NH3 flux was 205 ± 300 ng-N-m2s-1 and 110 ± 256 ng-N-m2s-1 as measured with REA and FG, respectively, where positive flux indicates emission. This is the first reported inter-comparison of REA and FG methods as used for quantifying NH3 fluxes from cropland. Preliminary analysis indicates the improved temporal resolution and continuous sampling enabled by FG allow for the identification of emission pulses

Developing a framework for evaluating tallgrass prairie reconstruction methods and management

Science.gov (United States)

Larson, Diane L.; Ahlering, Marissa; Drobney, Pauline; Esser, Rebecca; Larson, Jennifer L.; Viste-Sparkman, Karen

2018-01-01

The thousands of hectares of prairie reconstructed each year in the tallgrass prairie biome can provide a valuable resource for evaluation of seed mixes, planting methods, and post-planting management if methods used and resulting characteristics of the prairies are recorded and compiled in a publicly accessible database. The objective of this study was to evaluate the use of such data to understand the outcomes of reconstructions over a 10-year period at two U.S. Fish and Wildlife Service refuges. Variables included number of species planted, seed source (combine-harvest or combine-harvest plus hand-collected), fire history, and planting method and season. In 2015 we surveyed vegetation on 81 reconstructions and calculated proportion of planted species observed; introduced species richness; native species richness, evenness and diversity; and mean coefficient of conservatism. We conducted exploratory analyses to learn how implied communities based on seed mix compared with observed vegetation; which seeding or management variables were influential in the outcome of the reconstructions; and consistency of responses between the two refuges. Insights from this analysis include: 1) proportion of planted species observed in 2015 declined as planted richness increased, but lack of data on seeding rate per species limited conclusions about value of added species; 2) differing responses to seeding and management between the two refuges suggest the importance of geographic variability that could be addressed using a public database; and 3) variables such as fire history are difficult to quantify consistently and should be carefully evaluated in the context of a public data repository.

Simple method of modelling of digital holograms registering and their optical reconstruction

International Nuclear Information System (INIS)

Evtikhiev, N N; Cheremkhin, P A; Krasnov, V V; Kurbatova, E A; Molodtsov, D Yu; Porshneva, L A; Rodin, V G

2016-01-01

The technique of modeling of digital hologram recording and image optical reconstruction from these holograms is described. The method takes into account characteristics of the object, digital camera's photosensor and spatial light modulator used for digital holograms displaying. Using the technique, equipment can be chosen for experiments for obtaining good reconstruction quality and/or holograms diffraction efficiency. Numerical experiments were conducted. (paper)

Tomography reconstruction methods for damage diagnosis of wood structure in construction field

Science.gov (United States)

Qiu, Qiwen; Lau, Denvid

2018-03-01

The structural integrity of wood building element plays a critical role in the public safety, which requires effective methods for diagnosis of internal damage inside the wood body. Conventionally, the non-destructive testing (NDT) methods such as X-ray computed tomography, thermography, radar imaging reconstruction method, ultrasonic tomography, nuclear magnetic imaging techniques, and sonic tomography have been used to obtain the information about the internal structure of wood. In this paper, the applications, advantages and disadvantages of these traditional tomography methods are reviewed. Additionally, the present article gives an overview of recently developed tomography approach that relies on the use of mechanical and electromagnetic waves for assessing the structural integrity of wood buildings. This developed tomography reconstruction method is believed to provide a more accurate, reliable, and comprehensive assessment of wood structural integrity

Reconstruction of electrical impedance tomography (EIT) images based on the expectation maximum (EM) method.

Science.gov (United States)

Wang, Qi; Wang, Huaxiang; Cui, Ziqiang; Yang, Chengyi

2012-11-01

Electrical impedance tomography (EIT) calculates the internal conductivity distribution within a body using electrical contact measurements. The image reconstruction for EIT is an inverse problem, which is both non-linear and ill-posed. The traditional regularization method cannot avoid introducing negative values in the solution. The negativity of the solution produces artifacts in reconstructed images in presence of noise. A statistical method, namely, the expectation maximization (EM) method, is used to solve the inverse problem for EIT in this paper. The mathematical model of EIT is transformed to the non-negatively constrained likelihood minimization problem. The solution is obtained by the gradient projection-reduced Newton (GPRN) iteration method. This paper also discusses the strategies of choosing parameters. Simulation and experimental results indicate that the reconstructed images with higher quality can be obtained by the EM method, compared with the traditional Tikhonov and conjugate gradient (CG) methods, even with non-negative processing. Copyright © 2012 ISA. Published by Elsevier Ltd. All rights reserved.

An eigenfunction method for reconstruction of large-scale and high-contrast objects.

Science.gov (United States)

Waag, Robert C; Lin, Feng; Varslot, Trond K; Astheimer, Jeffrey P

2007-07-01

A multiple-frequency inverse scattering method that uses eigenfunctions of a scattering operator is extended to image large-scale and high-contrast objects. The extension uses an estimate of the scattering object to form the difference between the scattering by the object and the scattering by the estimate of the object. The scattering potential defined by this difference is expanded in a basis of products of acoustic fields. These fields are defined by eigenfunctions of the scattering operator associated with the estimate. In the case of scattering objects for which the estimate is radial, symmetries in the expressions used to reconstruct the scattering potential greatly reduce the amount of computation. The range of parameters over which the reconstruction method works well is illustrated using calculated scattering by different objects. The method is applied to experimental data from a 48-mm diameter scattering object with tissue-like properties. The image reconstructed from measurements has, relative to a conventional B-scan formed using a low f-number at the same center frequency, significantly higher resolution and less speckle, implying that small, high-contrast structures can be demonstrated clearly using the extended method.

Critical flux determination by flux-stepping

DEFF Research Database (Denmark)

Beier, Søren; Jonsson, Gunnar Eigil

2010-01-01

In membrane filtration related scientific literature, often step-by-step determined critical fluxes are reported. Using a dynamic microfiltration device, it is shown that critical fluxes determined from two different flux-stepping methods are dependent upon operational parameters such as step...... length, step height, and.flux start level. Filtrating 8 kg/m(3) yeast cell suspensions by a vibrating 0.45 x 10(-6) m pore size microfiltration hollow fiber module, critical fluxes from 5.6 x 10(-6) to 1.2 x 10(-5) m/s have been measured using various step lengths from 300 to 1200 seconds. Thus......, such values are more or less useless in itself as critical flux predictors, and constant flux verification experiments have to be conducted to check if the determined critical fluxes call predict sustainable flux regimes. However, it is shown that using the step-by-step predicted critical fluxes as start...

Extension of the heat flux method to subatmospheric pressures

NARCIS (Netherlands)

Bosschaart, K.J.; Goey, de L.P.H.

2004-01-01

The heat flux method for measuring laminar burning velocities has been extended to subatmospheric pressures, down to 80mbar. The new setup is described and adaptations necessary for the new conditions are analyzed. This includes a new burner plate to compensate for the decrease of sensitivity of the

Inter-comparison of different direct and indirect methods to determine radon flux from soil

International Nuclear Information System (INIS)

Grossi, C.; Vargas, A.; Camacho, A.; Lopez-Coto, I.; Bolivar, J.P.; Xia Yu; Conen, F.

2011-01-01

The physical and chemical characteristics of radon gas make it a good tracer for use in the application of atmospheric transport models. For this purpose the radon source needs to be known on a global scale and this is difficult to achieve by only direct experimental methods. However, indirect methods can provide radon flux maps on larger scales, but their reliability has to be carefully checked. It is the aim of this work to compare radon flux values obtained by direct and indirect methods in a measurement campaign performed in the summer of 2008. Different systems to directly measure radon flux from the soil surface and to measure the related parameters terrestrial γ dose and 226 Ra activity in soil, for indirect estimation of radon flux, were tested. Four eastern Spanish sites with different geological and soil characteristics were selected: Teruel, Los Pedrones, Quintanar de la Orden and Madrid. The study shows the usefulness of both direct and indirect methods for obtaining radon flux data. Direct radon flux measurements by continuous and integrated monitors showed a coefficient of variation between 10% and 23%. At the same time, indirect methods based on correlations between 222 Rn and terrestrial γ dose rate, or 226 Ra activity in soil, provided results similar to the direct measurements, when these proxies were directly measured at the site. Larger discrepancies were found when proxy values were extracted from existing data bases. The participating members involved in the campaign study were the Institute of Energy Technology (INTE) of the Technical University of Catalonia (UPC), Huelva University (UHU), and Basel University (BASEL).

Three-dimensional Reconstruction Method Study Based on Interferometric Circular SAR

Directory of Open Access Journals (Sweden)

Hou Liying

2016-10-01

Full Text Available Circular Synthetic Aperture Radar (CSAR can acquire targets’ scattering information in all directions by a 360° observation, but a single-track CSAR cannot efficiently obtain height scattering information for a strong directive scatter. In this study, we examine the typical target of the three-dimensional circular SAR interferometry theoryand validate the theory in a darkroom experiment. We present a 3D reconstruction of the actual tank metal model of interferometric CSAR for the first time, verify the validity of the method, and demonstrate the important potential applications of combining 3D reconstruction with omnidirectional observation.

Rehanging Reynolds at the British Institution: Methods for Reconstructing Ephemeral Displays

Directory of Open Access Journals (Sweden)

Catherine Roach

2016-11-01

Full Text Available Reconstructions of historic exhibitions made with current technologies can present beguiling illusions, but they also put us in danger of recreating the past in our own image. This article and the accompanying reconstruction explore methods for representing lost displays, with an emphasis on visualizing uncertainty, illuminating process, and understanding the mediated nature of period images. These issues are highlighted in a partial recreation of a loan show held at the British Institution, London, in 1823, which featured the works of Sir Joshua Reynolds alongside continental old masters. This recreation demonstrates how speculative reconstructions can nonetheless shed light on ephemeral displays, revealing powerful visual and conceptual dialogues that took place on the crowded walls of nineteenth-century exhibitions.

A hybrid 3D SEM reconstruction method optimized for complex geologic material surfaces.

Science.gov (United States)

Yan, Shang; Adegbule, Aderonke; Kibbey, Tohren C G

2017-08-01

Reconstruction methods are widely used to extract three-dimensional information from scanning electron microscope (SEM) images. This paper presents a new hybrid reconstruction method that combines stereoscopic reconstruction with shape-from-shading calculations to generate highly-detailed elevation maps from SEM image pairs. The method makes use of an imaged glass sphere to determine the quantitative relationship between observed intensity and angles between the beam and surface normal, and the detector and surface normal. Two specific equations are derived to make use of image intensity information in creating the final elevation map. The equations are used together, one making use of intensities in the two images, the other making use of intensities within a single image. The method is specifically designed for SEM images captured with a single secondary electron detector, and is optimized to capture maximum detail from complex natural surfaces. The method is illustrated with a complex structured abrasive material, and a rough natural sand grain. Results show that the method is capable of capturing details such as angular surface features, varying surface roughness, and surface striations. Copyright © 2017 Elsevier Ltd. All rights reserved.

Potential benefit of the CT adaptive statistical iterative reconstruction method for pediatric cardiac diagnosis

Science.gov (United States)

Miéville, Frédéric A.; Ayestaran, Paul; Argaud, Christophe; Rizzo, Elena; Ou, Phalla; Brunelle, Francis; Gudinchet, François; Bochud, François; Verdun, Francis R.

2010-04-01

Adaptive Statistical Iterative Reconstruction (ASIR) is a new imaging reconstruction technique recently introduced by General Electric (GE). This technique, when combined with a conventional filtered back-projection (FBP) approach, is able to improve the image noise reduction. To quantify the benefits provided on the image quality and the dose reduction by the ASIR method with respect to the pure FBP one, the standard deviation (SD), the modulation transfer function (MTF), the noise power spectrum (NPS), the image uniformity and the noise homogeneity were examined. Measurements were performed on a control quality phantom when varying the CT dose index (CTDIvol) and the reconstruction kernels. A 64-MDCT was employed and raw data were reconstructed with different percentages of ASIR on a CT console dedicated for ASIR reconstruction. Three radiologists also assessed a cardiac pediatric exam reconstructed with different ASIR percentages using the visual grading analysis (VGA) method. For the standard, soft and bone reconstruction kernels, the SD is reduced when the ASIR percentage increases up to 100% with a higher benefit for low CTDIvol. MTF medium frequencies were slightly enhanced and modifications of the NPS shape curve were observed. However for the pediatric cardiac CT exam, VGA scores indicate an upper limit of the ASIR benefit. 40% of ASIR was observed as the best trade-off between noise reduction and clinical realism of organ images. Using phantom results, 40% of ASIR corresponded to an estimated dose reduction of 30% under pediatric cardiac protocol conditions. In spite of this discrepancy between phantom and clinical results, the ASIR method is as an important option when considering the reduction of radiation dose, especially for pediatric patients.

A new method for the reconstruction of very-high-energy gamma-ray spectra and application to galatic cosmic-ray accelerators

Energy Technology Data Exchange (ETDEWEB)

Fernandes, Milton Virgilio

2014-09-15

In this thesis, high-energy (HE; E>0.1 GeV) and very-high-energy (VHE; E>0.1 TeV) γ-ray data were investigated to probe Galactic stellar clusters (SCs) and star-forming regions (SFRs) as sites of hadronic Galactic cosmic-ray (GCR) acceleration. In principle, massive SCs and SFRs could accelerate GCRs at the shock front of the collective SC wind fed by the individual high-mass stars. The subsequently produced VHE γ rays would be measured with imaging air-Cherenkov telescopes (IACTs). A couple of the Galactic VHE γ-ray sources, including those potentially produced by SCs, fill a large fraction of the field-of-view (FoV) and require additional observations of source-free regions to determine the dominant background for a spectral reconstruction. A new method of reconstructing spectra for such extended sources without the need of further observations is developed: the Template Background Spectrum (TBS). This methods is based on a method to generate skymaps, which determines background in parameter space. The idea is the creation of a look-up of the background normalisation in energy, zenith angle, and angular separation and to account for possible systematics. The results obtained with TBS and state-of-the-art background-estimation methods on H.E.S.S. data are in good agreement. With TBS even those sources could be reconstructed that normally would need further observations. Therefore, TBS is the third method to reconstruct VHE γ-ray spectra, but the first one to not need additional observations in the analysis of extended sources. The discovery of the largest VHE γ-ray source HESSJ1646-458 (2.2 in size) towards the SC Westerlund 1 (Wd1) can be plausibly explained by the SC-wind scenario. But owing to its size, other alternative counterparts to the TeV emission (pulsar, binary system, magnetar) were found in the FoV. Therefore, an association of HESSJ1646-458 with the SC is favoured, but cannot be confirmed. The SC Pismis 22 is located in the centre of the

A new method for the reconstruction of very-high-energy gamma-ray spectra and application to galatic cosmic-ray accelerators

International Nuclear Information System (INIS)

Fernandes, Milton Virgilio

2014-09-01

In this thesis, high-energy (HE; E>0.1 GeV) and very-high-energy (VHE; E>0.1 TeV) γ-ray data were investigated to probe Galactic stellar clusters (SCs) and star-forming regions (SFRs) as sites of hadronic Galactic cosmic-ray (GCR) acceleration. In principle, massive SCs and SFRs could accelerate GCRs at the shock front of the collective SC wind fed by the individual high-mass stars. The subsequently produced VHE γ rays would be measured with imaging air-Cherenkov telescopes (IACTs). A couple of the Galactic VHE γ-ray sources, including those potentially produced by SCs, fill a large fraction of the field-of-view (FoV) and require additional observations of source-free regions to determine the dominant background for a spectral reconstruction. A new method of reconstructing spectra for such extended sources without the need of further observations is developed: the Template Background Spectrum (TBS). This methods is based on a method to generate skymaps, which determines background in parameter space. The idea is the creation of a look-up of the background normalisation in energy, zenith angle, and angular separation and to account for possible systematics. The results obtained with TBS and state-of-the-art background-estimation methods on H.E.S.S. data are in good agreement. With TBS even those sources could be reconstructed that normally would need further observations. Therefore, TBS is the third method to reconstruct VHE γ-ray spectra, but the first one to not need additional observations in the analysis of extended sources. The discovery of the largest VHE γ-ray source HESSJ1646-458 (2.2 in size) towards the SC Westerlund 1 (Wd1) can be plausibly explained by the SC-wind scenario. But owing to its size, other alternative counterparts to the TeV emission (pulsar, binary system, magnetar) were found in the FoV. Therefore, an association of HESSJ1646-458 with the SC is favoured, but cannot be confirmed. The SC Pismis 22 is located in the centre of the

A low error reconstruction method for confocal holography to determine 3-dimensional properties

Energy Technology Data Exchange (ETDEWEB)

Jacquemin, P.B., E-mail: pbjacque@nps.edu [Mechanical Engineering, University of Victoria, EOW 548,800 Finnerty Road, Victoria, BC (Canada); Herring, R.A. [Mechanical Engineering, University of Victoria, EOW 548,800 Finnerty Road, Victoria, BC (Canada)

2012-06-15

A confocal holography microscope developed at the University of Victoria uniquely combines holography with a scanning confocal microscope to non-intrusively measure fluid temperatures in three-dimensions (Herring, 1997), (Abe and Iwasaki, 1999), (Jacquemin et al., 2005). The Confocal Scanning Laser Holography (CSLH) microscope was built and tested to verify the concept of 3D temperature reconstruction from scanned holograms. The CSLH microscope used a focused laser to non-intrusively probe a heated fluid specimen. The focused beam probed the specimen instead of a collimated beam in order to obtain different phase-shift data for each scan position. A collimated beam produced the same information for scanning along the optical propagation z-axis. No rotational scanning mechanisms were used in the CSLH microscope which restricted the scan angle to the cone angle of the probe beam. Limited viewing angle scanning from a single view point window produced a challenge for tomographic 3D reconstruction. The reconstruction matrices were either singular or ill-conditioned making reconstruction with significant error or impossible. Establishing boundary conditions with a particular scanning geometry resulted in a method of reconstruction with low error referred to as 'wily'. The wily reconstruction method can be applied to microscopy situations requiring 3D imaging where there is a single viewpoint window, a probe beam with high numerical aperture, and specified boundary conditions for the specimen. The issues and progress of the wily algorithm for the CSLH microscope are reported herein. -- Highlights: Black-Right-Pointing-Pointer Evaluation of an optical confocal holography device to measure 3D temperature of a heated fluid. Black-Right-Pointing-Pointer Processing of multiple holograms containing the cumulative refractive index through the fluid. Black-Right-Pointing-Pointer Reconstruction issues due to restricting angular scanning to the numerical aperture of the

A low error reconstruction method for confocal holography to determine 3-dimensional properties

International Nuclear Information System (INIS)

Jacquemin, P.B.; Herring, R.A.

2012-01-01

A confocal holography microscope developed at the University of Victoria uniquely combines holography with a scanning confocal microscope to non-intrusively measure fluid temperatures in three-dimensions (Herring, 1997), (Abe and Iwasaki, 1999), (Jacquemin et al., 2005). The Confocal Scanning Laser Holography (CSLH) microscope was built and tested to verify the concept of 3D temperature reconstruction from scanned holograms. The CSLH microscope used a focused laser to non-intrusively probe a heated fluid specimen. The focused beam probed the specimen instead of a collimated beam in order to obtain different phase-shift data for each scan position. A collimated beam produced the same information for scanning along the optical propagation z-axis. No rotational scanning mechanisms were used in the CSLH microscope which restricted the scan angle to the cone angle of the probe beam. Limited viewing angle scanning from a single view point window produced a challenge for tomographic 3D reconstruction. The reconstruction matrices were either singular or ill-conditioned making reconstruction with significant error or impossible. Establishing boundary conditions with a particular scanning geometry resulted in a method of reconstruction with low error referred to as “wily”. The wily reconstruction method can be applied to microscopy situations requiring 3D imaging where there is a single viewpoint window, a probe beam with high numerical aperture, and specified boundary conditions for the specimen. The issues and progress of the wily algorithm for the CSLH microscope are reported herein. -- Highlights: ► Evaluation of an optical confocal holography device to measure 3D temperature of a heated fluid. ► Processing of multiple holograms containing the cumulative refractive index through the fluid. ► Reconstruction issues due to restricting angular scanning to the numerical aperture of the beam. ► Minimizing tomographic reconstruction error by defining boundary

High-speed fan-beam reconstruction using direct two-dimensional Fourier transform method

International Nuclear Information System (INIS)

Niki, Noboru; Mizutani, Toshio; Takahashi, Yoshizo; Inouye, Tamon.

1984-01-01

Since the first development of X-ray computer tomography (CT), various efforts have been made to obtain high quality of high-speed image. However, the development of high resolution CT and the ultra-high speed CT to be applied to hearts is still desired. The X-ray beam scanning method was already changed from the parallel beam system to the fan-beam system in order to greatly shorten the scanning time. Also, the filtered back projection (DFBP) method has been employed to directly processing fan-beam projection data as reconstruction method. Although the two-dimensional Fourier transform (TFT) method significantly faster than FBP method was proposed, it has not been sufficiently examined for fan-beam projection data. Thus, the ITFT method was investigated, which first executes rebinning algorithm to convert the fan-beam projection data to the parallel beam projection data, thereafter, uses two-dimensional Fourier transform. By this method, although high speed is expected, the reconstructed images might be degraded due to the adoption of rebinning algorithm. Therefore, the effect of the interpolation error of rebinning algorithm on the reconstructed images has been analyzed theoretically, and finally, the result of the employment of spline interpolation which allows the acquisition of high quality images with less errors has been shown by the numerical and visual evaluation based on simulation and actual data. Computation time was reduced to 1/15 for the image matrix of 512 and to 1/30 for doubled matrix. (Wakatsuki, Y.)

[Application of N-isopropyl-p-[123I] iodoamphetamine quantification of regional cerebral blood flow using iterative reconstruction methods: selection of the optimal reconstruction method and optimization of the cutoff frequency of the preprocessing filter].

Science.gov (United States)

Asazu, Akira; Hayashi, Masuo; Arai, Mami; Kumai, Yoshiaki; Akagi, Hiroyuki; Okayama, Katsuyoshi; Narumi, Yoshifumi

2013-05-01

In cerebral blood flow tests using N-Isopropyl-p-[123I] Iodoamphetamine "I-IMP, quantitative results of greater accuracy than possible using the autoradiography (ARG) method can be obtained with attenuation and scatter correction and image reconstruction by filtered back projection (FBP). However, the cutoff frequency of the preprocessing Butterworth filter affects the quantitative value; hence, we sought an optimal cutoff frequency, derived from the correlation between the FBP method and Xenon-enhanced computed tomography (XeCT)/cerebral blood flow (CBF). In this study, we reconstructed images using ordered subsets expectation maximization (OSEM), a method of successive approximation which has recently come into wide use, and also three-dimensional (3D)-OSEM, a method by which the resolution can be corrected with the addition of collimator broad correction, to examine the effects on the regional cerebral blood flow (rCBF) quantitative value of changing the cutoff frequency, and to determine whether successive approximation is applicable to cerebral blood flow quantification. Our results showed that quantification of greater accuracy was obtained with reconstruction employing the 3D-OSEM method and using a cutoff frequency set near 0.75-0.85 cycles/cm, which is higher than the frequency used in image reconstruction by the ordinary FBP method.

Application of N-isopropyl-p-[123I] iodoamphetamine quantification of regional cerebral blood flow using iterative reconstruction methods. Selection of the optimal reconstruction method and optimization of the cutoff frequency of the preprocessing filter

International Nuclear Information System (INIS)

Asazu, Akira; Hayashi, Masuo; Arai, Mami; Kumai, Yoshiaki; Akagi, Hiroyuki; Okayama, Katsuyoshi; Narumi, Yoshifumi

2013-01-01

In cerebral blood flow tests using N-Isopropyl-p-[ 123 I] Iodoamphetamine 123 I-IMP, quantitative results of greater accuracy than possible using the autoradiography (ARG) method can be obtained with attenuation and scatter correction and image reconstruction by filtered back projection (FBP). However, the cutoff frequency of the preprocessing Butterworth filter affects the quantitative value; hence, we sought an optimal cutoff frequency, derived from the correlation between the FBP method and Xenon-enhanced computed tomography (XeCT)/cerebral blood flow (CBF). In this study, we reconstructed images using ordered subsets expectation maximization (OSEM), a method of successive approximation which has recently come into wide use, and also three-dimensional (3D)-OSEM, a method by which the resolution can be corrected with the addition of collimator broad correction, to examine the effects on the regional cerebral blood flow (rCBF) quantitative value of changing the cutoff frequency, and to determine whether successive approximation is applicable to cerebral blood flow quantification. Our results showed that quantification of greater accuracy was obtained with reconstruction employing the 3D-OSEM method and using a cutoff frequency set near 0.75-0.85 cycles/cm, which is higher than the frequency used in image reconstruction by the ordinary FBP method. (author)

Clinical correlative evaluation of an iterative method for reconstruction of brain SPECT images

International Nuclear Information System (INIS)

Nobili, Flavio; Vitali, Paolo; Calvini, Piero; Bollati, Francesca; Girtler, Nicola; Delmonte, Marta; Mariani, Giuliano; Rodriguez, Guido

2001-01-01

Background: Brain SPECT and PET investigations have showed discrepancies in Alzheimer's disease (AD) when considering data deriving from deeply located structures, such as the mesial temporal lobe. These discrepancies could be due to a variety of factors, including substantial differences in gamma-cameras and underlying technology. Mesial temporal structures are deeply located within the brain and the commonly used Filtered Back-Projection (FBP) technique does not fully take into account either the physical parameters of gamma-cameras or geometry of collimators. In order to overcome these limitations, alternative reconstruction methods have been proposed, such as the iterative method of the Conjugate Gradients with modified matrix (CG). However, the clinical applications of these methods have so far been only anecdotal. The present study was planned to compare perfusional SPECT data as derived from the conventional FBP method and from the iterative CG method, which takes into account the geometrical and physical characteristics of the gamma-camera, by a correlative approach with neuropsychology. Methods: Correlations were compared between perfusion of the hippocampal region, as achieved by both the FBP and the CG reconstruction methods, and a short-memory test (Selective Reminding Test, SRT), specifically addressing one of its function. A brain-dedicated camera (CERASPECT) was used for SPECT studies with 99m Tc-hexamethylpropylene-amine-oxime in 23 consecutive patients (mean age: 74.2±6.5) with mild (Mini-Mental Status Examination score ≥15, mean 20.3±3), probable AD. Counts from a hippocampal region in each hemisphere were referred to the average thalamic counts. Results: Hippocampal perfusion significantly correlated with the MMSE score with similar statistical significance (p<0.01) between the two reconstruction methods. Correlation between hippocampal perfusion and the SRT score was better with the CG method (r=0.50 for both hemispheres, p<0.01) than with

Clinical correlative evaluation of an iterative method for reconstruction of brain SPECT images

Energy Technology Data Exchange (ETDEWEB)

Nobili, Flavio E-mail: fnobili@smartino.ge.it; Vitali, Paolo; Calvini, Piero; Bollati, Francesca; Girtler, Nicola; Delmonte, Marta; Mariani, Giuliano; Rodriguez, Guido

2001-08-01

Background: Brain SPECT and PET investigations have showed discrepancies in Alzheimer's disease (AD) when considering data deriving from deeply located structures, such as the mesial temporal lobe. These discrepancies could be due to a variety of factors, including substantial differences in gamma-cameras and underlying technology. Mesial temporal structures are deeply located within the brain and the commonly used Filtered Back-Projection (FBP) technique does not fully take into account either the physical parameters of gamma-cameras or geometry of collimators. In order to overcome these limitations, alternative reconstruction methods have been proposed, such as the iterative method of the Conjugate Gradients with modified matrix (CG). However, the clinical applications of these methods have so far been only anecdotal. The present study was planned to compare perfusional SPECT data as derived from the conventional FBP method and from the iterative CG method, which takes into account the geometrical and physical characteristics of the gamma-camera, by a correlative approach with neuropsychology. Methods: Correlations were compared between perfusion of the hippocampal region, as achieved by both the FBP and the CG reconstruction methods, and a short-memory test (Selective Reminding Test, SRT), specifically addressing one of its function. A brain-dedicated camera (CERASPECT) was used for SPECT studies with {sup 99m}Tc-hexamethylpropylene-amine-oxime in 23 consecutive patients (mean age: 74.2{+-}6.5) with mild (Mini-Mental Status Examination score {>=}15, mean 20.3{+-}3), probable AD. Counts from a hippocampal region in each hemisphere were referred to the average thalamic counts. Results: Hippocampal perfusion significantly correlated with the MMSE score with similar statistical significance (p<0.01) between the two reconstruction methods. Correlation between hippocampal perfusion and the SRT score was better with the CG method (r=0.50 for both hemispheres, p<0

Method and apparatus for reconstructing in-cylinder pressure and correcting for signal decay

Science.gov (United States)

Huang, Jian

2013-03-12

A method comprises steps for reconstructing in-cylinder pressure data from a vibration signal collected from a vibration sensor mounted on an engine component where it can generate a signal with a high signal-to-noise ratio, and correcting the vibration signal for errors introduced by vibration signal charge decay and sensor sensitivity. The correction factors are determined as a function of estimated motoring pressure and the measured vibration signal itself with each of these being associated with the same engine cycle. Accordingly, the method corrects for charge decay and changes in sensor sensitivity responsive to different engine conditions to allow greater accuracy in the reconstructed in-cylinder pressure data. An apparatus is also disclosed for practicing the disclosed method, comprising a vibration sensor, a data acquisition unit for receiving the vibration signal, a computer processing unit for processing the acquired signal and a controller for controlling the engine operation based on the reconstructed in-cylinder pressure.

Characterization of a detector chain using a FPGA-based time-to-digital converter to reconstruct the three-dimensional coordinates of single particles at high flux

Science.gov (United States)

Nogrette, F.; Heurteau, D.; Chang, R.; Bouton, Q.; Westbrook, C. I.; Sellem, R.; Clément, D.

2015-11-01

We report on the development of a novel FPGA-based time-to-digital converter and its implementation in a detection chain that records the coordinates of single particles along three dimensions. The detector is composed of micro-channel plates mounted on top of a cross delay line and connected to fast electronics. We demonstrate continuous recording of the timing signals from the cross delay line at rates up to 4.1 × 106 s-1 and three-dimensional reconstruction of the coordinates up to 3.2 × 106 particles per second. From the imaging of a calibrated structure we measure the in-plane resolution of the detector to be 140(20) μm at a flux of 3 × 105 particles per second. In addition, we analyze a method to estimate the resolution without placing any structure under vacuum, a significant practical improvement. While we use UV photons here, the results of this work apply to the detection of other kinds of particles.

Four-year measurement of methane flux over a temperate forest with a relaxed eddy accumulation method

Science.gov (United States)

Sakabe, A.; Kosugi, Y.; Ueyama, M.; Hamotani, K.; Takahashi, K.; Iwata, H.; Itoh, M.

2013-12-01

Forests are generally assumed to be an atmospheric methane (CH4) sink (Le Mer and Roger, 2001). However, under Asian monsoon climate, forests are subject to wide spatiotemporal range in soil water status, where forest soils often became water-saturated condition heterogeneously. In such warm and humid conditions, forests may act as a CH4 source and/or sink with considerable spatiotemporal variations. Micrometeorological methods such as eddy covariance (EC) method continuously measure spatially-representative flux at a canopy scale without artificial disturbance. In this study, we measured CH4 fluxes over a temperate forest during four-year period using a CH4 analyzer based on tunable diode laser spectroscopy detection with a relaxed eddy accumulation (REA) method (Hamotani et al., 1996, 2001). We revealed the amplitude and seasonal variations of canopy-scale CH4 fluxes. The REA method is the attractive alternative to the EC method to measure trace-gas flux because it allows the use of analyzers with an optimal integration time. We also conducted continuous chamber measurements on forest floor to reveal spatial variations in soil CH4 fluxes and its controlling processes. The observations were made in an evergreen coniferous forest in central Japan. The site has a warm temperate monsoon climate with wet summer. Some wetlands were located in riparian zones along streams within the flux footprint area. For the REA method, the sonic anemometer (SAT-550, Kaijo) was mounted on top of the 29-m-tall tower and air was sampled from just below the sonic anemometer to reservoirs according to the direction of vertical wind velocity (w). After accumulating air for 30 minutes, the air in the reservoirs was pulled into a CO2/H2O gas analyzer (LI-840, Li-Cor) and a CH4 analyzer (FMA-200, Los Gatos Research). Before entering the analyzers, the sampled air was dried using a gas dryer (PD-50 T-48; Perma Pure Inc.). The REA flux is obtained from the difference in the mean concentrations

DEBRIS FLOW ACTIVITY RECONSTRUCTION USING DENDROGEOMORPHOLOGICAL METHODS. STUDY CASE (PIULE IORGOVANU MOUNTAINS

Directory of Open Access Journals (Sweden)

ROXANA VĂIDEAN

2015-10-01

Full Text Available Debris Flow Activity Reconstruction Using Dendrogeomorphological Methods. Study Case (Piule Iorgovanu Mountains. Debris flows are one of the most destructive mass-movements that manifest in the mountainous regions around the world. As they usually occur on the steep slopes of the mountain streams where human settlements are scarce, they are hardly monitored. But when they do interact with builtup areas or transportation corridors they cause enormous damages and even casualties. The rise of human pressure in the hazardous regions has led to an increase in the severity of the negative consequences related to debris flows. Consequently, a complete database for hazard assessment of the areas which show evidence of debris flow activity is needed. Because of the lack of archival records knowledge about their frequency remains poor. One of the most precise methods used in the reconstruction of past debris flow activity are dendrogeomorphological methods. Using growth anomalies of the affected trees, a valuable event chronology can be obtained. Therefore, it is the purpose of this study to reconstruct debris flow activity on a small catchment located on the northern slope of Piule Iorgovanu Mountains. The trees growing near the channel of transport and on the debris fan, exhibit different types of disturbances. A number of 98 increment cores, 19 cross-sections and 1 semi-transversal cross-section was used. Based on the growth anomalies identified in the samples there were reconstructed a number of 19 events spanning a period of almost a century.

In-situ observations of flux ropes formed in association with a pair of spiral nulls in magnetotail plasmas

Energy Technology Data Exchange (ETDEWEB)

Guo, Ruilong; Xie, Lun; He, Jiansen [School of Earth and Space Sciences, Peking University, Beijing 100871 (China); Pu, Zuyin; Fu, Suiyan [School of Earth and Space Sciences, Peking University, Beijing 100871 (China); PKU/UCLA Joint Research Institute in Science and Engineering, Peking University, Beijing (China); Chen, Li-Jen [NASA Goddard Space Flight Center, Greenbelt, Maryland 20771 (United States); Wang, Xiaogang [Harbin Institute of Technology, Harbin 150001 (China); Dunlop, Malcolm [School of Astronautics, Beihang University, Beijing 100191 (China); RAL Space, Rutherford Appleton Laboratory, STFC, Didcot OX11 0QX (United Kingdom); Bogdanova, Yulia V. [RAL Space, Rutherford Appleton Laboratory, STFC, Didcot OX11 0QX (United Kingdom); Yao, Zhonghua; Fazakerley, Andrew N. [UCL Mullard Space Science Laboratory, Dorking RH5 6NT (United Kingdom); Xiao, Chijie [School of Physics, Peking University, Beijing 100871 (China)

2016-05-15

Signatures of secondary islands are frequently observed in the magnetic reconnection regions of magnetotail plasmas. In this paper, magnetic structures with the secondary-island signatures observed by Cluster are reassembled by a fitting-reconstruction method. The results show three-dimensionally that a secondary island event can manifest the flux rope formed with an A{sub s}-type null and a B{sub s}-type null paired via their spines. We call this A{sub s}-spine-B{sub s}-like configuration the helically wrapped spine model. The reconstructed field lines wrap around the spine to form the flux rope, and an O-type topology is therefore seen on the plane perpendicular to the spine. Magnetized electrons are found to rotate on and cross the fan surface, suggesting that both the torsional-spine and the spine-fan reconnection take place in the configuration. Furthermore, detailed analysis implies that the spiral nulls and flux ropes were locally generated nearby the spacecraft in the reconnection outflow region, indicating that secondary reconnection may occur in the exhaust away from the primary reconnection site.

In-situ observations of flux ropes formed in association with a pair of spiral nulls in magnetotail plasmas

International Nuclear Information System (INIS)

Guo, Ruilong; Xie, Lun; He, Jiansen; Pu, Zuyin; Fu, Suiyan; Chen, Li-Jen; Wang, Xiaogang; Dunlop, Malcolm; Bogdanova, Yulia V.; Yao, Zhonghua; Fazakerley, Andrew N.; Xiao, Chijie

2016-01-01

Signatures of secondary islands are frequently observed in the magnetic reconnection regions of magnetotail plasmas. In this paper, magnetic structures with the secondary-island signatures observed by Cluster are reassembled by a fitting-reconstruction method. The results show three-dimensionally that a secondary island event can manifest the flux rope formed with an A_s-type null and a B_s-type null paired via their spines. We call this A_s-spine-B_s-like configuration the helically wrapped spine model. The reconstructed field lines wrap around the spine to form the flux rope, and an O-type topology is therefore seen on the plane perpendicular to the spine. Magnetized electrons are found to rotate on and cross the fan surface, suggesting that both the torsional-spine and the spine-fan reconnection take place in the configuration. Furthermore, detailed analysis implies that the spiral nulls and flux ropes were locally generated nearby the spacecraft in the reconnection outflow region, indicating that secondary reconnection may occur in the exhaust away from the primary reconnection site.

An interior-point method for total variation regularized positron emission tomography image reconstruction

Science.gov (United States)

Bai, Bing

2012-03-01

There has been a lot of work on total variation (TV) regularized tomographic image reconstruction recently. Many of them use gradient-based optimization algorithms with a differentiable approximation of the TV functional. In this paper we apply TV regularization in Positron Emission Tomography (PET) image reconstruction. We reconstruct the PET image in a Bayesian framework, using Poisson noise model and TV prior functional. The original optimization problem is transformed to an equivalent problem with inequality constraints by adding auxiliary variables. Then we use an interior point method with logarithmic barrier functions to solve the constrained optimization problem. In this method, a series of points approaching the solution from inside the feasible region are found by solving a sequence of subproblems characterized by an increasing positive parameter. We use preconditioned conjugate gradient (PCG) algorithm to solve the subproblems directly. The nonnegativity constraint is enforced by bend line search. The exact expression of the TV functional is used in our calculations. Simulation results show that the algorithm converges fast and the convergence is insensitive to the values of the regularization and reconstruction parameters.

Muon reconstruction in the Daya Bay water pools

International Nuclear Information System (INIS)

Hackenburg, R. W.

2017-01-01

Muon reconstruction in the Daya Bay water pools would serve to verify the simulated muon fluxes and offer the possibility of studying cosmic muons in general. This reconstruction is, however, complicated by many optical obstacles and the small coverage of photomultiplier tubes (PMTs) as compared to other large water Cherenkov detectors. The PMTs’ timing information is useful only in the case of direct, unreflected Cherenkov light. This requires PMTs to be added and removed as an hypothesized muon trajectory is iteratively improved, to account for the changing effects of obstacles and direction of light. Therefore, muon reconstruction in the Daya Bay water pools does not lend itself to a general fitting procedure employing smoothly varying functions with continuous derivatives. Here, we describe an algorithm which overcomes these complications. It employs the method of Least Mean Squares to determine an hypothesized trajectory from the PMTs’ charge-weighted positions. This initially hypothesized trajectory is then iteratively refined using the PMTs’ timing information. Reconstructions with simulated data reproduce the simulated trajectory to within about 5° in direction and about 45 cm in position at the pool surface, with a bias that tends to pull tracks away from the vertical by about 3°.

Restoration of the analytically reconstructed OpenPET images by the method of convex projections

Energy Technology Data Exchange (ETDEWEB)

Tashima, Hideaki; Murayama, Hideo; Yamaya, Taiga [National Institute of Radiological Sciences, Chiba (Japan); Katsunuma, Takayuki; Suga, Mikio [Chiba Univ. (Japan). Graduate School of Engineering; Kinouchi, Shoko [National Institute of Radiological Sciences, Chiba (Japan); Chiba Univ. (Japan). Graduate School of Engineering; Obi, Takashi [Tokyo Institute of Technology (Japan). Interdisciplinary Graduate School of Science and Engineering; Kudo, Hiroyuki [Tsukuba Univ. (Japan). Graduate School of Systems and Information Engineering

2011-07-01

We have proposed the OpenPET geometry which has gaps between detector rings and physically opened field-of-view. The image reconstruction of the OpenPET is classified into an incomplete problem because it does not satisfy the Orlov's condition. Even so, the simulation and experimental studies have shown that applying iterative methods such as the maximum likelihood expectation maximization (ML-EM) algorithm successfully reconstruct images in the gap area. However, the imaging process of the iterative methods in the OpenPET imaging is not clear. Therefore, the aim of this study is to analytically analyze the OpenPET imaging and estimate implicit constraints involved in the iterative methods. To apply explicit constraints in the OpenPET imaging, we used the method of convex projections for restoration of the images reconstructed by the analytical way in which low-frequency components are lost. Numerical simulations showed that the similar restoration effects are involved both in the ML-EM and the method of convex projections. Therefore, the iterative methods have advantageous effect of restoring lost frequency components of the OpenPET imaging. (orig.)

Development of a three-dimensional computer code for reconstructing power distributions by means of side reflector instrumentation and determination of the capabilities and limitations of this method

International Nuclear Information System (INIS)

Knob, P.J.

1982-07-01

This work is concerned with the detection of flux disturbances in pebble bed high temperature reactors by means of flux measurements in the side reflector. Included among the disturbances studied are xenon oscillations, rod group insertions, and individual rod insertions. Using the three-dimensional diffusion code CITATION, core calculations for both a very small reactor (KAHTER) and a large reactor (PNP-3000) were carried out to determine the neutron fluxes at the detector positions. These flux values were then used in flux mapping codes for reconstructing the flux distribution in the core. As an extension of the already existing two-dimensional MOFA code, which maps azimuthal disturbances, a new three-dimensional flux mapping code ZELT was developed for handling axial disturbances as well. It was found that both flux mapping programs give satisfactory results for small and large pebble bed reactors alike. (orig.) [de

Joint image reconstruction method with correlative multi-channel prior for x-ray spectral computed tomography

Science.gov (United States)

Kazantsev, Daniil; Jørgensen, Jakob S.; Andersen, Martin S.; Lionheart, William R. B.; Lee, Peter D.; Withers, Philip J.

2018-06-01

Rapid developments in photon-counting and energy-discriminating detectors have the potential to provide an additional spectral dimension to conventional x-ray grayscale imaging. Reconstructed spectroscopic tomographic data can be used to distinguish individual materials by characteristic absorption peaks. The acquired energy-binned data, however, suffer from low signal-to-noise ratio, acquisition artifacts, and frequently angular undersampled conditions. New regularized iterative reconstruction methods have the potential to produce higher quality images and since energy channels are mutually correlated it can be advantageous to exploit this additional knowledge. In this paper, we propose a novel method which jointly reconstructs all energy channels while imposing a strong structural correlation. The core of the proposed algorithm is to employ a variational framework of parallel level sets to encourage joint smoothing directions. In particular, the method selects reference channels from which to propagate structure in an adaptive and stochastic way while preferring channels with a high data signal-to-noise ratio. The method is compared with current state-of-the-art multi-channel reconstruction techniques including channel-wise total variation and correlative total nuclear variation regularization. Realistic simulation experiments demonstrate the performance improvements achievable by using correlative regularization methods.

Benchmark calculations of power distribution within fuel assemblies. Phase 2: comparison of data reduction and power reconstruction methods in production codes

International Nuclear Information System (INIS)

2000-01-01

Systems loaded with plutonium in the form of mixed-oxide (MOX) fuel show somewhat different neutronic characteristics compared with those using conventional uranium fuels. In order to maintain adequate safety standards, it is essential to accurately predict the characteristics of MOX-fuelled systems and to further validate both the nuclear data and the computation methods used. A computation benchmark on power distribution within fuel assemblies to compare different techniques used in production codes for fine flux prediction in systems partially loaded with MOX fuel was carried out at an international level. It addressed first the numerical schemes for pin power reconstruction, then investigated the global performance including cross-section data reduction methods. This report provides the detailed results of this second phase of the benchmark. The analysis of the results revealed that basic data still need to be improved, primarily for higher plutonium isotopes and minor actinides. (author)

Novel edge treatment method for improving the transmission reconstruction quality in Tomographic Gamma Scanning.

Science.gov (United States)

Han, Miaomiao; Guo, Zhirong; Liu, Haifeng; Li, Qinghua

2018-05-01

Tomographic Gamma Scanning (TGS) is a method used for the nondestructive assay of radioactive wastes. In TGS, the actual irregular edge voxels are regarded as regular cubic voxels in the traditional treatment method. In this study, in order to improve the performance of TGS, a novel edge treatment method is proposed that considers the actual shapes of these voxels. The two different edge voxel treatment methods were compared by computing the pixel-level relative errors and normalized mean square errors (NMSEs) between the reconstructed transmission images and the ideal images. Both methods were coupled with two different interative algorithms comprising Algebraic Reconstruction Technique (ART) with a non-negativity constraint and Maximum Likelihood Expectation Maximization (MLEM). The results demonstrated that the traditional method for edge voxel treatment can introduce significant error and that the real irregular edge voxel treatment method can improve the performance of TGS by obtaining better transmission reconstruction images. With the real irregular edge voxel treatment method, MLEM algorithm and ART algorithm can be comparable when assaying homogenous matrices, but MLEM algorithm is superior to ART algorithm when assaying heterogeneous matrices. Copyright © 2018 Elsevier Ltd. All rights reserved.

Software Architecture Reconstruction Method, a Survey

OpenAIRE

Zainab Nayyar; Nazish Rafique

2014-01-01

Architecture reconstruction belongs to a reverse engineering process, in which we move from code to architecture level for reconstructing architecture. Software architectures are the blue prints of projects which depict the external overview of the software system. Mostly maintenance and testing cause the software to deviate from its original architecture, because sometimes for enhancing the functionality of a system the software deviates from its documented specifications, some new modules a...

Method of incident low-energy gamma-ray direction reconstruction in the GAMMA-400 gamma-ray space telescope

International Nuclear Information System (INIS)

Kheymits, M D; Leonov, A A; Zverev, V G; Galper, A M; Arkhangelskaya, I V; Arkhangelskiy, A I; Yurkin, Yu T; Bakaldin, A V; Suchkov, S I; Topchiev, N P; Dalkarov, O D

2016-01-01

The GAMMA-400 gamma-ray space-based telescope has as its main goals to measure cosmic γ-ray fluxes and the electron-positron cosmic-ray component produced, theoretically, in dark-matter-particles decay or annihilation processes, to search for discrete γ-ray sources and study them in detail, to examine the energy spectra of diffuse γ-rays — both galactic and extragalactic — and to study gamma-ray bursts (GRBs) and γ-rays from the active Sun. Scientific goals of GAMMA-400 telescope require fine angular resolution. The telescope is of a pair-production type. In the converter-tracker, the incident gamma-ray photon converts into electron-positron pair in the tungsten layer and then the tracks are detected by silicon- strip position-sensitive detectors. Multiple scattering processes become a significant obstacle in the incident-gamma direction reconstruction for energies below several gigaelectronvolts. The method of utilising this process to improve the resolution is proposed in the presented work. (paper)

Online In-Core Thermal Neutron Flux Measurement for the Validation of Computational Methods

International Nuclear Information System (INIS)

Mohamad Hairie Rabir; Muhammad Rawi Mohamed Zin; Yahya Ismail

2016-01-01

In order to verify and validate the computational methods for neutron flux calculation in RTP calculations, a series of thermal neutron flux measurement has been performed. The Self Powered Neutron Detector (SPND) was used to measure thermal neutron flux to verify the calculated neutron flux distribution in the TRIGA reactor. Measurements results obtained online for different power level of the reactor. The experimental results were compared to the calculations performed with Monte Carlo code MCNP using detailed geometrical model of the reactor. The calculated and measured thermal neutron flux in the core are in very good agreement indicating that the material and geometrical properties of the reactor core are modelled well. In conclusion one can state that our computational model describes very well the neutron flux distribution in the reactor core. Since the computational model properly describes the reactor core it can be used for calculations of reactor core parameters and for optimization of RTP utilization. (author)

A continuous surface reconstruction method on point cloud captured from a 3D surface photogrammetry system

Energy Technology Data Exchange (ETDEWEB)

Liu, Wenyang [Department of Bioengineering, University of California, Los Angeles, California 90095 (United States); Cheung, Yam; Sabouri, Pouya; Arai, Tatsuya J.; Sawant, Amit [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas 75390 (United States); Ruan, Dan, E-mail: druan@mednet.ucla.edu [Department of Bioengineering, University of California, Los Angeles, California 90095 and Department of Radiation Oncology, University of California, Los Angeles, California 90095 (United States)

2015-11-15

Purpose: To accurately and efficiently reconstruct a continuous surface from noisy point clouds captured by a surface photogrammetry system (VisionRT). Methods: The authors have developed a level-set based surface reconstruction method on point clouds captured by a surface photogrammetry system (VisionRT). The proposed method reconstructs an implicit and continuous representation of the underlying patient surface by optimizing a regularized fitting energy, offering extra robustness to noise and missing measurements. By contrast to explicit/discrete meshing-type schemes, their continuous representation is particularly advantageous for subsequent surface registration and motion tracking by eliminating the need for maintaining explicit point correspondences as in discrete models. The authors solve the proposed method with an efficient narrowband evolving scheme. The authors evaluated the proposed method on both phantom and human subject data with two sets of complementary experiments. In the first set of experiment, the authors generated a series of surfaces each with different black patches placed on one chest phantom. The resulting VisionRT measurements from the patched area had different degree of noise and missing levels, since VisionRT has difficulties in detecting dark surfaces. The authors applied the proposed method to point clouds acquired under these different configurations, and quantitatively evaluated reconstructed surfaces by comparing against a high-quality reference surface with respect to root mean squared error (RMSE). In the second set of experiment, the authors applied their method to 100 clinical point clouds acquired from one human subject. In the absence of ground-truth, the authors qualitatively validated reconstructed surfaces by comparing the local geometry, specifically mean curvature distributions, against that of the surface extracted from a high-quality CT obtained from the same patient. Results: On phantom point clouds, their method

Least-square NUFFT methods applied to 2-D and 3-D radially encoded MR image reconstruction.

Science.gov (United States)

Song, Jiayu; Liu, Yanhui; Gewalt, Sally L; Cofer, Gary; Johnson, G Allan; Liu, Qing Huo

2009-04-01

Radially encoded MRI has gained increasing attention due to its motion insensitivity and reduced artifacts. However, because its samples are collected nonuniformly in the k-space, multidimensional (especially 3-D) radially sampled MRI image reconstruction is challenging. The objective of this paper is to develop a reconstruction technique in high dimensions with on-the-fly kernel calculation. It implements general multidimensional nonuniform fast Fourier transform (NUFFT) algorithms and incorporates them into a k-space image reconstruction framework. The method is then applied to reconstruct from the radially encoded k-space data, although the method is applicable to any non-Cartesian patterns. Performance comparisons are made against the conventional Kaiser-Bessel (KB) gridding method for 2-D and 3-D radially encoded computer-simulated phantoms and physically scanned phantoms. The results show that the NUFFT reconstruction method has better accuracy-efficiency tradeoff than the KB gridding method when the kernel weights are calculated on the fly. It is found that for a particular conventional kernel function, using its corresponding deapodization function as a scaling factor in the NUFFT framework has the potential to improve accuracy. In particular, when a cosine scaling factor is used, the NUFFT method is faster than KB gridding method since a closed-form solution is available and is less computationally expensive than the KB kernel (KB griding requires computation of Bessel functions). The NUFFT method has been successfully applied to 2-D and 3-D in vivo studies on small animals.

Methods of reconstruction of multi-particle events in the new coordinate-tracking setup

Science.gov (United States)

Vorobyev, V. S.; Shutenko, V. V.; Zadeba, E. A.

2018-01-01

At the Unique Scientific Facility NEVOD (MEPhI), a large coordinate-tracking detector based on drift chambers for investigations of muon bundles generated by ultrahigh energy primary cosmic rays is being developed. One of the main characteristics of the bundle is muon multiplicity. Three methods of reconstruction of multiple events were investigated: the sequential search method, method of finding the straight line and method of histograms. The last method determines the number of tracks with the same zenith angle in the event. It is most suitable for the determination of muon multiplicity: because of a large distance to the point of generation of muons, their trajectories are quasiparallel. The paper presents results of application of three reconstruction methods to data from the experiment, and also first results of the detector operation.

Robust method for stator current reconstruction from DC link in a ...

African Journals Online (AJOL)

Using the switching signals and dc link current, this paper presents a new algorithm for the reconstruction of stator currents of an inverter-fed, three-phase induction motor drive. Unlike the classical and improved methods available in literature, the proposed method is neither based on pulse width modulation pattern ...

A Lightweight Surface Reconstruction Method for Online 3D Scanning Point Cloud Data Oriented toward 3D Printing

Directory of Open Access Journals (Sweden)

Buyun Sheng

2018-01-01

Full Text Available The existing surface reconstruction algorithms currently reconstruct large amounts of mesh data. Consequently, many of these algorithms cannot meet the efficiency requirements of real-time data transmission in a web environment. This paper proposes a lightweight surface reconstruction method for online 3D scanned point cloud data oriented toward 3D printing. The proposed online lightweight surface reconstruction algorithm is composed of a point cloud update algorithm (PCU, a rapid iterative closest point algorithm (RICP, and an improved Poisson surface reconstruction algorithm (IPSR. The generated lightweight point cloud data are pretreated using an updating and rapid registration method. The Poisson surface reconstruction is also accomplished by a pretreatment to recompute the point cloud normal vectors; this approach is based on a least squares method, and the postprocessing of the PDE patch generation was based on biharmonic-like fourth-order PDEs, which effectively reduces the amount of reconstructed mesh data and improves the efficiency of the algorithm. This method was verified using an online personalized customization system that was developed with WebGL and oriented toward 3D printing. The experimental results indicate that this method can generate a lightweight 3D scanning mesh rapidly and efficiently in a web environment.

A Family of Multipoint Flux Mixed Finite Element Methods for Elliptic Problems on General Grids

KAUST Repository

Wheeler, Mary F.

2011-01-01

In this paper, we discuss a family of multipoint flux mixed finite element (MFMFE) methods on simplicial, quadrilateral, hexahedral, and triangular-prismatic grids. The MFMFE methods are locally conservative with continuous normal fluxes, since they are developed within a variational framework as mixed finite element methods with special approximating spaces and quadrature rules. The latter allows for local flux elimination giving a cell-centered system for the scalar variable. We study two versions of the method: with a symmetric quadrature rule on smooth grids and a non-symmetric quadrature rule on rough grids. Theoretical and numerical results demonstrate first order convergence for problems with full-tensor coefficients. Second order superconvergence is observed on smooth grids. © 2011 Published by Elsevier Ltd.

Standard Test Method for Measuring Heat Flux Using Flush-Mounted Insert Temperature-Gradient Gages

CERN Document Server

American Society for Testing and Materials. Philadelphia

2009-01-01

1.1 This test method describes the measurement of the net heat flux normal to a surface using gages inserted flush with the surface. The geometry is the same as heat-flux gages covered by Test Method E 511, but the measurement principle is different. The gages covered by this standard all use a measurement of the temperature gradient normal to the surface to determine the heat that is exchanged to or from the surface. Although in a majority of cases the net heat flux is to the surface, the gages operate by the same principles for heat transfer in either direction. 1.2 This general test method is quite broad in its field of application, size and construction. Two different gage types that are commercially available are described in detail in later sections as examples. A summary of common heat-flux gages is given by Diller (1). Applications include both radiation and convection heat transfer. The gages used for aerospace applications are generally small (0.155 to 1.27 cm diameter), have a fast time response ...

Comparison of methods for measuring flux gradients in type II superconductors

International Nuclear Information System (INIS)

Kroeger, D.M.; Koch, C.C.; Charlesworth, J.P.

1975-01-01

A comparison has been made of four methods of measuring the critical current density J/sub c/ in hysteretic type II superconductors, having a wide range of K and J/sub c/ values, in magnetic fields up to 70 kOe. Two of the methods, (a) resistive measurements and (b) magnetization measurements, were carried out in static magnetic fields. The other two methods involved analysis of the response of the sample to a small alternating field superimposed on the static field. The response was analyzed either (c) by measuring the third-harmonic content or (d) by integration of the waveform to obtain measure of flux penetration. The results are discussed with reference to the agreement between the different techniques and the consistency of the critical state hypothesis on which all these techniques are based. It is concluded that flux-penetration measurements by method (d) provide the most detailed information about J/sub c/ but that one must be wary of minor failures of the critical state hypothesis. Best results are likely to be obtained by using more than one method. (U.S.)

A Method for the neutron flux determination during the activation process

International Nuclear Information System (INIS)

Maayouf, R.M.A.; Khalil, M.I.

2000-01-01

The present work deals with an accurate method for determining the neutron flux coming out from a neutron source during the experimental measurements. Accordingly, a suitable detector, followed by preamplifier and amplifier, is connected to a data acquisition system designed specially for this purpose; and the number of neutrons detected during every sampling period is stored in the PC. The historical file can be used to compute the average or the integral flux during any time period; considering the detector efficiency, geometrical arrangement and the amplification gain

Neutron Flux Interpolation with Finite Element Method in the Nuclear Fuel Cell Calculation using Collision Probability Method

International Nuclear Information System (INIS)

Shafii, M. Ali; Su'ud, Zaki; Waris, Abdul; Kurniasih, Neny; Ariani, Menik; Yulianti, Yanti

2010-01-01

Nuclear reactor design and analysis of next-generation reactors require a comprehensive computing which is better to be executed in a high performance computing. Flat flux (FF) approach is a common approach in solving an integral transport equation with collision probability (CP) method. In fact, the neutron flux distribution is not flat, even though the neutron cross section is assumed to be equal in all regions and the neutron source is uniform throughout the nuclear fuel cell. In non-flat flux (NFF) approach, the distribution of neutrons in each region will be different depending on the desired interpolation model selection. In this study, the linear interpolation using Finite Element Method (FEM) has been carried out to be treated the neutron distribution. The CP method is compatible to solve the neutron transport equation for cylindrical geometry, because the angle integration can be done analytically. Distribution of neutrons in each region of can be explained by the NFF approach with FEM and the calculation results are in a good agreement with the result from the SRAC code. In this study, the effects of the mesh on the k eff and other parameters are investigated.

Method to eliminate flux linkage DC component in load transformer for static transfer switch.

Science.gov (United States)

He, Yu; Mao, Chengxiong; Lu, Jiming; Wang, Dan; Tian, Bing

2014-01-01

Many industrial and commercial sensitive loads are subject to the voltage sags and interruptions. The static transfer switch (STS) based on the thyristors is applied to improve the power quality and reliability. However, the transfer will result in severe inrush current in the load transformer, because of the DC component in the magnetic flux generated in the transfer process. The inrush current which is always 2 ~ 30 p.u. can cause the disoperation of relay protective devices and bring potential damage to the transformer. The way to eliminate the DC component is to transfer the related phases when the residual flux linkage of the load transformer and the prospective flux linkage of the alternate source are equal. This paper analyzes how the flux linkage of each winding in the load transformer changes in the transfer process. Based on the residual flux linkage when the preferred source is completely disconnected, the method to calculate the proper time point to close each phase of the alternate source is developed. Simulation and laboratory experiments results are presented to show the effectiveness of the transfer method.

A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system

Energy Technology Data Exchange (ETDEWEB)

Liu, Wenyang [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 (United States); Cheung, Yam [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas 75390 (United States); Sawant, Amit [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas, 75390 and Department of Radiation Oncology, University of Maryland, College Park, Maryland 20742 (United States); Ruan, Dan, E-mail: druan@mednet.ucla.edu [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 and Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California 90095 (United States)

2016-05-15

Purpose: To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. Methods: The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. Results: On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced

A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system

International Nuclear Information System (INIS)

Liu, Wenyang; Cheung, Yam; Sawant, Amit; Ruan, Dan

2016-01-01

Purpose: To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. Methods: The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. Results: On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced

A continuous surface reconstruction method on point cloud captured from a 3D surface photogrammetry system.

Science.gov (United States)

Liu, Wenyang; Cheung, Yam; Sabouri, Pouya; Arai, Tatsuya J; Sawant, Amit; Ruan, Dan

2015-11-01

To accurately and efficiently reconstruct a continuous surface from noisy point clouds captured by a surface photogrammetry system (VisionRT). The authors have developed a level-set based surface reconstruction method on point clouds captured by a surface photogrammetry system (VisionRT). The proposed method reconstructs an implicit and continuous representation of the underlying patient surface by optimizing a regularized fitting energy, offering extra robustness to noise and missing measurements. By contrast to explicit/discrete meshing-type schemes, their continuous representation is particularly advantageous for subsequent surface registration and motion tracking by eliminating the need for maintaining explicit point correspondences as in discrete models. The authors solve the proposed method with an efficient narrowband evolving scheme. The authors evaluated the proposed method on both phantom and human subject data with two sets of complementary experiments. In the first set of experiment, the authors generated a series of surfaces each with different black patches placed on one chest phantom. The resulting VisionRT measurements from the patched area had different degree of noise and missing levels, since VisionRT has difficulties in detecting dark surfaces. The authors applied the proposed method to point clouds acquired under these different configurations, and quantitatively evaluated reconstructed surfaces by comparing against a high-quality reference surface with respect to root mean squared error (RMSE). In the second set of experiment, the authors applied their method to 100 clinical point clouds acquired from one human subject. In the absence of ground-truth, the authors qualitatively validated reconstructed surfaces by comparing the local geometry, specifically mean curvature distributions, against that of the surface extracted from a high-quality CT obtained from the same patient. On phantom point clouds, their method achieved submillimeter

Segmentation-DrivenTomographic Reconstruction

DEFF Research Database (Denmark)

Kongskov, Rasmus Dalgas

such that the segmentation subsequently can be carried out by use of a simple segmentation method, for instance just a thresholding method. We tested the advantages of going from a two-stage reconstruction method to a one stage segmentation-driven reconstruction method for the phase contrast tomography reconstruction......The tomographic reconstruction problem is concerned with creating a model of the interior of an object from some measured data, typically projections of the object. After reconstructing an object it is often desired to segment it, either automatically or manually. For computed tomography (CT...

A penalized linear and nonlinear combined conjugate gradient method for the reconstruction of fluorescence molecular tomography.

Science.gov (United States)

Shang, Shang; Bai, Jing; Song, Xiaolei; Wang, Hongkai; Lau, Jaclyn

2007-01-01

Conjugate gradient method is verified to be efficient for nonlinear optimization problems of large-dimension data. In this paper, a penalized linear and nonlinear combined conjugate gradient method for the reconstruction of fluorescence molecular tomography (FMT) is presented. The algorithm combines the linear conjugate gradient method and the nonlinear conjugate gradient method together based on a restart strategy, in order to take advantage of the two kinds of conjugate gradient methods and compensate for the disadvantages. A quadratic penalty method is adopted to gain a nonnegative constraint and reduce the illposedness of the problem. Simulation studies show that the presented algorithm is accurate, stable, and fast. It has a better performance than the conventional conjugate gradient-based reconstruction algorithms. It offers an effective approach to reconstruct fluorochrome information for FMT.

Development of Coincidence Method for Determination Thermal Neutron Flux on RSG-GAS

International Nuclear Information System (INIS)

Bakhri, Syaiful; Hamzah, Amir

2004-01-01

The research to develop detection radiation system using coincidence method has been done to determine thermal neutron flux in RS1 and RS2 irradiation facilities RSG-GAS. At this research has arranged beta-gamma coincidence equipment system and parameter of measurement according to Au-198 beta-gamma spectrum. Gold foils that have irradiated for period of time, counted, and the activities of radiation is analyzed to get neutron flux. Result of research indicate that systems measurement of absolute activity with gamma beta coincidence method functioning well and can be applied at activity measurement of gold foil for irradiation facility characterization. The results show that thermal neutron flux in RS1 and RS2, respectively is 2.007E+12 n/cm 2 s and 2.147E+12 n/cm 2 s. To examine the system performance, the result was compared to measure activity using high resolution of Hp Ge detector and achieved discrepancy is about 1.26% and 6.70%. (author)

MO-DE-209-02: Tomosynthesis Reconstruction Methods

International Nuclear Information System (INIS)

Mainprize, J.

2016-01-01

Digital Breast Tomosynthesis (DBT) is rapidly replacing mammography as the standard of care in breast cancer screening and diagnosis. DBT is a form of computed tomography, in which a limited set of projection images are acquired over a small angular range and reconstructed into tomographic data. The angular range varies from 15° to 50° and the number of projections varies between 9 and 25 projections, as determined by the equipment manufacturer. It is equally valid to treat DBT as the digital analog of classical tomography – that is, linear tomography. In fact, the name “tomosynthesis” stands for “synthetic tomography.” DBT shares many common features with classical tomography, including the radiographic appearance, dose, and image quality considerations. As such, both the science and practical physics of DBT systems is a hybrid between computed tomography and classical tomographic methods. In this lecture, we will explore the continuum from radiography to computed tomography to illustrate the characteristics of DBT. This lecture will consist of four presentations that will provide a complete overview of DBT, including a review of the fundamentals of DBT acquisition, a discussion of DBT reconstruction methods, an overview of dosimetry for DBT systems, and summary of the underlying image theory of DBT thereby relating image quality and dose. Learning Objectives: To understand the fundamental principles behind tomosynthesis image acquisition. To understand the fundamentals of tomosynthesis image reconstruction. To learn the determinants of image quality and dose in DBT, including measurement techniques. To learn the image theory underlying tomosynthesis, and the relationship between dose and image quality. ADM is a consultant to, and holds stock in, Real Time Tomography, LLC. ADM receives research support from Hologic Inc., Analogic Inc., and Barco NV.; ADM is a member of the Scientific Advisory Board for Gamma Medica Inc.; A. Maidment, Research Support

MO-DE-209-02: Tomosynthesis Reconstruction Methods

Energy Technology Data Exchange (ETDEWEB)

Mainprize, J. [Sunnybrook Health Sciences Centre, Toronto, ON (Canada)

2016-06-15

Digital Breast Tomosynthesis (DBT) is rapidly replacing mammography as the standard of care in breast cancer screening and diagnosis. DBT is a form of computed tomography, in which a limited set of projection images are acquired over a small angular range and reconstructed into tomographic data. The angular range varies from 15° to 50° and the number of projections varies between 9 and 25 projections, as determined by the equipment manufacturer. It is equally valid to treat DBT as the digital analog of classical tomography – that is, linear tomography. In fact, the name “tomosynthesis” stands for “synthetic tomography.” DBT shares many common features with classical tomography, including the radiographic appearance, dose, and image quality considerations. As such, both the science and practical physics of DBT systems is a hybrid between computed tomography and classical tomographic methods. In this lecture, we will explore the continuum from radiography to computed tomography to illustrate the characteristics of DBT. This lecture will consist of four presentations that will provide a complete overview of DBT, including a review of the fundamentals of DBT acquisition, a discussion of DBT reconstruction methods, an overview of dosimetry for DBT systems, and summary of the underlying image theory of DBT thereby relating image quality and dose. Learning Objectives: To understand the fundamental principles behind tomosynthesis image acquisition. To understand the fundamentals of tomosynthesis image reconstruction. To learn the determinants of image quality and dose in DBT, including measurement techniques. To learn the image theory underlying tomosynthesis, and the relationship between dose and image quality. ADM is a consultant to, and holds stock in, Real Time Tomography, LLC. ADM receives research support from Hologic Inc., Analogic Inc., and Barco NV.; ADM is a member of the Scientific Advisory Board for Gamma Medica Inc.; A. Maidment, Research Support

An assessment of particle filtering methods and nudging for climate state reconstructions

NARCIS (Netherlands)

S. Dubinkina (Svetlana); H. Goosse

2013-01-01

htmlabstractUsing the climate model of intermediate complexity LOVECLIM in an idealized framework, we assess three data-assimilation methods for reconstructing the climate state. The methods are a nudging, a particle filter with sequential importance resampling, and a nudging proposal particle

Impact of reconstruction methods and pathological factors on survival after pancreaticoduodenectomy

Directory of Open Access Journals (Sweden)

Salah Binziad

2013-01-01

Full Text Available Background: Surgery remains the mainstay of therapy for pancreatic head (PH and periampullary carcinoma (PC and provides the only chance of cure. Improvements of surgical technique, increased surgical experience and advances in anesthesia, intensive care and parenteral nutrition have substantially decreased surgical complications and increased survival. We evaluate the effects of reconstruction type, complications and pathological factors on survival and quality of life. Materials and Methods: This is a prospective study to evaluate the impact of various reconstruction methods of the pancreatic remnant after pancreaticoduodenectomy and the pathological characteristics of PC patients over 3.5 years. Patient characteristics and descriptive analysis in the three variable methods either with or without stent were compared with Chi-square test. Multivariate analysis was performed with the logistic regression analysis test and multinomial logistic regression analysis test. Survival rate was analyzed by use Kaplan-Meier test. Results: Forty-one consecutive patients with PC were enrolled. There were 23 men (56.1% and 18 women (43.9%, with a median age of 56 years (16 to 70 years. There were 24 cases of PH cancer, eight cases of PC, four cases of distal CBD cancer and five cases of duodenal carcinoma. Nine patients underwent duct-to-mucosa pancreatico jejunostomy (PJ, 17 patients underwent telescoping pancreatico jejunostomy (PJ and 15 patients pancreaticogastrostomy (PG. The pancreatic duct was stented in 30 patients while in 11 patients, the duct was not stented. The PJ duct-to-mucosa caused significantly less leakage, but longer operative and reconstructive times. Telescoping PJ was associated with the shortest hospital stay. There were 5 postoperative mortalities, while postoperative morbidities included pancreatic fistula-6 patients, delayed gastric emptying in-11, GI fistula-3, wound infection-12, burst abdomen-6 and pulmonary infection-2. Factors

Edge-promoting reconstruction of absorption and diffusivity in optical tomography

International Nuclear Information System (INIS)

Hannukainen, A; Hyvönen, N; Majander, H; Harhanen, L

2016-01-01

In optical tomography a physical body is illuminated with near-infrared light and the resulting outward photon flux is measured at the object boundary. The goal is to reconstruct internal optical properties of the body, such as absorption and diffusivity. In this work, it is assumed that the imaged object is composed of an approximately homogeneous background with clearly distinguishable embedded inhomogeneities. An algorithm for finding the maximum a posteriori estimate for the absorption and diffusion coefficients is introduced assuming an edge-preferring prior and an additive Gaussian measurement noise model. The method is based on iteratively combining a lagged diffusivity step and a linearization of the measurement model of diffuse optical tomography with priorconditioned LSQR. The performance of the reconstruction technique is tested via three-dimensional numerical experiments with simulated data. (paper)

A multigrid Newton-Krylov method for flux-limited radiation diffusion

International Nuclear Information System (INIS)

Rider, W.J.; Knoll, D.A.; Olson, G.L.

1998-01-01

The authors focus on the integration of radiation diffusion including flux-limited diffusion coefficients. The nonlinear integration is accomplished with a Newton-Krylov method preconditioned with a multigrid Picard linearization of the governing equations. They investigate the efficiency of the linear and nonlinear iterative techniques

Color quality improvement of reconstructed images in color digital holography using speckle method and spectral estimation

Science.gov (United States)

Funamizu, Hideki; Onodera, Yusei; Aizu, Yoshihisa

2018-05-01

In this study, we report color quality improvement of reconstructed images in color digital holography using the speckle method and the spectral estimation. In this technique, an object is illuminated by a speckle field and then an object wave is produced, while a plane wave is used as a reference wave. For three wavelengths, the interference patterns of two coherent waves are recorded as digital holograms on an image sensor. Speckle fields are changed by moving a ground glass plate in an in-plane direction, and a number of holograms are acquired to average the reconstructed images. After the averaging process of images reconstructed from multiple holograms, we use the Wiener estimation method for obtaining spectral transmittance curves in reconstructed images. The color reproducibility in this method is demonstrated and evaluated using a Macbeth color chart film and staining cells of onion.

Evaluation of interpolation methods for surface-based motion compensated tomographic reconstruction for cardiac angiographic C-arm data

International Nuclear Information System (INIS)

Müller, Kerstin; Schwemmer, Chris; Hornegger, Joachim; Zheng Yefeng; Wang Yang; Lauritsch, Günter; Rohkohl, Christopher; Maier, Andreas K.; Schultz, Carl; Fahrig, Rebecca

2013-01-01

Purpose: For interventional cardiac procedures, anatomical and functional information about the cardiac chambers is of major interest. With the technology of angiographic C-arm systems it is possible to reconstruct intraprocedural three-dimensional (3D) images from 2D rotational angiographic projection data (C-arm CT). However, 3D reconstruction of a dynamic object is a fundamental problem in C-arm CT reconstruction. The 2D projections are acquired over a scan time of several seconds, thus the projection data show different states of the heart. A standard FDK reconstruction algorithm would use all acquired data for a filtered backprojection and result in a motion-blurred image. In this approach, a motion compensated reconstruction algorithm requiring knowledge of the 3D heart motion is used. The motion is estimated from a previously presented 3D dynamic surface model. This dynamic surface model results in a sparse motion vector field (MVF) defined at control points. In order to perform a motion compensated reconstruction, a dense motion vector field is required. The dense MVF is generated by interpolation of the sparse MVF. Therefore, the influence of different motion interpolation methods on the reconstructed image quality is evaluated. Methods: Four different interpolation methods, thin-plate splines (TPS), Shepard's method, a smoothed weighting function, and a simple averaging, were evaluated. The reconstruction quality was measured on phantom data, a porcine model as well as on in vivo clinical data sets. As a quality index, the 2D overlap of the forward projected motion compensated reconstructed ventricle and the segmented 2D ventricle blood pool was quantitatively measured with the Dice similarity coefficient and the mean deviation between extracted ventricle contours. For the phantom data set, the normalized root mean square error (nRMSE) and the universal quality index (UQI) were also evaluated in 3D image space. Results: The quantitative evaluation of all

Improving automated 3D reconstruction methods via vision metrology

Science.gov (United States)

Toschi, Isabella; Nocerino, Erica; Hess, Mona; Menna, Fabio; Sargeant, Ben; MacDonald, Lindsay; Remondino, Fabio; Robson, Stuart

2015-05-01

This paper aims to provide a procedure for improving automated 3D reconstruction methods via vision metrology. The 3D reconstruction problem is generally addressed using two different approaches. On the one hand, vision metrology (VM) systems try to accurately derive 3D coordinates of few sparse object points for industrial measurement and inspection applications; on the other, recent dense image matching (DIM) algorithms are designed to produce dense point clouds for surface representations and analyses. This paper strives to demonstrate a step towards narrowing the gap between traditional VM and DIM approaches. Efforts are therefore intended to (i) test the metric performance of the automated photogrammetric 3D reconstruction procedure, (ii) enhance the accuracy of the final results and (iii) obtain statistical indicators of the quality achieved in the orientation step. VM tools are exploited to integrate their main functionalities (centroid measurement, photogrammetric network adjustment, precision assessment, etc.) into the pipeline of 3D dense reconstruction. Finally, geometric analyses and accuracy evaluations are performed on the raw output of the matching (i.e. the point clouds) by adopting a metrological approach. The latter is based on the use of known geometric shapes and quality parameters derived from VDI/VDE guidelines. Tests are carried out by imaging the calibrated Portable Metric Test Object, designed and built at University College London (UCL), UK. It allows assessment of the performance of the image orientation and matching procedures within a typical industrial scenario, characterised by poor texture and known 3D/2D shapes.

Neural network CT image reconstruction method for small amount of projection data

International Nuclear Information System (INIS)

Ma, X.F.; Fukuhara, M.; Takeda, T.

2000-01-01

This paper presents a new method for two-dimensional image reconstruction by using a multi-layer neural network. Though a conventionally used object function of such a neural network is composed of a sum of squared errors of the output data, we define an object function composed of a sum of squared residuals of an integral equation. By employing an appropriate numerical line integral for this integral equation, we can construct a neural network which can be used for CT image reconstruction for cases with small amount of projection data. We applied this method to some model problems and obtained satisfactory results. This method is especially useful for analyses of laboratory experiments or field observations where only a small amount of projection data is available in comparison with the well-developed medical applications

Neural network CT image reconstruction method for small amount of projection data

CERN Document Server

Ma, X F; Takeda, T

2000-01-01

This paper presents a new method for two-dimensional image reconstruction by using a multi-layer neural network. Though a conventionally used object function of such a neural network is composed of a sum of squared errors of the output data, we define an object function composed of a sum of squared residuals of an integral equation. By employing an appropriate numerical line integral for this integral equation, we can construct a neural network which can be used for CT image reconstruction for cases with small amount of projection data. We applied this method to some model problems and obtained satisfactory results. This method is especially useful for analyses of laboratory experiments or field observations where only a small amount of projection data is available in comparison with the well-developed medical applications.

Direct fourier method reconstruction based on unequally spaced fast fourier transform

International Nuclear Information System (INIS)

Wu Xiaofeng; Zhao Ming; Liu Li

2003-01-01

First, We give an Unequally Spaced Fast Fourier Transform (USFFT) method, which is more exact and theoretically more comprehensible than its former counterpart. Then, with an interesting interpolation scheme, we discusse how to apply USFFT to Direct Fourier Method (DFM) reconstruction of parallel projection data. At last, an emulation experiment result is given. (authors)

Assessment of Reynolds stresses tensor reconstruction methods for synthetic turbulent inflow conditions. Application to hybrid RANS/LES methods

International Nuclear Information System (INIS)

Laraufie, Romain; Deck, Sébastien

2013-01-01

Highlights: • Present various Reynolds stresses reconstruction methods from a RANS-SA flow field. • Quantify the accuracy of the reconstruction methods for a wide range of Reynolds. • Evaluate the capabilities of the overall process (Reconstruction + SEM). • Provide practical guidelines to realize a streamwise RANS/LES (or WMLES) transition. -- Abstract: Hybrid or zonal RANS/LES approaches are recognized as the most promising way to accurately simulate complex unsteady flows under current computational limitations. One still open issue concerns the transition from a RANS to a LES or WMLES resolution in the stream-wise direction, when near wall turbulence is involved. Turbulence content has then to be prescribed at the transition to prevent from turbulence decay leading to possible flow relaminarization. The present paper aims to propose an efficient way to generate this switch, within the flow, based on a synthetic turbulence inflow condition, named Synthetic Eddy Method (SEM). As the knowledge of the whole Reynolds stresses is often missing, the scope of this paper is focused on generating the quantities required at the SEM inlet from a RANS calculation, namely the first and second order statistics of the aerodynamic field. Three different methods based on two different approaches are presented and their capability to accurately generate the needed aerodynamic values is investigated. Then, the ability of the combination SEM + Reconstruction method to manufacture well-behaved turbulence is demonstrated through spatially developing flat plate turbulent boundary layers. In the mean time, important intrinsic features of the Synthetic Eddy method are pointed out. The necessity of introducing, within the SEM, accurate data, with regards to the outer part of the boundary layer, is illustrated. Finally, user’s guidelines are given depending on the Reynolds number based on the momentum thickness, since one method is suitable for low Reynolds number while the

A three-step reconstruction method for fluorescence molecular tomography based on compressive sensing

DEFF Research Database (Denmark)

Zhu, Yansong; Jha, Abhinav K.; Dreyer, Jakob K.

2017-01-01

Fluorescence molecular tomography (FMT) is a promising tool for real time in vivo quantification of neurotransmission (NT) as we pursue in our BRAIN initiative effort. However, the acquired image data are noisy and the reconstruction problem is ill-posed. Further, while spatial sparsity of the NT...... matrix coherence. The resultant image data are input to a homotopy-based reconstruction strategy that exploits sparsity via ℓ1 regularization. The reconstructed image is then input to a maximum-likelihood expectation maximization (MLEM) algorithm that retains the sparseness of the input estimate...... and improves upon the quantitation by accurate Poisson noise modeling. The proposed reconstruction method was evaluated in a three-dimensional simulated setup with fluorescent sources in a cuboidal scattering medium with optical properties simulating human brain cortex (reduced scattering coefficient: 9.2 cm-1...

On the analytical solution of the SN equation in a rectangle assuming an exponential exiting angular flux boundary

International Nuclear Information System (INIS)

Goncalez, Tifani T.; Segatto, Cynthia F.; Vilhena, Marco Tullio

2011-01-01

In this work, we report an analytical solution for the set of S N equations for the angular flux, in a rectangle, using the double Laplace transform technique. Its main idea comprehends the steps: application of the Laplace transform in one space variable, solution of the resulting equation by the LTS N method and reconstruction of the double Laplace transformed angular flux using the inversion theorem of the Laplace transform. We must emphasize that we perform the Laplace inversion by the LTS N method in the x direction, meanwhile we evaluate the inversion in the y direction performing the calculation of the corresponding line integral solution by the Stefest method. We have also to figure out that the application of Laplace transform to this type of boundary value problem introduces additional unknown functions associated to the partial derivatives of the angular flux at boundary. Based on the good results attained by the nodal LTS N method, we assume that the angular flux at boundary is also approximated by an exponential function. By analytical we mean that no approximation is done along the solution derivation except for the exponential hypothesis for the exiting angular flux at boundary. For sake of completeness, we report numerical comparisons of the obtained results against the ones of the literature. (author)

A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system.

Science.gov (United States)

Liu, Wenyang; Cheung, Yam; Sawant, Amit; Ruan, Dan

2016-05-01

To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced occlusions. The authors have

Improved collision probability method for thermal-neutron-flux calculation in a cylindrical reactor cell

International Nuclear Information System (INIS)

Bosevski, T.

1986-01-01

An improved collision probability method for thermal-neutron-flux calculation in a cylindrical reactor cell has been developed. Expanding the neutron flux and source into a series of even powers of the radius, one' gets a convenient method for integration of the one-energy group integral transport equation. It is shown that it is possible to perform an analytical integration in the x-y plane in one variable and to use the effective Gaussian integration over another one. Choosing a convenient distribution of space points in fuel and moderator the transport matrix calculation and cell reaction rate integration were condensed. On the basis of the proposed method, the computer program DISKRET for the ZUSE-Z 23 K computer has been written. The suitability of the proposed method for the calculation of the thermal-neutron-flux distribution in a reactor cell can be seen from the test results obtained. Compared with the other collision probability methods, the proposed treatment excels with a mathematical simplicity and a faster convergence. (author)

A new method for simultaneous measurement of convective and radiative heat flux in car underhood applications

International Nuclear Information System (INIS)

Khaled, M; Garnier, B; Peerhossaini, H; Harambat, F

2010-01-01

A new experimental technique is presented that allows simultaneous measurement of convective and radiative heat flux in the underhood. The goal is to devise an easily implemented and accurate experimental method for application in the vehicle underhood compartment. The new method is based on a technique for heat-flux measurement developed by the authors (Heat flow (flux) sensors for measurement of convection, conduction and radiation heat flow 27036-2, © Rhopoint Components Ltd, Hurst Green, Oxted, RH8 9AX, UK) that uses several thermocouples in the thickness of a thermal resistive layer (foil heat-flux sensor). The method proposed here uses a pair of these thermocouples with different radiative properties. Measurements validating this novel technique are carried out on a flat plate with a prescribed constant temperature in both natural- and forced-convection flow regimes. The test flat plate is instrumented by this new technique, and also with a different technique that is intrusive but very accurate, used as reference here (Bardon J P and Jarny Y 1994 Procédé et dispositif de mesure transitoire de température et flux surfacique Brevet n°94.011996, 22 February). Discrepancies between the measurements by the two techniques are less than 10% for both convective and radiative heat flux. Error identification and sensitivity analysis of the new method are also presented

Proposal for a new method of reactor neutron flux distribution determination

Energy Technology Data Exchange (ETDEWEB)

Popic, V R [Institute of nuclear sciences Boris Kidric, Vinca, Beograd (Serbia and Montenegro)

1964-01-15

A method, based on the measurements of the activity produced in a medium flowing with variable velocity through a reactor, for the determination of the neutron flux distribution inside a reactor is considered theoretically (author)

Methods to assess high-resolution subsurface gas concentrations and gas fluxes in wetland ecosystems

DEFF Research Database (Denmark)

Elberling, Bo; Kühl, Michael; Glud, Ronnie Nøhr

2013-01-01

The need for measurements of soil gas concentrations and surface fluxes of greenhouse gases at high temporal and spatial resolution in wetland ecosystem has lead to the introduction of several new analytical techniques and methods. In addition to the automated flux chamber methodology for high-re...

Four-dimensional cone beam CT reconstruction and enhancement using a temporal nonlocal means method

Energy Technology Data Exchange (ETDEWEB)

Jia Xun; Tian Zhen; Lou Yifei; Sonke, Jan-Jakob; Jiang, Steve B. [Center for Advanced Radiotherapy Technologies and Department of Radiation Medicine and Applied Sciences, University of California San Diego, La Jolla, California 92037 (United States); School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, Georgia 30318 (United States); Department of Radiation Oncology, Netherlands Cancer Institute-Antoni van Leeuwenhoek Hospital, Plesmanlaan 121, 1066 CX Amsterdam (Netherlands); Center for Advanced Radiotherapy Technologies and Department of Radiation Medicine and Applied Sciences, University of California San Diego, La Jolla, California 92037 (United States)

2012-09-15

Purpose: Four-dimensional cone beam computed tomography (4D-CBCT) has been developed to provide respiratory phase-resolved volumetric imaging in image guided radiation therapy. Conventionally, it is reconstructed by first sorting the x-ray projections into multiple respiratory phase bins according to a breathing signal extracted either from the projection images or some external surrogates, and then reconstructing a 3D CBCT image in each phase bin independently using FDK algorithm. This method requires adequate number of projections for each phase, which can be achieved using a low gantry rotation or multiple gantry rotations. Inadequate number of projections in each phase bin results in low quality 4D-CBCT images with obvious streaking artifacts. 4D-CBCT images at different breathing phases share a lot of redundant information, because they represent the same anatomy captured at slightly different temporal points. Taking this redundancy along the temporal dimension into account can in principle facilitate the reconstruction in the situation of inadequate number of projection images. In this work, the authors propose two novel 4D-CBCT algorithms: an iterative reconstruction algorithm and an enhancement algorithm, utilizing a temporal nonlocal means (TNLM) method. Methods: The authors define a TNLM energy term for a given set of 4D-CBCT images. Minimization of this term favors those 4D-CBCT images such that any anatomical features at one spatial point at one phase can be found in a nearby spatial point at neighboring phases. 4D-CBCT reconstruction is achieved by minimizing a total energy containing a data fidelity term and the TNLM energy term. As for the image enhancement, 4D-CBCT images generated by the FDK algorithm are enhanced by minimizing the TNLM function while keeping the enhanced images close to the FDK results. A forward-backward splitting algorithm and a Gauss-Jacobi iteration method are employed to solve the problems. The algorithms implementation on

Method and Apparatus of Implementing a Magnetic Shield Flux Sweeper

Science.gov (United States)

Sadleir, John E. (Inventor)

2018-01-01

The present invention relates to a method and apparatus of protecting magnetically sensitive devices with a shield, including: a non-superconducting metal or lower transition temperature (T.sub.c) material compared to a higher transition temperature material, disposed in a magnetic field; means for creating a spatially varying order parameter's |.PSI.(r,T)|.sup.2 in a non-superconducting metal or a lower transition temperature material; wherein a spatially varying order parameter is created by a proximity effect, such that the non-superconducting metal or the lower transition temperature material becomes superconductive as a temperature is lowered, creating a flux-free Meissner state at a center thereof, in order to sweep magnetic flux lines to the periphery.

An Optimized Method for Terrain Reconstruction Based on Descent Images

Directory of Open Access Journals (Sweden)

Xu Xinchao

2016-02-01

Full Text Available An optimization method is proposed to perform high-accuracy terrain reconstruction of the landing area of Chang’e III. First, feature matching is conducted using geometric model constraints. Then, the initial terrain is obtained and the initial normal vector of each point is solved on the basis of the initial terrain. By changing the vector around the initial normal vector in small steps a set of new vectors is obtained. By combining these vectors with the direction of light and camera, the functions are set up on the basis of a surface reflection model. Then, a series of gray values is derived by solving the equations. The new optimized vector is recorded when the obtained gray value is closest to the corresponding pixel. Finally, the optimized terrain is obtained after iteration of the vector field. Experiments were conducted using the laboratory images and descent images of Chang’e III. The results showed that the performance of the proposed method was better than that of the classical feature matching method. It can provide a reference for terrain reconstruction of the landing area in subsequent moon exploration missions.

Fast implementations of reconstruction-based scatter compensation in fully 3D SPECT image reconstruction

International Nuclear Information System (INIS)

Kadrmas, Dan J.; Karimi, Seemeen S.; Frey, Eric C.; Tsui, Benjamin M.W.

1998-01-01

Accurate scatter compensation in SPECT can be performed by modelling the scatter response function during the reconstruction process. This method is called reconstruction-based scatter compensation (RBSC). It has been shown that RBSC has a number of advantages over other methods of compensating for scatter, but using RBSC for fully 3D compensation has resulted in prohibitively long reconstruction times. In this work we propose two new methods that can be used in conjunction with existing methods to achieve marked reductions in RBSC reconstruction times. The first method, coarse-grid scatter modelling, significantly accelerates the scatter model by exploiting the fact that scatter is dominated by low-frequency information. The second method, intermittent RBSC, further accelerates the reconstruction process by limiting the number of iterations during which scatter is modelled. The fast implementations were evaluated using a Monte Carlo simulated experiment of the 3D MCAT phantom with 99m Tc tracer, and also using experimentally acquired data with 201 Tl tracer. Results indicated that these fast methods can reconstruct, with fully 3D compensation, images very similar to those obtained using standard RBSC methods, and in reconstruction times that are an order of magnitude shorter. Using these methods, fully 3D iterative reconstruction with RBSC can be performed well within the realm of clinically realistic times (under 10 minutes for 64x64x24 image reconstruction). (author)

Neutron flux calculation by means of Monte Carlo methods

International Nuclear Information System (INIS)

Barz, H.U.; Eichhorn, M.

1988-01-01

In this report a survey of modern neutron flux calculation procedures by means of Monte Carlo methods is given. Due to the progress in the development of variance reduction techniques and the improvements of computational techniques this method is of increasing importance. The basic ideas in application of Monte Carlo methods are briefly outlined. In more detail various possibilities of non-analog games and estimation procedures are presented, problems in the field of optimizing the variance reduction techniques are discussed. In the last part some important international Monte Carlo codes and own codes of the authors are listed and special applications are described. (author)

Lower Lip Reconstruction after Tumor Resection; a Single Author's Experience with Various Methods

International Nuclear Information System (INIS)

Rifaat, M.A.

2006-01-01

Background: Squamous cell carcinoma is the most frequently seen malignant tumor of the lower lip The more tissue is lost from the lip after tumor resection, the more challenging is the reconstruction. Many methods have been described, but each has its own advantages and its disadvantages. The author presents through his own clinical experience with lower lip reconstruction at tbe NCI, an evaluation of the commonly practiced techniques. Patients and Methods: Over a 3 year period from May 2002 till May 2005, 17 cases presented at the National Cancer Institute, Cairo University, with lower lip squamous cell carcinoma. The lesions involved various regions of the lower lip excluding the commissures. Following resection, the resulting defects ranged from 1/3 of lip to total lip loss. The age of the patients ranged from 28 to 67 years and they were 13 males and 4 females With regards to the reconstructive procedures used, Karapandzic technique (orbicularis oris myocutaneous flaps) was used in 7 patients, 3 of whom underwent secondary lower lip augmentation with upper lip switch flaps Primary Abbe (Lip switch) nap reconstruction was used in two patients, while 2 other patients were reconstructed with bilateral fan flaps with vermilion reconstruction by mucosal advancement in one case and tongue flap in the other The radial forearm free nap was used only in 2 cases, and direct wound closure was achieved in three cases. All patients were evaluated for early postoperative results emphasizing on flap viability and wound problems and for late results emphasizing on oral continence, microstomia, and aesthetic outcome, in addition to the usual oncological follow-up. Results: All flaps used in this study survived completely including the 2 free flaps. In the early postoperative period, minor wound breakdown occurred in all three cases reconstructed by utilizing adjacent cheek skin flaps, but all wounds healed spontaneously. The latter three cases Involved defects greater than 2

What can the annual 10Be solar activity reconstructions tell us about historic space weather?

Science.gov (United States)

Barnard, Luke; McCracken, Ken G.; Owens, Mat J.; Lockwood, Mike

2018-04-01

Context: Cosmogenic isotopes provide useful estimates of past solar magnetic activity, constraining past space climate with reasonable uncertainty. Much less is known about past space weather conditions. Recent advances in the analysis of 10Be by McCracken & Beer (2015, Sol Phys 290: 305-3069) (MB15) suggest that annually resolved 10Be can be significantly affected by solar energetic particle (SEP) fluxes. This poses a problem, and presents an opportunity, as the accurate quantification of past solar magnetic activity requires the SEP effects to be determined and isolated, whilst doing so might provide a valuable record of past SEP fluxes. Aims: We compare the MB15 reconstruction of the heliospheric magnetic field (HMF), with two independent estimates of the HMF derived from sunspot records and geomagnetic variability. We aim to quantify the differences between the HMF reconstructions, and speculate on the origin of these differences. We test whether the differences between the reconstructions appear to depend on known significant space weather events. Methods: We analyse the distributions of the differences between the HMF reconstructions. We consider how the differences vary as a function of solar cycle phase, and, using a Kolmogorov-Smirnov test, we compare the distributions under the two conditions of whether or not large space weather events were known to have occurred. Results: We find that the MB15 reconstructions are generally marginally smaller in magnitude than the sunspot and geomagnetic HMF reconstructions. This bias varies as a function of solar cycle phase, and is largest in the declining phase of the solar cycle. We find that MB15's excision of the years with very large ground level enhancement (GLE) improves the agreement of the 10Be HMF estimate with the sunspot and geomagnetic reconstructions. We find no statistical evidence that GLEs, in general, affect the MB15 reconstruction, but this analysis is limited by having too few samples. We do find

Evaluation of interpolation methods for surface-based motion compensated tomographic reconstruction for cardiac angiographic C-arm data

Energy Technology Data Exchange (ETDEWEB)

Mueller, Kerstin; Schwemmer, Chris; Hornegger, Joachim [Pattern Recognition Lab, Department of Computer Science, Erlangen Graduate School in Advanced Optical Technologies (SAOT), Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen 91058 (Germany); Zheng Yefeng; Wang Yang [Imaging and Computer Vision, Siemens Corporate Research, Princeton, New Jersey 08540 (United States); Lauritsch, Guenter; Rohkohl, Christopher; Maier, Andreas K. [Siemens AG, Healthcare Sector, Forchheim 91301 (Germany); Schultz, Carl [Thoraxcenter, Erasmus MC, Rotterdam 3000 (Netherlands); Fahrig, Rebecca [Department of Radiology, Stanford University, Stanford, California 94305 (United States)

2013-03-15

Purpose: For interventional cardiac procedures, anatomical and functional information about the cardiac chambers is of major interest. With the technology of angiographic C-arm systems it is possible to reconstruct intraprocedural three-dimensional (3D) images from 2D rotational angiographic projection data (C-arm CT). However, 3D reconstruction of a dynamic object is a fundamental problem in C-arm CT reconstruction. The 2D projections are acquired over a scan time of several seconds, thus the projection data show different states of the heart. A standard FDK reconstruction algorithm would use all acquired data for a filtered backprojection and result in a motion-blurred image. In this approach, a motion compensated reconstruction algorithm requiring knowledge of the 3D heart motion is used. The motion is estimated from a previously presented 3D dynamic surface model. This dynamic surface model results in a sparse motion vector field (MVF) defined at control points. In order to perform a motion compensated reconstruction, a dense motion vector field is required. The dense MVF is generated by interpolation of the sparse MVF. Therefore, the influence of different motion interpolation methods on the reconstructed image quality is evaluated. Methods: Four different interpolation methods, thin-plate splines (TPS), Shepard's method, a smoothed weighting function, and a simple averaging, were evaluated. The reconstruction quality was measured on phantom data, a porcine model as well as on in vivo clinical data sets. As a quality index, the 2D overlap of the forward projected motion compensated reconstructed ventricle and the segmented 2D ventricle blood pool was quantitatively measured with the Dice similarity coefficient and the mean deviation between extracted ventricle contours. For the phantom data set, the normalized root mean square error (nRMSE) and the universal quality index (UQI) were also evaluated in 3D image space. Results: The quantitative evaluation of

Current constrained voltage scaled reconstruction (CCVSR) algorithm for MR-EIT and its performance with different probing current patterns

International Nuclear Information System (INIS)

Birguel, Oezlem; Eyueboglu, B Murat; Ider, Y Ziya

2003-01-01

Conventional injected-current electrical impedance tomography (EIT) and magnetic resonance imaging (MRI) techniques can be combined to reconstruct high resolution true conductivity images. The magnetic flux density distribution generated by the internal current density distribution is extracted from MR phase images. This information is used to form a fine detailed conductivity image using an Ohm's law based update equation. The reconstructed conductivity image is assumed to differ from the true image by a scale factor. EIT surface potential measurements are then used to scale the reconstructed image in order to find the true conductivity values. This process is iterated until a stopping criterion is met. Several simulations are carried out for opposite and cosine current injection patterns to select the best current injection pattern for a 2D thorax model. The contrast resolution and accuracy of the proposed algorithm are also studied. In all simulation studies, realistic noise models for voltage and magnetic flux density measurements are used. It is shown that, in contrast to the conventional EIT techniques, the proposed method has the capability of reconstructing conductivity images with uniform and high spatial resolution. The spatial resolution is limited by the larger element size of the finite element mesh and twice the magnetic resonance image pixel size

Evaluation of image reconstruction methods for 123I-MIBG-SPECT. A rank-order study

International Nuclear Information System (INIS)

Soederberg, Marcus; Mattsson, Soeren; Oddstig, Jenny; Uusijaervi-Lizana, Helena; Leide-Svegborn, Sigrid; Valind, Sven; Thorsson, Ola; Garpered, Sabine; Prautzsch, Tilmann; Tischenko, Oleg

2012-01-01

Background: There is an opportunity to improve the image quality and lesion detectability in single photon emission computed tomography (SPECT) by choosing an appropriate reconstruction method and optimal parameters for the reconstruction. Purpose: To optimize the use of the Flash 3D reconstruction algorithm in terms of equivalent iteration (EI) number (number of subsets times the number of iterations) and to compare with two recently developed reconstruction algorithms ReSPECT and orthogonal polynomial expansion on disc (OPED) for application on 123 I-metaiodobenzylguanidine (MIBG)-SPECT. Material and Methods: Eleven adult patients underwent SPECT 4 h and 14 patients 24 h after injection of approximately 200 MBq 123 I-MIBG using a Siemens Symbia T6 SPECT/CT. Images were reconstructed from raw data using the Flash 3D algorithm at eight different EI numbers. The images were ranked by three experienced nuclear medicine physicians according to their overall impression of the image quality. The obtained optimal images were then compared in one further visual comparison with images reconstructed using the ReSPECT and OPED algorithms. Results: The optimal EI number for Flash 3D was determined to be 32 for acquisition 4 h and 24 h after injection. The average rank order (best first) for the different reconstructions for acquisition after 4 h was: Flash 3D 32 > ReSPECT > Flash 3D 64 > OPED, and after 24 h: Flash 3D 16 > ReSPECT > Flash 3D 32 > OPED. A fair level of inter-observer agreement concerning optimal EI number and reconstruction algorithm was obtained, which may be explained by the different individual preferences of what is appropriate image quality. Conclusion: Using Siemens Symbia T6 SPECT/CT and specified acquisition parameters, Flash 3D 32 (4 h) and Flash 3D 16 (24 h), followed by ReSPECT, were assessed to be the preferable reconstruction algorithms in visual assessment of 123 I-MIBG images

Intra nodal reconstruction of the numerical solution generated by the spectro nodal constant for Sn problems of eigenvalues in two-dimensional rectangular geometry

International Nuclear Information System (INIS)

Menezes, Welton Alves de

2009-01-01

In this dissertation the spectral nodal method SD-SGF-CN, cf. spectral diamond - spectral Green's function - constant nodal, is used to determine the angular fluxes averaged along the edges of the homogenized nodes in heterogeneous domains. Using these results, we developed an algorithm for the reconstruction of the node-edge average angular fluxes within the nodes of the spatial grid set up on the domain, since more localized numerical solutions are not generated by coarse-mesh numerical methods. Numerical results are presented to illustrate the accuracy of the algorithm we offer. (author)

Experimental results and validation of a method to reconstruct forces on the ITER test blanket modules

International Nuclear Information System (INIS)

Zeile, Christian; Maione, Ivan A.

2015-01-01

Highlights: • An in operation force measurement system for the ITER EU HCPB TBM has been developed. • The force reconstruction methods are based on strain measurements on the attachment system. • An experimental setup and a corresponding mock-up have been built. • A set of test cases representing ITER relevant excitations has been used for validation. • The influence of modeling errors on the force reconstruction has been investigated. - Abstract: In order to reconstruct forces on the test blanket modules in ITER, two force reconstruction methods, the augmented Kalman filter and a model predictive controller, have been selected and developed to estimate the forces based on strain measurements on the attachment system. A dedicated experimental setup with a corresponding mock-up has been designed and built to validate these methods. A set of test cases has been defined to represent possible excitation of the system. It has been shown that the errors in the estimated forces mainly depend on the accuracy of the identified model used by the algorithms. Furthermore, it has been found that a minimum of 10 strain gauges is necessary to allow for a low error in the reconstructed forces.

Joint image reconstruction method with correlative multi-channel prior for x-ray spectral computed tomography

DEFF Research Database (Denmark)

Kazantsev, Daniil; Jørgensen, Jakob Sauer; Andersen, Martin S

2018-01-01

peaks. The acquired energy-binned data, however, suffer from low signal-to-noise ratio, acquisition artifacts, and frequently angular undersampled conditions. New regularized iterative reconstruction methods have the potential to produce higher quality images and since energy channels are mutually...... to encourage joint smoothing directions. In particular, the method selects reference channels from which to propagate structure in an adaptive and stochastic way while preferring channels with a high data signal-to-noise ratio. The method is compared with current state-of-the-art multi-channel reconstruction...

Computational methods for three-dimensional microscopy reconstruction

CERN Document Server

Frank, Joachim

2014-01-01

Approaches to the recovery of three-dimensional information on a biological object, which are often formulated or implemented initially in an intuitive way, are concisely described here based on physical models of the object and the image-formation process. Both three-dimensional electron microscopy and X-ray tomography can be captured in the same mathematical framework, leading to closely-related computational approaches, but the methodologies differ in detail and hence pose different challenges. The editors of this volume, Gabor T. Herman and Joachim Frank, are experts in the respective methodologies and present research at the forefront of biological imaging and structural biology.   Computational Methods for Three-Dimensional Microscopy Reconstruction will serve as a useful resource for scholars interested in the development of computational methods for structural biology and cell biology, particularly in the area of 3D imaging and modeling.

A new method for three-dimensional laparoscopic ultrasound model reconstruction

DEFF Research Database (Denmark)

Fristrup, C W; Pless, T; Durup, J

2004-01-01

BACKGROUND: Laparoscopic ultrasound is an important modality in the staging of gastrointestinal tumors. Correct staging depends on good spatial understanding of the regional tumor infiltration. Three-dimensional (3D) models may facilitate the evaluation of tumor infiltration. The aim of the study...... accuracy of the new method was tested ex vivo, and the clinical feasibility was tested on a small series of patients. RESULTS: Both electromagnetic tracked reconstructions and the new 3D method gave good volumetric information with no significant difference. Clinical use of the new 3D method showed...

Sensibility of vagina reconstructed by McIndoe method in Mayer-Küster-Rokitansky-Hauser syndrome

Directory of Open Access Journals (Sweden)

Vesanović Svetlana

2008-01-01

Full Text Available Background/Aim. Congenital absence of vagina is a failure present in Mayer-Küster-Rokitansky-Hauser syndrome. Treatment of this anomaly includes nonoperative and operative procedures. McIndoe procedure uses split skin graft by Thiersch. The aim of this study was to determine sensitivity (touch, warmness, coldness of a vagina reconstructed by McIndoe method in Mayer-Küster-Rokitansky-Hauser syndrome and compare it with the normal vagina. Methods. A total of 21 female persons with reconstructed vagina by McIndoe method and 21 female persons with normal vagina were observed. All female persons were divided into groups and subgroups (according to age. Sensibility to touch, warmness and coldness were examined, applying VonFrey's esthesiometer and termoesthesiometer for warmness and coldness in three regions of vagina (enter, middle wall, bothom. The number of positive answers was registrated by touching the mucosa regions for five seconds, five times. Results. The obtained results showed that female patients with a reconstructed vagina by McIndoe method, felt touch at the middle part of wall and in the bottom of vagina better than patients with normal one. Also, the first ones felt warmness at the middle part of wall and coldness in the bottom of vagina, better than the patients with normal vagina. Other results showed no difference in sensibility between reconstructed and normal vagina. Conclusion. Various types of sensibility (touch, warmness, coldness are better or the same in vaginas reconstructed by McIndoe method, in comparison with normal ones. This could be explained by the fact that skin grafts are capable of recovering sensibility.

3D RECONSTRUCTION FROM MULTI-VIEW MEDICAL X-RAY IMAGES – REVIEW AND EVALUATION OF EXISTING METHODS

Directory of Open Access Journals (Sweden)

S. Hosseinian

2015-12-01

Full Text Available The 3D concept is extremely important in clinical studies of human body. Accurate 3D models of bony structures are currently required in clinical routine for diagnosis, patient follow-up, surgical planning, computer assisted surgery and biomechanical applications. However, 3D conventional medical imaging techniques such as computed tomography (CT scan and magnetic resonance imaging (MRI have serious limitations such as using in non-weight-bearing positions, costs and high radiation dose(for CT. Therefore, 3D reconstruction methods from biplanar X-ray images have been taken into consideration as reliable alternative methods in order to achieve accurate 3D models with low dose radiation in weight-bearing positions. Different methods have been offered for 3D reconstruction from X-ray images using photogrammetry which should be assessed. In this paper, after demonstrating the principles of 3D reconstruction from X-ray images, different existing methods of 3D reconstruction of bony structures from radiographs are classified and evaluated with various metrics and their advantages and disadvantages are mentioned. Finally, a comparison has been done on the presented methods with respect to several metrics such as accuracy, reconstruction time and their applications. With regards to the research, each method has several advantages and disadvantages which should be considered for a specific application.

A sparsity-regularized Born iterative method for reconstruction of two-dimensional piecewise continuous inhomogeneous domains

KAUST Repository

Sandhu, Ali Imran; Desmal, Abdulla; Bagci, Hakan

2016-01-01

A sparsity-regularized Born iterative method (BIM) is proposed for efficiently reconstructing two-dimensional piecewise-continuous inhomogeneous dielectric profiles. Such profiles are typically not spatially sparse, which reduces the efficiency of the sparsity-promoting regularization. To overcome this problem, scattered fields are represented in terms of the spatial derivative of the dielectric profile and reconstruction is carried out over samples of the dielectric profile's derivative. Then, like the conventional BIM, the nonlinear problem is iteratively converted into a sequence of linear problems (in derivative samples) and sparsity constraint is enforced on each linear problem using the thresholded Landweber iterations. Numerical results, which demonstrate the efficiency and accuracy of the proposed method in reconstructing piecewise-continuous dielectric profiles, are presented.

Reconstructing dust fluxes and paleoproductivity at the southern Agulhas Plateau since MIS-6

Science.gov (United States)

Frenkel, M. M.; Anderson, R. F.; Winckler, G.

2017-12-01

Understanding the mechanisms underlying glacial-interglacial cycles requires characterizing the role of oceanic feedbacks in climatic changes. For example, increased aeolian iron fluxes to Fe-limited regions of the ocean and corresponding changes in marine productivity could have improved biological pump efficiency and resulted in CO2 drawdown. Here we explore these feedbacks using marine sediment core MDO2-2588 collected from the southern Agulhas Plateau (SAP; 41°S, 26°E), located beneath the modern subtropical front. Today, diatom productivity in this region is Si-limited because high Si utilization south of the polar front (PF) means that water advected northward to our study site is Si-depleted. However, previous work has suggested that extended sea ice cover during glacial periods may have limited diatom productivity south of the PF while frontal systems shifted northward, allowing more Si to reach thermocline of the SAP. Meanwhile, increased glacial dust flux to the SAP may have simultaneously supplied more Fe, contributing to higher glacial productivity. This hypothesis has been supported by observations of higher LGM and MIS-6 productivity at MD02-2588 using bulk biogenic content and diatom assemblages (Romero et al., Paleoceanography, 30 (2015) 118-132). Gradients in d13C between benthic and planktic foraminifera have also been used to support Fe fertilization at this site on millennial timescales (Ziegler et al., Nature Geoscience, 6 (2013) 457-461). Yet, studies have yet to produce coordinated records of dust flux and export production for the SAP. Here, we present records of dust, based on 230Th-normalized 232Th fluxes, and export production using 230Th-normalized excess-Ba and opal fluxes and authigenic U through MIS-6. Preliminary results show that lithogenic fluxes to MD02-2588 were approximately twice as high during MIS-6 as MIS-5e and were concurrent with a two-fold increase in excess-Ba flux. However, this relative increase in lithogenic flux

MR-guided dynamic PET reconstruction with the kernel method and spectral temporal basis functions

Science.gov (United States)

Novosad, Philip; Reader, Andrew J.

2016-06-01

Recent advances in dynamic positron emission tomography (PET) reconstruction have demonstrated that it is possible to achieve markedly improved end-point kinetic parameter maps by incorporating a temporal model of the radiotracer directly into the reconstruction algorithm. In this work we have developed a highly constrained, fully dynamic PET reconstruction algorithm incorporating both spectral analysis temporal basis functions and spatial basis functions derived from the kernel method applied to a co-registered T1-weighted magnetic resonance (MR) image. The dynamic PET image is modelled as a linear combination of spatial and temporal basis functions, and a maximum likelihood estimate for the coefficients can be found using the expectation-maximization (EM) algorithm. Following reconstruction, kinetic fitting using any temporal model of interest can be applied. Based on a BrainWeb T1-weighted MR phantom, we performed a realistic dynamic [18F]FDG simulation study with two noise levels, and investigated the quantitative performance of the proposed reconstruction algorithm, comparing it with reconstructions incorporating either spectral analysis temporal basis functions alone or kernel spatial basis functions alone, as well as with conventional frame-independent reconstruction. Compared to the other reconstruction algorithms, the proposed algorithm achieved superior performance, offering a decrease in spatially averaged pixel-level root-mean-square-error on post-reconstruction kinetic parametric maps in the grey/white matter, as well as in the tumours when they were present on the co-registered MR image. When the tumours were not visible in the MR image, reconstruction with the proposed algorithm performed similarly to reconstruction with spectral temporal basis functions and was superior to both conventional frame-independent reconstruction and frame-independent reconstruction with kernel spatial basis functions. Furthermore, we demonstrate that a joint spectral

Transfer matrix method for four-flux radiative transfer.

Science.gov (United States)

Slovick, Brian; Flom, Zachary; Zipp, Lucas; Krishnamurthy, Srini

2017-07-20

We develop a transfer matrix method for four-flux radiative transfer, which is ideally suited for studying transport through multiple scattering layers. The model predicts the specular and diffuse reflection and transmission of multilayer composite films, including interface reflections, for diffuse or collimated incidence. For spherical particles in the diffusion approximation, we derive closed-form expressions for the matrix coefficients and show remarkable agreement with numerical Monte Carlo simulations for a range of absorption values and film thicknesses, and for an example multilayer slab.

Cardiac C-arm computed tomography using a 3D + time ROI reconstruction method with spatial and temporal regularization

Energy Technology Data Exchange (ETDEWEB)

Mory, Cyril, E-mail: cyril.mory@philips.com [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1, F-69621 Villeurbanne Cedex (France); Philips Research Medisys, 33 rue de Verdun, 92156 Suresnes (France); Auvray, Vincent; Zhang, Bo [Philips Research Medisys, 33 rue de Verdun, 92156 Suresnes (France); Grass, Michael; Schäfer, Dirk [Philips Research, Röntgenstrasse 24–26, D-22335 Hamburg (Germany); Chen, S. James; Carroll, John D. [Department of Medicine, Division of Cardiology, University of Colorado Denver, 12605 East 16th Avenue, Aurora, Colorado 80045 (United States); Rit, Simon [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1 (France); Centre Léon Bérard, 28 rue Laënnec, F-69373 Lyon (France); Peyrin, Françoise [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1, F-69621 Villeurbanne Cedex (France); X-ray Imaging Group, European Synchrotron, Radiation Facility, BP 220, F-38043 Grenoble Cedex (France); Douek, Philippe; Boussel, Loïc [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1 (France); Hospices Civils de Lyon, 28 Avenue du Doyen Jean Lépine, 69500 Bron (France)

2014-02-15

Purpose: Reconstruction of the beating heart in 3D + time in the catheter laboratory using only the available C-arm system would improve diagnosis, guidance, device sizing, and outcome control for intracardiac interventions, e.g., electrophysiology, valvular disease treatment, structural or congenital heart disease. To obtain such a reconstruction, the patient's electrocardiogram (ECG) must be recorded during the acquisition and used in the reconstruction. In this paper, the authors present a 4D reconstruction method aiming to reconstruct the heart from a single sweep 10 s acquisition. Methods: The authors introduce the 4D RecOnstructiOn using Spatial and TEmporal Regularization (short 4D ROOSTER) method, which reconstructs all cardiac phases at once, as a 3D + time volume. The algorithm alternates between a reconstruction step based on conjugate gradient and four regularization steps: enforcing positivity, averaging along time outside a motion mask that contains the heart and vessels, 3D spatial total variation minimization, and 1D temporal total variation minimization. Results: 4D ROOSTER recovers the different temporal representations of a moving Shepp and Logan phantom, and outperforms both ECG-gated simultaneous algebraic reconstruction technique and prior image constrained compressed sensing on a clinical case. It generates 3D + time reconstructions with sharp edges which can be used, for example, to estimate the patient's left ventricular ejection fraction. Conclusions: 4D ROOSTER can be applied for human cardiac C-arm CT, and potentially in other dynamic tomography areas. It can easily be adapted to other problems as regularization is decoupled from projection and back projection.

Cardiac C-arm computed tomography using a 3D + time ROI reconstruction method with spatial and temporal regularization

International Nuclear Information System (INIS)

Mory, Cyril; Auvray, Vincent; Zhang, Bo; Grass, Michael; Schäfer, Dirk; Chen, S. James; Carroll, John D.; Rit, Simon; Peyrin, Françoise; Douek, Philippe; Boussel, Loïc

2014-01-01

Purpose: Reconstruction of the beating heart in 3D + time in the catheter laboratory using only the available C-arm system would improve diagnosis, guidance, device sizing, and outcome control for intracardiac interventions, e.g., electrophysiology, valvular disease treatment, structural or congenital heart disease. To obtain such a reconstruction, the patient's electrocardiogram (ECG) must be recorded during the acquisition and used in the reconstruction. In this paper, the authors present a 4D reconstruction method aiming to reconstruct the heart from a single sweep 10 s acquisition. Methods: The authors introduce the 4D RecOnstructiOn using Spatial and TEmporal Regularization (short 4D ROOSTER) method, which reconstructs all cardiac phases at once, as a 3D + time volume. The algorithm alternates between a reconstruction step based on conjugate gradient and four regularization steps: enforcing positivity, averaging along time outside a motion mask that contains the heart and vessels, 3D spatial total variation minimization, and 1D temporal total variation minimization. Results: 4D ROOSTER recovers the different temporal representations of a moving Shepp and Logan phantom, and outperforms both ECG-gated simultaneous algebraic reconstruction technique and prior image constrained compressed sensing on a clinical case. It generates 3D + time reconstructions with sharp edges which can be used, for example, to estimate the patient's left ventricular ejection fraction. Conclusions: 4D ROOSTER can be applied for human cardiac C-arm CT, and potentially in other dynamic tomography areas. It can easily be adapted to other problems as regularization is decoupled from projection and back projection

A high order compact least-squares reconstructed discontinuous Galerkin method for the steady-state compressible flows on hybrid grids

Science.gov (United States)

Cheng, Jian; Zhang, Fan; Liu, Tiegang

2018-06-01

In this paper, a class of new high order reconstructed DG (rDG) methods based on the compact least-squares (CLS) reconstruction [23,24] is developed for simulating the two dimensional steady-state compressible flows on hybrid grids. The proposed method combines the advantages of the DG discretization with the flexibility of the compact least-squares reconstruction, which exhibits its superior potential in enhancing the level of accuracy and reducing the computational cost compared to the underlying DG methods with respect to the same number of degrees of freedom. To be specific, a third-order compact least-squares rDG(p1p2) method and a fourth-order compact least-squares rDG(p2p3) method are developed and investigated in this work. In this compact least-squares rDG method, the low order degrees of freedom are evolved through the underlying DG(p1) method and DG(p2) method, respectively, while the high order degrees of freedom are reconstructed through the compact least-squares reconstruction, in which the constitutive relations are built by requiring the reconstructed polynomial and its spatial derivatives on the target cell to conserve the cell averages and the corresponding spatial derivatives on the face-neighboring cells. The large sparse linear system resulted by the compact least-squares reconstruction can be solved relatively efficient when it is coupled with the temporal discretization in the steady-state simulations. A number of test cases are presented to assess the performance of the high order compact least-squares rDG methods, which demonstrates their potential to be an alternative approach for the high order numerical simulations of steady-state compressible flows.

Diffusion Capillary Phantom vs. Human Data: Outcomes for Reconstruction Methods Depend on Evaluation Medium

Directory of Open Access Journals (Sweden)

Sarah D. Lichenstein

2016-09-01

Full Text Available Purpose: Diffusion MRI provides a non-invasive way of estimating structural connectivity in the brain. Many studies have used diffusion phantoms as benchmarks to assess the performance of different tractography reconstruction algorithms and assumed that the results can be applied to in vivo studies. Here we examined whether quality metrics derived from a common, publically available, diffusion phantom can reliably predict tractography performance in human white matter tissue. Material and Methods: We compared estimates of fiber length and fiber crossing among a simple tensor model (diffusion tensor imaging, a more complicated model (ball-and-sticks and model-free (diffusion spectrum imaging, generalized q-sampling imaging reconstruction methods using a capillary phantom and in vivo human data (N=14. Results: Our analysis showed that evaluation outcomes differ depending on whether they were obtained from phantom or human data. Specifically, the diffusion phantom favored a more complicated model over a simple tensor model or model-free methods for resolving crossing fibers. On the other hand, the human studies showed the opposite pattern of results, with the model-free methods being more advantageous than model-based methods or simple tensor models. This performance difference was consistent across several metrics, including estimating fiber length and resolving fiber crossings in established white matter pathways. Conclusions: These findings indicate that the construction of current capillary diffusion phantoms tends to favor complicated reconstruction models over a simple tensor model or model-free methods, whereas the in vivo data tends to produce opposite results. This brings into question the previous phantom-based evaluation approaches and suggests that a more realistic phantom or simulation is necessary to accurately predict the relative performance of different tractography reconstruction methods. Acronyms: BSM: ball-and-sticks model; d

A resolution-enhancing image reconstruction method for few-view differential phase-contrast tomography

Science.gov (United States)

Guan, Huifeng; Anastasio, Mark A.

2017-03-01

It is well-known that properly designed image reconstruction methods can facilitate reductions in imaging doses and data-acquisition times in tomographic imaging. The ability to do so is particularly important for emerging modalities such as differential X-ray phase-contrast tomography (D-XPCT), which are currently limited by these factors. An important application of D-XPCT is high-resolution imaging of biomedical samples. However, reconstructing high-resolution images from few-view tomographic measurements remains a challenging task. In this work, a two-step sub-space reconstruction strategy is proposed and investigated for use in few-view D-XPCT image reconstruction. It is demonstrated that the resulting iterative algorithm can mitigate the high-frequency information loss caused by data incompleteness and produce images that have better preserved high spatial frequency content than those produced by use of a conventional penalized least squares (PLS) estimator.

A simple measurement method of molecular relaxation in a gas by reconstructing acoustic velocity dispersion

Science.gov (United States)

Zhu, Ming; Liu, Tingting; Zhang, Xiangqun; Li, Caiyun

2018-01-01

Recently, a decomposition method of acoustic relaxation absorption spectra was used to capture the entire molecular multimode relaxation process of gas. In this method, the acoustic attenuation and phase velocity were measured jointly based on the relaxation absorption spectra. However, fast and accurate measurements of the acoustic attenuation remain challenging. In this paper, we present a method of capturing the molecular relaxation process by only measuring acoustic velocity, without the necessity of obtaining acoustic absorption. The method is based on the fact that the frequency-dependent velocity dispersion of a multi-relaxation process in a gas is the serial connection of the dispersions of interior single-relaxation processes. Thus, one can capture the relaxation times and relaxation strengths of N decomposed single-relaxation dispersions to reconstruct the entire multi-relaxation dispersion using the measurements of acoustic velocity at 2N  +  1 frequencies. The reconstructed dispersion spectra are in good agreement with experimental data for various gases and mixtures. The simulations also demonstrate the robustness of our reconstructive method.

A simple method to take urethral sutures for neobladder reconstruction and radical prostatectomy

Directory of Open Access Journals (Sweden)

B Satheesan

2007-01-01

Full Text Available For the reconstruction of urethra-vesical anastamosis after radical prostatectomy and for neobladder reconstruction, taking adequate sutures to include the urethral mucosa is vital. Due to the retraction of the urethra and unfriendly pelvis, the process of taking satisfactory urethral sutures may be laborious. Here, we describe a simple method by which we could overcome similar technical problems during surgery using Foley catheter as the guide for the suture.

A method for neutron dosimetry in ultrahigh flux environments

International Nuclear Information System (INIS)

Ougouag, A.M.; Wemple, C.A.; Rogers, J.W.

1996-01-01

A method for neutron dosimetry in ultrahigh flux environments is developed, and devices embodying it are proposed and simulated using a Monte Carlo code. The new approach no longer assumes a linear relationship between the fluence and the activity of the nuclides formed by irradiation. It accounts for depletion of the original ''foil'' material and for decay and depletion of the formed nuclides. In facilities where very high fluences are possible, the fluences inferred by activity measurements may be ambiguous. A method for resolving these ambiguities is also proposed and simulated. The new method and proposed devices should make possible the use of materials not traditionally considered desirable for neutron activation dosimetry

SU-E-I-45: Reconstruction of CT Images From Sparsely-Sampled Data Using the Logarithmic Barrier Method

International Nuclear Information System (INIS)

Xu, H

2014-01-01

Purpose: To develop and investigate whether the logarithmic barrier (LB) method can result in high-quality reconstructed CT images using sparsely-sampled noisy projection data Methods: The objective function is typically formulated as the sum of the total variation (TV) and a data fidelity (DF) term with a parameter λ that governs the relative weight between them. Finding the optimized value of λ is a critical step for this approach to give satisfactory results. The proposed LB method avoid using λ by constructing the objective function as the sum of the TV and a log function whose augment is the DF term. Newton's method was used to solve the optimization problem. The algorithm was coded in MatLab2013b. Both Shepp-Logan phantom and a patient lung CT image were used for demonstration of the algorithm. Measured data were simulated by calculating the projection data using radon transform. A Poisson noise model was used to account for the simulated detector noise. The iteration stopped when the difference of the current TV and the previous one was less than 1%. Results: Shepp-Logan phantom reconstruction study shows that filtered back-projection (FBP) gives high streak artifacts for 30 and 40 projections. Although visually the streak artifacts are less pronounced for 64 and 90 projections in FBP, the 1D pixel profiles indicate that FBP gives noisier reconstructed pixel values than LB does. A lung image reconstruction is presented. It shows that use of 64 projections gives satisfactory reconstructed image quality with regard to noise suppression and sharp edge preservation. Conclusion: This study demonstrates that the logarithmic barrier method can be used to reconstruct CT images from sparsely-amped data. The number of projections around 64 gives a balance between the over-smoothing of the sharp demarcation and noise suppression. Future study may extend to CBCT reconstruction and improvement on computation speed

An Evaluation of Phylogenetic Methods for Reconstructing Transmitted HIV Variants using Longitudinal Clonal HIV Sequence Data

Science.gov (United States)

McCloskey, Rosemary M.; Liang, Richard H.; Harrigan, P. Richard; Brumme, Zabrina L.

2014-01-01

ABSTRACT A population of human immunodeficiency virus (HIV) within a host often descends from a single transmitted/founder virus. The high mutation rate of HIV, coupled with long delays between infection and diagnosis, make isolating and characterizing this strain a challenge. In theory, ancestral reconstruction could be used to recover this strain from sequences sampled in chronic infection; however, the accuracy of phylogenetic techniques in this context is unknown. To evaluate the accuracy of these methods, we applied ancestral reconstruction to a large panel of published longitudinal clonal and/or single-genome-amplification HIV sequence data sets with at least one intrapatient sequence set sampled within 6 months of infection or seroconversion (n = 19,486 sequences, median [interquartile range] = 49 [20 to 86] sequences/set). The consensus of the earliest sequences was used as the best possible estimate of the transmitted/founder. These sequences were compared to ancestral reconstructions from sequences sampled at later time points using both phylogenetic and phylogeny-naive methods. Overall, phylogenetic methods conferred a 16% improvement in reproducing the consensus of early sequences, compared to phylogeny-naive methods. This relative advantage increased with intrapatient sequence diversity (P reconstructing ancestral indel variation, especially within indel-rich regions of the HIV genome. Although further improvements are needed, our results indicate that phylogenetic methods for ancestral reconstruction significantly outperform phylogeny-naive alternatives, and we identify experimental conditions and study designs that can enhance accuracy of transmitted/founder virus reconstruction. IMPORTANCE When HIV is transmitted into a new host, most of the viruses fail to infect host cells. Consequently, an HIV infection tends to be descended from a single “founder” virus. A priority target for the vaccine research, these transmitted/founder viruses are

A new open-source pin power reconstruction capability in DRAGON5 and DONJON5 neutronic codes

Energy Technology Data Exchange (ETDEWEB)

Chambon, R., E-mail: richard-pierre.chambon@polymtl.ca; Hébert, A., E-mail: alain.hebert@polymtl.ca

2015-08-15

In order to better optimize the fuel energy efficiency in PWRs, the burnup distribution has to be known as accurately as possible, ideally in each pin. However, this level of detail is lost when core calculations are performed with homogenized cross-sections. The pin power reconstruction (PPR) method can be used to get back those levels of details as accurately as possible in a small additional computing time frame compared to classical core calculations. Such a de-homogenization technique for core calculations using arbitrarily homogenized fuel assembly geometries was presented originally by Fliscounakis et al. In our work, the same methodology was implemented in the open-source neutronic codes DRAGON5 and DONJON5. The new type of Selengut homogenization, called macro-calculation water gap, also proposed by Fliscounakis et al. was implemented. Some important details on the methodology were emphasized in order to get precise results. Validation tests were performed on 12 configurations of 3×3 clusters where simulations in transport theory and in diffusion theory followed by pin-power reconstruction were compared. The results shows that the pin power reconstruction and the Selengut macro-calculation water gap methods were correctly implemented. The accuracy of the simulations depends on the SPH method and on the homogenization geometry choices. Results show that the heterogeneous homogenization is highly recommended. SPH techniques were investigated with flux-volume and Selengut normalization, but the former leads to inaccurate results. Even though the new Selengut macro-calculation water gap method gives promising results regarding flux continuity at assembly interfaces, the classical Selengut approach is more reliable in terms of maximum and average errors in the whole range of configurations.

Monte Carlo methods for flux expansion solutions of transport problems

International Nuclear Information System (INIS)

Spanier, J.

1999-01-01

Adaptive Monte Carlo methods, based on the use of either correlated sampling or importance sampling, to obtain global solutions to certain transport problems have recently been described. The resulting learning algorithms are capable of achieving geometric convergence when applied to the estimation of a finite number of coefficients in a flux expansion representation of the global solution. However, because of the nonphysical nature of the random walk simulations needed to perform importance sampling, conventional transport estimators and source sampling techniques require modification to be used successfully in conjunction with such flux expansion methods. It is shown how these problems can be overcome. First, the traditional path length estimators in wide use in particle transport simulations are generalized to include rather general detector functions (which, in this application, are the individual basis functions chosen for the flus expansion). Second, it is shown how to sample from the signed probabilities that arise as source density functions in these applications, without destroying the zero variance property needed to ensure geometric convergence to zero error

System and method for image reconstruction, analysis, and/or de-noising

KAUST Repository

Laleg-Kirati, Taous-Meriem

2015-11-12

A method and system can analyze, reconstruct, and/or denoise an image. The method and system can include interpreting a signal as a potential of a Schrödinger operator, decomposing the signal into squared eigenfunctions, reducing a design parameter of the Schrödinger operator, analyzing discrete spectra of the Schrödinger operator and combining the analysis of the discrete spectra to construct the image.

A Method for Interactive 3D Reconstruction of Piecewise Planar Objects from Single Images

OpenAIRE

Sturm , Peter; Maybank , Steve

1999-01-01

International audience; We present an approach for 3D reconstruction of objects from a single image. Obviously, constraints on the 3D structure are needed to perform this task. Our approach is based on user-provided coplanarity, perpendicularity and parallelism constraints. These are used to calibrate the image and perform 3D reconstruction. The method is described in detail and results are provided.

An Analytical Diffusion–Expansion Model for Forbush Decreases Caused by Flux Ropes

Science.gov (United States)

Dumbović, Mateja; Heber, Bernd; Vršnak, Bojan; Temmer, Manuela; Kirin, Anamarija

2018-06-01

We present an analytical diffusion–expansion Forbush decrease (FD) model ForbMod, which is based on the widely used approach of an initially empty, closed magnetic structure (i.e., flux rope) that fills up slowly with particles by perpendicular diffusion. The model is restricted to explaining only the depression caused by the magnetic structure of the interplanetary coronal mass ejection (ICME). We use remote CME observations and a 3D reconstruction method (the graduated cylindrical shell method) to constrain initial boundary conditions of the FD model and take into account CME evolutionary properties by incorporating flux rope expansion. Several flux rope expansion modes are considered, which can lead to different FD characteristics. In general, the model is qualitatively in agreement with observations, whereas quantitative agreement depends on the diffusion coefficient and the expansion properties (interplay of the diffusion and expansion). A case study was performed to explain the FD observed on 2014 May 30. The observed FD was fitted quite well by ForbMod for all expansion modes using only the diffusion coefficient as a free parameter, where the diffusion parameter was found to correspond to an expected range of values. Our study shows that, in general, the model is able to explain the global properties of an FD caused by a flux rope and can thus be used to help understand the underlying physics in case studies.

Proposed method for reconstructing velocity profiles using a multi-electrode electromagnetic flow meter

International Nuclear Information System (INIS)

Kollár, László E; Lucas, Gary P; Zhang, Zhichao

2014-01-01

An analytical method is developed for the reconstruction of velocity profiles using measured potential distributions obtained around the boundary of a multi-electrode electromagnetic flow meter (EMFM). The method is based on the discrete Fourier transform (DFT), and is implemented in Matlab. The method assumes the velocity profile in a section of a pipe as a superposition of polynomials up to sixth order. Each polynomial component is defined along a specific direction in the plane of the pipe section. For a potential distribution obtained in a uniform magnetic field, this direction is not unique for quadratic and higher-order components; thus, multiple possible solutions exist for the reconstructed velocity profile. A procedure for choosing the optimum velocity profile is proposed. It is applicable for single-phase or two-phase flows, and requires measurement of the potential distribution in a non-uniform magnetic field. The potential distribution in this non-uniform magnetic field is also calculated for the possible solutions using weight values. Then, the velocity profile with the calculated potential distribution which is closest to the measured one provides the optimum solution. The reliability of the method is first demonstrated by reconstructing an artificial velocity profile defined by polynomial functions. Next, velocity profiles in different two-phase flows, based on results from the literature, are used to define the input velocity fields. In all cases, COMSOL Multiphysics is used to model the physical specifications of the EMFM and to simulate the measurements; thus, COMSOL simulations produce the potential distributions on the internal circumference of the flow pipe. These potential distributions serve as inputs for the analytical method. The reconstructed velocity profiles show satisfactory agreement with the input velocity profiles. The method described in this paper is most suitable for stratified flows and is not applicable to axisymmetric flows in

A New Energy-Based Method for 3-D Finite-Element Nonlinear Flux Linkage computation of Electrical Machines

DEFF Research Database (Denmark)

Lu, Kaiyuan; Rasmussen, Peter Omand; Ritchie, Ewen

2011-01-01

This paper presents a new method for computation of the nonlinear flux linkage in 3-D finite-element models (FEMs) of electrical machines. Accurate computation of the nonlinear flux linkage in 3-D FEM is not an easy task. Compared to the existing energy-perturbation method, the new technique......-perturbation method. The new method proposed is validated using experimental results on two different permanent magnet machines....

A fast 4D cone beam CT reconstruction method based on the OSC-TV algorithm.

Science.gov (United States)

Mascolo-Fortin, Julia; Matenine, Dmitri; Archambault, Louis; Després, Philippe

2018-01-01

Four-dimensional cone beam computed tomography allows for temporally resolved imaging with useful applications in radiotherapy, but raises particular challenges in terms of image quality and computation time. The purpose of this work is to develop a fast and accurate 4D algorithm by adapting a GPU-accelerated ordered subsets convex algorithm (OSC), combined with the total variation minimization regularization technique (TV). Different initialization schemes were studied to adapt the OSC-TV algorithm to 4D reconstruction: each respiratory phase was initialized either with a 3D reconstruction or a blank image. Reconstruction algorithms were tested on a dynamic numerical phantom and on a clinical dataset. 4D iterations were implemented for a cluster of 8 GPUs. All developed methods allowed for an adequate visualization of the respiratory movement and compared favorably to the McKinnon-Bates and adaptive steepest descent projection onto convex sets algorithms, while the 4D reconstructions initialized from a prior 3D reconstruction led to better overall image quality. The most suitable adaptation of OSC-TV to 4D CBCT was found to be a combination of a prior FDK reconstruction and a 4D OSC-TV reconstruction with a reconstruction time of 4.5 minutes. This relatively short reconstruction time could facilitate a clinical use.

A sparsity-regularized Born iterative method for reconstruction of two-dimensional piecewise continuous inhomogeneous domains

KAUST Repository

Sandhu, Ali Imran

2016-04-10

A sparsity-regularized Born iterative method (BIM) is proposed for efficiently reconstructing two-dimensional piecewise-continuous inhomogeneous dielectric profiles. Such profiles are typically not spatially sparse, which reduces the efficiency of the sparsity-promoting regularization. To overcome this problem, scattered fields are represented in terms of the spatial derivative of the dielectric profile and reconstruction is carried out over samples of the dielectric profile\\'s derivative. Then, like the conventional BIM, the nonlinear problem is iteratively converted into a sequence of linear problems (in derivative samples) and sparsity constraint is enforced on each linear problem using the thresholded Landweber iterations. Numerical results, which demonstrate the efficiency and accuracy of the proposed method in reconstructing piecewise-continuous dielectric profiles, are presented.

The performance of diphoton primary vertex reconstruction methods in H → γγ+Met channel of ATLAS experiment

Science.gov (United States)

Tomiwa, K. G.

2017-09-01

The search for new physics in the H → γγ+met relies on how well the missing transverse energy is reconstructed. The Met algorithm used by the ATLAS experiment in turns uses input variables like photon and jets which depend on the reconstruction of the primary vertex. This document presents the performance of di-photon vertex reconstruction algorithms (hardest vertex method and Neural Network method). Comparing the performance of these algorithms for the nominal Standard Model sample and the Beyond Standard Model sample, we see the overall performance of the Neural Network method of primary vertex selection performed better than the Hardest vertex method.

Low energy neutral particle fluxes in the JET divertor

International Nuclear Information System (INIS)

Reichle, R.; Horton, L.D.; Ingesson, L.C.; Jaeckel, H.J.; McCormick, G.K.; Loarte, A.; Simonini, R.; Stamp, M.F.

1997-01-01

First measurements are presented of the total power loss through neutral particles and their average energy in the JET divertor. The method used distinguishes between the heat flux and the electromagnetic radiation on bolometers. This is done by comparing measurements from inside the divertor either with opposite lines of sight or with a tomographic reconstruction of the radiation. The typical value of the total power loss in the divertor through neutrals is about 1 MW. The average energy of the neutral particles at the inner divertor leg is 1.5-3 eV when detachment is in progress, which agrees with EDGE2D/NIMBUS modelling. (orig.)

A method for climate and vegetation reconstruction through the inversion of a dynamic vegetation model

Energy Technology Data Exchange (ETDEWEB)

Garreta, Vincent; Guiot, Joel; Hely, Christelle [CEREGE, UMR 6635, CNRS, Universite Aix-Marseille, Europole de l' Arbois, Aix-en-Provence (France); Miller, Paul A.; Sykes, Martin T. [Lund University, Department of Physical Geography and Ecosystems Analysis, Geobiosphere Science Centre, Lund (Sweden); Brewer, Simon [Universite de Liege, Institut d' Astrophysique et de Geophysique, Liege (Belgium); Litt, Thomas [University of Bonn, Paleontological Institute, Bonn (Germany)

2010-08-15

Climate reconstructions from data sensitive to past climates provide estimates of what these climates were like. Comparing these reconstructions with simulations from climate models allows to validate the models used for future climate prediction. It has been shown that for fossil pollen data, gaining estimates by inverting a vegetation model allows inclusion of past changes in carbon dioxide values. As a new generation of dynamic vegetation model is available we have developed an inversion method for one model, LPJ-GUESS. When this novel method is used with high-resolution sediment it allows us to bypass the classic assumptions of (1) climate and pollen independence between samples and (2) equilibrium between the vegetation, represented as pollen, and climate. Our dynamic inversion method is based on a statistical model to describe the links among climate, simulated vegetation and pollen samples. The inversion is realised thanks to a particle filter algorithm. We perform a validation on 30 modern European sites and then apply the method to the sediment core of Meerfelder Maar (Germany), which covers the Holocene at a temporal resolution of approximately one sample per 30 years. We demonstrate that reconstructed temperatures are constrained. The reconstructed precipitation is less well constrained, due to the dimension considered (one precipitation by season), and the low sensitivity of LPJ-GUESS to precipitation changes. (orig.)

Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain.

NARCIS (Netherlands)

Gavai, Anand K.; Supandi, Farahaniza; Hettling, Hannes; Murell, Paul; Leunissen, Jack A.M.; van Beek, Johannes H.G.M.

2015-01-01

Predicting the distribution of metabolic fluxes in biochemical networks is of major interest in systems biology. Several databases provide metabolic reconstructions for different organisms. Software to analyze flux distributions exists, among others for the proprietary MATLAB environment. Given the

Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain

NARCIS (Netherlands)

Gavai, A.K.; Supandi, F.; Hettling, H.; Murrell, P.; Leunissen, J.A.M.; Beek, van J.H.G.M.

2015-01-01

Predicting the distribution of metabolic fluxes in biochemical networks is of major interest in systems biology. Several databases provide metabolic reconstructions for different organisms. Software to analyze flux distributions exists, among others for the proprietary MATLAB environment. Given the

Continuous sea-level reconstructions beyond the Pleistocene: improving the Mediterranean sea-level method

Science.gov (United States)

Grant, K.; Rohling, E. J.; Amies, J.

2017-12-01

Sea-level (SL) reconstructions over glacial-interglacial timeframes are critical for understanding the equilibrium response of ice sheets to sustained warming. In particular, continuous and high-resolution SL records are essential for accurately quantifying `natural' rates of SL rise. Global SL changes are well-constrained since the last glacial maximum ( 20,000 years ago, ky) by radiometrically-dated corals and paleoshoreline data, and fairly well-constrained over the last glacial cycle ( 150 ky). Prior to that, however, studies of ice-volume:SL relationships tend to rely on benthic δ18O, as geomorphological evidence is far more sparse and less reliably dated. An alternative SL reconstruction method (the `marginal basin' approach) was developed for the Red Sea over 500 ky, and recently attempted for the Mediterranean over 5 My (Rohling et al., 2014, Nature). This method exploits the strong sensitivity of seawater δ18O in these basins to SL changes in the relatively narrow and shallow straits which connect the basins with the open ocean. However, the initial Mediterranean SL method did not resolve sea-level highstands during Northern Hemisphere insolation maxima, when African monsoon run-off - strongly depleted in δ18O - reached the Mediterranean. Here, we present improvements to the `marginal basin' sea-level reconstruction method. These include a new `Med-Red SL stack', which combines new probabilistic Mediterranean and Red Sea sea-level stacks spanning the last 500 ky. We also show how a box model-data comparison of water-column δ18O changes over a monsoon interval allows us to quantify the monsoon versus SL δ18O imprint on Mediterranean foraminiferal carbonate δ18O records. This paves the way for a more accurate and fully continuous SL reconstruction extending back through the Pliocene.

Geometric reconstruction methods for electron tomography

Energy Technology Data Exchange (ETDEWEB)

Alpers, Andreas, E-mail: alpers@ma.tum.de [Zentrum Mathematik, Technische Universität München, D-85747 Garching bei München (Germany); Gardner, Richard J., E-mail: Richard.Gardner@wwu.edu [Department of Mathematics, Western Washington University, Bellingham, WA 98225-9063 (United States); König, Stefan, E-mail: koenig@ma.tum.de [Zentrum Mathematik, Technische Universität München, D-85747 Garching bei München (Germany); Pennington, Robert S., E-mail: robert.pennington@uni-ulm.de [Center for Electron Nanoscopy, Technical University of Denmark, DK-2800 Kongens Lyngby (Denmark); Boothroyd, Chris B., E-mail: ChrisBoothroyd@cantab.net [Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, D-52425 Jülich (Germany); Houben, Lothar, E-mail: l.houben@fz-juelich.de [Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, D-52425 Jülich (Germany); Dunin-Borkowski, Rafal E., E-mail: rdb@fz-juelich.de [Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, D-52425 Jülich (Germany); Joost Batenburg, Kees, E-mail: Joost.Batenburg@cwi.nl [Centrum Wiskunde and Informatica, NL-1098XG, Amsterdam, The Netherlands and Vision Lab, Department of Physics, University of Antwerp, B-2610 Wilrijk (Belgium)

2013-05-15

Electron tomography is becoming an increasingly important tool in materials science for studying the three-dimensional morphologies and chemical compositions of nanostructures. The image quality obtained by many current algorithms is seriously affected by the problems of missing wedge artefacts and non-linear projection intensities due to diffraction effects. The former refers to the fact that data cannot be acquired over the full 180° tilt range; the latter implies that for some orientations, crystalline structures can show strong contrast changes. To overcome these problems we introduce and discuss several algorithms from the mathematical fields of geometric and discrete tomography. The algorithms incorporate geometric prior knowledge (mainly convexity and homogeneity), which also in principle considerably reduces the number of tilt angles required. Results are discussed for the reconstruction of an InAs nanowire. - Highlights: ► Four algorithms for electron tomography are introduced that utilize prior knowledge. ► Objects are assumed to be homogeneous; convexity and regularity is also discussed. ► We are able to reconstruct slices of a nanowire from as few as four projections. ► Algorithms should be selected based on the specific reconstruction task at hand.

Geometric reconstruction methods for electron tomography

International Nuclear Information System (INIS)

Alpers, Andreas; Gardner, Richard J.; König, Stefan; Pennington, Robert S.; Boothroyd, Chris B.; Houben, Lothar; Dunin-Borkowski, Rafal E.; Joost Batenburg, Kees

2013-01-01

Electron tomography is becoming an increasingly important tool in materials science for studying the three-dimensional morphologies and chemical compositions of nanostructures. The image quality obtained by many current algorithms is seriously affected by the problems of missing wedge artefacts and non-linear projection intensities due to diffraction effects. The former refers to the fact that data cannot be acquired over the full 180° tilt range; the latter implies that for some orientations, crystalline structures can show strong contrast changes. To overcome these problems we introduce and discuss several algorithms from the mathematical fields of geometric and discrete tomography. The algorithms incorporate geometric prior knowledge (mainly convexity and homogeneity), which also in principle considerably reduces the number of tilt angles required. Results are discussed for the reconstruction of an InAs nanowire. - Highlights: ► Four algorithms for electron tomography are introduced that utilize prior knowledge. ► Objects are assumed to be homogeneous; convexity and regularity is also discussed. ► We are able to reconstruct slices of a nanowire from as few as four projections. ► Algorithms should be selected based on the specific reconstruction task at hand

A semi-automatic method for positioning a femoral bone reconstruction for strict view generation.

Science.gov (United States)

Milano, Federico; Ritacco, Lucas; Gomez, Adrian; Gonzalez Bernaldo de Quiros, Fernan; Risk, Marcelo

2010-01-01

In this paper we present a semi-automatic method for femoral bone positioning after 3D image reconstruction from Computed Tomography images. This serves as grounding for the definition of strict axial, longitudinal and anterior-posterior views, overcoming the problem of patient positioning biases in 2D femoral bone measuring methods. After the bone reconstruction is aligned to a standard reference frame, new tomographic slices can be generated, on which unbiased measures may be taken. This could allow not only accurate inter-patient comparisons but also intra-patient comparisons, i.e., comparisons of images of the same patient taken at different times. This method could enable medical doctors to diagnose and follow up several bone deformities more easily.

A Method to Assess Flux Hazards at CSP Plants to Reduce Avian Mortality

Energy Technology Data Exchange (ETDEWEB)

Ho, Clifford K.; Wendelin, Timothy; Horstman, Luke; Yellowhair, Julius

2017-06-27

A method to evaluate avian flux hazards at concentrating solar power plants (CSP) has been developed. A heat-transfer model has been coupled to simulations of the irradiance in the airspace above a CSP plant to determine the feather temperature along prescribed bird flight paths. Probabilistic modeling results show that the irradiance and assumed feather properties (thickness, absorptance, heat capacity) have the most significant impact on the simulated feather temperature, which can increase rapidly (hundreds of degrees Celsius in seconds) depending on the parameter values. The avian flux hazard model is being combined with a plant performance model to identify alternative heliostat standby aiming strategies that minimize both avian flux hazards and negative impacts on plant performance.

Geometric morphometric methods for three-dimensional virtual reconstruction of a fragmented cranium: the case of Angelo Poliziano.

Science.gov (United States)

Benazzi, S; Stansfield, E; Milani, C; Gruppioni, G

2009-07-01

The process of forensic identification of missing individuals is frequently reliant on the superimposition of cranial remains onto an individual's picture and/or facial reconstruction. In the latter, the integrity of the skull or a cranium is an important factor in successful identification. Here, we recommend the usage of computerized virtual reconstruction and geometric morphometrics for the purposes of individual reconstruction and identification in forensics. We apply these methods to reconstruct a complete cranium from facial remains that allegedly belong to the famous Italian humanist of the fifteenth century, Angelo Poliziano (1454-1494). Raw data was obtained by computed tomography scans of the Poliziano face and a complete reference skull of a 37-year-old Italian male. Given that the amount of distortion of the facial remains is unknown, two reconstructions are proposed: The first calculates the average shape between the original and its reflection, and the second discards the less preserved left side of the cranium under the assumption that there is no deformation on the right. Both reconstructions perform well in the superimposition with the original preserved facial surface in a virtual environment. The reconstruction by means of averaging between the original and reflection yielded better results during the superimposition with portraits of Poliziano. We argue that the combination of computerized virtual reconstruction and geometric morphometric methods offers a number of advantages over traditional plastic reconstruction, among which are speed, reproducibility, easiness of manipulation when superimposing with pictures in virtual environment, and assumptions control.

Analysis of limb function after various reconstruction methods according to tumor location following resection of pediatric malignant bone tumors

Directory of Open Access Journals (Sweden)

Tokuhashi Yasuaki

2010-05-01

Full Text Available Abstract Background In the reconstruction of the affected limb in pediatric malignant bone tumors, since the loss of joint function affects limb-length discrepancy expected in the future, reconstruction methods that not only maximally preserve the joint function but also maintain good limb function are necessary. We analysis limb function of reconstruction methods by tumor location following resection of pediatric malignant bone tumors. Patients and methods We classified the tumors according to their location into 3 types by preoperative MRI, and evaluated reconstruction methods after wide resection, paying attention to whether the joint function could be preserved. The mean age of the patients was 10.6 years, Osteosarcoma was observed in 26 patients, Ewing's sarcoma in 3, and PNET(primitive neuroectodermal tumor and chondrosarcoma (grade 1 in 1 each. Results Type I were those located in the diaphysis, and reconstruction was performed using a vascularized fibular graft(vascularized fibular graft. Type 2 were those located in contact with the epiphyseal line or within 1 cm from this line, and VFG was performed in 1, and distraction osteogenesis in 1. Type III were those extending from the diaphysis to the epiphysis beyond the epiphyseal line, and a Growing Kotz was mainly used in 10 patients. The mean functional assessment score was the highest for Type I (96%: n = 4 according to the type and for VFG (99% according to the reconstruction method. Conclusion The final functional results were the most satisfactory for Types I and II according to tumor location. Biological reconstruction such as VFG and distraction osteogenesis without a prosthesis are so high score in the MSTS rating system. Therefore, considering the function of the affected limb, a limb reconstruction method allowing the maximal preservation of joint function should be selected after careful evaluation of the effects of chemotherapy and the location of the tumor.

Method and system for progressive mesh storage and reconstruction using wavelet-encoded height fields

Science.gov (United States)

Baxes, Gregory A. (Inventor); Linger, Timothy C. (Inventor)

2011-01-01

Systems and methods are provided for progressive mesh storage and reconstruction using wavelet-encoded height fields. A method for progressive mesh storage includes reading raster height field data, and processing the raster height field data with a discrete wavelet transform to generate wavelet-encoded height fields. In another embodiment, a method for progressive mesh storage includes reading texture map data, and processing the texture map data with a discrete wavelet transform to generate wavelet-encoded texture map fields. A method for reconstructing a progressive mesh from wavelet-encoded height field data includes determining terrain blocks, and a level of detail required for each terrain block, based upon a viewpoint. Triangle strip constructs are generated from vertices of the terrain blocks, and an image is rendered utilizing the triangle strip constructs. Software products that implement these methods are provided.

Real-time diamagnetic flux measurements on ASDEX Upgrade.

Science.gov (United States)

Giannone, L; Geiger, B; Bilato, R; Maraschek, M; Odstrčil, T; Fischer, R; Fuchs, J C; McCarthy, P J; Mertens, V; Schuhbeck, K H

2016-05-01

Real-time diamagnetic flux measurements are now available on ASDEX Upgrade. In contrast to the majority of diamagnetic flux measurements on other tokamaks, no analog summation of signals is necessary for measuring the change in toroidal flux or for removing contributions arising from unwanted coupling to the plasma and poloidal field coil currents. To achieve the highest possible sensitivity, the diamagnetic measurement and compensation coil integrators are triggered shortly before plasma initiation when the toroidal field coil current is close to its maximum. In this way, the integration time can be chosen to measure only the small changes in flux due to the presence of plasma. Two identical plasma discharges with positive and negative magnetic field have shown that the alignment error with respect to the plasma current is negligible. The measured diamagnetic flux is compared to that predicted by TRANSP simulations. The poloidal beta inferred from the diamagnetic flux measurement is compared to the values calculated from magnetic equilibrium reconstruction codes. The diamagnetic flux measurement and TRANSP simulation can be used together to estimate the coupled power in discharges with dominant ion cyclotron resonance heating.

Evaluation of image reconstruction methods for {sup 123}I-MIBG-SPECT. A rank-order study

Energy Technology Data Exchange (ETDEWEB)

Soederberg, Marcus; Mattsson, Soeren; Oddstig, Jenny; Uusijaervi-Lizana, Helena; Leide-Svegborn, Sigrid [Medical Radiation Physics, Dept. of Clinical Sciences Malmoe, Lund Univ., Skaane Univ. Hospital, Malmoe (Sweden)], e-mail: marcus.soderberg@med.lu.se; Valind, Sven; Thorsson, Ola; Garpered, Sabine [Dept. of Clinical Physiology, Skaane Univ. Hospital, Malmoe (Sweden); Prautzsch, Tilmann [Scivis wissenschaftlice Bildverarbeitung GmbH, Goettingen (Germany); Tischenko, Oleg [Research Unit Medical Radiation Physics and Diagnostics (AMSD), Helmholtz Zentrum Muenchen (Germany); German Research Center for Environmental Health, Neuherberg (Germany)

2012-09-15

Background: There is an opportunity to improve the image quality and lesion detectability in single photon emission computed tomography (SPECT) by choosing an appropriate reconstruction method and optimal parameters for the reconstruction. Purpose: To optimize the use of the Flash 3D reconstruction algorithm in terms of equivalent iteration (EI) number (number of subsets times the number of iterations) and to compare with two recently developed reconstruction algorithms ReSPECT and orthogonal polynomial expansion on disc (OPED) for application on {sup 123}I-metaiodobenzylguanidine (MIBG)-SPECT. Material and Methods: Eleven adult patients underwent SPECT 4 h and 14 patients 24 h after injection of approximately 200 MBq {sup 123}I-MIBG using a Siemens Symbia T6 SPECT/CT. Images were reconstructed from raw data using the Flash 3D algorithm at eight different EI numbers. The images were ranked by three experienced nuclear medicine physicians according to their overall impression of the image quality. The obtained optimal images were then compared in one further visual comparison with images reconstructed using the ReSPECT and OPED algorithms. Results: The optimal EI number for Flash 3D was determined to be 32 for acquisition 4 h and 24 h after injection. The average rank order (best first) for the different reconstructions for acquisition after 4 h was: Flash 3D{sub 32} > ReSPECT > Flash 3D{sub 64} > OPED, and after 24 h: Flash 3D{sub 16} > ReSPECT > Flash 3D{sub 32} > OPED. A fair level of inter-observer agreement concerning optimal EI number and reconstruction algorithm was obtained, which may be explained by the different individual preferences of what is appropriate image quality. Conclusion: Using Siemens Symbia T6 SPECT/CT and specified acquisition parameters, Flash 3D{sub 32} (4 h) and Flash 3D{sub 16} (24 h), followed by ReSPECT, were assessed to be the preferable reconstruction algorithms in visual assessment of {sup 123}I-MIBG images.

CT image reconstruction of steel pipe section from few projections using the method of rotating polar-coordinate