WorldWideScience

Sample records for fluorescence depolarization measurements

  1. Identifiability analysis of rotational diffusion tensor and electronic transition moments measured in time-resolved fluorescence depolarization experiment

    Szubiakowski, Jacek P.

    2014-01-01

    The subject of this paper is studies of the deterministic identifiability of molecular parameters, such as rotational diffusion tensor components and orientation of electronic transition moments, resulting from the time-resolved fluorescence anisotropy experiment. In the most general case considered, a pair of perpendicularly polarized emissions enables the unique determination of all the rotational diffusion tensor's principal components. The influence of the tensor's symmetry and the associated degeneration of its eigenvalues on the identifiability of the electronic transitions moments is systematically investigated. The analysis reveals that independently of the rotational diffusion tensor's symmetry, the transition moments involved in photoselection and emission processes cannot be uniquely identified without a priori information about their mutual orientation or their orientation with respect to the principal axes of the tensor. Moreover, it is shown that increasing the symmetry of the rotational diffusion tensor deteriorates the degree of the transition moments identifiability. To obtain these results analytically, a novel approach to solve bilinear system of equations for Markov parameters is applied. The effect of the additional information, obtained from fluorescence measurements for different molecular mobilities, to improve the identifiability at various levels of analysis is shown. The effectiveness and reliability of the target analysis method for experimental determination of the molecular parameters is also discussed

  2. Isomerization and fluorescence depolarization of merocyanine 540 ...

    , ... polymers resemble globular proteins and can encapsulate hydrophobic solutes. ... PAA opens up due to electrostatic repulsion, the fluorescent probe becomes exposed to ... conformational transition of such polymers have been studied by ...

  3. Depolarization of fluorescence of polyatomic molecules in noble gas solvents

    Blokhin, A. P.; Gelin, M. F.; Kalosha, I. I.; Matylitsky, V. V.; Erohin, N. P.; Barashkov, M. V.; Tolkachev, V. A.

    2001-10-01

    The collisional depolarization of fluorescence is studied for p-quarterphenyl (PQP) in He, Ar, Xe solvents, under pressures ranging from zero to nearly atmospheric. The results are interpreted within the Keilson-Storer model of the orientational relaxation and smooth rigid body collision dynamics. This allows us to estimate the rate of the angular momentum scrambling due to encounters of PQP with its partners. The collisions are shown to be neither strong nor weak, so that the averaged number of encounters giving rise to the PQP angular momentum randomization equals to 33 (PQP-He), 4.5 (PQP-Ar), and 2.1 (PQP-Xe).

  4. Reorientational motion of a cross-link junction in a poly(dimethylsiloxane) network measured by time-resolved fluorescence depolarization

    Stein, A.D. (Department of Chemistry, Stanford University, Stanford, California 94305 (United States)); Hoffman, D.A. (Department of Materials Science and Engineering, Stanford University, Stanford, California 94305 (United States)); Frank, C.W. (Department of Chemical Engineering, Stanford University, Stanford, California 94305 (United States)); Fayer, M.D. (Department of Chemistry, Stanford University, Stanford, California 94305 (United States))

    1992-02-15

    The reorientational dynamics of a cross-link junction in poly(dimethylsiloxane) networks, measured by the fluorescence anisotropy decay of a chromophore tagged to the cross-link, have been investigated over a range of temperatures from {ital T}{sub {ital g}}+75 to {ital T}{sub {ital g}}+150. The probe chromophore, 1-dimethylamino-5-sulfonylnaphthalene amide (dansyl amide), is pendant to a trifunctional silane that acts as a cross-linking molecule. In cyclohexanol, the fluorescence anisotropy decay is in agreement with Debye--Stokes--Einstein hydrodynamic theory (rotational diffusion) demonstrating that the cross-linker can be used as a probe of orientational relaxation. The fluorescence anisotropy decays at a rapid rate in an end-linked poly(dimethyl siloxane) network reflecting fast reorientational motion of the cross-link junction. This reorientation appears diffusive and has a temperature dependence in accord with the Williams--Landel--Ferry equation. A model is proposed that suggests that reorientation and translational motion of the cross-link occur simultaneously and are both coupled to fluctuations of the polymer chain ends.

  5. Reorientational motion of a cross-link junction in a poly(dimethylsiloxane) network measured by time-resolved fluorescence depolarization

    Stein, A.D.; Hoffman, D.A.; Frank, C.W.; Fayer, M.D.

    1992-01-01

    The reorientational dynamics of a cross-link junction in poly(dimethylsiloxane) networks, measured by the fluorescence anisotropy decay of a chromophore tagged to the cross-link, have been investigated over a range of temperatures from T g +75 to T g +150. The probe chromophore, 1-dimethylamino-5-sulfonylnaphthalene amide (dansyl amide), is pendant to a trifunctional silane that acts as a cross-linking molecule. In cyclohexanol, the fluorescence anisotropy decay is in agreement with Debye--Stokes--Einstein hydrodynamic theory (rotational diffusion) demonstrating that the cross-linker can be used as a probe of orientational relaxation. The fluorescence anisotropy decays at a rapid rate in an end-linked poly(dimethyl siloxane) network reflecting fast reorientational motion of the cross-link junction. This reorientation appears diffusive and has a temperature dependence in accord with the Williams--Landel--Ferry equation. A model is proposed that suggests that reorientation and translational motion of the cross-link occur simultaneously and are both coupled to fluctuations of the polymer chain ends

  6. Fluorescence/depolarization lidar for mid-range stand-off detection of biological agents

    Mierczyk, Z.; Kopczyński, K.; Zygmunt, M.; Wojtanowski, J.; Młynczak, J.; Gawlikowski, A.; Młodzianko, A.; Piotrowski, W.; Gietka, A.; Knysak, P.; Drozd, T.; Muzal, M.; Kaszczuk, M.; Ostrowski, R.; Jakubaszek, M.

    2011-06-01

    LIDAR system for real-time standoff detection of bio-agents is presented and preliminary experimental results are discussed. The detection approach is based on two independent physical phenomena: (1) laser induced fluorescence (LIF), (2) depolarization resulting from elastic scattering on non-spherical particles. The device includes three laser sources, two receiving telescopes, depolarization component and spectral signature analyzing spectrograph. It was designed to provide the stand-off detection capability at ranges from 200 m up to several kilometers. The system as a whole forms a mobile platform for vehicle or building installation. Additionally, it's combined with a scanning mechanics and advanced software, which enable to conduct the semi-automatic monitoring of a specified space sector. For fluorescence excitation, 3-rd (355 nm) and 4-th (266 nm) harmonics of Nd:YAG pulsed lasers are used. They emit short (~6 ns) pulses with the repetition rate of 20 Hz. Collecting optics for fluorescence echo detection and spectral content analysis includes 25 mm diameter f/4 Newton telescope, Czerny Turner spectrograph and 32-channel PMT. Depending on the grating applied, the spectral resolution from 20 nm up to 3 nm per channel can be achieved. The system is also equipped with an eye-safe (1.5 μm) Nd:YAG OPO laser for elastic backscattering/depolarization detection. The optical echo signal is collected by Cassegrain telescope with aperture diameter of 12.5 mm. Depolarization detection component based on polarizing beam-splitter serves as the stand-off particle-shape analyzer, which is very valuable in case of non-spherical bio-aerosols sensing.

  7. Neutron depolarization measurements of HoCo2 near the magnetic phase transition

    Kraan, W.

    1976-09-01

    The magnetic phase transition in HoCo 2 at zero applied field is investigated. The Landau theory of magnetic phase transition is discussed. The experimental technique for neutron depolarization measurements in the temperature range 65-90 K is described

  8. Measurement of the broadening and depolarization of a Gaussian beam to transmit in fog water

    Serrano, G.; Reynoso, E; Davila, J. A.

    2012-01-01

    In this paper, we develop a controlled experimental environment in the laboratory, a waterproof camera where it will introduce artificial fog and become a beam of linearly polarized Gaussian laser light, creating sprawl, broadening and depolarization is studied with a system capable of measuring such phenomena. Most studies on dispersion have focused on the lobes of backscattering, however the correct conditions with the incident light beam a substantial fraction of light is scattered in the forward direction forming a widened light lobe. With this light lobe formed could be studied with extreme precision many factors such as the existence of single or multiple scattering and the amount by which this is carried out. This is of great importance in the estimation of lidar returns because these foundations can learn important information such as extinction and backscatter coefficients, particulate pollutants in the atmosphere and thus understand the operation model of nature. (Author)

  9. Monitoring by fluorescence measurements

    Malcolme-Lawes, D.J.; Gifford, L.A.

    1981-01-01

    A fluorimetric detector is described in which the fluorescence excitation source may be 3 H, 14 C, 35 S, 147 Pm or 63 Ni. Such a detector can be adapted for use with flowing liquid systems especially liquid chromatography systems. (U.K.)

  10. LAP-ND: a new instrument for vector polarization analysis and neutron depolarization measurements at FRJ-2

    Ioffe, Alexander; Bussmann, Klaus; Dohmen, Ludwig; Axelrod, Leonid; Gordeev, Gennadi; Brueckel, Thomas

    2004-01-01

    The method of vector analysis of the neutron polarization allows for the determination of both the magnitude and the direction of the magnetization vector in the sample. A directional distribution of the magnetization in a sample results in a spread of the direction of the polarization vector in space and thus in the depolarization of the incident beam. A new neutron depolarization set up is installed at the research reactor FRJ-2 of the Forschungszentrum Juelich. The main feature of the set up is the use of rather long wavelength, λ=(4-6.5) A, neutrons thus allowing for a significant increase in the sensitivity of depolarization measurements. The set up uses a non-cryogenic zero-field sample chamber with the residual magnetic field of about 1 mG. It will be used for the determination of the sample magnetization at mesoscopic and macroscopic levels and for the study of magnetic phase transitions, magnetic nanostructures, magnetic glasses, etc

  11. LAP-ND: a new instrument for vector polarization analysis and neutron depolarization measurements at FRJ-2

    Ioffe, Alexander; Bussmann, Klaus; Dohmen, Ludwig; Axelrod, Leonid; Gordeev, Gennadi; Brueckel, Thomas

    2004-07-15

    The method of vector analysis of the neutron polarization allows for the determination of both the magnitude and the direction of the magnetization vector in the sample. A directional distribution of the magnetization in a sample results in a spread of the direction of the polarization vector in space and thus in the depolarization of the incident beam. A new neutron depolarization set up is installed at the research reactor FRJ-2 of the Forschungszentrum Juelich. The main feature of the set up is the use of rather long wavelength, {lambda}=(4-6.5) A, neutrons thus allowing for a significant increase in the sensitivity of depolarization measurements. The set up uses a non-cryogenic zero-field sample chamber with the residual magnetic field of about 1 mG. It will be used for the determination of the sample magnetization at mesoscopic and macroscopic levels and for the study of magnetic phase transitions, magnetic nanostructures, magnetic glasses, etc.

  12. Polar winter cloud depolarization measurements with the CANDAC Rayleigh-Mie-Raman Lidar

    McCullough, E. M.; Nott, G. J.; Duck, T. J.; Sica, R. J.; Doyle, J. G.; Pike-thackray, C.; Drummond, J. R.

    2011-12-01

    Clouds introduce a significant positive forcing to the Arctic radiation budget and this is strongest during the polar winter when shortwave radiation is absent (Intrieri et al., 2002). The amount of forcing depends on the occurrence probability and optical depth of the clouds as well as the cloud particle phase (Ebert and Curry 1992). Mixed-phase clouds are particularly complex as they involve interactions between three phases of water (vapour, liquid and ice) coexisting in the same cloud. Although significant progress has been made in characterizing wintertime Arctic clouds (de Boer et al., 2009 and 2011), there is considerable variability in the relative abundance of particles of each phase, in the morphology of solid particles, and in precipitation rates depending on the meteorology at the time. The Canadian Network for the Detection of Atmospheric Change (CANDAC) Rayleigh-Mie-Raman Lidar (CRL) was installed in the Canadian High Arctic at Eureka, Nunavut (80°N, 86°W) in 2008-2009. The remotely-operated system began with measurement capabilities for multi-wavelength aerosol extinction, water vapour mixing ratio, and tropospheric temperature profiles, as well as backscatter cross section coefficient and colour ratio. In 2010, a new depolarization channel was added. The capability to measure the polarization state of the return signal allows the characterization of the cloud in terms of liquid and ice water content, enabling the lidar to probe all three phases of water in these clouds. Lidar depolarization results from 2010 and 2011 winter clouds at Eureka will be presented, with a focus on differences in downwelling radiation between mixed phase clouds and ice clouds. de Boer, G., E.W. Eloranta, and M.D. Shupe (2009), Arctic mixed-phase stratiform cloud properties from multiple years of surface-based measurements at two high-latitude locations, Journal of Atmospheric Sciences, 66 (9), 2874-2887. de Boer, G., H. Morrison, M. D. Shupe, and R. Hildner (2011

  13. Measurement of the depolarization rate of positive muons in copper and aluminium

    Gauster, W.B.; Heffner, R.H.; Huang, C.Y.; Hutson, R.L.; Leon, M.; Parkin, D.M.; Schillaci, M.E.; Triftshaeuser, W.; Wampler, W.R.

    1977-01-01

    Positive muon spin rotation experiments for polycrystalline Cu and Al from 19 K to temperatures near the melting points are reported. At low temperatures, the depolarization associated with localization of the muons at octahedral interstitial sites is seen in Cu, while in Al only slight depolarization is observed below 250 K. At high temperatures, no evidence for trapping of positive muons at vacancies in thermal equilibrium is found for either metal. It is concluded that the muons either diffuse too slowly to find vacancies or, if they do find vacancies, are bound too weakly to remain trapped. (author)

  14. A rate-equation model for polarized laser-induced fluorescence to measure electric field in glow discharge He plasmas

    Takiyama, K.; Watanabe, M.; Oda, T.

    1998-01-01

    Possibility of applying polarized laser-induced fluorescence (LIF) spectroscopy for measuring the electric field in a plasma with a large collisional depolarization has been investigated. A rate equation model including the depolarization process was employed to analyze the time evolution of LIF polarization components. The polarized LIF pulse shapes observed in the sheath of a He glow discharge plasma were successfully reproduced, and the electric field distribution was obtained with high accuracy. (author)

  15. Study on in-situ electrochemical impedance spectroscopy measurement of anodic reaction in SO_2 depolarized electrolysis process

    Xue Lulu; Zhang Ping; Chen Songzhe; Wang Laijun

    2014-01-01

    SO_2 depolarized electrolysis (SDE) is the pivotal reaction in hybrid sulfur process, one of the most promising approaches for mass hydrogen production without CO_2 emission. The net result of hybrid sulfur process is to split water into hydrogen and oxygen at a relatively low voltage, which will dramatically decrease the energy consumption for the production of hydrogen. The potential loss of SDE process could be separated into four components, i.e. reversible cell potential, anode overpotential, cathode overpotential and ohmic loss. So far, it has been identified that the total cell potential for the SO_2 depolarized electrolyzer is dominantly controlled by sulfuric acid concentration of the anolyte and electrolysis temperature of the electrolysis process. In this work, an in-situ Electrochemical Impedance Spectroscopy (EIS) measurement of the anodic SDE reaction was conducted. Results show that anodic overpotential is mainly resulted from the SO_2 oxidation reaction other than ohmic resistance or mass transfer limitation. This study extends the understanding to SDE process and gives suggestions for the further improvement of the SDE performance. (author)

  16. Measuring fluorescence polarization with a dichrometer.

    Sutherland, John C

    2017-09-01

    A method for obtaining fluorescence polarization data from an instrument designed to measure circular and linear dichroism is compared with a previously reported approach. The new method places a polarizer between the sample and a detector mounted perpendicular to the direction of the incident beam and results in determination of the fluorescence polarization ratio, whereas the previous method does not use a polarizer and yields the fluorescence anisotropy. A similar analysis with the detector located axially with the excitation beam demonstrates that there is no frequency modulated signal due to fluorescence polarization in the absence of a polarizer. Copyright © 2017. Published by Elsevier Inc.

  17. Measurement of the depolarization in the elastic proton scattering on 1H, 27Al, and 89Y in the low energy range

    Schmitt, R.

    1986-01-01

    With the Erlangen QDQ magnetic spectrometer angular distributions of the depolarization in the elastic scattering of protons on 27 Al, 89 Y at 11 MeV and 1 H at 12 MeV were measured. The evaluation was performed for yttrium and aluminium by adding of additional terms in the optical model which regard the spin-spin interaction. The optical-model parameter without spin-spin potentials were stated by measurements of the cross section and the analyzing power in the 4π scattering chamber in Erlangen at several energies. The calculation of the depolarization which emerges because of the spin-spin interaction was performed by means of DWBA. The depolarization of the proton-proton scattering was evaluated by scattering-phase analysis. The fits were thereby performed on analyzing-power data. The electrical P-wave scattering phases resulted to δ 10 = 4.442±0.121, δ 11 = -2.515±0.026, and δ 12 = 0.937±0.038 (all in degrees). (orig./HSI) [de

  18. The relationship between the apparent diffusion coefficient measured by magnetic resonance imaging, anoxic depolarization, and glutamate efflux during experimental cerebral ischemia.

    Harris, N G; Zilkha, E; Houseman, J; Symms, M R; Obrenovitch, T P; Williams, S R

    2000-01-01

    A reduction in the apparent diffusion coefficient (ADC) of water measured by magnetic resonance imaging (MRI) has been shown to occur early after cerebrovascular occlusion. This change may be a useful indicator of brain tissue adversely affected by inadequate blood supply. The objective of this study was to test the hypothesis that loss of membrane ion homeostasis and depolarization can occur simultaneously with the drop in ADC. Also investigated was whether elevation of extracellular glutamate ([GLU]e) would occur before ADC changes. High-speed MRI of the trace of the diffusion tensor (15-second time resolution) was combined with simultaneous recording of the extracellular direct current (DC) potential and on-line [GLU]e from the striatum of the anesthetized rat. After a control period, data were acquired during remote middle cerebral artery occlusion for 60 minutes, followed by 30 minutes of reperfusion, and cardiac arrest-induced global ischemia. After either focal or global ischemia, the ADC was reduced by 10 to 25% before anoxic depolarization occurred. After either insult, the time for half the maximum change in ADC was significantly shorter than the corresponding DC potential parameter (P potential and did not peak until much later after either ischemic insult. This study demonstrates that ADC changes can occur before membrane depolarization and that high [GLU]e has no involvement in the early rapid ADC decrease.

  19. Measurement of the depolarization of the reaction 27Al (p vector, p vector.) 27Al for the study of the spin-spin potential

    Loeh, H.

    1981-01-01

    For the study of the spin-spin interactions in the optical potential the depolarization in the elastic scattering of polarized protons was measured. The double-scattering experiments were performed in the angular range 40 0 -110 0 at an incident energy of 10.35 MeV at the Erlangen QD magnetic spectrometer. The determination of the optical model parameters independent from the spin-spin potentials resulted by the fit of those to the observables and sigmasup(di). These were obtained from a measurement of the angular distribution of the analyzing power and the differential cross section in the 4π-scattering chamber for the reaction 27 Al (p vector,psub(o)) at the same energy. The compound contributions present at this energy, which can also influence the depolarization, were regarded by the calculation of the compound-elastic non-spin-flip respectively spin-flip subcross sections by means of the formalism of Hofmann, Richard, Tepel, and Weidenmueller. Because of the target nucleus 27 Al posesses in the ground state a spin I=5/2 also the possible quadrupole spin flip had to be included in the analysis. This was performed by coupled channel calculations. The depolarization data corrected according to compound contributions and quadrupole effects could now be applied to the study of the spin-spin potentials by means of DWBA calculations. As result it turned out that for the description of the experimental data a spherical spin-spin potential of the strength Vsub(SS)=1.5+-0.3 MeV had to be assumed. For the addition of a tensor term however no necessity resulted. (orig.) [de

  20. Fluorescence lifetime measurement of radical ions

    Ichinose, Nobuyuki; Kinugasa, Jun-ichiro; Hagiri, Masahide; Nakayama, Toshihiro; Murakami, Hiroshi; Kishimoto, Maki; Daido, Hiroyuki

    2004-01-01

    One-photonic excitation of a charge transfer complex of hexamethoxybenzene (HMB) and nitrosonium tetrafluoroborate (NO + BF 4 - ) in acetonitrile afforded fluorescences emission from excited radical cation of HMB (HMB + *). Lifetime of the excited radical ion species was measured to be 7 ps by the pump-probe transient absorption technique. The lifetime was much shorter than that of free radical ion (63 ps), indicating the presence of an interaction between HMB + * and NO in the excited complex. (author)

  1. Estimating Depolarization with the Jones Matrix Quality Factor

    Hilfiker, James N.; Hale, Jeffrey S.; Herzinger, Craig M.; Tiwald, Tom; Hong, Nina; Schöche, Stefan; Arwin, Hans

    2017-11-01

    Mueller matrix (MM) measurements offer the ability to quantify the depolarization capability of a sample. Depolarization can be estimated using terms such as the depolarization index or the average degree of polarization. However, these calculations require measurement of the complete MM. We propose an alternate depolarization metric, termed the Jones matrix quality factor, QJM, which does not require the complete MM. This metric provides a measure of how close, in a least-squares sense, a Jones matrix can be found to the measured Mueller matrix. We demonstrate and compare the use of QJM to other traditional calculations of depolarization for both isotropic and anisotropic depolarizing samples; including non-uniform coatings, anisotropic crystal substrates, and beetle cuticles that exhibit both depolarization and circular diattenuation.

  2. Laser-excited fluorescence for measuring atmospheric pollution

    Menzies, R. T.

    1975-01-01

    System measures amount of given pollutant at specific location. Infrared laser aimed at location has wavelength that will cause molecules of pollutant to fluoresce. Detector separates fluorescence from other radiation and measures its intensity to indicate concentration of pollutant.

  3. Neutron Depolarization in Superconductors

    Zhuchenko, N. K.

    1995-04-01

    The dependences of neutron depolarization on applied magnetic field are deduced along the magnetization hysteresis loop in terms of the Bean model of the critical state. The depolarization in uniaxial superconductors with the reversible magnetization, including uniaxial magnetic superconductors, is also considered. A strong depolarization is expected if the neutrons travel along the vortex lines. On calcule la dépendance en champ magnétique de la dépolarisation des neutrons le long du cycle d'hystérésis en termes du modèle critique de Bean. On considère aussi la dépolarisation dans les supraconducteurs uniaxiaux en fonction de l'aimantation réversible, y compris pour les supraconducteurs magnétiques. On attend une forte dépolarisation si les neutrons se propagent le long des vortex.

  4. Measurement of the depolarization of the reaction 27Al(p vector,p vector.)27Al for the study of the spin-spin potential

    Loeh, H.

    1981-01-01

    For the study of the spin-spin interaction in the optical potential the depolarisation in the elastic scattering of polarized protons was measured. The double-scattering experiments were performed in the angular range 40 0 -110 0 at an incident energy of 10.35 MeV at the Erlangen QD-magnetic spectrometer. The determination of the optical model parameters independent from the spin-spin potentials was performed by the fitting of these to the observables and sigmasup(di). These were obtained from a measurement of the angular distribution of the analyzing power and the differential cross section in the 4π-scattering chamber for the reaction 27 Al(p vector,p 0 ) at the same energy. The compound contributions present at this energy, which can also influence the depolarization, were regarded by the calculation of the compound-elastic non-spin-flip respectively spin-flip subcross sections by means of the formalism of Hofmann, Richert, Tepel and Weidenmueller. Because the target nucleus 27 Al possesses in the ground state a spin I=5/2, also the possible quadrupole spin flip had to be included. This was performed by coupled-channel calculations. The respecting compound contributions and quadrupole effects corrected depolarization data could by used for the study of the spin-spin potentials by means of DWBA calculations. As result it was shown that for the description of the experimental data a spherical spin-spin potential of the strength Vsub(SS)=1.5+-0.3 MeV had to be assumed. (orig.) [de

  5. Fluorescent nanosensors for intracellular measurements: synthesis, characterisation, calibration and measurement

    Arpan Shailesh Desai

    2014-01-01

    Full Text Available Measurement of intracellular acidification is important for understanding fundamental biological pathways as well as developing effective therapeutic strategies. Fluorescent pH nanosensors are an enabling technology for real-time monitoring of intracellular acidification. The physicochemical characteristics of nanosensors can be engineered to target specific cellular compartments and respond to external stimuli. Therefore nanosensors represent a versatile approach for probing biological pathways inside cells. The fundamental components of nanosensors comprise a pH-sensitive fluorophore (signal transducer and a pH-insensitive reference fluorophore (internal standard immobilised in an inert non-toxic matrix. The inert matrix prevents interference of cellular components with the sensing elements as well as minimizing potentially harmful effects of some fluorophores on cell function. Fluorescent nanosensors are synthesised using standard laboratory equipment and are detectable by non-invasive widely accessibly imaging techniques. The outcomes of studies employing this technology are dependent on reliable methodology for performing measurements. In particular special consideration must be given to conditions for sensor calibration, uptake conditions and parameters for image analysis. We describe procedures for: 1 synthesis and characterisation of polyacrylamide and silica based nanosensors 2 nanosensor calibration and 3 performing measurements using fluorescence microscopy.

  6. Peroxy Radical Measurements via Laser Induced Fluorescence

    Trawny, Katrin; Tatum Ernest, Cheryl; Novelli, Anna; Elste, Thomas; Plaß-Dülmer, Christian; Rudolf, Markus; Martinez, Monica; Harder, Hartwig; Lelieveld, Jos

    2013-04-01

    We present a newly built Laser Induced Fluorescence (LIF) system to measure the sum of all peroxy radicals (RO2) utilizing chemical conversion to OH. This instrument operates in two different modes: the ROx mode (sum of OH, HO2, and RO2) and the HOx mode (sum of OH and HO2). The HOx mode is used to derive the RO2 data from the ROx measurements. A model approach was used during instrumental development to identify the key parameters needed for the conversion process in front of the detection area and to optimize sensitivity. The instrument was then carefully characterized in various lab experiments, where it could be shown that the wall losses for HO2 are negligible and that nearly all HO2 is converted to OH in front of the detection zone. The pressure and temperature dependencies were also analyzed and assured that the instrument does not show any photolytical interference. As the instrument is calibrated with only one kind of peroxy radicals it was very important that the differences in sensitivity for different peroxy radicals are acceptable. Lab experiments as well as first results from the HOPE 2012 intensive field campaign, which took place in summer 2012 at the Global Atmosphere Watch (GAW) station of the German Weather Service, will be discussed.

  7. Simulating fluorescence light-canopy interaction in support of laser-induced fluorescence measurements

    Rosema, A.; Verhoef, W.; Schroote, J.; Snel, J.F.H.

    1991-01-01

    In the Netherlands an operational field instrument for the measurement of laser induced fluorescence of vegetation (LEAF) is developed. In addition, plant physiological and remote sensing research is done to support this new remote sensing instrument. This paper presents a general introduction on the subject of laser-induced fluorescence, including the relation between chlorophyll fluorescence and photosynthesis, spectral characteristics, and previous research. Also the LEAF system is briefly described. Subsequently, the development of a leaf fluorescence model (KMF) and a canopy fluorescence model (FLSAIL) are reported. With these simulation models a sensitivity study is carried out. Fluorescence of 685 nm appears to be most suitable to obtain information on photosynthesis and stress, but is also influenced by canopy structure. Separation of these two effects is studied

  8. Molecular anisotropy effects in carbon K-edge scattering: depolarized diffuse scattering and optical anisotropy

    Stone, Kevin H.

    2014-07-14

    Some polymer properties, such as conductivity, are very sensitive to short- and intermediate-range orientational and positional ordering of anisotropic molecular functional groups, and yet means to characterize orientational order in disordered systems are very limited. We demonstrate that resonant scattering at the carbon K-edge is uniquely sensitive to short-range orientation correlations in polymers through depolarized scattering at high momentum transfers, using atactic polystyrene as a well-characterized test system. Depolarized scattering is found to coexist with unpolarized fluorescence, and to exhibit pronounced anisotropy. We also quantify the spatially averaged optical anisotropy from low-angle reflectivity measurements, finding anisotropy consistent with prior visible, x-ray absorption, and theoretical studies. The average anisotropy is much smaller than that in the depolarized scattering and the two have different character. Both measurements exhibit clear spectral signatures from the phenyl rings and the polyethylene-like backbone. Discussion focuses on analysis considerations and prospects for using this depolarized scattering for studies of disorder in soft condensed matter.

  9. Mercury mass measurement in fluorescent lamps via neutron activation analysis

    Viererbl, L.; Vinš, M.; Lahodová, Z.; Fuksa, A.; Kučera, J.; Koleška, M.; Voljanskij, A.

    2015-01-01

    Mercury is an essential component of fluorescent lamps. Not all fluorescent lamps are recycled, resulting in contamination of the environment with toxic mercury, making measurement of the mercury mass used in fluorescent lamps important. Mercury mass measurement of lamps via instrumental neutron activation analysis (NAA) was tested under various conditions in the LVR-15 research reactor. Fluorescent lamps were irradiated in different positions in vertical irradiation channels and a horizontal channel in neutron fields with total fluence rates from 3×10 8 cm −2 s −1 to 10 14 cm −2 s −1 . The 202 Hg(n,γ) 203 Hg nuclear reaction was used for mercury mass evaluation. Activities of 203 Hg and others induced radionuclides were measured via gamma spectrometry with an HPGe detector at various times after irradiation. Standards containing an Hg 2 Cl 2 compound were used to determine mercury mass. Problems arise from the presence of elements with a large effective cross section in luminescent material (europium, antimony and gadolinium) and glass (boron). The paper describes optimization of the NAA procedure in the LVR-15 research reactor with particular attention to influence of neutron self-absorption in fluorescent lamps. - Highlights: • Mercury is an essential component of fluorescent lamps. • Fluorescent lamps were irradiated in neutron fields in research reactor. • 203 Hg induced radionuclide activity was measured using gamma spectrometry. • Mercury mass in fluorescent lamps can be measured by neutron activation analysis.

  10. Multiple scattering effects on the Linear Depolarization Ratio (LDR) measured during CaPE by a Ka-band air-borne radar

    Iguchi, Toshio; Meneghini, Robert

    1993-01-01

    Air-borne radar measurements of thunderstorms were made as part of the CaPE (Convection and Precipitation/Electrification) experiment in Florida in July 1991. The radar has two channels, X-band (10 GHz) and Ka-band (34.5 GHz), and is capable of measuring cross-polarized returns as well as co-polarized returns. In stratiform rain, the cross-polarized components can be observed only at the bright band region and from the surface reflection. The linear depolarization ratios (LDR's) measured at X-band and Ka-band at the bright band are nearly equal. In convective rain, however, the LDR in Ka-band often exceeds the X-band LDR by several dB, and sometimes by more than 10 dB, reaching LDR values of up to -5 dB over heavy convective rain. For randomly oriented hydrometeors, such high LDR values cannot be explained by single scattering from non-spherical scattering particles alone. Because the LDR by single backscatter depends weakly on the wavelength, the difference between the Ka-band and X-band LDR's suggests that multiple scattering effects prevail in the Ka-band LDR. In order to test this inference, the magnitude of the cross-polarized component created by double scattering was calculated using the parameters of the airborne radar, which for both frequencies has beamwidths of 5.1 degrees and pulse widths of 0.5 microsecond. Uniform rain beyond the range of 3 km is assumed.

  11. Spin rotation and depolarization of high-energy particles in crystals at Hadron Collider (LHC) and Future Circular Collider (FCC) energies and the possibility to measure the anomalous magnetic moments of short-lived particles

    Baryshevsky, V.G.

    2015-01-01

    We study the phenomena of spin rotation and depolarization of high-energy particles in crystals in the range of high energies that will be available at Hadron Collider (LHC) and Future Circular Collider (FCC). It is shown that these phenomena can be used to measure the anomalous magnetic moments of short-lived particles in this range of energies. We also demonstrate that the phenomenon of particle spin depolarization in crystals provides a unique possibility of measuring the anomalous magnetic moment of negatively-charged particles (e.g., beauty baryons), for which the channeling effect is hampered due to far more rapid dechanneling as compared to that for positively-charged particles. Channeling of particles in either straight or bent crystals with polarized nuclei could be used for polarization and the analysis thereof of high-energy particles.

  12. Measurement of cell volume changes by fluorescence self-quenching

    Hamann, Steffen; Kiilgaard, J.F.; Litman, Thomas

    2002-01-01

    At high concentrations, certain fluorophores undergo self-quenching, i.e., fluorescence intensity decreases with increasing fluorophore concentration. Accordingly, the self-quenching properties can be used for measuring water volume changes in lipid vesicles. In cells, quantitative determination...... concentrations of the fluorophore calcein suitable for measurement of changes in cell water volume by self-quenching. The relationship between calcein fluorescence intensity, when excited at 490 nm (its excitation maximum), and calcein concentration was investigated in vitro and in various cultured cell types...... to a decrease in calcein fluorescence with high signal-to-noise ratio (>15). Similar results were obtained with the fluorophore BCECF when excited at its isosbestic wavelength (436 nm). The present results demonstrate the usefulness of fluorescence self-quenching to measure rapid changes in cell water volume....

  13. Measuring and sorting cell populations expressing isospectral fluorescent proteins with different fluorescence lifetimes.

    Bryan Sands

    Full Text Available Study of signal transduction in live cells benefits from the ability to visualize and quantify light emitted by fluorescent proteins (XFPs fused to different signaling proteins. However, because cell signaling proteins are often present in small numbers, and because the XFPs themselves are poor fluorophores, the amount of emitted light, and the observable signal in these studies, is often small. An XFP's fluorescence lifetime contains additional information about the immediate environment of the fluorophore that can augment the information from its weak light signal. Here, we constructed and expressed in Saccharomyces cerevisiae variants of Teal Fluorescent Protein (TFP and Citrine that were isospectral but had shorter fluorescence lifetimes, ∼ 1.5 ns vs ∼ 3 ns. We modified microscopic and flow cytometric instruments to measure fluorescence lifetimes in live cells. We developed digital hardware and a measure of lifetime called a "pseudophasor" that we could compute quickly enough to permit sorting by lifetime in flow. We used these abilities to sort mixtures of cells expressing TFP and the short-lifetime TFP variant into subpopulations that were respectively 97% and 94% pure. This work demonstrates the feasibility of using information about fluorescence lifetime to help quantify cell signaling in living cells at the high throughput provided by flow cytometry. Moreover, it demonstrates the feasibility of isolating and recovering subpopulations of cells with different XFP lifetimes for subsequent experimentation.

  14. Depolarization artifacts in dual rotating-compensator Mueller matrix ellipsometry

    Li, Weiqi; Zhang, Chuanwei; Jiang, Hao; Chen, Xiuguo; Liu, Shiyuan

    2016-01-01

    Noticeable depolarization effects are observed in the measurement of the air using an in-house developed dual rotating-compensator Mueller matrix ellipsometer. We demonstrate that these depolarization effects are essentially artifacts and mainly induced when the compensator with wavelength-dependent optical properties is integrated with the finite bandwidth detector. We define a general formula to represent the actual Mueller matrix of the compensator by taking into account the depolarization artifacts. After incorporating this formula into the system model, a correction method is further proposed, and consequently, improved accuracy can be achieved in the Mueller matrix measurement. (paper)

  15. Measurement of neuron soma size by fluorescent Nissl stain

    sprotocols

    2015-01-01

    Authors: James Cronk, Noel Derecki & Jonathan Kipnis ### Abstract This protocol describes how to measure neuron soma size by fluorescent Nissl stain. Mice are sacrificed, and fixed by PFA perfusion. Brains are removed, and further PFA fixed, followed by sucrose cryoprotection. They are then snap frozen, sliced by cryostat, and stained with fluorescent Nissl as floating sections. Confocal microscopy is used to take images of neurons, and a computer graphics tablet is used to calculate ...

  16. Neutron depolarization in compressed ferrite powders

    Rekveldt, M.Th.; Kraan, W.H.

    1976-01-01

    The polarization change of a polarized neutron beam after transmission through a partly magnetized ferromagnetic material can be described by a (3x3) depolarization matrix. This matrix can be expressed in terms of domain quantities such as the reduced mean magnetization M, the mean domain size delta and the mean square direction cosinus γsub(y) of the inner magnetization within the domain, and can be used for measuring magnetic properties of ferromagnetic materials. In the underlying depolarization theory it is assumed that no correlations exist between the direction of the spontaneous magnetization Bs in neighbouring domains, and between the direction of Bs and the individual domain sizes. In order to extend the measuring method for ferromagnetic materials, measurements have been made with different compressed ferrite powders assuming that the mean domain size is equal to the mean particle size. The neutron depolarization matrix is measured as a function of an alternative external magnetic field and interpreted in terms of m, γsub(y), and delta. The possibilities and limitations of the measuring method are discussed

  17. Breast cancer: in vitro measurements of native fluorescence

    Lohmann, Wolfgang; Bohle, Rainer M.; Dreyer, Thomas; Haas, Sabine; Wallenfels, Heike; Schwemmle, Konrad; Schill, Wolf-Bernhard

    1996-12-01

    Unfixed, HE stained cryosections of breast tissue obtained from 67 patients during surgery were illuminated with 395 - 440 nm and their fluorescence response as well as the 2- dimensional fluorophore distribution were measured. The histological evaluation of the same cryosection, illuminated as usual with a transmitted light obtained from a halogen lamp, revealed 9 patients with healthy tissue, 11 with benign epithelial hyperplasia, 4 with ductal carcinoma in situ, 35 with invasive ductal carcinoma, 7 with invasive lobular carcinoma, and one with invasive tubular carcinoma. A comparison between the fluorescence and the HE images shows that both match very nicely and that the fluorescence images are also characteristic for the different pathological condition of the biopsy sample. Moreover, benign tumors e.g. fibroadenomas, exhibit a fluorescence response different from cancer and healthy tissue.

  18. Measuring and interpreting X-ray fluorescence from planetary surfaces.

    Owens, Alan; Beckhoff, Burkhard; Fraser, George; Kolbe, Michael; Krumrey, Michael; Mantero, Alfonso; Mantler, Michael; Peacock, Anthony; Pia, Maria-Grazia; Pullan, Derek; Schneider, Uwe G; Ulm, Gerhard

    2008-11-15

    As part of a comprehensive study of X-ray emission from planetary surfaces and in particular the planet Mercury, we have measured fluorescent radiation from a number of planetary analog rock samples using monochromatized synchrotron radiation provided by the BESSY II electron storage ring. The experiments were carried out using a purpose built X-ray fluorescence (XRF) spectrometer chamber developed by the Physikalisch-Technische Bundesanstalt, Germany's national metrology institute. The XRF instrumentation is absolutely calibrated and allows for reference-free quantitation of rock sample composition, taking into account secondary photon- and electron-induced enhancement effects. The fluorescence data, in turn, have been used to validate a planetary fluorescence simulation tool based on the GEANT4 transport code. This simulation can be used as a mission analysis tool to predict the time-dependent orbital XRF spectral distributions from planetary surfaces throughout the mapping phase.

  19. μ+ depolarization in AlGd alloys

    Kohn, S.; Brown, J.A.; Heffner, R.H.; Huang, C.Y.; Kitchens, T.A. Jr.; Leon, M.; Olsen, C.E.; Schillaci, M.E.

    1979-01-01

    The μ + depolarization rate in dilute AlGd alloys containing 50 and 450 atomic ppm Gd was measured in a transverse field of 80 Oe over the temperature range 6-300 K. For both alloys, Λ increased dramatically above 200 K, reaching values of 0.69 and 0.93 μs -1 , respectively, near room temperature. The results are interpreted as providing evidence for a thermally-activated trapping mechanism. (Auth.)

  20. Stitching Type Large Aperture Depolarizer for Gas Monitoring Imaging Spectrometer

    Liu, X.; Li, M.; An, N.; Zhang, T.; Cao, G.; Cheng, S.

    2018-04-01

    To increase the accuracy of radiation measurement for gas monitoring imaging spectrometer, it is necessary to achieve high levels of depolarization of the incoming beam. The preferred method in space instrument is to introduce the depolarizer into the optical system. It is a combination device of birefringence crystal wedges. Limited to the actual diameter of the crystal, the traditional depolarizer cannot be used in the large aperture imaging spectrometer (greater than 100 mm). In this paper, a stitching type depolarizer is presented. The design theory and numerical calculation model for dual babinet depolarizer were built. As required radiometric accuracies of the imaging spectrometer with 250 mm × 46 mm aperture, a stitching type dual babinet depolarizer was design in detail. Based on designing the optimum structural parmeters the tolerance of wedge angle refractive index, and central thickness were given. The analysis results show that the maximum residual polarization degree of output light from depolarizer is less than 2 %. The design requirements of polarization sensitivity is satisfied.

  1. STITCHING TYPE LARGE APERTURE DEPOLARIZER FOR GAS MONITORING IMAGING SPECTROMETER

    X. Liu

    2018-04-01

    Full Text Available To increase the accuracy of radiation measurement for gas monitoring imaging spectrometer, it is necessary to achieve high levels of depolarization of the incoming beam. The preferred method in space instrument is to introduce the depolarizer into the optical system. It is a combination device of birefringence crystal wedges. Limited to the actual diameter of the crystal, the traditional depolarizer cannot be used in the large aperture imaging spectrometer (greater than 100 mm. In this paper, a stitching type depolarizer is presented. The design theory and numerical calculation model for dual babinet depolarizer were built. As required radiometric accuracies of the imaging spectrometer with 250 mm × 46 mm aperture, a stitching type dual babinet depolarizer was design in detail. Based on designing the optimum structural parmeters,the tolerance of wedge angle,refractive index, and central thickness were given. The analysis results show that the maximum residual polarization degree of output light from depolarizer is less than 2 %. The design requirements of polarization sensitivity is satisfied.

  2. Correction of Depolarizing Resonances in ELSA

    Steier, C.; Husmann, D.

    1997-05-01

    The 3.5 GeV electron stretcherring ELSA (ELectron Stretcher Accelerator) at Bonn University is operational since 1987, both as a continuous beam facility for external fixed target experiments and as a partially dedicated synchrotron light source. For the external experiments an upgrade to polarized electrons is under way. One source of polarized electrons (GaAs crystal, photoeffect using circular polarized laser light) is operational. The studies of minimizing the losses in polarization degree due to crossing of depolarizing resonances that necessarily exist in circular accelerators (storagerings) just started recently. Calculations concerning different correction schemes for the depolarizing resonances in ELSA are presented, and first results of measurements are shown (done by means of a Møller polarimeter in one of the external beamlines).

  3. Mercury mass measurement in fluorescent lamps via neutron activation analysis

    Viererbl, L.; Vinš, M.; Lahodová, Z.; Fuksa, A.; Kučera, J.; Koleška, M.; Voljanskij, A.

    2015-11-01

    Mercury is an essential component of fluorescent lamps. Not all fluorescent lamps are recycled, resulting in contamination of the environment with toxic mercury, making measurement of the mercury mass used in fluorescent lamps important. Mercury mass measurement of lamps via instrumental neutron activation analysis (NAA) was tested under various conditions in the LVR-15 research reactor. Fluorescent lamps were irradiated in different positions in vertical irradiation channels and a horizontal channel in neutron fields with total fluence rates from 3×108 cm-2 s-1 to 1014 cm-2 s-1. The 202Hg(n,γ)203Hg nuclear reaction was used for mercury mass evaluation. Activities of 203Hg and others induced radionuclides were measured via gamma spectrometry with an HPGe detector at various times after irradiation. Standards containing an Hg2Cl2 compound were used to determine mercury mass. Problems arise from the presence of elements with a large effective cross section in luminescent material (europium, antimony and gadolinium) and glass (boron). The paper describes optimization of the NAA procedure in the LVR-15 research reactor with particular attention to influence of neutron self-absorption in fluorescent lamps.

  4. Compton effect thermally activated depolarization dosimeter

    Moran, Paul R.

    1978-01-01

    A dosimetry technique for high-energy gamma radiation or X-radiation employs the Compton effect in conjunction with radiation-induced thermally activated depolarization phenomena. A dielectric material is disposed between two electrodes which are electrically short circuited to produce a dosimeter which is then exposed to the gamma or X radiation. The gamma or X-radiation impinging on the dosimeter interacts with the dielectric material directly or with the metal composing the electrode to produce Compton electrons which are emitted preferentially in the direction in which the radiation was traveling. A portion of these electrons becomes trapped in the dielectric material, consequently inducing a stable electrical polarization in the dielectric material. Subsequent heating of the exposed dosimeter to the point of onset of ionic conductivity with the electrodes still shorted through an ammeter causes the dielectric material to depolarize, and the depolarization signal so emitted can be measured and is proportional to the dose of radiation received by the dosimeter.

  5. Mercury mass measurement in fluorescent lamps via neutron activation analysis

    Viererbl, L.; Vinš, M.; Lahodová, Z.; Fuksa, A.; Kučera, Jan; Koleska, M.; Voljanskij, A.

    2015-01-01

    Roč. 116, NOV (2015), s. 56-59 ISSN 0969-806X R&D Projects: GA TA ČR TA01010237; GA MŠk LM2011019 Institutional support: RVO:61389005 Keywords : fluorescent lamp * mercury measurement * neutron activation analysis * research reactor Subject RIV: BG - Nuclear , Atomic and Molecular Physics, Colliders Impact factor: 1.207, year: 2015

  6. Kr II laser-induced fluorescence for measuring plasma acceleration.

    Hargus, W A; Azarnia, G M; Nakles, M R

    2012-10-01

    We present the application of laser-induced fluorescence of singly ionized krypton as a diagnostic technique for quantifying the electrostatic acceleration within the discharge of a laboratory cross-field plasma accelerator also known as a Hall effect thruster, which has heritage as spacecraft propulsion. The 728.98 nm Kr II transition from the metastable 5d(4)D(7/2) to the 5p(4)P(5/2)(∘) state was used for the measurement of laser-induced fluorescence within the plasma discharge. From these measurements, it is possible to measure velocity as krypton ions are accelerated from near rest to approximately 21 km/s (190 eV). Ion temperature and the ion velocity distributions may also be extracted from the fluorescence data since available hyperfine splitting data allow for the Kr II 5d(4)D(7/2)-5p(4)P(5/2)(∘) transition lineshape to be modeled. From the analysis, the fluorescence lineshape appears to be a reasonable estimate for the relatively broad ion velocity distributions. However, due to an apparent overlap of the ion creation and acceleration regions within the discharge, the distributed velocity distributions increase ion temperature determination uncertainty significantly. Using the most probable ion velocity as a representative, or characteristic, measure of the ion acceleration, overall propellant energy deposition, and effective electric fields may be calculated. With this diagnostic technique, it is possible to nonintrusively characterize the ion acceleration both within the discharge and in the plume.

  7. Instantaneous temperature field measurements using planar laser-induced fluorescence.

    Seitzman, J M; Kychakoff, G; Hanson, R K

    1985-09-01

    A single-pulse, laser-induced-fluorescence diagnostic for the measurement of two-dimensional temperature fields in combustion flows is described. The method uses sheet illumination from a tunable laser to excite planar laserinduced fluorescence in a stable tracer molecule, seeded at constant mole fraction into the flow field. The temporal resolution of this technique is determined by the laser pulse length. Experimental results are presented for a rodstabilized, premixed methane-air flame, using the Q(1) (22) line of the nitric oxide A(2) Sigma(+) (v = 0) ? X(2)II((1/2))(v = 0) transition (lambda approximately 225.6 nm).

  8. Lidar measurements of boundary layer depolarization and CCSEM-EDX compositional analysis of airborne particles on collocated passive samplers throughout the forest canopy during the 2016 airborne pollen season at UMBS, Pellston, MI

    Wozniak, M. C.; Steiner, A.; Ault, A. P.; Kort, E. A.; Lersch, T.; Casuccio, G.

    2017-12-01

    Observations of airborne pollen are typically made with volumetric samplers that obtain a time-averaged pollen concentration at a single point. While spatial variations in surface pollen concentrations may be known with these samplers given multiple sampling sites, real-time boundary layer transport of pollen grains cannot be determined except by particle dispersion or tracer transport models. Recently, light detection and ranging (lidar) techniques, such as depolarization, have been used to measure pollen transport and optical properties throughout the boundary layer over time. Here, we use a ground-based micro-pulse lidar (MPL) to observe boundary layer vertical profiles before, during and after the peak anemophilous (wind-driven) pollen season. The lidar depolarization ratio is measured in tandem with the normalized R-squared backscatter (NRB) intensity to determine the contribution of aspherical particles to the scatterers present throughout the boundary layer. Measurements are taken from April 15 - July 12, 2016 at the University of Michigan Biological Station (UMBS) PROPHET outdoor research lab and tower within a largely forested region. UMBS is dominated by Acer rubrum, Betula papyrifera, Pinus resinosa, Quercus rubra and Pinus strobus, all of which began flowering on 4/19, 5/3, 5/25, 5/25 and 6/14, respectively. Temperature, relative humidity and wind speed measured on site determine daytime conditions conducive to pollen dispersion from flowers. Lidar depolarization ratios between 0.08-0.14 and higher are observed in the daytime boundary layer on days shortly after the flowering dates of the aforementioned species, elevated above the background level of 0.06 or less. Lidar observations are supplemented with aerosol compositional analysis determined by computer-controlled scanning electron microscopy and energy-dispersive X-ray spectroscopy (CCSEM-EDX) on passive sampler data from below, within and above the forest canopy at PROPHET tower. Particles are

  9. Fluorescence quantum yield measurements of fluorescent proteins: a laboratory experiment for a biochemistry or molecular biophysics laboratory course.

    Wall, Kathryn P; Dillon, Rebecca; Knowles, Michelle K

    2015-01-01

    Fluorescent proteins are commonly used in cell biology to assess where proteins are within a cell as a function of time and provide insight into intracellular protein function. However, the usefulness of a fluorescent protein depends directly on the quantum yield. The quantum yield relates the efficiency at which a fluorescent molecule converts absorbed photons into emitted photons and it is necessary to know for assessing what fluorescent protein is the most appropriate for a particular application. In this work, we have designed an upper-level, biochemistry laboratory experiment where students measure the fluorescence quantum yields of fluorescent proteins relative to a standard organic dye. Four fluorescent protein variants, enhanced cyan fluorescent protein (ECFP), enhanced green fluorescent protein (EGFP), mCitrine, and mCherry, were used, however the methods described are useful for the characterization of any fluorescent protein or could be expanded to fluorescent quantum yield measurements of organic dye molecules. The laboratory is designed as a guided inquiry project and takes two, 4 hr laboratory periods. During the first day students design the experiment by selecting the excitation wavelength, choosing the standard, and determining the concentration needed for the quantum yield experiment that takes place in the second laboratory period. Overall, this laboratory provides students with a guided inquiry learning experience and introduces concepts of fluorescence biophysics into a biochemistry laboratory curriculum. © 2014 The International Union of Biochemistry and Molecular Biology.

  10. Chiral Recognition by Fluorescence: One Measurement for Two Parameters

    Shanshan Yu

    2014-01-01

    Full Text Available This outlook describes two strategies to simultaneously determine the enantiomeric composition and concentration of a chiral substrate by a single fluorescent measurement. One strategy utilizes a pseudoenantiomeric sensor pair that is composed of a 1,1′-bi-2-naphthol-based amino alcohol and a partially hydrogenated 1,1′-bi-2-naphthol-based amino alcohol. These two molecules have the opposite chiral configuration with fluorescent enhancement at two different emitting wavelengths when treated with the enantiomers of mandelic acid. Using the sum and difference of the fluorescent intensity at the two wavelengths allows simultaneous determination of both concentration and enantiomeric composition of the chiral acid. The other strategy employs a 1,1′-bi-2-naphthol-based trifluoromethyl ketone that exhibits fluorescent enhancement at two emission wavelengths upon interaction with a chiral diamine. One emission responds mostly to the concentration of the chiral diamine and the ratio of the two emissions depends on the chiral configuration of the enantiomer but independent of the concentration, allowing both the concentration and enantiomeric composition of the chiral diamine to be simultaneously determined. These strategies would significantly simplify the practical application of the enantioselective fluorescent sensors in high-throughput chiral assay.

  11. Connecting active to passive fluorescence with photosynthesis: a method for evaluating remote sensing measurements of Chl fluorescence.

    Magney, Troy S; Frankenberg, Christian; Fisher, Joshua B; Sun, Ying; North, Gretchen B; Davis, Thomas S; Kornfeld, Ari; Siebke, Katharina

    2017-09-01

    Recent advances in the retrieval of Chl fluorescence from space using passive methods (solar-induced Chl fluorescence, SIF) promise improved mapping of plant photosynthesis globally. However, unresolved issues related to the spatial, spectral, and temporal dynamics of vegetation fluorescence complicate our ability to interpret SIF measurements. We developed an instrument to measure leaf-level gas exchange simultaneously with pulse-amplitude modulation (PAM) and spectrally resolved fluorescence over the same field of view - allowing us to investigate the relationships between active and passive fluorescence with photosynthesis. Strongly correlated, slope-dependent relationships were observed between measured spectra across all wavelengths (F λ , 670-850 nm) and PAM fluorescence parameters under a range of actinic light intensities (steady-state fluorescence yields, F t ) and saturation pulses (maximal fluorescence yields, F m ). Our results suggest that this method can accurately reproduce the full Chl emission spectra - capturing the spectral dynamics associated with changes in the yields of fluorescence, photochemical (ΦPSII), and nonphotochemical quenching (NPQ). We discuss how this method may establish a link between photosynthetic capacity and the mechanistic drivers of wavelength-specific fluorescence emission during changes in environmental conditions (light, temperature, humidity). Our emphasis is on future research directions linking spectral fluorescence to photosynthesis, ΦPSII, and NPQ. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  12. Integrated optical measurement system for fluorescence spectroscopy in microfluidic channels

    Hübner, Jörg; Mogensen, Klaus Bo; Jørgensen, Anders Michael

    2001-01-01

    A transportable miniaturized fiber-pigtailed measurement system is presented which allows quantitative fluorescence detection in microliquid handling systems. The microliquid handling chips are made in silica on silicon technology and the optical functionality is monolithically integrated with th...... with two dyes, fluorescein, and Bodipy 650/665 X, showed good linear behavior over a wide range of concentrations. Minimally detected concentrations were 250 pM for fluorescein and 100 nM for Bodipy....

  13. Application of Σ-ΔADC in fluorescence measurement

    Hao Yan; Chen Ziyu; Shen Ji

    2011-01-01

    It introduces the measurement system of fluorescence intensity, the Σ-ΔADC used as its core components. The system consisted of ADS1255, microcontrollers LPC2368 devices, etc. LPC2368 is used as the control, data process and communication interface. Diagram of the system is given. The linear response experiments, frequency response experiments, measurement accuracy experiments and long-time stability experiments were carried out. Experiments show that the system reaches a good linear response, and the measurement accuracy reaches up to 0.01%. (authors)

  14. Nanoscale measurements of proton tracks using fluorescent nuclear track detectors

    Sawakuchi, Gabriel O., E-mail: gsawakuchi@mdanderson.org; Sahoo, Narayan [Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030 and Graduate School of Biomedical Sciences, The University of Texas, Houston, Texas 77030 (United States); Ferreira, Felisberto A. [Department of Nuclear Physics, University of Sao Paulo, SP 05508-090 (Brazil); McFadden, Conor H. [Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030 (United States); Hallacy, Timothy M. [Biophysics Program, Harvard University, Cambridge, Massachusetts 02138 (United States); Granville, Dal A. [Department of Medical Physics, The Ottawa Hospital Cancer Centre, Ottawa, Ontario K1H 8L6 (Canada); Akselrod, Mark S. [Crystal Growth Division, Landauer, Inc., Stillwater, Oklahoma 74074 (United States)

    2016-05-15

    Purpose: The authors describe a method in which fluorescence nuclear track detectors (FNTDs), novel track detectors with nanoscale spatial resolution, are used to determine the linear energy transfer (LET) of individual proton tracks from proton therapy beams by allowing visualization and 3D reconstruction of such tracks. Methods: FNTDs were exposed to proton therapy beams with nominal energies ranging from 100 to 250 MeV. Proton track images were then recorded by confocal microscopy of the FNTDs. Proton tracks in the FNTD images were fit by using a Gaussian function to extract fluorescence amplitudes. Histograms of fluorescence amplitudes were then compared with LET spectra. Results: The authors successfully used FNTDs to register individual proton tracks from high-energy proton therapy beams, allowing reconstruction of 3D images of proton tracks along with delta rays. The track amplitudes from FNTDs could be used to parameterize LET spectra, allowing the LET of individual proton tracks from therapeutic proton beams to be determined. Conclusions: FNTDs can be used to directly visualize proton tracks and their delta rays at the nanoscale level. Because the track intensities in the FNTDs correlate with LET, they could be used further to measure LET of individual proton tracks. This method may be useful for measuring nanoscale radiation quantities and for measuring the LET of individual proton tracks in radiation biology experiments.

  15. Measurement of in vitro microtubule polymerization by turbidity and fluorescence.

    Mirigian, Matthew; Mukherjee, Kamalika; Bane, Susan L; Sackett, Dan L

    2013-01-01

    Tubulin polymerization may be conveniently monitored by the increase in turbidity (optical density, or OD) or by the increase in fluorescence intensity of diamidino-phenylindole. The resulting data can be a quantitative measure of microtubule (MT) assembly, but some care is needed in interpretation, especially of OD data. Buffer formulations used for the assembly reaction significantly influence the polymerization, both by altering the critical concentration for polymerization and by altering the exact polymer produced-for example, by increasing the production of sheet polymers in addition to MT. Both the turbidity and the fluorescence methods are useful for demonstrating the effect of MT-stabilizing or -destabilizing additives. 2013 Published by Elsevier Inc.

  16. DNA conformation on surfaces measured by fluorescence self-interference.

    Moiseev, Lev; Unlü, M Selim; Swan, Anna K; Goldberg, Bennett B; Cantor, Charles R

    2006-02-21

    The conformation of DNA molecules tethered to the surface of a microarray may significantly affect the efficiency of hybridization. Although a number of methods have been applied to determine the structure of the DNA layer, they are not very sensitive to variations in the shape of DNA molecules. Here we describe the application of an interferometric technique called spectral self-interference fluorescence microscopy to the precise measurement of the average location of a fluorescent label in a DNA layer relative to the surface and thus determine specific information on the conformation of the surface-bound DNA molecules. Using spectral self-interference fluorescence microscopy, we have estimated the shape of coiled single-stranded DNA, the average tilt of double-stranded DNA of different lengths, and the amount of hybridization. The data provide important proofs of concept for the capabilities of novel optical surface analytical methods of the molecular disposition of DNA on surfaces. The determination of DNA conformations on surfaces and hybridization behavior provide information required to move DNA interfacial applications forward and thus impact emerging clinical and biotechnological fields.

  17. Layer thickness measurement using the X-ray fluorescence principle

    Mengelkamp, B.

    1980-01-01

    Curium 244 having a gamma energy of about 15.5 keV is used as excitation emitter for contactless and continuous measuring of the thickness of metallic layers on iron strip. Soft gamma radiation is absorbed in matter according to the photo effect, so that X-ray fluorescence radiation is generated in the matter, which depends on the element and is radiated to all sides. For instance, it amounts for iron 6.4 keV and is measured with a specific ionisation chamber for this energy range. With increasing atomic number of the elements, the energy of fluorescence radiation increases and hence also the emission signal of the detector. The prerequisite for a usable measuring effect is an element distance of at least two and the thickness of the layer to be measured being in an optimum range. A signal dependent on the thickness of the layer is produced either by absorption of iron radiation (absorption method - aluminium and tin) or by build-up radiation of the material of the layer (emission method - zinc and lead). (orig./GSCH) [de

  18. Containerless high temperature property measurements by atomic fluorescence

    Schiffman, R. A.; Walker, C. A.

    1984-01-01

    Laser induced fluorescence (LIF) techniques for containerless study of high temperature processes and material properties was studied. Gas jet and electromagnetic levitation and electromagnetic and laser heating techniques are used with LIF in earth-based containerless high temperature experiments. Included are the development of an apparatus and its use in the studies of (1) chemical reactions on Al2O3, molybdenum, tungsten and LaB6 specimens, (2) methods for noncontact specimen temperature measurement, (3) levitation jet properties and (4) radiative lifetime and collisional energy transfer rates for electronically excited atoms.

  19. Measurement and microscopic analysis of the 11B(p,p) reaction at Ep = 150 MeV. Part II: Depolarization of elastic scattering on an odd-A nucleus

    Hannen, V.M.; Van den Berg, A.M.; Bieber, R.K.; Harakeh, M.N.; De Huu, M.A.; Kruesemann, B.A.M.; Van der Werf, S.Y.; Woertche, H.J.; Amos, K.; Deb, P.K.; Ellinghaus, F.; Frekers, D.; Rakers, S.; Schmidt, R.; Hayse, J.

    2001-01-01

    The depolarization parameter D nn ' in elastic proton scattering off 11 B at an energy of 150 MeV has been measured in the angular range 5 deg nn ' from unity were observed starting around a center-of-mass angle of 23 deg. The observed angular distribution of D nn ' will be described in the framework of a fully microscopic distorted-wave analysis using a folding potential to generate distorted waves from the nuclear ground-state density and from a recent density-dependent parameterization of the effective nucleon-nucleon interaction. The same kind of analysis has been applied to datasets of D nn ' in elastic scattering off 13 C and off 15 N which are available in the literature. The agreement of the fully microscopic analysis with the data is comparable or, in the case of 11 B, slightly better than what is achieved with the conventional calculations

  20. FLEX: an imaging spectrometer for measurement of vegetation fluorescence

    Smorenburg, Kees; Visser, Huib; Court, Andrew; Stoll, Marc Ph.

    2017-11-01

    Detection of vegetation fluorescence gives information about plant functioning, stress and vitality. During the past decades several ground based laser fluorosensors have been developed to investigate these processes and to demonstrate the value of this technique. FLEX (= FLuorescense EXplorer) is a space mission to measure the fluorescence of vegetation on earth over large areas from space. Such a mission would greatly improve the understanding and enhance the capability to quantify e.g. the role of terrestrial vegetation in global carbon sequestration. Because the fluorescence signal, which is excited by solar irradiation is low with respect to the reflected sunlight the signal from a satellite is proposed to be measured in the solar Fraunhofer lines, where the reflection signal is much reduced. The heart of FLEX is a high resolution imaging spectrometer with 2 channels: channel 1 around the Fraunhofer lines at ‡ = 397 nm, ‡= 423 nm and/or ‡ = 434 nm and channel 2 around the Fraunhofer line at ‡ = 656 nm. The required spectral resolution will depend on the linewidth (0.02-0.3 nm). A first definition of the field of view is 8.4 degrees, leading from an 800 km satellite altitude to a swath of about 120 km. For detection a 1024x1024 pixel frame transfer CCD detector is proposed, with a pixel dimension of 13 x 13 ‡ mm2. The maximum footprint is about 500x500m2. The optical configuration contains a scan mirror for solar calibration, for pointing the FOV in swath direction and for freezing the observed ground scene up to a few seconds to increase the signal to noise performance. At this moment the concept of FLEX is elaborated in a feasibility study. Both the scientific and instrument requirements are updated and the concept is studied in detail. Besides a development plan for FLEX is made. In this paper the idea and the headlines of FLEX are described.

  1. Depolarization on Earth-space paths

    1981-01-01

    Sources of depolarization effects on the propagation paths of orthogonally-polarized information channels are considered. The main sources of depolarization at millimeter wave frequencies are hydrometeor absorption and scattering in the troposphere. Terms are defined. Mathematical formulations for the effects of the propagation medium characteristics and antenna performance on signals in dual polarization Earth-space links are presented. Techniques for modeling rain and ice depolarization are discussed.

  2. Quantitative laser-induced fluorescence measurements of nitric oxide in a heavy-duty Diesel engine

    Verbiezen, K.; Klein-Douwel, R. J. H.; van Viet, A. P.; Donkerbroek, A. J.; Meerts, W. L.; Dam, N. J.; ter Meulen, J. J.

    2007-01-01

    We present quantitative, in-cylinder, UV-laser-induced fluorescence measurements of nitric oxide in a heavy-duty Diesel engine. Processing of the raw fluorescence signals includes a detailed correction, based on additional measurements, for the effect of laser beam and fluorescence attenuation, and

  3. Spectrally resolved pressure dependence measurements of air fluorescence emission with AIRFLY

    Ave, M.; Bohacova, M.; Buonomo, B.; Busca, N.; Cazon, L.; Chemerisov, S.D.; Conde, M.E.; Crowell, R.A.; Di Carlo, P.; Di Giulio, C.; Doubrava, M.; Esposito, A.; Facal, P.; Franchini, F.J.; Hoerandel, J.; Hrabovsky, M.; Iarlori, M.; Kasprzyk, T.E.; Keilhauer, B.; Klages, H.

    2008-01-01

    The knowledge of the fluorescence emission as a function of atmospheric parameters is essential for the detection of extensive air showers with the fluorescence technique. In this paper, we summarize AIRFLY published measurements of the pressure dependence of the fluorescence yield. The spectral distribution of the fluorescent light between 280 and 429 nm has been measured with high resolution. Relative intensities of 34 spectral lines have been determined. The pressure dependence of 25 lines was measured in terms of quenching reference pressures p λ ' in air. This set of AIRFLY measurements yields the most comprehensive parametrization of the pressure dependence of the fluorescent spectrum.

  4. Light depolarization induced by metallic tips in apertureless near-field optical microscopy and tip-enhanced Raman spectroscopy

    Gucciardi, P G [CNR-Istituto per i Processi Chimico-Fisici, sezione Messina, Salita Sperone, Contrada Papardo, I-98158 Faro Superiore, Messina (Italy); Lopes, M; Deturche, R; Julien, C; Barchiesi, D; Chapelle, M Lamy de la [Institut Charles Delaunay-CNRS FRE 2848, Laboratoire de Nanotechnologie et d' Instrumentation Optique, Universite de Technologie de Troyes, 12 rue Marie Curie, BP2060, 10010 Troyes (France)

    2008-05-28

    We have investigated the depolarization effects of light scattered by sharp tips used for apertureless near-field optical microscopy. Dielectric and metal coated tips have been investigated and depolarization factors between 5 and 30% have been measured, changing as a function of the incident light polarization and of the tip shape. The experimental results are in good agreement with theoretical calculations performed by the finite element method, giving a near-field depolarization factor close to 10%. The effect of depolarization has been investigated in polarized tip-enhanced Raman spectroscopy (TERS) experiments; the depolarization gives rise to forbidden Raman modes in Si crystals.

  5. Rapid measurement of meat spoilage using fluorescence spectroscopy

    Wu, Binlin; Dahlberg, Kevin; Gao, Xin; Smith, Jason; Bailin, Jacob

    2017-02-01

    Food spoilage is mainly caused by microorganisms, such as bacteria. In this study, we measure the autofluorescence in meat samples longitudinally over a week in an attempt to develop a method to rapidly detect meat spoilage using fluorescence spectroscopy. Meat food is a biological tissue, which contains intrinsic fluorophores, such as tryptophan, collagen, nicotinamide adenine dinucleotide (NADH) and flavin adenine dinucleotide (FAD) etc. As meat spoils, it undergoes various morphological and chemical changes. The concentrations of the native fluorophores present in a sample may change. In particular, the changes in NADH and FAD are associated with microbial metabolism, which is the most important process of the bacteria in food spoilage. Such changes may be revealed by fluorescence spectroscopy and used to indicate the status of meat spoilage. Therefore, such native fluorophores may be unique, reliable and nonsubjective indicators for detection of spoiled meat. The results of the study show that the relative concentrations of all above fluorophores change as the meat samples kept in room temperature ( 19° C) spoil. The changes become more rapidly after about two days. For the meat samples kept in a freezer ( -12° C), the changes are much less or even unnoticeable over a-week-long storage.

  6. Twomey effect in subtropical stratocumulus clouds from UV depolarization lidar

    de Graaf, M.; Brown, Jessica; Donovan, D.P.; Nicolae, D.; Makoto, A.; Vassilis, A.; Balis, D.; Behrendt, A.; Comeron, A.; Gibert, F.; Landulfo, E.; McCormick, M.P.; Senff, C.; Veselovskii, I.; Wandinger, U.

    2018-01-01

    Marine stratocumulus clouds are important climate regulators, reflecting sunlight over a dark ocean background. A UV-depolarization lidar on Ascension, a small remote island in the south Atlantic, measured cloud droplet sizes and number concentration using an inversion method based on Monte Carlo

  7. A rotational diffusion coefficient of the 70s ribosome determined by depolarized laser light scattering

    Bruining, J.; Fijnaut, H.M.

    We have obtained a rotational diffusion coefficient of the 70S ribosome isolated from Escherichia-coli (MRE-600), from the depolarized light scattering spectrum measured by photon correlation spectroscopy. The intensity correlation function of depolarized scattered light contains contributions due

  8. Heterogeneous incidence and propagation of spreading depolarizations

    Kaufmann, Dan; Theriot, Jeremy J; Zyuzin, Jekaterina; Service, C Austin; Chang, Joshua C; Tang, Y Tanye; Bogdanov, Vladimir B; Multon, Sylvie; Schoenen, Jean; Ju, Y Sungtaek

    2016-01-01

    Spreading depolarizations are implicated in a diverse set of neurologic diseases. They are unusual forms of nervous system activity in that they propagate very slowly and approximately concentrically, apparently not respecting the anatomic, synaptic, functional, or vascular architecture of the brain. However, there is evidence that spreading depolarizations are not truly concentric, isotropic, or homogeneous, either in space or in time. Here we present evidence from KCl-induced spreading depolarizations, in mouse and rat, in vivo and in vitro, showing the great variability that these depolarizations can exhibit. This variability can help inform the mechanistic understanding of spreading depolarizations, and it has implications for their phenomenology in neurologic disease. PMID:27562866

  9. Interpretation of measurements of dynamic fluorescence of the eye

    Schweitzer, Dietrich; Hammer, Martin; Jentsch, Susanne; Schenke, Stefan

    2007-09-01

    First pathological alterations occur at cellular level, most in metabolism. An indirect estimation of metabolic activity in cells is measurement of microcirculation. Measurements of tissue autofluorescence are potentially suited for direct investigation of cellular metabolism. Besides redox pairs of co-enzymes (NADH-NAD, FADH2-FAD) several other fluorophores are excited in tissue. In addition, a number of anatomical structures are simultaneously excited, when investigating the eye-ground. In this study, spectral and time resolved comparison was performed between purified substances, single ocular structures and in vivo measurements of the time-resolved autofluorescence at the human eye. In human eyes, the ageing pigment lipofuscin covers other fluorophores at the fundus in long - wave visible range. Applying lifetime measurements, weakly emitting fluorophores can be detected, when the lifetimes are different from the strongly emitting fluorophore. For this, the autofluorescence was excited at 468 nm and detected in two spectral ranges (500 nm-560 nm, 560 nm-700 nm). In tri-exponential fitting, the short lifetime corresponds to retinal pigment epithelium, the mean lifetime corresponds probably to neural retina and the long lifetime is caused by fluorescence of connective tissue.

  10. Azadioxatriangulenium: exploring the effect of a 20 ns fluorescence lifetime in fluorescence anisotropy measurements

    Bogh, Sidsel A.; Bora, Ilkay; Rosenberg, Martin; Thyrhaug, Erling; Laursen, Bo W.; Just Sørensen, Thomas

    2015-12-01

    Azaoxatriangulenium (ADOTA) has been shown to be highly emissive despite a moderate molar absorption coefficient of the primary electronic transition. As a result, the fluorescence lifetime is ~20 ns, longer than all commonly used red fluorescent organic probes. The electronic transitions in ADOTA are highly polarised (r 0  =  0.38), which in combination with the long fluorescence lifetime extents the size-range of biomolecular weights that can be detected in fluorescence polarisation-based experiments. Here, the rotational dynamics of bovine serum albumin (BSA) are monitored with three different ADOTA derivatives, differing only in constitution of the reactive linker. A detailed study of the degree of labelling, the steady-state anisotropy, and the time-resolved anisotropy of the three different ADOTA-BSA conjugates are reported. The fluorescence quantum yields (ϕ fl) of the free dyes in PBS solution are determined to be ~55%, which is reduced to ~20% in the ADOTA-BSA conjugates. Despite the reduction in ϕ fl, a ~20 ns intensity averaged lifetime is maintained, allowing for the rotational dynamics of BSA to be monitored for up to 100 ns. Thus, ADOTA can be used in fluorescence polarisation assays to fill the gap between commonly used organic dyes and the long luminescence lifetime transition metal complexes. This allows for efficient steady-state fluorescence polarisation assays for detecting binding of analytes with molecular weights of up to 100 kDa.

  11. Quantitative analysis of fluorescence lifetime measurements of the macula using the fluorescence lifetime imaging ophthalmoscope in healthy subjects.

    Dysli, Chantal; Quellec, Gwénolé; Abegg, Mathias; Menke, Marcel N; Wolf-Schnurrbusch, Ute; Kowal, Jens; Blatz, Johannes; La Schiazza, Olivier; Leichtle, Alexander B; Wolf, Sebastian; Zinkernagel, Martin S

    2014-04-03

    Fundus autofluorescence (FAF) cannot only be characterized by the intensity or the emission spectrum, but also by its lifetime. As the lifetime of a fluorescent molecule is sensitive to its local microenvironment, this technique may provide more information than fundus autofluorescence imaging. We report here the characteristics and repeatability of FAF lifetime measurements of the human macula using a new fluorescence lifetime imaging ophthalmoscope (FLIO). A total of 31 healthy phakic subjects were included in this study with an age range from 22 to 61 years. For image acquisition, a fluorescence lifetime ophthalmoscope based on a Heidelberg Engineering Spectralis system was used. Fluorescence lifetime maps of the retina were recorded in a short- (498-560 nm) and a long- (560-720 nm) spectral channel. For quantification of fluorescence lifetimes a standard ETDRS grid was used. Mean fluorescence lifetimes were shortest in the fovea, with 208 picoseconds for the short-spectral channel and 239 picoseconds for the long-spectral channel, respectively. Fluorescence lifetimes increased from the central area to the outer ring of the ETDRS grid. The test-retest reliability of FLIO was very high for all ETDRS areas (Spearman's ρ = 0.80 for the short- and 0.97 for the long-spectral channel, P macula in healthy subjects. By using a custom-built software, we were able to quantify fluorescence lifetimes within the ETDRS grid. Establishing a clinically accessible standard against which to measure FAF lifetimes within the retina is a prerequisite for future studies in retinal disease.

  12. Fabry-Perot measurements of barium temperature in fluorescent lamps

    Hadrath, S; Garner, R

    2010-01-01

    A scanning Fabry-Perot interferometer (FPI) is used to determine the temperature of barium atoms that are liberated from the electrodes of fluorescent lamps during their steady-state operation. Barium, a constituent of the work function lowering emitter material that is placed on the tungsten coil that forms the electrode, is liberated primarily by evaporation from the hot (∼1300 K) thermionic electrode. However, there may be situations or modes of operation in which barium is, in addition, sputtered, a condition which may lead to increased end-darkening, shortened life and increased mercury consumption in the lamp. Using the FPI diagnostic, the occurrence of sputtering is inferred when barium temperatures are much greater than the electrode temperature. The FPI diagnostic senses resonance radiation (λ = 553 nm) emitted by barium atoms excited in the low pressure discharge environment, and infers temperature from the Doppler broadened linewidth. The diagnostic has proven to be successful in a number of situations. Measurements have been made on rare gas discharges and on Hg-argon discharges for different discharge currents, gas pressures and auxiliary coil currents. Measurements are phase resolved for ac-driven discharges.

  13. Quantum Stackelberg Duopoly Game in Depolarizing Channel

    Zhu Xia; Kuang Leman

    2008-01-01

    In this paper, we investigate the quantum Stackelberg duopoly (QSD) game in the noise environment with the depolarizing channel expressed by the Kraus-operator representation. It is found that the presence of the damping in the depolarizing channel always leads to the decrease of the quantities of the moves and payoffs of the two players in the QSD game. It is indicated that under certain conditions the first-mover advantage in the QSD game can be weakened due to the presence of the damping in the depolarizing channel.

  14. Spreading depolarizations have prolonged direct current shifts and are associated with poor outcome in brain trauma

    Hartings, Jed A; Watanabe, Tomas; Bullock, M Ross

    2011-01-01

    , although prolonged events have not been observed in animal models. To determine whether detrimental penumbral-type depolarizations occur in human brain trauma, we analysed electrocorticographic recordings obtained by subdural electrode-strip monitoring during intensive care. Of 53 patients studied, 10......Cortical spreading depolarizations occur spontaneously after ischaemic, haemorrhagic and traumatic brain injury. Their effects vary spatially and temporally as graded phenomena, from infarction to complete recovery, and are reflected in the duration of depolarization measured by the negative direct...... current shift of electrocorticographic recordings. In the focal ischaemic penumbra, peri-infarct depolarizations have prolonged direct current shifts and cause progressive recruitment of the penumbra into the core infarct. In traumatic brain injury, the effects of spreading depolarizations are unknown...

  15. Fluorescence measurements and perspectives with superconducting tunneling junctions (STJ)

    Baev, Ivan; Ruescher, Jan-Hendrik; Martins, Michael [Physics Department, University of Hamburg (Germany); Viefhaus, Jens [DESY Photon Science, Hamburg (Germany); Wurth, Wilfried [Physics Department, University of Hamburg (Germany); DESY Photon Science, Hamburg (Germany)

    2016-07-01

    The use of STJ's as absorber material for spectroscopic Soft X-Ray detection is very promising in terms of energy resolution and count rate capabilities. Because of the low excitation energy of Cooper pairs in a superconductor (few meV) three orders of magnitude more charge carriers than in a Si-detector are produced per photon. The ultimate resolution limit for such a detector is therefore in the order of a few eV instead of a few 100 eV in the soft X-ray regime. The first commercially available 36 pixel STJ detector is characterized and implemented into synchrotron radiation beamline operation. The achieved resolution is 10 eV for 500 eV photons and 50 eV for 1500 eV photons with a maximal count rate of 10 kcps per pixel. This allowed for element specific Soft X-Ray fluorescence measurements at the P04 beamline at Petra III, DESY.

  16. In situ Measurements of Phytoplankton Fluorescence Using Low Cost Electronics

    Dana L. Wright

    2013-06-01

    Full Text Available Chlorophyll a fluorometry has long been used as a method to study phytoplankton in the ocean. In situ fluorometry is used frequently in oceanography to provide depth-resolved estimates of phytoplankton biomass. However, the high price of commercially manufactured in situ fluorometers has made them unavailable to some individuals and institutions. Presented here is an investigation into building an in situ fluorometer using low cost electronics. The goal was to construct an easily reproducible in situ fluorometer from simple and widely available electronic components. The simplicity and modest cost of the sensor makes it valuable to students and professionals alike. Open source sharing of architecture and software will allow students to reconstruct and customize the sensor on a small budget. Research applications that require numerous in situ fluorometers or expendable fluorometers can also benefit from this study. The sensor costs US$150.00 and can be constructed with little to no previous experience. The sensor uses a blue LED to excite chlorophyll a and measures fluorescence using a silicon photodiode. The sensor is controlled by an Arduino microcontroller that also serves as a data logger.

  17. Laser induced fluorescence measurements of the mixing of fuel oil with air

    Arnold, A; Bombach, R; Hubschmid, W; Kaeppeli, B [Paul Scherrer Inst. (PSI), Villigen (Switzerland)

    1999-08-01

    We report on measurements of the mixing of fuel oil with air at atmospheric pressure in an industrial premixed gas turbine burner. The concentration of the vaporized fuel oil was measured with laser induced fluorescence. We reason that the fuel oil concentration can be considered with good accuracy as proportional to the fluorescence intensity. (author) 6 fig., 3 refs.

  18. Measurement of L sub(III) subshell fluorescence yields in Pb, Th and U

    Arora, S K; Allawadhi, K L; Sood, B S [Punjabi Univ., Patiala (India). Nuclear Science Labs.

    1981-01-01

    L sub(III) subshell fluorescence yields in Pb, Th and U have been measured using photoionization for creating vacancies. The results have been compared with the available data and are found to agree with the recent measurements of Price made using K-L coincidence technique but higher than those of Stephenson made using fluorescent excitation of L sub(III) subshell.

  19. Measuring solar induced chlorophyll fluorescence (SIF) in the Amazon rainforest

    Kornfeld, A.; Stutz, J.; Berry, J. A.

    2016-12-01

    Measurement of solar induced chlorophyll fluorescence (SIF) has, in our hands, been fraught with missteps and puzzling problems. Here we describe lessons we have learned and the resulting novel system recently installed in the Amazon rainforest near Manaus, Brazil. The system is designed to measure light from 740 - 780 nm, enabling us to compare SIF computed from Fraunhofer lines in an optically transparent band of the atmosphere (745 - 759 nm) with SIF computed using the telluric O2A band (760 - 770 nm). Fraunhofer line analysis requires high optical resolution (better than 0.2 nm) to detect the relatively narrow lines, but we discovered that fiber-optic diffraction-grating spectrometers are sensitive to very small inhomogeneities in the lighting. Errors resulting from this autocorrelated but random noise were similar in magnitude to the SIF signal itself. Optical diffusers reduce this problem, leading to our final design: a sealed cylinder, dubbed Rotaprism, in which a rotatable prism selects whether light from upward- or downward-looking windows enters an axially-placed optical fiber. Cosine-correcting opal glass covering the windows not only solves the noise issue but also makes the measurements correspond to photon flux. Rotaprism also maximizes the amount of light reaching the spectrometer - maximizing the signal:noise ratio - by avoiding the need for lossy optical switches and fiber splitters. Rotaprism is driven by a pneumatic actuator that is controlled by electronic valves attached to a pressurized N2 source. The gas exhausts into the temperature-controlled spectrometer enclosure to help purge the optics. Finally, custom software provides fault-tolerant control and data acquisition, ensuring that measurements continue with little or no intervention at the remote field site despite unreliable power. Analysis of initial data demonstrates the advantage of Fraunhofer line SIF analysis: due to the atmosphere transparency in this band, the results are more

  20. The measurement of X-rays radiation temperature with a new developed filter-fluorescence spectroscopy

    Zhang Chuanfei; Lin Libin; Lou Fuhong; Peng Taiping

    2001-01-01

    The author introduces how to measure the energy spectra of X-rays by filter-fluorescence spectroscopy. The design principle and structure of new-developed double diaphragms and filter-fluorescence spectroscopy with 5 channels are depicted. The parameters of optimized spectroscopy by numerical method are given. The filter-fluorescence spectroscopy designed according as Rousseau balance principle improves signal-noises ratio

  1. 2D fluorescence spectra measurement of six kinds of bioagents simulants by short range Lidar

    Sanpedro, Man

    2018-02-01

    Pantoea agglomerans (Pan), Staphylococcus aureus (Sta), Bacillus globigii (BG) and Escherichia coli (EH), these four kinds of bioagents simulants of were cultured and then their growth curves were measured, the generation time was 0.99h, 0.835h, 1.07h and 1.909h, respectively. A small short range fluorescence lidar working at wavelengths of 266nm and 355nm was designed and used to measure the two-dimensional fluorescence spectra of bioagents simulants in the amino acid segment and NADH segment, respectively. In a controllable fluorescence measurement chamber, the two-dimensional fluorescence spectra of vegetative liquid bacterial aerosols as well as BSA and OVA, two protein toxinic simulants were measured with a resolution of 4nm. The two-dimensional fluorescence spectral shape of Pan, Sta, EH and BG, BSA and OVA were consistent with the standard fluorescent component tryptophan in the amino acid band with FWHM of 60nm, but the central wavelength of the fluorescence spectra of these simulants blue/purple shifted obviously as affected by the external biochemical environment, concentration and ratio of different bacterial internal fluorophores, so the energy level between the excited state and the ground state of the fluorescence molecule increased. Differently, weak NADH fluorescence spectra with 100nm FWHM inside the four vegetative bacteria aerosols were detected, but Rayleigh scattering, Raman scattering contribution of water, nitrogen in the fluorescence spectra could not be effectively extracted. The second - order derivative fluorescence spectra of four simulants showed that the high - order processing and recognition of the fluorescence spectra was feasible.

  2. Feasibility Demonstration of Exciplex Fluorescence Measurements in Evaporating Laminar Sprays of Diesel Fuel

    2011-05-15

    code) 1 FEASIBILITY DEMONSTRATION OF EXCIPLEX FLUORESCENCE MEASUREMENTS IN EVAPORATING LAMINAR SPRAYS OF DIESEL FUEL Final Technical Report Grant...fluorescence is found to increase with temperature up to 538 K and then declines. Fluorescence from the liquid phase, i.e. the exciplex (Naphthalene+TMPD...to have as well characterized a description of the spray environment and assess conclusively the potential of the exciplex approach for more

  3. Measurement of protein-like fluorescence in river and waste water using a handheld spectrophotometer.

    Baker, Andy; Ward, David; Lieten, Shakti H; Periera, Ryan; Simpson, Ellie C; Slater, Malcolm

    2004-07-01

    Protein-like fluorescence intensity in rivers increases with increasing anthropogenic DOM inputs from sewerage and farm wastes. Here, a portable luminescence spectrophotometer was used to investigate if this technology could be used to provide both field scientists with a rapid pollution monitoring tool and process control engineers with a portable waste water monitoring device, through the measurement of river and waste water tryptophan-like fluorescence from a range of rivers in NE England and from effluents from within two waste water treatment plants. The portable spectrophotometer determined that waste waters and sewerage effluents had the highest tryptophan-like fluorescence intensity, urban streams had an intermediate tryptophan-like fluorescence intensity, and the upstream river samples of good water quality the lowest tryptophan-like fluorescence intensity. Replicate samples demonstrated that fluorescence intensity is reproducible to +/- 20% for low fluorescence, 'clean' river water samples and +/- 5% for urban water and waste waters. Correlations between fluorescence measured by the portable spectrophotometer with a conventional bench machine were 0.91; (Spearman's rho, n = 143), demonstrating that the portable spectrophotometer does correlate with tryptophan-like fluorescence intensity measured using the bench spectrophotometer.

  4. Scattering and depolarization of polarized neutrons in ferrofluids

    Balasoiu, M.; Dokukin, E.B.; Kozhevnikov, S.V.; Nikitenko, Y.V.

    1999-01-01

    On the SPN - 1 polarized neutron spectrometer at IBR -2 high - flux pulsed rector there were carried out preliminary measurements on transmission and polarization of a neutron beam passing through a magnetic colloidal system of Fe 3 O 4 particles in transformer oil and dodecane carriers. It was found that in the ferrofluids with magnetite particles exist, dependent on the particle volume concentration and the magnitude of the external magnetic field, effects of depolarization and nuclear - magnetic small angle scattering. (author)

  5. Responses of sun-induced chlorophyll fluorescence to biological and environmental variations measured with a versatile Fluorescence Auto-Measurement Equipment (FAME)

    Gu, L.

    2017-12-01

    In this study, we examine responses of sun-induced chlorophyll fluorescence to biological and environmental variations measured with a versatile Fluorescence Auto-Measurement Equipment (FAME). FAME was developed to automatically and continuously measure chlorophyll fluorescence (F) of a leaf, plant or canopy in both laboratory and field environments, excited by either artificial light source or sunlight. FAME is controlled by a datalogger and allows simultaneous measurements of environmental variables complementary to the F signals. A built-in communication system allows FAME to be remotely monitored and data-downloaded. Radiance and irradiance calibrations can be done online. FAME has been applied in a variety of environments, allowing an investigation of biological and environmental controls on F emission.

  6. Interaction between depolarization effects, interface layer, and fatigue behavior in PZT thin film capacitors

    Böttger, U.; Waser, R.

    2017-07-01

    The existence of non-ferroelectric regions in ferroelectric thin films evokes depolarization effects leading to a tilt of the P(E) hysteresis loop. The analysis of measured hysteresis of lead zirconate titanate (PZT) thin films is used to determine a depolarization factor which contains quantitative information about interfacial layers as well as ferroelectrically passive zones in the bulk. The derived interfacial capacitance is smaller than that estimated from conventional extrapolation techniques. In addition, the concept of depolarization is used for the investigation of fatigue behavior of PZT thin films indicating that the mechanism of seed inhibition, which is responsible for the effect, occurs in the entire film.

  7. Photonic reagents for concentration measurement of flu-orescent proteins with overlapping spectra

    Goun, Alexei; Bondar, Denys I.; Er, Ali O.; Quine, Zachary; Rabitz, Herschel A.

    2016-05-01

    By exploiting photonic reagents (i.e., coherent control by shaped laser pulses), we employ Optimal Dynamic Discrimination (ODD) as a novel means for quantitatively characterizing mixtures of fluorescent proteins with a large spectral overlap. To illustrate ODD, we simultaneously measured concentrations of in vitro mixtures of Enhanced Blue Fluorescent Protein (EBFP) and Enhanced Cyan Fluorescent Protein (ECFP). Building on this foundational study, the ultimate goal is to exploit the capabilities of ODD for parallel monitoring of genetic and protein circuits by suppressing the spectral cross-talk among multiple fluorescent reporters.

  8. Light Quality Affects Chloroplast Electron Transport Rates Estimated from Chl Fluorescence Measurements.

    Evans, John R; Morgan, Patrick B; von Caemmerer, Susanne

    2017-10-01

    Chl fluorescence has been used widely to calculate photosynthetic electron transport rates. Portable photosynthesis instruments allow for combined measurements of gas exchange and Chl fluorescence. We analyzed the influence of spectral quality of actinic light on Chl fluorescence and the calculated electron transport rate, and compared this with photosynthetic rates measured by gas exchange in the absence of photorespiration. In blue actinic light, the electron transport rate calculated from Chl fluorescence overestimated the true rate by nearly a factor of two, whereas there was closer agreement under red light. This was consistent with the prediction made with a multilayer leaf model using profiles of light absorption and photosynthetic capacity. Caution is needed when interpreting combined measurements of Chl fluorescence and gas exchange, such as the calculation of CO2 partial pressure in leaf chloroplasts. © Crown copyright 2017.

  9. Measurement of fluorescence emission spectrum of few strongly driven atoms using an optical nanofiber.

    Das, Manoj; Shirasaki, A; Nayak, K P; Morinaga, M; Le Kien, Fam; Hakuta, K

    2010-08-02

    We show that the fluorescence emission spectrum of few atoms can be measured by using an optical nanofiber combined with the optical heterodyne and photon correlation spectroscopy. The observed fluorescence spectrum of the atoms near the nanofiber shows negligible effects of the atom-surface interaction and agrees well with the Mollow triplet spectrum of free-space atoms at high excitation intensity.

  10. Sulfur content measurement in coal by X-ray fluorescence method

    Cechak, T.; Thinova, L.

    2001-01-01

    X-ray fluorescence, using backscattering, was employed in the determination of sulfur content and ash content measurement in coal. The results of the methods are given to illustrate the differences between the chemical analysis and X-ray fluorescence method.

  11. Electron beam induced fluorescence measurements of the degree of hydrogen dissociation in hydrogen plasmas

    Smit, C.; Brussaard, G.J.H.; de Beer, E.C.M.; Schram, D.C.; Sanden, van de M.C.M.

    2004-01-01

    The degree of dissociation of hydrogen in a hydrogen plasma has been measured using electron beam induced fluorescence. A 20 kV, 1 mA electron beam excites both the ground state H atom and H2 molecule into atomic hydrogen in an excited state. From the resulting fluorescence the degree of

  12. First Observation of a Snake Depolarizing Resonance

    Phelps, R.; Anferov, V.; Blinov, B.; Crandell, D.; Koutin, S.; Krisch, A.; Liu, T.; Ratner, L.; Wong, V.; Chu, C.; Lee, S.; Rinckel, T.; Schwandt, P.; Sperisen, F.; Stephenson, E.; von Przewoski, B.; Sato, H.

    1997-01-01

    Using a 104MeV stored polarized proton beam and a full Siberian snake, we recently found evidence for a so-called open-quotes snakeclose quotes depolarizing resonance. A full Siberian snake forces the spin tune ν s to be a half integer. Thus, if the vertical betatron tune ν y is set near a quarter integer, then the ν s =n±2ν y second-order snake resonance can depolarize the beam. Indeed, with a full Siberian snake, we found a deep depolarization dip when ν y was equal to 4.756; moreover, when ν y was changed to 4.781, the deep dip disappeared and the polarization was preserved. copyright 1997 The American Physical Society

  13. AIRFLY: Measurement of the fluorescence yield in atmospheric gases

    Arciprete, F.; Boháčová, Martina; Buonomo, B.; Caruso, R.; Di Carlo, P.; Doubrava, M.; Esposito, A.; Facal, P.; Fauth, A.C.; Goletti, C.; Hrabovský, Miroslav; Iarlori, M.; Keilhauer, B.; Kemp, E.; Klages, H.O.; Kleifges, M.; Klepser, S.; Mazzitelli, G.; Morozov, L.; Nožka, Libor; Palatka, Miroslav; Petrera, S.; Privitera, P.; Řídký, Jan; Schovánek, Petr; Vacek, V.; Waldenmaier, T.

    2006-01-01

    Roč. 56, Suppl. A (2006), A361-A367 ISSN 0011-4626. [From Colliders to Cosmic Rays. Prague, 07.09.2005-13.09.2005] R&D Projects: GA MŠk(CZ) LA 134; GA ČR(CZ) GA202/05/2470 Institutional research plan: CEZ:AV0Z10100502 Keywords : cosmic rays * air fluorescence * linear accelerators Subject RIV: BF - Elementary Particles and High Energy Physics Impact factor: 0.568, year: 2006

  14. Fluorescence Endoscopy in vivo based on Fiber-bundle Measurements

    Zufiria, B.; Gomez-Garcia, P.; Stamatakis, K.; Vaquero, J.J.; Fresno, M.; Desco, M.; Ripoll, J.; Arranz, A.

    2016-07-01

    High-resolution imaging techniques have become important for the determination of the cellular organization that is coupled to organ function. In many cases the organ can be viewed without the need of ionizing radiation techniques in an easier way. This is the case of the gastrointestinal tract, an organ that can be directly accessed with endoscopy avoiding any invasive procedure. Here we describe the design, assembly and testing of a fluorescence high-resolution endoscope intended for the study of the cellular organization of the colon in an experimental mouse model of colon carcinoma. Access to the colon of the mouse took place using a fiber-optic bundle that redirects the light coming from a LED to produce fluorescence and detect it back through the fiber bundle. Results from in vivo and ex-vivo test using our fluorescence fiber bundle endoscope show altered tissue structure and destruction of the intestinal crypts in tumor-bearing areas compared with healthy tissue. (Author)

  15. Measurements of the Ultraviolet Fluorescence Cross Sections and Spectra of Bacillus Anthracis Simulants

    Stephens, J.R.

    1998-09-01

    Measurements of the ultraviolet autofluorescence spectra and absolute cross sections of the Bacillus anthracis (Ba) simulants Bacillus globigii (Bg), Bacillus megaterium (Bm), Bacillus subtilis (Bs), and Bacillus cereus (Bc) were measured. Fluorescence spectra and cross sections of pine pollen (Pina echinata) were measured for comparison. Both dried vegetative cells and spores separated from the sporulated vegetative material were studied. The spectra were obtained by suspending a small number (<10) of particles in air in our Single Particle Spectroscopy Apparatus (SPSA), illuminating the particles with light from a spectrally filtered arc lamp, and measuring the fluorescence spectra of the particles. The illumination was 280 nm (20 nm FWHM) and the fluorescence spectra was measured between 300 and 450 nm. The fluorescence cross section of vegetative Bg peaks at 320 nm with a maximum cross section of 5 X 10{sup -14} cm{sup 2}/sr-nm-particle while the Bg spore fluorescence peaks at 310 nm with peak fluorescence of 8 X 10{sup -15} cm{sup 2}/sr-nm-particle. Pine pollen particles showed a higher fluorescence peaking at 355 nm with a cross section of 1.7 X 10{sup -13} cm{sup 2}/sr-nm-particle. Integrated cross sections ranged from 3.0 X 10{sup -13} for the Bg spores through 2.25 X 10{sup -12} (cm{sup 2}/sr-particle) for the vegetative cells.

  16. Atrioventricular depolarization differences identify coronary artery anomalies in Kawasaki disease.

    Cortez, Daniel; Sharma, Nandita; Jone, Pei-Ni

    2017-03-01

    Kawasaki disease (KD) is the leading cause of acquired heart disease in children. Signal average electrocardiogram changes in patients during the acute phase of KD with coronary artery anomalies (CAA) include depolarization changes. We set out to determine if 12-lead-derived atrioventricular depolarization differences can identify CAA in patients with KD. A blinded, retrospective case-control study of patients with KD was performed. Deep Q waves, corrected QT-intervals (QTc), spatial QRS-T angles, T-wave vector magnitudes (RMS-T), and a novel parameter for assessment of atrioventricular depolarization difference (the spatial PR angle) and a two dimensional PR angle were assessed. Comparisons between groups were performed to test for significant differences. One hundred one patients with KD were evaluated, with 68 having CAA (67.3%, mean age 3.6 ± 3.0 years, 82.6% male), and 32 without CAA (31.7%, mean age 2.7 ± 3.2 years, 70.4% male). The spatial PR angle significantly discriminated KD patients with CAA from those without, 59.7° ± 31.1° versus 41.6° ± 11.5° (p differences, measured by the spatial or two dimensional PR angle differentiate KD patients with CAA versus those without. © 2016 Wiley Periodicals, Inc.

  17. Platinum plasmonic nanostructure arrays for massively parallel single-molecule detection based on enhanced fluorescence measurements

    Saito, Toshiro; Takahashi, Satoshi; Obara, Takayuki; Itabashi, Naoshi; Imai, Kazumichi

    2011-01-01

    We fabricated platinum bowtie nanostructure arrays producing fluorescence enhancement and evaluated their performance using two-photon photoluminescence and single-molecule fluorescence measurements. A comprehensive selection of suitable materials was explored by electromagnetic simulation and Pt was chosen as the plasmonic material for visible light excitation near 500 nm, which is preferable for multicolor dye-labeling applications like DNA sequencing. The observation of bright photoluminescence (λ = 500-600 nm) from each Pt nanostructure, induced by irradiation at 800 nm with a femtosecond laser pulse, clearly indicates that a highly enhanced local field is created near the Pt nanostructure. The attachment of a single dye molecule was attempted between the Pt triangles of each nanostructure by using selective immobilization chemistry. The fluorescence intensities of the single dye molecule localized on the nanostructures were measured. A highly enhanced fluorescence, which was increased by a factor of 30, was observed. The two-photon photoluminescence intensity and fluorescence intensity showed qualitatively consistent gap size dependence. However, the average fluorescence enhancement factor was rather repressed even in the nanostructure with the smallest gap size compared to the large growth of photoluminescence. The variation of the position of the dye molecule attached to the nanostructure may influence the wide distribution of the fluorescence enhancement factor and cause the rather small average value of the fluorescence enhancement factor.

  18. Determination of absolute Ba densities during dimming operation of fluorescent lamps by laser-induced fluorescence measurements

    Hadrath, S; Beck, M; Garner, R C; Lieder, G; Ehlbeck, J

    2007-01-01

    Investigations of fluorescent lamps (FL) are often focused on the electrodes, since the lifetime of the lamps is typically limited by the electrode lifetime and durability. During steady state operation, the work function lowering emitter material, in particular, barium, is lost. Greater barium losses occur under dimming conditions, in which reduced discharge currents lead to increased cathode falls, the result of the otherwise diminished heating of the electrode by the bombarding plasma ions. In this work the barium density near the electrodes of (FL), operating in high frequency dimming mode is investigated using the high-sensitivity method of laser-induced fluorescence. From these measurements we infer barium loss for a range of discharge currents and auxiliary coil heating currents. We show that the Ba loss can very easily be reduced by moderate auxiliary coil heating

  19. Measuring reactive oxygen and nitrogen species with fluorescent probes: challenges and limitations

    Kalyanaraman, Balaraman; Darley-Usmar, Victor; Davies, Kelvin J.A.; Dennery, Phyllis A.; Forman, Henry Jay; Grisham, Matthew B.; Mann, Giovanni E.; Moore, Kevin; Roberts, L. Jackson; Ischiropoulos, Harry

    2013-01-01

    The purpose of this position paper is to present a critical analysis of the challenges and limitations of the most widely used fluorescent probes for detecting and measuring reactive oxygen and nitrogen species. Where feasible, we have made recommendations for the use of alternate probes and appropriate analytical techniques that measure the specific products formed from the reactions between fluorescent probes and reactive oxygen and nitrogen species. We have proposed guidelines that will help present and future researchers with regard to the optimal use of selected fluorescent probes and interpretation of results. PMID:22027063

  20. Depolarization of diffusing spins by paramagnetic impurities

    Schillaci, M.E.; Hutson, R.L.; Heffner, R.H.; Leon, M.; Dodds, S.A.; Estle, T.L.

    1981-01-01

    We study the depolarization of diffusing spins (muons) interacting with dilute paramagnetic impurities in a solid using a simple computational model which properly treats the muon motion and preserves correct muon-impurity distances. Long-range (dipolar) and nearest-neighbor (contact) interactions are treated together. Diffusion parameters are deduced and model comparisons made for AuGd (300 ppm). (orig.)

  1. Neutron Depolarization in Submicron Ferromagnetic Materials

    Rekveldt, M.Th.

    1989-01-01

    The neutron depolarization technique is based on the loss of polarization of a polarized neutron beam after transmission through ferromagnetic substances. This loss, caused by Larmor precession in individual domains, determines the mean domain size, the mean square direction cosines of the domains

  2. Recording, analysis, and interpretation of spreading depolarizations in neurointensive care

    Dreier, Jens P; Fabricius, Martin; Ayata, Cenk

    2017-01-01

    Spreading depolarizations (SD) are waves of abrupt, near-complete breakdown of neuronal transmembrane ion gradients, are the largest possible pathophysiologic disruption of viable cerebral gray matter, and are a crucial mechanism of lesion development. Spreading depolarizations are increasingly r...

  3. Standard reference for instrument response function in fluorescence lifetime measurements in visible and near infrared

    Chib, Rahul; Shah, Sunil; Gryczynski, Zygmunt; Fudala, Rafal; Borejdo, Julian; Gryczynski, Ignacy; Zelent, Bogumil; Corradini, Maria G; Ludescher, Richard D

    2016-01-01

    Allura red (AR) fluorophore, a common dye in the food industry, displays a broad emission spectrum in water (visible-to-near infrared region of the electromagnetic spectrum) and has a remarkably short fluorescence lifetime of about 10 ps. This short lifetime does not depend on the emission (observation) wavelength. We examined time responses of AR fluorescence across emission wavelengths from 550 nm to 750 nm and found that it is an ideal candidate for impulse response functions in fluorescence lifetime measurements. (technical note)

  4. Storage ring lattice calibration using resonant spin depolarization

    K. P. Wootton

    2013-07-01

    Full Text Available This paper presents measurements of the GeV-scale electron beam energy for the storage rings at the synchrotron light source facilities Australian Synchrotron (AS and SPEAR3 at SLAC. Resonant spin depolarization was employed in the beam energy measurement, since it is presently the highest precision technique and an uncertainty of order 10^{-6} was achieved at SPEAR3 and AS. Using the resonant depolarization technique, the beam energy was measured at various rf frequencies to measure the linear momentum compaction factor. This measured linear momentum compaction factor was used to evaluate models of the beam trajectory through combined-function bending magnets. The main bending magnets of both lattices are rectangular, horizontally defocusing gradient bending magnets. Four modeling approaches are compared for the beam trajectory through the bending magnet: a circular trajectory, linear and nonlinear hyperbolic cosine trajectories, and numerical evaluation of the trajectory through the measured magnetic field map. Within the uncertainty of the measurement the momentum compaction factor is shown to agree with the numerical model of the trajectory within the bending magnet, and disagree with the hyperbolic cosine approximation.

  5. Disparity in formulations used for fluorescent X-ray intensity measurements

    Mittal, Raj; Gupta, Sheenu

    2011-01-01

    The paper presents a problem in computations of X-ray fluorescence cross-sections, shell/sub-shell fluorescence yields, Coster-Kronig yields, vacancy alignment, etc. from X-ray fluorescence (XRF) studies. While using barn/atom as a unit for cross-sections if the atomic masses are not considered it causes a discrepancy in the measured cross-section, yield and alignment values. Most of the earlier publications are being quoted where such an oversight has occurred and discrepancy is evident. - Highlights: → Manuscript gives basic formulation for measurements of fluorescent X-ray intensities. → Most publications ignored the fact that use of barn/atom units for cross-sections requires atomic masses. → Published experimental results higher by a factor ≥2 or less by factor 1/M K . → Inspection of published data on XRF parameters needed.

  6. Resonant depolarization in electron storage rings equipped with ''siberia snakes''

    Buon, J.

    1984-11-01

    Resonant depolarization induced by field errors and quantum emissions in an electron ring equipped with two ''siberian snakes'' is investigated with a first order perturbation calculation. It is shown that this depolarization is not reduced by the snakes when the operating energy is set out of the depolarization resonances [fr

  7. Renal function measured by X-ray fluorescence analysis

    Boijsen, M.; Jacobsson, L.; Tylen, U.; Sahlgrenska Sjukhuset, Goeteborg

    1987-01-01

    In twenty-six patients injected with metrizoate during urography, plasma was analyzed for iodine concentration using X-ray fluorescence analysis, and total plasma clearance of contrast medium was calculated. Total plasma clearance of 51 Cr-EDTA was also determined, but not simultaneously, in order to find out if the urographic procedure would influence the kidneys to such an extent that the contrast medium clearance value would differ much from the 51 Cr-EDTA clearance value. The errors in the method were assessed and the total error of the contrast medium clearance determination was calculated. When comparing 51 Cr-EDTA and metrizoate clearance a correlation of 0.94 and a mean ratio of 1.046 (SD 0.138) was found. The assessable errors cannot fully explain the standard deviation, which might indicate a transient change in kidney function related to elements of the urographic procedure such as laxation with possible dehydration and/or the contrast medium dose. (orig.)

  8. Measurement of uranium in soil environment optimization of liquid fluorescent method improvement

    Qin Guangcheng; Li Yan

    2013-01-01

    Measurement of uranium in soil environment were introduced in this paper optimization improvement fluid fluorescence analysis method. Use 'on the determination of uranium in soil, rocks, etc. Samples of liquid fluorescent method' when measuring low environment soil samples can not meet the required precision of 8% or less in gansu province and method detection limit of 0.3 mg/kg or less. In affecting the method detection limit, recovery rate and precision of the soil sample decomposition temperature, measuring the temperature of the sample, sample pH value measurement, the background fluorescence measurement condition optimization of analysis is determined, the method detection limit of 0.133 mg/kg, the average recovery rate was 96.6%, the precision is 3.80%. The experimental results show that the method can meet the requirements for determination of trace uranium m environment soil samples. (authors)

  9. DEVELOPMENT OF EVALUATION OF A QUANTITATIVE VIDEO-FLUORESCENCE IMAGING SYSTEM AND FLUORESCENT TRACER FOR MEASURING TRANSFER OF PESTICIDE RESIDUES FROM SURFACES TO HANDS WITH REPEATED CONTACTS

    A video imaging system and the associated quantification methods have been developed for measurement of the transfers of a fluorescent tracer from surfaces to hands. The highly fluorescent compound riboflavin (Vitamin B2), which is also water soluble and non-toxic, was chosen as...

  10. Herbicide impact on Hormosira banksii gametes measured by fluorescence and germination bioassays

    Seery, Cliff R. [Institute for Water and Environmental Resource Management, Department of Environmental Sciences, University of Technology, Sydney, Westbourne Street, Gore Hill, 2065 NSW (Australia); Gunthorpe, Leanne [Primary Industries Research Victoria (PIRVic), VIC (Australia); Ralph, Peter J. [Institute for Water and Environmental Resource Management, Department of Environmental Sciences, University of Technology, Sydney, Westbourne Street, Gore Hill, 2065 NSW (Australia)]. E-mail: peter.ralph@uts.edu.au

    2006-03-15

    The innovative bioassay described here involves chlorophyll a fluorescence measurements of gametes from the macroalgae, Hormosira banksii, where gametes (eggs) were exposed to Diuron, Irgarol and Bromacil. Response was assessed as percent inhibition from control of effective quantum yield ({delta}F/Fm') of photosystem II, herein referred to as % PSII Inhibition. This was measured with the dual-channelled pulse amplitude modulated (PAM) fluorometer, ToxY-PAM. The fluorescence bioassay was run simultaneously with an established H. banksii germination bioassay to compare sensitivity, precision, and time-to-result. The fluorescence bioassay gave highly sensitive results evidenced by EC{sub 5}s (% PSII Inhibition) for Diuron, Irgarol and Bromacil being three, four and three orders of magnitude (respectively) lower than EC{sub 5}s generated from the germination bioassays. Precision of the fluorescence bioassay was demonstrated with low coefficient of variations (<30%) for all three toxicants. With regard to time, the fluorescence bioassay gave results within 6 h, as opposed to more than 50 h for the germination bioassay. - Chlorophyll a fluorescence measurements form the basis of a macroalgal bioassay with many advantages over germination-based methods.

  11. Herbicide impact on Hormosira banksii gametes measured by fluorescence and germination bioassays

    Seery, Cliff R.; Gunthorpe, Leanne; Ralph, Peter J.

    2006-01-01

    The innovative bioassay described here involves chlorophyll a fluorescence measurements of gametes from the macroalgae, Hormosira banksii, where gametes (eggs) were exposed to Diuron, Irgarol and Bromacil. Response was assessed as percent inhibition from control of effective quantum yield (ΔF/Fm') of photosystem II, herein referred to as % PSII Inhibition. This was measured with the dual-channelled pulse amplitude modulated (PAM) fluorometer, ToxY-PAM. The fluorescence bioassay was run simultaneously with an established H. banksii germination bioassay to compare sensitivity, precision, and time-to-result. The fluorescence bioassay gave highly sensitive results evidenced by EC 5 s (% PSII Inhibition) for Diuron, Irgarol and Bromacil being three, four and three orders of magnitude (respectively) lower than EC 5 s generated from the germination bioassays. Precision of the fluorescence bioassay was demonstrated with low coefficient of variations (<30%) for all three toxicants. With regard to time, the fluorescence bioassay gave results within 6 h, as opposed to more than 50 h for the germination bioassay. - Chlorophyll a fluorescence measurements form the basis of a macroalgal bioassay with many advantages over germination-based methods

  12. A scattering model for rain depolarization

    Wiley, P. H.; Stutzman, W. L.; Bostian, C. W.

    1973-01-01

    A method is presented for calculating the amount of depolarization caused by precipitation for a propagation path. In the model the effects of each scatterer and their interactions are accounted for by using a series of simplifying steps. It is necessary only to know the forward scattering properties of a single scatterer. For the case of rain the results of this model for attenuation, differential phase shift, and cross polarization agree very well with the results of the only other model available, that of differential attenuation and differential phase shift. Calculations presented here show that horizontal polarization is more sensitive to depolarization than is vertical polarization for small rain drop canting angle changes. This effect increases with increasing path length.

  13. Entanglement degradation in depolarizing light scattering

    Aiello, A.; Woerdman, J.P.

    2005-01-01

    Full text: In the classical regime, when a beam of light is scattered by a medium, it may emerge partially or completely depolarized depending on the optical properties of the medium. Correspondingly, in the quantum regime, when an entangled two-photon pair is scattered, the classical depolarization may result in an entanglement degradation. Here, relations between photon scattering, entanglement and multi-mode detection are investigated. We establish a general framework in which one- and two-photon elastic scattering processes can be discussed, and we focus on the study of the intrinsic entanglement degradation caused by a multi-mode detection. We show that any multi-mode scattered state cannot maximally violate the Bell-CHSH inequality because of the momentum spread. The results presented here have general validity and can be applied to both deterministic and random scattering processes. (author)

  14. Electron beam depolarization in a damping ring

    Minty, M.

    1993-04-01

    Depolarization of a polarized electron beam injected into a damping ring is analyzed by extending calculations conventionally applied to proton synchrotrons. Synchrotron radiation in an electron ring gives rise to both polarizing and depolarizing effects. In a damping ring, the beam is stored for a time much less than the time for self polarization. Spin flip radiation may therefore be neglected. Synchrotron radiation without spin flips, however, must be considered as the resonance strength depends on the vertical betatron oscillation amplitude which changes as the electron beam is radiation damped. An expression for the beam polarization at extraction is derived which takes into account radiation damping. The results are applied to the electron ring at the Stanford Linear Collider and are compared with numerical matrix formalisms

  15. Concentration depolarization of luminescence of Eu3+-doped glasses

    Bodunov, E.N.; Lebedev, V.P.; Malyshev, V.A.; Przheuskij, A.K.

    1989-01-01

    Experimental study of concentrational depolarization luminescence (CDL) of phosphate and germanate glasses, containing Eu 3+ ions, has been carried out. On the basis of three-body self-consistent approximation the theory of CDL is conceived, which takes into account Eu-Eu interaction of higher multipolarities. By comparing the theory with the experiment energy transfer radii for Eu-Eu dipole-dipole, dipole-quadrupole and quadrupole-quadrupole interactions are determined. The attempt to discriminate Eu-Eu interaction types in the studied range of Eu 3+ ion concentration change has failed owing to law accuracy of luminescence emittance anisotropy measurement

  16. Discriminative detection of bivalent Cu by dual-emission ZnSe quantum dot fluorescence sensing via ratiometric fluorescence measurements

    Wang, Chunlei; Zhou, Shujie; Xu, Shuhong; Wang, Zhuyuan; Cui, Yiping

    2014-01-01

    In this work, we showed that 1-thioglycerol (TG)-capped ZnSe quantum dots (QDs) with dual-emission could perform ideal QD fluorescence sensing for ratiometric fluorescence measurements. By comparing the fluorescence ratios at two emission peaks before and after the addition of cations, the discriminative detection of Cu(II) was realized, even in the case of co-existing with large amounts of other sensitive cations, such as Ag(I). The discriminative detection of Cu(II) is accurate with co-existing Ag(I) below 10 μmol L −1 . By a joint investigation of the ionic diffuse dynamics and carrier recombination dynamics, we found that the adsorbed layer of QDs plays a key role in the discriminative detection of Cu(II) from Ag(I) or other sensitive cations. The moderate adsorption capacity with a QD adsorbed layer makes Cu(II) capable of travelling across the QD double-layer structure, following a surface doping process via chemical reactions between Cu(II) and the QD surface atoms. As a result of Cu(II) doping, there were three major carrier recombination channels: the non-radiation recombination between the QD conduction band to the Cu(II) energy level, together with the non-radiation recombination and radiation recombination between the trap state energy levels and the Cu(II) energy level. As for Ag(I) and other sensitive cations, they have a strong adsorption capacity with the QD adsorbed layer, making them mainly present on the adsorbed layer. Due to the blocking of the ligand layer, we only observed weak coupling of the ZnSe conduction band with the Ag(I) energy level via a non-radiation recombination channel. (paper)

  17. Precision analysis for standard deviation measurements of immobile single fluorescent molecule images.

    DeSantis, Michael C; DeCenzo, Shawn H; Li, Je-Luen; Wang, Y M

    2010-03-29

    Standard deviation measurements of intensity profiles of stationary single fluorescent molecules are useful for studying axial localization, molecular orientation, and a fluorescence imaging system's spatial resolution. Here we report on the analysis of the precision of standard deviation measurements of intensity profiles of single fluorescent molecules imaged using an EMCCD camera.We have developed an analytical expression for the standard deviation measurement error of a single image which is a function of the total number of detected photons, the background photon noise, and the camera pixel size. The theoretical results agree well with the experimental, simulation, and numerical integration results. Using this expression, we show that single-molecule standard deviation measurements offer nanometer precision for a large range of experimental parameters.

  18. Quantitative liquid and vapor distribution measurements in evaporating fuel sprays using laser-induced exciplex fluorescence

    Fansler, Todd D; Drake, Michael C; Gajdeczko, Boguslaw; Düwel, Isabell; Koban, Wieland; Zimmermann, Frank P; Schulz, Christof

    2009-01-01

    Fully quantitative two-dimensional measurements of liquid- and vapor-phase fuel distributions (mass per unit volume) from high-pressure direct-injection gasoline injectors are reported for conditions of both slow and rapid vaporization in a heated, high-pressure spray chamber. The measurements employ the coevaporative gasoline-like fluorobenzene (FB)/diethylmethylamine (DEMA)/hexane exciplex tracer/fuel system. In contrast to most previous laser-induced exciplex-fluorescence (LIEF) experiments, the quantitative results here include regions in which liquid and vapor fuel coexist (e.g. near the injector exit). A unique aspect is evaluation of both vapor- and liquid-phase distributions at varying temperature and pressure using only in situ vapor-phase fluorescence calibration measurements at room temperature and atmospheric pressure. This approach draws on recent extensive measurements of the temperature-dependent spectroscopic properties of the FB–DEMA exciplex system, in particular on knowledge of the quantum efficiencies of the vapor-phase and liquid-phase (exciplex) fluorescence. In addition to procedures necessary for quantitative measurements, we discuss corrections for liquid–vapor crosstalk (liquid fluorescence that overlaps the vapor-fluorescence bandpass), the unknown local temperature due to vaporization-induced cooling, and laser-sheet attenuation by scattering and absorption

  19. Fluorescence Spectrum and Decay Measurement for Hsil VS Normal Cytology Differentiation in Liquid Pap Smear Supernatant

    Vaitkuviene, A.; Gegzna, V.; Juodkazis, S.; Jursenas, S.; Miasojedovas, S.; Kurtinaitiene, R.; Rimiene, J.; Vaitkus, J.

    2009-06-01

    Cervical smear material contains endo and exocervical cells, mucus and inflammative, immune cells in cases of pathology. Just not destroyed keratinocytes lay on the glass for microscopy. Liquid cytology supernatant apart other diagnostics could be used for photodiagnostic. The spectroscopic parameters suitable for Normal and HSIL cytology groups supernatant differentiation are demonstrated. The dried liquid PAP supernatant fractions—sediment and liquid were investigated. Excitation and emission matrices (EEM), supernatant fluorescence decay measured under 280 nm diode short pulse excitation and fluorescence spectroscopy by excitation with 355 nm laser light were analyzed. The differences between Normal and HSIL groups were statistically proven in the certain spectral regions. Fluorescence decay peculiarities show spectral regions consisting of few fluorophores. Obtained results on fluorescence differences in Normal and HSIL groups' supernatant shows the potency of photodiagnosis application in cervical screening.

  20. Improvement of graphite crystal analyzer for light elements on X-ray fluorescence holography measurement

    Happo, Naohisa; Hada, Takuma; Kubota, Atsushi; Ebisu, Yoshihiro; Hosokawa, Shinya; Kimura, Koji; Tajiri, Hiroo; Matsushita, Tomohiro; Hayashi, Kouichi

    2018-05-01

    Using a graphite crystal analyzer, focused monochromatic fluorescent X-rays can be obtained on an X-ray fluorescence holography (XFH) measurement. To measure the holograms of elements lighter than Ti, we improved a cylindrical-type crystal analyzer and constructed a small C-shaped analyzer. Using the constructed C-shaped analyzer, a Ca Kα hologram of a fluorite single crystal was obtained, from which we reconstructed a clear atomic image. The XFH measurements for the K, Ca, and Sc elements become possible using the presently constructed analyzer.

  1. Time-Resolved Fluorescence Anisotropy of Bicyclo[1.1.1]pentane/Tolane-Based Molecular Rods Included in Tris(o-phenylenedioxy)cyclotriphosphazene (TPP).

    Cipolloni, Marco; Kaleta, Jiří; Mašát, Milan; Dron, Paul I; Shen, Yongqiang; Zhao, Ke; Rogers, Charles T; Shoemaker, Richard K; Michl, Josef

    2015-04-23

    We examine the fluorescence anisotropy of rod-shaped guests held inside the channels of tris( o -phenylenedioxy)cyclotriphosphazene (TPP) host nanocrystals, characterized by powder X-ray diffraction and solid state NMR spectroscopy. We address two issues: (i) are light polarization measurements on an aqueous colloidal solution of TPP nanocrystals meaningful, or is depolarization by scattering excessive? (ii) Can measurements of the rotational mobility of the included guests be performed at low enough loading levels to suppress depolarization by intercrystallite energy transfer? We find that meaningful measurements are possible and demonstrate that the long axis of molecular rods included in TPP channels performs negligible vibrational motion.

  2. In vivo measurements of the seasonal photosynthetic fluorescence of the Mediterranean coral Cladocora caespitosa (L.

    Andrea Peirano

    2007-12-01

    Full Text Available In situ photosynthetic fluorescence of the zooxanthellate Mediterranean coral Cladocora caespitosa (L. was measured seasonally on colonies from 5 to 27 m depth using an INF-300 Integrating Natural Fluorometer (Biospherical Instrument Inc.. This oceanographic instrument, used to measure the in vivo phytoplankton chlorophyll a (Chl a fluorescence, was adapted to record the natural fluorescence of C. caespitosa by SCUBA divers. The resulting curves of natural fluorescence of Chl a vs photosynthetically active radiation (PAR 400-700 nm showed that: (1 natural fluorescence was limited by light availability in both deep and shallow colonies in all seasons; (2 photosynthesis occurred in C. caespitosa also in winter, when temperature is low and seawater turbidity contributes significantly to PAR attenuation; and (3 the efficiency of the Chl a fluorescence increased from summer to winter. This last finding outlines the winter coupling between zooxanthellae activity and calcification processes and is consistent with the formation of the high density band in the coral skeleton.

  3. Fluorescence Quantum Yield Measurements of Fluorescent Proteins: A Laboratory Experiment for a Biochemistry or Molecular Biophysics Laboratory Course

    Wall, Kathryn P.; Dillon, Rebecca; Knowles, Michelle K.

    2015-01-01

    Fluorescent proteins are commonly used in cell biology to assess where proteins are within a cell as a function of time and provide insight into intracellular protein function. However, the usefulness of a fluorescent protein depends directly on the quantum yield. The quantum yield relates the efficiency at which a fluorescent molecule converts…

  4. Neutron depolarization effects in a high-Tc superconductor (abstract)

    Nunes, A. C.; Pickart, S. J.; Crow, L.; Goyette, R.; McGuire, T. R.; Shinde, S.; Shaw, T. M.

    1988-11-01

    Using the polarized beam small-angle neutron scattering spectrometer at the Rhode Island Nuclear Science Center Reactor, we have observed significant depolarization of a neutron beam by passage through polycrystalline high-Tc superconductors, specifically 123 Y-Ba-Cu-O prepared and characterized at the IBM Watson Research Center. We believe that this technique will prove useful in studying aspects of these materials, such as the penetration depth of shielding currents, the presence and structure of trapped flux vortices, and grain size effects on the supercurrent distribution in polycrystalline samples. The two samples showed sharp transitions at 87 and 89 K, and have been studied at temperatures of 77 K; the second sample has also been studied at 4 K. The transition to the superconducting state was monitored by the shift in resonant frequency of a coil surrounding the sample. No measurable depolarization was observed in either sample at 77 K in both the field-cooled and zero-field-cooled states, using applied fields of 0 (nominal), 54, and 1400 Oe. This negative result may be connected with the fact that the material is still in the reversible region as indicated by susceptibility measurements, but it allows an estimate of the upper bound of possible inhomogeneous internal fields, assuming a distance scale for the superconducting regions. For the 10-μm grain size suggested by photomicrographs, this upper bound for the field turns out to be 1.2 kOe, which seems reasonable. At 4 K a significant depolarization was observed when the sample was cooled in low fields and a field of 1400 Oe was subsequently applied. This result suggests that flux lines are penetrating the sample. Further investigations are being carried out to determine the field and temperature dependence of the depolarization, and attempts will be made to model it quantitatively in terms of possible internal field distributions. We are also searching for possible diffraction effects from ordered vortex

  5. Plant Chlorophyll fluorescence: active and passive measurements at canopy and leaf scales with different nitrogen treatments

    Most studies assessing chlorophyll fluorescence (ChlF) have examined leaf responses to environmental stress conditions using active techniques. Alternatively, passive techniques are able to measure ChlF at both leaf and canopy scales. However, although the measurement principles of both techniques a...

  6. Toward autonomous measurements of photosynthetic electron transport rates: An evaluation of active fluorescence-based measurements of photochemistry

    Silsbe, G.M.; Oxborough, K.; Suggett, D.J.; Forster, R.M.; Ihnken, S.; Komárek, O.; Lawrenz, E.; Prášil, O.; Röttgers, R.; Šicner, M.; Simis, S.G.H.; Van Dijk, M.A.; Kromkamp, J.C.

    2015-01-01

    This study presents a methods evaluation and intercalibration of active fluorescence-based measurements of the quantum yield ( inline image) and absorption coefficient ( inline image) of photosystem II (PSII) photochemistry. Measurements of inline image, inline image, and irradiance (E) can be

  7. On the performance of bioanalytical fluorescence correlation spectroscopy measurements in a multiparameter photon-counting microscope

    Mazouchi, Amir; Liu Baoxu; Bahram, Abdullah [Department of Physics, Institute for Optical Sciences, University of Toronto, Toronto (Canada); Department of Chemical and Physical Sciences, University of Toronto Mississauga, 3359 Mississauga Rd. N., Mississauga, ON, L5L 1C6 (Canada); Gradinaru, Claudiu C., E-mail: claudiu.gradinaru@utoronto.ca [Department of Physics, Institute for Optical Sciences, University of Toronto, Toronto (Canada); Department of Chemical and Physical Sciences, University of Toronto Mississauga, 3359 Mississauga Rd. N., Mississauga, ON, L5L 1C6 (Canada)

    2011-02-28

    Fluorescence correlation spectroscopy (FCS) data acquisition and analysis routines were developed and implemented in a home-built, multiparameter photon-counting microscope. Laser excitation conditions were investigated for two representative fluorescent probes, Rhodamine110 and enhanced green fluorescent protein (EGFP). Reliable local concentrations and diffusion constants were obtained by fitting measured FCS curves, provided that the excitation intensity did not exceed 20% of the saturation level for each fluorophore. Accurate results were obtained from FCS measurements for sample concentrations varying from pM to {mu}M range, as well as for conditions of high background signals. These experimental constraints were found to be determined by characteristics of the detection system and by the saturation behavior of the fluorescent probes. These factors actually limit the average number of photons that can be collected from a single fluorophore passing through the detection volume. The versatility of our setup and the data analysis capabilities were tested by measuring the mobility of EGFP in the nucleus of Drosophila cells under conditions of high concentration and molecular crowding. As a bioanalytical application, we studied by FCS the binding affinity of a novel peptide-based drug to the cancer-regulating STAT3 protein and corroborated the results with fluorescence polarization analysis derived from the same photon data.

  8. LCLS in—photon out: fluorescence measurement of neon using soft x-rays

    Obaid, Razib; Buth, Christian; Dakovski, Georgi L.; Beerwerth, Randolf; Holmes, Michael; Aldrich, Jeff; Lin, Ming-Fu; Minitti, Michael; Osipov, Timur; Schlotter, William; Cederbaum, Lorenz S.; Fritzsche, Stephan; Berrah, Nora

    2018-02-01

    We measured the fluorescence photon yield of neon upon soft x-ray ionization (∼1200 eV) from the x-ray free-electron laser at Linac Coherent Light Source, and demonstrated the usage of a grazing incidence spectrometer with a variable line spacing grating to perform x-ray fluorescence spectroscopy on a gas phase system. Our measurements also allowed us to estimate the focal size of the beam from the theoretical description developed, in terms of the rate equation approximation accounting for photoionization shake off of neutral neon and double auger decay of single core holes.

  9. Direct spectrometry: a new alternative for measuring the fluorescence of composite resins and dental tissues.

    da Silva, Tm; de Oliveira, Hpm; Severino, D; Balducci, I; Huhtala, Mfrl; Gonçalves, Sep

    2014-01-01

    The aim of this study was to evaluate the fluorescence intensity of different composite resins and compare those values with the fluorescence intensity of dental tissues. Different composite resins were used to make 10 discs (2 mm in depth and 4 mm in diameter) of each brand, divided into groups: 1) Z (Filtek Z350, 3M ESPE), 2) ES (Esthet-X, Dentsply), 3) A (Amelogen Plus, Ultradent), 4) DVS (Durafill-VS, Heraeus Kulzer) with 2 mm composite resin for enamel (A2), 5) OES ([Esthet-X] opaque-OA [1 mm] + enamel-A2 [1 mm]); 6) ODVSI ([Charisma-Opal/Durafill-VSI], opaque-OM (1 mm) + translucent [1mm]), and 7) DVSI ([Durafill- VSI] translucent [2 mm]). Dental tissue specimens were obtained from human anterior teeth cut in a mesiodistal direction to obtain enamel, dentin, and enamel/dentin samples (2 mm). The fluorescence intensity of specimens was directly measured using an optic fiber associated with a spectrometer (Ocean Optics USB 4000) and recorded in graphic form (Origin 8.0 program). Data were submitted to statistical analysis using Dunnet, Tukey, and Kruskall-Wallis tests. Light absorption of the composite resins was obtained in a spectral range from 250 to 450 nm, and that of dental tissues was between 250 and 300 nm. All composite resins were excited at 398 nm and exhibited maximum emissions of around 485 nm. Fluorescence intensity values for all of the resins showed statistically significant differences (measured in arbitrary units [AUs]), with the exception of groups Z and DVS. Group DVSI had the highest fluorescence intensity values (13539 AU), followed by ODVS (10440 AU), DVS (10146 AU), ES (3946 AU), OES (3841 AU), A (3540 AU), and Z (1146 AU). The fluorescence intensity values for the composite resins differed statistically from those of dental tissues (E=1380 AU; D=6262 AU; E/D=3251 AU). The opacity interfered with fluorescence intensity, and group Z demonstrated fluorescence intensity values closest to that of tooth enamel. It is concluded that the

  10. Time-resolved UV-excited microarray reader for fluorescence energy transfer (FRET) measurements

    Orellana, Adelina; Hokkanen, Ari P.; Pastinen, Tomi; Takkinen, Kristina; Soderlund, Hans

    2001-05-01

    Analytical systems based on immunochemistry are largely used in medical diagnostics and in biotechnology. There is a significant pressure to develop the present assay formats to become easier to use, faster, and less reagent consuming. Further developments towards high density array--like multianalyte measurement systems would be valuable. To this aim we have studied the applicability of fluorescence resonance energy transfer and time-resolved fluorescence resonance energy transfer in immunoassays on microspots and in microwells. We have used engineered recombinant antibodies detecting the pentameric protein CRP as a model analyte system, and tested different assay formats. We describe also the construction of a time-resolved scanning epifluorometer with which we could measure the FRET interaction between the slow fluorescence decay from europium chelates and its energy transfer to the rapidly decaying fluorophore Cy5.

  11. Sizes of water-soluble luminescent quantum dots measured by fluorescence correlation spectroscopy

    Zhang Pudun; Li Liang; Dong Chaoqing; Qian Huifeng; Ren Jicun

    2005-01-01

    In this paper, fluorescence correlation spectroscopy (FCS) was applied to measure the size of water-soluble quantum dots (QDs). The measurements were performed on a home-built FCS system based on the Stokes-Einstein equation. The obtained results showed that for bare CdTe QDs the sizes from FCS were larger than the ones from transmission electron microscopy (TEM). The brightness of QDs was also evaluated using FCS technique. It was found that the stability of the surface chemistry of QDs would be significantly improved by capping it with hard-core shell. Our data demonstrated that FCS is a simple, fast, and effective method for characterizing the fluorescent quantum dots, and is especially suitable for determining the fluorescent nanoparticles less than 10 nm in water solution

  12. Mechanism of blue-light-induced plasma-membrane depolarization in etiolated cucumber hypocotyls

    Spalding, E. P.; Cosgrove, D. J.

    1992-01-01

    A large, transient depolarization of the plasma membrane precedes the rapid blue-light (BL)-induced growth suppression in etiolated seedlings of Cucumis sativus L. The mechanism of this voltage transient was investigated by applying inhibitors of ion channels and the plasma-membrane H(+)-ATPase, by manipulating extracellular ion concentrations, and by measuring cell input resistance and ATP levels. The depolarizing phase was not affected by Ca(2+)-channel blockers (verapamil, La3+) or by reducing extracellular free Ca2+ by treatment with ethylene glycol-bis(beta-aminoethyl ether)-N,N,N',N'-tetraacetic acid (EGTA). However, these treatments did reduce the rate of repolarization, indicating an inward movement of Ca2+ is involved. No effects of the K(+)-channel blocker tetraethylammonium (TEA+) were detected. Vanadate and KCN, used to inhibit the H(+)-ATPase, reduced or completely inhibited the BL-induced depolarization. Levels of ATP increased by 11-26% after 1-2 min of BL. Input resistance of trichrome cells, measured with double-barreled microelectrodes, remained constant during the onset of the depolarization but decreased as the membrane voltage became more positive than -90 mV. The results indicate that the depolarization mechanism initially involves inactivation of the H(+)-ATPase with subsequent transient activation of one or more types of ion channels.

  13. Site-specific multipoint fluorescence measurement system with end-capped optical fibers.

    Song, Woosub; Moon, Sucbei; Lee, Byoung-Cheol; Park, Chul-Seung; Kim, Dug Young; Kwon, Hyuk Sang

    2011-07-10

    We present the development and implementation of a spatially and spectrally resolved multipoint fluorescence correlation spectroscopy (FCS) system utilizing multiple end-capped optical fibers and an inexpensive laser source. Specially prepared end-capped optical fibers placed in an image plane were used to both collect fluorescence signals from the sample and to deliver signals to the detectors. The placement of independently selected optical fibers on the image plane was done by monitoring the end-capped fiber tips at the focus using a CCD, and fluorescence from specific positions of a sample were collected by an end-capped fiber, which could accurately represent light intensities or spectral data without incurring any disturbance. A fast multipoint spectroscopy system with a time resolution of ∼1.5 ms was then implemented using a prism and an electron multiplying charge coupled device with a pixel binning for the region of interest. The accuracy of our proposed system was subsequently confirmed by experimental results, based on an FCS analysis of microspheres in distilled water. We expect that the proposed multipoint site-specific fluorescence measurement system can be used as an inexpensive fluorescence measurement tool to study many intracellular and molecular dynamics in cell biology. © 2011 Optical Society of America

  14. Linear Depolarization of Lidar Returns by Aged Smoke Particles

    Mishchenko, Michael I.; Dlugach, Janna M.; Liu, Li

    2016-01-01

    We use the numerically exact (superposition) T-matrix method to analyze recent measurements of the backscattering linear depolarization ratio (LDR) for a plume of aged smoke at lidar wavelengths ranging from 355 to 1064 nm. We show that the unique spectral dependence of the measured LDRs can be modeled, but only by assuming expressly nonspherical morphologies of smoke particles containing substantial amounts of nonabsorbing (or weakly absorbing) refractory materials such as sulfates. Our results demonstrate that spectral backscattering LDR measurements can be indicative of the presence of morphologically complex smoke particles, but additional (e.g., passive polarimetric or bistatic lidar) measurements may be required for a definitive characterization of the particle morphology and composition.

  15. Currents of thermally stimulated depolarization in CaIn2S4 single crystals

    Tagiev, B.G.; Tagiev, O.B.; Dzhabbarov, R.B.; Musaeva, N.N.

    1996-01-01

    The results of investigation into currents of thermally stimulated depolarization in CaIn 2 S 4 monocrystals are presented for the first time. Spectra of thermally stimulated depolarization for In-CaIn S4 -In structures are measured under T=99 K at various rates of heat, times of polarization and times of expectation following switching off of electrical field up to beginning of measurements of shorting. The main parameters of capture cross section, partial factor, concentration of traps, are determined. It is determined that one may observed a biomolecular mechanism with a strong secondary capture in CaIn 2 S 4 monocrystals. 9 refs.; 4 figs

  16. 10 CFR Appendix Q to Subpart B of... - Uniform Test Method for Measuring the Energy Consumption of Fluorescent Lamp Ballasts

    2010-01-01

    ... 10 Energy 3 2010-01-01 2010-01-01 false Uniform Test Method for Measuring the Energy Consumption... Appendix Q to Subpart B of Part 430—Uniform Test Method for Measuring the Energy Consumption of Fluorescent... reference; see § 430.3). The test for measuring standby mode energy consumption of fluorescent lamp ballasts...

  17. SmartFluo: A Method and Affordable Adapter to Measure Chlorophyll a Fluorescence with Smartphones

    Friedrichs, Anna; Busch, Julia; van der Woerd, H.J.; Zielinski, Oliver

    2017-01-01

    In order to increase the monitoring capabilities of inland and coastal waters, there is a need for new, affordable, sensitive and mobile instruments that could be operated semi-automatically in the field. This paper presents a prototype device to measure chlorophyll a fluorescence: the SmartFluo.

  18. Fast, versatile x-ray fluorescence method for measuring tin in impregnated wood

    Drabæk, I.; Christensen, Leif Højslet

    1985-01-01

    The present paper describes an energy-dispersive x-ray fluorescence method for measuring tin in bis(tri-n-butyl)tin-oxide impregnated wood. The proposed method is of the backscatter/fundamental parameter type. Its versatility, precision, and accuracy is demonstrated by analyses of eleven samples...

  19. Formation of nitric oxide in an industrial burner measured by 2-D laser induced fluorescence

    Arnold, A; Bombach, R; Kaeppeli, B [Paul Scherrer Inst. (PSI), Villigen (Switzerland)

    1997-06-01

    We have performed two-dimensional Laser Induced Fluorescence (2-D LIF) measurements of nitric oxide and hydroxyl radical distributions in an industrial burner at atmospheric pressure. The relative 2-D LIF data of NO were set to an absolute scale by calibration with probe sampling combined with gas analysis. (author) 3 figs., 7 refs.

  20. Calibration procedure and wavelength correction for neutron depolarization experiments

    Roest, W.; Rekveldt, M.T.

    1992-01-01

    The neutron polarimeter, for which an extended calibration procedure is described here, enables one to investigate magnetic properties of materials. Such an investigation is carried out by offering a polarized neutron beam in the x-, y- and z-direction successively and, after transmission through the sample, by analysing the polarization in all three directions. The result is a 3x3 depolarization matrix. After the polarizer, the neutron beam has a polarization along the z-direction. Two coil systems creating a magnetic field in the yz-plane perpendicular to the beam direction provide the possibility to direct the polarization in the x-, y- and z-direction by means of Larmor precession of the polarization in these fields. New research areas, where small depolarization effects together with considerable polarization rotation are measured, have caused a need for more accuracy in, and better knowledge of the calibration of the polarimeter. The calibration procedure use up to now and the improvements made on it are described. (orig.)

  1. Remote sensing of chlorophyll a fluorescence of vegetation canopies. 1. Near and far field measurement techniques

    Cecchi, G.; Mazzinghi, P.; Pantani, L.; Valentini, R.; Tirelli, D.; De Angelis, P.

    1994-01-01

    This article presents instruments and techniques, used in several vegetation monitoring experiments. Simultaneous monitoring was performed with different approaches, including fluorescence lidar and passive remote sensing, leaf level reflectance, and laser fluorimetry, and compared with physiological measurements. Most of the instrumentation described was designed and built for this application. Experiments were carried out in the laboratory and in the field, to investigate the relationship between chlorophyll fluorescence spectra and plant ecophysiology. Remote sensing, spectroscopy, and ecophysiology data were then collected by an intensive research team, joining different experiences and working in national and international projects

  2. Measurement of the average L-shell fluorescence yields in elements 40<=Z<=53

    Singh, N; Mittal, R; Allawadhi, K L; Sood, B S [Punjabi Univ., Patiala (India). Dept. of Physics

    1983-12-01

    The average L-shell fluorescence yields in Zr, Nb, Mo, Ag, Cd, In, Sn and I have been measured using photo-ionization for creating the vacancies. The present results are found to agree well with those calculated using the values of L-subshell fluorescence yields and Coster-Kronig yields of Krause et al., but are lower than the only available experimental results of Lay. To the best of our knowledge, the values in Nb, Cd, In and I are reported for the first time.

  3. Tune space manipulations in jumping depolarizing resonances

    Ratner, L.G.; Ahrens, L.A.

    1987-01-01

    In February 1986, the AGS polarized beam reached a momentum of 22 GeV/c with a 45% polarization and an intensity of 1 to 2 x 10 10 polarized protons per pulse at a repetition rate of 2.1 seconds. In order to achieve this, one had to overcome the effect of some 40 depolarizing resonances. In our first commissioning run in 1984, we had reached 16.5 GeV/c using, with suitable modifications, the conventional techniques first used at the Argonne ZGS. This worked well, but we found that the fast tune shifts required to cross the intrinsic depolarizing resonances were causing an increase in beam emittance which led to the need for stronger corrections later in the cycle and to diminished extraction efficiency. For the 1986 run, we were prepared to minimize this emittance growth by the application of slow quadrupole pulses to change the region in tune space in which we operated the first tune quads. In this paper we give a brief description of the conventional corrections, but our main emphasis is on the descriptions of tune space manipulations

  4. Spreading depolarizations and late secondary insults after traumatic brain injury

    Hartings, Jed A; Strong, Anthony J; Fabricius, Martin

    2009-01-01

    Here we investigated the incidence of cortical spreading depolarizations (spreading depression and peri-infarct depolarization) after traumatic brain injury (TBI) and their relationship to systemic physiologic values during neurointensive care. Subdural electrode strips were placed on peri......-contusional cortex in 32 patients who underwent surgical treatment for TBI. Prospective electrocorticography was performed during neurointensive care with retrospective analysis of hourly nursing chart data. Recordings were 84 hr (median) per patient and 2,503 hr in total. In 17 patients (53%), 280 spreading...... depolarizations (spreading depressions and peri-infarct depolarizations) were observed. Depolarizations occurred in a bimodal pattern with peak incidence on days 1 and 7. The probability of a depolarization occurring increased significantly as a function of declining mean arterial pressure (MAP; R(2) = 0.78; p...

  5. Measurement of fluorescent probes concentration ratio in the cerebrospinal fluid for early detection of Alzheimer's disease

    Harbater, Osnat; Gannot, Israel

    2014-03-01

    The pathogenic process of Alzheimer's Disease (AD), characterized by amyloid plaques and neurofibrillary tangles in the brain, begins years before the clinical diagnosis. Here, we suggest a novel method which may detect AD up to nine years earlier than current exams, minimally invasive, with minimal risk, pain and side effects. The method is based on previous reports which relate the concentrations of biomarkers in the Cerebrospinal Fluid (CSF) (Aβ and Tau proteins) to the future development of AD in mild cognitive impairment patients. Our method, which uses fluorescence measurements of the relative concentrations of the CSF biomarkers, replaces the lumbar puncture process required for CSF drawing. The process uses a miniature needle coupled trough an optical fiber to a laser source and a detector. The laser radiation excites fluorescent probes which were prior injected and bond to the CSF biomarkers. Using the ratio between the fluorescence intensities emitted from the two biomarkers, which is correlated to their concentration ratio, the patient's risk of developing AD is estimated. A theoretical model was developed and validated using Monte Carlo simulations, demonstrating the relation between fluorescence emission and biomarker concentration. The method was tested using multi-layered tissue phantoms simulating the epidural fat, the CSF in the sub-arachnoid space and the bone. These phantoms were prepared with different scattering and absorption coefficients, thicknesses and fluorescence concentrations in order to simulate variations in human anatomy and in the needle location. The theoretical and in-vitro results are compared and the method's accuracy is discussed.

  6. Conditional-sampling spectrograph detection system for fluorescence measurements of individual airborne biological particles

    Nachman, Paul; Pinnick, R. G.; Hill, Steven C.; Chen, Gang; Chang, Richard K.; Mayo, Michael W.; Fernandez, Gilbert L.

    1996-03-01

    We report the design and operation of a prototype conditional-sampling spectrograph detection system that can record the fluorescence spectra of individual, micrometer-sized aerosols as they traverse an intense 488-nm intracavity laser beam. The instrument's image-intensified CCD detector is gated by elastic scattering or by undispersed fluorescence from particles that enter the spectrograph's field of view. It records spectra only from particles with preselected scattering-fluorescence levels (a fiber-optic-photomultiplier subsystem provides the gating signal). This conditional-sampling procedure reduces data-handling rates and increases the signal-to-noise ratio by restricting the system's exposures to brief periods when aerosols traverse the beam. We demonstrate these advantages by reliably capturing spectra from individual fluorescent microspheres dispersed in an airstream. The conditional-sampling procedure also permits some discrimination among different types of particles, so that spectra may be recorded from the few interesting particles present in a cloud of background aerosol. We demonstrate such discrimination by measuring spectra from selected fluorescent microspheres in a mixture of two types of microspheres, and from bacterial spores in a mixture of spores and nonfluorescent kaolin particles.

  7. Laser induced fluorescence thermometry (LIF-T) as a non-invasive temperature measurement technique for thermal hydraulic experiments

    Strack, J.; Leung, K.; Walker, A., E-mail: strackj@mcmaster.ca [McMaster Univ., Hamilton, ON (Canada)

    2014-07-01

    Laser induced fluorescence (LIF) is an experimental technique whereby a scalar field in a fluid system is measured optically from the fluorescence intensity of a tracer dye following excitation by laser light. For laser induced fluorescence thermometry (LIF-T), a temperature sensitive dye is used. Through the use of a temperature sensitive tracer dye, sheet laser optics, optical filters, and photography, a 2D temperature field can be measured non-invasively. An experiment to test the viability of using LIF-T for macroscopic thermal hydraulic experiments was developed and tested. A reference calibration curve to relate fluorescence measurements to temperature is presented. (author)

  8. Spreading convulsions, spreading depolarization and epileptogenesis in human cerebral cortex

    Dreier, Jens P; Major, Sebastian; Pannek, Heinz-Wolfgang

    2012-01-01

    Spreading depolarization of cells in cerebral grey matter is characterized by massive ion translocation, neuronal swelling and large changes in direct current-coupled voltage recording. The near-complete sustained depolarization above the inactivation threshold for action potential generating...... stimulations. Eventually, epileptic field potentials were recorded during the period that had originally seen spreading depression of activity. Such spreading convulsions are characterized by epileptic field potentials on the final shoulder of the large slow potential change of spreading depolarization. We...

  9. Determination of the cathode fall voltage in fluorescent lamps by measurement of the operating voltage

    Hilscher, A.

    2002-01-01

    A new method for the determination of the cathode fall voltage of fluorescent lamps is shown. The cathode fall voltage can be determined by measurement of the lamp operating voltage at constant lamp wall temperature, constant discharge current and variation of the electrode heating current. Commercial lamps, which do not need to be specially prepared, can be used for the measurement. The results show good correlation to other measurements of the cathode fall voltage at various discharge currents by means of capacitive coupling. The measured values of the cathode fall voltage are used for determining the minimum, target and maximum setting of the sum of the squares of the pin currents of one electrode (the so-called SOS value) as a function of the discharge current in fluorescent lamp dimming. (author)

  10. Measurements of fluorescence lifetime of group III metalo-8-quinolinolates and their use in analytical chemistry

    Nishikawa, Y; Hiraki, K; Morishige, K; Takahashi, K [Kinki Univ., Higashi-Osaka, Osaka (Japan). Faculty of Science and Technology; Shigematsu, T

    1976-07-01

    8-Quinolinolates of aluminum, gallium, and indium in chloroform exhibit strong yellowish green fluorescence with an emission maximum at 510, 526, and 528 nm, respectively. The time resolved fluorescence spectra and the fluorescence lifetime properties of these chelates were measured with a time-resolved spectrofluorometer. The fluorescence intensity of these chelates decays exponentially with time t, and obeys the following equation: F=F/sub 0/e-t/tau=F/sub 0/e-k sub(f).t where F/sub 0/ and F are the fluorescence intensity when the exciting light is irradiating and shut off, respectively; tau and k sub(f) being the lifetime and the rate constant for the process of fluorescence emission. The lifetimes of these chelates in chloroform solution at the ordinary temperature were 17.8, 10.1, and 8.4 ns for Al(C/sub 9/H/sub 6/ON)/sub 3/, Ga(C/sub 9/H/sub 6/ON)/sub 3/, and In(C/sub 9/H/sub 6/ON)/sub 3/, respectively. Thus, 8-quinolinolates of group III metals emit the same type radiation with different lifetimes. Between Al-chelate and In-chelate, there were significant difference in the lifetime by 9.4 ns. Then, the logarithmic plot of the composite fluorescence intensity against time is the overlap of some straight lines with different slopes which indicate k sub(f) of various decay processes. The linear portion of the logarithmic plot of the composite fluorescence intensity corresponded to the longer lifetime component (Al-chelate), and by substracting this component from the whole one, the straight line due to the shorter lifetime component (In-chelate) is obtained. Aluminum and indium contents were then determined by comparing the fluorescence intensity of the sample with that of the standard at a definite time (extrapolated to t=0). By using this composite decay curve, the composition of mixtures of nx10/sup -4/ mol/l of Al and In-chelates in chloroform could be determined.

  11. Monitoring sperm mitochondrial respiration response in a laser trap using ratiometric fluorescence

    Mei, Adrian; Botvinick, Elliot; Berns, Michael

    2005-08-01

    Sperm motility is an important area in understanding male infertility. Various techniques, such as the Computer Assisted Sperm Analysis (CASA), have been used to understand sperm motility. Sperm motility is related to the energy (ATP) production of sperm. ATP is produced by the depolarization of the membrane potential of the inner membrane of the mitochondria. In this study, a mitochondrial dye, JC-1, has been used to monitor the energetics of the mitochondria. This fluorescent dye can emit at two different wavelengths, depending on the membrane potential of the mitochondria. It can fluoresce green at low membrane potential and red at high membrane potential. The ratio of the two colors (red/green) allows for an accurate measurement of the change of membrane potential. Various experiments were conducted to quantify the behavior of the dye within the sperm and the reaction of the sperm to trap. Sperm were trapped using laser tweezers. Results have shown that the ratio drops dramatically when sperm are trapped, indicating a depolarization of the membrane. The physiological response to this depolarization is yet to be determined, but the studies indicate that the sperm could have been slightly damaged by the laser. However, knowing that sperm depolarizes their membrane when trapped can help understand how sperm react to their environment and consequently help treat male infertility.

  12. Effect of biofilm on fluorescence measurements derived from fast repetition rate fluorometers

    Patil, J.S.; Saino, T.

    primary production per se. FRRF offers rapid, real time and in situ measurements of photosynthetic characteristics of natural assemblages of marine and freshwater phytoplankton populations (eg Moore et al. 2003 & 2005, Kaiblinger & Dokulil 2006, Mino... et al. 2013) as well as on the reef building corals (Lesser & Gorbunov 2001). The basis of FRRF technique is to measure fluorescence transients induced by a rapid train of sub-saturating excitation flashlets, where the intensity, duration, and time...

  13. Temperature measurement in a compressible flow field using laser-induced iodine fluorescence

    Fletcher, D. G.; Mcdaniel, J. C.

    1987-01-01

    The thermometric capability of a two-line fluorescence technique using iodine seed molecules in air is investigated analytically and verified experimentally in a known steady compressible flow field. Temperatures ranging from 165 to 295 K were measured in the flowfield using two iodine transitions accessed with a 30-GHz dye-laser scan near 543 nm. The effect of pressure broadening on temperature measurement is evaluated.

  14. Beam depolarization and gain saturation in neodymium rods with a diameter of 85 mm

    Sukhanov, V N; Ugodenko, A A

    1990-04-01

    Depolarization and gain saturation were investigated in rod amplifiers using phosphate and silicate Nd glasses 85 mm in diameter and 300 mm in length at a pulse duration of 35 ns. Total depolarization losses over the rod cross section were measured for various radial distributions of the small-signal gain. For the phosphate glass the losses amounted to 3-6 percent; for the silicate glass, they amounted to 4-7 percent. Saturation energy densities of 4.5 + or - 0.4 and 8.0 + or - 0.7 J/sq cm were obtained for the phosphate and silicate glass, respectively. 8 refs.

  15. Measuring Photosynthetic Response to Drought Stress using Active and Passive Fluorescence

    Helm, L.; Lerdau, M.; Wang, W.; Yang, X.

    2017-12-01

    Photosynthesis, the endothermic reactions involving the absorption of light and fixation and reduction of carbon dioxide by plants, plays important roles in carbon and water cycles, food security, and even weather and climate patterns. Solar radiation provides the energy for photosynthesis, but often plants absorb more solar energy than they can use to reduce carbon dioxide. This excess energy, which is briefly stored as high-energy electrons in the chloroplast, must be removed or damage to the leaf's photosynthetic machinery will occur. One important energy dissipation pathway is for the high energy electrons to return to their lower valance state and, in doing so, release radiation (fluorescence). This fluorescence (known as solar induced fluorescence (SIF) has been found to strongly correlate with gross photosynthesis. Recent advances in the remote sensing of SIF allow for large-scale real-time estimation of photosynthesis. In a warming climate with more frequent stress, remote sensing is necessary for measuring the spatial and temporal variability of photosynthesis. However, the mechanisms that link SIF and photosynthesis are unclear, particularly how the relationship may or may not change under stress. We present data from leaf-level measurements of gas exchange, pulse amplitude modulation (PAM) fluorescence, and SIF in two major tree species in North America. Water-stressed and well-watered plants were compared to determine how SIF and carbon dioxide exchange are modulated by drought diurnally and seasonally. Secondly, photosynthesis and fluorescence under high and low oxygen concentrations were compared to determine how photorespiration alters the relationship between SIF and gross photosynthesis. We find a strong correlation between SIF and steady-state fluorescence measured with conventional PAM fluorometry. Our results also indicate that drought-stress modulates the SIF-photosynthesis relationship, and this may be driven by drought-induced changes in

  16. Rayleigh scattering and depolarization ratio in linear alkylbenzene

    Liu, Qian; Zhou, Xiang; Huang, Wenqian; Zhang, Yuning; Wu, Wenjie; Luo, Wentai; Yu, Miao; Zheng, Yangheng; Zhou, Li; Cao, Jun; Wang, Yifang

    2015-01-01

    It is planned to use linear alkylbenzene (LAB) as the organic solvent for the Jiangmen Underground Neutrino Observatory (JUNO) liquid scintillator detectors, due to its ultra-transparency. However, the current Rayleigh scattering length calculation for LAB disagrees with the experimental measurement. This paper reports for the first time that the Rayleigh scattering of LAB is anisotropic, with a depolarization ratio of 0.31±0.01(stat.)±0.01(sys.). We use an indirect method for Rayleigh scattering measurement with the Einstein–Smoluchowski–Cabannes formula, and the Rayleigh scattering length of LAB is determined to be 28.2±1.0 m at 430 nm

  17. Quantum measurement and orientation tracking of fluorescent nanodiamonds inside living cells

    McGuinness, L. P.; Yan, Y.; Stacey, A.; Simpson, D. A.; Hall, L. T.; MacLaurin, D.; Prawer, S.; Mulvaney, P.; Wrachtrup, J.; Caruso, F.; Scholten, R. E.; Hollenberg, L. C. L.

    2011-06-01

    Fluorescent particles are routinely used to probe biological processes. The quantum properties of single spins within fluorescent particles have been explored in the field of nanoscale magnetometry, but not yet in biological environments. Here, we demonstrate optically detected magnetic resonance of individual fluorescent nanodiamond nitrogen-vacancy centres inside living human HeLa cells, and measure their location, orientation, spin levels and spin coherence times with nanoscale precision. Quantum coherence was measured through Rabi and spin-echo sequences over long (>10 h) periods, and orientation was tracked with effective 1° angular precision over acquisition times of 89 ms. The quantum spin levels served as fingerprints, allowing individual centres with identical fluorescence to be identified and tracked simultaneously. Furthermore, monitoring decoherence rates in response to changes in the local environment may provide new information about intracellular processes. The experiments reported here demonstrate the viability of controlled single spin probes for nanomagnetometry in biological systems, opening up a host of new possibilities for quantum-based imaging in the life sciences.

  18. Time-resolved and temperature tuneable measurements of fluorescent intensity using a smartphone fluorimeter.

    Hossain, Md Arafat; Canning, John; Yu, Zhikang; Ast, Sandra; Rutledge, Peter J; Wong, Joseph K-H; Jamalipour, Abbas; Crossley, Maxwell J

    2017-05-30

    A smartphone fluorimeter capable of time-based fluorescence intensity measurements at various temperatures is reported. Excitation is provided by an integrated UV LED (λ ex = 370 nm) and detection obtained using the in-built CMOS camera. A Peltier is integrated to allow measurements of the intensity over T = 10 to 40 °C. All components are controlled using a smartphone battery powered Arduino microcontroller and a customised Android application that allows sequential fluorescence imaging and quantification every δt = 4 seconds. The temperature dependence of fluorescence intensity for four emitters (rhodamine B, rhodamine 6G, 5,10,15,20-tetraphenylporphyrin and 6-(1,4,8,11-tetraazacyclotetradecane)2-ethyl-naphthalimide) are characterised. The normalised fluorescence intensity over time of the latter chemosensor dye complex in the presence of Zn 2+ is observed to accelerate with an increasing rate constant, k = 1.94 min -1 at T = 15 °C and k = 3.64 min -1 at T = 30 °C, approaching a factor of ∼2 with only a change in temperature of ΔT = 15 °C. Thermally tuning these twist and bend associated rates to optimise sensor approaches and device applications is proposed.

  19. Measurement of drug-target engagement in live cells by two-photon fluorescence anisotropy imaging.

    Vinegoni, Claudio; Fumene Feruglio, Paolo; Brand, Christian; Lee, Sungon; Nibbs, Antoinette E; Stapleton, Shawn; Shah, Sunil; Gryczynski, Ignacy; Reiner, Thomas; Mazitschek, Ralph; Weissleder, Ralph

    2017-07-01

    The ability to directly image and quantify drug-target engagement and drug distribution with subcellular resolution in live cells and whole organisms is a prerequisite to establishing accurate models of the kinetics and dynamics of drug action. Such methods would thus have far-reaching applications in drug development and molecular pharmacology. We recently presented one such technique based on fluorescence anisotropy, a spectroscopic method based on polarization light analysis and capable of measuring the binding interaction between molecules. Our technique allows the direct characterization of target engagement of fluorescently labeled drugs, using fluorophores with a fluorescence lifetime larger than the rotational correlation of the bound complex. Here we describe an optimized protocol for simultaneous dual-channel two-photon fluorescence anisotropy microscopy acquisition to perform drug-target measurements. We also provide the necessary software to implement stream processing to visualize images and to calculate quantitative parameters. The assembly and characterization part of the protocol can be implemented in 1 d. Sample preparation, characterization and imaging of drug binding can be completed in 2 d. Although currently adapted to an Olympus FV1000MPE microscope, the protocol can be extended to other commercial or custom-built microscopes.

  20. Direct measurement of the fluorescence characteristics of aquatic humic substances by a three-dimensional fluorescence spectrophotometer

    Nagao, Seiya; Senoo, Muneaki; Suzuki, Yasuhiro; Nakaguchi, Yuzuru; Hiraki, Keizo.

    1997-01-01

    Humic substances play an important role in the transport of trace metals and insoluble organic materials. They are also considered to be precursors of trihalomethane in aquatic environments. The direct measurement of humic substances was carried out with a three-dimensional fluorescence spectrophotometer after filtering natural-water samples through a GF/F glass fiber filter. Because the influence of the humic concentration, pH and ionic strength on the three-dimensional excitation emission matrix spectra is negligible, the proposed method can be directly applied to the characterization of humic substances in freshwater samples (humic concentration 0.5-10 mg 1 -1 , pH6-9 and ionic strength <0.04 M) and sea-water samples (ionic strength 0.75 M). Humic substances in river, lake and pore water samples exhibit 2-3 peaks at excitation 305-340 nm/emission 415-440 nm and excitation 250-270 nm/emission 440-450 nm. These peak positions correspond to those of fulvic acids isolated from soil. (author)

  1. Strong Resilience of Topological Codes to Depolarization

    H. Bombin

    2012-04-01

    Full Text Available The inevitable presence of decoherence effects in systems suitable for quantum computation necessitates effective error-correction schemes to protect information from noise. We compute the stability of the toric code to depolarization by mapping the quantum problem onto a classical disordered eight-vertex Ising model. By studying the stability of the related ferromagnetic phase via both large-scale Monte Carlo simulations and the duality method, we are able to demonstrate an increased error threshold of 18.9(3% when noise correlations are taken into account. Remarkably, this result agrees within error bars with the result for a different class of codes—topological color codes—where the mapping yields interesting new types of interacting eight-vertex models.

  2. Spatially resolved density and ionization measurements of shocked foams using x-ray fluorescence

    MacDonald, M. J.; Keiter, P. A.; Montgomery, D. S.; Scott, H. A.; Biener, M. M.; Fein, J. R.; Fournier, K. B.; Gamboa, E. J.; Kemp, G. E.; Klein, S. R.; Kuranz, C. C.; LeFevre, H. J.; Manuel, M. J. -E.; Wan, W. C.; Drake, R. P.

    2016-09-28

    We present experiments at the Trident laser facility demonstrating the use of x-ray fluorescence (XRF) to simultaneously measure density, ionization state populations, and electron temperature in shocked foams. An imaging x-ray spectrometer obtained spatially resolved measurements of Ti K-α emission. Density profiles were measured from K-α intensity. Ti ionization state distributions and electron temperatures were inferred by fitting K-α spectra to spectra from CRETIN simulations. This work shows that XRF provides a powerful tool to complement other diagnostics to make equation of state measurements of shocked materials containing a suitable tracer element.

  3. Normal chemotaxis in Dictyostelium discoideum cells with a depolarized plasma membrane potential

    Duijn, Bert van; Vogelzang, Sake A.; Ypey, Dirk L.; Molen, Loek G. van der; Haastert, Peter J.M. van

    1990-01-01

    We examined a possible role for the plasma membrane potential in signal transduction during cyclic AMP-induced chemotaxis in the cellular slime mold Dictyostelium discoideum. Chemotaxis, cyclic GMP and cyclic AMP responses in cells with a depolarized membrane potential were measured. Cells can be

  4. An Intelligent Optical Dissolved Oxygen Measurement Method Based on a Fluorescent Quenching Mechanism.

    Li, Fengmei; Wei, Yaoguang; Chen, Yingyi; Li, Daoliang; Zhang, Xu

    2015-12-09

    Dissolved oxygen (DO) is a key factor that influences the healthy growth of fishes in aquaculture. The DO content changes with the aquatic environment and should therefore be monitored online. However, traditional measurement methods, such as iodometry and other chemical analysis methods, are not suitable for online monitoring. The Clark method is not stable enough for extended periods of monitoring. To solve these problems, this paper proposes an intelligent DO measurement method based on the fluorescence quenching mechanism. The measurement system is composed of fluorescent quenching detection, signal conditioning, intelligent processing, and power supply modules. The optical probe adopts the fluorescent quenching mechanism to detect the DO content and solves the problem, whereas traditional chemical methods are easily influenced by the environment. The optical probe contains a thermistor and dual excitation sources to isolate visible parasitic light and execute a compensation strategy. The intelligent processing module adopts the IEEE 1451.2 standard and realizes intelligent compensation. Experimental results show that the optical measurement method is stable, accurate, and suitable for online DO monitoring in aquaculture applications.

  5. Application of x-ray fluorescence to the measurement of additives in paper

    Buchnea, A.; McNelles, L.A.; Sinclair, A.H.; Hewitt, J.S.

    1976-01-01

    Titanium dioxide content in paper was measured by x-ray fluorescence analysis using an 55 Fe source and an x-ray proportional counter to determine the feasibility of an on-line instrument. X-ray calibration curves for 60- and 100-g/m 2 paper samples were obtained using neutron activation to measure the titanium dioxide concentration. The predictions of a simple model were in good agreement with the experimental calibration curves. The measurements and calculations were extended to investigate the effects of clay and moisture. The presence of clay has a significant effect on the x-ray fluorescence determination of the titanium dioxide concentration; however, this can be well accounted for by the model. The calculations indicated that the effect of typical moisture levels on the titanium dioxide determination was small and can be ignored. It is not possible to measure the clay content by x-ray fluorescence; however, preliminary results for the determination of calcium carbonate concentration are promising

  6. An Intelligent Optical Dissolved Oxygen Measurement Method Based on a Fluorescent Quenching Mechanism

    Fengmei Li

    2015-12-01

    Full Text Available Dissolved oxygen (DO is a key factor that influences the healthy growth of fishes in aquaculture. The DO content changes with the aquatic environment and should therefore be monitored online. However, traditional measurement methods, such as iodometry and other chemical analysis methods, are not suitable for online monitoring. The Clark method is not stable enough for extended periods of monitoring. To solve these problems, this paper proposes an intelligent DO measurement method based on the fluorescence quenching mechanism. The measurement system is composed of fluorescent quenching detection, signal conditioning, intelligent processing, and power supply modules. The optical probe adopts the fluorescent quenching mechanism to detect the DO content and solves the problem, whereas traditional chemical methods are easily influenced by the environment. The optical probe contains a thermistor and dual excitation sources to isolate visible parasitic light and execute a compensation strategy. The intelligent processing module adopts the IEEE 1451.2 standard and realizes intelligent compensation. Experimental results show that the optical measurement method is stable, accurate, and suitable for online DO monitoring in aquaculture applications.

  7. Error in interpreting field chlorophyll fluorescence measurements: heat gain from solar radiation

    Marler, T.E.; Lawton, P.D.

    1994-01-01

    Temperature and chlorophyll fluorescence characteristics were determined on leaves of various horticultural species following a dark adaptation period where dark adaptation cuvettes were shielded from or exposed to solar radiation. In one study, temperature of Swietenia mahagoni (L.) Jacq. leaflets within cuvettes increased from approximately 36C to approximately 50C during a 30-minute exposure to solar radiation. Alternatively, when the leaflets and cuvettes were shielded from solar radiation, leaflet temperature declined to 33C in 10 to 15 minutes. In a second study, 16 horticultural species exhibited a lower variable: maximum fluorescence (F v :F m ) when cuvettes were exposed to solar radiation during the 30-minute dark adaptation than when cuvettes were shielded. In a third study with S. mahagoni, the influence of self-shielding the cuvettes by wrapping them with white tape, white paper, or aluminum foil on temperature and fluorescence was compared to exposing or shielding the entire leaflet and cuvette. All of the shielding methods reduced leaflet temperature and increased the F v :F m ratio compared to leaving cuvettes exposed. These results indicate that heat stress from direct exposure to solar radiation is a potential source of error when interpreting chlorophyll fluorescence measurements on intact leaves. Methods for moderating or minimizing radiation interception during dark adaptation are recommended. (author)

  8. Measurement of contaminant removal from skin using a portable fluorescence scanning system

    Hession, Helena; Byrne, Miriam; Cleary, S.; Andersson, K.G.; Roed, J.

    2006-01-01

    The residence time of particulate contamination on the human body is a factor that has an important impact on the accuracy of exposure assessment in the aftermath of an accidental release of radionuclides to the atmosphere. Measurements of particle clearance from human skin were made using an illumination system to excite fluorescence in labelled silica particles and a CCD camera and image processing system to detect this fluorescence. The illumination system consists of high-intensity light emitting diodes (LEDS) of suitable wavelengths arranged on a portable stand. The physically small size of the LEDs allows them to be positioned close to the fluorescing surface, thus maximising the fluorescent signal that can be obtained. The limit of detection was found to be 50 μg of tracer particle per cm 2 . Experiments were carried out to determine the clearance rates of 10 μm and 3 μm particles from the skin. Results show that, in the absence of any mechanical rubbing of the skin, the clearance of particles from the skin followed an approximately exponential decay with a half-time of 1.5-7.8 h. Skin hairiness and degree of human movement were found, in addition to particle size, to have an important influence on particle fall-off rate

  9. A Method to Reconstruct the Solar-Induced Canopy Fluorescence Spectrum from Hyperspectral Measurements

    Feng Zhao

    2014-10-01

    Full Text Available A method for canopy Fluorescence Spectrum Reconstruction (FSR is proposed in this study, which can be used to retrieve the solar-induced canopy fluorescence spectrum over the whole chlorophyll fluorescence emission region from 640–850 nm. Firstly, the radiance of the solar-induced chlorophyll fluorescence (Fs at five absorption lines of the solar spectrum was retrieved by a Spectral Fitting Method (SFM. The Singular Vector Decomposition (SVD technique was then used to extract three basis spectra from a training dataset simulated by the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes. Finally, these basis spectra were linearly combined to reconstruct the Fs spectrum, and the coefficients of them were determined by Weighted Linear Least Squares (WLLS fitting with the five retrieved Fs values. Results for simulated datasets indicate that the FSR method could accurately reconstruct the Fs spectra from hyperspectral measurements acquired by instruments of high Spectral Resolution (SR and Signal to Noise Ratio (SNR. The FSR method was also applied to an experimental dataset acquired in a diurnal experiment. The diurnal change of the reconstructed Fs spectra shows that the Fs radiance around noon was higher than that in the morning and afternoon, which is consistent with former studies. Finally, the potential and limitations of this method are discussed.

  10. Neutron depolarization studies on magnetization process using pulsed polarized neutrons

    Mitsuda, Setsuo; Endoh, Yasuo

    1985-01-01

    Neutron depolarization experiments investigating the magnetization processes have been performed by using pulsed polarized neutrons for the first time. Results on both quenched and annealed ferromagnets of Fe 85 Cr 15 alloy indicate the significant difference in the wavelength dependence of depolarization between them. It also constitutes the experimental demonstration of the theoretical prediction of Halpern and Holstein. (author)

  11. Single neuron dynamics during experimentally induced anoxic depolarization

    Zandt, B.; Stigen, Tyler; ten Haken, Bernard; Netoff, Theoden; van Putten, Michel Johannes Antonius Maria

    2013-01-01

    We studied single neuron dynamics during anoxic depolarizations, which are often observed in cases of neuronal energy depletion. Anoxic and similar depolarizations play an important role in several pathologies, notably stroke, migraine, and epilepsy. One of the effects of energy depletion was

  12. Spreading Depression, Spreading Depolarizations, and the Cerebral Vasculature

    Ayata, Cenk; Lauritzen, Martin

    2015-01-01

    Spreading depression (SD) is a transient wave of near-complete neuronal and glial depolarization associated with massive transmembrane ionic and water shifts. It is evolutionarily conserved in the central nervous systems of a wide variety of species from locust to human. The depolarization spreads...

  13. Depolarization Lidar Determination of Cloud-Base Microphysical Properties

    Donovan, D.P.; Klein Baltink, H; Henzing, J. S.; de Roode, S.R.; Siebesma, A.P.

    2016-01-01

    The links between multiple-scattering induced depolarization and cloud microphysical properties (e.g. cloud particle number density, effective radius, water content) have long been recognised. Previous efforts to use depolarization information in a quantitative manner to retrieve cloud

  14. Depolarization of ultracold neutrons during their storage in material bottles

    Serebrov, A.P.; Lasakov, M.S.; Vassiljev, A.V.; Krasnoschekova, I.A.; Rudnev, Yu.P.; Fomin, A.K.; Varlamov, V.E.; Geltenbort, P.; Butterworth, J.; Young, A.R.; Pesavento, U.

    2003-01-01

    The depolarization of ultracold neutrons (UCN) during their storage in traps has been investigated. The neutron spin-flip probability for the materials studied amounts to ∼(1-2)x10 -5 per collision and does not depend on the temperature. The possible connection between the phenomenon of UCN depolarization and that of anomalous losses is discussed

  15. Depolarization of ultracold neutrons during their storage in material bottles

    Serebrov, A.P.; Lasakov, M.S.; Vassiljev, A.V.; Krasnoschekova, I.A.; Rudnev, Yu.P.; Fomin, A.K.; Varlamov, V.E.; Geltenbort, P.; Butterworth, J.; Young, A.R.; Pesavento, U

    2003-07-14

    The depolarization of ultracold neutrons (UCN) during their storage in traps has been investigated. The neutron spin-flip probability for the materials studied amounts to {approx}(1-2)x10{sup -5} per collision and does not depend on the temperature. The possible connection between the phenomenon of UCN depolarization and that of anomalous losses is discussed.

  16. Fluorescence lifetime measurement with confocal endomicroscopy for direct analysis of tissue biochemistry in vivo

    Youngjae Won

    2016-08-01

    Full Text Available Confocal endomicroscopy is a powerful tool for in vivo real-time imaging at cellular resolution inside a living body without tissue resection. Microscopic fluorescence lifetime measurement can provide information about localized biochemical conditions such as pH and the concentrations of oxygen and calcium. We hypothesized that combining these techniques could assist accurate cancer discrimination by providing both biochemical and morphological information. We designed a dual-mode experimental setup for confocal endomicroscopic imaging and fluorescence lifetime measurement and applied it to a mouse xenograft model of activated human pancreatic cancer generated by subcutaneous injection of AsPC-1 tumor cells. Using this method with pH-sensitive sodium fluorescein injection, we demonstrated discrimination between normal and cancerous tissues in a living mouse. With further development, this method may be useful for clinical cancer detection.

  17. Measurement of fluorophore concentrations and fluorescence quantum yield in tissue-simulating phantoms using three diffusion models of steady-state spatially resolved fluorescence

    Diamond, Kevin R; Farrell, Thomas J; Patterson, Michael S [Department of Medical Physics, Juravinski Cancer Centre and McMaster University, 699 Concession Street, Hamilton, Ontario L8V 5C2 (Canada)

    2003-12-21

    Steady-state diffusion theory models of fluorescence in tissue have been investigated for recovering fluorophore concentrations and fluorescence quantum yield. Spatially resolved fluorescence, excitation and emission reflectance were calculated by diffusion theory and Monte Carlo simulations, and measured using a multi-fibre probe on tissue-simulating phantoms containing either aluminium phthalocyanine tetrasulfonate (AlPcS{sub 4}), Photofrin or meso-tetra-(4-sulfonatophenyl)-porphine dihydrochloride (TPPS{sub 4}). The accuracy of the fluorophore concentration and fluorescence quantum yield recovered by three different models of spatially resolved fluorescence were compared. The models were based on: (a) weighted difference of the excitation and emission reflectance, (b) fluorescence due to a point excitation source or (c) fluorescence due to a pencil beam excitation source. When literature values for the fluorescence quantum yield were used for each of the fluorophores, the fluorophore absorption coefficient (and hence concentration) at the excitation wavelengthwas recovered with a root-mean-square accuracy of 11.4% using the point source model of fluorescence and 8.0% using the more complicated pencil beam excitation model. The accuracy was calculated over a broad range of optical properties and fluorophore concentrations. The weighted difference of reflectance model performed poorly, with a root-mean-square error in concentration of about 50%. Monte Carlo simulations suggest that there are some situations where the weighted difference of reflectance is as accurate as the other two models, although this was not confirmed experimentally. Estimates of the fluorescence quantum yield in multiple scattering media were also made by determining independently from the fitted absorption spectrum and applying the various diffusion theory models. The fluorescence quantum yields for AlPcS{sub 4} and TPPS{sub 4} were calculated to be 0.59 {+-} 0.03 and 0.121 {+-} 0

  18. Measurement of fluorophore concentrations and fluorescence quantum yield in tissue-simulating phantoms using three diffusion models of steady-state spatially resolved fluorescence

    Diamond, Kevin R; Farrell, Thomas J; Patterson, Michael S

    2003-01-01

    Steady-state diffusion theory models of fluorescence in tissue have been investigated for recovering fluorophore concentrations and fluorescence quantum yield. Spatially resolved fluorescence, excitation and emission reflectance were calculated by diffusion theory and Monte Carlo simulations, and measured using a multi-fibre probe on tissue-simulating phantoms containing either aluminium phthalocyanine tetrasulfonate (AlPcS 4 ), Photofrin or meso-tetra-(4-sulfonatophenyl)-porphine dihydrochloride (TPPS 4 ). The accuracy of the fluorophore concentration and fluorescence quantum yield recovered by three different models of spatially resolved fluorescence were compared. The models were based on: (a) weighted difference of the excitation and emission reflectance, (b) fluorescence due to a point excitation source or (c) fluorescence due to a pencil beam excitation source. When literature values for the fluorescence quantum yield were used for each of the fluorophores, the fluorophore absorption coefficient (and hence concentration) at the excitation wavelengthwas recovered with a root-mean-square accuracy of 11.4% using the point source model of fluorescence and 8.0% using the more complicated pencil beam excitation model. The accuracy was calculated over a broad range of optical properties and fluorophore concentrations. The weighted difference of reflectance model performed poorly, with a root-mean-square error in concentration of about 50%. Monte Carlo simulations suggest that there are some situations where the weighted difference of reflectance is as accurate as the other two models, although this was not confirmed experimentally. Estimates of the fluorescence quantum yield in multiple scattering media were also made by determining independently from the fitted absorption spectrum and applying the various diffusion theory models. The fluorescence quantum yields for AlPcS 4 and TPPS 4 were calculated to be 0.59 ± 0.03 and 0.121 ± 0.001 respectively using the point

  19. The measurement of attenuation coefficients at low photon energies using fluorescent x-radiation

    Peaple, L.H.J.; White, D.R.

    1978-03-01

    A rapid and accurate method has been developed to measure low energy attenuation coefficients for materials of importance in radiation dosimetry. It employs a collimated beam of fluorescent x-rays from which the required radiation is selected by means of a high resolution germanium detector and multi-channel analyser. The method is described in detail and its accuracy and application outlined with reference to the results from nine different materials. (author)

  20. Ferro-metry and X-ray fluorescence to measure wear

    Catherin, J.Y.

    1997-01-01

    The determination of wear of metallic structures is carried out by measuring metallic particles in the lubricating oil. This method is routinely used by SNCF, the French railroad company to control the motors of the high speed trains (TGV). Four methods, plasma emission spectrometry, X-ray fluorescence analysis, ferro-metry and magnetometry are used. The field of application and advantage of each method is described. (C.B.)

  1. Application of Atomic Fluorescence to Measurement of Combustion Temperature in Solid Propellants.

    1986-12-04

    into a cytal (yttrium- aluminum -garnet) is shown to be an ideal seed, the fluoresce. f which is stimulated by the ultra-violet output of a Nd:YAG...been successfully employed in atmospheric flames for making thermometric measurements. However, because of the amorphous nature of energetic materials...be determined. R. 6 A .6 An example of this type of behavior is found in trivalent dysprosium, doped at 3% in yttrium- aluminum -garnet (Dy+3 :YAG

  2. Direct measurements of neutral density depletion by two-photon absorption laser-induced fluorescence spectroscopy

    Aanesland, A.; Liard, L.; Leray, G.; Jolly, J.; Chabert, P.

    2007-01-01

    The ground state density of xenon atoms has been measured by spatially resolved laser-induced fluorescence spectroscopy with two-photon excitation in the diffusion chamber of a magnetized Helicon plasma. This technique allows the authors to directly measure the relative variations of the xenon atom density without any assumptions. A significant neutral gas density depletion was measured in the core of the magnetized plasma, in agreement with previous theoretical and experimental works. It was also found that the neutral gas density was depleted near the radial walls

  3. Measurement of isotope shift of recycled uranium by laser induced fluorescence spectroscopy

    Oba, Masaki; Wakaida, Ikuo; Akaoka, Katsuaki; Miyabe, Masabumi

    1999-07-01

    Isotope shift of the recycled uranium atoms including the 236 U was measured by laser induced fluorescence method. Eight even levels at 2 eV and three odd levels at 4 eV were measured with isotope shifts among 238 U, 236 U and 235 U obtained. As for the measurement of the 4 eV levels, the Doppler free two photon absorption method was used, and the hyperfine structure of the 235 U was analyzed simultaneously. The isotope shift of 234 U was also observed in the three transition. (J.P.N.)

  4. Measurements of low density, high velocity flow by electron beam fluorescence technique

    Soga, Takeo; Takanishi, Masaya; Yasuhara, Michiru

    1981-01-01

    A low density chamber with an electron gun system was made for the measurements of low density, high velocity (high Mach number) flow. This apparatus is a continuous running facility. The number density and the rotational temperature in the underexpanding free jet of nitrogen were measured along the axis of the jet by the electron beam fluorescence technique. The measurements were carried out from the vicinity of the exit of the jet to far downstream of the first Mach disk. Rotational nonequilibrium phenomena were observed in the hypersonic flow field as well as in the shock wave (Mach disk). (author)

  5. Depolarization-induced release of amino acids from the vestibular nuclear complex.

    Godfrey, Donald A; Sun, Yizhe; Frisch, Christopher; Godfrey, Matthew A; Rubin, Allan M

    2012-04-01

    There is evidence from immunohistochemistry, quantitative microchemistry, and pharmacology for several amino acids as neurotransmitters in the vestibular nuclear complex (VNC), including glutamate, γ-aminobutyrate (GABA), and glycine. However, evidence from measurements of release has been limited. The purpose of this study was to measure depolarization-stimulated calcium-dependent release of amino acids from the VNC in brain slices. Coronal slices containing predominantly the VNC were prepared from rats and perfused with artificial cerebrospinal fluid (ACSF) in an interface chamber. Fluid was collected from the chamber just downstream from the VNC using a microsiphon. Depolarization was induced by 50 mM potassium in either control calcium and magnesium concentrations or reduced calcium and elevated magnesium. Amino acid concentrations in effluent fluid were measured by high performance liquid chromatography. Glutamate release increased fivefold during depolarization in control calcium concentration and twofold in low calcium/high magnesium. These same ratios were 6 and 1.5 for GABA, 2 and 1.3 for glycine, and 2 and 1.5 for aspartate. Differences between release in control and low calcium/high magnesium ACSF were statistically significant for glutamate, GABA, and glycine. Glutamine release decreased during and after depolarization, and taurine release slowly increased. No evidence for calcium-dependent release was found for serine, glutamine, alanine, threonine, arginine, taurine, or tyrosine. Our results support glutamate and GABA as major neurotransmitters in the VNC. They also support glycine as a neurotransmitter and some function for taurine.

  6. In situ observation of sol-gel transition of agarose aqueous solution by fluorescence measurement.

    Wang, Zheng; Yang, Kun; Li, Haining; Yuan, Chaosheng; Zhu, Xiang; Huang, Haijun; Wang, Yongqiang; Su, Lei; Fang, Yapeng

    2018-06-01

    Sol-gel transition behavior of agarose aqueous solution was investigated by using rheology and fluorescence measurement. On heating, the storage modulus G' decreased gradually, then deviated abruptly at the temperature of about 65°C, and finally decreased slowly again. For fluorescence measurement, the phase transition point kept almost at the temperature of 65°C, which was consistent with that in rheology measurement. Upon compression, it was indicated that the fluorescence lifetime for the probe in the agarose aqueous solution showed a dramatic change in the vicinity of the phase transition point. T vs. P phase diagram of agarose aqueous solution was constructed, which showed that the melting point was an increasing function of pressure. Based on the phase diagram, the agarose gels were prepared by cooling under atmospheric pressure and the pressure of 300MPa, respectively. From the result of the recovered samples studied by optical rheometry, it was found that agarose gel prepared under high pressure had a higher elasticity and lower viscosity index, compared with that under atmospheric pressure. It could be speculated that such kinds of properties might be attributed to the smaller pore size during gelation under high pressure. Copyright © 2018. Published by Elsevier B.V.

  7. A fluorescence anisotropy method for measuring protein concentration in complex cell culture media.

    Groza, Radu Constantin; Calvet, Amandine; Ryder, Alan G

    2014-04-22

    The rapid, quantitative analysis of the complex cell culture media used in biopharmaceutical manufacturing is of critical importance. Requirements for cell culture media composition profiling, or changes in specific analyte concentrations (e.g. amino acids in the media or product protein in the bioprocess broth) often necessitate the use of complicated analytical methods and extensive sample handling. Rapid spectroscopic methods like multi-dimensional fluorescence (MDF) spectroscopy have been successfully applied for the routine determination of compositional changes in cell culture media and bioprocess broths. Quantifying macromolecules in cell culture media is a specific challenge as there is a need to implement measurements rapidly on the prepared media. However, the use of standard fluorescence spectroscopy is complicated by the emission overlap from many media components. Here, we demonstrate how combining anisotropy measurements with standard total synchronous fluorescence spectroscopy (TSFS) provides a rapid, accurate quantitation method for cell culture media. Anisotropy provides emission resolution between large and small fluorophores while TSFS provides a robust measurement space. Model cell culture media was prepared using yeastolate (2.5 mg mL(-1)) spiked with bovine serum albumin (0 to 5 mg mL(-1)). Using this method, protein emission is clearly discriminated from background yeastolate emission, allowing for accurate bovine serum albumin (BSA) quantification over a 0.1 to 4.0 mg mL(-1) range with a limit of detection (LOD) of 13.8 μg mL(-1). Copyright © 2014. Published by Elsevier B.V.

  8. Quantitative nitric oxide measurements by means of laser-induced fluorescence in a heavy-duty Diesel engine

    Verbiezen, K.; Vliet, van A.P.; Klein-Douwel, R.J.H.; Ganippa, L.C.; Bougie, H.J.T.; Meerts, W.L.; Dam, N.J.; Meulen, ter J.J.

    2005-01-01

    Quantitative in-cylinder laser-induced fluorescence measurements ofnitric oxide in a heavy-duty Diesel engine are presented. Special attention is paid to experimental techniques to assess the attenuation of the laser beam and the fluorescence signal by the cylinder contents.This attenuation can be

  9. Measurement and quantification of fluorescent changes in ocular tissue using a novel confocal instrument

    Buttenschoen, Kim K.; Girkin, John M.; Daly, Daniel J.

    2014-05-01

    Our sight is a major contributor to our quality of life. The treatment of diseases like macular degeneration and glaucoma, however, presents a challenge as the delivery of medication to ocular tissue is not well understood. The instrument described here will help quantify targeted delivery by non-invasively and simultaneously measuring light reflected from and fluorescence excited in the eye, used as position marker and to track compounds respectively. The measurement concept has been proven by monitoring the diffusion of fluorescein and a pharmaceutical compound for treating open angle glaucoma in vitro in a cuvette and in ex vivo porcine eyes. To obtain a baseline of natural fluorescence we measured the change in corneal and crystalline lens autofluorescence in volunteers over a week. We furthermore present data on 3D ocular autofluorescence. Our results demonstrate the capability to measure the location and concentration of the compound of interest with high axial and temporal resolution of 178 μm and 0.6 s respectively. The current detection limit is 2 nM for fluorescein, and compounds with a quantum yield as low as 0.01 were measured to concentrations below 1 μM. The instrument has many applications in assessing the diffusion of fluorescent compounds through the eye and skin in vitro and in vivo, measuring autofluorescence of ocular tissues and reducing the number of animals needed for research. The instrument has the capability of being used both in the clinical and home care environment opening up the possibility of measuring controlled drug release in a patient friendly manner.

  10. A method of measuring gold nanoparticle concentrations by x-ray fluorescence for biomedical applications

    Wu Di; Li Yuhua; Wong, Molly D.; Liu Hong [Center for Bioengineering and School of Electrical and Computer Engineering, University of Oklahoma, Norman, Oklahoma 73019 (United States)

    2013-05-15

    Purpose: This paper reports a technique that enables the quantitative determination of the concentration of gold nanoparticles (GNPs) through the accurate detection of their fluorescence radiation in the diagnostic x-ray spectrum. Methods: Experimentally, x-ray fluorescence spectra of 1.9 and 15 nm GNP solutions are measured using an x-ray spectrometer, individually and within chicken breast tissue samples. An optimal combination of excitation and emission filters is determined to segregate the fluorescence spectra at 66.99 and 68.80 keV from the background scattering. A roadmap method is developed that subtracts the scattered radiation (acquired before the insertion of GNP solutions) from the signal radiation acquired after the GNP solutions are inserted. Results: The methods effectively minimize the background scattering in the spectrum measurements, showing linear relationships between GNP solutions from 0.1% to 10% weight concentration and from 0.1% to 1.0% weight concentration inside a chicken breast tissue sample. Conclusions: The investigation demonstrated the potential of imaging gold nanoparticles quantitatively in vivo for in-tissue studies, but future studies will be needed to investigate the ability to apply this method to clinical applications.

  11. Rhodamine 800 as reference substance for fluorescence quantum yield measurements in deep red emission range

    Alessi, A., E-mail: andrea.alessi@eni.com [Centro Ricerche per le Energie non Convenzionali, Istituto eni Donegani, e.n.i. S.p.A., Via G. Fauser 4, 28100 Novara (Italy); Salvalaggio, M. [Centro Ricerche per le Energie non Convenzionali, Istituto eni Donegani, e.n.i. S.p.A., Via G. Fauser 4, 28100 Novara (Italy); Ruzzon, G. [HORIBA Jobin Yvon Srl, Via Cesare Pavese 35/AB, 20090 Opera Milano (Italy)

    2013-02-15

    The determination of fluorescence quantum yields ({Phi}{sub f}) of deep red dyes emitting at 635-900 nm is difficult due to lack of suitable standards. In this work, we propose a commercial dye, rhodamine 800 (Rho800), as reference standard which belongs to the family of xanthenes. The quantum yield of rhodamine 800 in absolute ethanol has been studied using a relative method with cresyl violet (CV) and rhodamine 101 (Rho101) as references, and an absolute fluorometric method by integrating sphere measurements. - Highlights: Black-Right-Pointing-Pointer A red emitting dye Rhodamine 800 was electronic spectroscopy characterized. Black-Right-Pointing-Pointer Its fluorescence quantum yield was studied using a relative and an absolute method. Black-Right-Pointing-Pointer The values found are greater than the values currently known in the literature.

  12. Simultaneous measurement of amyloid fibril formation by dynamic light scattering and fluorescence reveals complex aggregation kinetics.

    Aaron M Streets

    Full Text Available An apparatus that combines dynamic light scattering and Thioflavin T fluorescence detection is used to simultaneously probe fibril formation in polyglutamine peptides, the aggregating subunit associated with Huntington's disease, in vitro. Huntington's disease is a neurodegenerative disorder in a class of human pathologies that includes Alzheimer's and Parkinson's disease. These pathologies are all related by the propensity of their associated protein or polypeptide to form insoluble, β-sheet rich, amyloid fibrils. Despite the wide range of amino acid sequence in the aggregation prone polypeptides associated with these diseases, the resulting amyloids display strikingly similar physical structure, an observation which suggests a physical basis for amyloid fibril formation. Thioflavin T fluorescence reports β-sheet fibril content while dynamic light scattering measures particle size distributions. The combined techniques allow elucidation of complex aggregation kinetics and are used to reveal multiple stages of amyloid fibril formation.

  13. Quantitative analysis and metallic coating thickness measurements by X-ray fluorescence

    Negrea, Denis; Ducu, Catalin; Malinovschi, Viorel; Moga, Sorin; Boicea, Niculae

    2009-01-01

    Full text: This paperwork covers the use of X-ray fluorescence (XRF) for determining the concentration and the coating thickness on metallic samples. The analysis method presented here may also be applicable to other coatings, providing that the elemental nature of the coating and substrate are compatible with the technical aspects of XRF, such as the absorption coefficient of the system, primary radiation, fluorescent radiation and type of detection. For the coating thickness measurement it was used the substrate-line attenuation method and a computing algorithm was developed. Its advantage relies in the fact that no special calibration with standard samples having different layer thickness is needed. The samples used for evaluation were metallic pieces of iron with zinc-nickel coatings of different thickness obtained by electrochemical deposition. (authors)

  14. Quantitative analysis and metallic coating thickness measurements by X-ray fluorescence

    Negrea, Denis; Ducu, Catalin; Malinovschi, Viorel; Moga, Sorin; Boicea, Niculae

    2009-01-01

    This work deals with the use of X-ray fluorescence (XRF) for determining the concentration and the coating thickness on metallic samples. The analysis method presented here may also be applicable to other coatings, providing that the elemental nature of the coating and substrate are compatible with the technical aspects of XRF, such as the absorption coefficient of the system, primary radiation, fluorescent radiation and type of detection. For the coating thickness measurement it was used the substrate-line attenuation method and an algorithm was developed. Its advantage relies in the fact that no special calibration with standard samples having different layer thickness is needed. The samples used for evaluation were metallic pieces of iron with zinc-nickel coatings of different thickness obtained by electrochemical deposition. (authors)

  15. Stability of some Cactaceae proteins based on fluorescence, circular dichroism, and differential scanning calorimetry measurements.

    Gorinstein, S; Zemser, M; Vargas-Albores, F; Ochoa, J L; Paredes-Lopez, O; Scheler, C; Aksu, S; Salnikow, J

    1999-02-01

    Characterization of three cactus proteins (native and denatured) from Machaerocereus gummosus (Pitahaya agria), Lophocereu schottii (Garambullo), and Cholla opuntia (Cholla), was based on electrophoretic, fluorescence, CD (circular dichroism), DSC (differential scanning calorimetry), and FT-IR (Fourier transform infrared) measurements. The obtained results of intrinsic fluorescence, DSC, and CD were dissimilar for the three species of cactus, providing evidence of differences in secondary and tertiary structures. Cactus proteins may be situated in the following order corresponding to their relative stability: Machaerocereus gummosus (Pitahaya agria) > Cholla opuntia (Cholla) > Lophocereu schottii (Garambullo). Thermodynamic properties of proteins and their changes upon denaturation (temperature of denaturation, enthalphy, and the number of ruptured hydrogen bonds) were correlated with the secondary structure of proteins and disappearance of alpha-helix.

  16. Measurement of plutonium in spent nuclear fuel by self-induced x-ray fluorescence

    Hoover, Andrew S [Los Alamos National Laboratory; Rudy, Cliff R [Los Alamos National Laboratory; Tobin, Steve J [Los Alamos National Laboratory; Charlton, William S [Los Alamos National Laboratory; Stafford, A [TEXAS A& M; Strohmeyer, D [TEXAS A& M; Saavadra, S [ORNL

    2009-01-01

    Direct measurement of the plutonium content in spent nuclear fuel is a challenging problem in non-destructive assay. The very high gamma-ray flux from fission product isotopes overwhelms the weaker gamma-ray emissions from plutonium and uranium, making passive gamma-ray measurements impossible. However, the intense fission product radiation is effective at exciting plutonium and uranium atoms, resulting in subsequent fluorescence X-ray emission. K-shell X-rays in the 100 keV energy range can escape the fuel and cladding, providing a direct signal from uranium and plutonium that can be measured with a standard germanium detector. The measured plutonium to uranium elemental ratio can be used to compute the plutonium content of the fuel. The technique can potentially provide a passive, non-destructive assay tool for determining plutonium content in spent fuel. In this paper, we discuss recent non-destructive measurements of plutonium X-ray fluorescence (XRF) signatures from pressurized water reactor spent fuel rods. We also discuss how emerging new technologies, like very high energy resolution microcalorimeter detectors, might be applied to XRF measurements.

  17. 3D ion velocity distribution function measurement in an electric thruster using laser induced fluorescence tomography

    Elias, P. Q.; Jarrige, J.; Cucchetti, E.; Cannat, F.; Packan, D.

    2017-09-01

    Measuring the full ion velocity distribution function (IVDF) by non-intrusive techniques can improve our understanding of the ionization processes and beam dynamics at work in electric thrusters. In this paper, a Laser-Induced Fluorescence (LIF) tomographic reconstruction technique is applied to the measurement of the IVDF in the plume of a miniature Hall effect thruster. A setup is developed to move the laser axis along two rotation axes around the measurement volume. The fluorescence spectra taken from different viewing angles are combined using a tomographic reconstruction algorithm to build the complete 3D (in phase space) time-averaged distribution function. For the first time, this technique is used in the plume of a miniature Hall effect thruster to measure the full distribution function of the xenon ions. Two examples of reconstructions are provided, in front of the thruster nose-cone and in front of the anode channel. The reconstruction reveals the features of the ion beam, in particular on the thruster axis where a toroidal distribution function is observed. These findings are consistent with the thruster shape and operation. This technique, which can be used with other LIF schemes, could be helpful in revealing the details of the ion production regions and the beam dynamics. Using a more powerful laser source, the current implementation of the technique could be improved to reduce the measurement time and also to reconstruct the temporal evolution of the distribution function.

  18. Upgrade of goniospectrophtometer GEFE for near-field scattering and fluorescence radiance measurements

    Bernad, Berta; Ferrero, Alejandro; Pons, Alicia; Hernanz, M. L.; Campos, Joaquín.

    2015-03-01

    The goniospectrophotometer GEFE, designed and developed at IO-CSIC (Instituto de Optica, Agencia Estatal Consejo Superior de Investigaciones Cientificas), was conceived to measure the spectral Bidirectional Reflectance Distribution Function (BRDF) at any pair of irradiation and detection directions. Although the potential of this instrument has largely been proved, it still required to be upgraded to deal with some important scattering features for the assessment of the appearance. Since it was not provided with a detector with spatial resolution, it simply could not measure spectrophotometric quantities to characterize texture through the Bidirectional Texture Function (BTF) or translucency through the more complex Bidirectional Scattering-Surface Reflectance Distribution Function (BSSRDF). Another requirement in the GEFE upgrading was to provide it with the capability of measuring fluorescence at different geometries, since some of the new pigments used in industry are fluorescent, which can have a non-negligible impact in the color of the product. Then, spectral resolution at irradiation and detection had to be available in GEFE. This paper describes the upgrading of the goniospectrophotometer GEFE, and its new capabilities through the presentation of sparkle and goniofluorescence measurements. In addition, the potential of the instrument to evaluate translucency by the measurement of the BSSRDF is briefly discussed.

  19. Time resolved measurements of cathode fall in high frequency fluorescent lamps

    Hadrath, S; Garner, R C; Lieder, G H; Ehlbeck, J

    2007-01-01

    Measurements are presented of the time resolved cathode and anode falls of high frequency fluorescent lamps for a range of discharge currents typically encountered in dimming mode. Measurements were performed with the movable anode technique. Supporting spectroscopic emission measurements were made of key transitions (argon 420.1 nm and mercury 435.8 nm), whose onset coincide with cathode fall equalling the value associated with the energy, relative to the ground state, of the upper level of the respective transition. The measurements are in general agreement with the well-known understanding of dimmed lamp operation: peak cathode fall decreases with increasing lamp current and with increasing auxiliary coil heating. However, the time dependence of the measurements offers additional insight

  20. Cardiac Calcium ATPase Dimerization Measured by Cross-Linking and Fluorescence Energy Transfer.

    Blackwell, Daniel J; Zak, Taylor J; Robia, Seth L

    2016-09-20

    The cardiac sarco/endoplasmic reticulum calcium ATPase (SERCA) establishes the intracellular calcium gradient across the sarcoplasmic reticulum membrane. It has been proposed that SERCA forms homooligomers that increase the catalytic rate of calcium transport. We investigated SERCA dimerization in rabbit left ventricular myocytes using a photoactivatable cross-linker. Western blotting of cross-linked SERCA revealed higher-molecular-weight species consistent with SERCA oligomerization. Fluorescence resonance energy transfer measurements in cells transiently transfected with fluorescently labeled SERCA2a revealed that SERCA readily forms homodimers. These dimers formed in the absence or presence of the SERCA regulatory partner, phospholamban (PLB) and were unaltered by PLB phosphorylation or changes in calcium or ATP. Fluorescence lifetime data are compatible with a model in which PLB interacts with a SERCA homodimer in a stoichiometry of 1:2. Together, these results suggest that SERCA forms constitutive homodimers in live cells and that dimer formation is not modulated by SERCA conformational poise, PLB binding, or PLB phosphorylation. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  1. Tracking diurnal changes of photosynthesis and evapotranspiration using fluorescence, gas exchange and hyperspectral remote sensing measurements

    Wang, S.; Zhang, L.; Guanter, L.; Huang, C.

    2017-12-01

    Photosynthesis and evapotranspiration (ET) are the two most important activities of vegetation and make a great contribution to carbon, water and energy exchanges. Remote sensing provides opportunities for monitoring these processes across time and space. This study focuses on tracking diurnal changes of photosynthesis and evapotranspiration over soybean using multiple measurement techniques. Diurnal changes of both remote sensing-based indicators, including active and passive chlorophyll fluorescence and biophysical-related parameters, including photosynthesis rate (photo) and leaf stomatal conductance (cond), were observed. Results showed that both leaf-level steady-state fluorescence (Fs) and canopy-level solar-induced chlorophyll fluorescence were linearly correlated to photosynthetically active radiation (PAR) during the daytime. A double-peak diurnal change curve was observed for leaf-level photo and cond but not for Fs or SIF. Photo and cond showed a strong nonlinear (second-order) correlation, indicating that photosynthesis, which might be remotely sensed by SIF, has the opportunity to track short-term changes of ET. Results presented in this report will be helpful for better understanding the relationship between remote-sensing-based indices and vegetation's biophysical processes.

  2. Simple, fast, and low-cost camera-based water content measurement with colorimetric fluorescent indicator

    Song, Seok-Jeong; Kim, Tae-Il; Kim, Youngmi; Nam, Hyoungsik

    2018-05-01

    Recently, a simple, sensitive, and low-cost fluorescent indicator has been proposed to determine water contents in organic solvents, drugs, and foodstuffs. The change of water content leads to the change of the indicator's fluorescence color under the ultra-violet (UV) light. Whereas the water content values could be estimated from the spectrum obtained by a bulky and expensive spectrometer in the previous research, this paper demonstrates a simple and low-cost camera-based water content measurement scheme with the same fluorescent water indicator. Water content is calculated over the range of 0-30% by quadratic polynomial regression models with color information extracted from the captured images of samples. Especially, several color spaces such as RGB, xyY, L∗a∗b∗, u‧v‧, HSV, and YCBCR have been investigated to establish the optimal color information features over both linear and nonlinear RGB data given by a camera before and after gamma correction. In the end, a 2nd order polynomial regression model along with HSV in a linear domain achieves the minimum mean square error of 1.06% for a 3-fold cross validation method. Additionally, the resultant water content estimation model is implemented and evaluated in an off-the-shelf Android-based smartphone.

  3. Sizing protein-templated gold nanoclusters by time resolved fluorescence anisotropy decay measurements

    Soleilhac, Antonin; Bertorelle, Franck; Antoine, Rodolphe

    2018-03-01

    Protein-templated gold nanoclusters (AuNCs) are very attractive due to their unique fluorescence properties. A major problem however may arise due to protein structure changes upon the nucleation of an AuNC within the protein for any future use as in vivo probes, for instance. In this work, we propose a simple and reliable fluorescence based technique measuring the hydrodynamic size of protein-templated gold nanoclusters. This technique uses the relation between the time resolved fluorescence anisotropy decay and the hydrodynamic volume, through the rotational correlation time. We determine the molecular size of protein-directed AuNCs, with protein templates of increasing sizes, e.g. insulin, lysozyme, and bovine serum albumin (BSA). The comparison of sizes obtained by other techniques (e.g. dynamic light scattering and small-angle X-ray scattering) between bare and gold clusters containing proteins allows us to address the volume changes induced either by conformational changes (for BSA) or the formation of protein dimers (for insulin and lysozyme) during cluster formation and incorporation.

  4. Sizing protein-templated gold nanoclusters by time resolved fluorescence anisotropy decay measurements.

    Soleilhac, Antonin; Bertorelle, Franck; Antoine, Rodolphe

    2018-03-15

    Protein-templated gold nanoclusters (AuNCs) are very attractive due to their unique fluorescence properties. A major problem however may arise due to protein structure changes upon the nucleation of an AuNC within the protein for any future use as in vivo probes, for instance. In this work, we propose a simple and reliable fluorescence based technique measuring the hydrodynamic size of protein-templated gold nanoclusters. This technique uses the relation between the time resolved fluorescence anisotropy decay and the hydrodynamic volume, through the rotational correlation time. We determine the molecular size of protein-directed AuNCs, with protein templates of increasing sizes, e.g. insulin, lysozyme, and bovine serum albumin (BSA). The comparison of sizes obtained by other techniques (e.g. dynamic light scattering and small-angle X-ray scattering) between bare and gold clusters containing proteins allows us to address the volume changes induced either by conformational changes (for BSA) or the formation of protein dimers (for insulin and lysozyme) during cluster formation and incorporation. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. Use of a laser-induced fluorescence thermal imaging system for film cooling heat transfer measurement

    Chyu, M.K. [Carnegie Mellon Univ., Pittsburgh, PA (United States)

    1995-10-01

    This paper describes a novel approach based on fluorescence imaging of thermographic phosphor that enables the simultaneous determination of both local film effectiveness and local heat transfer on a film-cooled surface. The film cooling model demonstrated consists of a single row of three discrete holes on a flat plate. The transient temperature measurement relies on the temperature-sensitive fluorescent properties of europium-doped lanthanum oxysulfide (La{sub 2}O{sub 2}S:EU{sup 3+}) thermographic phosphor. A series of full-field surface temperatures, mainstream temperatures, and coolant film temperatures were acquired during the heating of a test surface. These temperatures are used to calculate the heat transfer coefficients and the film effectiveness simultaneously. Because of the superior spatial resolution capability for the heat transfer data reduced from these temperature frames, the laser-induced fluorescence (LIF) imaging system, the present study observes the detailed heat transfer characteristics over a film-protected surface. The trend of the results agrees with those obtained using other conventional thermal methods, as well as the liquid crystal imaging technique. One major advantage of this technique is the capability to record a large number of temperature frames over a given testing period. This offers multiple-sample consistency.

  6. High resolution measurements of solar induced chlorophyll fluorescence in the Fraunhofer oxigen bands

    Mazzoni, M.; Agati, G.; Cecchi, G.; Toci, G.; Mazzinghi, P.

    2017-11-01

    Spectra of solar radiance reflected by leaves close to the Fraunhofer bands show the net contribution of chlorophyll fluorescence emission which adds to the reflected solar spectra. In a laboratory experiment, a low stray light, high resolution, 0.85 m double monochromator was used to filter radiation living leaves still attached to the plant in correspondence of the 687 nm and 760 nm O2 absorption bands. Reference spectra from a non fluorescent white reference were also acquired. Acquisition was performed by a Microchannel plate (MCP) intensified diode array with 512 elements. A fit of the spectral data outside the absorption lines allowed to retrieve the spectral base-line as a function of wavelength for the reference panel and the leaf. Reflectance functions were determined extending the Plascyck equation system to all the resolved lines of the oxygen absorption bands and using the base-lines for the continuum values. Fluorescence was deduced from the same equation system, using both the measured leaf and reference radiance spectra and the leaf reflectance fitting function.

  7. Led induced chlorophyll fluorescence transient imager for measurements of health and stress status of whole plants

    Jalink, H.; Schoor, van der R.

    2011-01-01

    We have developed LED (light emitting diode) induced fluorescence transient imaging instrumentation to image the plant health/stress status by calculation of two images: Fv/Fm (variable fluorescence over saturation level of fluorescence) and the time response, tTR, of the fluorescence time curve.

  8. The orientation of eosin-5-maleimide on human erythrocyte band 3 measured by fluorescence polarization microscopy.

    Blackman, S M; Cobb, C E; Beth, A H; Piston, D W

    1996-01-01

    The dominant motional mode for membrane proteins is uniaxial rotational diffusion about the membrane normal axis, and investigations of their rotational dynamics can yield insight into both the oligomeric state of the protein and its interactions with other proteins such as the cytoskeleton. However, results from the spectroscopic methods used to study these dynamics are dependent on the orientation of the probe relative to the axis of motion. We have employed polarized fluorescence confocal microscopy to measure the orientation of eosin-5-maleimide covalently reacted with Lys-430 of human erythrocyte band 3. Steady-state polarized fluorescence images showed distinct intensity patterns, which were fit to an orientation distribution of the eosin absorption and emission dipoles relative to the membrane normal axis. This orientation was found to be unchanged by trypsin treatment, which cleaves band 3 between the integral membrane domain and the cytoskeleton-attached domain. this result suggests that phosphorescence anisotropy changes observed after trypsin treatment are due to a rotational constraint change rather than a reorientation of eosin. By coupling time-resolved prompt fluorescence anisotropy with confocal microscopy, we calculated the expected amplitudes of the e-Dt and e-4Dt terms from the uniaxial rotational diffusion model and found that the e-4Dt term should dominate the anisotropy decay. Delayed fluorescence and phosphorescence anisotropy decays of control and trypsin-treated band 3 in ghosts, analyzed as multiple uniaxially rotating populations using the amplitudes predicted by confocal microscopy, were consistent with three motional species with uniaxial correlation times ranging from 7 microseconds to 1.4 ms. Images FIGURE 4 FIGURE 8 FIGURE 9 PMID:8804603

  9. Measurement of the spectrum of electric-field fluctuations in a plasma by laser-fluorescence spectroscopy

    Hildebrandt, J.; Kunze, H.

    1980-01-01

    Laser-fluorescence spectroscopy has been applied to measure the spectrum of electric wave fields with high temporal resolution in a pulsed hollow-cathode discharge. A low-frequency and a high-frequency component can be identified

  10. Sun-induced chlorophyll fluorescence, photosynthesis, and light use efficiency of a soybean field from seasonally continuous measurements

    Recent development of sun-induced chlorophyll fluorescence (SIF) technology is stimulating studies to remotely approximate canopy photosynthesis (measured as gross primary production, GPP). While multiple applications have advanced the empirical relationship between GPP and SIF, mechanistic understa...

  11. Measurement of buried undercut structures in microfluidic devices by laser fluorescent confocal microscopy

    Li Shiguang; Liu Jing; Nguyen, Nam-Trung; Fang Zhongping; Yoon, Soon Fatt

    2009-01-01

    Measuring buried, undercut microstructures is a challenging task in metrology. These structures are usually characterized by measuring their cross sections after physically cutting the samples. This method is destructive and the obtained information is incomplete. The distortion due to cutting also affects the measurement accuracy. In this paper, we first apply the laser fluorescent confocal microscopy and intensity differentiation algorithm to obtain the complete three-dimensional profile of the buried, undercut structures in microfluidic devices, which are made by the soft lithography technique and bonded by the oxygen plasma method. The impact of material wettability and the refractive index (n) mismatch among the liquid, samples, cover layer, and objective on the measurement accuracy are experimentally investigated.

  12. The use of Fluorescence Resonance Energy Transfer (FRET peptidesfor measurement of clinically important proteolytic enzymes

    Adriana K. Carmona

    2009-09-01

    Full Text Available Proteolytic enzymes have a fundamental role in many biological processes and are associated with multiple pathological conditions. Therefore, targeting these enzymes may be important for a better understanding of their function and development of therapeutic inhibitors. Fluorescence Resonance Energy Transfer (FRET peptides are convenient tools for the study of peptidases specificity as they allow monitoring of the reaction on a continuous basis, providing a rapid method for the determination of enzymatic activity. Hydrolysis of a peptide bond between the donor/acceptor pair generates fluorescence that permits the measurement of the activity of nanomolar concentrations of the enzyme. The assays can be performed directly in a cuvette of the fluorimeter or adapted for determinations in a 96-well fluorescence plate reader. The synthesis of FRET peptides containing ortho-aminobenzoic acid (Abz as fluorescent group and 2, 4-dinitrophenyl (Dnp or N-(2, 4-dinitrophenylethylenediamine (EDDnp as quencher was optimized by our group and became an important line of research at the Department of Biophysics of the Federal University of São Paulo. Recently, Abz/Dnp FRET peptide libraries were developed allowing high-throughput screening of peptidases substrate specificity. This review presents the consolidation of our research activities undertaken between 1993 and 2008 on the synthesis of peptides and study of peptidases specificities.As enzimas proteolíticas têm um papel fundamental em muitos processos biológicos e estão associadas a vários estados patológicos. Por isso, o estudo da especificidade das peptidases pode ser importante para uma melhor compreensão da função destas enzimas e para o desenvolvimento de inibidores. Os substratos com supressão intramolecular de fluorescência constituem uma excelente ferramenta, pois permitem o monitoramento da reação de forma contínua, proporcionando um método prático e rápido para a determinação da

  13. Measuring of the Chlorophyll a Fluorescence in Calcium Alginate-Encapsulated Algae

    Ibeth Paola Delgadillo Rodríguez

    2017-05-01

    Full Text Available Immobilization of algae has many applications, such as water bioremediation and production of metabolites. One of the variables that can be determined in the immobilized algae is chlorophyll a fluorescence, because this parameter is related to the physiological response of these organisms. Therefore, the objective of this study was to explore a method for measuring the chlorophyll a fluorescence in calcium alginate-encapsulated algae. To do this, two species of microalgae (Scenedesmus ovalternus LAUN 001 and Parachlorella kessleri LAUN 002 were grown in monocultures in both free culture conditions (10 mL of algae preparation in 250 mL of Basal Bold Medium and encapsulated (250 spheres in 250 mL of Basal Bold Medium. Different measurement protocols of chlorophyll a fluorescence of photosystem II (PSII were performed by varying a the preadaptation time to darkness (10, 15 and 30 min, b the light intensity of the non-modulated fluorometer (between 1000 and 3500 μmoles m-2s-1, and c the time of exposure to actinic light (1, 2 and 5 s. The optimal conditions for the measurement of the maximum quantum yield of PSII (Fv/Fm in encapsulated algae were established as follow: a 30 min of preadaptation time; b 3000 μmoles m-2s-1 of the fluorometer light intensity; and c 1 to 2 s of exposure to actinic light. The following values in the photochemical activity of algae in non-stressful conditions were found: 0.760 – 0.764 for S. ovalternus, and 0.732 – 0.748 for P. kessleri. This methodology allows to observe some changes in the photochemical activity related with variations in the factors under which are the immobilized algae.

  14. Measurement of pH micro-heterogeneity in natural cheese matrices by fluorescence lifetime imaging

    Zuzana eBurdikova

    2015-03-01

    Full Text Available Cheese, a product of microbial fermentation may be defined as a protein matrix entrapping fat, moisture, minerals and solutes as well as dispersed bacterial colonies. The growth and physiology of bacterial cells in these colonies may be influenced by the microenvironment around the colony, or alternatively the cells within the colony may modify the microenvironment (e.g. pH, redox potential due to their metabolic activity. While cheese pH may be measured at macro level there remains a significant knowledge gap relating to the degree of micro-heterogeneity of pH within the cheese matrix and its relationship with microbial, enzymatic and physiochemical parameters and ultimately with cheese quality, consistency and ripening patterns. The pH of cheese samples was monitored both at macroscopic scale and at microscopic scale, using a non-destructive microscopic technique employing C-SNARF-4 and Oregon Green 488 fluorescent probes. The objectives of this work were to evaluate the suitability of these dyes for microscale pH measurements in natural cheese matrices and to enhance the sensitivity and extend the useful pH range of these probes using fluorescence lifetime imaging (FLIM. In particular, fluorescence lifetime of Oregon Green 488 proved to be sensitive probe to map pH micro heterogeneity within cheese matrices. Good agreement was observed between macroscopic scale pH measurement by FLIM and by traditional pH methods, but in addition considerable localized microheterogeneity in pH was evident within the curd matrix with pH range between 4.0 and 5.5. This technique provides significant potential to further investigate the relationship between cheese matrix physico-chemistry and bacterial metabolism during cheese manufacture and ripening.

  15. Measurement of pH micro-heterogeneity in natural cheese matrices by fluorescence lifetime imaging.

    Burdikova, Zuzana; Svindrych, Zdenek; Pala, Jan; Hickey, Cian D; Wilkinson, Martin G; Panek, Jiri; Auty, Mark A E; Periasamy, Ammasi; Sheehan, Jeremiah J

    2015-01-01

    Cheese, a product of microbial fermentation may be defined as a protein matrix entrapping fat, moisture, minerals and solutes as well as dispersed bacterial colonies. The growth and physiology of bacterial cells in these colonies may be influenced by the microenvironment around the colony, or alternatively the cells within the colony may modify the microenvironment (e.g., pH, redox potential) due to their metabolic activity. While cheese pH may be measured at macro level there remains a significant knowledge gap relating to the degree of micro-heterogeneity of pH within the cheese matrix and its relationship with microbial, enzymatic and physiochemical parameters and ultimately with cheese quality, consistency and ripening patterns. The pH of cheese samples was monitored both at macroscopic scale and at microscopic scale, using a non-destructive microscopic technique employing C-SNARF-4 and Oregon Green 488 fluorescent probes. The objectives of this work were to evaluate the suitability of these dyes for microscale pH measurements in natural cheese matrices and to enhance the sensitivity and extend the useful pH range of these probes using fluorescence lifetime imaging (FLIM). In particular, fluorescence lifetime of Oregon Green 488 proved to be sensitive probe to map pH micro heterogeneity within cheese matrices. Good agreement was observed between macroscopic scale pH measurement by FLIM and by traditional pH methods, but in addition considerable localized microheterogeneity in pH was evident within the curd matrix with pH range between 4.0 and 5.5. This technique provides significant potential to further investigate the relationship between cheese matrix physico-chemistry and bacterial metabolism during cheese manufacture and ripening.

  16. Measurement of changes in nuclear charge radii of 2r by laser-induced resonance fluorescence

    Gangrskij, Yu.P.; Zemlyanoj, S.G.; Marinova, K.P.; Markov, B.N.; Khoang Tkhi Kim Khueh; Chan Kong Tam; Kul'dzhanov, B.K.

    1987-01-01

    The optical isotopic shifts of Zr stable isotopes have been measured in three atomic transitions of type 4d 2 5s 2 → 4d 2 5s5p using the technique of laser-induced resonance fluorescence. The changes of nuclear mean-square charge radius Δ 2 > have been determined. The extracted values of Δ 2 > are compared to predictions of the droplet model. It is shown that the droplet model calculations can be made to agree with the experimental results, if changes of nuclear dynamical octupole deformation and of surface diffuseness parameter are taken into account

  17. Neuronal Depolarization Drives Increased Dopamine Synaptic Vesicle Loading via VGLUT.

    Aguilar, Jenny I; Dunn, Matthew; Mingote, Susana; Karam, Caline S; Farino, Zachary J; Sonders, Mark S; Choi, Se Joon; Grygoruk, Anna; Zhang, Yuchao; Cela, Carolina; Choi, Ben Jiwon; Flores, Jorge; Freyberg, Robin J; McCabe, Brian D; Mosharov, Eugene V; Krantz, David E; Javitch, Jonathan A; Sulzer, David; Sames, Dalibor; Rayport, Stephen; Freyberg, Zachary

    2017-08-30

    The ability of presynaptic dopamine terminals to tune neurotransmitter release to meet the demands of neuronal activity is critical to neurotransmission. Although vesicle content has been assumed to be static, in vitro data increasingly suggest that cell activity modulates vesicle content. Here, we use a coordinated genetic, pharmacological, and imaging approach in Drosophila to study the presynaptic machinery responsible for these vesicular processes in vivo. We show that cell depolarization increases synaptic vesicle dopamine content prior to release via vesicular hyperacidification. This depolarization-induced hyperacidification is mediated by the vesicular glutamate transporter (VGLUT). Remarkably, both depolarization-induced dopamine vesicle hyperacidification and its dependence on VGLUT2 are seen in ventral midbrain dopamine neurons in the mouse. Together, these data suggest that in response to depolarization, dopamine vesicles utilize a cascade of vesicular transporters to dynamically increase the vesicular pH gradient, thereby increasing dopamine vesicle content. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. Development of a 2D temperature measurement technique for combustion diagnostics using 2-line atomic fluorescence

    Engstroem, Johan

    2001-01-01

    The present thesis is concerned with the development and application of a novel planar laser-induced fluorescence (PLIF) technique for temperature measurements in a variety of combusting flows. Accurate measurement of temperature is an essential task in combustion diagnostics, since temperature is one of the most fundamental quantities for the characterization of combustion processes. The technique is based on two-line atomic fluorescence (TLAF) from small quantities of atomic indium (In) seeded into the fuel. It has been developed from small-scale experiments in laboratory flames to the point where practical combustion systems can be studied. The technique is conceptually simple and reveals temperature information in the post-flame regions. The viability of the technique has been tested in three extreme measurement situations: in spark ignition engine combustion, in ultra-lean combustion situations such as lean burning aero-engine concepts and, finally, in fuel-rich combustion. TLAF was successfully applied in an optical Sl engine using isooctane as fuel. The wide temperature sensitivity, 700 - 3000 K, of the technique using indium atoms allowed measurements over the entire combustion cycle in the engine to be performed. In applications in lean combustion a potential problem caused by the strong oxidation processes of indium atoms was encountered. This limits measurement times due to deposits of absorbing indium oxide on measurement windows. The seeding requirement is a disadvantage of the technique and can be a limitation in some applications. The results from experiments performed in sooting flames are very promising for thermometry measurements in such environments. Absorption by hydrocarbons and other native species was found to be negligible. Since low laser energies and low seeding concentrations could be used, the technique did not, unlike most other incoherent optical thermometry techniques, suffer interferences from LII of soot particles or LIF from PAH

  19. Possible Depolarization Mechanism due to Low Beta Squeeze

    Ranjbar, V.; Luccio, A.; Bai, M.

    2008-01-01

    Simulations reveal a potential depolarization mechanism during low beta squeeze. This depolarization appears to be driven by a spin tune modulation caused by spin precession through the strong low beta quads due to the vertical fields. The modulation of the spin tune introduces an additional snake resonance condition at ν s0 ± nν x - ν z l = integer which while the same numerology as the well known sextupole resonance, can operate in the absence of sextupole elements

  20. Measurements of a potential interference with laser-induced fluorescence measurements of ambient OH from the ozonolysis of biogenic alkenes

    Rickly, Pamela; Stevens, Philip S.

    2018-01-01

    Reactions of the hydroxyl radical (OH) play a central role in the chemistry of the atmosphere, and measurements of its concentration can provide a rigorous test of our understanding of atmospheric oxidation. Several recent studies have shown large discrepancies between measured and modeled OH concentrations in forested areas impacted by emissions of biogenic volatile organic compounds (BVOCs), where modeled concentrations were significantly lower than measurements. A potential reason for some of these discrepancies involves interferences associated with the measurement of OH using the laser-induced fluorescence-fluorescence assay by gas expansion (LIF-FAGE) technique in these environments. In this study, a turbulent flow reactor operating at atmospheric pressure was coupled to a LIF-FAGE cell and the OH signal produced from the ozonolysis of α-pinene, β-pinene, ocimene, isoprene, and 2-methyl-3-buten-2-ol (MBO) was measured. To distinguish between OH produced from the ozonolysis reactions and any OH artifact produced inside the LIF-FAGE cell, an external chemical scrubbing technique was used, allowing for the direct measurement of any interference. An interference under high ozone (between 2 × 1013 and 10 × 1013 cm-3) and BVOC concentrations (between approximately 0.1 × 1012 and 40 × 1012 cm-3) was observed that was not laser generated and was independent of the ozonolysis reaction time. For the ozonolysis of α- and β-pinene, the observed interference accounted for approximately 40 % of the total OH signal, while for the ozonolysis of ocimene the observed interference accounted for approximately 70 % of the total OH signal. Addition of acetic acid to the reactor eliminated the interference, suggesting that the source of the interference in these experiments involved the decomposition of stabilized Criegee intermediates (SCIs) inside the FAGE detection cell. Extrapolation of these measurements to ambient concentrations suggests that these interferences

  1. Automated sorting of polymer flakes: fluorescence labeling and development of a measurement system prototype.

    Brunner, S; Fomin, P; Kargel, Ch

    2015-04-01

    The extensive demand and use of plastics in modern life is associated with a significant economical impact and a serious ecological footprint. The production of plastics involves a high energy consumption and CO2 emission as well as the large need for (limited) fossil resources. Due to the high durability of plastics, large amounts of plastic garbage is mounting in overflowing landfills (plus 9.6 million tons in Europe in the year 2012) and plastic debris is floating in the world oceans or waste-to-energy combustion releases even more CO2 plus toxic substances (dioxins, heavy metals) to the atmosphere. The recycling of plastic products after their life cycle can obviously contribute a great deal to the reduction of the environmental and economical impacts. In order to produce high-quality recycling products, mono-fractional compositions of waste polymers are required. However, existing measurement technologies such as near infrared spectroscopy show limitations in the sorting of complex mixtures and different grades of polymers, especially when black plastics are involved. More recently invented technologies based on mid-infrared, Raman spectroscopy or laser-aided spectroscopy are still under development and expected to be rather expensive. A promising approach to put high sorting purities into practice is to label plastic resins with unique combinations of fluorescence markers (tracers). These are incorporated into virgin resins during the manufacturing process at the ppm (or sub ppm) concentration level, just large enough that the fluorescence emissions can be detected with sensitive instrumentation but neither affect the visual appearance nor the mechanical properties of the polymers. In this paper we present the prototype of a measurement and classification system that identifies polymer flakes (mill material of a few millimeters size) located on a conveyor belt in real time based on the emitted fluorescence of incorporated markers. Classification performance

  2. Efficacy of reduced doses of bentazone assessed by instruments based on measurement of chlorophyll fluorescence

    Vojtěch Kocurek

    2011-01-01

    Full Text Available Chlorophyll fluorescence is a type of radiation emitted by plants as unused part of energy absorbed from sunlight. Its intensity depends on many stress factors, nutrition, weather conditions etc. Methods based on chlorophyll fluorescence measurement have potential to be perspective for the assessment of herbicide efficacy, phytotoxicity or stress influence. Two fluorometers (FluorCam and handy FluorPen were used for measurements in laboratory experiments in 2007–2009. Herbicide Basagran super with active ingredient bentazone (480 g.l−1 was tested using a parameter called ‚Quantum yield of fluorescence‘ (QY in three different doses: the registered dose 2.0 l.ha−1 (100% and lower doses 1.5 l.ha−1 (75% and 1.0 l.ha−1 (50%. Treated experimental plants of redroot pigweed (Amaranthus retroflexus L. were measured in 0, 1, 2, 3, 6, 9 and 15 days after treatment and the results were compared with subjective assessment (estimation and growth parameters. The obtained results showed that the effect of bentazone measured by both devices was statistically significantly different from untreated control. We can also detect herbicide effect earlier by QY measurement than by other methods. Different doses showed significant differences 15 days after treatment for dose 2.0 l.ha−1 in comparison with both reduced doses. The subjective assessment showed significant differences in all terms of measurement (1–15 days after application except of the day of application. Regeneration of plants for which the youngest leaves were not treated by herbicide was observed for all doses. Difference of QY values between used devices was on average 0.119 (higher for FluorCam but statistically insignificant.

  3. L-shell x-ray fluorescence measurements of lead in bone: accuracy and precision

    Todd, Andrew C.; Carroll, Spencer; Khan, Fuad A.; Moshier, Erin L.; Geraghty, Ciaran; Tang, Shida; Parsons, Patrick J.

    2002-01-01

    This study aimed to quantify the accuracy and precision of a method for in vivo measurements of lead in bone using L-shell x-ray fluorescence (LXRF), the former via comparison with independent measurements of lead in bone obtained using electrothermal atomic absorption spectrometry (AAS) following acid digestion. Using LXRF, the lead content of adult human cadaver tibiae was measured, both as intact legs and as dissected tibiae with overlying tissue removed, the latter at several proximal-distal locations. After LXRF, each tibia was divided into nine cross-sectional segments, which were further separated into tibia core and surface samples for AAS measurement. The proximal-distal variability of AAS-measured core and surface tibia lead concentrations has been described elsewhere (the lead concentration was found to decrease towards both ends of the tibia). The subjects of this paper are the proximal-distal variability of the LXRF-measured lead concentrations, the measurement uncertainty and the statistical agreement between LXRF and AAS. There was no clear proximal-distal variability in the LXRF-measured concentrations; the degree of variability in actual tibia lead concentrations is far less than the LXRF measurement uncertainty. Measurement uncertainty was dominated by counting statistics and exceeded the estimate of lead concentration in most cases. The agreement between LXRF and AAS was reasonably good for bare bone measurements but poor for intact leg measurements. The variability of the LXRF measurements was large enough, for both bare bone and intact leg measurements, to yield grave concerns about the analytical use of the technique in vivo. (author)

  4. Chromosome translocations measured by fluorescence in-situ hybridization: A promising biomarker

    Lucas, J.N.; Straume, T.

    1995-10-01

    A biomarker for exposure and risk assessment would be most useful if it employs an endpoint that is highly quantitative, is stable with time, and is relevant to human risk. Recent advances in chromosome staining using fluorescence in situ hybridization (FISH) facilitate fast and reliable measurement of reciprocal translocations, a kind of DNA damage linked to both prior exposure and risk. In contrast to other biomarkers available, the frequency of reciprocal translocations in individuals exposed to whole-body radiation is stable with time post exposure, has a rather small inter-individual variability, and can be measured accurately at the low levels. Here, the authors discuss results from their studies demonstrating that chromosome painting can be used to reconstruct radiation dose for workers exposed within the dose limits, for individuals exposed a long time ago, and even for those who have been diagnosed with leukemia but not yet undergone therapy

  5. Review of laser-induced fluorescence methods for measuring rf- and microwave electric fields in discharges

    Gavrilenko, V.; Oks, E.

    1994-01-01

    Development of methods for measuring rf- or μ-wave electric fields E(t) = E 0 cosωt in discharge plasmas is of a great practical importance. First, these are fields used for producing rf- or μ-wave discharges. Second, the fields E(t) may represent electromagnetic waves penetrating into a plasma from the outside. This paper reviews methods for diagnostics of the fields E(t) in low temperature plasmas based on Laser-Induced Fluorescence (LIF). Compared to emission (passive) methods, LIF-methods have a higher sensitivity as well as higher spatial and temporal resolutions. Underlying physical effects may be highlighted by an example of LIF of hydrogen atoms in a plasma. After a presentation of the underlying physical principles, the review focuses on key experiments where these principles were implemented for measurements of rf- and μ-wave electric fields in various discharges

  6. Parallel ion flow velocity measurement using laser induced fluorescence method in an electron cyclotron resonance plasma

    Yoshimura, Shinji; Okamoto, Atsushi; Terasaka, Kenichiro; Ogiwara, Kohei; Tanaka, Masayoshi Y.; Aramaki, Mitsutoshi

    2010-01-01

    Parallel ion flow velocity along a magnetic field has been measured using a laser induced fluorescence (LIF) method in an electron cyclotron resonance (ECR) argon plasma with a weakly-diverging magnetic field. To measure parallel flow velocity in a cylindrical plasma using the LIF method, the laser beam should be injected along device axis; however, the reflection of the incident beam causes interference between the LIF emission of the incident and reflected beams. Here we present a method of quasi-parallel laser injection at a small angle, which utilizes the reflected beam as well as the incident beam to obtain the parallel ion flow velocity. Using this method, we observed an increase in parallel ion flow velocity along the magnetic field. The acceleration mechanism is briefly discussed on the basis of the ion fluid model. (author)

  7. Depolarization Ratio Profiles Calibration and Observations of Aerosol and Cloud in the Tibetan Plateau Based on Polarization Raman Lidar

    Guangyao Dai

    2018-03-01

    Full Text Available A brief description of the Water vapor, Cloud and Aerosol Lidar (WACAL system is provided. To calibrate the volume linear depolarization ratio, the concept of “ Δ 90 ° -calibration” is applied in this study. This effective and accurate calibration method is adjusted according to the design of WACAL. Error calculations and analysis of the gain ratio, calibrated volume linear depolarization ratio and particle linear depolarization ratio are provided as well. In this method, the influences of the gain ratio, the rotation angle of the plane of polarization and the polarizing beam splitter are discussed in depth. Two groups of measurements with half wave plate (HWP at angles of (0 ° , 45 ° and (22.5 ° , −22.5 ° are operated to calibrate the volume linear depolarization ratio. Then, the particle linear depolarization ratios measured by WACAL and CALIOP (the Cloud-Aerosol Lidar with Orthogonal Polarization during the simultaneous observations were compared. Good agreements are found. The calibration method was applied in the third Tibetan Plateau Experiment of Atmospheric Sciences (TIPEX III in 2013 and 2014 in China. Vertical profiles of the particle depolarization ratio of clouds and aerosol in the Tibetan Plateau were measured with WACAL in Litang (30.03° N, 100.28° E, 3949 m above sea level (a.s.l. in 2013 and Naqu (31.48° N, 92.06° E, 4508 m a.s.l. in 2014. Then an analysis on the polarizing properties of the aerosol, clouds and cirrus over the Tibetan Plateau is provided. The particle depolarization ratio of cirrus clouds varies from 0.36 to 0.52, with a mean value of 0.44 ± 0.04. Cirrus clouds occurred between 5.2 and 12 km above ground level (a.g.l.. The cloud thickness ranges from 0.12 to 2.55 km with a mean thickness of 1.22 ± 0.70 km. It is found that the particle depolarization ratio of cirrus clouds become larger as the height increases. However, the increase rate of the particle depolarization ratio becomes smaller as

  8. On the nature of the fast depolarization of muons in condensed nitrogen

    Duginov, V.N.; Grebinnik, V.G.; Kirillov, B.F.

    1990-01-01

    Temperature dependences of the depolarization rate, the muon precession initial amplitude and phase in liquid and crystalline nitrogen with the oxygen content of 10 -6 have been measured. It has been shown that muon spin relaxation parameters in nitrogen do not change at the reduction of the oxygen impurity content from 0.7x10 -4 to 10 -6 . The fast depolarization of muons in condensed nitrogen is apparently due to the formation of muonium atoms. The muon precession initial phase has been measured as a function of the perpendicular magnetic field to determine the state of short-lived muonium in nitrogen. It has been determined that muonium in nitrogen is in an excited state. 14 refs.; 3 figs

  9. Neutron depolarization study of internal stresses in amorphous Fe40Ni40B20

    de Jong, M.; Sietsma, J.; Rekveldt, M.T.; van den Beukel, A.

    1997-01-01

    The magnetic domain structure of amorphous ferromagnets with nonzero magnetostriction is mainly determined by the internal stress state because of the magneto-elastic coupling. The stress and field dependence of the domain structure contains important information on the internal stresses in the material. The three-dimensional neutron depolarization technique has been used to study the stress- and field-dependence of the bulk domain structures in both as-quenched and annealed ribbons of the metallic glass Fe 40 Ni 40 B 20 . A three-layer domain structure model corresponding to compressive and tensile internal stresses is presented to explain the measured data. The influence of surface roughness on the interpretation of neutron depolarization measurements in amorphous ribbons is discussed. Finally, the internal stress relaxation due to the annealing is explained in terms of the viscous behaviour of the glass. copyright 1997 American Institute of Physics

  10. Use of fluorescence spectroscopy to measure molecular autofluorescence in diabetic subjects

    Gomes, Cinthia Zanini

    2011-01-01

    Diabetes Mellitus (DM) comprises a complex metabolic syndrome, caused by reduced or absent secretion of insulin by pancreatic beta cells, leading to hyperglycemia. Hyperglycemia promotes glycation of proteins and, consequently, the appearance of advanced glycation end products (AGEs). Currently, diabetic patients are monitored by determining levels of glucose and glycated hemoglobin (HbA1c). The complications caused by hyperglycemia may be divided into micro and macrovascular complications, represented by retinopathy, nephropathy, neuropathy and cardiovascular disease. Albumin (HSA) is the most abundant serum protein in the human body and is subject to glycation. The Protoporphyrin IX (PpIX) is the precursor molecule of heme synthesis, structural component of hemoglobin. The in vitro and animals studies have indicated that hyperglycemia promotes a decrease in its concentration in erythrocytes. The fluorescence spectroscopy is a technique widely used in biomedical field. The autofluorescence corresponds to the intrinsic fluorescence present in some molecules, this being associated with the same structure. The aim of this study was to use fluorescence spectroscopy to measure levels of erythrocyte PpIX autofluorescence and AGE-HSA in diabetic and healthy subjects and compare them with levels of blood glucose and HbA1c. This study was conducted with 151 subjects (58 controls and 93 diabetics). Epidemiological data of patients and controls were obtained from medical records. For control subjects, blood glucose levels were obtained from medical records and levels of Hb1Ac obtained by using commercial kits. The determination of the PpIX autofluorescence was performed with excitation at 405 nm and emission at 632 nm. Determination of AGE-HSA was performed with excitation at 370 nm and emission at 455 nm. Approximately 50% of diabetic had micro and macrovascular lesions resulting from hyperglycemia. There were no significant differences in the PpIX emission intensity values

  11. Meaningful interpretation of subdiffusive measurements in living cells (crowded environment) by fluorescence fluctuation microscopy.

    Baumann, Gerd; Place, Robert F; Földes-Papp, Zeno

    2010-08-01

    In living cell or its nucleus, the motions of molecules are complicated due to the large crowding and expected heterogeneity of the intracellular environment. Randomness in cellular systems can be either spatial (anomalous) or temporal (heterogeneous). In order to separate both processes, we introduce anomalous random walks on fractals that represented crowded environments. We report the use of numerical simulation and experimental data of single-molecule detection by fluorescence fluctuation microscopy for detecting resolution limits of different mobile fractions in crowded environment of living cells. We simulate the time scale behavior of diffusion times tau(D)(tau) for one component, e.g. the fast mobile fraction, and a second component, e.g. the slow mobile fraction. The less the anomalous exponent alpha the higher the geometric crowding of the underlying structure of motion that is quantified by the ratio of the Hausdorff dimension and the walk exponent d(f)/d(w) and specific for the type of crowding generator used. The simulated diffusion time decreases for smaller values of alpha # 1 but increases for a larger time scale tau at a given value of alpha # 1. The effect of translational anomalous motion is substantially greater if alpha differs much from 1. An alpha value close to 1 contributes little to the time dependence of subdiffusive motions. Thus, quantitative determination of molecular weights from measured diffusion times and apparent diffusion coefficients, respectively, in temporal auto- and crosscorrelation analyses and from time-dependent fluorescence imaging data are difficult to interpret and biased in crowded environments of living cells and their cellular compartments; anomalous dynamics on different time scales tau must be coupled with the quantitative analysis of how experimental parameters change with predictions from simulated subdiffusive dynamics of molecular motions and mechanistic models. We first demonstrate that the crowding exponent

  12. Development of an X-ray fluorescence holographic measurement system for protein crystals

    Sato-Tomita, Ayana, E-mail: ayana.sato@jichi.ac.jp, E-mail: shibayam@jichi.ac.jp, E-mail: hayashi.koichi@nitech.ac.jp; Shibayama, Naoya, E-mail: ayana.sato@jichi.ac.jp, E-mail: shibayam@jichi.ac.jp, E-mail: hayashi.koichi@nitech.ac.jp; Okabe, Takahiro [Division of Biophysics, Department of Physiology, Jichi Medical University, Yakushiji, Shimotsuke 329-0498 (Japan); Happo, Naohisa [Department of Computer and Network Engineering, Graduate School of Information Sciences, Hiroshima City University, Asa-Minami-Ku, Hiroshima 731-3194 (Japan); Kimura, Koji [Department of Physical Science and Engineering, Nagoya Institute of Technology, Gokiso, Showa, Nagoya 466-8555 (Japan); Matsushita, Tomohiro [Japan Synchrotron Radiation Research Institute (JASRI), SPring-8, Sayo, Hyogo 679-5198 (Japan); Park, Sam-Yong [Drug Design Laboratory, Department of Medical Life Science, Yokohama City University, Suehiro, Tsurumi, Yokohama 230-0045 (Japan); Sasaki, Yuji C. [Department of Advanced Material Science, Graduate School of Frontier Science, The University of Tokyo, Kashiwanoha, Kashiwa 277-8561 (Japan); Hayashi, Kouichi, E-mail: ayana.sato@jichi.ac.jp, E-mail: shibayam@jichi.ac.jp, E-mail: hayashi.koichi@nitech.ac.jp [Department of Physical Science and Engineering, Nagoya Institute of Technology, Gokiso, Showa, Nagoya 466-8555 (Japan); Frontier Research Institute for Materials Science, Nagoya Institute of Technology, Gokiso, Showa, Nagoya 466-8555 (Japan)

    2016-06-15

    Experimental procedure and setup for obtaining X-ray fluorescence hologram of crystalline metalloprotein samples are described. Human hemoglobin, an α{sub 2}β{sub 2} tetrameric metalloprotein containing the Fe(II) heme active-site in each chain, was chosen for this study because of its wealth of crystallographic data. A cold gas flow system was introduced to reduce X-ray radiation damage of protein crystals that are usually fragile and susceptible to damage. A χ-stage was installed to rotate the sample while avoiding intersection between the X-ray beam and the sample loop or holder, which is needed for supporting fragile protein crystals. Huge hemoglobin crystals (with a maximum size of 8 × 6 × 3 mm{sup 3}) were prepared and used to keep the footprint of the incident X-ray beam smaller than the sample size during the entire course of the measurement with the incident angle of 0°-70°. Under these experimental and data acquisition conditions, we achieved the first observation of the X-ray fluorescence hologram pattern from the protein crystals with minimal radiation damage, opening up a new and potential method for investigating the stereochemistry of the metal active-sites in biomacromolecules.

  13. Fluorescence lifetime measurements of native and glycated human serum albumin and bovine serum albumin

    Joshi, Narahari V.; Joshi, Virgina O. d.; Contreras, Silvia; Gil, Herminia; Medina, Honorio; Siemiarczuk, Aleksander

    1999-05-01

    Nonenzymatic glycation, also known as Maillard reaction, plays an important role in the secondary complications of the diabetic pathology and aging, therefore, human serum albumin (HSA) and bovine serum albumin (BSA) were glycated by a conventional method in our laboratory using glucose as the glycating agent. Fluorescence lifetime measurements were carried out with a laser strobe fluorometer equipped with a nitrogen/dye laser and a frequency doubler as a pulsed excitation source. The samples were excited at 295 nm and the emission spectra were recorded at 345 nm. The obtained decay curves were tried for double and triple exponential functions. It has been found that the shorter lifetime increases for glycated proteins as compared with that of the native ones. For example, in the case of glycated BSA the lifetime increased from 1.36 ns to 2.30 ns. Similarly, for HSA, the lifetime increases from 1.58 ns to 2.26 ns. Meanwhile, the longer lifetime changed very slightly for both proteins (from 6.52 ns to 6.72 ns). The increase in the lifetime can be associated with the environmental effect; originated from the attachment of glucose to some lysine residues. A good example is Trp 214 which is in the cage of Lys 225, Lys 212, Lys 233, Lys 205, Lys 500, Lys 199 and Lys 195. If fluorescence lifetime technique is calibrated and properly used it could be employed for assessing glycation of proteins.

  14. Development of an X-ray fluorescence holographic measurement system for protein crystals

    Sato-Tomita, Ayana; Shibayama, Naoya; Okabe, Takahiro; Happo, Naohisa; Kimura, Koji; Matsushita, Tomohiro; Park, Sam-Yong; Sasaki, Yuji C.; Hayashi, Kouichi

    2016-01-01

    Experimental procedure and setup for obtaining X-ray fluorescence hologram of crystalline metalloprotein samples are described. Human hemoglobin, an α_2β_2 tetrameric metalloprotein containing the Fe(II) heme active-site in each chain, was chosen for this study because of its wealth of crystallographic data. A cold gas flow system was introduced to reduce X-ray radiation damage of protein crystals that are usually fragile and susceptible to damage. A χ-stage was installed to rotate the sample while avoiding intersection between the X-ray beam and the sample loop or holder, which is needed for supporting fragile protein crystals. Huge hemoglobin crystals (with a maximum size of 8 × 6 × 3 mm"3) were prepared and used to keep the footprint of the incident X-ray beam smaller than the sample size during the entire course of the measurement with the incident angle of 0°-70°. Under these experimental and data acquisition conditions, we achieved the first observation of the X-ray fluorescence hologram pattern from the protein crystals with minimal radiation damage, opening up a new and potential method for investigating the stereochemistry of the metal active-sites in biomacromolecules.

  15. Micro-Droplet Detection Method for Measuring the Concentration of Alkaline Phosphatase-Labeled Nanoparticles in Fluorescence Microscopy

    Rufeng Li

    2017-11-01

    Full Text Available This paper developed and evaluated a quantitative image analysis method to measure the concentration of the nanoparticles on which alkaline phosphatase (AP was immobilized. These AP-labeled nanoparticles are widely used as signal markers for tagging biomolecules at nanometer and sub-nanometer scales. The AP-labeled nanoparticle concentration measurement can then be directly used to quantitatively analyze the biomolecular concentration. Micro-droplets are mono-dispersed micro-reactors that can be used to encapsulate and detect AP-labeled nanoparticles. Micro-droplets include both empty micro-droplets and fluorescent micro-droplets, while fluorescent micro-droplets are generated from the fluorescence reaction between the APs adhering to a single nanoparticle and corresponding fluorogenic substrates within droplets. By detecting micro-droplets and calculating the proportion of fluorescent micro-droplets to the overall micro-droplets, we can calculate the AP-labeled nanoparticle concentration. The proposed micro-droplet detection method includes the following steps: (1 Gaussian filtering to remove the noise of overall fluorescent targets, (2 a contrast-limited, adaptive histogram equalization processing to enhance the contrast of weakly luminescent micro-droplets, (3 an red maximizing inter-class variance thresholding method (OTSU to segment the enhanced image for getting the binary map of the overall micro-droplets, (4 a circular Hough transform (CHT method to detect overall micro-droplets and (5 an intensity-mean-based thresholding segmentation method to extract the fluorescent micro-droplets. The experimental results of fluorescent micro-droplet images show that the average accuracy of our micro-droplet detection method is 0.9586; the average true positive rate is 0.9502; and the average false positive rate is 0.0073. The detection method can be successfully applied to measure AP-labeled nanoparticle concentration in fluorescence microscopy.

  16. Micro-Droplet Detection Method for Measuring the Concentration of Alkaline Phosphatase-Labeled Nanoparticles in Fluorescence Microscopy.

    Li, Rufeng; Wang, Yibei; Xu, Hong; Fei, Baowei; Qin, Binjie

    2017-11-21

    This paper developed and evaluated a quantitative image analysis method to measure the concentration of the nanoparticles on which alkaline phosphatase (AP) was immobilized. These AP-labeled nanoparticles are widely used as signal markers for tagging biomolecules at nanometer and sub-nanometer scales. The AP-labeled nanoparticle concentration measurement can then be directly used to quantitatively analyze the biomolecular concentration. Micro-droplets are mono-dispersed micro-reactors that can be used to encapsulate and detect AP-labeled nanoparticles. Micro-droplets include both empty micro-droplets and fluorescent micro-droplets, while fluorescent micro-droplets are generated from the fluorescence reaction between the APs adhering to a single nanoparticle and corresponding fluorogenic substrates within droplets. By detecting micro-droplets and calculating the proportion of fluorescent micro-droplets to the overall micro-droplets, we can calculate the AP-labeled nanoparticle concentration. The proposed micro-droplet detection method includes the following steps: (1) Gaussian filtering to remove the noise of overall fluorescent targets, (2) a contrast-limited, adaptive histogram equalization processing to enhance the contrast of weakly luminescent micro-droplets, (3) an red maximizing inter-class variance thresholding method (OTSU) to segment the enhanced image for getting the binary map of the overall micro-droplets, (4) a circular Hough transform (CHT) method to detect overall micro-droplets and (5) an intensity-mean-based thresholding segmentation method to extract the fluorescent micro-droplets. The experimental results of fluorescent micro-droplet images show that the average accuracy of our micro-droplet detection method is 0.9586; the average true positive rate is 0.9502; and the average false positive rate is 0.0073. The detection method can be successfully applied to measure AP-labeled nanoparticle concentration in fluorescence microscopy.

  17. Application of fluorescent tracer agent technology to point-of-care gastrointestinal permeability measurement

    Dorshow, Richard B.; Shieh, Jeng-Jong; Rogers, Thomas E.; Hall-Moore, Carla; Shaikh, Nurmohammad; Talcott, Michael; Tarr, Phillip I.

    2016-03-01

    Gut dysfunction, often accompanied by increased mucosal permeability to gut contents, frequently accompanies a variety of human intestinal inflammatory conditions. These disorders include inflammatory bowel diseases (e.g., Crohn's Disease) and environmental enteropathy and enteric dysfunction, a condition strongly associated with childhood malnutrition and stunting in resource poor areas of the world. The most widely used diagnostic assay for gastrointestinal permeability is the lactulose to mannitol ratio (L:M) measurement. These sugars are administered orally, differentially absorbed by the gut, and then cleared from the body by glomerular filtration in the kidney. The amount of each sugar excreted in the urine is measured. The larger sugar, lactulose, is minimally absorbed through a healthy gut. The smaller sugar, mannitol, in contrast, is readily absorbed through both a healthy and injured gut. Thus a higher ratio of lactulose to mannitol reflects increased intestinal permeability. However, several issues prevent widespread use of the L:M ratio in clinical practice. Urine needs to be collected over time intervals of several hours, the specimen then needs to be transported to an analytical laboratory, and sophisticated equipment is required to measure the concentration of each sugar in the urine. In this presentation we show that fluorescent tracer agents with molecular weights similar to those of the sugars, selected from our portfolio of biocompatible renally cleared fluorophores, mimic the L:M ratio test for gut permeability. This fluorescent tracer agent detection technology can be used to overcome the limitations of the L:M assay, and is amenable to point-of-care clinical use.

  18. Combined fluorescence, reflectance, and ground measurements of a stressed Norway spruce forest for forest damage assessment

    Banninger, C.

    1991-01-01

    The detection and monitoring of stress and damage in forested areas is of utmost importance to forest managers for planning purposes. Remote sensing are the most suitable means to obtain this information. This requires that remote sensing data employed in a forest survey be properly chosen and utilized for their ability to measure canopy spectral features directly related to key tree and canopy properties that are indicators of forest health and vitality. Plant reflectance in the visible to short wave IR regions (400 to 2500 nm) provides information on its biochemical, biophysical, and morphological make up, whereas plant fluorescence in the 400 to 750 nm region is more indicative of the capacity and functioning of its photosynthetic apparatus. A measure of both these spectral properties can be used to provide an accurate assessment of stress and damage within the forest canopy. Foliar chlorophyll and nitrogen are essential biochemical constituents required for the proper functioning and maintenance of a plant's biological processes. Chlorophyll-a is the prime reactive center for photosynthesis, by which a plant converts CO2 and H2O into necessary plant products. Nitrogen forms an important component of the amino-acids, enzymes, proteins, alkaloids, and cyanogenic compounds that make up a plant, including its pigments. Both chlorophyll and nitrogen have characteristic absorption features in the visible to short wave IR region. By measuring the wavelength position and depth of these features and the fluorescence response of the foliage, the health and vitality of a canopy can be ascertained. Examples for a stressed Norway spruce forest in south-eastern Austria are presented.

  19. First observation of the depolarization of Thomson scattering radiation by a fusion plasma

    Giudicotti, L.; Kempenaars, M.; McCormack, O.; Flanagan, J.; Pasqualotto, R.; contributors, JET

    2018-04-01

    We report the first experimental observation of the depolarization of the Thomson scattering (TS) radiation, a relativistic effect expected to occur in very high {{T}e} plasmas and never observed so far in a fusion machine. A set of unused optical fibers in the collection optics of the high resolution Thomson scattering system of JET has been used to detect the depolarized TS radiation during a JET campaign with {{T}e}≤slant 8 keV . A linear polarizer with the axis perpendicular to the direction of the incident E-field was placed in front of a fiber optic pair observing a region close to the plasma core, while another fiber pair with no polariser simultaneously observed an adjacent plasma region. The measured intensity ratio was found to be consistent with the theory, taking into account sensitivity coefficients of the two measurement channels determined with post-experiment calibrations and Raman scattering. This depolarization effect is at the basis of polarimetric TS, a different and complementary method for the analysis of TS spectra that can provide significant advantages for {{T}e} measurements in very hot plasmas such as in ITER ≤ft({{T}e}≤slant 40 keV \\right) .

  20. Measurement of uranium quantities by fluorescence-X using neuronal techniques

    Vigneron, V.; Martinez, J.M.; Simon, A.C.; Junca, R.

    1995-01-01

    Layered neural networks are a class of models based on neural computation in biological systems. Connexionists models are made of a large number of simple computing structures, highly interconnected. The weights assigned to the connections enable the encoding of the knowledge required for a task. They can be trained to learn any input-output relation after selecting a suitable architecture. This method appears useful in those cases in which a simple operation and a fast response are needed, together with a reasonable accuracy. They are applied here to the automatic analysis of X-ray fluorescence spectra, obtained with plastic bottles irradiate by collimated beam of photons, emitted by a sealed source of iridium. The method could allow the surveillance of the measurement of uranium quantities in nuclear fuel cycles in processing plants. (authors). 11 refs., 4 figs

  1. Thyroid iodine content measured by x-ray fluorescence in amiodarone-induced thyrotoxicosis: concise communication

    Leger, A.F.; Fragu, P.; Rougier, P.; Laurent, M.F.; Tubiana, M.; Savole, J.C.

    1983-01-01

    Iodine-induced thyrotoxicosis (IiT) is characterized by (a) a low radioiodine uptake, increased by exogenous TSH, and (b) a spontaneous evolution towards cure within a few months. An hypothetical pathogenesis of IiT is an initial inflation in the stores of thyroid hormones during iodine excess, followed by their sudden discharge into the circulation. Thyroid iodine content was measured by fluorescent scanning in 10 patients with amiodarone-induced thyrotoxicosis and in various control groups. Results were found to be high at the onset of the disease and to decrease during its course. The data agree with the hypothetical pathogenesis. Furthermore they may permit exclusion of a painless subacute thyroiditis, which is the main differential diagnosis of IiT

  2. Generation of vector beams using a double-wedge depolarizer: Non-quantum entanglement

    Samlan, C. T.; Viswanathan, Nirmal K.

    2016-07-01

    Propagation of horizontally polarized Gaussian beam through a double-wedge depolarizer generates vector beams with spatially varying state of polarization. Jones calculus is used to show that such beams are maximally nonseparable on the basis of even (Gaussian)-odd (Hermite-Gaussian) mode parity and horizontal-vertical polarization state. The maximum nonseparability in the two degrees of freedom of the vector beam at the double wedge depolarizer output is verified experimentally using a modified Sagnac interferometer and linear analyser projected interferograms to measure the concurrence 0.94±0.002 and violation of Clauser-Horne-Shimony-Holt form of Bell-like inequality 2.704±0.024. The investigation is carried out in the context of the use of vector beams for metrological applications.

  3. Steady-state acceptor fluorescence anisotropy imaging under evanescent excitation for visualisation of FRET at the plasma membrane.

    Viviane Devauges

    Full Text Available We present a novel imaging system combining total internal reflection fluorescence (TIRF microscopy with measurement of steady-state acceptor fluorescence anisotropy in order to perform live cell Förster Resonance Energy Transfer (FRET imaging at the plasma membrane. We compare directly the imaging performance of fluorescence anisotropy resolved TIRF with epifluorescence illumination. The use of high numerical aperture objective for TIRF required correction for induced depolarization factors. This arrangement enabled visualisation of conformational changes of a Raichu-Cdc42 FRET biosensor by measurement of intramolecular FRET between eGFP and mRFP1. Higher activity of the probe was found at the cell plasma membrane compared to intracellularly. Imaging fluorescence anisotropy in TIRF allowed clear differentiation of the Raichu-Cdc42 biosensor from negative control mutants. Finally, inhibition of Cdc42 was imaged dynamically in live cells, where we show temporal changes of the activity of the Raichu-Cdc42 biosensor.

  4. Ultraviolet Fluorescence LiDAR (UFL as a Measurement Tool for Water Quality Parameters in Turbid Lake Conditions

    Heiko Balzter

    2013-09-01

    Full Text Available Despite longstanding contributions to oceanography, similar use of fluorescence light detection and ranging (LiDAR in lake settings is not routine. The potential for ship-mounted, multispectral Ultraviolet Fluorescence LiDAR (UFL to provide rapid, high-resolution data in variably turbid and productive lake conditions are investigated here through a series of laboratory tank and field measurements carried out on Lake Balaton, Hungary. UFL data, calibrated empirically to a set of coinciding conventionally-analyzed samples, provide simultaneous estimates of three important parameters-chlorophyll a(chla, total suspended matter (TSM and colored dissolved organic matter (CDOM. Successful UFL retrievals from both laboratory and field measurements were achieved for chla (0.01–378 mg∙m−3; R = 0.83–0.92, TSM (0.1–130 g∙m−3; R = 0.90–0.96 and CDOM (0.003–0.125 aCDOM(440; R = 0.80–0.97. Fluorescence emission at 685 nm is shown through tank measurements to display robust but distinct relationships with chla concentration for the two cultured algae species investigated (cyanobacteria, Cylindrospermopsis raciborskii, and chlorophyta, Scenedesmus armatus. The ratio between fluorescence emissions measured at 650 nm, related to the phycocyanin fluorescence maximum, to that at 685 nm is demonstrated to effectively distinguish these two species. Validation through both laboratory measurements and field measurements confirmed that site specific calibration is necessary. This study presents the first known assessment and application of ship-mounted fluorescence LiDAR in freshwater lake conditions and demonstrates the use of UFL in measuring important water quality parameters despite the more complicated hydro-optic conditions of inland waters.

  5. Measurement of resistance to solute transport across surfactant-laden interfaces using a Fluorescence Recovery After Photobleaching (FRAP) technique

    Browne, Edward P.; Nivaggioli, Thierry; Hatton, T. Alan

    1994-01-01

    A noninvasive fluorescence recovery after photobleaching (FRAP) technique is under development to measure interfacial transport in two phase systems without disturbing the interface. The concentration profiles of a probe solute are measured in both sides of the interface by argon-ion laser, and the system relaxation is then monitored by a microscope-mounted CCD camera.

  6. Using microencapsulated fluorescent dyes for simultaneous measurement of temperature and velocity fields

    Vogt, J; Stephan, P

    2012-01-01

    In this paper, a novel particle image thermometry method based on microcapsules filled with a fluorescent dye solution is described. The microcapsules consist of a liquid core of hexadecane in which the dye is dissolved and a solid polymer shell. The combination of a temperature-sensitive dye (Pyrromethene 597-8C9) and a dye showing a relatively smaller temperature sensitivity (Pyrromethene 567) in hexadecane makes application of the ratiometric LIF possible. This is necessary to compensate for fluctuations of the illuminating pulsed Nd:YAG laser (532 nm) as well as the different particle sizes. The applicability of this measurement technique is demonstrated for a cubic test cell (10 × 10 × 10 mm 3 ) with flow and temperature fields driven by natural convection and a capillary tube (1.16 mm inner diameter) inducing a temperature gradient and a Hagen–Poiseuille velocity profile. For the first case, a light sheet illumination is used making two optical accesses necessary. In the second case an inverted microscope is used, so only one optical access is needed and a volume illumination is applied. The technique facilitates high-resolution measurements (first case: 79 × 79 μm 2 ; second case: 8 × 8 μm 2 ). Although the measurement uncertainty is high compared to LIF measurements with dissolved dyes, temperature fields can be reproduced very well, and the experimental results are in good agreement with numerical computations. (paper)

  7. Laser Induced Fluorescence Measurements in a Hall Thruster Plume as a Function of Background Pressure

    Spektor, R.; Tighe, W. G.; Kamhawi, H.

    2016-01-01

    A set of Laser Induced Fluorescence (LIF) measurements in the near-field region of the NASA- 173M Hall thruster plume is presented at four background pressure conditions varying from 9.4 x 10(exp -6) torr to 3.3 x 10(exp -5) torr. The xenon ion velocity distribution function was measured simultaneously along the axial and radial directions. An ultimate exhaust velocity of 19.6+/-0.25 km/s achieved at a distance of 20 mm was measured, and that value was not sensitive to pressure. On the other hand, the ion axial velocity at the thruster exit was strongly influenced by pressure, indicating that the accelerating electric field moved inward with increased pressure. The shift in electric field corresponded to an increase in measured thrust. Pressure had a minor effect on the radial component of ion velocity, mainly affecting ions exiting close to the channel inner wall. At that radial location the radial component of ion velocity was approximately 1000 m/s greater at the lowest pressure than at the highest pressure. A reduction of the inner magnet coil current by 0.6 A resulted in a lower axial ion velocity at the channel exit while the radial component of ion velocity at the channel inner wall location increased by 1300 m/s, and at the channel outer wall location the radial ion velocity remained unaffected. The ultimate exhaust velocity was not significantly affected by the inner magnet current.

  8. Effect of the sample matrix on measurement uncertainty in X-ray fluorescence analysis

    Morgenstern, P.; Brueggemann, L.; Wennrich, R.

    2005-01-01

    The estimation of measurement uncertainty, with reference to univariate calibration functions, is discussed in detail in the Eurachem Guide 'Quantifying Uncertainty in Analytical Measurement'. The adoption of these recommendations to quantitative X-ray fluorescence analysis (XRF) involves basic problems which are above all due to the strong influence of the sample matrix on the analytical response. In XRF-analysis, the proposed recommendations are consequently applicable only to the matrix corrected response. The application is also restricted with regard to both the matrices and analyte concentrations. In this context the present studies are aimed at the problems to predict measurement uncertainty also with reference to more variable sample compositions. The corresponding investigations are focused on the use of the intensity of the Compton scattered tube line as an internal standard to assess the effect of the individual sample matrix on the analytical response relatively to a reference matrix. Based on this concept the estimation of the measurement uncertainty of an analyte presented in an unknown specimen can be predicted in consideration of the data obtained under defined matrix conditions

  9. Light stress effect and by nitrogen deficiency in plants of Petiveria alliacea measured with two-chlorophyll-fluorescence technique

    Zuluaga, H.; Oviedo, A.; Solarte, Efrain; Pena, E. J.

    2004-10-01

    The chlorophyll fluorescence was studied in Petiveria alliacea plants exposed to different nitrogen concentrations and light radiation, the response was measured by two different forms; (1) measuring the photosynthetic efficiency with a pulse amplitude modulated fluorometro (PAM) emitted by a 650 nm diode and (2) measuring the fluorescence spectra caused by high power 452 nm diode with a SD2000 spectrometer. It was found out that the photosynthetic efficiency decreased in the plants exposed to high radiance and low nitrogen. Two chlorophyll fluorescence peaks were observed on 684 nm and 739 nm, the intensities in this wavelengths are inversely related with the light radiance. The correlation between the FIR and photosynthetic efficiency was very strong (r2 = -0.809, p Alliacea plants.

  10. Measurements of IO in the Tropical Marine Boundary Layer using Laser-Induced Fluorescence Spectroscopy

    Walker, H.; Ingham, T.; Heard, D. E.

    2012-12-01

    Halogenated short-lived substances (VSLS) are emitted from the oceans by marine species such as macroalgae and phytoplankton and contribute to halogen loading in the troposphere and lower stratosphere. Transport of halogenated VSLS into the stratosphere occurs mainly in the tropics, where ascending warm air carries them aloft, and leads to catalytic depletion of stratospheric ozone on a global scale and formation of the Antarctic ozone hole. The tropical marine environment is therefore an important region in which to study the effects of these short-lived halogen species on ozone depletion. The SHIVA (Stratospheric Ozone: Halogen Impacts in a Varying Atmosphere) project combines ship-borne, aircraft-based and ground-based measurements in and over the South China Sea and the Sulu Sea, and around the coast of Malaysian Borneo, to reduce uncertainties in the amount of halogenated VSLS reaching the stratosphere, the associated ozone depletion, and the effects of a changing climate on these processes. In this work we present measurements of IO radicals made onboard the German research vessel Sonne during SHIVA, between Singapore and Manila. IO is formed via photolysis of iodine-containing source gases (e.g. I2, CH3I) to produce I atoms, which react with ozone. It is therefore an important species to consider when assessing the impacts of halogen chemistry on ozone depletion. Measurements of IO were made over a two-week period by the University of Leeds Laser-Induced Fluorescence (LIF) instrument, which excites IO radicals at λ ~ 445 nm and detects the resultant fluorescence at λ ~ 512 nm. A suite of supporting gas- and aqueous-phase measurements were also made, including concentrations of halocarbons (e.g. CHBr3, CH3I), trace pollutant gases (e.g. CO, O3, NOx), and biological parameters (e.g. abundance and speciation of phytoplankton). Preliminary data analysis indicates that IO was detected above the instrumental limit of detection (0.3 pptv for a 30 minute averaging

  11. Two Photon Absorption Laser Induced Fluorescence for Neutral Hydrogen Profile Measurements

    Scime, Earl E. [West Virginia Univ., Morgantown, WV (United States)

    2016-09-23

    The magnitude and spatial dependence of neutral density in magnetic confinement fusion experiments is a key physical parameter, particularly in the plasma edge. Modeling codes require precise measurements of the neutral density to calculate charge-exchange power losses and drag forces on rotating plasmas. However, direct measurements of the neutral density are problematic. In this work, we proposed to construct a laser-based diagnostic capable of providing spatially resolved measurements of the neutral density in the edge of plasma in the DIII-D tokamak. The diagnostic concept is based on two-photon absorption laser induced fluorescence (TALIF). By injecting two beams of 205 nm light (co or counter propagating), ground state hydrogen (or deuterium or tritium) can be excited from the n = 1 level to the n = 3 level at the location where the two beams intersect. Individually, the beams experience no absorption, and therefore have no difficulty penetrating even dense plasmas. After excitation, a fraction of the hydrogen atoms decay from the n = 3 level to the n = 2 level and emit photons at 656 nm (the Hα line). Calculations based on the results of previous TALIF experiments in magnetic fusion devices indicated that a laser pulse energy of approximately 3 mJ delivered in 5 ns would provide sufficient signal-to-noise for detection of the fluorescence. In collaboration with the DIII-D engineering staff and experts in plasma edge diagnostics for DIII-D from Oak Ridge National Laboratory (ORNL), WVU researchers designed a TALIF system capable of providing spatially resolved measurements of neutral deuterium densities in the DIII-D edge plasma. The laser systems were specified, purchased, and assembled at WVU. The TALIF system was tested on a low-power hydrogen discharge at WVU and the plan was to move the instrument to DIII-D for installation in collaboration with ORNL researchers. After budget cuts at DIII-D, the DIII-D facility declined to support

  12. Two Photon Absorption Laser Induced Fluorescence for Neutral Hydrogen Profile Measurements

    Scime, Earl E.

    2016-01-01

    The magnitude and spatial dependence of neutral density in magnetic confinement fusion experiments is a key physical parameter, particularly in the plasma edge. Modeling codes require precise measurements of the neutral density to calculate charge-exchange power losses and drag forces on rotating plasmas. However, direct measurements of the neutral density are problematic. In this work, we proposed to construct a laser-based diagnostic capable of providing spatially resolved measurements of the neutral density in the edge of plasma in the DIII-D tokamak. The diagnostic concept is based on two-photon absorption laser induced fluorescence (TALIF). By injecting two beams of 205 nm light (co or counter propagating), ground state hydrogen (or deuterium or tritium) can be excited from the n = 1 level to the n = 3 level at the location where the two beams intersect. Individually, the beams experience no absorption, and therefore have no difficulty penetrating even dense plasmas. After excitation, a fraction of the hydrogen atoms decay from the n = 3 level to the n = 2 level and emit photons at 656 nm (the H α line). Calculations based on the results of previous TALIF experiments in magnetic fusion devices indicated that a laser pulse energy of approximately 3 mJ delivered in 5 ns would provide sufficient signal-to-noise for detection of the fluorescence. In collaboration with the DIII-D engineering staff and experts in plasma edge diagnostics for DIII-D from Oak Ridge National Laboratory (ORNL), WVU researchers designed a TALIF system capable of providing spatially resolved measurements of neutral deuterium densities in the DIII-D edge plasma. The laser systems were specified, purchased, and assembled at WVU. The TALIF system was tested on a low-power hydrogen discharge at WVU and the plan was to move the instrument to DIII-D for installation in collaboration with ORNL researchers. After budget cuts at DIII-D, the DIII-D facility declined to support installation on their

  13. Factors affecting in vivo measurement precision and accuracy of 109Cd K x-ray fluorescence measurements

    McNeill, F.E.; Stokes, L.; Kaye, W.E.

    1999-01-01

    109 Cd K x-ray fluorescence (XRF) measurement systems from two research centres were used to measure tibia lead content in a population (n=530) of young adults. The group mean bone lead contents (±SEM) determined by McMaster University (n=214) and the University of Maryland (n=316) were 2.80±0.51 and 2.33±0.50 μg Pb/(g bone mineral) respectively. The mean difference of 0.47±0.71 μg Pb/(g bone mineral) was not significant. There was no evidence of a systematic difference between measurements from the two systems. Measurement uncertainties for the young adults were poorer overall than uncertainties for a population of occupationally exposed men. This was because obese subjects and women were included in the study. Regressions of precision against body mass index (BMI, defined as weight/height 2 ) determined that uncertainties increased with BMI and were poorer for women than men. Measurement uncertainties (1σ) were >8 μg Pb/(g bone mineral) for women with a BMI > 0.004 kg cm -2 . Poor-precision data affected population estimates of bone lead content; an inverse correlation was found between precision and bone lead content. A small number (0.4%) of individual measurements with poor uncertainties were inaccurate to within the precision. It is suggested that obese subjects, whose BMI > 0.004 kg cm -2 , should be excluded from 109 Cd K XRF studies, as the measurement provides limited information and may be inaccurate. (author)

  14. Nuclear Resonance Fluorescence to Measure Plutonium Mass in Spent Nuclear Fuel

    Ludewigt, Bernhard A; Quiter, Brian J.; Ambers, Scott D.

    2011-01-14

    The Next Generation Safeguard Initiative (NGSI) of the U.S Department of Energy is supporting a multi-lab/university collaboration to quantify the plutonium (Pu) mass in spent nuclear fuel (SNF) assemblies and to detect the diversion of pins with non-destructive assay (NDA) methods. The following 14 NDA techniques are being studied: Delayed Neutrons, Differential Die-Away, Differential Die-Away Self-Interrogation, Lead Slowing Down Spectrometer, Neutron Multiplicity, Passive Neutron Albedo Reactivity, Total Neutron (Gross Neutron), X-Ray Fluorescence, {sup 252}Cf Interrogation with Prompt Neutron Detection, Delayed Gamma, Nuclear Resonance Fluorescence, Passive Prompt Gamma, Self-integration Neutron Resonance Densitometry, and Neutron Resonance Transmission Analysis. Understanding and maturity of the techniques vary greatly, ranging from decades old, well-understood methods to new approaches. Nuclear Resonance Fluorescence (NRF) is a technique that had not previously been studied for SNF assay or similar applications. Since NRF generates isotope-specific signals, the promise and appeal of the technique lies in its potential to directly measure the amount of a specific isotope in an SNF assay target. The objectives of this study were to design and model suitable NRF measurement methods, to quantify capabilities and corresponding instrumentation requirements, and to evaluate prospects and the potential of NRF for SNF assay. The main challenge of the technique is to achieve the sensitivity and precision, i.e., to accumulate sufficient counting statistics, required for quantifying the mass of Pu isotopes in SNF assemblies. Systematic errors, considered a lesser problem for a direct measurement and only briefly discussed in this report, need to be evaluated for specific instrument designs in the future. Also, since the technical capability of using NRF to measure Pu in SNF has not been established, this report does not directly address issues such as cost, size

  15. Spin Depolarization due to Beam-Beam Interaction in NLC

    Thompson, Kathleen A

    2001-01-04

    Calculations of spin depolarization effects due to the beam-beam interaction are presented for several NLC designs. The depolarization comes from both classical (Bargmann-Michel-Telegdi precession) and quantum (Sokolov-Ternov spin-flip) effects. It is anticipated that some physics experiments at future colliders will require a knowledge of the polarization to better than 0.5% precision. We compare the results of CAIN simulations with the analytic estimates of Yokoya and Chen for head-on collisions. We also study the effects of transverse offsets and beamstrahlung-induced energy spread.

  16. The continuum of spreading depolarizations in acute cortical lesion development

    Hartings, Jed A; Shuttleworth, C William; Kirov, Sergei A

    2017-01-01

    A modern understanding of how cerebral cortical lesions develop after acute brain injury is based on Aristides Leão's historic discoveries of spreading depression and asphyxial/anoxic depolarization. Treated as separate entities for decades, we now appreciate that these events define a continuum....... The causal role of these waves in lesion development has been proven by real-time monitoring of electrophysiology, blood flow, and cytotoxic edema. The spreading depolarization continuum further applies to other models of acute cortical lesions, suggesting that it is a universal principle of cortical lesion...

  17. Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

    Piotr Kowalczuk; Monika Zabłocka; Sławomir Sagan; Karol Kuliński

    2010-01-01

    This study presents results from field surveys performed in 2008 and 2009 in the southern Baltic in different seasons. The main goal of these measurements was to identify the empirical relationships between DOM optical properties and DOC. CDOM absorption and fluorescence and DOC concentrations were measured during thirteen research cruises. The values of the CDOM absorption coefficient at 370 nm aCDOM(370) ranged from 0.70 m-1 to 7.94 m-1, and CDOM fluorescence intensities (ex./em. 370/460) I...

  18. Temperature field measurement research in high-speed diesel engine using laser induced fluorescence technology

    Liu, Yongfeng; Zhang, You-tong; Gou, Chenhua; Tian, Hongsen

    2008-12-01

    Temperature laser- induced- fluorescence (LIF) 2-D imaging measurements using a new multi-spectral detection strategy are reported for high pressure flames in high-speed diesel engine. Schematic of the experimental set-up is outlined and the experimental data on the diesel engine is summarized. Experiment injection system is a third generation Bosch high-pressure common rail featuring a maximum pressure of 160 MPa. The injector is equipped with a six-hole nozzle, where each hole has a diameter of 0.124 mm. and slightly offset (by 1.0 mm) to the center of the cylinder axis to allow a better cooling of the narrow bridge between the exhaust valves. The measurement system includes a blower, which supplied the intake flow rate, and a prototype single-valve direct injection diesel engine head modified to lay down the swirled-type injector. 14-bit digital CCD cameras are employed to achieve a greater level of accuracy in comparison to the results of previous measurements. The temperature field spatial distributions in the cylinder for different crank angle degrees are carried out in a single direct-injection diesel engine.

  19. Speed of disentanglement in multiqubit systems under a depolarizing channel

    Zhang, Fu-Lin, E-mail: flzhang@tju.edu.cn; Jiang, Yue; Liang, Mai-Lin, E-mail: mailinliang@yahoo.com.cn

    2013-06-15

    We investigate the speed of disentanglement in the multiqubit systems under the local depolarizing channel, in which each qubit is independently coupled to the environment. We focus on the bipartition entanglement between one qubit and the remaining qubits constituting the system, which is measured by the negativity. For the two-qubit system, the speed for the pure state completely depends on its entanglement. The upper and lower bounds of the speed for arbitrary two-qubit states, and the necessary conditions for a state achieving them, are obtained. For the three-qubit system, we study the speed for pure states, whose entanglement properties can be completely described by five local-unitary-transformation invariants. An analytical expression of the relation between the speed and the invariants is derived. The speed is enhanced by the three-tangle which is the entanglement among the three qubits, but reduced by the two-qubit correlations outside the concurrence. The decay of the negativity can be restrained by the other two negativity with the coequal sense. The unbalance between two qubits can reduce the speed of disentanglement of the remaining qubit in the system, and even can retrieve the entanglement partially. For the k-qubit systems in an arbitrary superposition of Greenberger–Horne–Zeilinger state and W state, the speed depends almost entirely on the amount of the negativity when k increases to five or six. An alternative quantitative definition for the robustness of entanglement is presented based on the speed of disentanglement, with comparison to the widely studied robustness measured by the critical amount of noise parameter where the entanglement vanishes. In the limit of large number of particles, the alternative robustness of the Greenberger–Horne–Zeilinger-type states is inversely proportional to k, and the one of the W states approaches 1/√(k)

  20. Large plasma-membrane depolarization precedes rapid blue-light-induced growth inhibition in cucumber

    Spalding, E. P.; Cosgrove, D. J.

    1989-01-01

    Blue-light (BL)-induced suppression of elongation of etiolated Cucumis sativus L. hypocotyls began after a 30-s lag time, which was halved by increasing the fluence rate from 10 to 100 micromoles m-2 s-1. Prior to the growth suppression, the plasma-membrane of the irradiated cells depolarized by as much as 100 mV, then returned within 2-3 min to near its initial value. The potential difference measured with surface electrodes changed with an identical time course but opposite polarity. The lag time for the change in surface potential showed an inverse dependence on fluence rate, similar to the lag for the growth inhibition. Green light and red light caused neither the electrical response nor the rapid inhibition of growth. The depolarization by BL did not propagate to nonirradiated regions and exhibited a refractory period of about 10 min following a BL pulse. Fluence-response relationships for the electrical and growth responses provide correlational evidence that the plasma-membrane depolarization reflects an event in the transduction chain of this light-growth response.

  1. Mapping cropland GPP in the north temperate region with space measurements of chlorophyll fluorescence

    Guanter, L.; Zhang, Y.; Jung, M.; Joiner, J.; Voigt, M.; Huete, A. R.; Zarco-Tejada, P.; Frankenberg, C.; Lee, J.; Berry, J. A.; Moran, S. M.; Ponce-Campos, G.; Beer, C.; Camps-Valls, G.; Buchmann, N. C.; Gianelle, D.; Klumpp, K.; Cescatti, A.; Baker, J. M.; Griffis, T.

    2013-12-01

    Monitoring agricultural productivity is important for optimizing management practices in a world under a continuous increase of food and biofuel demand. We used new space measurements of sun-induced chlorophyll fluorescence (SIF), a vegetation parameter intrinsically linked to photosynthesis, to capture photosynthetic uptake of the crop belts in the north temperate region. The following data streams and procedures have been used in this analysis: (1) SIF retrievals have been derived from measurements of the MetOp-A / GOME-2 instrument in the 2007-2011 time period; (2) ensembles of process-based and data-driven biogeochemistry models have been analyzed in order to assess the capability of global models to represent crop gross primary production (GPP); (3) flux tower-based GPP estimates covering the 2007-2011 time period have been extracted over 18 cropland and grassland sites in the Midwest US and Western Europe from the Ameriflux and the European Fluxes Database networks; (4) large-scale NPP estimates have been derived by the agricultural inventory data sets developed by USDA-NASS and Monfreda et al. The strong linear correlation between the SIF space retrievals and the flux tower-based GPP, found to be significantly higher than that between reflectance-based vegetation indices (EVI, NDVI and MTCI) and GPP, has enabled the direct upscaling of SIF to cropland GPP maps at the synoptic scale. The new crop GPP estimates we derive from the scaling of SIF space retrievals are consistent with both flux tower GPP estimates and agricultural inventory data. These new GPP estimates show that crop productivity in the US Western Corn Belt, and most likely also in the rice production areas in the Indo-Gangetic plain and China, is up to 50-75% higher than estimates by state-of-the-art data-driven and process-oriented biogeochemistry models. From our analysis we conclude that current carbon models have difficulties in reproducing the special conditions of those highly productive

  2. A Starting Point for Fluorescence-Based Single-Molecule Measurements in Biomolecular Research

    Alexander Gust

    2014-09-01

    Full Text Available Single-molecule fluorescence techniques are ideally suited to provide information about the structure-function-dynamics relationship of a biomolecule as static and dynamic heterogeneity can be easily detected. However, what type of single-molecule fluorescence technique is suited for which kind of biological question and what are the obstacles on the way to a successful single-molecule microscopy experiment? In this review, we provide practical insights into fluorescence-based single-molecule experiments aiming for scientists who wish to take their experiments to the single-molecule level. We especially focus on fluorescence resonance energy transfer (FRET experiments as these are a widely employed tool for the investigation of biomolecular mechanisms. We will guide the reader through the most critical steps that determine the success and quality of diffusion-based confocal and immobilization-based total internal reflection fluorescence microscopy. We discuss the specific chemical and photophysical requirements that make fluorescent dyes suitable for single-molecule fluorescence experiments. Most importantly, we review recently emerged photoprotection systems as well as passivation and immobilization strategies that enable the observation of fluorescently labeled molecules under biocompatible conditions. Moreover, we discuss how the optical single-molecule toolkit has been extended in recent years to capture the physiological complexity of a cell making it even more relevant for biological research.

  3. The measurement of the fluorescence response of plastic scintillator ST1422 to neutron

    Luo Xiaobing; Xia Yijun; Yang Zhihua; Zhang Chuanfei; Peng Taiping; Li Rurong; Zhang Jianhua

    2004-01-01

    By using the T(p,n) and D(d,n) reactions as neutron resources, the fluorescence response of ST1422 plastic scintillators (40 mm in diameter and 5 mm in thickness) was determined in he neutron energy range of 0.655-5 MeV. The experimental results show a nonlinear response of fluorescence with neutron energy. (authors)

  4. Precise measurement of the absolute fluorescence yield of the 337 nm band in atmospheric gases

    Ave, M.; Boháčová, Martina; Curry, E.; Di Carlo, P.; Di Giulio, C.; Facal San Luis, P.; Gonzales, D.; Hojvat, C.; Hörandel, J.; Hrabovský, M.; Iarlori, M.; Keilhauer, B.; Klages, H.; Kleifges, M.; Kuehn, F.; Li, S.; Monasor, M.; Nožka, Libor; Palatka, Miroslav; Petrera, S.; Privitera, P.; Řídký, Jan; Rizi, V.; Rouille D’Orfeuil, B.; Salamida, F.; Schovánek, Petr; Smida, R.; Spinka, H.; Ulrich, A.; Verzi, V.; Williams, C.

    2013-01-01

    Roč. 42, Feb (2013), 90-102 ISSN 0927-6505 R&D Projects: GA MŠk(CZ) LA08016 Institutional support: RVO:68378271 Keywords : nitrogen fluorescence yield * air fluorescence detection * ultra-high energy cosmic rays Subject RIV: BF - Elementary Particles and High Energy Physics Impact factor: 4.450, year: 2013

  5. Ultrafast polarized fluorescence measurements on monomeric and self-associated melittin

    Pandit, A.; Larsen, O.F.A.; Stokkum, van I.H.M.; Grondelle, van R.; Kraayenhof, R.; Amerongen, van H.

    2003-01-01

    The anisotropic and magic-angle fluorescence decay of the single tryptophan (Trp) residue of melittin, a bee venom peptide, was investigated by time-resolved fluorescence anisotropy using a streak camera setup. The peptide was dissolved either in distilled water or in Hepes/NaOH buffer containing

  6. Measurement of fuel corrosion products using planar laser-induced fluorescence

    Wantuck, P.J.; Sappey, A.D.; Butt, D.P.

    1993-01-01

    Characterizing the corrosion behavior of nuclear fuel material in a high-temperature hydrogen environment is critical for ascertaining the operational performance of proposed nuclear thermal propulsion (NTP) concepts. In this paper, we describe an experimental study undertaken to develop and test non-intrusive, laser-based diagnostics for ultimately measuring the distribution of key gas-phase corrosion products expected to evolve during the exposure of NTP fuel to hydrogen. A laser ablation technique is used to produce high temperature, vapor plumes from uranium-free zirconium carbide (ZrC) and niobium carbide (NbC) forms for probing by various optical diagnostics including planar laser-induced fluorescence (PLIF). We discuss the laser ablation technique, results of plume emission measurements, and we describe both the actual and proposed planar LIF schemes for imaging constituents of the ablated ZrC and NbC plumes. Envisioned testing of the laser technique in rf-heated, high temperature gas streams is also discussed

  7. Concentration of atomic hydrogen in a dielectric barrier discharge measured by two-photon absorption fluorescence

    Dvořák, P.; Talába, M.; Obrusník, A.; Kratzer, J.; Dědina, J.

    2017-08-01

    Two-photon absorption laser-induced fluorescence (TALIF) was utilized for measuring the concentration of atomic hydrogen in a volume dielectric barrier discharge (DBD) ignited in mixtures of Ar, H2 and O2 at atmospheric pressure. The method was calibrated by TALIF of krypton diluted in argon at atmospheric pressure, proving that three-body collisions had a negligible effect on quenching of excited krypton atoms. The diagnostic study was complemented with a 3D numerical model of the gas flow and a zero-dimensional model of the chemistry in order to better understand the reaction kinetics and identify the key pathways leading to the production and destruction of atomic hydrogen. It was determined that the density of atomic hydrogen in Ar-H2 mixtures was in the order of 1021 m-3 and decreased when oxygen was added into the gas mixture. Spatially resolved measurements and simulations revealed a sharply bordered region with low atomic hydrogen concentration when oxygen was added to the gas mixture. At substoichiometric oxygen/hydrogen ratios, this H-poor region is confined to an area close to the gas inlet and it is shown that the size of this region is not only influenced by the chemistry but also by the gas flow patterns. Experimentally, it was observed that a decrease in H2 concentration in the feeding Ar-H2 mixture led to an increase in H production in the DBD.

  8. Fluorescence measurement of atomic oxygen concentration in a dielectric barrier discharge

    Dvořák, P.; Mrkvičková, M.; Obrusník, A.; Kratzer, J.; Dědina, J.; Procházka, V.

    2017-06-01

    Concentration of atomic oxygen was measured in a volume dielectric barrier discharge (DBD) ignited in mixtures of Ar + O2(+ H2) at atmospheric pressure. Two-photon absorption laser induced fluorescence (TALIF) of atomic oxygen was used and this method was calibrated by TALIF of Xe in a mixture of argon and a trace of xenon. The calibration was performed at atmospheric pressure and it was shown that quenching by three-body collisions has negligible effect on the life time of excited Xe atoms. The concentration of atomic oxygen in the DBD was around 1021 m-3 and it was stable during the whole discharge period. The concentration did not depend much on the electric power delivered to the discharge provided that the power was sufficiently high so that the visible discharge filled the whole reactor volume. Both the addition of hydrogen or replacing of argon by helium led to a significant decrease of atomic oxygen concentration. The TALIF measurements of O concentration levels in the DBD plasma performed in this work are made use of e.g. in the field analytical chemistry. The results contribute to understanding the processes of analyte hydride preconcentration and subsequent atomization in the field of trace element analysis where DBD plasma atomizers are employed.

  9. Elasticity maps of living neurons measured by combined fluorescence and atomic force microscopy.

    Spedden, Elise; White, James D; Naumova, Elena N; Kaplan, David L; Staii, Cristian

    2012-09-05

    Detailed knowledge of mechanical parameters such as cell elasticity, stiffness of the growth substrate, or traction stresses generated during axonal extensions is essential for understanding the mechanisms that control neuronal growth. Here, we combine atomic force microscopy-based force spectroscopy with fluorescence microscopy to produce systematic, high-resolution elasticity maps for three different types of live neuronal cells: cortical (embryonic rat), embryonic chick dorsal root ganglion, and P-19 (mouse embryonic carcinoma stem cells) neurons. We measure how the stiffness of neurons changes both during neurite outgrowth and upon disruption of microtubules of the cell. We find reversible local stiffening of the cell during growth, and show that the increase in local elastic modulus is primarily due to the formation of microtubules. We also report that cortical and P-19 neurons have similar elasticity maps, with elastic moduli in the range 0.1-2 kPa, with typical average values of 0.4 kPa (P-19) and 0.2 kPa (cortical). In contrast, dorsal root ganglion neurons are stiffer than P-19 and cortical cells, yielding elastic moduli in the range 0.1-8 kPa, with typical average values of 0.9 kPa. Finally, we report no measurable influence of substrate protein coating on cell body elasticity for the three types of neurons. Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  10. The problem of radiative depolarization in the 'Siberian Snake'

    Schwitters, R.

    1979-01-01

    As pointed out by Derbenev and Kondratenko and by the LEP Study Group, a 'Siberian Snake' may be a convenient method for providing longitudinally polarized beams at LEP. The author shows that at the highest LEP energies (approximately>60 GeV) synchrotron radiation with spin-flip may depolarize the beams. (Auth.)

  11. Depolarization temperature and piezoelectric properties of Na1/2 ...

    1/2Bi1/2(Zn1/3Nb2/3)O3, was synthesized using the two-stage calcination method and depolarization temperatures and piezoelectric properties were also investigated. The XRD analysis showed that the ceramics system had a morphotropic ...

  12. Depolarization temperature and piezoelectric properties of TiO3 ...

    WINTEC

    2TiO3–Na1/2Bi1/2(Zn1/3Nb2/3)O3, was synthesized using the two-stage calcination method and depolarization temperatures and piezoelectric properties were also investigated. The XRD analysis showed that the ceramics system had a ...

  13. Electrical characterization of polymer matrix — TiO2 filler composites through isothermal polarization / depolarization currents and I-V tests

    Stavrakas, Ilias; Triantis, Dimos; Hloupis, George; Moutzouris, Konstantinos

    2014-04-01

    Specimens of polymer matrix — ceramic TiO2 filler composites were prepared. The contribution of the filler content on the electrical conductivity and energy storage properties of the samples was examined. I-V and Isothermal Polarization/Depolarization Current (IPC/IDC) measurements were conducted. Dc conductivity values directly calculated from the I-V curves exhibited excellent agreement with corresponding values derived from the IPC/IDC recordings. Standard models were employed for fitting the IPC/IDC data. In specific, the short and the very long depolarization times were fitted by use of power laws of different slopes, while the intermediate depolarization times were fitted as a sum of three exponential decays. The present study reveals a strong dependence of the depolarization and polarization processes, as well as of the dc conductivity, on the filler concentration.

  14. Measurement of apoptosis by SCAN©, a system for counting and analysis of fluorescently labelled nuclei

    Neta Shlezinger

    2014-11-01

    Full Text Available Apoptosis-like programmed cell death (A-PCD is a universal process common to all types of eukaryotic organisms. Because A-PCD-associated processes are conserved, it is possible to define A-PCD by a standard set of markers. Many of the popular methods to measure A-PCD make use of fluorescent ligands that change in intensity or cellular localization during A-PCD. In single cell organisms, it is possible to quantify levels of A-PCD by scoring the number of apoptotic cells using flow cytometry instruments. In a multicellular organism, quantification of A-PCD is more problematic due to the complex nature of the tissue. The situation is further complicated in filamentous fungi, in which nuclei are divided between compartments, each containing a number of nuclei, which can also migrate between the compartments. We developed SCAN©, a System for Counting and Analysis of Nuclei, and used it to measure A-PCD according to two markers – chromatin condensation and DNA strand breaks. The package includes three modules designed for counting the number of nuclei in multi-nucleated domains, scoring the relative number of nuclei with condensed chromatin, and calculating the relative number of nuclei with DNA strand breaks. The method provides equal or better results compared with manual counting, the analysis is fast and can be applied on large data sets. While we demonstrated the utility of the software for measurement of A-PCD in fungi, the method is readily adopted for measurement of A-PCD in other types of multicellular specimens.

  15. Ambient measurements of biological aerosol particles near Killarney, Ireland: a comparison between real-time fluorescence and microscopy techniques

    Healy, D. A.; Huffman, J. A.; O'Connor, D. J.; Pöhlker, C.; Pöschl, U.; Sodeau, J. R.

    2014-08-01

    Primary biological aerosol particles (PBAPs) can contribute significantly to the coarse particle burden in many environments. PBAPs can thus influence climate and precipitation systems as cloud nuclei and can spread disease to humans, animals, and plants. Measurement data and techniques for PBAPs in natural environments at high time- and size resolution are, however, sparse, and so large uncertainties remain in the role that biological particles play in the Earth system. In this study two commercial real-time fluorescence particle sensors and a Sporewatch single-stage particle impactor were operated continuously from 2 August to 2 September 2010 at a rural sampling location in Killarney National Park in southwestern Ireland. A cascade impactor was operated periodically to collect size-resolved particles during exemplary periods. Here we report the first ambient comparison of a waveband integrated bioaerosol sensor (WIBS-4) with a ultraviolet aerodynamic particle sizer (UV-APS) and also compare these real-time fluorescence techniques with results of fluorescence and optical microscopy of impacted samples. Both real-time instruments showed qualitatively similar behavior, with increased fluorescent bioparticle concentrations at night, when relative humidity was highest and temperature was lowest. The fluorescent particle number from the FL3 channel of the WIBS-4 and from the UV-APS were strongly correlated and dominated by a 3 μm mode in the particle size distribution. The WIBS FL2 channel exhibited particle modes at approx. 1 and 3 μm, and each was correlated with the concentration of fungal spores commonly observed in air samples collected at the site (ascospores, basidiospores, Ganoderma spp.). The WIBS FL1 channel exhibited variable multimodal distributions turning into a broad featureless single mode after averaging, and exhibited poor correlation with fungal spore concentrations, which may be due to the detection of bacterial and non-biological fluorescent

  16. Time-resolved spectroscopy of the probe fluorescence in the study of human blood protein dynamic structure on SR beam

    Dobretsov, G.E.; Kurek, N.K.; Syrejshchikova, T.I.; Yakimenko, M.N.; Clarke, D.T.; Jones, G.R.; Munro, I.H.

    2000-01-01

    Time-resolved spectroscopy on the SRS of the Daresbury Laboratory was used for the study of the human serum lipoproteins and human blood albumins with fluorescent probes K-37 and K-35, developed in Russia. The probe K-37 was found sensitive to the difference in dynamic properties of the lipid objects. Two sets of the parameters were used for the description of lipid dynamic structure: (1) time-resolved fluorescence spectra and (2) time-resolved fluorescence depolarization as a function of rotational mobility of lipid molecules. Each measured dynamic parameter reflected the monotonous changes of dynamic properties in the range: lipid spheres-very low density lipoproteins-low density lipoproteins-high density lipoproteins-phospholipid liposomes. The range is characterized by the increase of the ratio polar/ nonpolar lipids. Thus, time-resolved fluorescence could be used to detect some structural modifications in lipoproteins related to atherosclerosis and subsequent cardiovascular diseases development

  17. Thermally stimulated depolarization currents in the natural fluorite

    Valerio, Mario Ernesto Giroldo

    1986-01-01

    The present work deals with natural calcium fluoride from Criciuma, Santa Catarina. Thermally Stimulated Depolarization Currents (TSDC) can be used to determine the properties of dipole defects present in this crystal. The TSDC spectrum of this material shows three bands in the temperature range of 80 to 450 K. The first one, at 130 K, is due the dipoles formed by a trivalent impurity and an interstitial fluorine ion in the next nearest position of an impurity ion (nn R s 3+ -F i - ). The second one, at 102 k, is due to the presence of small aggregates of dipoles (like a dimer). The last band, at 360 k is due to the formation of Large Clusters. The continuous distribution model gave the best fit for these bands with mean activation energies of 0.41 eV, 0.595 eV and 1.02 eV for the first, second and third band respectively. Thermal treatments can modify the number of dipoles, dimers and clusters present in the crystal. The variation in the areas under each band can be used to measure this effect. In this work we used thermal treatments between 15 minutes and 10 hours and temperatures between 200 deg C and 500 deg C. For thermal treatments at 300 deg C, the dipoles and dimers are created and the clusters are destroyed as the time of thermal treatment increases. At 400 deg C the clusters are created and the dipoles and dimers and 350 deg C for the clusters. (author)

  18. Oxygenation measurement by multi-wavelength oxygen-dependent phosphorescence and delayed fluorescence: catchment depth and application in intact heart

    Balestra, Gianmarco M.; Aalders, Maurice C. G.; Specht, Patricia A. C.; Ince, Can; Mik, Egbert G.

    2015-01-01

    Oxygen delivery and metabolism represent key factors for organ function in health and disease. We describe the optical key characteristics of a technique to comprehensively measure oxygen tension (PO(2)) in myocardium, using oxygen-dependent quenching of phosphorescence and delayed fluorescence of

  19. Limits to the resolution of beam size measurement from fluorescent screens due to the thickness of the phosphor

    Johnson, C.D.

    1988-01-01

    This paper discusses the use of fluorescent screens for the measurement of beam profiles on non-circulating particle beams. An expression for the intensity of the beam profile as a function of phosphor thickness is given. 3 refs., 8 figs

  20. Designing and making of a tool used for measurements by X fluorescence using HgI2 detectors

    Liu-Xu, X.

    1994-10-01

    A new measuring apparatus by X fluorescence based on a HgI 2 detector, operating at room temperature is presented. The principal properties of HgI 2 are outlined. A computer code designed for this apparatus is developed. Some experimental results are given to illustrate the performances of the device. (author). 67 refs., 117 figs., 7 tabs

  1. Measurement of the fluorescence of crop residues: A tool for controlling soil erosion

    Daughtry, C. S. T.; Mcmurtrey, J. E., III; Chappelle, E. W.; Hunter, W. J.

    1994-01-01

    Management of crop residues, the portion of a crop left in the field after harvest, is an important conservation practice for minimizing soil erosion and for improving water quality. Quantification of crop residue cover is required to evaluate the effectiveness of conservation tillage practices. Methods are needed to quantify residue cover that are rapid, accurate, and objective. The fluorescence of crop residue was found to be a broadband phenomenon with emission maxima at 420 to 495 nm for excitations of 350 to 420 nm. Soils had low intensity broadband emissions over the 400 to 690 nm region for excitations of 300 to 600 nm. The range of relative fluorescence intensities for the crop residues was much greater than the fluorescence observed of the soils. As the crop residues decompose their blue fluorescence values approach the fluorescence of the soil. Fluorescence techniques are concluded to be less ambiguous and better suited for discriminating crop residues and soils than reflectance methods. If properly implemented, fluorescence techniques can be used to quantify, not only crop residue cover, but also photosynthetic efficiency in the field.

  2. A method for the measurement of in line pistachio aflatoxin concentration based on the laser induced fluorescence spectroscopy

    Paghaleh, Soodeh Jamali; Askari, Hassan Ranjbar; Marashi, Seyed Mohammad Bagher; Rahimi, Mojtaba; Bahrampour, Ali Reza

    2015-01-01

    Contamination of pistachio nuts with aflatoxin is one of the most significant issues related to pistachio health and expert. A fast pistachio aflatoxin concentration measurement method based on the laser induced fluorescence spectroscopy (LIFS) is proposed. The proposed method from theoretical and experimental points of view is analyzed. In our experiments XeCl Excimer laser is employed as an Ultra Violet (UV) source (λ=308 nm) and a UV–visible (UV–vis) spectrometer is used for fluorescent emission detection. Our setup is employed to measure the concentration of different type of Aflatoxins in pistachio nuts. Measurements results obtained by the LIFS method are compared with those are measured by the standard HPLC method. Aflatoxins concentrations are in good agreement with those are obtained by the HPLC method. The proposed laser induced fluorescence spectroscopy can be used as an in line aflatoxins concentrations measurement instrument for industrial applications. - Highlights: • XeCl Excimer laser is employed as an UV source for measurement of AFs in pistachio nuts. • Results are compared with those are measured by the standard HPLC method. • LIFS is an online AFs concentration measurement method for industrial applications

  3. Combined fluorescence-Raman spectroscopy measurements with an optical fiber probe for the diagnosis of melanocytic lesions

    Cosci, Alessandro; Cicchi, Riccardo; Rossari, Susanna; De Giorgi, Vincenzo; Massi, Daniela; Pavone, Francesco S.

    2012-02-01

    We have designed and developed an optical fiber-probe for spectroscopic measurements on human tissues. The experimental setup combines fluorescence spectroscopy and Raman spectroscopy in a multidimensional approach. Concerning fluorescence spectroscopy, the excitation is provided by two laser diodes, one emitting in the UV (378 nm) and the other emitting in the visible (445 nm). These two lasers are used to selectively excite fluorescence from NADH and FAD, which are among the brightest endogenous fluorophores in human tissues. For Raman and NIR spectroscopy, the excitation is provided by a third laser diode with 785 nm excitation wavelength. Laser light is delivered to the tissue through the central optical fiber of a fiber bundle. The surrounding 48 fibers of the bundle are used for collecting fluorescence and Raman and for delivering light to the spectrograph. Fluorescence and Raman spectra are acquired on a cooled CCD camera. The instrument has been tested on fresh human skin biopsies clinically diagnosed as malignant melanoma, melanocytic nevus, or healthy skin, finding an optimal correlation with the subsequent histological exam. In some cases our examination was not in agreement with the clinical observation, but it was with the histological exam, demonstrating that the system can potentially contribute to improve clinical diagnostic capabilities and hence reduce the number of unnecessary biopsies.

  4. A Low-Cost Fluorescent Sensor for pCO2 Measurements

    Xudong Ge

    2014-04-01

    Full Text Available Global warming is believed to be caused by increasing amounts of greenhouse gases (mostly CO2 discharged into the environment by human activity. In addition to an increase in environmental temperature, an increased CO2 level has also led to ocean acidification. Ocean acidification and rising temperatures have disrupted the water’s ecological balance, killing off some plant and animal species, while encouraging the overgrowth of others. To minimize the effect of global warming on local ecosystem, there is a strong need to implement ocean observing systems to monitor the effects of anthropogenic CO2 and the impacts thereof on ocean biological productivity. Here, we describe the development of a low-cost fluorescent sensor for pCO2 measurements. The detector was exclusively assembled with low-cost optics and electronics, so that it would be affordable enough to be deployed in great numbers. The system has several novel features, such as an ideal 90° separation between excitation and emission, a beam combiner, a reference photodetector, etc. Initial tests showed that the system was stable and could achieve a high resolution despite the low cost.

  5. Non-invasive tryptophan fluorescence measurements as a novel method of grading cataract

    Erichsen, Jesper Høiberg; Mensah, Aurore; Kessel, Line

    2017-01-01

    . All cataracts were age-related. Lens material from 16 eyes of 14 patients was included in the study. Cataracts were preoperatively graded in categories 1, 2 and 3. No lenses were category 4. For nuclear cataracts mean values of F-factor were 52.9 (SD 12.2), 61.7 (SD 5.3) and 75.7 (SD 8.9......) for categories 1, 2 and 3 respectively. Linear regression on F-factor as a function of preoperative grading category showed increasing values of F-factor with increasing preoperative grading category, R2 = 0.515. Our experiment showed that preoperative optical grading of cataracts by Scheimpflug imaging may......Development of non-invasive treatments for cataract calls for a sensitive diagnostic assay. We conducted a study to test whether the ratio of folded tryptophan to non-tryptophan fluorescence emission (F-factor) may be used for grading cataracts in human lenses. The F-factor was measured...

  6. Characterization of a pulsed x-ray source for fluorescent lifetime measurements

    Blankespoor, S.C.; Derenzo, S.E.; Moses, W.W.; Rossington, C.S.; Ito, M.; Oba, K.

    1994-01-01

    To search for new, fast, inorganic scintillators, the authors have developed a bench-top pulsed x-ray source for determining fluorescent lifetimes and wavelengths of compounds in crystal or powdered form. This source uses a light-excited x-ray tube which produces x-rays when light from a laser diode strikes its photocathode. The x-ray tube has a tungsten anode, a beryllium exit window, a 30 kV maximum tube bias, and a 50 μA maximum average cathode current. The laser produces 3 x 10 7 photons at 650 nm per ∼100 ps pulse, with up to 10 7 pulses/sec. The time spread for the laser diode, x-ray tube, and a microchannel plate photomultiplier tube is less than 120 ps fwhm. The mean x-ray energy at tube biases of 20, 25, and 30 kV is 9.4, 10.3, and 11.1 keV, respectively. The authors measured 140, 230, and 330 x-ray photons per laser diode pulse per steradian, at tube biases of 20, 25, and 30 kV, respectively. Background x-rays due to dark current occur at a rate of 1 x 10 6 and 3 x 10 6 photons/sec/steradian at biases of 25 and 30 kV, respectively. Data characterizing the x-ray output with an aluminum filter in the x-ray beam are also presented

  7. Behaviour of atomic oxygen in a pulsed dielectric barrier discharge measured by laser-induced fluorescence

    Ono, Ryo [High Temperature Plasma Center, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 227-8568 (Japan); Yamashita, Youta [Department of Electrical Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656 (Japan); Takezawa, Kei [Department of Electrical Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656 (Japan); Oda, Tetsuji [Department of Electrical Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656 (Japan)

    2005-08-21

    Atomic oxygen is measured in a pulsed dielectric barrier discharge (DBD) using two-photon absorption laser-induced fluorescence (TALIF). The ground-level atomic oxygen is excited to the 3p {sup 3}P state by two-photon absorption at 226 nm. Negative (-40 kV) or positive (+30 kV) pulsed DBD occurs in an O{sub 2}-N{sub 2} mixture at atmospheric pressure. The pulse width of the DBD current is approximately 50 ns. The TALIF experiment shows that the decay rate of atomic oxygen increases linearly with O{sub 2} concentration. This result proves that atomic oxygen decays mainly by the third-body reaction, O + O{sub 2} + M {yields} O{sub 3} + M. The rate coefficient of the third-body reaction is estimated to be 2.2 x 10{sup -34} cm{sup 6} s{sup -1} in the negative DBD and 0.89 x 10{sup -34} cm{sup 6} s{sup -1} in the positive DBD. It is shown that the decay rate of atomic oxygen increases linearly with humidity. This can explain the well-known fact that ozone production in DBD is suppressed by increasing humidity.

  8. Behaviour of atomic oxygen in a pulsed dielectric barrier discharge measured by laser-induced fluorescence

    Ono, Ryo; Yamashita, Youta; Takezawa, Kei; Oda, Tetsuji

    2005-01-01

    Atomic oxygen is measured in a pulsed dielectric barrier discharge (DBD) using two-photon absorption laser-induced fluorescence (TALIF). The ground-level atomic oxygen is excited to the 3p 3 P state by two-photon absorption at 226 nm. Negative (-40 kV) or positive (+30 kV) pulsed DBD occurs in an O 2 -N 2 mixture at atmospheric pressure. The pulse width of the DBD current is approximately 50 ns. The TALIF experiment shows that the decay rate of atomic oxygen increases linearly with O 2 concentration. This result proves that atomic oxygen decays mainly by the third-body reaction, O + O 2 + M → O 3 + M. The rate coefficient of the third-body reaction is estimated to be 2.2 x 10 -34 cm 6 s -1 in the negative DBD and 0.89 x 10 -34 cm 6 s -1 in the positive DBD. It is shown that the decay rate of atomic oxygen increases linearly with humidity. This can explain the well-known fact that ozone production in DBD is suppressed by increasing humidity

  9. Three-dimensional laser-induced fluorescence measurements of turbulent chemical plumes

    True, Aaron; Crimaldi, John

    2017-11-01

    In order to find prey, mates, and suitable habitat, many organisms must navigate through complex chemical plume structures in turbulent flow environments. In this context, we investigate the spatial and temporal structure of chemical plumes released isokinetically into fractal-grid-generated turbulence in an open channel flow. We first utilized particle image velocimetry (PIV) to characterize flow conditions (mean free stream velocities, turbulence intensities, turbulent kinetic energy dissipation rates, Taylor Reynolds numbers). We then implemented a newly developed high-resolution, high-speed, volumetric scanning laser-induced fluorescence (LIF) system for near time-resolved measurements of three-dimensional chemical plume structures. We investigated cases with and without a cylinder wake, and compare statistical (mean, variance, intermittency, probability density functions) and spectral (power spectrum of concentration fluctuations) characteristics of the chemical plume structure. Stretching and folding of complex three-dimensional filament structures during chaotic turbulent mixing is greatly enhanced in the cylinder wake case. In future experiments, we will implement simultaneous PIV and LIF, enabling computation of the covariance of the velocity and chemical concentration fluctuations and thus estimation of turbulent eddy diffusivities. NSF PHY 1555862.

  10. Single track coincidence measurements of fluorescent and plastic nuclear track detectors in therapeutic carbon beams

    Osinga, J-M; Jäkel, O; Ambrožová, I; Brabcová, K Pachnerová; Davídková, M; Akselrod, M S; Greilich, S

    2014-01-01

    In this paper we present a method for single track coincidence measurements using two different track detector materials. We employed plastic and fluorescent nuclear track detectors (PNTDs and FNTDs) in the entrance channel of a monoenergetic carbon ion beam covering the therapeutic energy range from 80 to 425 MeV/u. About 99% of all primary particle tracks detected by both detectors were successfully matched, while 1% of the particles were only detected by the FNTDs because of their superior spatial resolution. We conclude that both PNTDs and FNTDs are suitable for clinical carbon beam dosimetry with a detection efficiency of at least 98.82% and 99.83% respectively, if irradiations are performed with low fluence in the entrance channel of the ion beam. The investigated method can be adapted to other nuclear track detectors and offers the possibility to characterize new track detector materials against well-known detectors. Further, by combining two detectors with a restricted working range in the presented way a hybrid-detector system can be created with an extended and optimized working range

  11. A dark green fluorescent protein as an acceptor for measurement of Förster resonance energy transfer.

    Murakoshi, Hideji; Shibata, Akihiro C E; Nakahata, Yoshihisa; Nabekura, Junichi

    2015-10-15

    Measurement of Förster resonance energy transfer by fluorescence lifetime imaging microscopy (FLIM-FRET) is a powerful method for visualization of intracellular signaling activities such as protein-protein interactions and conformational changes of proteins. Here, we developed a dark green fluorescent protein (ShadowG) that can serve as an acceptor for FLIM-FRET. ShadowG is spectrally similar to monomeric enhanced green fluorescent protein (mEGFP) and has a 120-fold smaller quantum yield. When FRET from mEGFP to ShadowG was measured using an mEGFP-ShadowG tandem construct with 2-photon FLIM-FRET, we observed a strong FRET signal with low cell-to-cell variability. Furthermore, ShadowG was applied to a single-molecule FRET sensor to monitor a conformational change of CaMKII and of the light oxygen voltage (LOV) domain in HeLa cells. These sensors showed reduced cell-to-cell variability of both the basal fluorescence lifetime and response signal. In contrast to mCherry- or dark-YFP-based sensors, our sensor allowed for precise measurement of individual cell responses. When ShadowG was applied to a separate-type Ras FRET sensor, it showed a greater response signal than did the mCherry-based sensor. Furthermore, Ras activation and translocation of its effector ERK2 into the nucleus could be observed simultaneously. Thus, ShadowG is a promising FLIM-FRET acceptor.

  12. Temperature and humidity dependence of air fluorescence yield measured by AIRFLY

    Ave, M.; Bohacova, M.; Buonomo, B.; Busca, N.; Cazon, L.; Chemerisov, S.D.; Conde, M.E.; Crowell, R.A.; Di Carlo, P.; Di Giulio, C.; Doubrava, M.; Esposito, A.; Facal, P.; Franchini, F.J.; Hoerandel, J.; Hrabovsky, M.; Iarlori, M.; Kasprzyk, T.E.; Keilhauer, B.

    2008-01-01

    The fluorescence detection of ultra high energy cosmic rays requires a detailed knowledge of the fluorescence light emission from nitrogen molecules over a wide range of atmospheric parameters, corresponding to altitudes typical of the cosmic ray shower development in the atmosphere. We have studied the temperature and humidity dependence of the fluorescence light spectrum excited by MeV electrons in air. Results for the 313.6, 337.1, 353.7 and 391.4 nm bands are reported in this paper. We found that the temperature and humidity dependence of the quenching process changes the fluorescence yield by a sizeable amount (up to 20% for the temperature dependence in the 391.4 nm band) and its effect must be included for a precise estimation of the energy of ultra high energy cosmic rays.

  13. Laser-Induced Fluorescence Measurements within a Laboratory Hall Thruster (Postprint)

    Hargus, Jr., W. A; Cappelli, M. A

    1999-01-01

    In this paper, we describe the results of a study of laser induced fluorescence velocimetry of ionic xenon in the plume and interior acceleration channel of a laboratory Hall type thruster operating...

  14. Measurements of KrF laser-induced O2 fluorescence in high-temperature atmospheric air

    Grinstead, Jay H.; Laufer, Gabriel; Mcdaniel, James C., Jr.

    1993-01-01

    Conditions for obtaining laser-induced O2 fluorescence using a tunable KrF laser has been determined theoretically and experimentally. With this laser source, O2 rotational temperature measurement is possible even in the absence of vibrational equilibrium. Temperature measurement using a two-line excitation scheme has been demonstrated in a high-temperature atmospheric-air furnace. A measurement uncertainty of 10.7 percent for the temperature range 1325-1725 K was realized. At atmospheric pressure, O2 LIF measurements are possible for air temperatures above 1250 K. Interference from OH fluorescence in reacting flows can be avoided by the proper selection of O2 transitions. Depletion of the ground state population by the incident laser is negligible for intensities below 7.5 x 10 to the 6th W/sq cm/per cm.

  15. Spreading depolarizations increase delayed brain injury in a rat model of subarachnoid hemorrhage

    Hamming, Arend M.; Wermer, Marieke J. H.; Rudrapatna, S. Umesh; Lanier, Christian; van Os, Hine J. A.; van den Bergh, Walter M.; Ferrari, Michel D.; van der Toorn, Annette; van den Maagdenberg, Arn M. J. M.; Stowe, Ann M.; Dijkhuizen, Rick M.

    Spreading depolarizations may contribute to delayed cerebral ischemia after aneurysmal subarachnoid hemorrhage, but the effect of spreading depolarizations on brain lesion progression after subarachnoid hemorrhage has not yet been assessed directly. Therefore, we tested the hypothesis that

  16. Laser-saturated fluorescence of nitric oxide and chemiluminescence measurements in premixed ethanol flames

    Marques, Carla S.T.; Barreta, Luiz G.; Sbampato, Maria E.; dos Santos, Alberto M. [Aerothermodynamic and Hypersonic Division, Institute of Advanced Studies - General Command of Aerospatial Technology, Rodovia dos Tamoios, km 5.5, 12228-001 Sao Jose dos Campos - SP (Brazil)

    2010-11-15

    In this study, nitric oxide laser-saturated fluorescence (LSF) measurements were acquired from premixed ethanol flames at atmospheric pressure in a burner. NO-LSF experimental profiles for fuel-rich premixed ethanol flames ({phi} = 1.34 and {phi} = 1.66) were determined through the excitation/detection scheme of the Q{sub 2}(26.5) rotational line in the A{sup 2}{sigma}{sup +} - X{sup 2}{pi} (0,0) vibronic band and {gamma}(0,1) emission band. A calibration procedure by NO doping into the flame was applied to establish the NO concentration profiles in these flames. Chemiluminescent emission measurements in the (0, 0) vibronic emission bands of the OH{sup *} (A{sup 2}{sigma}{sup +} - X{sup 2}{pi}) and CH{sup *}(A{sup 2}{delta} - X{sup 2}{pi}) radicals were also obtained with high spatial and spectral resolution for fuel-rich premixed ethanol flames to correlate them with NO concentrations. Experimental chemiluminescence profiles and the ratios of the integrated areas under emission spectra (A{sub CH*}/A{sub CH*}(max.) and A{sub CH*}/A{sub OH*}) were determined. The relationships between chemiluminescence and NO concentrations were established along the premixed ethanol flames. There was a strong connection between CH{sup *} radical chemiluminescence and NO formation and the prompt-NO was identified as the governing mechanism for NO production. The results suggest the optimum ratio of the chemiluminescence of two radicals (A{sub CH*}/A{sub OH*}) for NO diagnostic purposes. (author)

  17. Fluorescence-based rapid measurement of sphingosine-1-phosphate transport activity in erythrocytes[S

    Kobayashi, Naoki; Otsuka, Masato; Yamaguchi, Akihito; Nishi, Tsuyoshi

    2016-01-01

    Sphingosine-1-phosphate (S1P) is present in the blood plasma and acts as a pivotal intercellular signal transmitter in the immune system by recruiting lymphocytes from the thymus and secondary lymphoid tissues. The plasma S1P concentration is maintained by the supply of S1P from erythrocytes. Previously, we showed that S1P release from erythrocytes is mediated by an ATP-dependent transporter. In this study, we attempted to establish a rapid and reliable method for measuring the S1P transport activity in erythrocytes by using a fluorescent S1P analog, 7-nitro-2-1,3-benzoxadiazol-4-yl (NBD)-labeled S1P. NBD-S1P was released from erythrocytes in a time-dependent manner. The NBD-S1P release was reduced after exposure to glyburide, which is an inhibitor of the S1P transporter in erythrocytes. Moreover, the release of NBD-S1P and S1P from erythrocytes was competitively inhibited by intracellular S1P and NBD-S1P, respectively. These results showed that the erythrocyte S1P transporter exports NBD-S1P. We optimized the sample-preparation conditions and lipid extraction to increase the sensitivity of the assay. Furthermore, we successfully measured NBD-S1P release without lipid extraction by decreasing the concentration of BSA in the assay buffer to 0.1%. This method will be useful for the high-throughput screening of S1P transporter inhibitors using conventional fluorometers. PMID:27655910

  18. A New System for Measuring Auto-Fluorescence Changes in Neovascular-AMD after Intravitreal Injection of Bavecizumab

    Mohammad Norouzifard; Ali Soleymani; Jamshid Shanbehzadeh

    2011-01-01

    Age-Related Macular Degeneration (AMD) is the second disease diabetes which causes blindness in aged people. The only remedy for AMD is intravenous injection of bavecizumab. To prove the efficiency of remedy, the degenerated cells in Macula should be measured. In this article, a modern system is introduced to measure Auto-Fluorescence in Macula part of retina in order to obtain number of degenerated cells. The system consists of three main parts: Pre-processing stage is omission of margins an...

  19. Dynamic Measurement of Tumor Vascular Permeability and Perfusion using a Hybrid System for Simultaneous Magnetic Resonance and Fluorescence Imaging.

    Ren, Wuwei; Elmer, Andreas; Buehlmann, David; Augath, Mark-Aurel; Vats, Divya; Ripoll, Jorge; Rudin, Markus

    2016-04-01

    Assessing tumor vascular features including permeability and perfusion is essential for diagnostic and therapeutic purposes. The aim of this study was to compare fluorescence and magnetic resonance imaging (MRI)-based vascular readouts in subcutaneously implanted tumors in mice by simultaneous dynamic measurement of tracer uptake using a hybrid fluorescence molecular tomography (FMT)/MRI system. Vascular permeability was measured using a mixture of extravascular imaging agents, GdDOTA and the dye Cy5.5, and perfusion using a mixture of intravascular agents, Endorem and a fluorescent probe (Angiosense). Dynamic fluorescence reflectance imaging (dFRI) was integrated into the hybrid system for high temporal resolution. Excellent correspondence between uptake curves of Cy5.5/GdDOTA and Endorem/Angiosense has been found with correlation coefficients R > 0.98. The two modalities revealed good agreement regarding permeability coefficients and centers-of-gravity of the imaging agent distribution. The FMT/dFRI protocol presented is able to accurately map physiological processes and poses an attractive alternative to MRI for characterizing tumor neoangiogenesis.

  20. Two decades of water vapor measurements with the FISH fluorescence hygrometer: a review

    J. Meyer

    2015-07-01

    Full Text Available For almost two decades, the airborne Fast In-situ Stratospheric Hygrometer (FISH has stood for accurate and precise measurements of total water mixing ratios (WMR, gas phase + evaporated ice in the upper troposphere and lower stratosphere (UT/LS. Here, we present a comprehensive review of the measurement technique (Lyman-α photofragment fluorescence, calibration procedure, accuracy and reliability of FISH. Crucial for FISH measurement quality is the regular calibration to a water vapor reference, namely the commercial frost-point hygrometer DP30. In the frame of this work this frost-point hygrometer is compared to German and British traceable metrological water standards and its accuracy is found to be 2–4 %. Overall, in the range from 4 to 1000 ppmv, the total accuracy of FISH was found to be 6–8 %, as stated in previous publications. For lower mixing ratios down to 1 ppmv, the uncertainty reaches a lower limit of 0.3 ppmv. For specific, non-atmospheric conditions, as set in experiments at the AIDA chamber – namely mixing ratios below 10 and above 100 ppmv in combination with high- and low-pressure conditions – the need to apply a modified FISH calibration evaluation has been identified. The new evaluation improves the agreement of FISH with other hygrometers to ± 10 % accuracy in the respective mixing ratio ranges. Furthermore, a quality check procedure for high total water measurements in cirrus clouds at high pressures (400–500 hPa is introduced. The performance of FISH in the field is assessed by reviewing intercomparisons of FISH water vapor data with other in situ and remote sensing hygrometers over the last two decades. We find that the agreement of FISH with the other hygrometers has improved over that time span from overall up to ± 30 % or more to about ± 5–20 % @ 10 ppmv. As presented here, the robust and continuous calibration and operation procedures of the FISH instrument over the last two decades establish the

  1. Mechanisms of ultrafast fluorescence depletion spectroscopy and applications to measure slovation dynamics of coummarin 153 in methanol

    Yang Songqiu; Liu Jianyong; Zhou Panwang; Chen Junsheng; Han Keli; He Guozhong

    2012-01-01

    Subpicosecond fluorescence depletion spectroscopy (FDS) was used to measure the solvation dynamics of coumarin 153 (C153) in methanol. The FDS mechanisms were discussed. A quasi-continuous model was used to describe the solvational relaxation of excited states. The perturbations of the probe pulse on the excited sample system, including up-conversion and stimulated emission, were sufficiently discussed. For a probe molecule used in the FDS experiment, ensuring that the up-conversion perturbation can be negligible is important. FDS was found to be a good technique for measuring the solvation dynamics of C153 in methanol. - Highlights: ► Mechanisms of subpicosecond fluorescence depletion spectroscopy. ► Quasi-continuous model was used to describe the solvational relaxation. ► The solvation dynamics of coumarin 153 in methanol has been measured.

  2. Healthy Dietary Patterns and Oxidative Stress as Measured by Fluorescent Oxidation Products in Nurses’ Health Study

    Seungyoun Jung

    2016-09-01

    Full Text Available Healthy diets may lower oxidative stress and risk of chronic diseases. However, no previous studies examined associations between diet and fluorescent oxidation products (FlOP, a global marker of oxidative stress. We evaluated associations between healthy eating patterns (Alternative Healthy Eating Index (AHEI, Dietary Approach to Stop Hypertension (DASH, and Alternate Mediterranean Diet (aMED and FlOP, measured at three excitation/emission wavelengths (FlOP_360, FlOP_320, FlOP_400 from 2021 blood samples collected from 1688 women within the Nurses’ Health Study. AHEI, DASH, and aMED scores were significantly positively associated with FlOP_360 and FlOP_320 concentrations (p-trend ≤ 0.04, but not associated with FlOP_400. Among specific food groups that contribute to these diet scores, significantly positive associations were observed with legumes and vegetables for FlOP_360, vegetables and fruits for FlOP_320, and legumes and alcohol for FlOP_400. Inverse associations were observed with nuts, sweets or desserts, and olive oil for FlOP_360, nuts for FlOP_320 and sweets or desserts for FlOP_400 (all p-trend ≤ 0.05. However, FlOP variation due to diet was small compared to overall FlOP variation. In conclusion, AHEI, DASH, and aMED scores were unexpectedly positively, but weakly, associated with FlOP_360 and FlOP_320. However, these findings should be interpreted cautiously as the determinants of FlOP concentrations are not fully understood.

  3. Healthy Dietary Patterns and Oxidative Stress as Measured by Fluorescent Oxidation Products in Nurses' Health Study.

    Jung, Seungyoun; Smith-Warner, Stephanie A; Willett, Walter C; Wang, Molin; Wu, Tianying; Jensen, Majken; Hankinson, Susan E; Eliassen, A Heather

    2016-09-21

    Healthy diets may lower oxidative stress and risk of chronic diseases. However, no previous studies examined associations between diet and fluorescent oxidation products (FlOP), a global marker of oxidative stress. We evaluated associations between healthy eating patterns (Alternative Healthy Eating Index (AHEI), Dietary Approach to Stop Hypertension (DASH), and Alternate Mediterranean Diet (aMED)) and FlOP, measured at three excitation/emission wavelengths (FlOP_360, FlOP_320, FlOP_400) from 2021 blood samples collected from 1688 women within the Nurses' Health Study. AHEI, DASH, and aMED scores were significantly positively associated with FlOP_360 and FlOP_320 concentrations ( p -trend ≤ 0.04), but not associated with FlOP_400. Among specific food groups that contribute to these diet scores, significantly positive associations were observed with legumes and vegetables for FlOP_360, vegetables and fruits for FlOP_320, and legumes and alcohol for FlOP_400. Inverse associations were observed with nuts, sweets or desserts, and olive oil for FlOP_360, nuts for FlOP_320 and sweets or desserts for FlOP_400 (all p -trend ≤ 0.05). However, FlOP variation due to diet was small compared to overall FlOP variation. In conclusion, AHEI, DASH, and aMED scores were unexpectedly positively, but weakly, associated with FlOP_360 and FlOP_320. However, these findings should be interpreted cautiously as the determinants of FlOP concentrations are not fully understood.

  4. Effects of amiodarone therapy on thyroid iodine content as measured by x-ray fluorescence

    Fragu, P.; Schlumberger, M.; Davy, J.M.; Slama, M.; Berdeaux, A.

    1988-01-01

    Thyroid iodine content (TIC) was measured by x-ray fluorescence in 68 patients who had received amiodarone treatment for varying intervals (1 g/week for 1-120 months). Thirty-six patients were euthyroid; the mean TIC of the patients (n = 15), who had been treated for less than 12 months was 30 +/- 19 (+/- SD) mg, twice the normal mean value (14.6 +/- 5.0 mg), and it was 39 +/- 17 mg in those (n = 16) who had been treated for 12-60 months and 29 +/- 6 mg in those (n = 5) who had been treated longer (greater than 60 months). Nineteen patients were hyperthyroid and had elevated TIC values. Of them, 6 patients had a goiter; their TIC (50 +/- 19 mg) was not significantly different from that of the hyperthyroid patients with no goiter (55 +/- 29 mg), but they became hyperthyroid more rapidly. Thirteen patients were hypothyroid; none had TIC values above the normal range, and it was below 2.5 mg in 5 patients. A sequential study was undertaken in 11 euthyroid patients who had no detectable antithyroid antibodies. TIC did not increase during treatment in 2 patients; both developed hypothyroidism, which was transient in 1 despite continuation of amiodarone treatment. The TIC initially increased during amiodarone treatment in the other 9 patients, leveling off at the end of the first year. The TIC rose well above the upper limit of the normal range in 4 patients, of whom 2 became hyperthyroid during the second year of treatment. TIC remained within the normal range in the other 5 patients, of whom 3 became hypothyroid after 12-24 months of treatment (1 subclinical, 2 overt). Although the TIC was significantly higher in the patients with hyperthyroidism than in the patients who remained euthyroid, the TIC test cannot be used to predict the occurrence of hyperthyroidism

  5. Near-infrared II fluorescence for imaging hindlimb vessel regeneration with dynamic tissue perfusion measurement.

    Hong, Guosong; Lee, Jerry C; Jha, Arshi; Diao, Shuo; Nakayama, Karina H; Hou, Luqia; Doyle, Timothy C; Robinson, Joshua T; Antaris, Alexander L; Dai, Hongjie; Cooke, John P; Huang, Ngan F

    2014-05-01

    Real-time vascular imaging that provides both anatomic and hemodynamic information could greatly facilitate the diagnosis of vascular diseases and provide accurate assessment of therapeutic effects. Here, we have developed a novel fluorescence-based all-optical method, named near-infrared II (NIR-II) fluorescence imaging, to image murine hindlimb vasculature and blood flow in an experimental model of peripheral arterial disease, by exploiting fluorescence in the NIR-II region (1000-1400 nm) of photon wavelengths. Because of the reduced photon scattering of NIR-II fluorescence compared with traditional NIR fluorescence imaging and thus much deeper penetration depth into the body, we demonstrated that the mouse hindlimb vasculature could be imaged with higher spatial resolution than in vivo microscopic computed tomography. Furthermore, imaging during 26 days revealed a significant increase in hindlimb microvascular density in response to experimentally induced ischemia within the first 8 days of the surgery (Pimaging make it a useful imaging tool for murine models of vascular disease. © 2014 American Heart Association, Inc.

  6. Spreading depolarizations occur in human ischemic stroke with high incidence

    Dohmen, C.; Sakowitz, O.W.; Fabricius, M.

    2008-01-01

    Objective: Cortical spreading depression (CSD) and periinfarct depolarization (PID) have been shown in various experimental models of stroke to cause secondary neuronal damage and infarct expansion. For decades it has been questioned whether CSD or PID occur in human ischemic stroke. Here, we...... potential change spreading between adjacent channels was accompanied by transient depression of ECoG activity. In PID, a slow potential change spread between neighboring channels despite already established suppression of ECoG activity. Most CSDs and PIDs appeared repetitively in clusters. CSD or PID...... was observed in all but two patients. In these two patients, the electrode strip had been placed over infarcted tissue, and accordingly, no local ECoG or recurrent transient depolarization activity occurred throughout the observation period. Interpretation: CSD and PID occurred spontaneously with high...

  7. Linear theory of beam depolarization due to vertical betatron motion

    Chao, A.W.; Schwitters, R.F.

    1976-06-01

    It is well known that vertical betatron motion in the presence of quantum fluctuations leads to some degree of depolarization of a transversely polarized beam in electron-positron storage rings even for energies away from spin resonances. Analytic formulations of this problem, which require the use of simplifying assumptions, generally have shown that there exist operating energies where typical storage rings should exhibit significant beam polarization. Due to the importance of beam polarization in many experiments, we present here a complete calculation of the depolarization rate to lowest order in the perturbing fields, which are taken to be linear functions of the betatron motion about the equilibrium orbit. The results are applicable to most high energy storage rings. Explicit calculations are given for SPEAR and PEP. 7 refs., 8 figs

  8. Permissive effect of dexamethasone on the increase of proenkephalin mRNA induced by depolarization of chromaffin cells

    Naranjo, J.R.; Mocchetti, I.; Schwartz, J.P.; Costa, E.

    1986-01-01

    In cultured bovine chromaffin cells, changes in the dynamic state of enkephalin stores elicited experimentally were studied by measuring cellular proenkephalin mRNA, as well as enkephalin precursors and authentic enkephalin content of cells and culture media. In parallel, tyrosine hydroxylase mRNA and catecholamine cell content were also determined. Low concentrations (0.5-100 pM) of dexamethasone increased the cell contents of proenkephalin mRNA and enkephalin-containing peptides. High concentrations of the hormone(1 μM) were required to increase the cell contents of tyrosine hydroxylase mRNA and catecholamines. Depolarization of the cells with 10 μM veratridine resulted in a depletion of enkephalin and catecholamine stores after 24 hr. The enkephalin, but not the catecholamine, content was restored by 48 hr. An increase in proenkephalin mRNA content might account for the recovery; this increase was curtailed by tetrodotoxin and enhanced by 10 pM dexamethasone. Tyrosine hydroxylase mRNA content was not significantly modified by depolarization, even in the presence of 1 μM dexamethasone. Aldosterone, progesterone, testosterone, or estradiol (1 μM) failed to change proenkephalin mRNA. Hence, dexamethasone appears to exert a specific permissive action on the stimulation of the proenkephalin gene elicited by depolarization. Though the catecholamines and enkephalins are localized in the same chromaffin granules and are coreleased by depolarization, the genes coding for the processes that are rate limiting in the production of these neuromodulators can be differentially regulated

  9. Time-resolved fluorescence measurements using microlens array and area imaging devices.

    Merk, Susanne; Lietz, Achim; Kroner, Margareta; Valler, Martin; Heilker, Ralf

    2004-02-01

    Time-resolved fluorescence (TRF) assay formats are frequently used technologies in high-throughput screening. In this article, we have characterised the novel Plate::Vision(2) 96-microlens array reader (Carl Zeiss Jena GmbH, Germany) and compared it to the novel LEADseeker Generation IV multimodality imaging system (LEADseeker Gen IV; Amersham Biosciences UK Ltd., UK) for applications in the TRF mode. In europium measurements using the TRF mode, the Plate::Vision displayed a limit of detection for europium of approximately 3 pM, which was comparable to two established TRF readers, the Discovery and the Victor V (both PerkinElmer Life Sciences Inc., USA). The LEADseeker's limit of detection only extended down to europium concentrations of approximately 10 pM in these experiments. For TRF resonance energy transfer (TR-FRET) experiments, a europium-biotin (Eu-biotin) conjugate was titrated with a streptavidin-allophycocyanin (SA-APC) conjugate. The Plate::Vision produced Z' values larger than 0.5 for the acceptor fluorophor emission with concentrations of Eu-biotin as low as 3 nM combined with 175 pM SA-APC. To achieve Z' values of at least 0.5 with the LEADseeker, concentrations of 10 nM Eu-biotin combined with SA-APC of at least 0.8 nM were required. In a drug screening application using TR-FRET, the energy transfer from a europium-labelled protein X (Eu-protein X) to a complex of biotinylated peptide Y with SA-APC was measured. Using the Plate::Vision, a Z' factor larger than 0.5 for the acceptor fluorophor emission was only obtained for a Eu-protein X concentration of at least 10 nM in combination with biotinylated peptide Y/SA-APC at saturating concentrations. Both the Plate::Vision and the LEADseeker show good quality results for applications in the TRF mode and enable an increased throughput based on their shortened measurement time in comparison to classic photomultiplier tube-based readers.

  10. Piezoelectric effect in polarized and electrically depolarized ferrotextures

    Luchaninov, A.G.; Shil'nikov, A.V.; Shuvalov, L.A.

    1999-01-01

    Piezoelectric moduli were calculated for ferroelectric textures in the states with the greatest possible (in terms of symmetry) polarization and the zero polarization (obtained from the former by electrical depolarization). The calculations were performed for the textures of crystals of the classes 2, 3, 4, 6, mm2, 3m, 4mm,and 6mm. The experimental results for lead zirconate-titanate- and barium-titanate-based piezoelectric ceramic are reported

  11. Beam-beam depolarization in SPEAR and PEP

    Montague, B.W.

    1977-01-01

    In this note some approximate estimates are made of depolarization due to beam-beam forces in SPEAR and PEP, using the results of a calculation by Kondratenko. The model assumes head-on collisions between bunches of Gaussian distribution in the transverse directions; the force on the weak-beam particle is taken to be a δ-function at the interaction point. 1 ref

  12. On the polarization and depolarization of the electromagnetic waves

    Borghese, Ferdinando; Denti, Paolo; Saija, Rosalba; Cecchi-Pestellini, Cesare

    2005-01-01

    We discuss a general description of the polarization of monochromatic electromagnetic waves that proves useful when the customary description in terms of Stokes parameters does not apply. We also show how this description can be exploited to study the depolarization of linearly polarized waves in the interior of porous model cosmic dust grains. The results that we discuss may affect our understanding of several problems that are relevant for astrobiology

  13. Elastodynamic metasurface: Depolarization of mechanical waves and time effects

    Boutin, Claude, E-mail: claude.boutin@entpe.fr [Ecole Nationale des Travaux Publics de l' Etat, Université de Lyon, LGCB, UMR CNRS 5513, Vaulx-en-Velin (France); Schwan, Logan [Acoustics Research Center, University of Salford, Newton Building, Salford M5 4WT (United Kingdom); Dietz, Matthew S. [Department of Civil Engineering, University of Bristol, Queen' s Building, Bristol BS8 1TR (United Kingdom)

    2015-02-14

    We report the concept of microstructured surfaces with inner resonance in the field of elastodynamics, so-called elastodynamic metasurfaces. Such metasurfaces allow for wavefield manipulation of mechanical waves by tuning the boundary conditions at specific frequencies. In particular, they can be used to depolarize elastic waves without introducing heterogeneities in the medium itself; the physical means to do so in homogeneous elastic media used to remain, surprisingly, an open question while depolarization is commonplace in electromagnetism. The principle relies on the anisotropic behaviour of a subwavelength array of resonators: Their subwavelength configuration confines the Bragg interferences scattered by resonators into a boundary layer. The effective behaviour of the resonating array is expressed with homogenization as an unconventional impedance, the frequency-dependence, and anisotropy of which lead to depolarization and time effects. The concept of the elastodynamic metasurface is tested experimentally and results bear testament to its efficacy and robustness. Elastodynamic metasurfaces are easily realized and analytically predictable, opening new possibilities in tomography techniques, ultrasonics, geophysics, vibration control, materials and structure design.

  14. Live-cell Microscopy and Fluorescence-based Measurement of Luminal pH in Intracellular Organelles

    Li Ma

    2017-08-01

    Full Text Available Luminal pH is an important functional feature of intracellular organelles. Acidification of the lumen of organelles such as endosomes, lysosomes, and the Golgi apparatus plays a critical role in fundamental cellular processes. As such, measurement of the luminal pH of these organelles has relevance to both basic research and translational research. At the same time, accurate measurement of intraorganellar pH in living cells can be challenging and may be a limiting hurdle for research in some areas. Here, we describe three powerful methods to measure rigorously the luminal pH of different intracellular organelles, focusing on endosomes, lysosomes, and the Golgi apparatus. The described methods are based on live imaging of pH-sensitive fluorescent probes and include: (1 A protocol based on quantitative, ratiometric measurement of endocytosis of pH-sensitive and pH-insensitive fluorescent conjugates of transferrin; (2 A protocol for the use of proteins tagged with a ratiometric variant of the pH-sensitive intrinsically fluorescent protein pHluorin; and (3 A protocol using the fluorescent dye LysoSensor™. We describe necessary reagents, key procedures, and methods and equipment for data acquisition and analysis. Examples of implementation of the protocols are provided for cultured cells derived from a cancer cell line and for primary cultures of mouse hippocampal neurons. In addition, we present strengths and weaknesses of the different described intraorganellar pH measurement methods. These protocols are likely to be of benefit to many researchers, from basic scientists to those conducting translational research with a focus on diseases in patient-derived cells.

  15. Accuracy of depolarization and delay spread predictions using advanced ray-based modeling in indoor scenarios

    Mani Francesco

    2011-01-01

    Full Text Available Abstract This article investigates the prediction accuracy of an advanced deterministic propagation model in terms of channel depolarization and frequency selectivity for indoor wireless propagation. In addition to specular reflection and diffraction, the developed ray tracing tool considers penetration through dielectric blocks and/or diffuse scattering mechanisms. The sensitivity and prediction accuracy analysis is based on two measurement campaigns carried out in a warehouse and an office building. It is shown that the implementation of diffuse scattering into RT significantly increases the accuracy of the cross-polar discrimination prediction, whereas the delay-spread prediction is only marginally improved.

  16. Depolarization corrections to the coercive field in thin-film ferroelectrics

    Dawber, M; Chandra, P; Littlewood, P B; Scott, J F

    2003-01-01

    Empirically, the coercive field needed to reverse the polarization in a ferroelectric increases with decreasing film thickness. For ferroelectric films of 100 μm to 100 nm in thickness the coercive field has been successfully described by a semi-empirical scaling law. Accounting for depolarization corrections, we show that this scaling behaviour is consistent with field measurements of ultrathin ferroelectric capacitors down to one nanometre in film thickness. Our results also indicate that the minimum film thickness, determined by a polarization instability, can be tuned by the choice of electrodes, and recommendations for next-generation ferroelectric devices are discussed. (letter to the editor)

  17. Depolarization corrections to the coercive field in thin-film ferroelectrics

    Dawber, M; Littlewood, P B; Scott, J F

    2003-01-01

    Empirically, the coercive field needed to reverse the polarization in a ferroelectric increases with decreasing film thickness. For ferroelectric films of 100 mu m to 100 nm in thickness the coercive field has been successfully described by a semi-empirical scaling law. Accounting for depolarization corrections, we show that this scaling behaviour is consistent with field measurements of ultrathin ferroelectric capacitors down to one nanometre in film thickness. Our results also indicate that the minimum film thickness, determined by a polarization instability, can be tuned by the choice of electrodes, and recommendations for next-generation ferroelectric devices are discussed. (letter to the editor)

  18. A neutron depolarization study of magnetic inhomogeneities in weak-link superconductors

    Zhuchenko, N.K.; Yagud, R.Z.

    1993-01-01

    Neutron depolarization measurements in the mixed state of both high-T c and low-T c weak-link superconductors have been carried out. Samples of YBCO, BSCCO, SnMo 6 S 8 and 0.5 Nb-0.5 Ti of different magnetic prehistory were analyzed at temperatures T 4.2 K under applied magnetic fields II <= 16.5 kOe. We ascribe the appearance of magnetic inhomogeneities and their hysteresis behaviour to the interaction between dipole magnetic fields (diamagnetic and paramagnetic ones) and applied magnetic fields

  19. Magnetic-field dependence of impurity-induced muon depolarization in noble metals

    Schillaci, M.E.; Heffner, R.H.; Hutson, R.L.; Leon, M.; Cooke, D.W.; Dodds, S.A.; Richards, P.M.; MacLaughlin, D.E.; Boekema, C.

    1983-01-01

    We have measured the magnetic-field dependence of the muon depolarization rate up to 5 kOe in AuGd (350 ppM), AgGd (340 ppM) and AgEr (300 ppM). A simple model which includes both dipolar and nearest-neighbor contact interactions between the muon and the magnetic impurity does not fit the data. An axial crystal-field interaction, arising from the electric-field gradient induced by the muon at the site of the impurity, is found to dominate the Hamiltonian, and may have a large effect on the field dependence

  20. Magnetic field dependence of impurity-induced muon depolarization in noble metals

    Schillaci, M.E.; Heffner, R.H.; Hutson, R.L.; Leon, M.; Cooke, D.W.; Yaouanc, A. (Los Alamos National Lab., NM (USA)); Dodds, S.A. (Rice Univ., Houston, TX (USA). Dept. of Physics); Richards, P.M. (Sandia National Labs., Albuquerque, NM (USA)); MacLaughlin, D.E. (California Univ., Riverside (USA)); Boekema, C. (Texas Tech Univ., Lubbock (USA))

    1984-01-01

    The authors have measured the magnetic field dependence of the muon depolarization rate up to 5 kOe in AuGd (350 ppm), AgGd (340 ppm) and AgEr (300 ppm). A simple model which includes both dipolar and nearest-neighbor contact interactions between the muon and the magnetic impurity does not fit the data. An axial crystal-field interaction, arising from the electric field gradient induced by the muon at the site of the impurity, is found to dominate the Hamiltonian, and may have a large effect on the field dependence.

  1. How to measure separation and angles between inter-molecular fluorescent markers

    Flyvbjerg, Henrik

    Structure and function of an individual biomolecule can be explored with minimum two fluorescent markers of different colors. Since the light of such markers can be spec- trally separated and imaged simultaneously, the markers can be colocalized. Here, we describe the method used for such two......-color colocalization microscopy. Then we extend it to fluorescent markers with fixed orientations and in intramolecular proximity. Our benchmarking of this extension produced two extra results: (a) we established short double-labeled DNA molecules as probes of 3D orientation of anything to which one can attach them...

  2. Distinguishing nitrogen fertilization levels in field corn (Zea mays L.) with actively induced fluorescence and passive reflectance measurements

    McMurtrey, J.E. III; Chappelle, E.W.; Kim, M.S.; Meisinger, J.J.; Corp, L.A

    1994-01-01

    Laser-induced fluorescence (LIF) is an active sensing technique capable of capturing immediate and specific indications of changes in plant physiology and metabolism as they relate to the concentration and photosynthetic activity of the plant pigments. Reflectance is a passive sensing technique that can capture differences in the concentration of the primary plant pigments. Fluorescence and reflectance were compared for their ability to measure levels of plant stress that are of agronomic importance in corn (Zea mays L.) crops. Laboratory LIF and reflectance spectra were made on excised leaves from field grown corn. Changes in the visible region of the spectrum were compared between groups of plants fertilized with seven different levels of nitrogen (N) fertilization. A pulsed nitrogen laser emitting photons at a wavelength of 337 nm was used as a fluorescence excitation source. Differences in maximum intensity of fluorescence occurred at 440 nm, 525 nm, 685 nm, and 740 nm. Significant separations were found between levels of N fertilization at several LIF wavelength ratios. Several reflectance algorithms also produced significant separations between certain levels of N fertilization

  3. Self-Assembled Fluorescent Bovine Serum Albumin Nanoprobes for Ratiometric pH Measurement inside Living Cells.

    Yang, Qiaoyu; Ye, Zhongju; Zhong, Meile; Chen, Bo; Chen, Jian; Zeng, Rongjin; Wei, Lin; Li, Hung-wing; Xiao, Lehui

    2016-04-20

    In this work, we demonstrated a new ratiometric method for the quantitative analysis of pH inside living cells. The structure of the nanosensor comprises a biofriendly fluorescent bovine serum albumin (BSA) matrix, acting as a pH probe, and pH-insensitive reference dye Alexa 594 enabling ratiometric quantitative pH measurement. The fluorescent BSA matrix was synthesized by cross-linking of the denatured BSA proteins in ethanol with glutaraldehyde. The size of the as-synthesized BSA nanoparticles can be readily manipulated from 30 to 90 nm, which exhibit decent fluorescence at the peak wavelength of 535 nm with a pH response range of 6-8. The potential of this pH sensor for intracellular pH monitoring was demonstrated inside living HeLa cells, whereby a significant change in fluorescence ratio was observed when the pH of the cell was switched from normal to acidic with anticancer drug treatment. The fast response of the nanosensor makes it a very powerful tool in monitoring the processes occurring within the cytosol.

  4. Uncertainty calculations for the measurement of in vivo bone lead by x-ray fluorescence

    O'Meara, J M; Fleming, D E B

    2009-01-01

    In order to quantify the bone lead concentration from an in vivo x-ray fluorescence measurement, typically two estimates of the lead concentration are determined by comparing the normalized x-ray peak amplitudes from the Kα 1 and Kβ 1 features to those of the calibration phantoms. In each case, the normalization consists of taking the ratio of the x-ray peak amplitude to the amplitude of the coherently scattered photon peak in the spectrum. These two Pb concentration estimates are then used to determine the weighted mean lead concentration of that sample. In calculating the uncertainties of these measurements, it is important to include any covariance terms where appropriate. When determining the uncertainty of the lead concentrations from each x-ray peak, the standard approach does not include covariance between the x-ray peaks and the coherently scattered feature. These spectral features originate from two distinct physical processes, and therefore no covariance between these features can exist. Through experimental and simulated data, we confirm that there is no observed covariance between the detected Pb x-ray peaks and the coherently scattered photon signal, as expected. This is in direct contrast to recent work published by Brito (2006 Phys. Med. Biol. 51 6125-39). There is, however, covariance introduced in the calculation of the weighted mean lead concentration due to the common coherent normalization. This must be accounted for in calculating the uncertainty of the weighted mean lead concentration, as is currently the case. We propose here an alternative approach to calculating the weighted mean lead concentration in such a way as to eliminate the covariance introduced by the common coherent normalization. It should be emphasized that this alternative approach will only apply in situations in which the calibration line intercept is not included in the calculation of the Pb concentration from the spectral data: when the source of the intercept is well

  5. A vacuum-UV laser-induced fluorescence experiment for measurement of rotationally and vibrationally excited H2

    Vankan, P.; Heil, S.B.S.; Mazouffre, S.; Engeln, R.; Schram, D.C.; Doebele, H.F.

    2004-01-01

    An experimental setup is built to detect spatially resolved rovibrationally excited hydrogen molecules via laser-induced fluorescence. To excite the hydrogen molecules, laser radiation is produced in the vacuum UV part of the spectrum. The laser radiation is tunable between 120 nm and 230 nm and has a bandwith of 0.15 cm -1 . The wavelength of the laser radiation is calibrated by simultaneous recording of the two-photon laser induced fluorescence spectrum of nitric oxide. The excited hydrogen populations are calibrated on the basis of coherent anti-Stokes Raman scattering measurements. A population distribution is measured in the shock region of a pure hydrogen plasma expansion. The higher rotational levels (J>5) show overpopulation compared to a Boltzmann distribution determined from the lower rotational levels (J≤5)

  6. Tracer-based laser-induced fluorescence measurement technique for quantitative fuel/air-ratio measurements in a hydrogen internal combustion engine.

    Blotevogel, Thomas; Hartmann, Matthias; Rottengruber, Hermann; Leipertz, Alfred

    2008-12-10

    A measurement technique for the quantitative investigation of mixture formation processes in hydrogen internal combustion engines (ICEs) has been developed using tracer-based laser-induced fluorescence (TLIF). This technique can be employed to fired and motored engine operation. The quantitative TLIF fuel/air-ratio results have been verified by means of linear Raman scattering measurements. Exemplary results of the simultaneous investigation of mixture formation and combustion obtained at an optical accessible hydrogen ICE are shown.

  7. Influence of thermal reduced depolarization on a repetition-frequency laser amplifier and compensation

    Xin-ying Jiang; Xiong-wei Yan; Zhen-guo Wang; Jian-gang Zheng; Ming-zhong Li; Jing-qin Su

    2015-01-01

    Thermal stress can induce birefringence in a laser medium, which can cause depolarization of the laser. The depolarization effect will be very severe in a high-average-power laser. Because the depolarization will make the frequency doubling efficiency decline, it should be compensated. In this paper, the thermal characteristics of two kinds of materials are analyzed in respect of temperature, thermal deformation and thermal stress. The depolarization result from thermal stress was simulated. Depolarization on non-uniform pumping was also simulated, and the compensation method is discussed.

  8. Energy and Beam-Offset dependence of the Luminosity weighted depolarization for CLIC

    Esberg, Jakob; Uggerhoj, Ulrik; Dalena, Barbara

    2011-01-01

    We report on simulations of e+e- depolarization due to beam-beam effects. These effects are studied for CLIC at 3 TeV, using GUINEA PIG++. We find a strong energy dependence of the luminosity weighted depolarization. In the luminosity peak at CLIC the total luminosity weighted depolarization remains below the one per-mil level. The effect of a vertical offset on the energy dependent depolarization is investigated. The depolarization in the luminosity peak remains below per-cent level even for 5sy offsets.

  9. A fluorescence-based method for direct measurement of submicrosecond intramolecular contact formation in biopolymers: an exploratory study with polypeptides.

    Hudgins, Robert R; Huang, Fang; Gramlich, Gabriela; Nau, Werner M

    2002-01-30

    A fluorescent amino acid derivative (Fmoc-DBO) has been synthesized, which contains 2,3-diazabicyclo[2.2.2]oct-2-ene (DBO) as a small, hydrophilic fluorophore with an extremely long fluorescence lifetime (325 ns in H2O and 505 ns in D2O under air). Polypeptides containing both the DBO residue and an efficient fluorescence quencher allow the measurement of rate constants for intramolecular end-to-end contact formation. Bimolecular quenching experiments indicated that Trp, Cys, Met, and Tyr are efficient quenchers of DBO (k(q) = 20, 5.1, 4.5, and 3.6 x 10(8) M(-1) x s(-1) in D2O), while the other amino acids are inefficient. The quenching by Trp, which was selected as an intrinsic quencher, is presumed to involve exciplex-induced deactivation. Flexible, structureless polypeptides, Trp-(Gly-Ser)n-DBO-NH2, were prepared by standard solid-phase synthesis, and the rates of contact formation were measured through the intramolecular fluorescence quenching of DBO by Trp with time-correlated single-photon counting, laser flash photolysis, and steady-state fluorometry. Rate constants of 4.1, 6.8, 4.9, 3.1, 2.0, and 1.1 x 10(7) s(-1) for n = 0, 1, 2, 4, 6, and 10 were obtained. Noteworthy was the relatively slow quenching for the shortest peptide (n = 0). The kinetic data are in agreement with recent transient absorption studies of triplet probes for related peptides, but the rate constants are significantly larger. In contrast to the flexible structureless Gly-Ser polypeptides, the polyproline Trp-Pro4-DBO-NH2 showed insignificant fluorescence quenching, suggesting that a high polypeptide flexibility and the possibility of probe-quencher contact is essential to induce quenching. Advantages of the new fluorescence-based method for measuring contact formation rates in biopolymers include high accuracy, fast time range (100 ps-1 micros), and the possibility to perform measurements in water under air.

  10. Orexins depolarize rostral ventrolateral medulla neurons and increase arterial pressure and heart rate in rats mainly via orexin 2 receptors.

    Huang, Shang-Cheng; Dai, Yu-Wen E; Lee, Yen-Hsien; Chiou, Lih-Chu; Hwang, Ling-Ling

    2010-08-01

    An injection of orexin A or B into the cisterna magna or the rostral ventrolateral medulla (RVLM), where bulbospinal vasomotor neurons are located, elevated arterial pressure (AP) and heart rate (HR). We examined how orexins affected RVLM neurons to regulate cardiovascular functions by using in vitro recordings of neuronal activity of the RVLM and in vivo measurement of cardiovascular functions in rats. Orexin A and B concentration-dependently depolarized RVLM neurons. At 100 nM, both peptides excited 42% of RVLM neurons. Tetrodotoxin failed to block orexin-induced depolarization. In the presence of N-(2-methyl-6-benzoxazolyl)-N'-1, 5-naphthyridin-4-yl urea (SB-334867), an orexin 1 receptor (OX(1)R) antagonist, orexin A depolarized 42% of RVLM neurons with a smaller, but not significantly different, amplitude (4.9 +/- 0.8 versus 7.2 +/- 1.1 mV). In the presence of (2S)-1- (3,4-dihydro-6,7-dimethoxy-2(1H)-isoquinolinyl)-3,3-dimethyl-2-[(4-pyridinylmethyl)amino]-1-butanone hydrochloride (TCS OX2 29), an orexin 2 receptor (OX(2)R) antagonist, orexin A depolarized 25% of RVLM neurons with a significantly smaller amplitude (1.7 +/- 0.5 mV). Coapplication of both antagonists completely eliminated orexin A-induced depolarization. An OX(2)R agonist, [Ala(11),D-Leu(15)]-orexin B, concentration-dependently depolarized RVLM neurons. Regarding neuronal phenotypes, orexins depolarized 88% of adrenergic, 43% of nonadrenergic, and 36 to 41% of rhythmically firing RVLM neurons. Intracisternal TCS OX2 29 (3 and 10 nmol) suppressed intracisternal orexin A-induced increases of AP and HR, whereas intracisternal SB-334867 (3 and 10 nmol) had no effect on the orexin A-induced increase of HR but suppressed the orexin A-induced pressor response at 10 nmol. We concluded that orexins directly excite RVLM neurons, which include bulbospinal vasomotor neurons, and regulate cardiovascular function mainly via the OX(2)R, with a smaller contribution from the OX(1)R.

  11. A fusion-spliced near-field optical fiber probe using photonic crystal fiber for nanoscale thermometry based on fluorescence-lifetime measurement of quantum dots.

    Fujii, Takuro; Taguchi, Yoshihiro; Saiki, Toshiharu; Nagasaka, Yuji

    2011-01-01

    We have developed a novel nanoscale temperature-measurement method using fluorescence in the near-field called fluorescence near-field optics thermal nanoscopy (Fluor-NOTN). Fluor-NOTN enables the temperature distributions of nanoscale materials to be measured in vivo/in situ. The proposed method measures temperature by detecting the temperature dependent fluorescence lifetimes of Cd/Se quantum dots (QDs). For a high-sensitivity temperature measurement, the auto-fluorescence generated from a fiber probe should be reduced. In order to decrease the noise, we have fabricated a novel near-field optical-fiber probe by fusion-splicing a photonic crystal fiber (PCF) and a conventional single-mode fiber (SMF). The validity of the novel fiber probe was assessed experimentally by evaluating the auto-fluorescence spectra of the PCF. Due to the decrease of auto-fluorescence, a six- to ten-fold increase of S/N in the near-field fluorescence lifetime detection was achieved with the newly fabricated fusion-spliced near-field optical fiber probe. Additionally, the near-field fluorescence lifetime of the quantum dots was successfully measured by the fabricated fusion-spliced near-field optical fiber probe at room temperature, and was estimated to be 10.0 ns.

  12. New developments in the analysis and measurement of thicknesses by excitation of the fluorescent lines by means of β particles

    Martinelli, P.

    1960-01-01

    The process for analysing and measuring the thickness of deposits by β-X fluorescence which we have already described has undergone further development. The use of promethium-147 and krypton-85 sources makes it possible to reduce the background noise which is observed with strontium-90. We present the results obtained for various measurements of the thickness of metallic coatings and the continuous measurement of calcium and of iron in ore samples. We describe the tests carried out with a view to analysing the X-rays by means of a crystal. (author) [fr

  13. CONTINUOUS MEASUREMENT OF THE CYTOPLASMIC PH IN LACTOCOCCUS-LACTIS WITH A FLUORESCENT PH INDICATOR

    MOLENAAR, D; ABEE, T; KONINGS, WN

    1991-01-01

    The cytoplasmic pH of Lactococcus lactis was studied with the fluorescent pH indicator 2',7'-bis-(2-carboxyethyl)-5 (and-6)-carboxyfluorescein (BCECF). A novel method was applied for loading bacterial cells with BCECF, which consists of briefly treating a dense cell suspension with acid in the

  14. Fluorescence lidar measurements at the archaeological site House of Augustus at Palatino, Rome

    Raimondi, Valentina; Alisi, Chiara; Barup, Kerstin; Bracciale, Maria Paola; Broggi, Alessandra; Conti, Cinzia; Hällström, Jenny; Lognoli, David; Palombi, Lorenzo; Santarelli, Maria Laura; Sprocati, Anna Rosa

    2013-10-01

    Early diagnostics and documentation fulfill an essential role for an effective planning of conservation and restoration of cultural heritage assets. In particular, remote sensing techniques that do not require the use of scaffolds or lifts, such as fluoresence lidar, can provide useful information to obtain an overall assessment of the status of the investigated surfaces and can be exploited to address analytical studies in selected areas. Here we present the results of a joint Italian-Swedish project focused on documenting and recording the status of some sections of the part closed to the public by using fluorescence hyperspectral imaging lidar. The lidar used a tripled-frequency Nd:YAG laser emitting at 355 nm as excitation source and an intensified, gated 512x512-pixel CCD as detector. The lidar had imaging capabilities thanks to a computer-controlled scanning mirror. The fluorescence characteristics of fresco wall paintings were compared to those of fresco fragments found at the same archaeological site and separately examined in the lab using FT-IR and Raman techniques for the identification of pigments. The fluorescence lidar was also used to remotely detect the growth of phototrophic biodeteriogens on the walls. The fluorescence lidar data were compared with results from biological sampling, cultivation and laboratory analysis by molecular techniques.

  15. Optimized measurements of separations and angles between intra-molecular fluorescent markers

    Mortensen, Kim; Sung, Jongmin; Flyvbjerg, Henrik

    2015-01-01

    We demonstrate a novel, yet simple tool for the study of structure and function of biomolecules by extending two-colour co-localization microscopy to fluorescent molecules with fixed orientations and in intra-molecular proximity. From each colour-separated microscope image in a time-lapse movie...

  16. New method of measuring the K-shell fluorescence yield of As

    Singh, K; Sahota, H S

    1984-02-01

    A new method for the determination of the K-shell fluorescence yield from the analysis of sum peaks observed with a high-resolution intrinsic Ge semiconductor detector in the decay of /sup 75/Se is described. The value found is ..omega..sub(K)(As)=0.574(18), which is in agreement with the fitted value of previous authors.

  17. Red and far red Sun-induced chlorophyll fluorescence as a measure of plant photosynthesis

    Rossini, P. M.; Nedbal, L.; Guanter, L.; Ač, Alexander; Alonso, L.; Burkart, A.; Cogliati, S.; Colombo, R.; Damm, A.; Drusch, M.; Hanuš, Jan; Janoutová, Růžena; Julitta, T.; Kokkalis, P.; Moreno, J.; Novotný, Jan; Panigada, C.; Pinto, F.; Schickling, A.; Schuettemeyer, D.; Zemek, František; Rascher, U.

    2015-01-01

    Roč. 42, č. 6 (2015), s. 1632-1639 ISSN 0094-8276 Institutional support: RVO:67179843 Keywords : sun-induced fluorescence * remote sensing * stress detection * airborne images * HyPlant Subject RIV: EH - Ecology, Behaviour Impact factor: 4.212, year: 2015

  18. Toward autonomous measurements of photosynthetic electron transport rates: An evaluation of active fluorescence-based measurements of photochemistry

    Silsbe, G.; Oxborough, K.; Suggett, D. J.; Forster, R. M.; Ihnken, S.; Komárek, Ondřej; Lawrenz, Evelyn; Prášil, Ondřej; Roettgers, R.; Šicner, M.; Simis, S. G. H.; Van Dijk, M. A.; Kromkamp, J. C.

    2015-01-01

    Roč. 13, MAR 2015 (2015), s. 138-155 ISSN 1541-5856 Institutional support: RVO:61388971 Keywords : REPETITION-RATE FLUOROMETRY * CAVITY ABSORPTION METER * CHLOROPHYLL FLUORESCENCE Subject RIV: EE - Microbiology, Virology Impact factor: 2.008, year: 2015

  19. Apricot melanoidins prevent oxidative endothelial cell death by counteracting mitochondrial oxidation and membrane depolarization.

    Annalisa Cossu

    Full Text Available The cardiovascular benefits associated with diets rich in fruit and vegetables are thought to be due to phytochemicals contained in fresh plant material. However, whether processed plant foods provide the same benefits as unprocessed ones is an open question. Melanoidins from heat-processed apricots were isolated and their presence confirmed by colorimetric analysis and browning index. Oxidative injury of endothelial cells (ECs is the key step for the onset and progression of cardiovascular diseases (CVD, therefore the potential protective effect of apricot melanoidins on hydrogen peroxide-induced oxidative mitochondrial damage and cell death was explored in human ECs. The redox state of cytoplasmic and mitochondrial compartments was detected by using the redox-sensitive, fluorescent protein (roGFP, while the mitochondrial membrane potential (MMP was assessed with the fluorescent dye, JC-1. ECs exposure to hydrogen peroxide, dose-dependently induced mitochondrial and cytoplasmic oxidation. Additionally detected hydrogen peroxide-induced phenomena were MMP dissipation and ECs death. Pretreatment of ECs with apricot melanoidins, significantly counteracted and ultimately abolished hydrogen peroxide-induced intracellular oxidation, mitochondrial depolarization and cell death. In this regard, our current results clearly indicate that melanoidins derived from heat-processed apricots, protect human ECs against oxidative stress.

  20. Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

    Piotr Kowalczuk

    2010-09-01

    Full Text Available This study presents results from field surveys performed in 2008 and 2009 in the southern Baltic in different seasons. The main goal of these measurements was to identify the empirical relationships between DOM optical properties and DOC. CDOM absorption and fluorescence and DOC concentrations were measured during thirteen research cruises. The values of the CDOM absorption coefficient at 370 nm aCDOM(370 ranged from 0.70 m-1 to 7.94 m-1, and CDOM fluorescence intensities (ex./em. 370/460 IFl, expressed in quinine sulphate equivalent units, ranged from 3.88 to 122.97 (in filtered samples. Dissolved organic carbon (DOC concentrations ranged from 266.7 to 831.7 µM C. There was a statistically significant linear relationship between the fluorescence intensity measured in the filtered samples and the CDOM absorption coefficient aCDOM(370, R2 = 0.87. There was much more scatter in the relationship between the fluorescence intensity measured in situ (i.e. in unprocessed water samples and the CDOM absorption coefficient aCDOM(370, resulting in a slight deterioration in the coefficient of determination R2 = 0.85. This indicated that the presence of particles could impact fluorometer output during in situ deployment. A calibration experiment was set up to quantify particle impact on the instrument output in raw marine water samples relative to readings from filtered samples. The bias calculated for the absolute percentage difference between fluorescence intensities measured in raw and filtered water was low (-2.05%, but the effect of particle presence expressed as the value of the RMSE was significant and was as high as 35%. Both DOM fluorescence intensity (in raw water and filtered samples and the CDOM absorption coefficient aCDOM(370 are highly correlated with DOC concentration. The relationship between DOC and the CDOM absorption coefficient aCDOM(370 was better (R2 = 0.76 than the relationship between DOC and the respective fluorescence intensities

  1. In situ fluorescence measurements of protein-, humic- and HAP-like materials in the Northwestern Mediterranean Sea

    Tedetti, Marc; Bachet, Caroline; Germain, Chloé; Ferretto, Nicolas; Bhairy, Nagib; Guigue, Catherine; Besson, Florent; Beguery, Laurent; Goutx, Madeleine

    2015-04-01

    Understanding the biogeochemical functioning of the ocean requires high frequency measurements of dissolved organic matter (DOM) descriptors. For 10 years, the technological developments of fluorescence sensors try to cover this need. In this context, our laboratory developed the MiniFluo-UV sensor, a prototype of miniaturized submersible fluorometer for the detection of aromatic compounds that fluoresce in the UV spectral domain. The qualification of the sensor consisted in measurements of drift, linearity, repeatability, sensitivity to light, temperature and pressure, and detection limits of phenanthrene (HAP) and tryptophan (aromatic amino acid) in standard solutions. Measurements were also conducted in crude oil water soluble fractions (WSFs). The MiniFluo-UV sensor was then deployed in two distinct areas of the Northwestern Mediterranean Sea: 1) in the Gulf of Lion during the continuous monitoring of the surface water layer (DEWEX cruise, winter and spring 2013) and 2) in the Bay of Marseilles, heavily impacted by urban activities, where the sensor was mounted onto the SeaExplorer underwater glider and onto a CTD vertical profiler (July-December 2014). These platforms were also equipped with a humic-like fluorescence sensor and other sensors for hydrological and biogeochemical parameters (T, S, Chla, oxygen, turbidity). The patterns of fluorescence signatures enabled to distinguish interesting distributions of DOM in relation with hydrological features and spring biological production in the Gulf of Lion, and showed the accumulation of contaminants in marine areas under anthropogenic pressure. This work was conducted within the framework of the ANR-09-ECOT-009-01 "IBISCUS" in collaboration with ALSEAMAR-ALCEN (Aix-en-Provence) and MicroModule (Brest) companies. It is relevant to WP5 NEXOS objectives. The SACEUP team of the DEWEX-MERMEX experiment is warmly acknowledged.

  2. T-matrix modeling of linear depolarization by morphologically complex soot and soot-containing aerosols

    Mishchenko, Michael I.; Liu, Li; Mackowski, Daniel W.

    2013-01-01

    We use state-of-the-art public-domain Fortran codes based on the T-matrix method to calculate orientation and ensemble averaged scattering matrix elements for a variety of morphologically complex black carbon (BC) and BC-containing aerosol particles, with a special emphasis on the linear depolarization ratio (LDR). We explain theoretically the quasi-Rayleigh LDR peak at side-scattering angles typical of low-density soot fractals and conclude that the measurement of this feature enables one to evaluate the compactness state of BC clusters and trace the evolution of low-density fluffy fractals into densely packed aggregates. We show that small backscattering LDRs measured with ground-based, airborne, and spaceborne lidars for fresh smoke generally agree with the values predicted theoretically for fluffy BC fractals and densely packed near-spheroidal BC aggregates. To reproduce higher lidar LDRs observed for aged smoke, one needs alternative particle models such as shape mixtures of BC spheroids or cylinders. -- Highlights: ► New superposition T-matrix code is applied to soot aerosols. ► Quasi-Rayleigh side-scattering peak in linear depolarization (LD) is explained. ► LD measurements can be used for morphological characterization of soot aerosols

  3. A new front-face optical cell for measuring weak fluorescent emissions with time resolution in the picosecond time scale.

    Gryczynski, Z; Bucci, E

    1993-11-01

    Recent developments of ultrafast fluorimeters allow measuring time-resolved fluorescence on the picosecond time scale. This implies one is able to monitor lifetimes and anisotropy decays of highly quenched systems and of systems that contain fluorophores having lifetimes in the subnanosecond range; both systems that emit weak signals. The combination of weak signals and very short lifetimes makes the measurements prone to distortions which are negligible in standard fluorescence experiments. To cope with these difficulties, we have designed a new optical cell for front-face optics which offers to the excitation beam a horizontal free liquid surface in the absence of interactions with optical windows. The new cell has been tested with probes of known lifetimes and anisotropies. It proved very useful in detecting tryptophan fluorescence in hemoglobin. If only diluted samples are available, which cannot be used in front-face optics, regular square geometry can still be utilized by inserting light absorbers into a cuvette of 1 cm path length.

  4. Label-free silicon nanodots featured ratiometric fluorescent aptasensor for lysosomal imaging and pH measurement.

    Zhang, Yanan; Guo, Shan; Cheng, Shibo; Ji, Xinghu; He, Zhike

    2017-08-15

    The homeostasis of lysosomal pH is crucial in cell physiology. Developing small fluorescent nanosensors for lysosome imaging and ratiometric measurement of pH is highly demanded yet challenging. Herein, a pH-sensitive fluorescein tagged aptamer AS1411 has been utilized to covalently modify the label-free fluorescent silicon nanodots via a crosslinker for construction of a ratiometric pH biosensor. The established aptasensor exhibits the advantages of ultrasmall size, hypotoxicity, excellent pH reversibility and good photostability, which favors its application in an intracellular environment. Using human breast MCF-7 cancer cells and MCF-10A normal cells as the model, this aptasensor shows cell specificity for cancer cells and displays a wide pH response range of 4.5-8.0 in living cells. The results demonstrate that the pH of MCF-7 cells is 5.1, which is the expected value for acidic organelles. Lysosome imaging and accurate measurement of pH in MCF-7 cells have been successfully conducted based on this nanosensor via fluorescent microscopy and flow cytometry. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. Handheld Device Adapted to Smartphone Cameras for the Measurement of Sodium Ion Concentrations at Saliva-Relevant Levels via Fluorescence

    Michelle Lipowicz

    2015-06-01

    Full Text Available The use of saliva sampling as a minimally-invasive means for drug testing and monitoring physiology is a subject of great interest to researchers and clinicians. This study describes a new optical method based on non-axially symmetric focusing of light using an oblate spheroid sample chamber. The device is simple, lightweight, low cost and is easily attached to several different brands/models of smartphones (Apple, Samsung, HTC and Nokia for the measurement of sodium ion levels at physiologically-relevant saliva concentrations. The sample and fluorescent reagent solutions are placed in a specially-designed, lightweight device that excludes ambient light and concentrates 470-nm excitation light, from a low-power photodiode, within the sample through non-axially-symmetric refraction. The study found that smartphone cameras and post-image processing quantitated sodium ion concentration in water over the range of 0.5–10 mM, yielding best-fit regressions of the data that agree well with a data regression of microplate luminometer results. The data suggest that fluorescence can be used for the measurement of salivary sodium ion concentrations in low-resource or point-of-care settings. With further fluorescent assay testing, the device may find application in a variety of enzymatic or chemical assays.

  6. In vivo and in vitro characterization of σ70 constitutive promoters by real-time PCR and fluorescent measurements.

    Chappell, James; Freemont, Paul

    2013-01-01

    The characterization of DNA regulatory elements such as ribosome binding sites and transcriptional promoters is a fundamental aim of synthetic biology. Characterization of such DNA regulatory elements by monitoring the synthesis of fluorescent proteins is a commonly used technique to resolve the relative or absolute strengths. These measurements can be used in combination with mathematical models and computer simulation to rapidly assess performance of DNA regulatory elements both in isolation and in combination, to assist predictable and efficient engineering of complex novel biological devices and systems. Here we describe the construction and relative characterization of Escherichia coli (E. coli) σ(70) transcriptional promoters by monitoring the synthesis of green fluorescent protein (GFP) both in vivo in E. coli and in vitro in a E. coli cell-free transcription and translation reaction.

  7. Design and development of high-resolution atomic beam fluorescence spectroscopy facility for isotope shift and hyperfine structure measurements

    Acharyulu, G.V.S.G.; Sankari, M.; Kiran Kumar, P.V.; Suryanarayana, M.V.

    2012-01-01

    A high-resolution atomic beam fluorescence spectroscopy facility for the determination of isotope shifts and hyperfine structure in atomic species has been designed and developed. A resistively heated graphite tube atomic beam source was designed, tested and integrated into a compact interaction chamber for atomic beam fluorescence experiments. The design of the laser-atom interaction chamber and the source has been modified in a phased manner so as to achieve sub-Doppler resolution. The system has been used to record the hyperfine spectrum of the D2 transitions of Rb and K isotopes. The spectral resolution achieved is ∼ 26 MHz and is adequate to carry out high resolution measurement of isotope shifts and hyperfine structure of various atomic species. The other major advantage of the source is that it requires very small amounts of sample for achieving very good signal to noise ratio. (author)

  8. Recent Developments in Fluorescence Correlation Spectroscopy for Diffusion Measurements in Planar Lipid Membranes

    Macháň, Radek; Hof, Martin

    2010-01-01

    Roč. 11, č. 2 (2010), s. 427-457 E-ISSN 1422-0067 R&D Projects: GA ČR GA203/08/0114; GA AV ČR GEMEM/09/E006 Institutional research plan: CEZ:AV0Z40400503 Keywords : lateral diffusion * fluorescence fluctuation spectroscopy * confocal microscopy Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 2.279, year: 2010

  9. Reaction-time-resolved measurements of laser-induced fluorescence in a shock tube with a single laser pulse

    Zabeti, S.; Fikri, M.; Schulz, C.

    2017-11-01

    Shock tubes allow for the study of ultra-fast gas-phase reactions on the microsecond time scale. Because the repetition rate of the experiments is low, it is crucial to gain as much information as possible from each individual measurement. While reaction-time-resolved species concentration and temperature measurements with fast absorption methods are established, conventional laser-induced fluorescence (LIF) measurements with pulsed lasers provide data only at a single reaction time. Therefore, fluorescence methods have rarely been used in shock-tube diagnostics. In this paper, a novel experimental concept is presented that allows reaction-time-resolved LIF measurements with one single laser pulse using a test section that is equipped with several optical ports. After the passage of the shock wave, the reactive mixture is excited along the center of the tube with a 266-nm laser beam directed through a window in the end wall of the shock tube. The emitted LIF signal is collected through elongated sidewall windows and focused onto the entrance slit of an imaging spectrometer coupled to an intensified CCD camera. The one-dimensional spatial resolution of the measurement translates into a reaction-time-resolved measurement while the species information can be gained from the spectral axis of the detected two-dimensional image. Anisole pyrolysis was selected as the benchmark reaction to demonstrate the new apparatus.

  10. Relocation of the disulfonic stilbene sites of AE1 (band 3) on the basis of fluorescence energy transfer measurements.

    Knauf, Philip A; Law, Foon-Yee; Leung, Tze-Wah Vivian; Atherton, Stephen J

    2004-09-28

    Previous fluorescence resonance energy transfer (FRET) measurements, using BIDS (4-benzamido-4'-isothiocyanostilbene-2,2'-disulfonate) as a label for the disulfonic stilbene site and FM (fluorescein-5-maleimide) as a label for the cytoplasmic SH groups on band 3 (AE1), combined with data showing that the cytoplasmic SH groups lie about 40 A from the cytoplasmic surface of the lipid bilayer, would place the BIDS sites very near the membrane's inner surface, a location that seems to be inconsistent with current models of AE1 structure and mechanism. We reinvestigated the BIDS-FM distance, using laser single photon counting techniques as well as steady-state fluorescence of AE1, in its native membrane environment. Both techniques agree that there is very little energy transfer from BIDS to FM. The mean energy transfer (E), based on three-exponential fits to the fluorescence decay data, is 2.5 +/- 0.7% (SEM, N = 12). Steady-state fluorescence measurements also indicate BIDS to FM. These data indicate that the BIDS sites are probably over 63 A from the cytoplasmic SH groups, placing them near the middle or the external half of the lipid bilayer. This relocation of the BIDS sites fits with other evidence that the disulfonic stilbene sites are located farther toward the external membrane surface than Glu-681, a residue near the inner membrane surface whose modification affects the pH dependence and anion selectivity of band 3. The involvement of two relatively distant parts of the AE1 protein in transport function suggests that the transport mechanism requires coordinated large-scale conformational changes in the band 3 protein.

  11. Feasibility study for the in vivo measurement of lead in bone using L-x-ray fluorescence

    Wielopolski, L.; Slatkin, D.N.; Vartsky, D.; Ellis, K.J.; Cohn, S.H.

    1980-01-01

    Lead deposits in bone were detected by x-ray fluorescence using x-rays from either a 125 I or a 109 Cd source. Measurements were taken from tibia in intact human legs, post-mortem. On the basis of preliminary measurements, it was concluded that an exposure of one rad is adequate for determination of lead in bone. Both the advantages and the disadvantages of L-x-rays, used in the technique developed for this study, are compared with those of K-x-rays

  12. A new Technique for ultrafast velocity distribution measurements of atomic species by post-ionization laser induced fluorescence (PILIF)

    Tabares, F.L.

    1992-01-01

    A new method for single shot velocity distribution measurement of metallic impurities of relevance for studies involving continuous sources, such as limiter experiments in fusion devices or sputtering experiments, based in the combination of Resonant Enhanced Multiphoton Ionization (REMPI) and Laser Induced Fluorescence (LIF) is proposed. High ionization yield and good time resolution are expected according to the numerical simulation of the experiment that has been run for several atomic species. Other possible applications of REMPI to plasma edge physics and to conventional techniques for velocity distribution measurements are briefly addressed. (author)

  13. A new technique for ultrafast velocity distribution measurements of atomic species by post-ionization laser induced fluorescent (PILIF)

    Tabares, F.L.

    1992-01-01

    A new method for single shot velocity distribution measurement of metallic impurities of relevance for studies involving continuous sources, such as limiter experiments in fusion devices or sputtering experiments, based in the combination of Resonant Enhanced Multiphoton ionization (REMPI) and Laser Induced Fluorescence (LIF) is proposed. High ionization yield and good time resolution are expected according to the numerical simulation of the experiment that has been run for several atomic species. Other possible applications of REMPI to plasma edge physics and to conventional techniques for velocity distribution measurements are briefly addressed. (Author) 8 refs

  14. A new technique for ultrafast velocity distribution measurements of atomic species by post-ionization laser induced fluorescent (PILIF)

    Tabares, F.L.

    1992-07-01

    A new method for single shot velocity distribution measurement of metallic impurities of relevance for studies involving continuous sources, such as limiter experiments in fusion devices or sputtering experiments, based in the combination of Resonant Enhanced Multiphoton ionization (REMPI) and Laser Induced Fluorescence (LIF) is proposed. High ionization yield and good time resolution are expected according to the numerical simulation of the experiment that has been run for several atomic species. Other possible applications of REMPI to plasma edge physics and to conventional techniques for velocity distribution measurements are briefly addressed. (Author) 8 refs.

  15. Topics: in vivo measurement of thyroidal iodine content by x-ray fluorescent technique

    Imamura, Keiko

    1979-01-01

    Thyroidal iodine content gives useful informations in the fields of physiology, clinical medicine, health physics etc. Iodine content has been determined mainly for resected thyroids. Recently, x-ray fluorescent analysis has been extended as the in vivo technique first in the clinical medicine. Exciting sources used for the analysis of the thyroid are Am-241 or x-ray tube. Am-241 has a half-life of 438 years and emits #betta#-ray of 60 keV. Thyroid can be imaged by fluorescent scan utilizing strong (10 - 15 Ci) Am-241 source. Examination time is about 15 min and the radiation dose to the gland is about 15 - 60 mrad. Iodine content is determined by static fluorescent technique equipped with weaker source of less than 1 Ci. Thyroidal iodine content in normal subjects were analysed by this technique and the results were in good accordance with those obtained by in vitro analysis. Difference in the thyroidal iodine content between the Japanese population and other countries is not clear. Application to the pathological cases has provided many findings about the iodine content and its distribution which could not be obtained by in vitro analysis. This in vivo technique can be safely performed for infants and for pregnancies, and the relatively compact size of this apparatus could be widely used in the study of health physics and environmental problems. (author)

  16. Thermal-induced structural transition and depolarization behavior in (Bi0.5Na0.5)TiO3-BiAlO3 ceramics

    Peng, Ping; Nie, Hengchang; Cheng, Guofeng; Liu, Zhen; Wang, Genshui; Dong, Xianlin

    2018-03-01

    The depolarization temperature Td determines the upper temperature limit for the application of piezoelectric materials. However, the origin of depolarization behavior for Bi-based materials still remains controversial and the mechanism is intricate for different (Bi0.5Na0.5)TiO3-based systems. In this work, the structure and depolarization behavior of (1-x)(Bi0.5Na0.5)TiO3-xBiAlO3 (BNT-BA, x = 0, 0.02, 0.04, 0.06, 0.07) ceramics were investigated using a combination of X-ray diffraction and electrical measurements. It was found that as temperature increased, the induced long-range ferroelectric phase irreversibly transformed to the relaxor phase as evidenced by the temperature-dependent ferroelectric and dielectric properties, which corresponded to a gradual structural change from the rhombohedral to the pseudocubic phase. Therefore, the thermal depolarization behavior of BNT-BA ceramics was proposed to be directly related to the rhombohedral-pseudocubic transition. Furthermore, Td (obtained from thermally stimulated depolarization currents curves) was higher than the induced ferroelectric-relaxor phase transition temperature TFR (measured from dielectric curves). The phenomenon was quite different from other reported BNT-based systems, which may suggest the formation of polar nanoregions (PNRs) within macrodomains prior to the detexturation of short-range ferroelectric domains with PNRs or nanodomains.

  17. Characterisation of an inlet pre-injector laser-induced fluorescence instrument for the measurement of atmospheric hydroxyl radicals

    Novelli, A.; Hens, K.; Tatum Ernest, C.; Kubistin, D.; Regelin, E.; Elste, T.; Plass-Dülmer, C.; Martinez, M.; Lelieveld, J.; Harder, H.

    2014-10-01

    Atmospheric measurements of hydroxyl radicals (OH) are challenging due to a high reactivity and consequently low concentration. The importance of OH as an atmospheric oxidant has motivated a sustained effort leading to the development of a number of highly sensitive analytical techniques. Recent work has indicated that the laser-induced fluorescence of the OH molecules method based on the fluorescence assay by gas expansion technique (LIF-FAGE) for the measurement of atmospheric OH in some environments may be influenced by artificial OH generated within the instrument, and a chemical method to remove this interference was implemented in a LIF-FAGE system by Mao et al. (2012). While it is not clear whether other LIF-FAGE instruments suffer from the same interference, we have applied this method to our LIF-FAGE HORUS (Hydroxyl Radical Measurement Unit based on fluorescence Spectroscopy) system, and developed and deployed an inlet pre-injector (IPI) to determine the chemical zero level in the instrument via scavenging the ambient OH radical. We describe and characterise this technique in addition to its application at field sites in forested locations in Finland, Spain and Germany. Ambient measurements show that OH generated within the HORUS instrument is a non-negligible fraction of the total OH signal, which can comprise 30 to 80% during daytime and 60 to 100% during the night. The contribution of the background OH varied greatly between measurement sites and was likely related to the type and concentration of volatile organic compounds (VOCs) present at each particular location. Two inter-comparisons in contrasting environments between the HORUS instrument and two different chemical ionisation mass spectrometers (CIMS) are described to demonstrate the efficacy of IPI and the necessity of the chemical zeroing method for our LIF-FAGE instrument in such environments.

  18. Characterisation of an inlet pre-injector laser induced fluorescence instrument for the measurement of ambient hydroxyl radicals

    Novelli, A.; Hens, K.; Tatum Ernest, C.; Kubistin, D.; Regelin, E.; Elste, T.; Plass-Dülmer, C.; Martinez, M.; Lelieveld, J.; Harder, H.

    2014-01-01

    Ambient measurements of hydroxyl radicals (OH) are challenging due to a high reactivity and consequently low concentration. The importance of OH as an atmospheric oxidant has resulted in a sustained effort leading to the development of a number of analytical techniques. Recent work has indicated that the laser-induced fluorescence of the OH molecules method based on the fluorescence assay by gas expansion technique (LIF-FAGE) for the measurement of atmospheric OH in some environments may be influenced by artificial OH generated within the instrument, and a chemical method to remove this interference was implemented in a LIF-FAGE system by Mao et al. (2012). We have applied this method to our LIF-FAGE HORUS (HydrOxyl Radical Measurement Unit based on fluorescence Spectroscopy) system, and developed and deployed an inlet pre-injector (IPI) to determine the chemical zero level in the instrument via scavenging the ambient OH radical. We describe and characterise this technique in addition to its application at field sites in forested locations in Finland, Spain, and Germany. Ambient measurements show that OH generated within the HORUS instrument is a non-negligible fraction of the total OH signal, which can comprise 30% to 80% during the day and 60% to 100% during the night. The contribution of the background OH varied greatly between measurement sites and was likely related to the type and concentration of volatile organic compounds (VOCs) present at each particular location. Two inter-comparisons in contrasting environments between the HORUS instrument and two different chemical ionisation mass spectrometers (CIMS) are described to demonstrate the efficacy of the inlet-pre-injector and the necessity of the chemical zeroing method in such environments.

  19. Overcoming weak intrinsic depolarizing resonances with energy-jump

    Huang, H.; Ahrens, L.; Alessi, J.G.

    1997-01-01

    In the recent polarized proton runs in the AGS, a 5% partial snake was used successfully to overcome the imperfection depolarizing resonances. Polarized proton beam was accelerated up to the required RHIC injection energy of 25 GeV. However, significant amount of polarization was lost at 0+ν y , 12+ν y and 36+ν y , which is believed to be partially due to the coupling resonances. To overcome the coupling resonance, an energy-jump was generated by rapidly changing the beam circumference using the powerful AGS rf system. It clearly demonstrates that the novel energy-jump method can successfully overcome coupling resonances and weak intrinsic resonances

  20. Thermally stimulated depolarization currents in ThO2

    Campos, L.L.

    1979-01-01

    Thermally Stimulated Depolarization Currents (TSDC) have been detected in polycrystalline samples of ThO 2 in the temperature range 100K - 350K. The induced polarization is found to be due to migration of charge carriers over microscopic distances with trapping at grain boundaries. Moreover the density of charges carriers released from trapping sites, upon heating the cooled previously dc biased specimen, decreases for increasing sintering temperature, suggesting the use of the technique to the study of grain growth in the bulk of ceramic nuclear oxides [pt

  1. Applications of MODIS Fluorescent Line Height Measurements to Monitor Water Quality Trends and Algal Bloom Activity

    Fischer, Andrew; Moreno-Mardinan, Max; Ryan, John P.

    2012-01-01

    Recent advances in satellite and airborne remote sensing, such as improvements in sensor and algorithm calibrations, processing techniques and atmospheric correction procedures have provided for increased coverage of remote-sensing, ocean-color products for coastal regions. In particular, for the Moderate Resolution Imaging Spectrometer (MODIS) sensor calibration updates, improved aerosol retrievals and new aerosol models has led to improved atmospheric correction algorithms for turbid waters and have improved the retrieval of ocean color in coastal waters. This has opened the way for studying ocean phenomena and processes at finer spatial scales, such as the interactions at the land-sea interface, trends in coastal water quality and algal blooms. Human population growth and changes in coastal management practices have brought about significant changes in the concentrations of organic and inorganic, particulate and dissolved substances entering the coastal ocean. There is increasing concern that these inputs have led to declines in water quality and have increase local concentrations of phytoplankton, which cause harmful algal blooms. In two case studies we present MODIS observations of fluorescence line height (FLH) to 1) assess trends in water quality for Tampa Bay, Florida and 2) illustrate seasonal and annual variability of algal bloom activity in Monterey Bay, California as well as document estuarine/riverine plume induced red tide events. In a comprehensive analysis of long term (2003-2011) in situ monitoring data and satellite imagery from Tampa Bay we assess the validity of the MODIS FLH product against chlorophyll-a and a suite of water quality parameters taken in a variety of conditions throughout a large optically complex estuarine system. A systematic analysis of sampling sites throughout the bay is undertaken to understand how the relationship between FLH and in situ chlorophyll-a responds to varying conditions and to develop a near decadal trend in

  2. Spatial Variability Analysis of Within-Field Winter Wheat Nitrogen and Grain Quality Using Canopy Fluorescence Sensor Measurements

    Xiaoyu Song

    2017-03-01

    Full Text Available Wheat grain protein content (GPC is a key component when evaluating wheat nutrition. It is also important to determine wheat GPC before harvest for agricultural and food process enterprises in order to optimize the wheat grading process. Wheat GPC across a field is spatially variable due to the inherent variability of soil properties and position in the landscape. The objectives of this field study were: (i to assess the spatial and temporal variability of wheat nitrogen (N attributes related to the grain quality of winter wheat production through canopy fluorescence sensor measurements; and (ii to examine the influence of spatial variability of soil N and moisture across different growth stages on the wheat grain quality. A geostatistical approach was used to analyze data collected from 110 georeferenced locations. In particular, Ordinary Kriging Analysis (OKA was used to produce maps of wheat GPC, GPC yield, and wheat canopy fluorescence parameters, including simple florescence ratio and Nitrogen Balance Indices (NBI. Soil Nitrate-Nitrogen (NO3-N content and soil Time Domain Reflectometry (TDR value in the study field were also interpolated through the OKA method. The fluorescence parameter maps, soil NO3-N and soil TDR maps obtained from the OKA output were compared with the wheat GPC and GPC yield maps in order to assess their relationships. The results of this study indicate that the NBI spatial variability map in the late stage of wheat growth can be used to distinguish areas that produce higher GPC.

  3. Measurement of interferences associated with the detection of the hydroperoxy radical in the atmosphere using laser-induced fluorescence

    Lew, Michelle M.; Dusanter, Sebastien; Stevens, Philip S.

    2018-01-01

    One technique used to measure concentrations of the hydroperoxy radical (HO2) in the atmosphere involves chemically converting it to OH by addition of NO and subsequent detection of OH. However, some organic peroxy radicals (RO2) can also be rapidly converted to HO2 (and subsequently OH) in the presence of NO, interfering with measurements of ambient HO2 radical concentrations. This interference must be characterized for each instrument to determine to what extent various RO2 radicals interfere with measurements of HO2 and to assess the impact of this interference on past measurements. The efficiency of RO2-to-HO2 conversion for the Indiana University laser-induced fluorescence-fluorescence assay by gas expansion (IU-FAGE) instrument was measured for a variety of RO2 radicals. Known quantities of OH and HO2 radicals were produced from the photolysis of water vapor at 184.9 nm, and RO2 radicals were produced by the reaction of several volatile organic compounds (VOCs) with OH. The conversion efficiency of RO2 radicals to HO2 was measured when NO was added to the sampling cell for conditions employed during several previous field campaigns. For these conditions, approximately 80 % of alkene-derived RO2 radicals and 20 % of alkane-derived RO2 radicals were converted to HO2. Based on these measurements, interferences from various RO2 radicals contributed to approximately 35 % of the measured HO2 signal during the Mexico City Metropolitan Area (MCMA) 2006 campaign (MCMA-2006), where the measured VOCs consisted of a mixture of saturated and unsaturated species. However, this interference can contribute more significantly to the measured HO2 signal in forested environments dominated by unsaturated biogenic emissions such as isoprene.

  4. Fluorescent optical position sensor

    Weiss, Jonathan D.

    2005-11-15

    A fluorescent optical position sensor and method of operation. A small excitation source side-pumps a localized region of fluorescence at an unknown position along a fluorescent waveguide. As the fluorescent light travels down the waveguide, the intensity of fluorescent light decreases due to absorption. By measuring with one (or two) photodetectors the attenuated intensity of fluorescent light emitted from one (or both) ends of the waveguide, the position of the excitation source relative to the waveguide can be determined by comparing the measured light intensity to a calibrated response curve or mathematical model. Alternatively, excitation light can be pumped into an end of the waveguide, which generates an exponentially-decaying continuous source of fluorescent light along the length of the waveguide. The position of a photodetector oriented to view the side of the waveguide can be uniquely determined by measuring the intensity of the fluorescent light emitted radially at that location.

  5. Monitoring the Aggregation of Dansyl Chloride in Acetone through Fluorescence Measurements

    FANG,Yu(房喻); YIN,Yi-Qing(尹艺青); HU,Dao-Dao(胡道道); GAO,Gai-Ling(高改玲)

    2002-01-01

    The aggregation of dansyl chloride (DNS-Cl) in acetone has been studied in detail by steady-state fluorescence techniques. It has been demonstrated that DNS-Cl is stable in acetone during purification and aggregation study processes. The aggregates are not solvolyzed in acetone, and do not take part in any chemical reactions either. It has been found that DNS-Cl tends to aggregate even when its concentration is much lower than its solubility in acetone. The aggregation is reversible, and both the aggregation and the deaggregation are very slow processes.Introduction of SDS has a positive effect upon the formation and stabilization of the aggregates.

  6. Precise measurement of the absolute yield of fluorescence photons in atmospheric gases

    Ave, M.; Boháčová, Martina; Daumiller, K.; Di Carlo, P.; Di Giulio, C.; San Luis, P.F.; Gonzales, D.; Hojvat, C.; Hörandel, J.R.; Hrabovský, M.; Iarlori, M.; Keilhauer, B.; Klages, H.; Kleifges, M.; Kuehn, F.; Monasor, M.; Nožka, Libor; Palatka, Miroslav; Petrera, S.; Privitera, P.; Řídký, Jan; Rizi, V.; d´Orfeuil, B.R.; Salamida, F.; Schovánek, Petr; Šmída, Radomír; Spinka, H.; Ulrich, A.; Verzi, V.; Williams, C.

    212-213, - (2011), s. 356-361 ISSN 0920-5632 R&D Projects: GA MŠk LC527; GA MŠk(CZ) 1M06002; GA MŠk(CZ) LA08016; GA AV ČR KJB100100904 Institutional research plan: CEZ:AV0Z10100502; CEZ:AV0Z10100522 Keywords : airfly * fluorescence photons * ultra-high energy cosmic rays Subject RIV: BF - Elementary Particles and High Energy Physics http://particle.astro.ru.nl/pub/NuclPhysB212-356.pdf

  7. Reaction rate constant of HO2+O3 measured by detecting HO2 from photofragment fluorescence

    Manzanares, E. R.; Suto, Masako; Lee, Long C.; Coffey, Dewitt, Jr.

    1986-01-01

    A room-temperature discharge-flow system investigation of the rate constant for the reaction 'HO2 + O3 yields OH + 2O2' has detected HO2 through the OH(A-X) fluorescence produced by photodissociative excitation of HO2 at 147 nm. A reaction rate constant of 1.9 + or - 0.3 x 10 to the -15th cu cm/molecule per sec is obtained from first-order decay of HO2 in excess O3; this agrees well with published data.

  8. Development of an electrothermal atomization laser-excited atomic fluorescence spectrometry procedure for direct measurements of arsenic in diluted serum.

    Swart, D J; Simeonsson, J B

    1999-11-01

    A procedure for the direct determination of arsenic in diluted serum by electrothermal atomization laser-excited atomic fluorescence spectrometry (ETA-LEAFS) is reported. Laser radiation needed to excite As at 193.696 and 197.197 nm is generated as the second anti-Stokes stimulated Raman scattering output of a frequency-doubled dye laser operating near 230.5 and 235.5 nm, respectively. Two different LEAFS schemes have been utilized and provide limits of detection of 200-300 fg for As in aqueous standards. When measurements of serum samples diluted 1:10 with deionized water are performed, a stable background signal is observed that can be accounted for by taking measurements with the laser tuned off-wavelength. No As is detected in any of the bovine or human serum samples analyzed. Measurements of 100 pg/mL standard additions of As to a diluted bovine serum sample utilizing either inorganic or organic As species demonstrate a linear relationship of the fluorescence signal to As spike concentration, but exhibit a sensitivity of approximately half that observed in pure aqueous standards. The limit of detection for As in 1:10 diluted serum samples is 65 pg/mL or 650 fg absolute mass, which corresponds to 0.65 ng/mL As in undiluted serum. To our knowledge, the ETA-LEAFS procedure is currently the only one capable of directly measuring As in diluted serum at these levels.

  9. Stability and morphology of Ag nanoplatelets probed by depolarized dynamic light scattering

    Zimbone, M.; Contino, A.; Maccarrone, G.; Musumeci, P.; Lo Faro, M. J.; Calcagno, L.

    2018-06-01

    The stability of silver nanoplatelet (NP) suspensions prepared with different concentrations of trisodium citrate (TSC) was studied by depolarized dynamic light scattering (DDLS) and UV–vis spectrometry. The morphology of the nanoparticles, as well as the color and stability of the sols, are tuned by the concentration of the capping agent. The nanoparticles prepared with high TSC concentration (>10‑4 M) are blue triangular NPs showing a slight truncation of the tips with aging. When low TSC concentrations are used, the color of the sols changes from blue to yellow with aging time and a strong modification of the morphology occurs: the nanoparticle shape changes from triangular to spherical. Remarkably, they show a high degree of anisotropy. The aging process was followed by the UV–vis spectra and by measuring the rotational diffusion coefficient by DDLS, providing information on the nanoparticle size and shape evolution. The high intensity of depolarized signal and the high value of rotational diffusion coefficient suggest that the aging process increases the thickness and the roughness of the nanoparticles

  10. Reproducibility of Macular Pigment Optical Density Measurement by Two-wave Length Auto-fluorescence in a Clinical Setting

    You, Qi-Sheng; Bartsch, Dirk-Uwe G.; Espina, Mark; Alam, Mostafa; Camacho, Natalia; Mendoza, Nadia; Freeman, William

    2015-01-01

    Purpose Macular pigment, composed of lutein, zeaxanthin, and meso-zeaxanthin, is postulated to protect against age-related macular degeneration (AMD), likely due to filtering blue light and its antioxidant properties. Macular pigment optical density (MPOD) is reported to be associated with macular function evaluated by visual acuity and multifocal electroretinogram. Given the importance of macular pigment, reliable and accurate measurement methods are important. The main purpose of current study is to determine the reproducibility of MPOD measurement by two-wave length auto-fluorescence method using scanning laser ophthalmoscopy. Methods Sixty eight eyes of 39 persons were enrolled in the study, including 11 normal eyes, 16 eyes with wet AMD, 16 eyes with dry AMD, 11 eyes with macular edema due to diabetic mellitus, branch retinal vein occlusion or macular telangiectasia and 14 eyes with tractional maculopathy including vitreomacular traction, epiretinal membrane or macular hole. MPOD was measured with a two-wavelength (488 and 514 nm) auto-fluorescence method with the Spectralis HRA+OCT after pupil dilation. The measurement was repeated for each eye 10 minutes later. The Analysis of variance (ANOVA) and Bland-Altman plot were used to assess the reproducibility between the two measurements. Results The mean MPOD at eccentricities of 1° and 2° was 0.36±0.17 (range: 0.04–0.69) and 0.15±0.08(range: −0.03, 0.35) for the first measurement and 0.35±0.17 (range: 0.02, 0.68) and 0.15±0.08 (range: −0.01, 0.33) for the second measurement respectively. The difference between the two measurements was not statistically significant, and the Bland-Altman plot showed 7.4% and 5.9% points outside the 95% limits of agreement, indicating an overall excellent reproducibility. Similarly, there is no significant difference between the first and second measurements of MPOD volume within eccentricities of 1°, 2° and 6° radius, and the Bland-Altman plot showed 8.8%, 2.9% and

  11. Analysis of spin depolarizing effects in electron storage rings

    Boege, M.

    1994-05-01

    In this thesis spin depolarizing effects in electron storage rings are analyzed and the depolarizing effects in the HERA electron storage ring are studied in detail. At high beam energies the equilibrium polarization is limited by nonlinear effects. This will be particularly true in the case of HERA, when the socalled ''spin rotators'' are inserted which are designed to provide longitudinal electron polarization for the HERMES experiment in 1994 and later for the H1 and ZEUS experiment. It is very important to quantify the influence of these effects theoretically by a proper modelling of HERA, so that ways can be found to get a high degree of polarization in the real machine. In this thesis HERA is modelled by the Monte-Carlo tracking program SITROS which was originally written by J. Kewisch in 1982 to study the polarization in PETRA. The first part of the thesis is devoted to a detailed description of the fundamental theoretical concepts on which the program is based. Then the approximations which are needed to overcome computing time limitations are explained and their influence on the simulation result is discussed. The systematic and statistical errors are studied in detail. Extensions of the program which allow a comparison of SITROS with the results given by ''linear'' theory are explained. (orig.)

  12. Measuring DNA hybridization using fluorescent DNA-stabilized silver clusters to investigate mismatch effects on therapeutic oligonucleotides.

    de Bruin, Donny; Bossert, Nelli; Aartsma-Rus, Annemieke; Bouwmeester, Dirk

    2018-04-06

    Short nucleic acid oligomers have found a wide range of applications in experimental physics, biology and medicine, and show potential for the treatment of acquired and genetic diseases. These applications rely heavily on the predictability of hybridization through Watson-Crick base pairing to allow positioning on a nanometer scale, as well as binding to the target transcripts, but also off-target binding to transcripts with partial homology. These effects are of particular importance in the development of therapeutic oligonucleotides, where off-target effects caused by the binding of mismatched sequences need to be avoided. We employ a novel method of probing DNA hybridization using optically active DNA-stabilized silver clusters (Ag-DNA) to measure binding efficiencies through a change in fluorescence intensity. In this way we can determine their location-specific sensitivity to individual mismatches in the sequence. The results reveal a strong dependence of the hybridization on the location of the mismatch, whereby mismatches close to the edges and center show a relatively minor impact. In parallel, we propose a simple model for calculating the annealing ratios of mismatched DNA sequences, which supports our experimental results. The primary result shown in this work is a demonstration of a novel technique to measure DNA hybridization using fluorescent Ag-DNA. With this technique, we investigated the effect of mismatches on the hybridization efficiency, and found a significant dependence on the location of individual mismatches. These effects are strongly influenced by the length of the used oligonucleotides. The novel probe method based on fluorescent Ag-DNA functions as a reliable tool in measuring this behavior. As a secondary result, we formulated a simple model that is consistent with the experimental data.

  13. Design, synthesis and evaluation of a new fluorescent probe for measuring polymyxin-lipopolysaccharide binding interactions

    Soon, Rachel L.; Velkov, Tony; Chiu, Francis; Thompson, Philip E.; Kancharla, Rashmi; Roberts, Kade; Larson, Ian; Nation, Roger L.; Li, Jian

    2011-01-01

    Fluorescence assays employing semi-synthetic or commercial dansyl-polymyxin B, have been widely employed to assess the affinity of polycations, including polymyxins, for bacterial cells and lipopolysaccharide (LPS). The five primary γ-amines on diaminobutyric-acid residues of polymyxin B are potentially derivatized with dansyl-cholride. Mass spectrometric analysis of the commercial product revealed a complex mixture of di- or tetra- dansyl-substituted polymyxin B. We synthesized a mono-substituted fluorescent derivative, dansyl[Lys]1polymyxinB3. The affinity of polymyxin for purified Gram-negative LPS, and whole bacterial cells was investigated. The affinity of dansyl[Lys]1polymyxinB3 for LPS was comparable to polymyxin B and colistin, and considerably greater (kd dansyl[Lys]1polymyxinB3 to LPS, attributed to electrostatic interactions. The hydrophobic dansyl moiety imparted a greater entropic contribution to the dansyl[Lys]1polymyxinB3-LPS reaction. Molecular modeling revealed a loss of electrostatic contact within the dansyl[Lys]1polymyxinB3-LPS complex due to steric hindrance from the dansyl[Lys]1 fluorophore; this corresponded with diminished antibacterial activity (MIC ≥ 16 μg/mL). Dansyl[Lys]1polymyxinB3 may prove useful as a screening tool for drug development. PMID:21050838

  14. Some considerations on X-ray fluorescence use in museum measurements - The case of medieval silver coins

    Constantinescu, B.; Bugoi, R.; Oberlaender-Tarnoveanu, E.; Parvan, K.

    2005-01-01

    The purpose of this paper is to give a general layout for the potential applications of Energy-Dispersive X-Ray Fluorescence (ED-XRF) technique for ancient silver coin characterization, using in-situ (in museums) measurements. Examples concerning originality testing, provenance (mines, workshops) identification, counterfeits selection, historical studies (manufacturing technologies, commercial, military and political relationships) are given. Two study cases of medieval coins are described: German brakteaten pfennige and Moldavian groschen. Other analysis methods and their use in the study of medieval coins are illustrated with the example of Particle Induced X-ray Emission (PIXE) technique. (authors)

  15. Application of laser fluorescence spectroscopy by two-photon excitation into atomic hydrogen density measurement in reactive plasmas

    Kajiwara, Toshinori; Takeda, Kazuyuki; Kim, Hee Je; Park, Won Zoo; Muraoka, Katsunori; Akazaki, Masanori; Okada, Tatsuo; Maeda, Mitsuo.

    1990-01-01

    Density profiles of hydrogen atoms in reactive plasmas of hydrogen and methane gases were measured, for the first time, using the laser fluorescence spectroscopy by two-photon excitation of Lyman beta transition and observation at the Balmer alpha radiation. Absolute density determinations showed atomic densities of around 3 x 10 17 m -3 , or the degree of dissociation to be 10 -4 . Densities along the axis perpendicular to the RF electrode showed peaked profiles, which were due to the balance of atomic hydrogen production by electron impact on molecules against diffusion loss to the walls. (author)

  16. Laser-induced fluorescence measurements of argon ion velocities near the sheath boundary of an argon-xenon plasma

    Lee, Dongsoo; Severn, Greg; Oksuz, Lutfi; Hershkowitz, Noah

    2006-01-01

    The Bohm sheath criterion in single- and two-ion species plasma is studied with laser-induced fluorescence using a diode laser. Xenon is added to a low pressure unmagnetized dc hot filament argon discharge confined by surface multidipole magnetic fields. The Ar II transition at 668.614 nm is adopted for optical pumping to detect the fluorescence from the plasma and to measure the argon ion velocity distribution functions with respect to positions relative to a negatively biased boundary plate. The structures of the plasma sheath and presheath are measured by an emissive probe. The ion concentrations of the two-species in the bulk plasma are calculated from ion acoustic wave experiments. Results are compared with previous experiments of Ar-He plasmas in which the argon ions were the heavier ion species. Unlike the previous results, the argon speed is slower than its own Bohm velocity near the sheath-presheath boundary in the Ar-Xe plasma where argon ions are the lighter ion species. We argue that this result is consistent with the behaviour of the helium ion required by the generalized Bohm criterion in the previous experiments with Ar-He plasmas. Further, our results suggest that the measured argon ion speed approaches the ion sound speed of the system

  17. A New System for Measuring Auto-Fluorescence Changes in Neovascular-AMD after Intravitreal Injection of Bavecizumab

    Mohammad Norouzifard

    2011-07-01

    Full Text Available Age-Related Macular Degeneration (AMD is the second disease diabetes which causes blindness in aged people. The only remedy for AMD is intravenous injection of bavecizumab. To prove the efficiency of remedy, the degenerated cells in Macula should be measured. In this article, a modern system is introduced to measure Auto-Fluorescence in Macula part of retina in order to obtain number of degenerated cells. The system consists of three main parts: Pre-processing stage is omission of margins and reversion of images in retina. Analysis stage is in charge of classification of images and elicitation of their features. In classification the target areas are identified by methods like morphology, dynamic threshold and connected comportments and the features of target area including Euclidean distance to the center of image and density. In the stage of understanding by gathering the features of each class, we will get the measurable parameter of evaluating Auto Fluorescence by the help of which we can count the number of degenerated cells of Macula area. The results are coming from statistical analysis, including linear regression and correlation of data. Experiments have been done on a database of 34 retina images of AMD patients. The average statistical error rate is equal to76 percent. In clinical reviews, the founded relation to disinflation of Macula has been proved, while there were no proved relations to the vision decreasing or increasing of patients.

  18. A Fluorescence Recovery After Photobleaching (FRAP) Technique for the Measurement of Solute Transport Across Surfactant-Laden Interfaces

    Browne, Edward P.; Hatton, T. Alan

    1996-01-01

    The technique of Fluorescence Recovery After Photobleaching (FRAP) has been applied to the measurement of interfacial transport in two-phase systems. FRAP exploits the loss of fluorescence exhibited by certain fluorophores when over-stimulated (photobleached), so that a two-phase system, originally at equilibrium, can be perturbed without disturbing the interface by strong light from an argon-ion laser and its recovery monitored by a microscope-mounted CCD camera as it relaxes to a new equilibrium. During this relaxation, the concentration profiles of the probe solute are measured on both sides of the interface as a function of time, yielding information about the transport characteristics of the system. To minimize the size of the meniscus between the two phases, a photolithography technique is used to selectively treat the glass walls of the cell in which the phases are contained. This allows concentration measurements to be made very close to the interface and increases the sensitivity of the FRAP technique.

  19. Measurement of liquid film thickness by optical fluorescence and its application to an oscillating piston positive displacement flowmeter

    Morton, Charlotte E; Baker, Roger C; Hutchings, Ian M

    2011-01-01

    The movement of the circular piston in an oscillating piston positive displacement flowmeter is important in understanding the operation of the flowmeter, and the leakage of liquid past the piston plays a key role in the performance of the meter. The clearances between the piston and the chamber are small, typically less than 60 µm. In order to measure this film thickness a fluorescent dye was added to the water passing through the meter, which was illuminated with UV light. Visible light images were captured with a digital camera and analysed to give a measure of the film thickness with an uncertainty of less than 7%. It is known that this method lacks precision unless careful calibration is undertaken. Methods to achieve this are discussed in the paper. The grey level values for a range of film thicknesses were calibrated in situ with six dye concentrations to select the most appropriate one for the range of liquid film thickness. Data obtained for the oscillating piston flowmeter demonstrate the value of the fluorescence technique. The method is useful, inexpensive and straightforward and can be extended to other applications where measurement of liquid film thickness is required

  20. Determination of the mass attenuation coefficients for X-ray fluorescence measurements correction by the Rayleigh to Compton scattering ratio

    Conti, C. C.; Anjos, M. J.; Salgado, C. M.

    2014-09-01

    X-ray fluorescence technique plays an important role in nondestructive analysis nowadays. The development of equipment, including portable ones, enables a wide assortment of possibilities for analysis of stable elements, even in trace concentrations. Nevertheless, despite of the advantages, one important drawback is radiation self-attenuation in the sample being measured, which needs to be considered in the calculation for the proper determination of elemental concentration. The mass attenuation coefficient can be determined by transmission measurement, but, in this case, the sample must be in slab shape geometry and demands two different setups and measurements. The Rayleigh to Compton scattering ratio, determined from the X-ray fluorescence spectrum, provides a link to the mass attenuation coefficient by means of a polynomial type equation. This work presents a way to construct a Rayleigh to Compton scattering ratio versus mass attenuation coefficient curve by using the MCNP5 Monte Carlo computer code. The comparison between the calculated and literature values of the mass attenuation coefficient for some known samples showed to be within 15%. This calculation procedure is available on-line at www.macx.net.br.

  1. A statistical analysis of the freshness of postharvest leafy vegetables with application of water based on chlorophyll fluorescence measurement

    Yichen Qiu

    2017-12-01

    Full Text Available Vegetable freshness is very important for both restaurant and home consumers. In market, sellers frequently apply water to leafy vegetables to make them not lose weight and look fresh; however, these vegetables may not be stored for a long time as they appear. After a time limit, they may be quickly rotten. It is thus meaningful to investigate early and simple detection tools to measure leafy vegetable freshness while they are frequently applied water in selling. In this work, three types of newly harvested leafy vegetables were bought from a local farmer market and stored in the air with room temperature and roots submerging in water. Chlorophyll a fluorescence (ChlF from the vegetables was measured each half a day for three days. The obtained ChlF data were analyzed statistically and the correlation of ChlF parameters and vegetable freshness/storage time was obtained. The k-mean classification was also performed. It is found that Fo, Fj, Fm/Fo, and Fv/Fm can be used as an early detection tool to differentiate the freshness of leafy vegetables on which water is constantly applied in storage without visible difference. Keywords: Vegetable freshness, Chlorophyll fluorescence, Food measurement

  2. The Use of Ratiometric Fluorescence Measurements of the Voltage Sensitive Dye Di-4-ANEPPS to Examine Action Potential Characteristics and Drug Effects on Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes.

    Hortigon-Vinagre, M P; Zamora, V; Burton, F L; Green, J; Gintant, G A; Smith, G L

    2016-12-01

    Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CM) and higher throughput platforms have emerged as potential tools to advance cardiac drug safety screening. This study evaluated the use of high bandwidth photometry applied to voltage-sensitive fluorescent dyes (VSDs) to assess drug-induced changes in action potential characteristics of spontaneously active hiPSC-CM. Human iPSC-CM from 2 commercial sources (Cor.4U and iCell Cardiomyocytes) were stained with the VSD di-4-ANEPPS and placed in a specialized photometry system that simultaneously monitors 2 wavebands of emitted fluorescence, allowing ratiometric measurement of membrane voltage. Signals were acquired at 10 kHz and analyzed using custom software. Action potential duration (APD) values were normally distributed in cardiomyocytes (CMC) from both sources though the mean and variance differed significantly (APD 90 : 229 ± 15 ms vs 427 ± 49 ms [mean ± SD, P < 0.01]; average spontaneous cycle length: 0.99 ± 0.02 s vs 1.47 ± 0.35 s [mean ± SD, P < 0.01], Cor.4U vs iCell CMC, respectively). The 10-90% rise time of the AP (T rise ) was ∼6 ms and was normally distributed when expressed as 1/[Formula: see text] in both cell preparations. Both cell types showed a rate dependence analogous to that of adult human cardiac cells. Furthermore, nifedipine, ranolazine, and E4031 had similar effects on cardiomyocyte electrophysiology in both cell types. However, ranolazine and E4031 induced early after depolarization-like events and high intrinsic firing rates at lower concentrations in iCell CMC. These data show that VSDs provide a minimally invasive, quantitative, and accurate method to assess hiPSC-CM electrophysiology and detect subtle drug-induced effects for drug safety screening while highlighting a need to standardize experimental protocols across preparations. © The Author 2016. Published by Oxford University Press on behalf of the Society of

  3. Enhanced Measurements of Chromophoric Dissolved Organic Matter (CDOM) for Water Quality Analysis using a New Simultaneous Absorbance and Fluorescence Instrument

    Gilmore, A. M.

    2009-12-01

    Water quality, with respect to suspended particles and dissolved organic and inorganic compounds, is now recognized as one of the top global environmental concerns. Contemporary research indicates fluorescence spectral analyses coupled with UV-VIS absorbance assays have the potential, especially when combined and coordinated, to facilitate rapid, robust quantification of a wide range of compounds, including interactions among them. Fluorescence excitation-emission matrices (EEMs) collected over the UV-VIS region provide a wealth of information on chromophoric dissolved organic matter (CDOM). CDOM includes humic and fulvic acid, chlorophyll, petroleum, protein, amino acid, quinone, fertilizer, pesticide, sewage and numerous other compound classes. Analysis of the EEMs using conventional and multivariate techniques, including primarily parallel factor analysis (PARAFAC), provides information about many types of CDOM relevant to carbon cycling and pollution of fresh, marine and drinking water sources. Of critical concern also are the CDOM interactions with, and optical activities of, dissolved inorganic compounds. Many of the inorganic compounds and oxygen demand parameters can be analyzed with a wide range of UV-VIS absorbance assays. The instrument is designed and optimized for high UV throughput and low stray light performance. The sampling optics are optimized for both fluorescence and absorbance detection with the same sample. Both EEM and absorbance measurements implement NIST traceable instrument correction and calibration routines. The fluorescence detection utilizes a high dynamic range CCD coupled to a high-resolution spectrograph while absorbance utilizes diode based detection with a high dynamic range and extremely low-stray light specifications. The CDOM analysis is facilitated by a transfer of the data and model information with the PARAFAC routine. The EEM analysis software package facilitates coordinated correction of and correlation with the

  4. Nano-viscosity of supercooled liquid measured by fluorescence correlation spectroscopy: Pressure and temperature dependence and the density scaling

    Meier, G.; Gapinski, J.; Ratajczyk, M.; Lettinga, M. P.; Hirtz, K.; Banachowicz, E.; Patkowski, A.

    2018-03-01

    The Stokes-Einstein relation allows us to calculate apparent viscosity experienced by tracers in complex media on the basis of measured self-diffusion coefficients. Such defined nano-viscosity values can be obtained through single particle techniques, like fluorescence correlation spectroscopy (FCS) and particle tracking (PT). In order to perform such measurements, as functions of pressure and temperature, a new sample cell was designed and is described in this work. We show that this cell in combination with a long working distance objective of the confocal microscope can be used for successful FCS, PT, and confocal imaging experiments in broad pressure (0.1-100 MPa) and temperature ranges. The temperature and pressure dependent nano-viscosity of a van der Waals liquid obtained from the translational diffusion coefficient measured in this cell by means of FCS obeys the same scaling as the rotational relaxation and macro-viscosity of the system.

  5. COMPARISON OF TWO TEMPERATURE MEASUREMENT METHODS BY UPCONVERSION FLUORESCENCE SPECTRA OF ERBIUM-DOPED LEAD-FLUORIDE NANO-GLASS-CERAMICS

    V. A. Aseev

    2015-05-01

    Full Text Available The study and compare of two temperature measurement methods is performed for the case of a lead-fluoride nano-glassceramics in the range from 317 to 423 K with a view to their application to temperature sensors. A method of temperature measurement by means of violet, green and red upconversion fluorescence spectra regression on latent structures and a method of temperature measurement by two fluorescence bands intensity ratio in green range are considered. It is shown that a four-dimensional space of latent structures is an optimum one in terms of temperature measurement accuracy. It made possible temperature determining with a relative error not larger than 0.15% at temperatures higher than 340 K by making use of fluorescence spectra training set with the step of 10 K. The method using two green bands fluorescence intensity ratio is inferior by the accuracy. Independence of pump power fluctuations is a significant advantage of the second method. To take advantage of the first method a stabilization of the pump power is necessary. The results of the work can be taken into account while developing optical temperature sensors with a better performance (in relation to accuracy and measurement range compared to existing ones which utilize temperature redistribution of fluorescence intensities in two closely-spaced bands or temperature dependence of fluorescence lifetime.

  6. Radioisotopic-excited x-ray fluorescent system for PPM measurement of toxic heavy metals

    Leddicotte, G.W.; Tolea, F.; Hansen, J.S.

    1974-01-01

    In agricultural research there is a continual awareness of the need to determine the role trace elements have as micronutrients in soil-plant systems. Similarly, these agronomic needs have a strong relationship to the concern other life sciences researchers have about the roles and effects of toxic trace elements on the natural environment and the physiological well-being of man and animals. However, in order for these interest areas to carry out more effective study efforts, more practical and precise analytical methodology and devices need to be developed. This report describes a research effort to develop an analytical system for micronutient as well as toxic elements based on x-ray fluorescence

  7. Monitoring the Aggregation of Dansyl Chloride in Acetone through Fluorescence Measurements

    FANG,Yu; YIN,Yi-Qing; 等

    2002-01-01

    The aggregation of dansyl chloride (DNS-Cl) in acetone has been studied in detail by steady-state fluorescence techniques.It has been demonstrated that DNS-Cl is stable in acetone during purification and aggregation study processes.The aggregates are not solvolyzed in acetone,and do not take part n any chemical reactions either.It has been found that DNS-Cl tends to aggregate even when its concentration is much lower than its solubility in acetone.The aggregation is reversible,and both the aggregation and the deaggregation are very slow processes.Introduction of SDS has a positive effect upon the formation and stabilization of the aggregates.

  8. A Homogeneous Time-Resolved Fluorescence Immunoassay Method for the Measurement of Compound W.

    Huang, Biao; Yu, Huixin; Bao, Jiandong; Zhang, Manda; Green, William L; Wu, Sing-Yung

    2018-01-01

    Using compound W (a 3,3'-diiodothyronine sulfate [T 2 S] immuno-crossreactive material)-specific polyclonal antibodies and homogeneous time-resolved fluorescence immunoassay assay techniques (AlphaLISA) to establish an indirect competitive compound W (ICW) quantitative detection method. Photosensitive particles (donor beads) coated with compound W or T 2 S and rabbit anti-W antibody were incubated with biotinylated goat anti-rabbit antibody. This constitutes a detection system with streptavidin-coated acceptor particle. We have optimized the test conditions and evaluated the detection performance. The sensitivity of the method was 5 pg/mL, and the detection range was 5 to 10 000 pg/mL. The intra-assay coefficient of variation averages W levels in extracts of maternal serum samples. This may have clinical application to screen congenital hypothyroidism in utero.

  9. Correlation of aeolian sediment transport measured by sand traps and fluorescent tracers

    Cabrera, Laura L.; Alonso, Ignacio

    2010-03-01

    Two different methods, fluorescent tracers and vertical sand traps, were simultaneously used to carry out an aeolian sediment transport study designed to test the goodness of fluorescent tracers in aeolian environments. Field experiments were performed in a nebkha field close to Famara beach at Lanzarote Island (Canary Islands, Spain) in a sector where the dunes were between 0.5 and 0.8 m height and 1-2 m wide and the vegetal cover was approximately 22%. In this dune field the sediment supply comes from Famara beach and is blown by trade winds toward the south, where the vegetation acts as natural sediment traps. Wind data were obtained by means of four Aanderaa wind speed sensors and one Aanderaa vane, all them distributed in a vertical array from 0.1 to 4 m height for 27 h. The average velocity at 1 m height during the experiment was 5.26 m s - 1 with the wind direction from the north. The tracer was under wind influence for 90 min at midday. During this period two series of sand traps (T1 and T2) N, S, E and W oriented were used. Resultant transport rates were 0.0131 and 0.0184 kg m - 1 min - 1 respectively. Tracer collection was performed with a sticky tape to sample only surface sediments. Tagged grains were visually counted under UV light. The transport rate was computed from the centroid displacement, that moved 0.875 m southwards, and the depth of the active layer considered was the size of one single grain. Taking into account these data the transport rate was 0.0072 kg m - 1 min - 1 . The discrepancy in results between both methods is related to several factors, such as the thickness of the active layer and the grain size difference between the tagged and the native material.

  10. Nondestructive method to coat thickness measurements through X-ray fluorescence

    Sanchez, F.

    1986-01-01

    It's described a system that permits thickness measurement and composition of Sn-Pb alloys to simultaneous measurement of Au over Ni over any base, beyond convestionals measurements, including flash coats or touch. (C.M.) [pt

  11. Atmospheric showers reconstruction and air fluorescence measurement for the study of ultra-energetic cosmic rays in the framework of EUSO project

    Colin, Pierre

    2005-01-01

    The EUSO project (Extreme Universe Space Observatory) is an innovative concept to measure the UHECR (Ultra High Energy Cosmic ray) spectrum by observing from space the light (air fluorescence and Cerenkov radiation) produced in the atmosphere by EAS (Extensive Air Shower). After an overview of the scientific context and an EUSO project description, a reconstruction method of EAS seen from space is presented. This new method enable one to reconstruct the UHECR parameters (Energy, direction, X_m_a_x) using only the fluorescence signal shape (without extra information). This method is very efficient for the horizontal EAS. The second part of this thesis deals with the study and the measurement of the air fluorescence with the MACFLY experiment (Measurement of Air Cerenkov and Fluorescence Light Yield). After a state of the art on the air fluorescence knowledge, a model of FLY (Florescence Light Yield) proportional to the Energy released in air is proposed. The experiment MACFLY and the data analysis method are described in detail. The experiment is composed of two devices. The first (Macfly1) which measures the fluorescence produced by only one particle measure the FLY of electron of 1.5 MeV (radioactive source), 20 GeV and 50 GeV (CERN test beam). The second (Macfly2) which measure the fluorescence produced by an electromagnetic shower, was the first experiment to measure the shower age dependence of the FLY. The pressure dependence was also measured by the two devices. Thanks to a GEANT4 simulation program, we compare our measurements with the FLY models. The assumption of the proportionality between the FLY and the energy deposited has been checked. One finds the same result with Macfly1 and Macfly2. In the air at 950 hPa, 23 deg. C and 0% of moisture one obtains: FLY=19 ± 4 photons/MeV. (author) [fr

  12. Classic maximum entropy recovery of the average joint distribution of apparent FRET efficiency and fluorescence photons for single-molecule burst measurements.

    DeVore, Matthew S; Gull, Stephen F; Johnson, Carey K

    2012-04-05

    We describe a method for analysis of single-molecule Förster resonance energy transfer (FRET) burst measurements using classic maximum entropy. Classic maximum entropy determines the Bayesian inference for the joint probability describing the total fluorescence photons and the apparent FRET efficiency. The method was tested with simulated data and then with DNA labeled with fluorescent dyes. The most probable joint distribution can be marginalized to obtain both the overall distribution of fluorescence photons and the apparent FRET efficiency distribution. This method proves to be ideal for determining the distance distribution of FRET-labeled biomolecules, and it successfully predicts the shape of the recovered distributions.

  13. Rising Intracellular Zinc by Membrane Depolarization and Glucose in Insulin-Secreting Clonal HIT-T15 Beta Cells

    Kira G. Slepchenko

    2012-01-01

    Full Text Available Zinc (Zn2+ appears to be intimately involved in insulin metabolism since insulin secretion is correlated with zinc secretion in response to glucose stimulation, but little is known about the regulation of zinc homeostasis in pancreatic beta-cells. This study set out to identify the intracellular zinc transient by imaging free cytosolic zinc in HIT-T15 beta-cells with fluorescent zinc indicators. We observed that membrane depolarization by KCl (30–60 mM was able to induce a rapid increase in cytosolic concentration of zinc. Multiple zinc transients of similar magnitude were elicited during repeated stimulations. The amplitude of zinc responses was not affected by the removal of extracellular calcium or zinc. However, the half-time of the rising slope was significantly slower after removing extracellular zinc with zinc chelator CaEDTA, suggesting that extracellular zinc affect the initial rising phase of zinc response. Glucose (10 mM induced substantial and progressive increases in intracellular zinc concentration in a similar way as KCl, with variation in the onset and the duration of zinc mobilization. It is known that the depolarization of beta-cell membrane is coupled with the secretion of insulin. Rising intracellular zinc concentration may act as a critical signaling factor in insulin metabolism of pancreatic beta-cells.

  14. Rising intracellular zinc by membrane depolarization and glucose in insulin-secreting clonal HIT-T15 beta cells.

    Slepchenko, Kira G; Li, Yang V

    2012-01-01

    Zinc (Zn(2+)) appears to be intimately involved in insulin metabolism since insulin secretion is correlated with zinc secretion in response to glucose stimulation, but little is known about the regulation of zinc homeostasis in pancreatic beta-cells. This study set out to identify the intracellular zinc transient by imaging free cytosolic zinc in HIT-T15 beta-cells with fluorescent zinc indicators. We observed that membrane depolarization by KCl (30-60 mM) was able to induce a rapid increase in cytosolic concentration of zinc. Multiple zinc transients of similar magnitude were elicited during repeated stimulations. The amplitude of zinc responses was not affected by the removal of extracellular calcium or zinc. However, the half-time of the rising slope was significantly slower after removing extracellular zinc with zinc chelator CaEDTA, suggesting that extracellular zinc affect the initial rising phase of zinc response. Glucose (10 mM) induced substantial and progressive increases in intracellular zinc concentration in a similar way as KCl, with variation in the onset and the duration of zinc mobilization. It is known that the depolarization of beta-cell membrane is coupled with the secretion of insulin. Rising intracellular zinc concentration may act as a critical signaling factor in insulin metabolism of pancreatic beta-cells.

  15. Monitoring changes in membrane polarity, membrane integrity, and intracellular ion concentrations in Streptococcus pneumoniae using fluorescent dyes.

    Clementi, Emily A; Marks, Laura R; Roche-Håkansson, Hazeline; Håkansson, Anders P

    2014-02-17

    Membrane depolarization and ion fluxes are events that have been studied extensively in biological systems due to their ability to profoundly impact cellular functions, including energetics and signal transductions. While both fluorescent and electrophysiological methods, including electrode usage and patch-clamping, have been well developed for measuring these events in eukaryotic cells, methodology for measuring similar events in microorganisms have proven more challenging to develop given their small size in combination with the more complex outer surface of bacteria shielding the membrane. During our studies of death-initiation in Streptococcus pneumoniae (pneumococcus), we wanted to elucidate the role of membrane events, including changes in polarity, integrity, and intracellular ion concentrations. Searching the literature, we found that very few studies exist. Other investigators had monitored radioisotope uptake or equilibrium to measure ion fluxes and membrane potential and a limited number of studies, mostly in Gram-negative organisms, had seen some success using carbocyanine or oxonol fluorescent dyes to measure membrane potential, or loading bacteria with cell-permeant acetoxymethyl (AM) ester versions of ion-sensitive fluorescent indicator dyes. We therefore established and optimized protocols for measuring membrane potential, rupture, and ion-transport in the Gram-positive organism S. pneumoniae. We developed protocols using the bis-oxonol dye DiBAC4(3) and the cell-impermeant dye propidium iodide to measure membrane depolarization and rupture, respectively, as well as methods to optimally load the pneumococci with the AM esters of the ratiometric dyes Fura-2, PBFI, and BCECF to detect changes in intracellular concentrations of Ca(2+), K(+), and H(+), respectively, using a fluorescence-detection plate reader. These protocols are the first of their kind for the pneumococcus and the majority of these dyes have not been used in any other bacterial

  16. A bench-top K X-ray fluorescence system for quantitative measurement of gold nanoparticles for biological sample diagnostics

    Ricketts, K., E-mail: k.ricketts@ucl.ac.uk [Division of Surgery and Interventional Sciences, University College London, Royal Free Campus, Rowland Hill Street, London NW3 2PF (United Kingdom); Guazzoni, C.; Castoldi, A. [Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano and INFN, Sezione di Milano P.za Leonardo da Vinci, 32-20133 Milano (Italy); Royle, G. [Department of Medical Physics and Bioengineering, University College London, Malet Place Engineering Building, Gower Street, London WC1E 6BT (United Kingdom)

    2016-04-21

    Gold nanoparticles can be targeted to biomarkers to give functional information on a range of tumour characteristics. X-ray fluorescence (XRF) techniques offer potential quantitative measurement of the distribution of such heavy metal nanoparticles. Biologists are developing 3D tissue engineered cellular models on the centimetre scale to optimise targeting techniques of nanoparticles to a range of tumour characteristics. Here we present a high energy bench-top K-X-ray fluorescence system designed for sensitivity to bulk measurement of gold nanoparticle concentration for intended use in such thick biological samples. Previous work has demonstrated use of a L-XRF system in measuring gold concentrations but being a low energy technique it is restricted to thin samples or superficial tumours. The presented system comprised a high purity germanium detector and filtered tungsten X-ray source, capable of quantitative measurement of gold nanoparticle concentration of thicker samples. The developed system achieved a measured detection limit of between 0.2 and 0.6 mgAu/ml, meeting specifications of biologists and being approximately one order of magnitude better than the detection limit of alternative K-XRF nanoparticle detection techniques. The scatter-corrected K-XRF signal of gold was linear with GNP concentrations down to the detection limit, thus demonstrating potential in GNP concentration quantification. The K-XRF system demonstrated between 5 and 9 times less sensitivity than a previous L-XRF bench-top system, due to a fundamental limitation of lower photoelectric interaction probabilities at higher K-edge energies. Importantly, the K-XRF technique is however less affected by overlying thickness, and so offers future potential in interrogating thick biological samples.

  17. A fluorescence XAFS measurement instrument in the soft x-ray region toward observation under operando conditions

    Honda, M., E-mail: honda.mitsunori@jaea.go.jp; Baba, Y.; Shimoyama, I.; Sekiguchi, T. [Quantum Beam Science Center, Japan Atomic Energy Agency (JAEA), 2-4 Shirakata-Shirane, Tokai-mura, Naka-gun, Ibaraki 319-1195 (Japan)

    2015-03-15

    X-ray absorption fine structure (XAFS) measurements are widely used for the analysis of electronic structure. Generally, XAFS in the soft X-ray region is measured under vacuum, but chemical structures under vacuum are typically different from those under operando conditions, where chemical species exhibit their function. Here, we developed an XAFS measurement instrument, as a step toward operando fluorescent, which yields XAFS measurement using synchrotron radiation in the soft X-ray region. We applied this method to analyze the local electronic structure of the sulfur atoms in L-cysteine in different pH solutions. In water at pH 7, the hydrogen atom does not dissociate from the thiol (-SH) group in L-cysteine, which forms a structure surrounded by and interacting with water molecules. The XAFS spectrum of L-cysteine in solution was altered by changing the pH. At pH 9, the hydrogen atom dissociated and a thiolate anion was formed. Although the -SH group was oxidized to SO{sub 4}{sup 2−} when L-cysteine was adsorbed on a metal surface and dried, no oxidation was observed in solution. This may be because the water molecules were densely packed and protected the -SH group from oxidation. Our results show that this instrument aimed toward operando fluorescence XAFS measurements in the soft X-ray region is useful for structural analysis of sulfur atoms in organic molecules in air and in solution. The instrument will be applied to the structural analysis of materials containing elements that have absorption edges in soft X-ray region, such as phosphorus and alkali metals (potassium and cesium). It will be also particularly useful for the analysis of samples that are difficult to handle under vacuum and materials that have specific functions in solution.

  18. Association between quantitative measures obtained using fluorescence-based methods and activity status of occlusal caries lesions in primary molars.

    Novaes, Tatiane Fernandes; Reyes, Alessandra; Matos, Ronilza; Antunes-Pontes, Laura Regina; Marques, Renata Pereira de Samuel; Braga, Mariana Minatel; Diniz, Michele Baffi; Mendes, Fausto Medeiros

    2017-05-01

    Fluorescence-based methods (FBM) can add objectiveness to diagnosis strategy for caries. Few studies, however, have focused on the evaluation of caries activity. To evaluate the association between quantitative measures obtained with FBM, clinical parameters acquired from the patients, caries detection, and assessment of activity status in occlusal surfaces of primary molars. Six hundred and six teeth from 113 children (4-14 years) were evaluated. The presence of a biofilm, caries experience, and the number of active lesions were recorded. The teeth were assessed using FBM: DIAGNOdent pen (Lfpen) and Quantitative light-induced fluorescence (QLF). As reference standard, all teeth were evaluated using the ICDAS (International Caries Detection and Assessment System) associated with clinical activity assessments. Multilevel regressions compared the FBM values and evaluated the association between the FBM measures and clinical variables related to the caries activity. The measures from the FBM were higher in cavitated lesions. Only, ∆F values distinguished active and inactive lesions. The LFpen measures were higher in active lesions, at the cavitated threshold (56.95 ± 29.60). Following regression analyses, only the presence of visible biofilm on occlusal surfaces (adjusted prevalence ratio = 1.43) and ∆R values of the teeth (adjusted prevalence ratio = 1.02) were associated with caries activity. Some quantitative measures from FBM parameters are associated with caries activity evaluation, which is similar to the clinical evaluation of the presence of visible biofilm. © 2016 BSPD, IAPD and John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  19. Chloride regulates afferent arteriolar contraction in response to depolarization

    Hansen, P B; Jensen, B L; Skott, O

    1998-01-01

    -Renal vascular reactivity is influenced by the level of dietary salt intake. Recent in vitro data suggest that afferent arteriolar contractility is modulated by extracellular chloride. In the present study, we assessed the influence of chloride on K+-induced contraction in isolated perfused rabbit...... afferent arterioles. In 70% of vessels examined, K+-induced contraction was abolished by acute substitution of bath chloride. Consecutive addition of Cl- (30, 60, 80, 100, 110, and 117 mmol/L) restored the sensitivity to K+, and half-maximal response was observed at 82 mmol/L chloride. The calcium channel...... antagonist diltiazem (10(-6) mol/L) abolished K+-induced contractions. Bicarbonate did not modify the sensitivity to chloride. Norepinephrine (10(-6) mol/L) induced full contraction in depolarized vessels even in the absence of chloride. Iodide and nitrate were substituted for chloride with no inhibitory...

  20. Compensating Faraday Depolarization by Magnetic Helicity in the Solar Corona

    Brandenburg, Axel; Ashurova, Mohira B. [Laboratory for Atmospheric and Space Physics, University of Colorado, Boulder, CO 80303 (United States); Jabbari, Sarah, E-mail: brandenb@nordita.org [School of Mathematical Sciences and Monash Centre for Astrophysics, Monash University, Clayton, VIC 3800 (Australia)

    2017-08-20

    A turbulent dynamo in spherical geometry with an outer corona is simulated to study the sign of magnetic helicity in the outer parts. In agreement with earlier studies, the sign in the outer corona is found to be opposite to that inside the dynamo. Line-of-sight observations of polarized emission are synthesized to explore the feasibility of using the local reduction of Faraday depolarization to infer the sign of helicity of magnetic fields in the solar corona. This approach was previously identified as an observational diagnostic in the context of galactic magnetic fields. Based on our simulations, we show that this method can be successful in the solar context if sufficient statistics are gathered by using averages over ring segments in the corona separately for the regions north and south of the solar equator.

  1. Analysis of mitochondrial mechanical dynamics using a confocal fluorescence microscope with a bent optical fibre.

    Li, Yongbo; Honda, Satoshi; Iwami, Kentaro; Ohta, Yoshihiro; Umeda, Norihiro

    2015-11-01

    The cells in the cardiovascular system are constantly subjected to mechanical forces created by blood flow and the beating heart. The effect of forces on cells has been extensively investigated, but their effect on cellular organelles such as mitochondria remains unclear. We examined the impact of nano-Newton forces on mitochondria using a bent optical fibre (BOF) with a flat-ended tip (diameter exceeding 2 μm) and a confocal fluorescence microscope. By indenting a single mitochondrion with the BOF tip, we found that the mitochondrial elastic modulus was proportional to the (-1/2) power of the mitochondrial radius in the 9.6-115 kPa range. We stained the mitochondria with a potential-metric dye (TMRE) and measured the changes in TMRE fluorescence intensity. We confirmed that more active mitochondria exhibit a higher frequency of repetitive transient depolarization. The same trend was observed at forces lower than 50 nN. We further showed that the depolarization frequency of mitochondria decreases under an extremely large force (nearly 100 nN). We conclude that mitochondrial function is affected by physical environmental factors, such as external forces at the nano-Newton level. © 2015 The Authors Journal of Microscopy © 2015 Royal Microscopical Society.

  2. A high-throughput direct fluorescence resonance energy transfer-based assay for analyzing apoptotic proteases using flow cytometry and fluorescence lifetime measurements.

    Suzuki, Miho; Sakata, Ichiro; Sakai, Takafumi; Tomioka, Hiroaki; Nishigaki, Koichi; Tramier, Marc; Coppey-Moisan, Maïté

    2015-12-15

    Cytometry is a versatile and powerful method applicable to different fields, particularly pharmacology and biomedical studies. Based on the data obtained, cytometric studies are classified into high-throughput (HTP) or high-content screening (HCS) groups. However, assays combining the advantages of both are required to facilitate research. In this study, we developed a high-throughput system to profile cellular populations in terms of time- or dose-dependent responses to apoptotic stimulations because apoptotic inducers are potent anticancer drugs. We previously established assay systems involving protease to monitor live cells for apoptosis using tunable fluorescence resonance energy transfer (FRET)-based bioprobes. These assays can be used for microscopic analyses or fluorescence-activated cell sorting. In this study, we developed FRET-based bioprobes to detect the activity of the apoptotic markers caspase-3 and caspase-9 via changes in bioprobe fluorescence lifetimes using a flow cytometer for direct estimation of FRET efficiencies. Different patterns of changes in the fluorescence lifetimes of these markers during apoptosis were observed, indicating a relationship between discrete steps in the apoptosis process. The findings demonstrate the feasibility of evaluating collective cellular dynamics during apoptosis. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. Strong dependence of rain-induced lidar depolarization on the illumination angle: experimental evidence and geometrical-optics interpretation.

    Roy, G; Bissonnette, L R

    2001-09-20

    Backscatter and depolarization lidar measurements from clouds and precipitation are reported as functions of the elevation angle of the pointing lidar direction. We recorded the data by scanning the lidar beam (Nd:YAG) at a constant angular speed of ~3.5 degrees /s while operating at a repetition rate of 10 Hz. We show that in rain there is an evident and at times spectacular dependence on the elevation angle. That dependence appears to be sensitive to raindrop size. We have developed a three-dimensional polarization-dependent ray-tracing algorithm to calculate the backscatter and the depolarization ratio by large nonspherical droplets. We have applied it to raindrop shapes derived from existing static and dynamic (oscillating) models. We show that many of the observed complex backscatter and depolarization features can be interpreted to a good extent by geometrical optics. These results suggest that there is a definite need for more extensive calculations of the scattering phase matrix elements for large deformed raindrops as functions of the direction of illumination. Obvious applications are retrieval of information on the liquid-solid phase of precipitation and on the size and the vibration state of raindrops.

  4. Drug-protein interactions assessed by fluorescence measurements in the real complexes and in model dyads

    Vayá, Ignacio; Pérez-Ruiz, Raúl; Lhiaubet-Vallet, Virginie; Jiménez, M. Consuelo; Miranda, Miguel A.

    2010-02-01

    In the present work, a systematic fluorescence study on supramolecular systems using two serum albumins (HSA or BSA) as hosts and the nonsteroidal antiinflammatory drugs carprofen (CPF) or naproxen (NPX) as guests has been undertaken. In parallel, model dyads containing Tyr or Trp covalently linked to CPF or NPX have also been investigated. In HSA/(S)-CPF and BSA/(S)-CPF ( λexc = 266 nm), at 1:1 M ratio, an important degree (more than 40%) of singlet-singlet energy transfer (SSET) was observed to take place. The distance ( r) calculated for energy transfer from the SAs to (S)-CPF through a FRET mechanism was found to be ca. 21 Å. In the case of HSA/(S)-NPX and BSA/(S)-NPX, energy transfer occurred to a lower extent (ca. 7%), and r was determined as ca. 24 Å. In order to investigate the possible excited state interactions between bound ligands and the relevant amino acids present in the protein binding sites, four pairs of model dyads were designed and synthesised, namely ( S, S)-TyrCPF, ( S, R)-TyrCPF, ( S, S)-TrpCPF, ( S, R)-TrpCPF, ( S, S)-TyrNPX, ( S, R)-TyrNPX, ( S, S)-TrpNPX and ( S, R)-TrpNPX. A complete SSET was observed from Tyr or Trp to CPF, since no contribution from the amino acids was present in the emission of the dyads. Likewise, a very efficient Tyr or Trp to NPX energy transfer was observed. Remarkably, in ( S, S)-TrpNPX and ( S, R)-TrpNPX a configuration-dependent reduction in the emission intensity was observed, revealing a strong and stereoselective intramolecular quenching. This effect can be attributed to exciplex formation and is dynamic in nature, as the fluorescence lifetimes were much shorter in ( S, R)- and ( S, S)-TrpNPX (1.5 and 3.1 ns, respectively) than in (S)-NPX (11 ns).

  5. Global Monitoring of Terrestrial Chlorophyll Fluorescence from Moderate-spectral-resolution Near-infrared Satellite Measurements: Methodology, Simulations, and Application to GOME-2

    Joiner, J.; Gaunter, L.; Lindstrot, R.; Voigt, M.; Vasilkov, A. P.; Middleton, E. M.; Huemmrich, K. F.; Yoshida, Y.; Frankenberg, C.

    2013-01-01

    Globally mapped terrestrial chlorophyll fluorescence retrievals are of high interest because they can provide information on the functional status of vegetation including light-use efficiency and global primary productivity that can be used for global carbon cycle modeling and agricultural applications. Previous satellite retrievals of fluorescence have relied solely upon the filling-in of solar Fraunhofer lines that are not significantly affected by atmospheric absorption. Although these measurements provide near-global coverage on a monthly basis, they suffer from relatively low precision and sparse spatial sampling. Here, we describe a new methodology to retrieve global far-red fluorescence information; we use hyperspectral data with a simplified radiative transfer model to disentangle the spectral signatures of three basic components: atmospheric absorption, surface reflectance, and fluorescence radiance. An empirically based principal component analysis approach is employed, primarily using cloudy data over ocean, to model and solve for the atmospheric absorption. Through detailed simulations, we demonstrate the feasibility of the approach and show that moderate-spectral-resolution measurements with a relatively high signal-to-noise ratio can be used to retrieve far-red fluorescence information with good precision and accuracy. The method is then applied to data from the Global Ozone Monitoring Instrument 2 (GOME-2). The GOME-2 fluorescence retrievals display similar spatial structure as compared with those from a simpler technique applied to the Greenhouse gases Observing SATellite (GOSAT). GOME-2 enables global mapping of far-red fluorescence with higher precision over smaller spatial and temporal scales than is possible with GOSAT. Near-global coverage is provided within a few days. We are able to show clearly for the first time physically plausible variations in fluorescence over the course of a single month at a spatial resolution of 0.5 deg × 0.5 deg

  6. Global monitoring of terrestrial chlorophyll fluorescence from moderate-spectral-resolution near-infrared satellite measurements: methodology, simulations, and application to GOME-2

    J. Joiner

    2013-10-01

    Full Text Available Globally mapped terrestrial chlorophyll fluorescence retrievals are of high interest because they can provide information on the functional status of vegetation including light-use efficiency and global primary productivity that can be used for global carbon cycle modeling and agricultural applications. Previous satellite retrievals of fluorescence have relied solely upon the filling-in of solar Fraunhofer lines that are not significantly affected by atmospheric absorption. Although these measurements provide near-global coverage on a monthly basis, they suffer from relatively low precision and sparse spatial sampling. Here, we describe a new methodology to retrieve global far-red fluorescence information; we use hyperspectral data with a simplified radiative transfer model to disentangle the spectral signatures of three basic components: atmospheric absorption, surface reflectance, and fluorescence radiance. An empirically based principal component analysis approach is employed, primarily using cloudy data over ocean, to model and solve for the atmospheric absorption. Through detailed simulations, we demonstrate the feasibility of the approach and show that moderate-spectral-resolution measurements with a relatively high signal-to-noise ratio can be used to retrieve far-red fluorescence information with good precision and accuracy. The method is then applied to data from the Global Ozone Monitoring Instrument 2 (GOME-2. The GOME-2 fluorescence retrievals display similar spatial structure as compared with those from a simpler technique applied to the Greenhouse gases Observing SATellite (GOSAT. GOME-2 enables global mapping of far-red fluorescence with higher precision over smaller spatial and temporal scales than is possible with GOSAT. Near-global coverage is provided within a few days. We are able to show clearly for the first time physically plausible variations in fluorescence over the course of a single month at a spatial resolution of 0

  7. Measurements with magnetic field in the National Spherical Torus Experiment using the motional Stark effect with laser induced fluorescence diagnostic

    Foley, E. L.; Levinton, F. M. [Nova Photonics, Inc., Princeton, New Jersey 08540 (United States)

    2013-04-15

    The motional Stark effect with laser-induced fluorescence diagnostic (MSE-LIF) has been installed and tested on the National Spherical Torus Experiment (NSTX) at the Princeton Plasma Physics Lab. The MSE-LIF diagnostic will be capable of measuring radially resolved profiles of magnetic field magnitude or pitch angle in NSTX plasmas. The system includes a diagnostic neutral hydrogen beam and a laser which excites the n = 2 to n = 3 transition. A viewing system has been implemented which will support up to 38 channels from the plasma edge to past the magnetic axis. First measurements of MSE-LIF signals in the presence of small applied magnetic fields in neutral gas are reported.

  8. Measurements with magnetic field in the National Spherical Torus Experiment using the motional Stark effect with laser induced fluorescence diagnostic

    Foley, E. L.; Levinton, F. M.

    2013-04-01

    The motional Stark effect with laser-induced fluorescence diagnostic (MSE-LIF) has been installed and tested on the National Spherical Torus Experiment (NSTX) at the Princeton Plasma Physics Lab. The MSE-LIF diagnostic will be capable of measuring radially resolved profiles of magnetic field magnitude or pitch angle in NSTX plasmas. The system includes a diagnostic neutral hydrogen beam and a laser which excites the n = 2 to n = 3 transition. A viewing system has been implemented which will support up to 38 channels from the plasma edge to past the magnetic axis. First measurements of MSE-LIF signals in the presence of small applied magnetic fields in neutral gas are reported.

  9. Fluorescence measurements show stronger cold inhibition of photosynthetic light reactions in Scots pine compared to Norway spruce as well as during spring compared to autumn.

    Linkosalo, Tapio; Heikkinen, Juha; Pulkkinen, Pertti; Mäkipää, Raisa

    2014-01-01

    We studied the photosynthetic activity of Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies [L.] Karst) in relation to air temperature changes from March 2013 to February 2014. We measured the chlorophyll fluorescence of approximately 50 trees of each species growing in southern Finland. Fluorescence was measured 1-3 times per week. We began by measuring shoots present in late winter (i.e., March 2013) before including new shoots once they started to elongate in spring. By July, when the spring shoots had achieved similar fluorescence levels to the older ones, we proceeded to measure the new shoots only. We analyzed the data by fitting a sigmoidal model containing four parameters to link sliding averages of temperature and fluorescence. A parameter defining the temperature range over which predicted fluorescence increased most rapidly was the most informative with in describing temperature dependence of fluorescence. The model generated similar fluorescence patterns for both species, but differences were observed for critical temperature and needle age. Down regulation of the light reaction was stronger in spring than in autumn. Pine showed more conservative control of the photosynthetic light reactions, which were activated later in spring and more readily attenuated in autumn. Under the assumption of a close correlation of fluorescence and photosynthesis, spruce should therefore benefit more than pine from the increased photosynthetic potential during warmer springs, but be more likely to suffer frost damage with a sudden cooling following a warm period. The winter of 2013-2014 was unusually mild and similar to future conditions predicted by global climate models. During the mild winter, the activity of photosynthetic light reactions of both conifers, especially spruce, remained high. Because light levels during winter are too low for photosynthesis, this activity may translate to a net carbon loss due to respiration.

  10. Fluorescence measurements show stronger cold inhibition of photosynthetic light reactions in Scots pine compared to Norway spruce as well as during spring compared to autumn

    Tapio eLinkosalo

    2014-06-01

    Full Text Available We studied the photosynthetic activity of Scots pine (Pinus sylvestris L. and Norway spruce (Picea abies [L.] Karst in relation to air temperature changes from March 2013 to February 2014. We measured the chlorophyll fluorescence of approximately 50 trees of each species growing in southern Finland. Fluorescence was measured 13 times per week. We began by measuring shoots present in late winter (i.e., March 2013 before including new shoots once they started to elongate in spring. By July, when the spring shoots had achieved similar fluorescence levels to the older ones, we proceeded to measure the new shoots only.We analysed the data by fitting a sigmoidal model containing four parameters to link sliding averages of temperature and fluorescence. A parameter defining the temperature range over which predicted fluorescence increased most rapidly was the most informative with in describing temperature dependence of fluorescence.The model generated similar fluorescence patterns for both species, but differences were observed for critical temperature and needle age. Down regulation of the light reaction was stronger in spring than in autumn. Pine showed more conservative control of the photosynthetic light reactions, which were activated later in spring and more readily attenuated in autumn. Under the assumption of a close correlation of fluorescence and photosynthesis, spruce should therefore benefit more than pine from the increased photosynthetic potential during warmer springs, but be more likely to suffer frost damage with a sudden cooling following a warm period. The winter of 20132014 was unusually mild and similar to future conditions predicted by global warming models. During the mild winter, the activity of photosynthetic light reactions of both conifers, especially spruce, remained high. Because light levels during winter are too low for photosynthesis, this activity may translate to a net carbon loss due to respiration.

  11. A comparison of ion beam measurements by retarding field energy analyzer and laser induced fluorescence in helicon plasma devices

    Gulbrandsen, N., E-mail: njal.gulbrandsen@uit.no; Fredriksen, Å. [Department of Physics and Technology, UiT The Arctic University of Norway, 9037 Tromsø (Norway); Carr, J. [Department of Physics and Astronomy, West Virginia University, Morgantown, West Virginia 26506 (United States); Department of Physics, Texas Lutheran University, Seguin, Texas 78155 (United States); Scime, E. [Department of Physics and Astronomy, West Virginia University, Morgantown, West Virginia 26506 (United States)

    2015-03-15

    Both Laser-Induced Fluorescence (LIF) and Retarding Field Energy Analyzers (RFEA) have been applied to the investigation of beams formed in inductively coupled helicon plasmas. While the LIF technique provides a direct measurement of the velocity distribution in the plasma, the RFEA measures ion flux as a function of a retarding potential. In this paper, we present a method to compare the two techniques, by converting the LIF velocity distribution to an equivalent of a RFEA measurement. We applied this method to compare new LIF and RFEA measurements in two different experiments; the Hot Helicon Experiment (HELIX) - Large Experiment on Instabilities and Anisotropies (LEIA) at West Virginia University and Njord at University of Tromsø. We find good agreement between beam energies of the two methods. In agreement with earlier observations, the RFEA is found to measure ion beams with densities too low for the LIF to resolve. In addition, we present measurements of the axial development of the ion beam in both experiments. Beam densities drop exponentially with distance from the source, both in LIF and RFEA measurements. The effective quenching cross section from LIF in LEIA is found to be σ{sub b,*}=4×10{sup −19} m{sup 2}, and the effective beam collisional cross sections by RFEA in Njord to be σ{sub b}=1.7×10{sup −18} m{sup 2}.

  12. Determination of the mass attenuation coefficients for X-ray fluorescence measurements correction by the Rayleigh to Compton scattering ratio

    Conti, C.C., E-mail: ccconti@ird.gov.br [Institute for Radioprotection and Dosimetry – IRD/CNEN, Rio de Janeiro (Brazil); Physics Institute, State University of Rio de Janeiro – UERJ, Rio de Janeiro (Brazil); Anjos, M.J. [Physics Institute, State University of Rio de Janeiro – UERJ, Rio de Janeiro (Brazil); Salgado, C.M. [Nuclear Engineering Institute – IEN/CNEN, Rio de Janeiro (Brazil)

    2014-09-15

    Highlights: •This work describes a procedure for sample self-absorption correction. •The use of Monte Carlo simulation to calculate the mass attenuation coefficients curve was effective. •No need for transmission measurement, saving time, financial resources and effort. •This article provides de curves for the 90° scattering angle. •Calculation on-line at (www.macx.net.br). -- Abstract: X-ray fluorescence technique plays an important role in nondestructive analysis nowadays. The development of equipment, including portable ones, enables a wide assortment of possibilities for analysis of stable elements, even in trace concentrations. Nevertheless, despite of the advantages, one important drawback is radiation self-attenuation in the sample being measured, which needs to be considered in the calculation for the proper determination of elemental concentration. The mass attenuation coefficient can be determined by transmission measurement, but, in this case, the sample must be in slab shape geometry and demands two different setups and measurements. The Rayleigh to Compton scattering ratio, determined from the X-ray fluorescence spectrum, provides a link to the mass attenuation coefficient by means of a polynomial type equation. This work presents a way to construct a Rayleigh to Compton scattering ratio versus mass attenuation coefficient curve by using the MCNP5 Monte Carlo computer code. The comparison between the calculated and literature values of the mass attenuation coefficient for some known samples showed to be within 15%. This calculation procedure is available on-line at (www.macx.net.br)

  13. Airborne In-Situ Measurements of Formaldehyde Over California: First Results from the Compact Formaldehyde Fluorescence Experiment (COFFEE) Instrument

    Marrero, Josette Elizabeth; Saint Clair, Jason; Yates, Emma L.; Gore, Warren; Swanson, Andrew K.; Iraci, Laura T.; Hanisco, Thomas F.

    2016-01-01

    Formaldehyde (HCHO) is one of the most abundant oxygenated volatile organic compounds (VOCs) in the atmosphere, playing a role multiple atmospheric processes. Measurements of HCHO can be used to help quantify convective transport, the abundance of VOCs, and ozone production in urban environments. The Compact Formaldehyde FluorescencE Experiment (COFFEE) instrument uses Non-Resonant Laser Induced Fluorescence (NR-LIF) to detect trace concentrations of HCHO as part of the Alpha Jet Atmospheric eXperiment (AJAX) payload. Developed at NASA GSFC, COFFEE is a small, low maintenance instrument with a sensitivity of 100 pptv and a quick response time (1 sec). The COFFEE instrument has been customized to fit in an external wing pod on the Alpha Jet aircraft based at NASA ARC. The instrument can operate over a broad range of altitudes, from boundary layer to lower stratosphere, making it well suited for the Alpha Jet, which can access altitudes from the surface up to 40,000 ft. Results of the first COFFEE science flights preformed over the California's Central Valley will be presented. Boundary layer measurements and vertical profiles in the tropospheric column will both be included. This region is of particular interest, due to its elevated levels of HCHO, revealed in satellite images, as well as its high ozone concentrations. In addition to HCHO, the AJAX payload includes measurements of atmospheric ozone, methane, and carbon dioxide. Formaldehyde is one of the few urban pollutants that can be measured from space. Plans to compare in-situ COFFEE data with satellite-based HCHO observations such as those from OMI (Aura) and OMPS (SuomiNPP) will also be presented.

  14. Hazardous metals in vintage plastic toys measured by a handheld X-ray fluorescence spectrometer.

    Miller, Gillian Zaharias; Harris, Zoe E

    2015-01-01

    Over 100 plastic toys from the 1970s and 1980s, both polyvinyl chloride ("vinyl") and nonvinyl, were analyzed in the study described here using a handheld X-ray fluorescence spectrometer to quantify hazardous metal content. A sampling of recent vinyl toys was also tested. The majority of nonvinyl samples were Fisher Price brand toys. The vinyl toys consisted largely of Barbie dolls and other dolls. Overall, lead or cadmium was found in 67% of vintage plastic toys, frequently at concentrations exceeding current U.S. and European limits. Arsenic was detected at levels of concern in 16% of the samples. In the nonvinyl toys, heavy metal content was found to correlate with certain colors of plastic. The likely sources of the detected metals are discussed. None of the contemporary vinyl toys contained detectable cadmium, lead, or arsenic. Given that vintage toys remain in widespread use by children in homes and other locations, the results illuminate a potential source of heavy metal exposure for children.

  15. Distribution of Fe atom density in a dc magnetron sputtering plasma source measured by laser-induced fluorescence imaging spectroscopy

    Shibagaki, K.; Nafarizal, N.; Sasaki, K.; Toyoda, H.; Iwata, S.; Kato, T.; Tsunashima, S.; Sugai, H.

    2003-10-01

    Magnetron sputtering discharge is widely used as an efficient method for thin film fabrication. In order to achieve the optimized fabrication, understanding of the kinetics in plasmas is essential. In the present work, we measured the density distribution of sputtered Fe atoms using laser-induced fluorescence imaging spectroscopy. A dc magnetron plasma source with a Fe target was used. An area of 20 × 2 mm in front of the target was irradiated by a tunable laser beam having a planar shape. The picture of laser-induced fluorescence on the laser beam was taken using an ICCD camera. In this way, we obtained the two-dimensional image of the Fe atom density. As a result, it has been found that the Fe atom density observed at a distance of several centimeters from the target is higher than that adjacent to the target, when the Ar gas pressure was relatively high. It is suggested from this result that some gas-phase production processes of Fe atoms are available in the plasma. This work has been performed under the 21st Century COE Program by the Ministry of Education, Culture, Sports, Science and Technology in Japan.

  16. Depolarization due to the resonance tail during a fast resonance jump

    Ruth, R.D.

    1980-01-01

    The mechanism of depolarization due to a fast resonance jump is studied. The dominant effect for cases of interest is not dependent on the rate of passage through resonance, but rather on the size of the resonance jump as compared to the width, epsilon, of the resonance. The results are applied to a calculation of depolarization in the AGS at Brookhaven National Laboratory

  17. Dependence of negative muon depolarization on molecular weight and temperature in organic compounds

    Djuraev, A.A.; Evseev, V.S.; Obukhov, Yu.V.; Roganov, V.S.

    2009-01-01

    An atomic capture of negative muons in the aliphatic spirit series, the dependence of muon rest polarization on the molecular weight of spirit have been studied. The temperature dependence of depolarization in benzole and styrene has been obtained. The results on depolarization are being interpreted basing on notions about chemical interactions of mesic atoms in organic compounds. (author)

  18. Simple non-Markovian microscopic models for the depolarizing channel of a single qubit

    Fonseca Romero, K M; Lo Franco, R

    2012-01-01

    The archetypal one-qubit noisy channels - depolarizing, phase-damping and amplitude-damping channels - describe both Markovian and non-Markovian evolution. Simple microscopic models for the depolarizing channel, both classical and quantum, are considered. Microscopic models that describe phase-damping and amplitude-damping channels are briefly reviewed.

  19. Modulation of electromagnetic fields by a depolarizer of random polarizer array

    Ma, Ning; Hanson, Steen Grüner; Wang, Wei

    2016-01-01

    The statistical properties of the electric fields with random changes of the polarization state in space generated by a depolarizer are investigated on the basis of the coherence matrix. The depolarizer is a polarizer array composed of a multitude of contiguous square cells of polarizers with ran......The statistical properties of the electric fields with random changes of the polarization state in space generated by a depolarizer are investigated on the basis of the coherence matrix. The depolarizer is a polarizer array composed of a multitude of contiguous square cells of polarizers...... with randomly distributed polarization angles, where the incident fields experience a random polarization modulation after passing through the depolarizer. The propagation of the modulated electric fields through any quadratic optical system is examined within the framework of the complex ABCD matrix to show...

  20. Depolarization in the elastic scattering of 17 MeV polarized protons from 9Be

    Baker, M.P.

    1975-01-01

    The Wolfenstein depolarization parameter D(theta) was measured for the elastic scattering of 17-MeV protons from 9 Be at laboratory scattering angles between 70 0 and 120 0 in 10 0 steps with uncertainties ranging from 0.05 to 0.07. The reaction was initiated by polarized protons and the polarization of those protons elastically scattered by the 9 Be analyzed using a high-resolution, silicon polarimeter. Several of the measured values of D(theta) differed significantly from unity, indicating non-zero probability for proton spin-flip in the elastic scattering process. Theoretical estimates of the depolarization-parameter angular distribution have been made using a multipole expansion of the elastic-scattering amplitude in terms of the amount of angular momentum transferred to the target nucleus during the scattering process. Here the J = 0, 1 and 2 contributions to the scattering amplitude have been explicitly treated for the scattering from 9 Be(I = 3 / 2 ). The J = 0 terms are calculated using the standard, spherical optical-model. The J = 1 and 2 terms can be calculated using DWBA. Both spherical and tensor forms are considered for the J = 1 interaction. The spin-flip probabilities predicted assuming reasonable strengths for the J = 1 potentials are much smaller than those observed experimentally. The J = 2 contribution to the spin-flip probability is calculated assuming a rotational model for 9 Be. Predictions of the J = 2, elastic spin-flip probability are substantially larger than the predictions for the J = 1 contribution and are in rough agreement with the present data. The results of recent coupled-channels calculations also support the conclusion that large elastic spin-flip probabilities can be produced by the J = 2 term in the elastic scattering amplitude

  1. Depolarization of the electron spin in storage rings by nonlinear spin-orbit coupling

    Kewisch, J.

    1985-10-01

    Electrons and positrons which circulate in the storage ring are polarized at the emission of synchrotron radiation by the so called Sokolov-Ternov effect. This polarization is on the one hand of large interest for the study of the weak interaction, on the other hand it can be used for the accurate measurement of the beam energy and by this of the mass of elementary particles. The transverse and longitudinal particle vibrations simultaneously excited by the synchrotron radiation however can effect that this polarization is destroyed. This effect is called spin-orbit coupling. For the calculation of the spin-orbit coupling the computer program SITROS was written. This program is a tracking program: The motion of some sample particles and their spin vectors are calculated for some thousand circulations. From this the mean depolarization and by extrapolation the degree of polarization of the equilibrium state is determined. Contrarily to the known program SLIM which is based on perturbational calculations in SITROS the nonlinear forces in the storage ring can be regarded. By this the calculation of depolarizing higher order resonances is made possible. In this thesis the equations of motion for the orbital and spin motion of the electrons are derived which form the base for the program SITROS. The functions of the program and the approximations necessary for the saving of calculational time are explained. The comparison of the SITROS results with the measurement results obtained at the PETRA storage ring shows that the SITROS program is a useful means for the planning and calculation of storage rings with polarized electron beams. (orig.) [de

  2. Depolarization changes during acute myocardial ischemia by evaluation of QRS slopes: standard lead and vectorial approach.

    Romero, Daniel; Ringborn, Michael; Laguna, Pablo; Pahlm, Olle; Pueyo, Esther

    2011-01-01

    Diagnosis and risk stratification of patients with acute coronary syndromes can be improved by adding information from the depolarization phase (QRS complex) to the conventionally used ST-T segment changes. In this study, ischemia-induced changes in the main three slopes of the QRS complex, upward ( ℑ(US)) and downward ( ℑ(DS) ) slopes of the R wave as well as the upward ( ℑ(TS)) slope of the terminal S wave, were evaluated as to represent a robust measure of pathological changes within the depolarization phase. From ECG recordings both in a resting state (control recordings) and during percutaneous coronary intervention (PCI)-induced transmural ischemia, we developed a method for quantification of ℑ(US), ℑ(DS), and ℑ(TS) that incorporates dynamic ECG normalization so as to improve the sensitivity in the detection of ischemia-induced changes. The same method was also applied on leads obtained by projection of QRS loops onto their dominant directions. We show that ℑ(US), ℑ(DS), and ℑ(TS) present high stability in the resting state, thus providing a stable reference for ischemia characterization. Maximum relative factors of change ( ℜ(ℑ)) during PCI were found in leads derived from the QRS loop, reaching 10.5 and 13.7 times their normal variations in the control for ℑ(US) and ℑ(DS), respectively. For standard leads, the relative factors of change were 6.01 and 9.31. The ℑ(TS) index presented a similar behavior to that of ℑ(DS). The timing for the occurrence of significant changes in ℑ(US) and ℑ(DS) varied with lead, ranging from 30 s to 2 min after initiation of coronary occlusion. In the present ischemia model, relative ℑ(DS) changes were smaller than ST changes in most leads, however with only modest correlation between the two indices, suggesting they present different information about the ischemic process. We conclude that QRS slopes offer a robust tool for evaluating depolarization changes during myocardial ischemia.

  3. Exposure measurements on portable X-ray fluorescence spectrometers (XRF); Expositionsmessungen an mobilen Roentgenfluoreszenz-Spektrometern

    Boernsen, Frank; Ludwig, Thomas [Berufsgenossenschaft Energie Textil Elektro Medienerzeugnisse (BG ETEM), Koeln (Germany). Fachbereich Strahlenschutz; Hoewekenmeier, Dirk; Reinhardt, Erich [Bezirksregierung Koeln (Germany). Dezernat 55 - Strahlenschutz

    2011-07-01

    Portable XRF are more and more used for the verification of alloy in miscellaneous materials. Dose rates of five portable XRF were measured with thermoluminescent dose meters in combination with an Alderson phantom. At operating parameters of 40 kV and 50 {mu}A, for example, an extremely high dose rate of 76 Sv/h in the primary beam had been determined. The measurements, the results and the consequences for protection measures will be presented and discussed. (orig.)

  4. Determination of K shell absorption jump factors and jump ratios of 3d transition metals by measuring K shell fluorescence parameters.

    Kaçal, Mustafa Recep; Han, İbrahim; Akman, Ferdi

    2015-01-01

    Energy dispersive X-ray fluorescence technique (EDXRF) has been employed for measuring K-shell absorption jump factors and jump ratios for Ti, Cr, Fe, Co, Ni and Cu elements. The jump factors and jump ratios for these elements were determined by measuring K shell fluorescence parameters such as the Kα X-ray production cross-sections, K shell fluorescence yields, Kβ-to-Kα X-rays intensity ratios, total atomic absorption cross sections and mass attenuation coefficients. The measurements were performed using a Cd-109 radioactive point source and an Si(Li) detector in direct excitation and transmission experimental geometry. The measured values for jump factors and jump ratios were compared with theoretically calculated and the ones available in the literature. Copyright © 2014 Elsevier Ltd. All rights reserved.

  5. Using fluorescence measurement of zinc ions liberated from ZnS nanoparticle labels in bioassay for Escherichia coli O157:H7

    Cowles, Chad L.; Zhu Xiaoshan; Pai, Chi-Yun

    2011-01-01

    In this study, an alternative approach using ZnS nanoparticle biolabels as fluorescence signal transducers is reported for the immunoassay of E. coli O157:H7 in tap water samples. Instead of measuring the fluorescence of ZnS nanoparticles in the assay, the fluorescence signal is generated through the binding of zinc ions released from nanoparticle labels with zinc-ion sensitive fluorescence indicator Fluozin-3. In the assay, ZnS nanoparticles around 50 nm in diameter were synthesized, bioconjugated, and applied for the detection of E. coli O157:H7. The assay shows a detection range over two orders of magnitude and a detection limit around 1000 colony-forming units (cfu) of E. coli O157:H7.

  6. Using Continuous In-situ Measurement of Fluorescence to Reveal Hot Spots and Hot Moments of Dissolved Organic Matter Dynamics in a Forested Watershed

    Ryan, K. A.; Hosen, J. D.; Raymond, P. A.; Stubbins, A.; Shanley, J. B.

    2017-12-01

    River systems serve as net carbon exporters from land to the ocean, fueling downstream aquatic ecosystem food webs. Fluorescence signatures of aquatic organic matter can be used as a proxy for dissolved organic carbon (DOC) concentration and can characterize DOC composition, reactivity, and source to improve our understanding of ecological processes. In-situ measurement of fluorescence using fifteen-minute interval data logging allows greater temporal resolution than laboratory studies. However, in-situ data must be corrected for interferences from temperature, absorbance and turbidity changes occurring in the field. We installed multiparameter water quality sondes (Eureka Mantas) and in-situ fluorometers (Turner Designs Cyclops) at sites nested within streams and riparian zones in the Sleepers River Research Watershed in Vermont in 2017. We coupled these measurements with simultaneous intensive field sampling campaigns and laboratory analysis of DOC and fluorescence Excitation-Emission Matrices. The data loggers from the nested sites recorded fluorescence peaks responding to discharge events and tracked changes in fluorescence occurring from upstream to downstream sites. Laboratory results confirm a nonlinear, hysteretic relationship between discharge and DOC where peak DOC lags peak discharge. This hysteresis is predicted to be controlled by multiple flow paths and DOC sources (i.e. groundwater, overland flow). We conclude that continuous in-situ records of river water fluorescence can be used to inform ecological processes and test new hypotheses concerning dissolved organic matter dynamics in watersheds.

  7. Use of NAD(P)H fluorescence measurement for on-line monitoring of metabolic state of Azohydromonas australica in poly(3-hydroxybutyrate) production.

    Gahlawat, Geeta; Srivastava, Ashok K

    2013-02-01

    Culture fluorescence measurement is an indirect and non-invasive method of biomass estimation to assess the metabolic state of the microorganism in a fermentation process. In the present investigation, NAD(P)H fluorescence has been used for on-line in situ characterization of metabolic changes occurring during different phases of batch cultivation of Azohydromonas australica in growth associated poly(3-hydroxybutyrate) or PHB production. A linear correlation between biomass concentration and net NAD(P)H fluorescence was obtained during early log phase (3-12 h) and late log phase (24-39 h) of PHB fermentation. After 12 h (mid log phase) cultivation PHB accumulation shot up and a drop in culture fluorescence was observed which synchronously exhibited continuous utilization of NAD(P)H for the synthesis of biomass and PHB formation simultaneously. A decrease in the observed net fluorescence value was observed again towards the end of fermentation (at 39 h) which corresponded very well with the culture starvation and substrate depletion towards the end of cultivation inside the bioreactor. It was therefore concluded that NAD(P)H fluorescence measurements could be used for indication of the time of fresh nutrient (substrate) feed during substrate limitation to further enhance the PHB production.

  8. Do the fluorescent red eyes of the marine fish Tripterygion delaisi stand out? In situ and in vivo measurements at two depths.

    Harant, Ulrike K; Santon, Matteo; Bitton, Pierre-Paul; Wehrberger, Florian; Griessler, Thomas; Meadows, Melissa G; Champ, Connor M; Michiels, Nico K

    2018-05-01

    Since the discovery of red fluorescence in fish, much effort has been invested to elucidate its potential functions, one of them being signaling. This implies that the combination of red fluorescence and reflection should generate a visible contrast against the background. Here, we present in vivo iris radiance measurements of Tripterygion delaisi under natural light conditions at 5 and 20 m depth. We also measured substrate radiance of shaded and exposed foraging sites at those depths. To assess the visual contrast of the red iris against these substrates, we used the receptor noise model for chromatic contrasts and Michelson contrast for achromatic calculations. At 20 m depth, T. delaisi iris radiance generated strong achromatic contrasts against substrate radiance, regardless of exposure, and despite substrate fluorescence. Given that downwelling light above 600 nm is negligible at this depth, we can attribute this effect to iris fluorescence. Contrasts were weaker in 5 m. Yet, the pooled radiance caused by red reflection and fluorescence still exceeded substrate radiance for all substrates under shaded conditions and all but Jania rubens and Padina pavonia under exposed conditions. Due to the negative effects of anesthesia on iris fluorescence, these estimates are conservative. We conclude that the requirements to create visual brightness contrasts are fulfilled for a wide range of conditions in the natural environment of T. delaisi .

  9. Dual-channel red/blue fluorescence dosimetry with broadband reflectance spectroscopic correction measures protoporphyrin IX production during photodynamic therapy of actinic keratosis

    Kanick, Stephen Chad; Davis, Scott C.; Zhao, Yan; Hasan, Tayyaba; Maytin, Edward V.; Pogue, Brian W.; Chapman, M. Shane

    2014-07-01

    Dosimetry for aminolevulinic acid (ALA)-induced protoporphyrin IX (PpIX) photodynamic therapy of actinic keratosis was examined with an optimized fluorescence dosimeter to measure PpIX during treatment. While insufficient PpIX generation may be an indicator of incomplete response, there exists no standardized method to quantitate PpIX production at depths in the skin during clinical treatments. In this study, a spectrometer-based point probe dosimeter system was used to sample PpIX fluorescence from superficial (blue wavelength excitation) and deeper (red wavelength excitation) tissue layers. Broadband white light spectroscopy (WLS) was used to monitor aspects of vascular physiology and inform a correction of fluorescence for the background optical properties. Measurements in tissue phantoms showed accurate recovery of blood volume fraction and reduced scattering coefficient from WLS, and a linear response of PpIX fluorescence versus concentration down to 1.95 and 250 nM for blue and red excitations, respectively. A pilot clinical study of 19 patients receiving 1-h ALA incubation before treatment showed high intrinsic variance in PpIX fluorescence with a standard deviation/mean ratio of >0.9. PpIX fluorescence was significantly higher in patients reporting higher pain levels on a visual analog scale. These pilot data suggest that patient-specific PpIX quantitation may predict outcome response.

  10. Measuring of electric fields with laser-induced fluorescence-dip Stark spectroscopy

    Wagenaars, E.; Bowden, M.D.; Kroesen, G.M.W.

    2007-01-01

    The electric field is an important quantity in low-pressure gas discharges, driving many fundamental processes. Unfortunately, it is difficult to measure electric field distributions in plasmas directly. The goal of this research was to develop a diagnostic technique to measure electric fields in

  11. Setting-up of the Laser Induced Fluorescence diagnostic. Measurements of Cr density in a neon glow discharge

    Tafalla, D.; Cal, E. de la; Tabares, F. L.

    1994-01-01

    A plasma diagnostic based on the Laser Induced Fluorescence (LIF) technique has been set up in the Fusion Division at the CIEMAT. In a preliminary experiment, the density of sputtered chromium atoms produced in a neon glow discharge was measured. Firstly, the laser beam was characterized by calibration of its wavelength, bandwidth and energy profile and Rayleigh scattering in N2 was used for the optical system calibration. An absolute density of Cr atoms of n ∼ 5x10 cm was obtained in discharges at 100 mA and pressure of 15 mTorr and a linear dependence of the LIF signal us. current was found. These values are in agreement with those expected from the tabulated sputtering yields and the thermalization and diffusion of the sputtered atoms into the Ne plasma. (Author) 19 refs

  12. Setting-up of the Laser Induced Fluorescence diagnostic. Measurements of Cr density in a neon glow discharge

    Tafalla, D.; Cal, E. de la; Tabares, F.L.

    1994-01-01

    A plasma diagnostic based on the Laser Induced Fluorescence (LIF) technique has been set up in the Fusion Division at the CIEMAT. In a preliminary experiment, The density of sputtered chromium atoms produced in a neon glow discharge was measured. Firstly, the laser beam was characterized by calibration of its wavelength bandwidth and energy profile and Rayleigh scattering in N 2 was used for the optical system calibration. An absolute density of Cr atoms of n= 5x10''9 cm''-3 was obtained in discharges at 100 mA and pressure of 15 mTorr and a linear dependence of the LIF signal US. current was found. These values are in agreement with those expected from the tabulated sputtering yields and the thermalization and diffusion of the sputtered atoms into the Ne plasma

  13. Measurement of a heavy-hole hyperfine interaction in InGaAs quantum dots using resonance fluorescence.

    Fallahi, P; Yilmaz, S T; Imamoğlu, A

    2010-12-17

    We measure the strength and the sign of hyperfine interaction of a heavy hole with nuclear spins in single self-assembled quantum dots. Our experiments utilize the locking of a quantum dot resonance to an incident laser frequency to generate nuclear spin polarization. By monitoring the resulting Overhauser shift of optical transitions that are split either by electron or exciton Zeeman energy with respect to the locked transition using resonance fluorescence, we find that the ratio of the heavy-hole and electron hyperfine interactions is -0.09 ± 0.02 in three quantum dots. Since hyperfine interactions constitute the principal decoherence source for spin qubits, we expect our results to be important for efforts aimed at using heavy-hole spins in quantum information processing.

  14. Analytical Energy Dispersive X-Ray Fluorescence Measurements with a Scanty Amounts of Plant and Soil Materials

    Mittal, R.; Rao, P.; Kaur, P.

    2018-01-01

    Elemental evaluations in scanty powdered material have been made using energy dispersive X-ray fluorescence (EDXRF) measurements, for which formulations along with specific procedure for sample target preparation have been developed. Fractional amount evaluation involves an itinerary of steps; (i) collection of elemental characteristic X-ray counts in EDXRF spectra recorded with different weights of material, (ii) search for linearity between X-ray counts and material weights, (iii) calculation of elemental fractions from the linear fit, and (iv) again linear fitting of calculated fractions with sample weights and its extrapolation to zero weight. Thus, elemental fractions at zero weight are free from material self absorption effects for incident and emitted photons. The analytical procedure after its verification with known synthetic samples of macro-nutrients, potassium and calcium, was used for wheat plant/ soil samples obtained from a pot experiment.

  15. Curve fitting using a genetic algorithm for the X-ray fluorescence measurement of lead in bone

    Luo, L.; McMaster University, Hamilton; Chettle, D.R.; Nie, H.; McNeill, F.E.; Popovic, M.

    2006-01-01

    We investigated the potential application of the genetic algorithm in the analysis of X-ray fluorescence spectra from measurement of lead in bone. Candidate solutions are first designed based on the field knowledge and the whole operation, evaluation, selection, crossover and mutation, is then repeated until a given convergence criterion is met. An average-parameters based genetic algorithm is suggested to improve the fitting precision and accuracy. Relative standard deviation (RSD%) of fitting amplitude, peak position and width is 1.3-7.1, 0.009-0.14 and 1.4-3.3, separately. The genetic algorithm was shown to make a good resolution and fitting of K lines of Pb and γ elastic peaks. (author)

  16. Distribution of lead in lead-accumulating pteridophyte Blechnum niponicum, measured by synchrotron radiation micro X-ray fluorescence

    Kodera, Hirofumi; Nishioka, Hiroshi; Muramatsu, Yasuji; Terada, Yasuko

    2008-01-01

    The distribution of lead (Pb) accumulated in the pteridophyte Blechnum niponicum, a Pb-hyperaccumulator, was measured using synchrotron-radiation micro X-ray fluorescence (SR-μ-XRF) at BL37XU of SPring-8. From two dimensional (2D) imagings of Pb at the root, petiole, leaf vein, pinna epidermis and sorus in the Blechnum niponicum, the mechanism for the transportation and accumulation of Pb can be suggested to be as follows: Lead is accumulated in conductive tissues. Most of the Pb solubilized in the rhizosphere is fixed in the conductive tissue, with the remainder being transported with the transpiration stream to the above-ground parts of the plant. Lead transported to the upper parts of the plant ultimately remains at the terminal points of the transpiration stream, including the stomatal apparatus and water pores; it was shown that these sections contain high concentrations of Pb. (author)

  17. Sinking towards destiny: High throughput measurement of phytoplankton sinking rates through time-resolved fluorescence plate spectroscopy.

    Bannon, Catherine C; Campbell, Douglas A

    2017-01-01

    Diatoms are marine primary producers that sink in part due to the density of their silica frustules. Sinking of these phytoplankters is crucial for both the biological pump that sequesters carbon to the deep ocean and for the life strategy of the organism. Sinking rates have been previously measured through settling columns, or with fluorimeters or video microscopy arranged perpendicularly to the direction of sinking. These side-view techniques require large volumes of culture, specialized equipment and are difficult to scale up to multiple simultaneous measures for screening. We established a method for parallel, large scale analysis of multiple phytoplankton sinking rates through top-view monitoring of chlorophyll a fluorescence in microtitre well plates. We verified the method through experimental analysis of known factors that influence sinking rates, including exponential versus stationary growth phase in species of different cell sizes; Thalassiosira pseudonana CCMP1335, chain-forming Skeletonema marinoi RO5A and Coscinodiscus radiatus CCMP312. We fit decay curves to an algebraic transform of the decrease in fluorescence signal as cells sank away from the fluorometer detector, and then used minimal mechanistic assumptions to extract a sinking rate (m d-1) using an RStudio script, SinkWORX. We thereby detected significant differences in sinking rates as larger diatom cells sank faster than smaller cells, and cultures in stationary phase sank faster than those in exponential phase. Our sinking rate estimates accord well with literature values from previously established methods. This well plate-based method can operate as a high throughput integrative phenotypic screen for factors that influence sinking rates including macromolecular allocations, nutrient availability or uptake rates, chain-length or cell size, degree of silification and progression through growth stages. Alternately the approach can be used to phenomically screen libraries of mutants.

  18. Measurements of serum non-ceruloplasmin copper by a direct fluorescent method specific to Cu(II).

    Squitti, Rosanna; Siotto, Mariacristina; Cassetta, Emanuele; El Idrissi, Imane Ghafir; Colabufo, Nicola A

    2017-08-28

    Meta-analyses indicated the breakdown of copper homeostasis in the sporadic form of Alzheimer's disease (AD), comprising copper decreases within the brain and copper increases in the blood and the pool not bound to ceruloplasmin (non-Cp Cu, also known in the literature as "free" copper). The calculated non-Cp Cu (Walshe's) index has many limitations. A direct fluorescent method for non-Cp Cu detection has been developed and data are presented herein. The study included samples from 147 healthy subjects, 36 stable mild cognitive impairment (MCI) and 89 AD patients, who were tested for non-Cp Cu through the direct method, total serum copper, ceruloplasmin concentration and o-dianisidine ceruloplasmin activity. The indirect non-Cp Cu Walshe's index was also calculated. The direct method was linear (0.9-5.9 μM), precise (within-laboratory coefficient variation of 9.7% for low and 7.1% for high measurements), and had a good recovery. A reference interval (0-1.9 μM) was determined parametrically in 147 healthy controls (27-84 years old). The variation of non-Cp Cu was evaluated according to age and sex. Non-Cp Cu was 1.5 times higher in AD patients (regarding the upper value of the reference interval) than in healthy controls. Healthy, MCI and AD subjects were differentiated through the direct non-Cp Cu method [areas under the curve (AUC)=0.755]. Considering a 95% specificity and a 1.91 μmol/L cut-off, the sensitivity was 48.3% (confidence interval 95%: 38%-58%). The likelihood ratio (LR) was 9.94 for positive test results (LR+) and 0.54 for negative test result (LR-). The direct fluorescent test reliably and accurately measures non-Cp Cu, thereby determining the probability of having AD.

  19. Measurements of excited-state-to-excited-state transition probabilities and photoionization cross-sections using laser-induced fluorescence and photoionization signals

    Shah, M.L.; Sahoo, A.C.; Pulhani, A.K.; Gupta, G.P.; Dikshit, B.; Bhatia, M.S.; Suri, B.M.

    2014-01-01

    Laser-induced photoionization and fluorescence signals were simultaneously observed in atomic samarium using Nd:YAG-pumped dye lasers. Two-color, three-photon photoionization and two-color fluorescence signals were recorded simultaneously as a function of the second-step laser power for two photoionization pathways. The density matrix formalism has been employed to analyze these signals. Two-color laser-induced fluorescence signal depends on the laser powers used for the first and second-step transitions as well as the first and second-step transition probability whereas two-color, three-photon photoionization signal depends on the third-step transition cross-section at the second-step laser wavelength along with the laser powers and transition probability for the first and second-step transitions. Two-color laser-induced fluorescence was used to measure the second-step transition probability. The second-step transition probability obtained was used to infer the photoionization cross-section. Thus, the methodology combining two-color, three-photon photoionization and two-color fluorescence signals in a single experiment has been established for the first time to measure the second-step transition probability as well as the photoionization cross-section. - Highlights: • Laser-induced photoionization and fluorescence signals have been simultaneously observed. • The density matrix formalism has been employed to analyze these signals. • Two-color laser-induced fluorescence was used to measure the second-step transition probability. • The second-step transition probability obtained was used to infer the photoionization cross-section. • Transition probability and photoionization cross-section have been measured in a single experiment

  20. K-edge x-ray fluorescence analysis for actinide and heavy elements solution concentration measurements

    Camp, D.C.

    1984-07-01

    Advantages of using Co-57 as an exciter for K XRFA include: a compact design that requires no x-ray tubes; the exciter-detector assembly locates remote from support electronics; on-line, at-line, or off-line configurations for monitor/measurements; systems that can be run by semi-skilled technicians, once programmed; and operated via remote terminals with results sent to control rooms; heavy element concentrations that are measurable thru industrial pipes; independent of minor changes in solution matrix or source half life with concentration results reported in near-real-time; a dynamic range of measurable concentrations that is greater than 10 4 ; measurement times that are reasonable even at 1 gram/liter; and for nuclear safeguards, it provides the <0.5% accuracy required by DOE for the accountability of U, Pu, or both, once the system is calibrated

  1. Direct measurement of the concentration of metastable ions produced from neutral gas particles using laser-induced fluorescence

    Chu, Feng; Skiff, Fred; Berumen, Jorge; Mattingly, Sean; Hood, Ryan

    2017-10-01

    Extensive information can be obtained on wave-particle interactions and wave fields by direct measurement of perturbed ion distribution functions using laser-induced fluorescence (LIF). For practical purposes, LIF is frequently performed on metastables that are produced from neutral gas particles and existing ions in other electronic states. We numerically simulate the ion velocity distribution measurement and wave-detection process using a Lagrangian model for the LIF signal. The results show that under circumstances where the metastable ion population is coming directly from the ionization of neutrals (as opposed to the excitation of ground-state ions), the velocity distribution will only faithfully represent processes which act on the ion dynamics in a time shorter than the metastable lifetime. Therefore, it is important to know the ratio of metastable population coming from neutrals to that from existing ions to correct the LIF measurements of plasma ion temperature and electrostatic waves. In this paper, we experimentally investigate the ratio of these two populations by externally launching an ion acoustic wave and comparing the wave amplitudes that are measured with LIF and a Langmuir probe using a lock-in amplifier. DE-FG02-99ER54543.

  2. Depolarizing Effects of Daikenchuto on Interstitial Cells of Cajal from Mouse Small Intestine.

    Kim, Hyungwoo; Kim, Hyun Jung; Yang, Dongki; Jung, Myeong Ho; Kim, Byung Joo

    2017-01-01

    Daikenchuto (DKT; TJ-100, TU-100), a traditional herbal medicineis used in modern medicine to treat gastrointestinal (GI) functional disorders. Interstitial cells of Cajal (ICCs) are the pacemaker cells of the GI tract and play important roles in the regulation of GI motility. The objective of this study was to investigate the effects of DKT on the pacemaker potentials (PPs) of cultured ICCs from murine small intestine. Enzymatic digestions were used to dissociate ICCs from mouse small intestine tissues. All experiments on ICCs were performed after 12 h of culture. The whole-cell patch-clamp configuration was used to record ICC PPs (current clamp mode). All experiments were performed at 30-32°C. In current-clamp modeDKT depolarized and concentration-dependently decreased the amplitudes of PPs. Y25130 (a 5-HT 3 receptor antagonist) or SB269970 (a 5-HT 7 receptor antagonist) did not block DKT-induced PP depolarization, but RS39604 (a 5-HT 4 receptor antagonist) did. Methoctramine (a muscarinic M 2 receptor antagonist) failed to block DKT-induced PP depolarization, but pretreating 4-diphenylacetoxy-N-methylpiperidine methiodide (a muscarinic M 3 receptor antagonist) facilitated blockade of DKT-induced PP depolarization. Pretreatment with an external Ca 2+ -free solution or thapsigargin abolished PPsand under these conditions, DKT did not induce PP depolarization. Furthermore Ginseng radix and Zingiberis rhizomes depolarized PPs, whereas Zanthoxyli fructus fruit (the third component of DKT) hyperpolarized PPs. These results suggest that DKT depolarizes ICC PPs in an internal or external Ca 2+ -dependent manner by stimulating 5-HT 4 and M 3 receptors. Furthermore, the authors suspect that the component in DKT largely responsible for depolarization is probably also a component of Ginseng radix and Zingiberis rhizomes. Daikenchuto (DKT) depolarized and concentration-dependently decreased the amplitudes of pacemaker potentials (PPs)Y25130 (a 5-HT 3 receptor antagonist) or

  3. Evaluation of spectral correction techniques for fluorescence measurements on pigmented lesions in vivo

    Sterenborg, H. J.; Saarnak, A. E.; Frank, R.; Motamedi, M.

    1996-01-01

    Recently, the use of optical spectroscopy for non-invasive diagnosis of malignant melanoma has been suggested. The reliability of such optical measurements can be seriously compromised by spatial variations in the optical properties of the tissue that are not related to malignancy. In the present

  4. DERMAL AND MOUTHING TRANSFERS OF SURFACE RESIDUES MEASURED USING FLUORESCENCE IMAGING

    To reduce the uncertainty associated with current estimates of children's exposure to pesticides by dermal contact and non-dietary ingestion, residue transfer data are required. Prior to conducting exhaustive studies, a screening study to develop and test methods for measuring...

  5. In vivo mitochondrial oxygen tension measured by a delayed fluorescence lifetime technique

    Mik, Egbert G.; Johannes, Tanja; Zuurbier, Coert J.; Heinen, Andre; Houben-Weerts, Judith H. P. M.; Balestra, Gianmarco M.; Stap, Jan; Beek, Johan F.; Ince, Can

    2008-01-01

    Mitochondrial oxygen tension (mitoPO(2)) is a key parameter for cellular function, which is considered to be affected under various pathophysiological circumstances. Although many techniques for assessing in vivo oxygenation are available, no technique for measuring mitoPO(2) in vivo exists. Here we

  6. Measurement of trace elements in KH2PO4 crystals by x-ray fluorescence spectrometry

    Ryon, R.W.; Duewer, T.I.

    1981-02-01

    A non-destructive method is described for the quantitative measurement of impurities in KDP (KH 2 PO 4 ) crystals. Part per million concentrations of impurities can be determined with good accuracy in about one hour of instrument time. An energy dispersive x-ray spectrometer is used. Both the crystals and the solutions from which they are grown may be analyzed

  7. Transfer Function and Fluorescence Measurements on New CMOS Pixel Sensor for ATLAS

    Kaemingk, Michael

    2017-01-01

    A new generation of pixel sensors is being designed for the phase II upgrade of the ATLAS Inner Tracker (ITk). These pixel sensors are being tested to ensure that they meet the demands of the ATLAS detector. As a summer student, I was involved in some of the measurements taken for this purpose.

  8. Evaluation on the stability of Hg in ABS disk CRM during measurements by wavelength dispersive X-ray fluorescence spectrometry.

    Ohata, Masaki; Kidokoro, Toshihiro; Hioki, Akiharu

    2012-01-01

    The stability of Hg in an acrylonitrile-butadiene-styrene disk certified reference material (ABS disk CRM, NMIJ CRM 8116-a) during measurements by wavelength dispersion X-ray fluorescence (WD-XRF) analysis was evaluated in this study. The XRF intensities of Hg (L(α)) and Pb (L(α)) as well as the XRF intensity ratios of Hg (L(α))/Pb (L(α)) observed under different X-ray tube current conditions as well as their irradiation time were examined to evaluate the stability of Hg in the ABS disk CRM. The observed XRF intensities and the XRF intensity ratios for up to 32 h of measurements under 80 mA of X-ray tube current condition were constant, even though the surface of the ABS disk CRM was charred by the X-ray irradiation with high current for a long time. Moreover, the measurements on Hg and Pb in the charred disks by an energy dispersive XRF (ED-XRF) spectrometer showed constant XRF intensity ratios of Hg (L(α))/Pb (L(α)). From these results, Hg in the ABS disk CRM was evaluated to be sufficiently stable for XRF analysis.

  9. Measurement of the internal pH of mast cell granules using microvolumetric fluorescence and isotopic techniques

    De Young, M.B.; Nemeth, E.F.; Scarpa, A.

    1987-01-01

    The intragranular pH of isolated mast cell granules was measured. Because of the minute amounts of isolated granules available, two techniques were developed by modifying aminoacridine fluorescence and [ 14 C]methylamine accumulation techniques to permit measurements with microliter sample volumes. Granule purity was demonstrated by electron microscopy, ruthenium red exclusion, and biochemical (histamine, mast cell granule protease) analysis. The internal pH was determined to be 5.55 +/- 0.06, indicating that the pH environment within mast cell granules is not significantly different from that of previously studied granule types (i.e., chromaffin, platelet, pancreatic islet, and pituitary granules). Collapse of the pH gradient by NH+4 was demonstrated with both techniques. No evidence of Cl-/OH- or specific cation/H+ transport was found, and major chloride permeability could not be unequivocably demonstrated. Ca 2+ and Cl- at concentrations normally present extracellularly destabilized granules in the presence of NH+4, but this phenomenon does not necessarily indicate a role for these ions in the exocytotic release of granule contents from intact cells. The pH measurement techniques developed for investigating the properties of granules in mast cells may be useful for studying other granules that can be obtained only in limited quantities

  10. Interactions of glutamine dipeptides with sodium dodecyl sulfate in aqueous solution measured by volume, conductivity, and fluorescence spectra

    Yan Zhenning, E-mail: yanzzn@zzu.edu.cn [Department of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001 (China); Sun Ximeng; Li Weiwei; Li Yu [Department of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001 (China); Wang Jianji [Department of Chemistry, Henan Normal University, Xinxiang, Henan 453007 (China)

    2011-10-15

    Highlights: > Ion-ion and ion-polar group interactions are dominant interactions. > The SDS addition and temperature increase cause a dehydration effect on dipeptides. > The addition of dipeptide in water decreases the c{sub cmc} of SDS. > Enthalpy-entropy compensation takes place during micellization. > Micelle aggregation number was decreased by addition of glutamine dipeptides. - Abstract: Densities, conductivities, and fluorescence spectra of {l_brace}sodium dodecyl sulfate (SDS) + glutamine dipeptide + water{r_brace} mixtures were measured as a function of temperature. The density data have been utilized to calculate apparent molar volumes, standard partial molar volumes (V{sub 2,{phi}}{sup o}), standard partial molar volumes of transfer from water to aqueous SDS solutions ({Delta}{sub t}V{sup o}), the hydration number, partial molar expansibility (E{sub {phi}}{sup o}), and Hepler's constant of glutamine dipeptides. The critical micellar concentration (c{sub cmc}) and the degree of counterion dissociation of SDS micelles obtained from electrical conductivity data have been estimated at various concentrations of glutamine dipeptide. Thermodynamic parameters of micellization of SDS in aqueous dipeptide solutions have been determined from c{sub cmc} values and an enthalpy-entropy compensation effect was observed for the ternary systems. The pyrene fluorescence spectra were used to study the change of micropolarity produced by the interaction of SDS with glutamine dipeptide, and the aggregation behavior of SDS. The results have been interpreted in terms of solute-solvent interactions and structural changes in the mixed solutions.

  11. Optical scanner system for high resolution measurement of lubricant distributions on metal strips based on laser induced fluorescence

    Holz, Philipp; Lutz, Christian; Brandenburg, Albrecht

    2017-06-01

    We present a new optical setup, which uses scanning mirrors in combination with laser induced fluorescence to monitor the spatial distribution of lubricant on metal sheets. Current trends in metal processing industry require forming procedures with increasing deformations. Thus a welldefined amount of lubricant is necessary to prevent the material from rupture, to reduce the wearing of the manufacturing tool as well as to prevent problems in post-deforming procedures. Therefore spatial resolved analysis of the thickness of lubricant layers is required. Current systems capture the lubricant distribution by moving sensor heads over the object along a linear axis. However the spatial resolution of these systems is insufficient at high strip speeds, e.g. at press plants. The presented technology uses fast rotating scanner mirrors to deflect a laser beam on the surface. This 405 nm laser light excites the autofluorescence of the investigated lubricants. A coaxial optic collects the fluorescence signal which is then spectrally filtered and recorded using a photomultiplier. From the acquired signal a two dimensional image is reconstructed in real time. This paper presents the sensor setup as well as its characterization. For the calibration of the system reference targets were prepared using an ink jet printer. The presented technology for the first time allows a spatial resolution in the millimetre range at production speed. The presented test system analyses an area of 300 x 300 mm² at a spatial resolution of 1.1 mm in less than 20 seconds. Despite this high speed of the measurement the limit of detection of the system described in this paper is better than 0.05 g/m² for the certified lubricant BAM K-009.

  12. Measurement of pH micro-heterogeneity in natural cheese matrices by fluorescence lifetime imaging

    Zuzana eBurdikova; Zdenek eSvindrych; Jan ePala; Cian eHickey; Martin G. Wilkinson; Jiri ePanek; Mark A. E. Auty; Ammasi ePeriasamy; Jeremiah J. Sheehan

    2015-01-01

    Cheese, a product of microbial fermentation may be defined as a protein matrix entrapping fat, moisture, minerals and solutes as well as dispersed bacterial colonies. The growth and physiology of bacterial cells in these colonies may be influenced by the microenvironment around the colony, or alternatively the cells within the colony may modify the microenvironment (e.g., pH, redox potential) due to their metabolic activity. While cheese pH may be measured at macro level there remains a signi...

  13. Determination of K shell absorption jump factors and jump ratios of 3d transition metals by measuring K shell fluorescence parameters

    Kaçal, Mustafa Recep; Han, İbrahim; Akman, Ferdi

    2015-01-01

    Energy dispersive X-ray fluorescence technique (EDXRF) has been employed for measuring K-shell absorption jump factors and jump ratios for Ti, Cr, Fe, Co, Ni and Cu elements. The jump factors and jump ratios for these elements were determined by measuring K shell fluorescence parameters such as the Kα X-ray production cross-sections, K shell fluorescence yields, Kβ-to-Kα X-rays intensity ratios, total atomic absorption cross sections and mass attenuation coefficients. The measurements were performed using a Cd-109 radioactive point source and an Si(Li) detector in direct excitation and transmission experimental geometry. The measured values for jump factors and jump ratios were compared with theoretically calculated and the ones available in the literature. - Highlights: • This work regard the K shell absorption jump ratios and jump factors of Ti, Cr, Fe, Co, Ni and Cu. • This paper presents the first measurement of these parameters using the experimental K shell fluorescence parameters. • A good agreement was found between experimental and theoretical values. • The EDXRF technique was suitable, precise and reliable for the measurement of these atomic parameters

  14. The anomalous depolarization anisotropy in the central backscattering area for turbid medium with Mie scatterers

    Wang, Xuezhen; Lai, Jiancheng; Song, Yang; Li, Zhenhua

    2018-05-01

    It is generally recognized that circularly polarized light is preferentially maintained over linearly polarized light in turbid medium with Mie scatterers. However, in this work, the anomalous depolarization anisotropy is reported in the backscattering area near the point of illumination. Both experimental and Monte Carlo simulations show preferential retention of linear polarization states compared to circular polarization states in a specific backscattering area. Further analysis indicates that the anomalous depolarization behavior in the specific area is induced by lateral scattering events, which own low circular polarization memory. In addition, it is also found that the size of the anomalous depolarization area is related to the transport mean free path of the turbid medium.

  15. Effect of ouabain on the gamma-[3H]aminobutyric acid uptake and release in the absence of Ca(+)+ and K(+)-depolarization

    Santos, M.S.; Goncalves, P.P.; Carvalho, A.P.

    1990-01-01

    The effect of ouabain on the uptake of tritiated [ 3 H]GABA and on its release in the absence of Ca(+)+ was studied in brain cortex synaptosomes. Ouabain, in the absence of Ca(+)+ and K(+)-depolarization, induces the release of [ 3 H]GABA with half-maximal effect occurring at a concentration of about 7 X 10(-6) M. Parallel measurements of the effects of ouabain on the [ 3 H]GABA uptake and the Na+,K(+)-adenosine triphosphatase activity show that ouabain inhibits both mechanisms and that the half-maximal effect also occurs at about the same ouabain concentration. Although [ 3 H]GABA release is stimulated by ouabain, it appears that the inhibition of [ 3 H]GABA uptake is due to a direct effect on the uptake mechanism, inasmuch as the initial velocity of the process is inhibited by ouabain. Ouabain requires extracellular Na+ for [ 3 H]GABA release and for membrane depolarization and, in the absence of Na+, ouabain does not cause either [ 3 H]GABA release or membrane depolarization. No significant changes in the Na+ gradients occur under conditions which permit release of [ 3 H]GABA, but the Na+,K(+)-adenosine triphosphatase activity is inhibited, which may be responsible for membrane depolarization, which in turn may cause [ 3 H]GABA release or inhibit its uptake

  16. Beveled fiber-optic probe couples a ball lens for improving depth-resolved fluorescence measurements of layered tissue: Monte Carlo simulations

    Jaillon, Franck; Zheng Wei; Huang Zhiwei

    2008-01-01

    In this study, we evaluate the feasibility of designing a beveled fiber-optic probe coupled with a ball lens for improving depth-resolved fluorescence measurements of epithelial tissue using Monte Carlo (MC) simulations. The results show that by using the probe configuration with a beveled tip collection fiber and a flat tip excitation fiber associated with a ball lens, discrimination of fluorescence signals generated in different tissue depths is achievable. In comparison with a flat-tip collection fiber, the use of a large bevel angled collection fiber enables a better differentiation between the shallow and deep tissue layers by changing the excitation-collection fiber separations. This work suggests that the beveled fiber-optic probe coupled with a ball lens has the potential to facilitate depth-resolved fluorescence measurements of epithelial tissues

  17. Assessing boreal forest photosynthetic dynamics through space-borne measurements of greenness, chlorophyll fluorescence and model GPP

    Walther, Sophia; Guanter, Luis; Voigt, Maximilian; Köhler, Philipp; Jung, Martin; Joiner, Joanna

    2015-04-01

    sophia.walther@gfz-potsdam.de The seasonality of photosynthesis of boreal forests is an essential driver of the terrestrial carbon, water and energy cycles. However, current carbon cycle model results only poorly represent interannual variability and predict very different magnitudes and timings of carbon fluxes between the atmosphere and the land surface (e.g. Jung et al. 2011, Richardson et al. 2012). Reflectance-based satellite measurements, which give an indication of the amount of green biomass on the Earth's surface, have so far been used as input to global carbon cycle simulations, but they have limitations as they are not directly linked to instantaneous photosynthesis. As an alternative, space-borne retrievals of sun-induced chlorophyll fluorescence (SIF) boast the potential to provide a direct indication of the seasonality of boreal forest photosynthetic activity and thus to improve carbon model performances. SIF is a small electromagnetic signal that is re-emitted from the photosystems in the chloroplasts, which results in a direct relationship to photosynthetic efficiency. In this contribution we examine the seasonality of the boreal forests with three different vegetation parameters, namely greenness, SIF and model simulations of gross primary production (gross carbon flux into the plants by photosynthesis, GPP). We use the enhanced vegetation index (EVI) to represent green biomass. EVI is calculated from NBAR MODIS reflectance measurements (0.05deg, 16 days temporal resolution) for the time from January 2007-May 2013. SIF data originate from GOME-2 measurements on board the MetOp-A satellite in a spatial resolution of 0.5deg for the time from 2007-2011 (Joiner et al. (2013), Köhler et al. (2014)). As a third data source, data-driven GPP model results are used for the time from 2006-2012 with 0.5deg spatial resolution. The method to quantify phenology developed by Gonsamo et al. (2013) is applied to infer the main phenological phases (greenup/onset of

  18. Dosimetry study for a new in vivo X-ray fluorescence (XRF) bone lead measurement system

    Nie Huiling; Chettle, David; Luo Liqiang; O'Meara, Joanne

    2007-01-01

    A new 109 Cd γ-ray induced bone lead measurement system has been developed to reduce the minimum detectable limit (MDL) of the system. The system consists of four 16 mm diameter detectors. It requires a stronger source compared to the 'conventional' system. A dosimetry study has been performed to estimate the dose delivered by this system. The study was carried out by using human-equivalent phantoms. Three sets of phantoms were made to estimate the dose delivered to three age groups: 5-year old, 10-year old and adults. Three approaches have been applied to evaluate the dose: calculations, Monte Carlo (MC) simulations, and experiments. Experimental results and analytical calculations were used to validate MC simulation. The experiments were performed by placing Panasonic UD-803AS TLDs at different places in phantoms that representing different organs. Due to the difficulty of obtaining the organ dose and the whole body dose solely by experiments and traditional calculations, the equivalent dose and effective dose were calculated by MC simulations. The result showed that the doses delivered to the organs other than the targeted lower leg are negligibly small. The total effective doses to the three age groups are 8.45/9.37 μSv (female/male), 4.20 μSv, and 0.26 μSv for 5-year old, 10-year old and adult, respectively. An approval to conduct human measurements on this system has been received from the Research Ethics Board based on this research

  19. New approach to the dosimetry of ionizing radiations by fluorescence measurement, according to the single photon counting technique, correlated in time at the nanosecond scale

    Sohier, Till

    2011-01-01

    This research thesis reports the first fundamental study of the dosimetry of charged and gamma radiations by measurement of fluorescence resolved in time at a nanosecond scale, in organic matter. This method allows an in-depth and real-time analysis of the deposited dose, while taking ionisation as well as excitation processes into account. The author describes mechanisms of interaction and deposition of energy on dense matter, reports the detailed study of the ion-matter interaction, and the interaction of secondary electrons produced within traces. He addresses mechanisms of energy relaxation, and more particularly the study or organic scintillators. Then, he presents the adopted experimental approach: experimental observation with a statistic reconstitution of the curve representing the intensity of the emitted fluorescence in time and with a nanosecond resolution by using a scintillating sensor for time correlated single photon counting (TCSPC). The next part reports the development of an experimental multi-modal platform for dosimetry by TCSPC aimed at the measurement of fluorescence decays under pulsed excitation (nanosecond pulsed ion beams) and continuous flow excitation (non pulsed beams and radioactive sources). Experimental results are then presented for fluorescence measurements, and compared with measurements obtained by using an ionization chamber under the same irradiation conditions: dose deposited by hellions and carbon ions within polyvinyl toluene and polyethylene terephthalate, use of scintillating optic fibers under gamma irradiation of Caesium 137 and Cobalt 60. A new experimental approach is finally presented to perform dosimetry measurements while experimentally ignoring luminescence produced by Cerenkov effect [fr

  20. Model and methods to assess hepatic function from indocyanine green fluorescence dynamical measurements of liver tissue.

    Audebert, Chloe; Vignon-Clementel, Irene E

    2018-03-30

    The indocyanine green (ICG) clearance, presented as plasma disappearance rate is, presently, a reliable method to estimate the hepatic "function". However, this technique is not instantaneously available and thus cannot been used intra-operatively (during liver surgery). Near-infrared spectroscopy enables to assess hepatic ICG concentration over time in the liver tissue. This article proposes to extract more information from the liver intensity dynamics by interpreting it through a dedicated pharmacokinetics model. In order to account for the different exchanges between the liver tissues, the proposed model includes three compartments for the liver model (sinusoids, hepatocytes and bile canaliculi). The model output dependency to parameters is studied with sensitivity analysis and solving an inverse problem on synthetic data. The estimation of model parameters is then performed with in-vivo measurements in rabbits (El-Desoky et al. 1999). Parameters for different liver states are estimated, and their link with liver function is investigated. A non-linear (Michaelis-Menten type) excretion rate from the hepatocytes to the bile canaliculi was necessary to reproduce the measurements for different liver conditions. In case of bile duct ligation, the model suggests that this rate is reduced, and that the ICG is stored in the hepatocytes. Moreover, the level of ICG remains high in the blood following the ligation of the bile duct. The percentage of retention of indocyanine green in blood, which is a common test for hepatic function estimation, is also investigated with the model. The impact of bile duct ligation and reduced liver inflow on the percentage of ICG retention in blood is studied. The estimation of the pharmacokinetics model parameters may lead to an evaluation of different liver functions. Copyright © 2018 Elsevier B.V. All rights reserved.

  1. Laser-induced fluorescence measurements of argon and xenon ion velocities near the sheath boundary in 3 ion species plasmas

    Yip, Chi-Shung; Hershkowitz, Noah [Department of Engineering Physics, University of Wisconsin-Madison, Madison, Wisconsin 53706 (United States); Severn, Greg [Department of Physics, University of San Diego, San Diego, California 92110 (United States); Baalrud, Scott D. [Department of Physics and Astronomy, University of Iowa, Iowa City, Iowa 52242 (United States)

    2016-05-15

    The Bohm sheath criterion is studied with laser-induced fluorescence in three ion species plasmas using two tunable diode lasers. Krypton is added to a low pressure unmagnetized DC hot filament discharge in a mixture of argon and xenon gas confined by surface multi-dipole magnetic fields. The argon and xenon ion velocity distribution functions are measured at the sheath-presheath boundary near a negatively biased boundary plate. The potential structures of the plasma sheath and presheath are measured by an emissive probe. Results are compared with previous experiments with Ar–Xe plasmas, where the two ion species were observed to reach the sheath edge at nearly the same speed. This speed was the ion sound speed of the system, which is consistent with the generalized Bohm criterion. In such two ion species plasmas, instability enhanced collisional friction was demonstrated [Hershkowitz et al., Phys. Plasmas 18(5), 057102 (2011).] to exist which accounted for the observed results. When three ion species are present, it is demonstrated under most circumstances the ions do not fall out of the plasma at their individual Bohm velocities. It is also shown that under most circumstances the ions do not fall out of the plasma at the system sound speed. These observations are also consistent with the presence of the instabilities.

  2. A Laser-Induced Fluorescence Instrument for Aircraft Measurements of Sulfur Dioxide in the Upper Troposphere and Lower Stratosphere

    Rollins, Andrew W.; Thornberry, Troy D.; Ciciora, Steven J.; McLaughlin, Richard J.; Watts, Laurel A.; Hanisco, Thomas F.; Baumann, Esther; Giorgetta, Fabrizio R.; Bui, Thaopaul V.; Fahey, David W.

    2016-01-01

    This work describes the development and testing of a new instrument for in situ measurements of sulfur dioxide (SO2) on airborne platforms in the upper troposphere and lower stratosphere (UTLS). The instrument is based on the laser-induced fluorescence technique and uses the fifth harmonic of a tunable fiber-amplified semiconductor diode laser system at 1084.5 nm to excite SO2 at 216.9 nm. Sensitivity and background checks are achieved in flight by additions of SO2 calibration gas and zero air, respectively. Aircraft demonstration was performed during the NASA Volcano Plume Investigation Readiness and Gas-Phase and Aerosol Sulfur (VIRGAS) experiment, which was a series of flights using the NASA WB-57F during October 2015 based at Ellington Field and Harlingen, Texas. During these flights, the instrument successfully measured SO2 in the UTLS at background (non-volcanic) conditions with a precision of 2 ppt at 10 s and an overall uncertainty determined primarily by instrument drifts of +/- (16% + 0.9 ppt).

  3. Quantification of Material Fluorescence and Light Scattering Cross Sections Using Ratiometric Bandwidth-Varied Polarized Resonance Synchronous Spectroscopy.

    Xu, Joanna Xiuzhu; Hu, Juan; Zhang, Dongmao

    2018-05-25

    Presented herein is the ratiometric bandwidth-varied polarized resonance synchronous spectroscopy (BVPRS2) method for quantification of material optical activity spectra. These include the sample light absorption and scattering cross-section spectrum, the scattering depolarization spectrum, and the fluorescence emission cross-section and depolarization spectrum in the wavelength region where the sample both absorbs and emits. This ratiometric BVPRS2 spectroscopic method is a self-contained technique capable of quantitatively decoupling material fluorescence and light scattering signal contribution to its ratiometric BVPRS2 spectra through the linear curve-fitting of the ratiometric BVPRS2 signal as a function of the wavelength bandwidth used in the PRS2 measurements. Example applications of this new spectroscopic method are demonstrated with materials that can be approximated as pure scatterers, simultaneous photon absorbers/emitters, simultaneous photon absorbers/scatterers, and finally simultaneous photon absorbers/scatterers/emitters. Because the only instruments needed for this ratiometric BVPRS2 technique are the conventional UV-vis spectrophotometer and spectrofluorometer, this work should open doors for routine decomposition of material UV-vis extinction spectrum into its absorption and scattering component spectra. The methodology and insights provided in this work should be of broad significance to all chemical research that involves photon/matter interactions.

  4. Clearing the waters: Evaluating the need for site-specific field fluorescence corrections based on turbidity measurements

    Saraceno, John F.; Shanley, James B.; Downing, Bryan D.; Pellerin, Brian A.

    2017-01-01

    In situ fluorescent dissolved organic matter (fDOM) measurements have gained increasing popularity as a proxy for dissolved organic carbon (DOC) concentrations in streams. One challenge to accurate fDOM measurements in many streams is light attenuation due to suspended particles. Downing et al. (2012) evaluated the need for corrections to compensate for particle interference on fDOM measurements using a single sediment standard in a laboratory study. The application of those results to a large river improved unfiltered field fDOM accuracy. We tested the same correction equation in a headwater tropical stream and found that it overcompensated fDOM when turbidity exceeded ∼300 formazin nephelometric units (FNU). Therefore, we developed a site-specific, field-based fDOM correction equation through paired in situ fDOM measurements of filtered and unfiltered streamwater. The site-specific correction increased fDOM accuracy up to a turbidity as high as 700 FNU, the maximum observed in this study. The difference in performance between the laboratory-based correction equation of Downing et al. (2012) and our site-specific, field-based correction equation likely arises from differences in particle size distribution between the sediment standard used in the lab (silt) and that observed in our study (fine to medium sand), particularly during high flows. Therefore, a particle interference correction equation based on a single sediment type may not be ideal when field sediment size is significantly different. Given that field fDOM corrections for particle interference under turbid conditions are a critical component in generating accurate DOC estimates, we describe a way to develop site-specific corrections.

  5. Charge asymmetry of the purple membrane measured by uranyl quenching of dansyl fluorescence. [Halobacterium halobium

    Renthal, R.; Cha, C.H.

    1984-05-01

    Purple membrane was covalently labeled with 5-(dimethylamino) naphthalene-1-sulfonyl hydrazine (dansyl hydrazine) by carbodiimide coupling to the cytoplasmic surface (carboxyl-terminal tail: 0.7 mol/mol bacteriorhodopsin) or by periodate oxidation and dimethylaminoborane reduction at the extracellular surface (glycolipids: 1 mol/mol). In 2 mM acetate buffer, pH 5.6, micromolar concentrations of UO/sub 2//sup 2 +/ were found to quench the dansyl groups on the cytoplasmic surface (maximum = 26%), while little quenching was observed at the extracellular surface (maximum = 4%). Uranyl ion quenched dansyl hydrazine in free solution at much higher concentrations. Uranyl also bound tightly to unmodified purple membrane, (apparent dissociation constant = 0.8 ..mu..M) as measured by a centrifugation assay. The maximum stoichiometry was 10 mol/mol of bacteriorhodopsin, which is close to the amount of phospholipid phosphorus in purple membrane. The results were analyzed on the assumptions that UO/sub 2//sup 2 +/ binds in a 1:1 complex with phospholipid phosphate and that the dansyl distributon and quenching mechanisms are the same at both surfaces. This indicates a 9:1 ratio of phosphate between the cytoplasmic and extracellular surfaces. Thus, the surface change density of the cytoplasmic side of the membrane is more negative than - 0.010 charges/A/sup 2/.

  6. Right precordial-directed electrocardiographical markers identify arrhythmogenic right ventricular cardiomyopathy in the absence of conventional depolarization or repolarization abnormalities.

    Cortez, Daniel; Svensson, Anneli; Carlson, Jonas; Graw, Sharon; Sharma, Nandita; Brun, Francesca; Spezzacatene, Anita; Mestroni, Luisa; Platonov, Pyotr G

    2017-10-13

    Arrhythmogenic right ventricular dysplasia/cardiomyopathy (ARVD/C) carries a risk of sudden death. We aimed to assess whether vectorcardiographic (VCG) parameters directed toward the right heart and a measured angle of the S-wave would help differentiate ARVD/C with otherwise normal electrocardiograms from controls. Task Force 2010 definite ARVD/C criteria were met for all patients. Those who did not fulfill Task Force depolarization or repolarization criteria (-ECG) were compared with age and gender-matched control subjects. Electrocardiogram measures of a 3-dimentional spatial QRS-T angle, a right-precordial-directed orthogonal QRS-T (RPD) angle, a root mean square of the right sided depolarizing forces (RtRMS-QRS), QRS duration (QRSd) and the corrected QT interval (QTc), and a measured angle including the upslope and downslope of the S-wave (S-wave angle) were assessed. Definite ARVD/C was present in 155 patients by 2010 Task Force criteria (41.7 ± 17.6 years, 65.2% male). -ECG ARVD/C patients (66 patients) were compared to 66 control patients (41.7 ± 17.6 years, 65.2% male). All parameters tested except the QRSd and QTc significantly differentiated -ECG ARVD/C from control patients (p right-sided VCG or measured angle markers better than the spatial QRS-T angle, the QRSd or QTc, in the absence of Taskforce ECG criteria.

  7. The influence of PAH concentration and distribution on real-time in situ measurements of petroleum products in soils using laser induced fluorescence

    Douglas, G.S.; Lieberman, S.H.; McGinnis, W.C.; Knowles, D.; Peven, C.

    1995-01-01

    Real-time laser induced fluorescence (LIF) in situ measurements of soil samples provide a reliable and cost-effective screening tool for hydrocarbon site assessments. The site characterization and analysis penetrometer system (SCAPS), is a truck-mounted cone penetrometer probe modified with a sapphire window and connected to a laser by fiber optics. The pulsed nitrogen laser 337-nm excitation source induces fluorescence in polynuclear aromatic hydrocarbons (PAHs), which are present in petroleum products. The fluorescence response of these compounds is measured with a fluorometer. The SCAPS can provide continuous hydrocarbon screening measurements to soil depths greater than 100 feet. Discrete soil samples collected from the SCAPS boreholes were extracted and analyzed for total petroleum hydrocarbons (TPH), by gas chromatography with flame ionization detection (GC/FID), and 16 parent and over 100 alkyl substituted PAH compounds by gas chromatography with mass spectrometry detection (GC/MS). This method provides a basis for evaluating the relationship between TPH and PAH concentrations in the soil samples and laser induced fluorescence measurements from the soil borings

  8. 10 CFR Appendix W to Subpart B of... - Uniform Test Method for Measuring the Energy Consumption of Medium Base Compact Fluorescent Lamps

    2010-01-01

    ... 10 Energy 3 2010-01-01 2010-01-01 false Uniform Test Method for Measuring the Energy Consumption of Medium Base Compact Fluorescent Lamps W Appendix W to Subpart B of Part 430 Energy DEPARTMENT OF... the previous step. Round the final energy consumption value, as applicable, to the nearest decimal...

  9. Preliminary evidence that ketamine inhibits spreading depolarizations in acute human brain injury

    Sakowitz, Oliver W; Kiening, Karl L; Krajewski, Kara L

    2009-01-01

    by the noncompetitive N-methyl-d-aspartate receptor antagonist ketamine. This restored electrocorticographic activity. CONCLUSIONS: These anecdotal electrocorticographic findings suggest that ketamine has an inhibitory effect on spreading depolarizations in humans. This is of potential interest for future...

  10. Depolarization Rayleigh scattering as a means of molecular concentration determination in plasmas

    Meulenbroeks, R.F.G.; Schram, D.C.; Jaegers, L.J.M.; Sanden, van de M.C.M.

    1992-01-01

    The difference in polarization for Rayleigh scattered radiation on spherically and nonspherically symmetric scattering objects has been used to obtain molecular species concentrations in plasmas of simple composition. Using a Rayleigh scattering diagnostic, the depolarized component of the scattered

  11. Weak Depolarizing Resonances in the 3-TeV VLHC Booster

    Anferov, V.A.

    1999-01-01

    The possibility of polarized-proton-beam acceleration in the proposed low-field 3-TeV VLHC booster is considered. We find that the low-field combined function magnets in the booster's long FODO cells cause an inadvertent cancellation of most depolarizing fields due to a mechanism suggested earlier by Chao and Derbenev [Part.Accel.36, 25 (1991)]. The strongest spin-depolarizing resonances in the 3-TeV booster seem to be similar in strength to those in the 250-GeV RHIC. Moreover, the strength of the 3-TeV booster's strongest intrinsic depolarizing resonances decreases with energy, in contrast with the energy growth of the depolarizing resonance's strength in most proton synchrotrons. copyright 1999 The American Physical Society

  12. A review of depolarization modeling for earth-space radio paths at frequencies above 10 GHz

    Bostian, C. W.; Stutzman, W. L.; Gaines, J. M.

    1982-01-01

    A review is presented of models for the depolarization, caused by scattering from raindrops and ice crystals, that limits the performance of dual-polarized satellite communication systems at frequencies above 10 GHz. The physical mechanisms of depolarization as well as theoretical formulations and empirical data are examined. Three theoretical models, the transmission, attenuation-derived, and scaling models, are described and their relative merits are considered.

  13. A Lagrangian model for laser-induced fluorescence and its application to measurements of plasma ion temperature and electrostatic waves

    Chu, F.; Skiff, F.

    2018-01-01

    Extensive information can be obtained on wave-particle interactions and wave fields by a direct measurement of perturbed ion distribution functions using laser-induced fluorescence (LIF). For practical purposes, LIF is frequently performed on metastable states that are produced from neutral gas particles and ions in other electronic states. If the laser intensity is increased to obtain a better LIF signal, then optical pumping can produce systematic effects depending on the collision rates which control metastable population and lifetime. We numerically simulate the ion velocity distribution measurement and wave-detection process using a Lagrangian model for the LIF signal for the case where metastables are produced directly from neutrals. This case requires more strict precautions and is important for discharges with energetic primary electrons and a high density of neutrals. Some of the results also apply to metastables produced from pre-existing ions. The simulations show that optical pumping broadening affects the ion velocity distribution function f0(v) and its first-order perturbation f1(v,t) when the laser intensity is increased above a certain level. The results also suggest that ion temperature measurements are only accurate when the metastable ions can live longer than the ion-ion collision mean free time. For the purposes of wave detection, the wave period has to be significantly shorter than the lifetime of metastable ions for a direct interpretation. It is more generally true that metastable ions may be viewed as test-particles. As long as an appropriate model is available, LIF can be extended to a range of environments.

  14. Fluorescence lifetime measurements to determine the core-shell nanostructure of FITC-doped silica nanoparticles: An optical approach to evaluate nanoparticle photostability

    Santra, Swadeshmukul; Liesenfeld, Bernd; Bertolino, Chiara; Dutta, Debamitra; Cao Zehui; Tan Weihong; Moudgil, Brij M.; Mericle, Robert A.

    2006-01-01

    In this paper, we described a novel fluorescence lifetime-based approach to determine the core-shell nanostructure of FITC-(fluorescein isothiocyanate, isomer I) doped fluorescent silica nanoparticles (FSNPs). Because of phase homogeneity between the core and the shell, electron microscopic technique could not be used to characterize such core-shell nanostructure. Our optical approach not only revealed the core-shell nanostructure of FSNPs but also evaluated photobleaching of FSNPs both in the solvated and non-solvated (dry) states. The FSNPs were produced via Stoeber's method by hydrolysis and co-condensation reaction of tetraethylorthosilicate (TEOS) and fluorescein linked (3-aminopropyl)triethoxysilane (FITC-APTS conjugate) in the presence of ammonium hydroxide catalyst. To obtain a pure silica surface coating, FSNPs were then post-coated with TEOS. The average particle size was 135 nm as determined by TEM (transmission electron microscope) measurements. Fluorescence excitation and emission spectral data demonstrated successful doping of FITC dye molecules in FSNPs. Fluorescence lifetime data revealed that approximately 62% of dye molecules remained in the solvated silica shell, while 38% of dye molecules remained in the non-solvated (dry) silica core. Photobleaching experiments of FSNPs were conducted both in DI water (solution state) and in air (dry state). Severe photobleaching of FSNPs was observed in air. However, FSNPs were moderately photostable in the solution state. Photostability of FSNPs in both solution and dry states was explained on the basis of fluorescence lifetime data

  15. Chlorovirus-mediated membrane depolarization of Chlorella alters secondary active transport of solutes.

    Agarkova, Irina; Dunigan, David; Gurnon, James; Greiner, Timo; Barres, Julia; Thiel, Gerhard; Van Etten, James L

    2008-12-01

    Paramecium bursaria chlorella virus 1 (PBCV-1) is the prototype of a family of large, double-stranded DNA, plaque-forming viruses that infect certain eukaryotic chlorella-like green algae from the genus Chlorovirus. PBCV-1 infection results in rapid host membrane depolarization and potassium ion release. One interesting feature of certain chloroviruses is that they code for functional potassium ion-selective channel proteins (Kcv) that are considered responsible for the host membrane depolarization and, as a consequence, the efflux of potassium ions. This report examines the relationship between cellular depolarization and solute uptake. Annotation of the virus host Chlorella strain NC64A genome revealed 482 putative transporter-encoding genes; 224 are secondary active transporters. Solute uptake experiments using seven radioactive compounds revealed that virus infection alters the transport of all the solutes. However, the degree of inhibition varied depending on the solute. Experiments with nystatin, a drug known to depolarize cell membranes, produced changes in solute uptake that are similar but not identical to those that occurred during virus infection. Therefore, these studies indicate that chlorovirus infection causes a rapid and sustained depolarization of the host plasma membrane and that this depolarization leads to the inhibition of secondary active transporters that changes solute uptake.

  16. X-ray induced fluorescence measurement of segregation in a DyI{sub 3}-Hg metal-halide lamp

    Nimalasuriya, T [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands); Curry, J J [National Institute of Standards and Technology, 100 Bureau Drive, Stop 8422, Gaithersburg, MD 20899-8422 (United States); Sansonetti, C J [National Institute of Standards and Technology, 100 Bureau Drive, Stop 8422, Gaithersburg, MD 20899-8422 (United States); Ridderhof, E J [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands); Shastri, S D [Advanced Photon Source, Argonne National Laboratory, Argonne, IL 60439 (United States); Flikweert, A J [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands); Stoffels, W W [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands); Haverlag, M [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands); Mullen, J J A M van der [Department of Applied Physics, Eindhoven University of Technology, PO Box 513, 5600 MB Eindhoven (Netherlands)

    2007-05-07

    Segregation of elemental Dy in a DyI{sub 3}-Hg metal-halide high-intensity discharge lamp has been observed with x-ray induced fluorescence. Significant radial and axial Dy segregation are seen, with the axial segregation characterized by a Fischer parameter value of {lambda} = 0.215 {+-} 0.002 mm{sup -1}. This is within 7% of the value ({lambda} = 0.20 {+-} 0.01 mm{sup -1}) obtained by Flikweert et al (2005 J. Appl. Phys. 98 073301) based on laser absorption by neutral Dy atoms. Elemental I is seen to exhibit considerably less axial and radial segregation. Some aspects of the observed radial segregation are compatible with a simplified fluid picture describing two main transition regions in the radial coordinate. The first transition occurs in the region where DyI{sub 3} molecules are in equilibrium with neutral Dy atoms. The second transition occurs where neutral Dy atoms are in equilibrium with ionized Dy. These measurements are part of a larger study on segregation in metal-halide lamps under a variety of conditions.

  17. Spatially and Temporally Resolved Atomic Oxygen Measurements in Short Pulse Discharges by Two Photon Laser Induced Fluorescence

    Lempert, Walter; Uddi, Mruthunjaya; Mintusov, Eugene; Jiang, Naibo; Adamovich, Igor

    2007-10-01

    Two Photon Laser Induced Fluorescence (TALIF) is used to measure time-dependent absolute oxygen atom concentrations in O2/He, O2/N2, and CH4/air plasmas produced with a 20 nanosecond duration, 20 kV pulsed discharge at 10 Hz repetition rate. Xenon calibrated spectra show that a single discharge pulse creates initial oxygen dissociation fraction of ˜0.0005 for air like mixtures at 40-60 torr total pressure. Peak O atom concentration is a factor of approximately two lower in fuel lean (φ=0.5) methane/air mixtures. In helium buffer, the initially formed atomic oxygen decays monotonically, with decay time consistent with formation of ozone. In all nitrogen containing mixtures, atomic oxygen concentrations are found to initially increase, for time scales on the order of 10-100 microseconds, due presumably to additional O2 dissociation caused by collisions with electronically excited nitrogen. Further evidence of the role of metastable N2 is demonstrated from time-dependent N2 2^nd Positive and NO Gamma band emission spectroscopy. Comparisons with modeling predictions show qualitative, but not quantitative, agreement with the experimental data.

  18. In vivo energy dispersive X-ray fluorescence for measuring the content of essential and toxic trace elements in teeth

    Zaichick, V.; Ovchjarenko, N.; Zaichick, S.

    1999-01-01

    The calibration and application of a facility, based on energy dispersive X-ray fluorescent analysis (EDXRF) using 109 Cd as an excitation source, for in vivo and in vitro estimation of Ca, Pb, Sr and Zn in tooth enamel is described. During the in vivo measurements, the device ensures tissue protection of face and mouth cavity from radiation, and only a small part of tooth surface under study is irradiated. To calibrate the facility, the contents of Ca, Sr and Zn were analyzed simultaneously in the enamel of 50 teeth by EDXRF and instrumental neutron activation analysis (INAA). Standards prepared from powdered tooth enamel with additions of chemically pure lead compounds were used to calibrate for lead graduation. Enamel calcium is suggested as an internal standard during in vivo EDXRF of teeth. The content of enamel Sr, Zn and Pb was determined by EDXRF in 35 permanent intact teeth of teenagers and adults. It was shown that lead concentration didn't exceed 3 μg/g for all the teeth

  19. Quantitative fluorescence in situ hybridization measurement of telomere length in skin with/without sun exposure or actinic keratosis.

    Ikeda, Hiroyuki; Aida, Junko; Hatamochi, Atsushi; Hamasaki, Yoichiro; Izumiyama-Shimomura, Naotaka; Nakamura, Ken-Ichi; Ishikawa, Naoshi; Poon, Steven S; Fujiwara, Mutsunori; Tomita, Ken-Ichiro; Hiraishi, Naoki; Kuroiwa, Mie; Matsuura, Masaaki; Sanada, Yukihiro; Kawano, Youichi; Arai, Tomio; Takubo, Kaiyo

    2014-03-01

    Chromosomal and genomic instability due to telomere dysfunction is known to play an important role in carcinogenesis. To study telomere shortening in the epidermis surrounding actinic keratosis, we measured telomere lengths of basal, parabasal, and suprabasal cells in epidermis with actinic keratosis (actinic keratosis group, n = 18) and without actinic keratosis (sun-protected, n = 15, and sun-exposed, n = 13 groups) and in actinic keratosis itself as well as in dermal fibroblasts in the 3 groups, using quantitative fluorescence in situ hybridization. Among the 3 cell types, telomeres of basal cells were not always the longest, suggesting that tissue stem cells are not necessarily located among basal cells. Telomeres of basal cells in the sun-exposed group were shorter than those in the sun-protected group. Telomeres in the background of actinic keratosis and in actinic keratosis itself and those of fibroblasts in actinic keratosis were significantly shorter than those in the controls. Our findings demonstrate that sun exposure induces telomere shortening and that actinic keratosis arises from epidermis with shorter telomeres despite the absence of any histologic atypia. © 2014.

  20. Segmented frequency-domain fluorescence lifetime measurements: minimizing the effects of photobleaching within a multi-component system.

    Marwani, Hadi M; Lowry, Mark; Keating, Patrick; Warner, Isiah M; Cook, Robert L

    2007-11-01

    This study introduces a newly developed frequency segmentation and recombination method for frequency-domain fluorescence lifetime measurements to address the effects of changing fractional contributions over time and minimize the effects of photobleaching within multi-component systems. Frequency segmentation and recombination experiments were evaluated using a two component system consisting of fluorescein and rhodamine B. Comparison of experimental data collected in traditional and segmented fashion with simulated data, generated using different changing fractional contributions, demonstrated the validity of the technique. Frequency segmentation and recombination was also applied to a more complex system consisting of pyrene with Suwannee River fulvic acid reference and was shown to improve recovered lifetimes and fractional intensity contributions. It was observed that photobleaching in both systems led to errors in recovered lifetimes which can complicate the interpretation of lifetime results. Results showed clear evidence that the frequency segmentation and recombination method reduced errors resulting from a changing fractional contribution in a multi-component system, and allowed photobleaching issues to be addressed by commercially available instrumentation.

  1. Alzheimer's disease evaluation using label-free, stainless, fluorescence to measure tryptophan metabolism along the kynurenine pathway

    Sordillo, Laura A.; Zhang, Lin; Shi, Lingyan; Sriramoju, Vidyasagar; Sordillo, Peter P.; Alfano, Robert R.

    2018-02-01

    Under stress conditions, pro-inflammatory cytokines, such as tumor necrosis factor-alpha, interleukin-1 beta, interleukin 6 and interferon gamma are released. It is known that these cytokines stimulate indoleamine 2,3-dioxygenase (IDO) and tryptophan 2,3-dioxygenase (TDO), which increase tryptophan metabolism through the kynurenine pathway, and that this can cause increased production of neurotoxic compounds. Brain tissues from Alzheimer's disease patients and agematched controls were investigated using label-free fluorescence spectroscopy. Tryptophan (exc. 280/ em. 340 nm) and its metabolites (N-formyl-L-kynurenine (exc. 325/em. 434 nm), kynurenine (exc. 365/em. 480 nm) and kynurenic acid (exc. 330/em. 390 nm)) have distinct spectral profiles. Preliminary results show a difference in the optical signatures in three important areas of the brain (hippocampus, BA 9, BA 17) between patients with Alzheimer's disease and agedmatched controls (normal), and a marked relative increase in tryptophan in the Alzheimer's patients. Thus determinations of tryptophan to tryptophan metabolite ratios could potentially be used to measure IDO and TDO activity and the degree of inflammation in the brain. This label-free optical technique may be useful in the study of Alzheimer's and other neurodegenerative diseases.

  2. MR image enhancement as a function of tissue gadolinium concentration, measured with polarized X-ray fluorescence analysis

    Wang, S.C.; Morita, Y.; White, D.L.; Kaufman, L.; Brasch, R.C.

    1988-01-01

    MR imaging contrast agents alter intensities nonlinearly relative to their tissue concentrations. To extract Gd concentrations from image intensity data, a 13-tube phantom (Gd-DTPA dilutions, 0-10/sup -2/M) was imaged (2 T, 3 mm, spin echo, 300 = msec repetition time, 15 = msec echo time, 128 X 256, four excitations). Also, 18 rats were studied with Gd-DTPA or albumin-(Gd-DTPA)/sub 19/ (nine each, three doses). Liver and renal cortex were imaged before and 10 minutes after contrast material administration, with immediate killing and harvesting, and enhancement was calculated. These samples were assayed by x-ray fluorescent excitation analysis (150-kVp beam, B/sub 4/C ceramic polarizer, Mo-Cu-Ni filter, Si[Li] detector). Gd levels as low as 0.5 ppm (--3.18 x 10/sup -6/M) could be detected in liquid or solid samples. Enhancement increased with a nonlinear relationship to Gd in the range measured. This assay for Gd permits empiric assessment of the relationship between pulse variables, intensity, and paramagnet concentration, allowing Gd values to be estimated from image intensities

  3. Dibucaine mitigates spreading depolarization in human neocortical slices and prevents acute dendritic injury in the ischemic rodent neocortex.

    W Christopher Risher

    Full Text Available Spreading depolarizations that occur in patients with malignant stroke, subarachnoid/intracranial hemorrhage, and traumatic brain injury are known to facilitate neuronal damage in metabolically compromised brain tissue. The dramatic failure of brain ion homeostasis caused by propagating spreading depolarizations results in neuronal and astroglial swelling. In essence, swelling is the initial response and a sign of the acute neuronal injury that follows if energy deprivation is maintained. Choosing spreading depolarizations as a target for therapeutic intervention, we have used human brain slices and in vivo real-time two-photon laser scanning microscopy in the mouse neocortex to study potentially useful therapeutics against spreading depolarization-induced injury.We have shown that anoxic or terminal depolarization, a spreading depolarization wave ignited in the ischemic core where neurons cannot repolarize, can be evoked in human slices from pediatric brains during simulated ischemia induced by oxygen/glucose deprivation or by exposure to ouabain. Changes in light transmittance (LT tracked terminal depolarization in time and space. Though spreading depolarizations are notoriously difficult to block, terminal depolarization onset was delayed by dibucaine, a local amide anesthetic and sodium channel blocker. Remarkably, the occurrence of ouabain-induced terminal depolarization was delayed at a concentration of 1 µM that preserves synaptic function. Moreover, in vivo two-photon imaging in the penumbra revealed that, though spreading depolarizations did still occur, spreading depolarization-induced dendritic injury was inhibited by dibucaine administered intravenously at 2.5 mg/kg in a mouse stroke model.Dibucaine mitigated the effects of spreading depolarization at a concentration that could be well-tolerated therapeutically. Hence, dibucaine is a promising candidate to protect the brain from ischemic injury with an approach that does not rely on

  4. Comparison of Measurements and FluorMOD Simulations for Solar Induced Chlorophyll Fluorescence and Reflectance of a Corn Crop under Nitrogen Treatments [SIF and Reflectance for Corn

    Middleton, Elizabeth M.; Corp, Lawrence A.; Campbell, Petya K. E.

    2007-01-01

    The FLuorescence Explorer (FLEX) satellite concept is one of six semifinalist mission proposals selected in 2006 for pre-Phase studies by the European Space Agency (ESA). The FLEX concept proposes to measure passive solar induced chlorophyll fluorescence (SIF) of terrestrial ecosystems. A new spectral vegetation Fluorescence Model (FluorMOD) was developed to include the effects of steady state SIF on canopy reflectance. We used our laboratory and field measurements previously acquired from foliage and canopies of corn (Zea mays L.) under controlled nitrogen (N) fertilization to parameterize and evaluate FluorMOD. Our data included biophysical properties, fluorescence (F) and reflectance spectra for leaves; reflectance spectra of canopies and soil; solar irradiance; plot-level leaf area index; and canopy SIF emissions determined using the Fraunhofer Line Depth principal for the atmospheric telluric oxygen absorption features at 688 nm (O2-beta) and 760 nm (O2-alpha). FluorMOD simulations implemented in the default "look-up-table" mode did not reproduce the observed magnitudes of leaf F, canopy SIF, or canopy reflectance. However, simulations for all of these parameters agreed with observations when the default FluorMOD information was replaced with measurements, although N treatment responses were underestimated. Recommendations were provided to enhance FluorMOD's potential utility in support of SIF field experiments and studies of agriculture and ecosystems.

  5. Fluorescence spectroscopy

    Bagatolli, Luis

    2016-01-01

    Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses the foundati......Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses...

  6. Removal method of fluorescent dyes as pretreatment for measurement of major ion concentrations and hydrogen and oxygen isotopic ratios

    Nakata, Kotaro; Hasegawa, Takuma; Kashiwaya, Koki; Kodama, Hiroki; Miyajima, Tohru

    2011-01-01

    The major ion concentration and isotope ratio of hydrogen and oxygen can provide important information for migration of groundwater. Sometimes, quantitative estimation of these chemical and isotopic characteristics of solution is necessary for groundwater containing fluorescent dyes, which are used in drilling borehole and tracer experiments. However, sometimes correct estimation is disturbed by dyes and they become a cause of troubles for measurement equipments. Thus development of method to remove dyes is required so that the characteristics of groundwater can be estimated without the negative effect of dyes on measurement or equipments. In this study, removal of four representative dyes (Uranin, Eosin, Naphthalenesulfonic acid sodium(NAP) and Amino G acid potassium salt (AG)) was investigated. Uranin and Eosin were found to be removed by non-ionic synthetic resin: HP2MG. 99.99% of the dyes were removed from initial solutions containing dyes with 10 mg/L after contact with resin, while the contact had little effect on ion concentrations and oxygen and hydrogen isotope ratios. Thus the chemical and isotopic characteristics of groundwater samples containing Uranin and Eosin can be obtained by using the HP2MG resin. On the other hand, the NAP and AG were found to be difficult to remove by the HP2MG resin but they were able to be removed by anion exchange resin (Dowex 1x8). Though contact of solution with Dowex 1x8 did not affect cation concentrations and hydrogen and oxygen isotope ratios, anion concentrations were changed by the contact. Therefore the Dowex 1x8 is only applicable to estimation of the cation concentrations and isotope ratio of hydrogen and oxygen. When both anion and cation concentrations from the samples were necessary, Uranin or Eosin were recommended as a tracer in drilling or tracer experiments. (author)

  7. Measurement of spatially resolved gas-phase plasma temperatures by optical emission and laser-induced fluorescence spectroscopy

    Davis, G.P.; Gottscho, R.A.

    1983-01-01

    Knowledge of the energy distributions of particles in glow discharges is crucial to the understanding and modeling of plasma reactors used in microelectronic manufacturing. Reaction rates, available product channels, and transport phenomena all depend upon the partitioning of energy in the discharge. Because of the nonequilibrium nature of glow discharges, however, the distribution of energy among different species and among different degrees of freedom cannot be characterized simply by one temperature. The extent to which different temperatures are needed for each degree of freedom and for each species is not known completely. How plasma operating conditions affect these energy distributions is also an unanswered question. We have investigated the temperatures of radicals, ions, and neutrals in CCl 4 , CCl 4 /N 2 (2%), and N 2 discharges. In the CCl 4 systems, we probed the CCl rotational and vibrational energy distributions by laser-induced fluorescence spectroscopy. The rotational distribution always appeared to be thermal but under identical operating conditions was found to be roughly-equal400 K colder than the vibrational distribution. The rotational temperature at any point in the discharge was strongly dependent upon both applied power and surface temperature. Thermal gradients as large as 10 2 K mm -1 were observed near electrode surfaces but the bulk plasmas were isothermal. When 2% N 2 was added to a CCl 4 discharge, N 2 second positive emission was observed and used to estimate the N 2 rotational temperature. The results suggest that emission from molecular actinometers can be used to measure plasma temperatures, providing such measurements are not made in close proximity to surfaces

  8. T-matrix modeling of linear depolarization by morphologically complex soot and soot-containing aerosols

    Mishchenko, Michael I.; Liu, Li; Mackowski, Daniel W.

    2013-07-01

    We use state-of-the-art public-domain Fortran codes based on the T-matrix method to calculate orientation and ensemble averaged scattering matrix elements for a variety of morphologically complex black carbon (BC) and BC-containing aerosol particles, with a special emphasis on the linear depolarization ratio (LDR). We explain theoretically the quasi-Rayleigh LDR peak at side-scattering angles typical of low-density soot fractals and conclude that the measurement of this feature enables one to evaluate the compactness state of BC clusters and trace the evolution of low-density fluffy fractals into densely packed aggregates. We show that small backscattering LDRs measured with ground-based, airborne, and spaceborne lidars for fresh smoke generally agree with the values predicted theoretically for fluffy BC fractals and densely packed near-spheroidal BC aggregates. To reproduce higher lidar LDRs observed for aged smoke, one needs alternative particle models such as shape mixtures of BC spheroids or cylinders.

  9. Dynamic neutron depolarization system for the investigation of time dependent magnetic effects

    Hammer, J.; Badurek, G.; Rauch, H.

    1978-01-01

    To study magnetic after-effects in ferro- and superparamagnetic materials within a range of about 100 μs - 10s a so-called dynamic neutron depolarization system has been developed that is currently installed at the polarized beam facility of the TRIGA Mark II reactor, Vienna. It allows to measure the time dependence of the polarization change of an initially fully polarized neutron beam on its transmission through a sample exposed to a pulsed magnetic field. A split-pair coil mounted directly on the nitrogen shield of a specially designed helium/nitrogen bath cryostat can be energized up to a maximal induction of 0.25T at a slope of about 10 3 Ts -1 . Sample temperatures in the ranges of 4.2-15K and 77-120K can be established. In order to minimize eddy currents the coil suspension as well as the sample holder are sliced radially. The maximal repetition frequency of the field pulses is 100 Hz which is the upper limit of the multiscaler system we use for a synchronized registration of the beam polarization. First measurements are dealing with the superparamagnetic system Cu-1%Co where single domain cobalt precipitations are expected to give rise to relaxation phenomena well observable with this method. (author)

  10. A simple and rapid method for measurement of 10B-para-boronophenylalanine in the blood for boron neutron capture therapy using fluorescence spectrophotometry

    Kashino, Genro; Fukutani, Satoshi; Suzuki, Minoru

    2009-01-01

    10 B deriving from 10 B-para-boronophenylalanine (BPA) and 10 B-borocaptate sodium (BSH) have been detected in blood samples of patients undergoing boron neutron capture therapy (BNCT) using prompt gamma ray spectrometer or Inductively Coupled Plasma (ICP) method, respectively. However, the concentration of each compound cannot be ascertained because boron atoms in both molecules are the target in these assays. Here, we propose a simple and rapid method to measure only BPA by detecting fluorescence based on the characteristics of phenylalanine. 10 B concentrations of blood samples from human or mice were estimated by the fluorescence intensities at 275 nm of a BPA excited by light of wavelength 257 nm using a fluorescence spectrophotometer. The relationship between fluorescence to increased BPA concentration showed a positive linear correlation. Moreover, we established an adequate condition for BPA measurement in blood samples containing BPA, and the estimated 10 B concentrations of blood samples derived from BPA treated mice were similar between the values obtained by our method and those by ICP method. This new assay will be useful to estimate BPA concentration in blood samples obtained from patients undergoing BNCT especially in a combination use of BSH and BPA. (author)

  11. Uphill energy transfer in photosystem I from Chlamydomonas reinhardtii. Time-resolved fluorescence measurements at 77 K.

    Giera, Wojciech; Szewczyk, Sebastian; McConnell, Michael D; Redding, Kevin E; van Grondelle, Rienk; Gibasiewicz, Krzysztof

    2018-04-04

    Energetic properties of chlorophylls in photosynthetic complexes are strongly modulated by their interaction with the protein matrix and by inter-pigment coupling. This spectral tuning is especially striking in photosystem I (PSI) complexes that contain low-energy chlorophylls emitting above 700 nm. Such low-energy chlorophylls have been observed in cyanobacterial PSI, algal and plant PSI-LHCI complexes, and individual light-harvesting complex I (LHCI) proteins. However, there has been no direct evidence of their presence in algal PSI core complexes lacking LHCI. In order to determine the lowest-energy states of chlorophylls and their dynamics in algal PSI antenna systems, we performed time-resolved fluorescence measurements at 77 K for PSI core and PSI-LHCI complexes isolated from the green alga Chlamydomonas reinhardtii. The pool of low-energy chlorophylls observed in PSI cores is generally smaller and less red-shifted than that observed in PSI-LHCI complexes. Excitation energy equilibration between bulk and low-energy chlorophylls in the PSI-LHCI complexes at 77 K leads to population of excited states that are less red-shifted (by ~ 12 nm) than at room temperature. On the other hand, analysis of the detection wavelength dependence of the effective trapping time of bulk excitations in the PSI core at 77 K provided evidence for an energy threshold at ~ 675 nm, above which trapping slows down. Based on these observations, we postulate that excitation energy transfer from bulk to low-energy chlorophylls and from bulk to reaction center chlorophylls are thermally activated uphill processes that likely occur via higher excitonic states of energy accepting chlorophylls.

  12. Spaceborne Sun-Induced Vegetation Fluorescence Time Series from 2007 to 2015 Evaluated with Australian Flux Tower Measurements

    Sanders, Abram F. J.; Verstraeten, Willem W.; Kooreman, Maurits L.; van Leth, Thomas C.; Beringer, Jason; Joiner, Joanna

    2016-01-01

    A global, monthly averaged time series of Sun-induced Fluorescence (SiF), spanning January 2007 to June 2015, was derived from Metop-A Global Ozone Monitoring Experiment 2 (GOME-2) spectral measurements. Far-red SiF was retrieved using the filling-in of deep solar Fraunhofer lines and atmospheric absorption bands based on the general methodology described by Joiner et al, AMT, 2013. A Principal Component (PC) analysis of spectra over non-vegetated areas was performed to describe the effects of atmospheric absorption. Our implementation (SiF KNMI) is an independent algorithm and differs from the latest implementation of Joiner et al, AMT, 2013 (SiF NASA, v26), because we used desert reference areas for determining PCs (as opposed to cloudy ocean and some desert) and a wider fit window that covers water vapour and oxygen absorption bands (as opposed to only Fraunhofer lines). As a consequence, more PCs were needed (35 as opposed to 12). The two time series (SiF KNMI and SiF NASA, v26) correlate well (overall R of 0.78) except for tropical rain forests. Sensitivity experiments suggest the strong impact of the water vapour absorption band on retrieved SiF values. Furthermore, we evaluated the SiF time series with Gross Primary Productivity (GPP) derived from twelve flux towers in Australia. Correlations for individual towers range from 0.37 to 0.84. They are particularly high for managed biome types. In the de-seasonalized Australian SiF time series, the break of the Millennium Drought during local summer of 2010/2011 is clearly observed.

  13. Detecting long-term low-irradiance stress and water stress of trees with laser-induced fluorescence measurements

    Sagawa, M.; Kurata, K.; Takahashi, K.; Mineuchi, K.

    2001-01-01

    The objective of this study was to find simple and objective methods of diagnosing the ailments of trees in indoor spaces, such as atriums. In this study, two simple diagnostics were compared. One was the analysis of the laser-induced fluorescence spectra of leaves and the other was the analysis of the laser-induced chlorophyll-fluorescence induction kinetics (Kautsky effect). In the latter analysis, second time derivatives of the induction-kinetics curves were used. Cinnamomum camphora and Quercus myrsinifolia grown under different light conditions and Cinnamomum camphora under water stress were used in the experiments. The effects of low irradiance were detected in both the induction kinetics and the spectra; however, the effects of water stress were detected in the induction kinetics only. These results indicate the possibility of utilizing laser-induced-fluorescence induction-kinetics for diagnosing the ailments of trees. (author)

  14. Production of Superoxide in Bacteria Is Stress- and Cell State-Dependent: A Gating-Optimized Flow Cytometry Method that Minimizes ROS Measurement Artifacts with Fluorescent Dyes.

    McBee, Megan E; Chionh, Yok H; Sharaf, Mariam L; Ho, Peiying; Cai, Maggie W L; Dedon, Peter C

    2017-01-01

    The role of reactive oxygen species (ROS) in microbial metabolism and stress response has emerged as a major theme in microbiology and infectious disease. Reactive fluorescent dyes have the potential to advance the study of ROS in the complex intracellular environment, especially for high-content and high-throughput analyses. However, current dye-based approaches to measuring intracellular ROS have the potential for significant artifacts. Here, we describe a robust platform for flow cytometric quantification of ROS in bacteria using fluorescent dyes, with ROS measurements in 10s-of-1000s of individual cells under a variety of conditions. False positives and variability among sample types (e.g., bacterial species, stress conditions) are reduced with a flexible four-step gating scheme that accounts for side- and forward-scattered light (morphological changes), background fluorescence, DNA content, and dye uptake to identify cells producing ROS. Using CellROX Green dye with Escherichia coli, Mycobacterium smegmatis , and Mycobacterium bovis BCG as diverse model bacteria, we show that (1) the generation of a quantifiable CellROX Green signal for superoxide, but not hydrogen peroxide-induced hydroxyl radicals, validates this dye as a superoxide detector; (2) the level of dye-detectable superoxide does not correlate with cytotoxicity or antibiotic sensitivity; (3) the non-replicating, antibiotic tolerant state of nutrient-deprived mycobacteria is associated with high levels of superoxide; and (4) antibiotic-induced production of superoxide is idiosyncratic with regard to both the species and the physiological state of the bacteria. We also show that the gating method is applicable to other fluorescent indicator dyes, such as the 5-carboxyfluorescein diacetate acetoxymethyl ester and 5-cyano-2,3-ditolyl tetrazolium chloride for cellular esterase and reductive respiratory activities, respectively. These results demonstrate that properly controlled flow cytometry coupled

  15. Fluorescent biological aerosol particles measured with the Waveband Integrated Bioaerosol Sensor WIBS-4: laboratory tests combined with a one year field study

    E. Toprak

    2013-01-01

    Full Text Available In this paper bioaerosol measurements conducted with the Waveband Integrated Bioaerosol Sensor mark 4 (WIBS-4 are presented. The measurements comprise aerosol chamber characterization experiments and a one-year ambient measurement period at a semi-rural site in South Western Germany. This study aims to investigate the sensitivity of WIBS-4 to biological and non-biological aerosols and detection of biological particles in the ambient aerosol. Several types of biological and non-biological aerosol samples, including fungal spores, bacteria, mineral dust, ammonium sulphate, combustion soot, and fluorescent polystyrene spheres, were analyzed by WIBS-4 in the laboratory. The results confirm the sensitivity of the ultraviolet light-induced fluorescence (UV-LIF method to biological fluorophores and show the good discrimination capabilities of the two excitation wavelengths/detection wavebands method applied in WIBS-4. However, a weak cross-sensitivity to non-biological fluorescent interferers remains and is discussed in this paper.

    All the laboratory studies have been undertaken in order to prepare WIBS-4 for ambient aerosol measurements. According to the one-year ambient aerosol study, number concentration of fluorescent biological aerosol particles (FBAP show strong seasonal and diurnal variability. The highest number concentration of FBAP was measured during the summer term and decreased towards the winter period when colder and drier conditions prevail. Diurnal FBAP concentrations start to increase after sunset and reach maximum values during the late night and early morning hours. On the other hand, the total aerosol number concentration was almost always higher during daytime than during nighttime and a sharp decrease after sunset was observed. There was no correlation observed between the FBAP concentration and the meteorological parameters temperature, precipitation, wind direction and wind speed. However, a clear correlation was

  16. Simulation of spreading depolarization trajectories in cerebral cortex: Correlation of velocity and susceptibility in patients with aneurysmal subarachnoid hemorrhage

    Denny Milakara

    2017-01-01

    Full Text Available In many cerebral grey matter structures including the neocortex, spreading depolarization (SD is the principal mechanism of the near-complete breakdown of the transcellular ion gradients with abrupt water influx into neurons. Accordingly, SDs are abundantly recorded in patients with traumatic brain injury, spontaneous intracerebral hemorrhage, aneurysmal subarachnoid hemorrhage (aSAH and malignant hemispheric stroke using subdural electrode strips. SD is observed as a large slow potential change, spreading in the cortex at velocities between 2 and 9 mm/min. Velocity and SD susceptibility typically correlate positively in various animal models. In patients monitored in neurocritical care, the Co-Operative Studies on Brain Injury Depolarizations (COSBID recommends several variables to quantify SD occurrence and susceptibility, although accurate measures of SD velocity have not been possible. Therefore, we developed an algorithm to estimate SD velocities based on reconstructing SD trajectories of the wave-front's curvature center from magnetic resonance imaging scans and time-of-SD-arrival-differences between subdural electrode pairs. We then correlated variables indicating SD susceptibility with algorithm-estimated SD velocities in twelve aSAH patients. Highly significant correlations supported the algorithm's validity. The trajectory search failed significantly more often for SDs recorded directly over emerging focal brain lesions suggesting in humans similar to animals that the complexity of SD propagation paths increase in tissue undergoing injury.

  17. On Variability in Satellite Terrestrial Chlorophyll Fluorescence Measurements: Relationships with Phenology and Ecosystem-Atmosphere Carbon Exchange, Vegetation Structure, Clouds, and Sun-Satellite Geometry

    Joiner, J.; Yoshida, Y.; Guanter, L.; Zhang, Y.; Vasilkov, A. P.; Schaefer, K. M.; Huemmrich, K. F.; Middleton, E.; Koehler, P.; Jung, M.; Tucker, C. J.; Lyapustin, A.; Wang, Y.; Frankenberg, C.; Berry, J. A.; Koster, R. D.; Reichle, R. H.; Lee, J. E.; Kawa, S. R.; Collatz, G. J.; Walker, G. K.; Van der Tol, C.

    2014-12-01

    Over the past several years, there have been several breakthroughs in our ability to detect the very small fluorescence emitted by chlorophyll in vegetation globally from space. There are now multiple instruments in space capable of measuring this signal at varying temporal and spatial resolutions. We will review the state-of-the-art with respect to these relatively new satellite measurements and ongoing studies that examine the relationships with photosynthesis. Now that we have a data record spanning more than seven years, we can examine variations due to seasonal carbon uptake, interannual variability, land-use changes, and water and temperature stress. In addition, we examine how clouds and satellite viewing geometry impact the signal. We compare and contrast these variations with those from popular vegetation indices, such as the Normalized Difference Vegetation Index (NDVI), related to the potential photosynthesis as well as with measurements from flux tower gas exchange measurements and other model-based estimates of Global Primary Productivity (GPP). Vegetation fluorescence can be simulated in global vegetation models as well as with 1D canopy radiative transport models. We will describe how the satellite fluorescence data are being used to evaluate and potentially improve these models.

  18. Selective plane illumination microscopy (SPIM) with time-domain fluorescence lifetime imaging microscopy (FLIM) for volumetric measurement of cleared mouse brain samples

    Funane, Tsukasa; Hou, Steven S.; Zoltowska, Katarzyna Marta; van Veluw, Susanne J.; Berezovska, Oksana; Kumar, Anand T. N.; Bacskai, Brian J.

    2018-05-01

    We have developed an imaging technique which combines selective plane illumination microscopy with time-domain fluorescence lifetime imaging microscopy (SPIM-FLIM) for three-dimensional volumetric imaging of cleared mouse brains with micro- to mesoscopic resolution. The main features of the microscope include a wavelength-adjustable pulsed laser source (Ti:sapphire) (near-infrared) laser, a BiBO frequency-doubling photonic crystal, a liquid chamber, an electrically focus-tunable lens, a cuvette based sample holder, and an air (dry) objective lens. The performance of the system was evaluated with a lifetime reference dye and micro-bead phantom measurements. Intensity and lifetime maps of three-dimensional human embryonic kidney (HEK) cell culture samples and cleared mouse brain samples expressing green fluorescent protein (GFP) (donor only) and green and red fluorescent protein [positive Förster (fluorescence) resonance energy transfer] were acquired. The results show that the SPIM-FLIM system can be used for sample sizes ranging from single cells to whole mouse organs and can serve as a powerful tool for medical and biological research.

  19. Real-time measurements of airborne biologic particles using fluorescent particle counter to evaluate microbial contamination: results of a comparative study in an operating theater.

    Dai, Chunyang; Zhang, Yan; Ma, Xiaoling; Yin, Meiling; Zheng, Haiyang; Gu, Xuejun; Xie, Shaoqing; Jia, Hengmin; Zhang, Liang; Zhang, Weijun

    2015-01-01

    Airborne bacterial contamination poses a risk for surgical site infection, and routine surveillance of airborne bacteria is important. Traditional methods for detecting airborne bacteria are time consuming and strenuous. Measurement of biologic particle concentrations using a fluorescent particle counter is a novel method for evaluating air quality. The current study was to determine whether the number of biologic particles detected by the fluorescent particle counter can be used to indicate airborne bacterial counts in operating rooms. The study was performed in an operating theater at a university hospital in Hefei, China. The number of airborne biologic particles every minute was quantified using a fluorescent particle counter. Microbiologic air sampling was performed every 30 minutes using an Andersen air sampler (Pusong Electronic Instruments, Changzhou, China). Correlations between the 2 different methods were analyzed by Pearson correlation coefficients. A significant correlation was observed between biologic particle and bacterial counts (Pearson correlation coefficient = 0.76), and the counting results from 2 methods both increased substantially between operations, corresponding with human movements in the operating room. Fluorescent particle counters show potential as important tools for monitoring bacterial contamination in operating theatres. Copyright © 2015 Association for Professionals in Infection Control and Epidemiology, Inc. Published by Elsevier Inc. All rights reserved.

  20. Characterization of ventricular depolarization and repolarization changes in a porcine model of myocardial infarction.

    Romero, Daniel; Ringborn, Michael; Demidova, Marina; Koul, Sasha; Laguna, Pablo; Platonov, Pyotr G; Pueyo, Esther

    2012-12-01

    In this study, several electrocardiogram (ECG)-derived indices corresponding to both ventricular depolarization and repolarization were evaluated during acute myocardial ischemia in an experimental model of myocardial infarction produced by 40 min coronary balloon inflation in 13 pigs. Significant changes were rapidly observed from minute 4 after the start of coronary occlusion, achieving their maximum values between 11 and 22 min for depolarization and between 9 and 12 min for repolarization indices, respectively. Subsequently, these maximum changes started to decrease during the latter part of the occlusion. Depolarization changes associated with the second half of the QRS complex showed a significant but inverse correlation with the myocardium at risk (MaR) estimated by scintigraphic images. The correlation between MaR and changes of the downward slope of the QRS complex, [Formula: see text], evaluated at the two more relevant peaks observed during the occlusion, was r = -0.75, p evolution, respectively. Repolarization changes, analyzed by evaluation of ST segment elevation at the main observed positive peak, also showed negative, however non-significant correlation with MaR: r = -0.34, p = 0.28. Our results suggest that changes evaluated in the latter part of the depolarization, such as those described by [Formula: see text], which are influenced by R-wave amplitude, QRS width and ST level variations simultaneously, correlate better with the amount of ischemia than other indices evaluated in the earlier part of depolarization or during the ST segment.