Growth dynamics of fine roots in a coniferous fern forest site close to Forsmark in the central part of Sweden

Energy Technology Data Exchange (ETDEWEB)

Persson, Hans; Stadenberg, Ingela (SLU, Dept. of Ecology and Environmental Research, Uppsala (Sweden))

2007-12-15

The seasonal growth dynamics of live and dead roots for trees and the field layer species (g/m2, varying diameter fractions) and live/dead ratios were analysed at a fresh/moist coniferous fern forest site close to the nuclear power plant at Forsmark in the central eastern parts of Sweden. The changes in depth distribution of fine roots were observed at depth intervals of the top humus horizon down to 40 cm in the mineral soil profile. The bulk of living fine roots of trees (< 1 mm in diameter) were found in the mineral soil horizon the total profile down to 40 cm of the mineral soil, where 89, 82, 83 and 89% of the total amount in the whole profile were found. The upper 2.5 cm part of the humus layer contained 83, 81, 100 and 100% of all roots of the humus layer on the four different sampling occasions. High amounts of living fine roots were found in the upper 10 cm of the mineral soil horizon viz. 84, 76, 91 and 69% of the total mineral soil layer. Consequently, both the top soil horizons of the humus and the mineral soil layers were heavily penetrated by living fine roots. The highest proportion of living fine roots was found in the top 2.5 cm of the humus layer. Accordingly, the live/dead ratio of fine roots (< 1 mm in diameter) decreased from the top of the humus layer to the lower part of mineral soil horizon from 8.0-0.3, 0.8-0.2, 4.4-0.4 and 3.3-0.7 (g g-1) for the four sampling occasions, respectively. We concluded that the decrease in the live/ dead ratio was related to decreased vitality with depth of the fine roots in the soil profile. The highest live/dead ratio was found in the upper 2.5 cm of the humus layer for both the tree and field-layer species. This distribution pattern was most evident for tree fine roots < 1 mm in diameter. The mean fine-root biomass (live tissue < 1 mm in diameter) of tree species for the total profile varied on the four sampling occasions between 317, 113, 139 and 248 g m-2. The related fine root necromass (dead tissue

Fine Root Growth and Vertical Distribution in Response to Elevated CO2, Warming and Drought in a Mixed Heathland–Grassland

DEFF Research Database (Denmark)

Arndal, Marie Frost; Tolver, Anders; Larsen, Klaus Steenberg

2018-01-01

in single-factor experiments. In a Danish heathland ecosystem, we investigated both individual and combined effects of elevated CO2, warming and drought on fine root length, net production and standing biomass by the use of minirhizotrons, ingrowth cores and soil coring. Warming increased the net root...... production from ingrowth cores, but decreased fine root number and length in minirhizotrons, whereas there were no significant main effects of drought. Across all treatments and soil depths, CO2 stimulated both the total fine root length (+44%) and the number of roots observed (+39%), with highest relative......Belowground plant responses have received much less attention in climate change experiments than aboveground plant responses, thus hampering a holistic understanding of climate change effects on plants and ecosystems. In addition, responses of plant roots to climate change have mostly been studied...

Rooting depth and root depth distribution of Trifolium repens × T. uniflorum interspecific hybrids.

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Nichols, S N; Hofmann, R W; Williams, W M; van Koten, C

2016-05-20

Traits related to root depth distribution were examined in Trifolium repens × T. uniflorum backcross 1 (BC 1 ) hybrids to determine whether root characteristics of white clover could be improved by interspecific hybridization. Two white clover cultivars, two T. uniflorum accessions and two BC 1 populations were grown in 1 -m deep tubes of sand culture. Maximum rooting depth and root mass distribution were measured at four harvests over time, and root distribution data were fitted with a regression model to provide measures of root system shape. Morphological traits were measured at two depths at harvest 3. Root system shape of the hybrids was more similar to T. uniflorum than to white clover. The hybrids and T. uniflorum had a higher rate of decrease in root mass with depth than white clover, which would result in higher proportions of root mass in the upper profile. Percentage total root mass at 100-200 mm depth was higher for T. uniflorum than white clover, and for Crusader BC 1 than 'Crusader'. Roots of the hybrids and T. uniflorum also penetrated deeper than those of white clover. T. uniflorum had thicker roots at 50-100 mm deep than the other entries, and more of its fine root mass at 400-500 mm. The hybrids and white clover had more of their fine root mass higher in the profile. Consequently, T. uniflorum had a higher root length density at 400-500 mm than most entries, and a smaller decrease in root length density with depth. These results demonstrate that rooting characteristics of white clover can be altered by hybridization with T. uniflorum, potentially improving water and nutrient acquisition and drought resistance. Root traits of T. uniflorum are likely to be adaptations to soil moisture and fertility in its natural environment. © The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

The contribution of fine roots to peatland stability under changing environmental conditions

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Malhotra, A.; Brice, D. J.; Childs, J.; Phillips, J.; Hanson, P. J.; Iversen, C. M.

2017-12-01

Fine-root production and traits are closely linked with ecosystem nutrient and water fluxes, and may regulate these fluxes in response to environmental change. Plant strategies can shift to favoring below- over aboveground biomass allocation when nutrients or moisture are limited. Fine-roots traits such as root tissue density (RTD) or specific root length (SRL) can also adapt to the environment, for example, by maximizing the area of soil exploited by decreasing RTD and increasing SRL during dry conditions. Fine-root trait plasticity could contribute to the stability of peatland carbon function in response to environmental change. However, the extent and mechanisms of peatland fine-root plasticity are unknown. We investigated fine-root growth and traits and their link to environmental factors and aboveground dynamics at SPRUCE (Spruce and Peatland Responses Under Changing Environments), a warming and elevated CO2 (eCO2) experiment in an ombrotrophic peatland. In the first growing season of whole ecosystem warming, fine-root production increased with warming and drying. Above- versus belowground allocation strategies varied by plant functional type (PFT). In shrubs, contrary to our expectation, aboveground- to fine-root production allocation ratio increased with dryer conditions, perhaps as a response to a concurrent increase in nutrients. Trait response hypotheses were largely supported, with RTD decreasing and SRL increasing with warming; however, response varied among PFTs. Once eCO2 was turned on in the second growing season, preliminary results suggest interactive effects of warming and eCO2 on total fine-root production: production decreased or increased with warming in ambient or elevated CO2 plots, respectively. Both trait and production responses to warming and eCO2 varied by microtopography and depth. Our results highlight plasticity of fine-root traits and biomass allocation strategies; the extent and mechanism of which varies by PFT. We will summarize

Phenotypic plasticity of fine root growth increases plant productivity in pine seedlings

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Grissom James E

2004-09-01

Full Text Available Abstract Background The plastic response of fine roots to a changing environment is suggested to affect the growth and form of a plant. Here we show that the plasticity of fine root growth may increase plant productivity based on an experiment using young seedlings (14-week old of loblolly pine. We use two contrasting pine ecotypes, "mesic" and "xeric", to investigate the adaptive significance of such a plastic response. Results The partitioning of biomass to fine roots is observed to reduce with increased nutrient availability. For the "mesic" ecotype, increased stem biomass as a consequence of more nutrients may be primarily due to reduced fine-root biomass partitioning. For the "xeric" ecotype, the favorable influence of the plasticity of fine root growth on stem growth results from increased allocation of biomass to foliage and decreased allocation to fine roots. An evolutionary genetic analysis indicates that the plasticity of fine root growth is inducible, whereas the plasticity of foliage is constitutive. Conclusions Results promise to enhance a fundamental understanding of evolutionary changes of tree architecture under domestication and to design sound silvicultural and breeding measures for improving plant productivity.

A global Fine-Root Ecology Database to address below-ground challenges in plant ecology.

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Iversen, Colleen M; McCormack, M Luke; Powell, A Shafer; Blackwood, Christopher B; Freschet, Grégoire T; Kattge, Jens; Roumet, Catherine; Stover, Daniel B; Soudzilovskaia, Nadejda A; Valverde-Barrantes, Oscar J; van Bodegom, Peter M; Violle, Cyrille

2017-07-01

Variation and tradeoffs within and among plant traits are increasingly being harnessed by empiricists and modelers to understand and predict ecosystem processes under changing environmental conditions. While fine roots play an important role in ecosystem functioning, fine-root traits are underrepresented in global trait databases. This has hindered efforts to analyze fine-root trait variation and link it with plant function and environmental conditions at a global scale. This Viewpoint addresses the need for a centralized fine-root trait database, and introduces the Fine-Root Ecology Database (FRED, http://roots.ornl.gov) which so far includes > 70 000 observations encompassing a broad range of root traits and also includes associated environmental data. FRED represents a critical step toward improving our understanding of below-ground plant ecology. For example, FRED facilitates the quantification of variation in fine-root traits across root orders, species, biomes, and environmental gradients while also providing a platform for assessments of covariation among root, leaf, and wood traits, the role of fine roots in ecosystem functioning, and the representation of fine roots in terrestrial biosphere models. Continued input of observations into FRED to fill gaps in trait coverage will improve our understanding of changes in fine-root traits across space and time. © 2017 UT-Battelle LLC. New Phytologist © 2017 New Phytologist Trust.

Fine root dynamics and trace gas fluxes in two lowland tropical forest soils.

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WHENDEE L. SILVER; ANDREW W. THOMPSON; MEGAN E . MCGRODDY; RUTH K. VARNER; JADSON D. DIAS; HUDSON SILVA; CRILL PATRICK M.; MICHAEL KELLER

2005-01-01

Fine root dynamics have the potential to contribute significantly to ecosystem-scale biogeochemical cycling, including the production and emission of greenhouse gases. This is particularly true in tropical forests which are often characterized as having large fine root biomass and rapid rates of root production and decomposition. We examined patterns in fine root...

Applicability of optical scanner method for fine root dynamics

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Kume, Tomonori; Ohashi, Mizue; Makita, Naoki; Khoon Kho, Lip; Katayama, Ayumi; Matsumoto, Kazuho; Ikeno, Hidetoshi

2016-04-01

Fine root dynamics is one of the important components in forest carbon cycling, as ~60 % of tree photosynthetic production can be allocated to root growth and metabolic activities. Various techniques have been developed for monitoring fine root biomass, production, mortality in order to understand carbon pools and fluxes resulting from fine roots dynamics. The minirhizotron method is now a widely used technique, in which a transparent tube is inserted into the soil and researchers count an increase and decrease of roots along the tube using images taken by a minirhizotron camera or minirhizotron video camera inside the tube. This method allows us to observe root behavior directly without destruction, but has several weaknesses; e.g., the difficulty of scaling up the results to stand level because of the small observation windows. Also, most of the image analysis are performed manually, which may yield insufficient quantitative and objective data. Recently, scanner method has been proposed, which can produce much bigger-size images (A4-size) with lower cost than those of the minirhizotron methods. However, laborious and time-consuming image analysis still limits the applicability of this method. In this study, therefore, we aimed to develop a new protocol for scanner image analysis to extract root behavior in soil. We evaluated applicability of this method in two ways; 1) the impact of different observers including root-study professionals, semi- and non-professionals on the detected results of root dynamics such as abundance, growth, and decomposition, and 2) the impact of window size on the results using a random sampling basis exercise. We applied our new protocol to analyze temporal changes of root behavior from sequential scanner images derived from a Bornean tropical forests. The results detected by the six observers showed considerable concordance in temporal changes in the abundance and the growth of fine roots but less in the decomposition. We also examined

[Fine root dynamics and its relationship with soil fertility in tropical rainforests of Chocó].

Science.gov (United States)

Quinto, Harley; Caicedo, Haylin; Thelis Perez, May; Moreno, Flavio

2016-12-01

The fine roots play an important role in the acquisition of water and minerals from the soil, the global carbon balance and mitigation of climate change. The dynamics (productivity and turnover) of fine roots is essential for nutrient cycling and carbon balance of forest ecosystems. The availability of soil water and nutrients has significantly determined the productivity and turnover of fine roots. It has been hypothesized that fine roots dynamics increases with the availability of soil resources in tropical forest ecosystems. To test this hypothesis in tropical rainforests of Chocó (ecosystems with the highest rainfall in the world), five one-ha permanent plots were established in the localities of Opogodó and Pacurita, where the productivity and turnover of fine roots were measured at 0-10 cm and 10-20 cm depth. The measurement of the fine root production was realized by the Ingrowth core method. The fine root turnover was measured like fine roots production divided mean annual biomass. In addition, soil fertility parameters (pH, nutrients, and texture) were measured and their association with productivity and turnover of fine roots was evaluated. It was found that the sites had nutrient-poor soils. The localities also differ in soil; Opogodó has sandy soils and flat topography, and Pacurita has clay soils, rich in aluminum and mountainous topography. In Opogodó fine root production was 6.50 ± 2.62 t/ha.yr (mean ± SD). In Pacurita, fine root production was 3.61 ± 0.88 t/ha.yr. Also in Opogodó, the fine root turnover was higher than in Pacurita (1.17 /y and 0.62 /y, respectively). Fine root turnover and production in the upper soil layers (10 cm upper soil) was considerably higher. Productivity and turnover of fine roots showed positive correlation with pH and contents of organic matter, total N, K, Mg, and sand; whereas correlations were negative with ECEC and contents of Al, silt, and clay. The percentage of sand was the parameter that best explained

Belowground uptake strategies: how fine-root traits determine tree growth

NARCIS (Netherlands)

Weemstra, Monique

2017-01-01

The growth of trees depends on photosynthetic carbon gain by the leaves, which in turn relies on water and nutrient acquisition by the fine roots. Because the availability of carbon, water and nutrients fluctuates, trees can adjust their leaf and fine-root functional traits to maintain their

PATTERNS OF ROOT GROWTH, TURNOVER, AND DISTRIBUTION IN DIFFERENT AGED PONDEROSA PINE STANDS

Science.gov (United States)

The objectives of this study are to examine the spatial distribution of roots in relation to canopy size and tree distribution, and to determine if rates of fine root production and turnover are similar in the different aged stands. During the fall of 1998, 54 clear plexiglass t...

Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?

OpenAIRE

Kubisch, Petra; Hertel, Dietrich; Leuschner, Christoph

2015-01-01

While most temperate broad-leaved tree species form ectomycorrhizal (EM) symbioses, a few species have arbuscular mycorrhizas (AM). It is not known whether EM and AM tree species differ systematically with respect to fine root morphology, fine root system size and root functioning. In a species-rich temperate mixed forest, we studied the fine root morphology and biomass of three EM and three AM tree species from the genera Acer, Carpinus, Fagus, Fraxinus, and Tilia searching for principal dif...

Fine Mapping of QUICK ROOTING 1 and 2, Quantitative Trait Loci Increasing Root Length in Rice.

Science.gov (United States)

Kitomi, Yuka; Nakao, Emari; Kawai, Sawako; Kanno, Noriko; Ando, Tsuyu; Fukuoka, Shuichi; Irie, Kenji; Uga, Yusaku

2018-02-02

The volume that the root system can occupy is associated with the efficiency of water and nutrient uptake from soil. Genetic improvement of root length, which is a limiting factor for root distribution, is necessary for increasing crop production. In this report, we describe identification of two quantitative trait loci (QTLs) for maximal root length, QUICK ROOTING 1 ( QRO1 ) on chromosome 2 and QRO2 on chromosome 6, in cultivated rice ( Oryza sativa L.). We measured the maximal root length in 26 lines carrying chromosome segments from the long-rooted upland rice cultivar Kinandang Patong in the genetic background of the short-rooted lowland cultivar IR64. Five lines had longer roots than IR64. By rough mapping of the target regions in BC 4 F 2 populations, we detected putative QTLs for maximal root length on chromosomes 2, 6, and 8. To fine-map these QTLs, we used BC 4 F 3 recombinant homozygous lines. QRO1 was mapped between markers RM5651 and RM6107, which delimit a 1.7-Mb interval on chromosome 2, and QRO2 was mapped between markers RM20495 and RM3430-1, which delimit an 884-kb interval on chromosome 6. Both QTLs may be promising gene resources for improving root system architecture in rice. Copyright © 2018 Kitomi et al.

Fine Mapping of QUICK ROOTING 1 and 2, Quantitative Trait Loci Increasing Root Length in Rice

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Yuka Kitomi

2018-02-01

Full Text Available The volume that the root system can occupy is associated with the efficiency of water and nutrient uptake from soil. Genetic improvement of root length, which is a limiting factor for root distribution, is necessary for increasing crop production. In this report, we describe identification of two quantitative trait loci (QTLs for maximal root length, QUICK ROOTING 1 (QRO1 on chromosome 2 and QRO2 on chromosome 6, in cultivated rice (Oryza sativa L.. We measured the maximal root length in 26 lines carrying chromosome segments from the long-rooted upland rice cultivar Kinandang Patong in the genetic background of the short-rooted lowland cultivar IR64. Five lines had longer roots than IR64. By rough mapping of the target regions in BC4F2 populations, we detected putative QTLs for maximal root length on chromosomes 2, 6, and 8. To fine-map these QTLs, we used BC4F3 recombinant homozygous lines. QRO1 was mapped between markers RM5651 and RM6107, which delimit a 1.7-Mb interval on chromosome 2, and QRO2 was mapped between markers RM20495 and RM3430-1, which delimit an 884-kb interval on chromosome 6. Both QTLs may be promising gene resources for improving root system architecture in rice.

Effects of fine root length density and root biomass on soil preferential flow in forest ecosystems

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Yinghu Zhang

2015-04-01

Full Text Available Aim of study: The study was conducted to characterize the impacts of plant roots systems (e.g., root length density and root biomass on soil preferential flow in forest ecosystems. Area of study: The study was carried out in Jiufeng National Forest Park, Beijing, China. Material and methods: The flow patterns were measured by field dye tracing experiments. Different species (Sophora japonica Linn,Platycladus orientalis Franco, Quercus dentata Thunbwere quantified in two replicates, and 12 soil depth were applied. Plant roots were sampled in the sieving methods. Root length density and root biomass were measured by WinRHIZO. Dye coverage was implied in the image analysis, and maximum depth of dye infiltration by direct measurement. Main results: Root length density and root biomass decreased with the increasing distance from soil surface, and root length density was 81.6% higher in preferential pathways than in soil matrix, and 66.7% for root biomass with respect to all experimental plots. Plant roots were densely distributed in the upper soil layers. Dye coverage was almost 100% in the upper 5-10 cm, but then decreased rapidly with soil depth. Root length density and root biomass were different from species: Platycladus orientalis Franco > Quercus dentata Thunb > Sophora japonica Linn. Research highlights: The results indicated that fine roots systems had strong effects on soil preferential flow, particularly root channels enhancing nutrition transport across soil profiles in forest dynamics.

Fine root dynamics of mature European beech (Fagus sylvatica L.) as influenced by elevated ozone concentrations

International Nuclear Information System (INIS)

Mainiero, Raphael; Kazda, Marian; Haeberle, Karl-Heinz; Nikolova, Petia Simeonova; Matyssek, Rainer

2009-01-01

Fine root dynamics (diameter < 1 mm) in mature Fagus sylvatica, with the canopies exposed to ambient or twice-ambient ozone concentrations, were investigated throughout 2004. The focus was on the seasonal timing and extent of fine root dynamics (growth, mortality) in relation to the soil environment (water content, temperature). Under ambient ozone concentrations, a significant relationship was found between fine root turnover and soil environmental changes indicating accelerated fine root turnover under favourable soil conditions. In contrast, under elevated ozone, this relationship vanished as the result of an altered temporal pattern of fine root growth. Fine root survival and turnover rate did not differ significantly between the different ozone regimes, although a delay in current-year fine root shedding was found under the elevated ozone concentrations. The data indicate that increasing tropospheric ozone levels can alter the timing of fine root turnover in mature F. sylvatica but do not affect the turnover rate. - Doubling of ozone concentrations in mature European beech affected the seasonal timing of fine root turnover rather than the turnover rate.

Heavy metal accumulation and phytostabilisation potential of tree fine roots in a contaminated soil

International Nuclear Information System (INIS)

Brunner, Ivano; Luster, Joerg; Guenthardt-Goerg, Madeleine S.; Frey, Beat

2008-01-01

Root systems of Norway spruce (Picea abies) and poplar (Populus tremula) were long-term exposed to metal-contaminated soils in open-top chambers to investigate the accumulation of the heavy metals in the fine roots and to assess the plants suitability for phytostabilisation. The heavy metals from the contaminated soil accumulated in the fine roots about 10-20 times more than in the controls. The capacity to bind heavy metals already reached its maximum after the first vegetation period. Fine roots of spruce tend to accumulate more heavy metals than poplar. Copper and Zinc were mainly detected in the cell walls with larger values in the epidermis than in the cortex. The heavy metals accumulated in the fine roots made up 0.03-0.2% of the total amount in the soils. We conclude that tree fine roots adapt well to conditions with heavy metal contamination, but their phytostabilisation capabilities seem to be very low. - Long-term exposed fine roots of trees are well adapted to soils with high heavy metal contents, but their phytostabilisation capabilities are rather low

Elevated CO2 and O3 effects on fine-root survivorship in ponderosa pine mesocosms.

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Phillips, Donald L; Johnson, Mark G; Tingey, David T; Storm, Marjorie J

2009-07-01

Atmospheric carbon dioxide (CO(2)) and ozone (O(3)) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO(2) and O(3) effects on roots, particularly fine-root life span, a critical demographic parameter and determinant of soil C and N pools and cycling rates. We conducted a study in which ponderosa pine (Pinus ponderosa) seedlings were exposed to two levels of CO(2) and O(3) in sun-lit controlled-environment mesocosms for 3 years. Minirhizotrons were used to monitor individual fine roots in three soil horizons every 28 days. Proportional hazards regression was used to analyze effects of CO(2), O(3), diameter, depth, and season of root initiation on fine-root survivorship. More fine roots were produced in the elevated CO(2) treatment than in ambient CO(2). Elevated CO(2), increasing root diameter, and increasing root depth all significantly increased fine-root survivorship and median life span. Life span was slightly, but not significantly, lower in elevated O(3), and increased O(3) did not reduce the effect of elevated CO(2). Median life spans varied from 140 to 448 days depending on the season of root initiation. These results indicate the potential for elevated CO(2) to increase the number of fine roots and their residence time in the soil, which is also affected by root diameter, root depth, and phenology.

A global analysis of fine root production as affected by soil nitrogen and phosphorus.

Science.gov (United States)

Yuan, Z Y; Chen, Han Y H

2012-09-22

Fine root production is the largest component of belowground production and plays substantial roles in the biogeochemical cycles of terrestrial ecosystems. The increasing availability of nitrogen (N) and phosphorus (P) due to human activities is expected to increase aboveground net primary production (ANNP), but the response of fine root production to N and P remains unclear. If roots respond to nutrients as ANNP, fine root production is anticipated to increase with increasing soil N and P. Here, by synthesizing data along the nutrient gradient from 410 natural habitats and from 469 N and/or P addition experiments, we showed that fine root production increased in terrestrial ecosystems with an average increase along the natural N gradient of up to 0.5 per cent with increasing soil N. Fine root production also increased with soil P in natural conditions, particularly at P production increased by a global average of 27, 21 and 40 per cent, respectively. However, its responses differed among ecosystems and soil types. The global average increases in fine root production are lower than those of ANNP, indicating that above- and belowground counterparts are coupled, but production allocation shifts more to aboveground with higher soil nutrients. Our results suggest that the increasing fertilizer use and combined N deposition at present and in the future will stimulate fine root production, together with ANPP, probably providing a significant influence on atmospheric CO(2) emissions.

Fine root dynamics for forests on contrasting soils in the Colombian Amazon

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E. M. Jiménez

2009-12-01

Full Text Available It has been hypothesized that as soil fertility increases, the amount of carbon allocated to below-ground production (fine roots should decrease. To evaluate this hypothesis, we measured the standing crop fine root mass and the production of fine roots (<2 mm by two methods: (1 ingrowth cores and, (2 sequential soil coring, during 2.2 years in two lowland forests growing on different soils types in the Colombian Amazon. Differences of soil resources were defined by the type and physical and chemical properties of soil: a forest on clay loam soil (Endostagnic Plinthosol at the Amacayacu National Natural Park and, the other on white sand (Ortseinc Podzol at the Zafire Biological Station, located in the Forest Reservation of the Calderón River. We found that the standing crop fine root mass and the production was significantly different between soil depths (0–10 and 10–20 cm and also between forests. The loamy sand forest allocated more carbon to fine roots than the clay loam forest with the production in loamy sand forest twice (mean±standard error=2.98±0.36 and 3.33±0.69 Mg C ha⁻¹ yr⁻¹, method 1 and 2, respectively as much as for the more fertile loamy soil forest (1.51±0.14, method 1, and from 1.03±0.31 to 1.36±0.23 Mg C ha⁻¹ yr⁻¹, method 2. Similarly, the average of standing crop fine root mass was higher in the white-sands forest (10.94±0.33 Mg C ha⁻¹ as compared to the forest on the more fertile soil (from 3.04±0.15 to 3.64±0.18 Mg C ha⁻¹. The standing crop fine root mass also showed a temporal pattern related to rainfall, with the production of fine roots decreasing substantially in the dry period of the year 2005. These results suggest that soil resources may play an important role in patterns of carbon allocation to the production of fine roots in these forests as the proportion of carbon allocated to above- and below-ground organs is different

Ground penetrating radar (GPR) detects fine roots of agricultural crops in the field

Science.gov (United States)

Xiuwei Liu; Xuejun Dong; Qingwu Xue; Daniel I. Leskovar; John Jifon; John R. Butnor; Thomas Marek

2018-01-01

Aim Ground penetrating radar (GPR) as a non-invasive technique is widely used in coarse root detection. However, the applicability of the technique to detect fine roots of agricultural crops is unknown. The objective of this study was to assess the feasibility of utilizing GPR to detect fine roots in the field.

Indirect quantification of fine root production in a near tropical wet mountainous region

Science.gov (United States)

Lu, X.; Zhang, J.; Huang, C.

2016-12-01

The main functions of fine root (defined as diameter floristic) and external (environmental) factors into account, including litter production, canopy density (leaf area index), leaf nutrients (N, K, Ca, Mg, P), weather and/or soil physical conditions (air temperature, humidity, precipitation, solar radiation and soil moisture). The study was conducted in near tropical broadleaf (700 m asl) and conifer (1700 m asl) forests in northeastern Taiwan, generally receiving more than 4000 mm of precipitation per year. For each site, 16 50-cm long minirhizotron tubes were installed. Fine root images were acquired every three weeks. Growth and decline, newly presence and absence of fine roots were delineated by image processing algorithms to derive fine-root productivity through time. Aforementioned internal and external attributes were simultaneously collected as well. Some of these variables were highly correlated and were detrended using principal component analysis. We found that these transformed variables (mainly associated with litter production, precipitation and solar radiation) can delineate the spatiotemporal dynamics of root production well (r2 = 0.87, p = 0.443). In conclusion, this study demonstrated the feasibility of utilized aboveground variables to indirectly assess fine root growth, which could be further developed for the regional scale mapping with aid of remote sensing.

Nine years of irrigation cause vegetation and fine root shifts in a water-limited pine forest.

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Claude Herzog

Full Text Available Scots pines (Pinus sylvestris L. in the inner-Alpine dry valleys of Switzerland have suffered from increased mortality during the past decades, which has been caused by longer and more frequent dry periods. In addition, a proceeding replacement of Scots pines by pubescent oaks (Quercus pubescens Willd. has been observed. In 2003, an irrigation experiment was performed to track changes by reducing drought pressure on the natural pine forest. After nine years of irrigation, we observed major adaptations in the vegetation and shifts in Scots pine fine root abundance and structure. Irrigation permitted new plant species to assemble and promote canopy closure with a subsequent loss of herb and moss coverage. Fine root dry weight increased under irrigation and fine roots had a tendency to elongate. Structural composition of fine roots remained unaffected by irrigation, expressing preserved proportions of cellulose, lignin and phenolic substances. A shift to a more negative δ13C signal in the fine root C indicates an increased photosynthetic activity in irrigated pine trees. Using radiocarbon (14C measurement, a reduced mean age of the fine roots in irrigated plots was revealed. The reason for this is either an increase in newly produced fine roots, supported by the increase in fine root biomass, or a reduced lifespan of fine roots which corresponds to an enhanced turnover rate. Overall, the responses belowground to irrigation are less conspicuous than the more rapid adaptations aboveground. Lagged and conservative adaptations of tree roots with decadal lifespans are challenging to detect, hence demanding for long-term surveys. Investigations concerning fine root turnover rate and degradation processes under a changing climate are crucial for a complete understanding of C cycling.

Effects of long-term temperature and nutrient manipulation on Norway spruce fine roots and mycelia production

DEFF Research Database (Denmark)

Leppälammi-Kujansuu, J.; Ostonen, I.; Strömgren, M.

2013-01-01

Aims and methods The effects of changing climate on ectomycorrhizal (EcM) fine roots were studied in northern Sweden by manipulating soil temperature for 14 years and/or by fertilizing for 22 years. Fine root biomass, necromass, EcM root tip biomass, morphology and number as well as mycelia...... production were determined from soil cores and mesh bags. Results and conclusions The fine root biomass and necromass were highest in the fertilized plots, following similar trends in the above-ground biomass, whereas the EcM root tip biomass per basal area decreased by 22 % in the fertilized plots compared...... to the control. Warming increased the fine root biomass, live/dead-ratio and the number of EcM root tips in the mineral soil and tended to increase the production of EcM mycelia. Greater fine root biomass meant more EcM root tips, although the tip frequency was not affected by fertilization or warming...

Fine Root Growth Phenology, Production, and Turnover in a Northern Hardwood Forest Ecosystem

Science.gov (United States)

Dudley J. Raynal

1994-01-01

A large part of the nutrient flux in deciduous forests is through fine root turnover, yet this process is seldom measured. As part of a nutrient cycling study, fine root dynamics were studied for two years at Huntington Forest in the Adirondack Mountain region of New York, USA. Root growth phenology was characterized using field rhizotrons, three methods were used to...

Elevated CO2 or O3 effects on fine-root survivorship in ponderosa pine

Science.gov (United States)

Atmospheric carbon dioxide (CO2) and ozone (O3) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO2 and O3 effects on roots, particularly fine-root life span, a critical demograp...

Dynamics of soil exploration by fine roots down to a depth of 10 m throughout the entire rotation in Eucalyptus grandis plantations

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Jean-Paul eLaclau

2013-07-01

Full Text Available Although highly weathered soils cover considerable areas in tropical regions, little is known about exploration by roots in deep soil layers. Intensively managed Eucalyptus plantations are simple forest ecosystems that can provide an insight into the belowground growth strategy of fast-growing tropical trees. Fast exploration of deep soil layers by eucalypt fine roots may contribute to achieving a gross primary production (GPP that is among the highest in the world for forests. Soil exploration by fine roots down to a depth of 10 m was studied throughout the complete cycle of Eucalyptus plantations. Intersects of fine roots, less than 1 mm in diameter, and medium-sized roots, 1-3 mm in diameter, were counted on trench walls in a chronosequence of 1-, 2-, 3.5- and 6-year-old plantations on a sandy soil, as well as in an adjacent 6-year-old stand growing in a clayey soil. Two soil profiles were studied down to a depth of 10 m in each stand (down to 6 m at ages 1 and 2 years. The root intersects were counted on 224 m2 of trench walls in 15 pits. Monitoring the soil water content showed that, after clear-cutting, almost all the available water stored down to a depth of 7 m was taken up by tree roots within 1.1 year of planting. The soil space was explored intensively by fine roots down to a depth of 3 m from 1 year after planting, with an increase in anisotropy in the upper layers throughout the stand cycle. About 60% of fine root intersects were found at a depth of more than 1 m, irrespective of stand age. The root distribution was isotropic in deep soil layers and kriged maps showed fine root clumping. The results showed that a considerable volume of soil was explored by fine roots in eucalypt plantations on deep tropical soils, which might prevent water and nutrient losses by deep drainage after canopy closure and contribute to maximizing resource uses.

Soil acidification effects on fine root growth of Douglas-fir on sandy soils

NARCIS (Netherlands)

Olsthoorn, A.F.M.

1998-01-01

The ammonium sulphate deposited in forest ecosystems in the Netherlands as a result of air pollution currently exceeds 80 kg N ha ^-1yr ^-1locally. To study the influence of this air pollution on fine root density and its dynamics, fine root

Limited Effects of Variable-Retention Harvesting on Fungal Communities Decomposing Fine Roots in Coastal Temperate Rainforests.

Science.gov (United States)

Philpott, Timothy J; Barker, Jason S; Prescott, Cindy E; Grayston, Sue J

2018-02-01

Fine root litter is the principal source of carbon stored in forest soils and a dominant source of carbon for fungal decomposers. Differences in decomposer capacity between fungal species may be important determinants of fine-root decomposition rates. Variable-retention harvesting (VRH) provides refuge for ectomycorrhizal fungi, but its influence on fine-root decomposers is unknown, as are the effects of functional shifts in these fungal communities on carbon cycling. We compared fungal communities decomposing fine roots (in litter bags) under VRH, clear-cut, and uncut stands at two sites (6 and 13 years postharvest) and two decay stages (43 days and 1 year after burial) in Douglas fir forests in coastal British Columbia, Canada. Fungal species and guilds were identified from decomposed fine roots using high-throughput sequencing. Variable retention had short-term effects on β-diversity; harvest treatment modified the fungal community composition at the 6-year-postharvest site, but not at the 13-year-postharvest site. Ericoid and ectomycorrhizal guilds were not more abundant under VRH, but stand age significantly structured species composition. Guild composition varied by decay stage, with ruderal species later replaced by saprotrophs and ectomycorrhizae. Ectomycorrhizal abundance on decomposing fine roots may partially explain why fine roots typically decompose more slowly than surface litter. Our results indicate that stand age structures fine-root decomposers but that decay stage is more important in structuring the fungal community than shifts caused by harvesting. The rapid postharvest recovery of fungal communities decomposing fine roots suggests resiliency within this community, at least in these young regenerating stands in coastal British Columbia. IMPORTANCE Globally, fine roots are a dominant source of carbon in forest soils, yet the fungi that decompose this material and that drive the sequestration or respiration of this carbon remain largely

ELEVATED CO2 AND O3 EFFECTS ON FINE-ROOT SURVIVORSHIP IN PONDEROSA PINE MESOCOSMS

Science.gov (United States)

Atmospheric carbon dioxide (CO2) and ozone (O3) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO2 and O3 effects on roots, particularly fine-root life span, a critical demograph...

Does species richness affect fine root biomass and production in young forest plantations?

Science.gov (United States)

Domisch, Timo; Finér, Leena; Dawud, Seid Muhie; Vesterdal, Lars; Raulund-Rasmussen, Karsten

2015-02-01

Tree species diversity has been reported to increase forest ecosystem above-ground biomass and productivity, but little is known about below-ground biomass and production in diverse mixed forests compared to single-species forests. For testing whether species richness increases below-ground biomass and production and thus complementarity between forest tree species in young stands, we determined fine root biomass and production of trees and ground vegetation in two experimental plantations representing gradients in tree species richness. Additionally, we measured tree fine root length and determined species composition from fine root biomass samples with the near-infrared reflectance spectroscopy method. We did not observe higher biomass or production in mixed stands compared to monocultures. Neither did we observe any differences in tree root length or fine root turnover. One reason for this could be that these stands were still young, and canopy closure had not always taken place, i.e. a situation where above- or below-ground competition did not yet exist. Another reason could be that the rooting traits of the tree species did not differ sufficiently to support niche differentiation. Our results suggested that functional group identity (i.e. conifers vs. broadleaved species) can be more important for below-ground biomass and production than the species richness itself, as conifers seemed to be more competitive in colonising the soil volume, compared to broadleaved species.

Fine roots in stands of Fagus sylvatica and Picea abies along a gradient of soil acidification

International Nuclear Information System (INIS)

Braun, Sabine; Cantaluppi, Leonardo; Flueckiger, Walter

2005-01-01

Root length of naturally grown young beech trees (Fagus sylvatica L.) was investigated in 26 forest plots of differing base saturation and nitrogen deposition. The relative length of finest roots (<0.25 mm) was found to decrease in soils with low base saturation. A similar reduction of finest roots in plots with high nitrogen deposition was masked by the effect of base saturation. The formation of adventitious roots was enhanced in acidic soils. The analysis of 128 soil profiles for fine roots of all species present in stands of either Fagus sylvatica L., Picea abies [Karst.] L. or both showed a decreased rooting depth in soils with ≤20% base saturation and in hydromorphic soils. For base rich, well drained soils an average rooting depth of 108 cm was found. This decreased by 28 cm on acidic, well drained soils. The results suggest an effect of the current soil acidification in Switzerland and possibly also of nitrogen deposition on the fine root systems of forest trees. - Fine root length of Fagus sylvatica and fine root depth in stands of Fagus sylvatica and/or Picea abies were impaired in soils with low base saturation

The roots of diversity: below ground species richness and rooting distributions in a tropical forest revealed by DNA barcodes and inverse modeling.

Directory of Open Access Journals (Sweden)

F Andrew Jones

Full Text Available Plants interact with each other, nutrients, and microbial communities in soils through extensive root networks. Understanding these below ground interactions has been difficult in natural systems, particularly those with high plant species diversity where morphological identification of fine roots is difficult. We combine DNA-based root identification with a DNA barcode database and above ground stem locations in a floristically diverse lowland tropical wet forest on Barro Colorado Island, Panama, where all trees and lianas >1 cm diameter have been mapped to investigate richness patterns below ground and model rooting distributions.DNA barcode loci, particularly the cpDNA locus trnH-psba, can be used to identify fine and small coarse roots to species. We recovered 33 species of roots from 117 fragments sequenced from 12 soil cores. Despite limited sampling, we recovered a high proportion of the known species in the focal hectare, representing approximately 14% of the measured woody plant richness. This high value is emphasized by the fact that we would need to sample on average 13 m(2 at the seedling layer and 45 m(2 for woody plants >1 cm diameter to obtain the same number of species above ground. Results from inverse models parameterized with the locations and sizes of adults and the species identifications of roots and sampling locations indicates a high potential for distal underground interactions among plants.DNA barcoding techniques coupled with modeling approaches should be broadly applicable to studying root distributions in any mapped vegetation plot. We discuss the implications of our results and outline how second-generation sequencing technology and environmental sampling can be combined to increase our understanding of how root distributions influence the potential for plant interactions in natural ecosystems.

Fine Root Abundance and Dynamics of Stone Pine (Pinus cembra) at the Alpine Treeline Is Not Impaired by Self-shading.

Science.gov (United States)

Kubisch, Petra; Leuschner, Christoph; Coners, Heinz; Gruber, Andreas; Hertel, Dietrich

2017-01-01

Low temperatures are crucial for the formation of the alpine treeline worldwide. Since soil temperature in the shade of tree canopies is lower than in open sites, it was assumed that self-shading may impair the trees' root growth performance. While experiments with tree saplings demonstrate root growth impairment at soil temperatures below 5-7°C, field studies exploring the soil temperature - root growth relationship at the treeline are missing. We recorded soil temperature and fine root abundance and dynamics in shaded and sun-exposed areas under canopies of isolated Pinus cembra trees at the alpine treeline. In contrast to the mentioned assumption, we found more fine root biomass and higher fine root growth in colder than in warmer soil areas. Moreover, colder areas showed higher fine root turnover and thus lower root lifespan than warmer places. We conclude that P. cembra balances enhanced fine root mortality in cold soils with higher fine root activity and by maintaining higher fine root biomass, most likely as a response to shortage in soil resource supply. The results from our study highlight the importance of in situ measurements on mature trees to understand the fine root response and carbon allocation pattern to the thermal growth conditions at the alpine treeline.

Fine root dynamics in moso bamboo and Japanese cedar forest by scanner method in central Taiwan

Science.gov (United States)

Chen, Zhi-Wei; Lin, Po-Hsuan; Kume, Tomonori

2017-04-01

Phyllostachys pubescens is one of the most important economic plant in the world. Phyllostachys pubescens originates from China and it had been introduced to neighbor countries about three hundred ago due to its economic value. But substantial bamboo forests were abandoned due to declines in demand. These unmanaged bamboo forests have been expanding to adjacent original forests in northern Taiwan. This vegetation alternation may not only decrease the local biodiversity but also affect the carbon cycle. Fine roots are responsible for water and nutrients acquisition and forming the most active part of the whole root system. The characteristics of fine roots are non-woody, small diameter and short lifespan. When roots keep producing new roots and replacing old roots, carbon and nutrients was transported into soil. Consequently, fine root production is one of the important component to understand the below-ground carbon cycle. However, there is few studies about fine root production in moso bamboo forests. We still lack effective method to obtain quantitative and objective data in Taiwan. It severely limits us to understand the below-ground carbon dynamics there. Minirhizotrons method has been used to investigate fine root dynamics by inserting transparent tubes into soil and by comparing changes in root length in images taken by micro-camera. But this method has some shortcomings; i.e. Most of image analysis are conducted manually and time-consuming. And it is difficult to estimate the stand level fine root production from small observation view. A new method "scanner method", which collect A4-size image (bigger than minirhizotrons) can overcome some parts of the shortcoming of minirhizotrons. The transparent acrylic box with A4-box view is inserted into soil and the interface between soil and box is scanned by commercial scanner. We can monitor the total projected root area, growth and decomposition separately by series of images. The primary objective of this study

Fine root productivity varies along nitrogen and phosphorus gradients in high-rainfall mangrove forests of Micronesia

Science.gov (United States)

Cormier, Nicole; Twilley, Robert R.; Ewel, Katherine C.; Krauss, Ken W.

2015-01-01

Belowground biomass is thought to account for much of the total biomass in mangrove forests and may be related to soil fertility. The Yela River and the Sapwalap River, Federated States of Micronesia, contain a natural soil resource gradient defined by total phosphorus (P) density ranging from 0.05 to 0.42 mg cm−3 in different hydrogeomorphic settings. We used this fertility gradient to test the hypothesis that edaphic conditions constrain mangrove productivity through differential allocation of biomass to belowground roots. We removed sequential cores and implanted root ingrowth bags to measure in situ biomass and productivity, respectively. Belowground root biomass values ranged among sites from 0.448 ± 0.096 to 2.641 ± 0.534 kg m−2. Root productivity (roots ≤20 mm) did not vary significantly along the gradient (P = 0.3355) or with P fertilization after 6 months (P = 0.2968). Fine root productivity (roots ≤2 mm), however, did vary significantly among sites (P = 0.0363) and ranged from 45.88 ± 21.37 to 118.66 ± 38.05 g m−2 year−1. The distribution of total standing root biomass and fine root productivity followed patterns of N:P ratios as hypothesized, with larger root mass generally associated with lower relative P concentrations. Many of the processes of nutrient acquisition reported from nutrient-limited mangrove forests may also occur in forests of greater biomass and productivity when growing along soil nutrient gradients.

Fine root dynamics in lodgepole pine and white spruce stands along productivity gradients in reclaimed oil sands sites.

Science.gov (United States)

Jamro, Ghulam Murtaza; Chang, Scott X; Naeth, M Anne; Duan, Min; House, Jason

2015-10-01

Open-pit mining activities in the oil sands region of Alberta, Canada, create disturbed lands that, by law, must be reclaimed to a land capability equivalent to that existed before the disturbance. Re-establishment of forest cover will be affected by the production and turnover rate of fine roots. However, the relationship between fine root dynamics and tree growth has not been studied in reclaimed oil sands sites. Fine root properties (root length density, mean surface area, total root biomass, and rates of root production, turnover, and decomposition) were assessed from May to October 2011 and 2012 using sequential coring and ingrowth core methods in lodgepole pine (Pinus contorta Dougl.) and white spruce (Picea glauca (Moench.) Voss) stands. The pine and spruce stands were planted on peat mineral soil mix placed over tailings sand and overburden substrates, respectively, in reclaimed oil sands sites in Alberta. We selected stands that form a productivity gradient (low, medium, and high productivities) of each tree species based on differences in tree height and diameter at breast height (DBH) increments. In lodgepole pine stands, fine root length density and fine root production, and turnover rates were in the order of high > medium > low productivity sites and were positively correlated with tree height and DBH and negatively correlated with soil salinity (P < 0.05). In white spruce stands, fine root surface area was the only parameter that increased along the productivity gradient and was negatively correlated with soil compaction. In conclusion, fine root dynamics along the stand productivity gradients were closely linked to stand productivity and were affected by limiting soil properties related to the specific substrate used for reconstructing the reclaimed soil. Understanding the impact of soil properties on fine root dynamics and overall stand productivity will help improve land reclamation outcomes.

Coupling Fine-Scale Root and Canopy Structure Using Ground-Based Remote Sensing

Directory of Open Access Journals (Sweden)

Brady S. Hardiman

2017-02-01

Full Text Available Ecosystem physical structure, defined by the quantity and spatial distribution of biomass, influences a range of ecosystem functions. Remote sensing tools permit the non-destructive characterization of canopy and root features, potentially providing opportunities to link above- and belowground structure at fine spatial resolution in functionally meaningful ways. To test this possibility, we employed ground-based portable canopy LiDAR (PCL and ground penetrating radar (GPR along co-located transects in forested sites spanning multiple stages of ecosystem development and, consequently, of structural complexity. We examined canopy and root structural data for coherence (i.e., correlation in the frequency of spatial variation at multiple spatial scales ≤10 m within each site using wavelet analysis. Forest sites varied substantially in vertical canopy and root structure, with leaf area index and root mass more becoming even vertically as forests aged. In all sites, above- and belowground structure, characterized as mean maximum canopy height and root mass, exhibited significant coherence at a scale of 3.5–4 m, and results suggest that the scale of coherence may increase with stand age. Our findings demonstrate that canopy and root structure are linked at characteristic spatial scales, which provides the basis to optimize scales of observation. Our study highlights the potential, and limitations, for fusing LiDAR and radar technologies to quantitatively couple above- and belowground ecosystem structure.

The effect of mycorrhizal inoculation on hybrid poplar fine root dynamics in hydrocarbon contaminated soils

Energy Technology Data Exchange (ETDEWEB)

Gunderson, J.; Knight, J.D.; Van Rees, K.C.J. [Saskatchewan Univ., Saskatoon, SK (Canada). Dept. of Soil Science

2006-07-01

The biological remediation of contaminated soils using plants was discussed. Hybrid poplars are good candidates for phytoremediation because they root deeply, cycle large amounts of water and grow quickly. Their fine root system is pivotal in nutrient and water acquisition. Therefore, in order to maximize the phytoremediation potential, it is important to understand the response of the fine root system. In addition to degrading organic chemicals, ectomycorrhizal (ECM) fungi provide the host with greater access to nutrients. This study determined the relationship between residual soil hydrocarbons and soil properties at a field site. The effects of residual contamination on hybrid poplar fine root dynamics was also examined along with the effect of ectomycorrhizal colonization on hybrid poplar fine root dynamics when grown in diesel contaminated soil under controlled conditions. A minirhizotron camera inside a growth chamber captured images of mycorrhizal inoculation on hybrid poplar fine root production. Walker hybrid poplar seedlings were grown for 12 weeks in a control soil and also in a diesel contaminated soil. Seedlings were also grown in control and diesel contaminated, ectomycorrhizal inoculated soils. The inoculum was a mycorrhizal mix containing Pisolithus tinctorius and Rhizopogon spp. The images showed that colonization by ECM fungi increased hybrid poplar fine root production and aboveground biomass in a diesel contaminated soil compared to non-colonized trees in the same soil. Root:shoot ratios were much higher in the diesel contaminated/non-inoculated treatment than in either of the control soil treatments. Results of phytoremediation in diesel contaminated soil were better in the non-colonized treatment than in the colonized treatment. Both treatments removed more contaminants from the soil than the unplanted control. Much higher quantities of hydrocarbons were found sequestered in the roots from the inoculated treatment than from the non

Development of fine and coarse roots of Thuja occidentalis 'Brabant' in non-irrigated and drip irrigated field plots

NARCIS (Netherlands)

Pronk, A.A.; Willigen, de P.; Heuvelink, E.; Challa, H.

2002-01-01

Aboveground dry mass, total root dry mass and root length density of the fine roots of Thuja occidentalis `Brabant' were determined under non- and drip-irrigated field conditions. Two-dimensional diffusion parameters for dynamic root growth were estimated based on dry mass production of the fine

Automatic discrimination of fine roots in minirhizotron images.

Science.gov (United States)

Zeng, Guang; Birchfield, Stanley T; Wells, Christina E

2008-01-01

Minirhizotrons provide detailed information on the production, life history and mortality of fine roots. However, manual processing of minirhizotron images is time-consuming, limiting the number and size of experiments that can reasonably be analysed. Previously, an algorithm was developed to automatically detect and measure individual roots in minirhizotron images. Here, species-specific root classifiers were developed to discriminate detected roots from bright background artifacts. Classifiers were developed from training images of peach (Prunus persica), freeman maple (Acer x freemanii) and sweetbay magnolia (Magnolia virginiana) using the Adaboost algorithm. True- and false-positive rates for classifiers were estimated using receiver operating characteristic curves. Classifiers gave true positive rates of 89-94% and false positive rates of 3-7% when applied to nontraining images of the species for which they were developed. The application of a classifier trained on one species to images from another species resulted in little or no reduction in accuracy. These results suggest that a single root classifier can be used to distinguish roots from background objects across multiple minirhizotron experiments. By incorporating root detection and discrimination algorithms into an open-source minirhizotron image analysis application, many analysis tasks that are currently performed by hand can be automated.

Microscopic and microprobe analysis of fine roots in healthy and declining spruce (Picea abies (L. ) Karst. ) from different sites

Energy Technology Data Exchange (ETDEWEB)

Stienen, H; Bauch, J; Barckhausen, R; Schaub, H

1984-09-01

In order to contribute to the identification of primary causes of the spruce decline - evident in many regions of the Federal Republic of Germany - fine roots of 30 trees from altogether 14 healthy and damage forest locations were investigated microscopically, anatomically, histometrically and by cellular microprobe analysis. In addition, fine roots of young plants grown in hydroponic cultures at different pH levels and Al input were studied. Fine roots of declining trees developed cortex cells with a reduced diameter and at the same time thicker cell walls; in addition accessory compounds were accumulated in this presumably protective tissue. Tannins were deposited in the parenchyma of the vascular cylinder of fine roots from declining trees, and many pit membranes of the primary xylem often did not differentiate fully. The X-ray energy-dispersive analysis of individual cells revealed, in particular, an insufficient uptake of Ca and Mg in the fine roots of declining trees. Compared with healthy trees, the concentration of aluminium increased in the cortex of the fine roots; this, in turn, had an antagonistic effect on the uptake of Ca and Mg. Moreover, the concentration of iron and sulphur increased in the fine roots of declining trees. This evidence of alterations and damages in the fine roots of damaged spruce indicates that, besides the direct detrimental impact on the needles through the atmosphere serious damage is inflicted also indirectly through the soil.

Altered growth and fine root chemistry of Betula papyrifera and Acer saccharum under elevated CO2

International Nuclear Information System (INIS)

Parsons, W. F. J.; Kopper, B. J.; Lindroth, R. L.

2003-01-01

The effects of carbon dioxide enrichment on fine root chemical composition of two tree species common to northern hardwood forests was investigated. Results showed no change in the root/shoot ratios and fine root percentages in either birch or maple samples as a result of enriched carbon dioxide. Tissue nitrogen concentrations decreased in the fine roots, and consequently, carbon/nitrogen ratios increased with elevated carbon dioxide. In birch only, condensed tannins increased with carbon dioxide enrichment; in maple, neither complex tannins nor hydrosable tannins appear to have been influenced by elevated carbon dioxide. It is suspected that the responses of the tree saplings to elevated carbon dioxide may be related to their successional status. 37 refs., 2 tabs

Spatial distribution of Eucalyptus roots in a deep sandy soil in the Congo: relationships with the ability of the stand to take up water and nutrients.

Science.gov (United States)

Laclau, J P; Arnaud, M; Bouillet, J P; Ranger, J

2001-02-01

Spatial statistical analyses were performed to describe root distribution and changes in soil strength in a mature clonal plantation of Eucalyptus spp. in the Congo. The objective was to analyze spatial variability in root distribution. Relationships between root distribution, soil strength and the water and nutrient uptake by the stand were also investigated. We studied three, 2.35-m-wide, vertical soil profiles perpendicular to the planting row and at various distances from a representative tree. The soil profiles were divided into 25-cm2 grid cells and the number of roots in each of three diameter classes counted in each grid cell. Two profiles were 2-m deep and the third profile was 5-m deep. There was both vertical and horizontal anisotropy in the distribution of fine roots in the three profiles, with root density decreasing sharply with depth and increasing with distance from the stump. Roots were present in areas with high soil strength values (> 6,000 kPa). There was a close relationship between soil water content and soil strength in this sandy soil. Soil strength increased during the dry season mainly because of water uptake by fine roots. There were large areas with low root density, even in the topsoil. Below a depth of 3 m, fine roots were spatially concentrated and most of the soil volume was not explored by roots. This suggests the presence of drainage channels, resulting from the severe hydrophobicity of the upper soil.

Simulating root carbon storage with a coupled carbon — Water cycle root model

Science.gov (United States)

Kleidon, A.; Heimann, M.

1996-12-01

Is it possible to estimate carbon allocation to fine roots from the water demands of the vegetation? We assess this question by applying a root model which is based on optimisation principles. The model uses a new formulation of water uptake by fine roots, which is necessary to explicitly take into account the highly dynamic and non-steady process of water uptake. Its carbon dynamics are driven by maximising the water uptake while keeping maintenance costs at a minimum. We apply the model to a site in northern Germany and check averaged vertical fine root biomass distribution against measured data. The model reproduces the observed values fairly well and the approach seems promising. However, more validation is necessary, especially on the predicted dynamics of the root biomass.

Long-Term Effects of Season of Prescribed Burn on the Fine-Root Growth, Root Carbohydrates, and Foliar Dynamics of Mature Longleaf Pine

Science.gov (United States)

Eric A. Kuehler; Mary Anne Sword Sayer; James D. Haywood; C. Dan Andries

2004-01-01

Depending on the season and intensity of fire, as well as the phenology of foliage and new root growth, fire may damage foliage, and subsequently decrease whole-crown carbon fixation and allocation to the root system. In central Louisiana the authors investigated how season of prescribed burning affects fine-root dynamics, root carbohydrate relations, and leaf area...

Adenylate control contributes to thermal acclimation of sugar maple fine-root respiration in experimentally warmed soil.

Science.gov (United States)

Jarvi, Mickey P; Burton, Andrew J

2018-03-01

We investigated the occurrence of and mechanisms responsible for acclimation of fine-root respiration of mature sugar maple (Acer saccharum) after 3+ years of experimental soil warming (+4 to 5 °C) in a factorial combination with soil moisture addition. Potential mechanisms for thermal respiratory acclimation included changes in enzymatic capacity, as indicated by root N concentration; substrate limitation, assessed by examining nonstructural carbohydrates and effects of exogenous sugar additions; and adenylate control, examined as responses of root respiration to a respiratory uncoupling agent. Partial acclimation of fine-root respiration occurred in response to soil warming, causing specific root respiration to increase to a much lesser degree (14% to 26%) than would be expected for a 4 to 5 °C temperature increase (approximately 55%). Acclimation was greatest when ambient soil temperature was warmer or soil moisture availability was low. We found no evidence that enzyme or substrate limitation caused acclimation but did find evidence supporting adenylate control. The uncoupling agent caused a 1.4 times greater stimulation of respiration in roots from warmed soil. Sugar maple fine-root respiration in warmed soil was at least partially constrained by adenylate use, helping constrain respiration to that needed to support work being performed by the roots. © 2017 John Wiley & Sons Ltd.

Production dynamics of fine roots in beech forests: possible mechanism of resource allocation between above- and below-ground production

Science.gov (United States)

Nakahata, R.; Osawa, A.; Naramoto, M.; Mizunaga, H.; Sato, M.

2017-12-01

The masting phenomenon that seed production has large annual variation with spatial synchrony appears generally in beeches. Therefore, net primary production and carbon allocation mechanism in beech forests may differ among several years in relation to annual variation of seed production. On the other hand, fine roots play key roles in carbon dynamics and nutrient and water acquisition of an ecosystem. Evaluation of fine root dynamics is essential to understand long-term dynamics of production in forest ecosystems. Moreover, the influence of mast seeding on resource allocation should be clarified in such beech forests. The aim of this study is to clarify possible relationships between the patterns of above- and below-ground production in relation to the masting events using observation data of litter fall and fine root dynamics. We applied the litter trap method and a minirhizotron method in a cool-temperate natural forest dominated by beech (Fagus crenata Blume). Ten litter traps were set from 2008 to 2016, then annual leaf and seed production were estimated. Four minirhizotron tubes were buried in Aug. 2008 and soil profiles were scanned monthly until Nov. 2016 during the periods of no snow covering. The scanned soil profiles were analyzed for calculating fine root production using the WinRHIZO Tron software. In the present study site, rich production of mast seeding occurred biennially and fine root production showed various seasonal patterns. There was no significant correlation between seed production and annual fine root production in the same year. However, seed production had a positive correlation with fine root production in autumn in the previous year and indicated a negative correlation with that in autumn in the current year. These results indicate that higher fine root production has led to increased nutrient acquisition, which resulted in rich seed production in the next year. It is also suppressed after the masting events due to shortage in

Response of the Fine Root Production, Phenology, and Turnover Rate of Six Shrub Species from a Subtropical Forest to a Soil Moisture Gradient and Shading

Science.gov (United States)

Fu, X.; Dai, X.; Wang, H.

2015-12-01

Knowledge of the fine root dynamics of different life forms in forest ecosystems is critical to understanding how the overall belowground carbon cycling is affected by climate change. However, our current knowledge regarding how endogenous or exogenous factors regulate the root dynamics of understory vegetation is limited. We selected a suite of study sites representing different habitats with gradients of soil moisture and solar radiation (shading or no shading). We assessed the fine root production phenology, the total fine root production, and the turnover among six understory shrub species in a subtropical climate, and examined the responses of the fine root dynamics to gradients in the soil moisture and solar radiation. The shrubs included three evergreen species, Loropetalum chinense, Vaccinium bracteatum, and Adinandra millettii, and three deciduous species, Serissa serissoides, Rubus corchorifolius, and Lespedeza davidii. We observed that variations in the annual fine root production and turnover among species were significant in the deciduous group but not in the evergreen group. Notably, V. bracteatum and S. serissoides presented the greatest responses in terms of root phenology to gradients in the soil moisture and shading: high-moisture habitat led to a decrease and shade led to an increase in fine root production during spring. Species with smaller fine roots of the 1st+2nd-order diameter presented more sensitive responses in terms of fine root phenology to a soil moisture gradient. Species with a higher fine root nitrogen-to -carbon ratio exhibited more sensitive responses in terms of fine root annual production to shading. Soil moisture and shading did not change the annual fine root production as much as the turnover rate. The fine root dynamics of some understory shrubs varied significantly with soil moisture and solar radiation status and may be different from tree species. Our results emphasize the need to study the understory fine root dynamics

Does species richness affect fine root biomass and production in young forest plantations?

DEFF Research Database (Denmark)

Domisch, Timo; Finér, Leena; Dawud, Seid Muhie

2015-01-01

Tree species diversity has been reported to increase forest ecosystem above-ground biomass and productivity, but little is known about below-ground biomass and production in diverse mixed forests compared to single-species forests. For testing whether species richness increases below-ground biomass...... and production and thus complementarity between forest tree species in young stands, we determined fine root biomass and production of trees and ground vegetation in two experimental plantations representing gradients in tree species richness. Additionally, we measured tree fine root length and determined...... be that these stands were still young, and canopy closure had not always taken place, i.e. a situation where above- or below-ground competition did not yet exist. Another reason could be that the rooting traits of the tree species did not differ sufficiently to support niche differentiation. Our results suggested...

Differential effects of fine root morphology on water dynamics in the root-soil interface

Science.gov (United States)

DeCarlo, K. F.; Bilheux, H.; Warren, J.

2017-12-01

Soil water uptake form plants, particularly in the rhizosphere, is a poorly understood question in the plant and soil sciences. Our study analyzed the role of belowground plant morphology on soil structural and water dynamics of 5 different plant species (juniper, grape, maize, poplar, maple), grown in sandy soils. Of these, the poplar system was extended to capture drying dynamics. Neutron radiography was used to characterize in-situ dynamics of the soil-water-plant system. A joint map of root morphology and soil moisture was created for the plant systems using digital image processing, where soil pixels were connected to associated root structures via minimum distance transforms. Results show interspecies emergent behavior - a sigmoidal relationship was observed between root diameter and bulk/rhizosphere soil water content difference. Extending this as a proxy for extent of rhizosphere development with root age, we observed a logistic growth pattern for the rhizosphere: minimal development in the early stages is superceded by rapid onset of rhizosphere formation, which then stabilizes/decays with the likely root suberization. Dynamics analysis of water content differences between the root/rhizosphere, and rhizosphere/bulk soil interface highlight the persistently higher water content in the root at all water content and root size ranges. At the rhizosphere/bulk soil interface, we observe a shift in soil water dynamics by root size: in super fine roots, we observe that water content is primarily lower in the rhizosphere under wetter conditions, which then gradually increases to a relatively higher water content under drier conditions. This shifts to a persistently higher rhizosphere water content relative to bulk soil in both wet/dry conditions with increased root size, suggesting that, by size, the finest root structures may contribute the most to total soil water uptake in plants.

Vertical and horizontal root distribution of mature aspen clones: mechanisms for resource acquisition

Science.gov (United States)

Landhäusser, S. M.; Snedden, J.; Silins, U.; Devito, K. J.

2012-04-01

Spatial root distribution, root morphology, and intra- and inter-clonal connections of mature boreal trembling aspen clones (Populus tremuloides Michx.) were explored to shed light on the functional relationships between vertical and horizontal distribution of roots and the variation in soil water availability along hill slopes. Root systems of mature aspen were hydraulically excavated in large plots (6 m wide and 12 m long) and to a depth of 30 cm. Most aspen roots were located in the upper 20 cm of the soil and fine and coarse root occupancy was highest in the lower slope positions and lowest towards the upper hill slope position likely because of soil moisture availability. Observation of the root system distribution along the hill slope correlated well with the observation of greater leaf area carried by trees growing at the lower portion of the hill slope. Interestingly, trees growing at the bottom of the slope required also less sapwood area to support the same amount of leaf area of trees growing at the top of a slope. These observations appear to be closely related to soil moisture availability and with that greater productivity at the bottom of the slope. However, trees growing on the upper slope tended to have long lateral roots extending downslope, which suggests long distance water transport through these lateral feeder roots. Genetic analysis indicated that both intra- and inter-clonal root connections occur in aspen, which can play a role in the sharing of resources along moisture gradients. Root systems of boreal aspen growing on upper slope positions exhibited a combination of three attributes (1) asymmetric lateral root systems, that are skewed downslope, (2) deeper taproots, and (3) intra and inter-clonal root connections, which can all be considered adaptive strategies to avoid drought stress in upper slope positions.

Norway spruce fine root dynamics and carbon input into soil in relation to environmental factors

OpenAIRE

Leppälammi-Kujansuu, Jaana

2014-01-01

Knowledge of the quantity of belowground litter carbon (C) input is scarce but highly valued in C budget calculations. Specifically, the turnover rate of fine roots is considered to be one of the most important parameters in the estimation of changes in soil C stock. In this thesis Norway spruce (Picea abies L. (Karst.)) fine root lifespan and litter production and their responses to nutrient availability and temperature were examined. Aboveground foliage and understory litter C inputs were a...

Rooting strategies in a subtropical savanna: a landscape-scale three-dimensional assessment.

Science.gov (United States)

Zhou, Yong; Boutton, Thomas W; Wu, X Ben; Wright, Cynthia L; Dion, Anais L

2018-04-01

In resource-limited savannas, the distribution and abundance of fine roots play an important role in acquiring essential resources and structuring vegetation patterns and dynamics. However, little is known regarding the three-dimensional distribution of fine roots in savanna ecosystems at the landscape scale. We quantified spatial patterns of fine root density to a depth of 1.2 m in a subtropical savanna landscape using spatially specific sampling. Kriged maps revealed that fine root density was highest at the centers of woody patches, decreased towards the canopy edges, and reached lowest values within the grassland matrix throughout the entire soil profile. Lacunarity analyses indicated that spatial heterogeneities of fine root density decreased continuously to a depth of 50 cm and then increased in deeper portions of the soil profile across this landscape. This vertical pattern might be related to inherent differences in root distribution between trees/shrubs and herbaceous species, and the presence/absence of an argillic horizon across this landscape. The greater density of fine roots beneath woody patches in both upper and lower portions of the soil profile suggests an ability to acquire disproportionately more resources than herbaceous species, which may facilitate the development and persistence of woody patches across this landscape.

Fine-tuning by strigolactones of root response to low phosphate.

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Kapulnik, Yoram; Koltai, Hinanit

2016-03-01

Strigolactones are plant hormones that regulate the development of different plant parts. In the shoot, they regulate axillary bud outgrowth and in the root, root architecture and root-hair length and density. Strigolactones are also involved with communication in the rhizosphere, including enhancement of hyphal branching of arbuscular mycorrhizal fungi. Here we present the role and activity of strigolactones under conditions of phosphate deprivation. Under these conditions, their levels of biosynthesis and exudation increase, leading to changes in shoot and root development. At least for the latter, these changes are likely to be associated with alterations in auxin transport and sensitivity. On the other hand, strigolactones may positively affect plant-mycorrhiza interactions and thereby promote phosphate acquisition by the plant. Strigolactones may be a way for plants to fine-tune their growth pattern under phosphate deprivation. © 2015 Institute of Botany, Chinese Academy of Sciences.

Fine root biomass, necromass and chemistry during seven years of elevated aluminium concentrations in the soil solution of a middle-aged Picea abies stand.

Science.gov (United States)

Eldhuset, Toril D; Lange, Holger; de Wit, Helene A

2006-10-01

Toxic effects of aluminium (Al) on Picea abies (L.) Karst. (Norway spruce) trees are well documented in laboratory-scale experiments, but field-based evidence is scarce. This paper presents results on fine root growth and chemistry from a field manipulation experiment in a P. abies stand that was 45 years old when the experiment started in 1996. Different amounts of dissolved aluminium were added as AlCl3 by means of periodic irrigation during the growing season in the period 1997-2002. Potentially toxic concentrations of Al in the soil solution were obtained. Fine roots were studied from direct cores (1996) and sequential root ingrowth cores (1999, 2001, 2002) in the mineral soil (0-40 cm). We tested two hypotheses: (1) elevated concentration of Al in the root zone leads to significant changes in root biomass, partitioning into fine, coarse, living or dead fractions, and distribution with depth; (2) elevated Al concentration leads to a noticeable uptake of Al and reduced uptake of Ca and Mg; this results in Ca and Mg depletion in roots. Hypothesis 1 was only marginally supported, as just a few significant treatment effects on biomass were found. Hypothesis 2 was supported in part; Al addition led to increased root concentrations of Al in 1999 and 2002 and reduced Mg/Al in 1999. Comparison of roots from subsequent root samplings showed a decrease in Al and S over time. The results illustrated that 7 years of elevated Al(tot) concentrations in the soil solution up to 200 microM are not likely to affect root growth. We also discuss possible improvements of the experimental approach.

ELEVATED CO2 AND ELEVATED TEMPERATURE HAVE NO EFFECT ON DOUGLAS-FIR FINE-ROOT DYNAMICS IN NITROGEN-POOR SOIL

Science.gov (United States)

Here, we investigate fine-root production, mortality and standing crop of Douglas-fir (Pseudotsuga menziesii) seedlings exposed to elevated atmospheric CO2 and elevated air temperature. We hypothesized that these treatments would increase fine-root production, but that mortality ...

Winter climate change and fine root biogenic silica in sugar maple trees (Acer saccharum): Implications for silica in the Anthropocene

Science.gov (United States)

Maguire, Timothy J.; Templer, Pamela H.; Battles, John J.; Fulweiler, Robinson W.

2017-03-01

Winter temperatures are projected to increase over the next century, leading to reductions in winter snowpack and increased frequency of soil freezing in many northern forest ecosystems. Here we examine biogenic silica (BSi) concentrations in sugar maple (Acer saccharum) fine roots collected from a snow manipulation experiment at Hubbard Brook Experimental Forest (New Hampshire, USA). Increased soil freezing significantly lowered the BSi content of sugar maple fine roots potentially decreasing their capacity to take up water and dissolved nutrients. The reduced silica uptake (8 ± 1 kmol silica km-2) by sugar maple fine roots is comparable to silica export from temperate forest watersheds. We estimate that fine roots account for 29% of sugar maple BSi, despite accounting for only 4% of their biomass. These results suggest that increased frequency of soil freezing will reduce silica uptake by temperate tree roots, thereby changing silica availability in downstream receiving waters.

Root Traits, Nodulation and Root Distribution in Soil for Five Wild Lentil Species and Lens culinaris (Medik. Grown under Well-Watered Conditions

Directory of Open Access Journals (Sweden)

Linda Y. Gorim

2017-09-01

Full Text Available The efficient use of resources such as water and nutrients by plants is increasingly important as the world population food demand continues to grow. With the increased production of lentil in the temperate zones of North America, improvement in yield needs to be maintained. The use of wild lentil genotypes as sources of genetic diversity for introgression into cultivated lentil is an important breeding strategy, but little is known about their root systems. We evaluated the root systems of five wild lentil species and Lens culinaris under fully watered conditions. Plants were grown in 60 cm tubes containing equal volumes of soil collected from the reconstructed A, B, and C horizons. Significant differences were observed for root traits and fine root distribution between and within species and the proportion of root biomass partitioned into each soil layer was unique for each genotype. We also observed variability in nodule number and nodule shape within and between genotypes. Some genotypes more efficiently used water for either biomass or seed production. The allocation of resources to seed production also varied between genotypes. These observations could have impact on the design of future lentil breeding in the context of strategies for managing changes in rainfall amount and distribution for lentil production ecosystems.

Can liming change root anatomy, biomass allocation and trace element distribution among plant parts of Salix × smithiana in trace element-polluted soils?

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Vondráčková, Stanislava; Tlustoš, Pavel; Száková, Jiřina

2017-08-01

Willows (Salix spp.) are considered to be effective for the phytoremediation of trace elements from contaminated soils, but their efficiency is limited in heavily polluted soils because of poor growth. Liming can be a desirable measure to decrease the plant availability of elements, resulting in improved plant development. Notably, large root area and maximum soil penetration are basic parameters that improve the efficiency of phytoremediation. The impact of soil chemical properties on willow root anatomy and the distribution of trace elements below-ground have rarely been studied. The effect of liming on root parameters, biomass allocation and trace element distribution in non-harvestable (coarse roots, fine roots, stumps) and harvestable plant parts (twigs and leaves) of Salix × smithiana was assessed at the end of a 4-year pot experiment with two trace element-polluted soils that differed in terms of soil pH. Stump biomass predominated in weakly acidic soil. In neutral soil, the majority of biomass was located in fine roots and stumps; the difference from other plant parts was minor. Trace elements were the most concentrated in fine roots. Translocation to above-ground biomass increased as follows: Pb roots roots). Lime application decreased the concentrations of mobile Cd and Zn and related levels in plants, improved biomass production and root parameters and increased the removal of all trace elements in weakly acidic soil. None or minimum differences in the monitored parameters were recorded for dolomite treatments in both soils. The dose and source of liming had crucial effects on root anatomy. Growing willows in limed trace element-polluted soils is a suitable measure for combination of two remediation strategies, i.e. phytoextraction of Cd and Zn and assisted phytostabilization of As and Pb.

Short-Term Effects of Low Intensity Thinning on the Fine Root Dynamics of Pinus massoniana Plantations in the Three Gorges Reservoir Area, China

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Yafei Shen

2017-11-01

Full Text Available Fine roots play an important role in plant growth as well as carbon (C and nutrient cycling in terrestrial ecosystems. Fine roots are important for understanding the contribution of forests to the global C cycle. Knowledge about this topic is still limited, especially regarding the effects of different forest management practices. This study investigated the seasonal dynamics of fine roots (<2 mm in masson pine (P. massoniana plantations for one year after low intensity thinning by using a sequential soil coring method. The fine roots showed pronounced seasonal dynamics, with a peak of fine root biomass (FRB occurring in September. Significant differences were noted in the seasonal dynamics of FRB for the different diameter size sub-classes (≤0.5 mm, 0.5–1 mm and 1–2 mm; also FRB was inversely related to soil depth. Moreover, the FRB (≤0.5 mm and 0.5–1 mm except 1–2 mm in the thinning plots was greater than that in the control only in the upper soil layer (0–10 cm. Furthermore, the FRB varied significantly with soil temperature, moisture and nutrients depended on the diameter sub-class considered. Significant differences in the soil temperature and moisture levels were noted between low-intensity thinned and control plots. Soil nutrient levels slightly decreased after low-intensity thinning. In addition, there was a more sensitive relationship between the very fine roots (diameter < 0.5 mm and soil nutrients. Our results showed an influence of low-intensity thinning on the fine root dynamics with a different magnitude according to fine root diameter sub-classes. These results provide a theoretical basis to promote the benefits of C cycling in the management of P. massoniana forests.

Comparative effects of simulated acid rain of different ratios of SO42- to NO3- on fine root in subtropical plantation of China.

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Liu, Xin; Zhao, Wenrui; Meng, Miaojing; Fu, Zhiyuan; Xu, Linhao; Zha, Yan; Yue, Jianmin; Zhang, Shuifeng; Zhang, Jinchi

2018-03-15

The influence of acid rain on forest trees includes direct effects on foliage as well as indirect soil-mediated effects that cause a reduction in fine-root growth. In addition, the concentration of NO 3 - in acid rain increases with the rapidly growing of nitrogen deposition. In this study, we investigated the impact of simulated acid rain with different SO 4 2- /NO 3 - (S/N) ratios, which were 5:1 (S), 1:1 (SN) and 1:5 (N), on fine-root growth from March 2015 to February 2016. Results showed that fine roots were more sensitive to the effects of acid rain than soils in the short-term. Both soil pH and fine root biomass (FRB) significantly decreased as acid rain pH decreased, and also decreased with the percentage of NO 3 - increased in acid rain. Acid rain pH significantly influenced soil total carbon and available potassium in summer. Higher acidity level (pH=2.5), especially of the N treatments, had the strongest inhibitory impact on soil microbial activity after summer. The structural equation modelling results showed that acid rain S/N ratio and pH had stronger direct effects on FRB than indirect effects via changed soil and fine root properties. Fine-root element contents and antioxidant enzymes activities were significantly affected by acid rain S/N ratio and pH during most seasons. Fine-root Al ion content, Ca/Al, Mg/Al ratios and catalase activity were used as better indicators than soil parameters for evaluating the effects of different acid rain S/N ratios and pH on forests. Our results suggest that the ratio of SO 4 2- to NO 3 - in acid rain is an important factor which could affect fine-root growth in subtropical forests of China. Copyright © 2017. Published by Elsevier B.V.

X-ray computed tomography uncovers root-root interactions: quantifying spatial relationships between interacting root systems in three dimensions.

Science.gov (United States)

Paya, Alexander M; Silverberg, Jesse L; Padgett, Jennifer; Bauerle, Taryn L

2015-01-01

Research in the field of plant biology has recently demonstrated that inter- and intra-specific interactions belowground can dramatically alter root growth. Our aim was to answer questions related to the effect of inter- vs. intra-specific interactions on the growth and utilization of undisturbed space by fine roots within three dimensions (3D) using micro X-ray computed tomography. To achieve this, Populus tremuloides (quaking aspen) and Picea mariana (black spruce) seedlings were planted into containers as either solitary individuals, or inter-/intra-specific pairs, allowed to grow for 2 months, and 3D metrics developed in order to quantify their use of belowground space. In both aspen and spruce, inter-specific root interactions produced a shift in the vertical distribution of the root system volume, and deepened the average position of root tips when compared to intra-specifically growing seedlings. Inter-specific interactions also increased the minimum distance between root tips belonging to the same root system. There was no effect of belowground interactions on the radial distribution of roots, or the directionality of lateral root growth for either species. In conclusion, we found that significant differences were observed more often when comparing controls (solitary individuals) and paired seedlings (inter- or intra-specific), than when comparing inter- and intra-specifically growing seedlings. This would indicate that competition between neighboring seedlings was more responsible for shifting fine root growth in both species than was neighbor identity. However, significant inter- vs. intra-specific differences were observed, which further emphasizes the importance of biological interactions in competition studies.

Contribution of fine tree roots to the silicon cycle in a temperate forest ecosystem developed on three soil types

Science.gov (United States)

Turpault, Marie-Pierre; Calvaruso, Christophe; Kirchen, Gil; Redon, Paul-Olivier; Cochet, Carine

2018-04-01

The role of forest vegetation in the silicon (Si) cycle has been widely examined. However, to date, little is known about the specific role of fine roots. The main objective of our study was to assess the influence of fine roots on the Si cycle in a temperate forest in north-eastern France. Silicon pools and fluxes in vegetal solid and solution phases were quantified within each ecosystem compartment, i.e. in the atmosphere, above-ground and below-ground tree tissues, forest floor and different soil layers, on three plots, each with different soil types, i.e. Dystric Cambisol (DC), Eutric Cambisol (EC) and Rendzic Leptosol (RL). In this study, we took advantage of a natural soil gradient, from shallow calcic soil to deep moderately acidic soil, with similar climates, atmospheric depositions, species compositions and management. Soil solutions were measured monthly for 4 years to study the seasonal dynamics of Si fluxes. A budget of dissolved Si (DSi) was also determined for the forest floor and soil layers. Our study highlighted the major role of fine roots in the Si cycle in forest ecosystems for all soil types. Due to the abundance of fine roots mainly in the superficial soil layers, their high Si concentration (equivalent to that of leaves and 2 orders higher than that of coarse roots) and their rapid turnover rate (approximately 1 year), the mean annual Si fluxes in fine roots in the three plots were 68 and 110 kg ha-1 yr-1 for the RL and the DC, respectively. The turnover rates of fine roots and leaves were approximately 71 and 28 % of the total Si taken up by trees each year, demonstrating the importance of biological recycling in the Si cycle in forests. Less than 1 % of the Si taken up by trees each year accumulated in the perennial tissues. This study also demonstrated the influence of soil type on the concentration of Si in the annual tissues and therefore on the Si fluxes in forests. The concentrations of Si in leaves and fine roots were approximately 1

Root production, distribution, and turnover in conventional and organic northern highbush blueberry systems

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Northern highbush blueberry (Vaccinium corymbosum L.) is a shallow-rooted crop with very fine, fibrous roots. Recently, we installed minirhizotrons (root observation tubes) in a conventional and an organic blueberry planting in western Oregon. We wanted to know exactly when and where new roots were ...

Fine-root trait plasticity of beech (Fagus sylvatica) and spruce (Picea abies) forests on two contrasting soils

NARCIS (Netherlands)

Weemstra, M.; Sterck, F.J.; Visser, Eric J.W.; Kuyper, Thomas W.; Goudzwaard, L.; Mommer, L.

2017-01-01

Aim
The fine roots of trees may show plastic responses to their resource environment. Several, contrasting hypotheses exist on this plasticity, but empirical evidence for these hypotheses is scattered. This study aims to enhance our understanding of tree root plasticity by examining

Treeline advances and associated shifts in the ground vegetation alter fine root dynamics and mycelia production in the South and Polar Urals.

Science.gov (United States)

Solly, Emily F; Djukic, Ika; Moiseev, Pavel A; Andreyashkina, Nelly I; Devi, Nadezhda M; Göransson, Hans; Mazepa, Valeriy S; Shiyatov, Stepan G; Trubina, Marina R; Schweingruber, Fritz H; Wilmking, Martin; Hagedorn, Frank

2017-02-01

Climate warming is shifting the elevational boundary between forests and tundra upwards, but the related belowground responses are poorly understood. In the pristine South and Polar Urals with shifts of the treeline ecotone documented by historical photographs, we investigated fine root dynamics and production of extramatrical mycorrhizal mycelia (EMM) along four elevational transects reaching from the closed forest to the treeless tundra. In addition, we analysed elevational differences in climate and vegetation structure, and excavated trees to estimate related changes in the partitioning between below- and aboveground biomass. Fine root biomass of trees (<2 mm) increased by 13-79% with elevation, paralleled by a 35-72% increase in ground vegetation fine roots from the closed forest to the tundra. During the first year of decomposition, mass loss of fine root litter from different vegetation types was greater at lower elevations in the forest-tundra ecotone. The ratio between fine roots of trees and stem biomass largely increased with elevation in both regions, but these increases were not accompanied by a distinct production of EMM. Production of EMM, however, increased with the presence of ectomycorrhizal trees at the transition from the tundra to the forest. Our results imply that the recorded upward expansion of forest into former tundra in the Ural Mountains by 4-8 m per decade is decreasing the partitioning of plant biomass to fine roots. They further suggest that climate-driven forest advances will alter EMM production rates with potential feedbacks on soil carbon and nutrient cycling in these ecosystems.

Standardization of 32P activity determination method in soil-root cores for root distribution studies

International Nuclear Information System (INIS)

Sharma, R.B.; Ghildyal, B.P.

1976-01-01

The root distribution of wheat variety UP 301 was obtained by determining the 32 P activity in soil-root cores by two methods, viz., ignition and triacid digestion. Root distribution obtained by these two methods was compared with that by standard root core washing procedure. The percent error in root distribution as determined by triacid digestion method was within +- 2.1 to +- 9.0 as against +- 5.5 to +- 21.2 by ignition method. Thus triacid digestion method proved better over the ignition method. (author)

Effects of liming and wood ash application on root biomass, root distribution and soil chemistry in a Norway spruce stand in southwest Sweden

Energy Technology Data Exchange (ETDEWEB)

Viebke, C.G.

2001-07-01

Effects of liming (CaPK) and wood ash application (A) on soil chemistry, root (< 2 mm and 2-5 mm in diameter) biomass and distribution, root length density (RLD, cm/cm{sup 3} ) and specific root length (SRL, m/g) were investigated in a 60 year old Norway spruce stand in SW Sweden. Soil cores were taken from the litter fermented humus (LFH) and mineral soil layers to a depth of 30 cm, eight years after treatments. The pH values of the LM layer increased significantly (p< 0.05) in the lime and ash treatments compared to the control, while in the top 5 cm of the mineral soil, pH was increased only in the A treatment compared to CaPK. The P, K, Ca and Mg concentrations increased in the CaPK treatment in the LM layer, while K and Ca decreased significantly at 5-10 cm depth in CaPK treated plots compared to the control and A. The highest amounts of ammonium and nitrate were found in A treatment in all soil layers. The A treatment increased fine root (< 2 mm in diameter) biomass in the LFH layer compared to the control but decreased it in the top 10 cm of the mineral soil compared to CaPK. A shallower fine root system was found in the A treated plots compared to the control and CaPK. The coarser root (2-5 mm in diameter) biomass was higher in the mineral soil in the A treatment compared to the control and CaPK but the differences were not significant. RLD increased in both CaPK and A in the upper soil layers. SRL increased in almost all layers in the CaPK and A treatments compared to the control. The number of root tips were also higher in the treated plots compared to the control, except in the 10-20 cm layer. It was concluded that CaPK and A treatments resulted in improved root vitality with a higher capacity for nutrient uptake.

Differences in U root-to-shoot translocation between plant species explained by U distribution in roots

Energy Technology Data Exchange (ETDEWEB)

Straczek, Anne; Duquene, Lise [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium); Wegrzynek, Dariusz [IAEA, Seibersdorf Laboratories, A-2444 Seibersdorf (Austria); Faculty of Physics and Applied Computer Science, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Krakow (Poland); Chinea-Cano, Ernesto [IAEA, Seibersdorf Laboratories, A-2444 Seibersdorf (Austria); Wannijn, Jean [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium); Navez, Jacques [Royal Museum of Africa, Department of Geology, Leuvensesteenweg 13, 3080 Tervuren (Belgium); Vandenhove, Hildegarde, E-mail: hvandenh@sckcen.b [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium)

2010-03-15

Accumulation and distribution of uranium in roots and shoots of four plants species differing in their cation exchange capacity of roots (CECR) was investigated. After exposure in hydroponics for seven days to 100 mumol U L{sup -1}, distribution of uranium in roots was investigated through chemical extraction of roots. Higher U concentrations were measured in roots of dicots which showed a higher CECR than monocot species. Chemical extractions indicated that uranium is mostly located in the apoplasm of roots of monocots but that it is predominantly located in the symplasm of roots of dicots. Translocation of U to shoot was not significantly affected by the CECR or distribution of U between symplasm and apoplasm. Distribution of uranium in roots was investigated through chemical extraction of roots for all species. Additionally, longitudinal and radial distribution of U in roots of maize and Indian mustard, respectively showing the lowest and the highest translocation, was studied following X-ray fluorescence (XRF) analysis of specific root sections. Chemical analysis and XRF analysis of roots of maize and Indian mustard clearly indicated a higher longitudinal and radial transport of uranium in roots of Indian mustard than in roots of maize, where uranium mostly accumulated in root tips. These results showed that even if CECR could partly explain U accumulation in roots, other mechanisms like radial and longitudinal transport are implied in the translocation of U to the shoot.

Differences in U root-to-shoot translocation between plant species explained by U distribution in roots

International Nuclear Information System (INIS)

Straczek, Anne; Duquene, Lise; Wegrzynek, Dariusz; Chinea-Cano, Ernesto; Wannijn, Jean; Navez, Jacques; Vandenhove, Hildegarde

2010-01-01

Accumulation and distribution of uranium in roots and shoots of four plants species differing in their cation exchange capacity of roots (CECR) was investigated. After exposure in hydroponics for seven days to 100 μmol U L -1 , distribution of uranium in roots was investigated through chemical extraction of roots. Higher U concentrations were measured in roots of dicots which showed a higher CECR than monocot species. Chemical extractions indicated that uranium is mostly located in the apoplasm of roots of monocots but that it is predominantly located in the symplasm of roots of dicots. Translocation of U to shoot was not significantly affected by the CECR or distribution of U between symplasm and apoplasm. Distribution of uranium in roots was investigated through chemical extraction of roots for all species. Additionally, longitudinal and radial distribution of U in roots of maize and Indian mustard, respectively showing the lowest and the highest translocation, was studied following X-ray fluorescence (XRF) analysis of specific root sections. Chemical analysis and XRF analysis of roots of maize and Indian mustard clearly indicated a higher longitudinal and radial transport of uranium in roots of Indian mustard than in roots of maize, where uranium mostly accumulated in root tips. These results showed that even if CECR could partly explain U accumulation in roots, other mechanisms like radial and longitudinal transport are implied in the translocation of U to the shoot.

Fine and coarse root parameters from mature black spruce displaying genetic x soil moisture interaction in growth

Science.gov (United States)

John E. Major; Kurt H. Johnsen; Debby C. Barsi; Moira Campbell

2012-01-01

Fine and coarse root biomass, C, and N mass parameters were assessed by root size and soil depths from soil cores in plots of 32-year-old black spruce (Picea mariana (Mill.) Britton, Sterns & Poggenb.) from four full-sib families studied previously for drought tolerance and differential productivity on a dry and wet...

Fine Mapping of qroot-yield-1.06, a QTL for Root, Plant Vigor and Yield in Maize

OpenAIRE

Martinez Ascanio, Ana Karine

2015-01-01

Root-yield-1.06 is a major QTL affecting root system architecture (RSA) and other agronomic traits in maize. The effect of this QTL has been evaluated with the development of near isogenic lines (NILs) differing at the QTL position. The objective of this study was to fine map qroot-yield-1.06 by marker-assisted searching for chromosome recombinants in the QTL interval and concurrent root phenotyping in both controlled and field conditions, through successive generations. Complementary approac...

Measuring and Modeling Root Distribution and Root Reinforcement in Forested Slopes for Slope Stability Calculations

Science.gov (United States)

Cohen, D.; Giadrossich, F.; Schwarz, M.; Vergani, C.

2016-12-01

Roots provide mechanical anchorage and reinforcement of soils on slopes. Roots also modify soil hydrological properties (soil moisture content, pore-water pressure, preferential flow paths) via subsurface flow path associated with root architecture, root density, and root-size distribution. Interactions of root-soil mechanical and hydrological processes are an important control of shallow landslide initiation during rainfall events and slope stability. Knowledge of root-distribution and root strength are key components to estimate slope stability in vegetated slopes and for the management of protection forest in steep mountainous area. We present data that show the importance of measuring root strength directly in the field and present methods for these measurements. These data indicate that the tensile force mobilized in roots depends on root elongation (a function of soil displacement), root size, and on whether roots break in tension of slip out of the soil. Measurements indicate that large lateral roots that cross tension cracks at the scarp are important for slope stability calculations owing to their large tensional resistance. These roots are often overlooked and when included, their strength is overestimated because extrapolated from measurements on small roots. We present planned field experiments that will measure directly the force held by roots of different sizes during the triggering of a shallow landslide by rainfall. These field data are then used in a model of root reinforcement based on fiber-bundle concepts that span different spacial scales, from a single root to the stand scale, and different time scales, from timber harvest to root decay. This model computes the strength of root bundles in tension and in compression and their effect on soil strength. Up-scaled to the stand the model yields the distribution of root reinforcement as a function of tree density, distance from tree, tree species and age with the objective of providing quantitative

Responses of fine roots and soil N availability to short-term nitrogen fertilization in a broad-leaved Korean pine mixed forest in northeastern China.

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Cunguo Wang

Full Text Available Knowledge of the responses of soil nitrogen (N availability, fine root mass, production and turnover rates to atmospheric N deposition is crucial for understanding fine root dynamics and functioning in forest ecosystems. Fine root biomass and necromass, production and turnover rates, and soil nitrate-N and ammonium-N in relation to N fertilization (50 kg N ha(-1 year(-1 were investigated in a temperate forest over the growing season of 2010, using sequential soil cores and ingrowth cores methods. N fertilization increased soil nitrate-N by 16% (P<0.001 and ammonium-N by 6% (P<0.01 compared to control plots. Fine root biomass and necromass in 0-20 cm soil were 13% (4.61 vs. 5.23 Mg ha(-1, P<0.001 and 34% (1.39 vs. 1.86 Mg ha(-1, P<0.001 less in N fertilization plots than those in control plots. The fine root mass was significantly negatively correlated with soil N availability and nitrate-N contents, especially in 0-10 cm soil layer. Both fine root production and turnover rates increased with N fertilization, indicating a rapid underground carbon cycling in environment with high nitrogen levels. Although high N supply has been widely recognized to promote aboveground growth rates, the present study suggests that high levels of nitrogen supply may reduce the pool size of the underground carbon. Hence, we conclude that high levels of atmospheric N deposition will stimulate the belowground carbon cycling, leading to changes in the carbon balance between aboveground and underground storage. The implications of the present study suggest that carbon model and prediction need to take the effects of nitrogen deposition on underground system into account.

Root distribution and its association with bean growth habit

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LUIS P.S. VELHO

2018-04-01

Full Text Available ABSTRACT Associations between root distribution and bean growth habit may contribute to the selection of genotypes adapted to restrictive environments. The present work aimed to relate and compare root distribution with the growth habit in beans. 10 bean genotypes of different growth habits (I, II and III were evaluated for root distribution in two agricultural years (2014/15 and 2015/16. The genotypes responded similarly for the trait root distribution throughout the agricultural years, without any simple effect of the genotype x year interaction. The factors genotype and years were significant for the trait. The genotypes of a determinate habit showed significant differences compared to other genotypes (II and III, which were ascribed to their poor performance in the average of years. They include the Carioca Precoce, which showed a behavior similar to the other habits. It could be considered a “plastic” genotype under restrictive conditions. The contrasts revealed significant differences between the growth habits II vs I (2.87 and III vs I (3.64 for root distribution. The differences were also significant for grain yield. Thus, genotypes of indeterminate growth habit show greater root distribution than those of a determinate habit, regardless of the agricultural years. Therefore, they are promising for use in blocks of crosses, when the purpose is the selection of cultivars adapted to low input environments.

Laser microprobe mass analysis (LAMMA) of aluminum and lead in fine roots and their ectomycorrhizal mantles of Norway spruce (Picea abies (L.) Karst.).

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Eeckhaoudt, S; Vandeputte, D; Van Praag, H; Van Grieken, R; Jacob, W

1992-03-01

Fine roots and ectomycorrhizal root tips were sampled in a Norway spruce (Picea abies (L.) Karst.) stand in the eastern part of the Belgian Ardennes. The cellular and partly subcellular localizations of aluminum and lead were identified by the micro-analytical laser microprobe mass analysis (LAMMA) technique. In fine roots with secondary structure, localization of aluminum was limited to the peripheral cell layers. Lead was found in the outer layers, and also in the primary phloem. Aluminum penetrated the mycorrhizal mantle, but lead was seldom detected in ectomycorrhizae.

Total fine root mass and nutrient content in forest ecosystems (Pinus patula Schltdl and Cham Cupressus lusitanica Mill and Quercus humboldtii bonpl.) from Piedras Blancas, Antioquia - Colombia

International Nuclear Information System (INIS)

Barreto Sanchez, Luis Hernan; Leon Pelaez, Juan Diego

2005-01-01

In the Piedras Blancas region, Antioquia - Colombia, a sampling of fine roots K > Mg > Fe > P this study sought to highlight the importance of fine roots and their concentrations of nutrients in natural forests and plantations and their relationship with nutrient cycling. For this purpose, the methodological approach comprised total root mass, both dead and alive

Mean Annual Temperature Drives Microbial Nitrogen Cycling and Fine Root Nutrient Foraging Across a Tropical Montane Wet Forest Elevation Gradient

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Pierre, S.; Litton, C. L. M.; Giardina, C. P.; Sparks, J. P.; Groffman, P. M.; Hewson, I.; Fahey, T. J.

2017-12-01

Mean annual temperature (MAT) is positively correlated with rates of primary production and carbon (C) turnover in forests globally, but the underlying biotic drivers of these relationships remain poorly resolved. We hypothesized that (1) MAT increases nitrifier abundance and thereby nitrate (NO-) bioavailability in soils and (2) increased NO- bioavailability reduces fine root nitrogen (N) demand. We used an ecologically well-constrained natural elevation gradient (13˚C -18˚C) in a tropical wet motane forest on the Island of Hawaii to study to role of MAT in situ. Our previous work showed that MAT drives increased soil NO- bioavailability in situ (r²=0.79, P=0.003), and indicated that the abundance of ammonia oxidizing archaea is strongly and positively correlated with MAT in situ (r²=0.34, Preduce fine root foraging effort. Further, higher MAT and greater N fertility in soils may reduce the C limitation of AM fungal colonization. We conclude that MAT drives N-rich conditions, which allow for lower N foraging effort, but greater C investment in P acquisition through AM fine root colonization.

Effect of water table fluctuations on phreatophytic root distribution.

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Tron, Stefania; Laio, Francesco; Ridolfi, Luca

2014-11-07

The vertical root distribution of riparian vegetation plays a relevant role in soil water balance, in the partition of water fluxes into evaporation and transpiration, in the biogeochemistry of hyporheic corridors, in river morphodynamics evolution, and in bioengineering applications. The aim of this work is to assess the effect of the stochastic variability of the river level on the root distribution of phreatophytic plants. A function describing the vertical root profile has been analytically obtained by coupling a white shot noise representation of the river level variability to a description of the dynamics of root growth and decay. The root profile depends on easily determined parameters, linked to stream dynamics, vegetation and soil characteristics. The riparian vegetation of a river characterized by a high variability turns out to have a rooting system spread over larger depths, but with shallower mean root depths. In contrast, a lower river variability determines root profiles with higher mean root depths. Copyright © 2014 Elsevier Ltd. All rights reserved.

EFFECTS OF ELEVATED CO2 AND N-FERTILIZATION ON SURVIVAL OF PONDEROSA PINE FINE ROOTS

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We used minihizaotrons to assess the effects of elevated CO2N and season on the life-span of ponderosa pine (Pinus ponderosa Dougl. Ex Laws.) fine roots. CO2 levels were ambient air (A), ambient air + 175 ?mol mol-1 (A+175) and ambient air + 350 ?mol mol-1 (A+350). N treatments ...

[Differences in root developmenly of winter wheat cultivars in Huang-Huai Plain, China].

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Qiu, Xin-Qiang; Gao, Yang; Li, Xin-Qiang; Huang, Ling; Duan, Ai-Wang

2012-07-01

Selecting one presently popularized winter wheat cultivar (Zhengmai 9023) and two cultivars (Abo and Fengchan 3) introduced in the 1950s and 1960s in Huang-Huai Plain as test materials, and by using minirhizotron technique, this paper studied the live root length, root diameter distribution, and net root growth rate of the cultivars. Fine roots with a diameter from 0.05 mm to 0.25 mm occupied the majority of the whole root system, and the fine roots with a diameter less than 0.5 mm accounted for 98% of the live root length. The average root diameter varied with plant growth, the variation range being 0.15 - 0.22 mm, and no significant difference was observe among the cultivars. The live root length was significantly positively correlated root number, suggesting that root number was the main factor for the increase of live root length. The most vigorous growth period of the roots was from reviving to jointing stage, and Abo and Fengchan 3 had a longer period increased root vitality, as compared with Zhengmai 9023. For Zhengmai 9023, its fine roots with a diameter more than 0.1 mm had an increasing proportion after jointing stage, which was helpful for improving plant resistance, root activity, and grain-filling at late growth stages.

Changes in carbon allocation to aboveground versus belowground forest components is driven by a trade-off involving mycorrhizal fungi, not fine roots

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Ouimette, A.; Ollinger, S. V.; Hobbie, E. A.; Lepine, L. C.; Stephens, R.; Rowe, R.; Vadeboncoeur, M. A.; Tumber-Davila, S. J.

2017-12-01

Species composition and resource availability exert a strong influence on the dynamics of carbon allocation among different forest ecosystem components. Recent work in temperate forests has highlighted a tradeoff between carbon allocation to aboveground woody tissues (access to light), and belowground to fine roots (access to soil nutrients). Although root-associated mycorrhizal fungi are crucial for N acquisition and can receive 20% or more of annual net primary production, most studies fail to explicitly include carbon allocation to mycorrhizal fungi. In part, this is due to the inherent difficulties in accurately quantifying fungal production. We took several approaches to quantify production of mycorrhizal fungi, including a carbon budget approach and isotopic techniques. Here we present data on patterns of carbon allocation to aboveground (wood and foliar production), and belowground components (production of fine roots and mycorrhizal fungi), across temperate forest stands spanning a range of nitrogen availability and species composition. We found that as the proportion of conifer species decreased, and stand nitrogen availability increased, both the absolute amount and the fraction of net primary production increased for foliage, aboveground wood, and fine roots ("a rising tide lifts all boats"). While allocation to plant pools increased, allocation to mycorrhizal fungi significantly decreased with decreasing conifer dominance and increasing soil nitrogen availability. We did not find a strong trade-off between carbon allocation to fine roots and aboveground wood or foliage. Instead, a negative relationship is seen between allocation to mycorrhizal fungi and other plant pools. Effort to estimate carbon allocation to mycorrhizal fungi is important for gaining a more complete understanding of how ecosystems respond to changes in growth-limiting resources.

Leaf and fine root carbon stocks and turnover are coupled across Arctic ecosystems.

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Sloan, Victoria L; Fletcher, Benjamin J; Press, Malcolm C; Williams, Mathew; Phoenix, Gareth K

2013-12-01

Estimates of vegetation carbon pools and their turnover rates are central to understanding and modelling ecosystem responses to climate change and their feedbacks to climate. In the Arctic, a region containing globally important stores of soil carbon, and where the most rapid climate change is expected over the coming century, plant communities have on average sixfold more biomass below ground than above ground, but knowledge of the root carbon pool sizes and turnover rates is limited. Here, we show that across eight plant communities, there is a significant positive relationship between leaf and fine root turnover rates (r(2) = 0.68, P turnover rates of both leaf (r(2) = 0.63, P community scale. These ecological relationships not only demonstrate close links between above and below-ground plant carbon dynamics but also allow plant carbon pool sizes and their turnover rates to be predicted from the single readily quantifiable (and remotely sensed) parameter of LAI, including the possibility of estimating root data from satellites. © 2013 John Wiley & Sons Ltd.

Root distribution pattern of Colocasia- 32P plant injection technique

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Eapen, Suja; Salam, M.A.; Wahid, P.A.

1995-01-01

A 32 P plant injection technique was employed to study the variation in the root production and distribution patterns of colocasia var. Cheruchempu grown in the coconut garden and in the open. Root production of colocasia was more with the plants grown in the open compared to the plants grown in the coconut garden. The root distribution pattern of colocasia differed with light environments under which the plants are grown. Colocasia grown in the coconut garden developed a compact root system while that grown in the open condition developed a spreading root system. The root zone comprising 20 cm laterally around the plant and 40 cm vertically from the surface (L 0-20 D 0-40 ) can be considered as the active root zone of colocasia. (author). 9 refs., 4 figs., 1 tab

Fine root status element contents in three Norway spruce stands in the Krkonose Mts

Czech Academy of Sciences Publication Activity Database

Goldbold, D.; Fritz, H.; Cudlín, Pavel; Bonifacio, E.

2003-01-01

Roč. 22, Suppl. 1 (2003), s. 91-94 ISSN 1335-342X. [Long Term Air Pollution Effect on Forest Ecosystems (International Meeting for Specialists in Air Pollution Effects on Forest Ecosystems)/20./. Zvolen, 30.08.2002-01.09.2002] R&D Projects: GA MŠk OK 355 Institutional research plan: CEZ:AV0Z6087904 Keywords : Ca:Al ratios, fine roots, spruce Subject RIV: EH - Ecology, Behaviour Impact factor: 0.100, year: 2003

Combining stable isotope and carbohydrate analyses in phloem sap and fine roots to study seasonal changes of source-sink relationships in a Mediterranean beech forest.

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Scartazza, Andrea; Moscatello, Stefano; Matteucci, Giorgio; Battistelli, Alberto; Brugnoli, Enrico

2015-08-01

Carbon isotope composition (δ(13)C) and carbohydrate content of phloem sap and fine roots were measured in a Mediterranean beech (Fagus sylvatica L.) forest throughout the growing season to study seasonal changes of source-sink relationships. Seasonal variations of δ(13)C and content of phloem sap sugars, collected during the daylight period, reflected the changes in soil and plant water status. The correlation between δ(13)C and content of phloem sap sugars, collected from plants belonging to different social classes, was significantly positive only during the driest month of July. In this month, δ(13)C of phloem sap sugars was inversely related to the increment of trunk radial growth and positively related to δ(13)C of fine roots. We conclude that the relationship between δ(13)C and the amount of phloem sap sugars is affected by a combination of causes, such as sink strength, tree social class, changes in phloem anatomy and transport capacity, and phloem loading of sugars to restore sieve tube turgor following the reduced plant water potential under drought conditions. However, δ(13)C and sugar composition of fine roots suggested that phloem transport of leaf sucrose to this belowground component was not impaired by mild drought and that sucrose was in a large part allocated towards fine roots in July, depending on tree social class. Hence, fine roots could represent a functional carbon sink during the dry seasonal periods, when transport and use of assimilates in other sink tissues are reduced. These results indicate a strict link between above- and belowground processes and highlight a rapid response of this Mediterranean forest to changes in environmental drivers to regulate source-sink relationships and carbon sink capacity. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Root distribution of rootstocks for 'Tahiti' lime

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Neves Carmen Silvia Vieira Janeiro

2004-01-01

Full Text Available Field studies on citrus roots are important for genetic selection of cultivars and for management practices such as localized irrigation and fertilization. To characterize root systems of six rootstocks, taking into consideration chemical and physical characteristics of a clayey Typic Hapludox of the Northern State of Paraná, this study was performed having as scion the 'IAC-5 Tahiti' lime [Citrus latifolia (Yu. Tanaka]. The rootstocks 'Rangpur' lime (C. limonia Osbeck, 'Africa Rough' lemon (C. jambhiri Lush., 'Sunki' mandarin [C. sunki (Hayata hort. ex Tan.], Poncirus trifoliata (L. Raf., 'C13' citrange [C. sinensis (L. Osb. x P. trifoliata (L. Raf] and 'Catânia 2' Volkamer lemon (C. volkameriana Ten. & Pasq. were used applying the trench profile method and the SIARCS® 3.0 software to determine root distribution. 'C-13' citrange had the largest root system. 'Volkamer' lemon and 'Africa Rough' lemon presented the smallest amount of roots. The effective depth for 80 % of roots was 31-53 cm in rows and 67-68 cm in inter-rows. The effective distance of 80 % of roots measured from the tree trunk exceeded the tree canopy for P. trifoliata, 'Sunki' mandarin, and 'Volkamer' and 'Africa Rough' lemons.

Root development during soil genesis: effects of root-root interactions, mycorrhizae, and substrate

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Salinas, A.; Zaharescu, D. G.

2015-12-01

A major driver of soil formation is the colonization and transformation of rock by plants and associated microbiota. In turn, substrate chemical composition can also influence the capacity for plant colonization and development. In order to better define these relationships, a mesocosm study was set up to analyze the effect mycorrhizal fungi, plant density and rock have on root development, and to determine the effect of root morphology on weathering and soil formation. We hypothesized that plant-plant and plant-fungi interactions have a stronger influence on root architecture and rock weathering than the substrate composition alone. Buffalo grass (Bouteloua dactyloides) was grown in a controlled environment in columns filled with either granular granite, schist, rhyolite or basalt. Each substrate was given two different treatments, including grass-microbes and grass-microbes-mycorrhizae and incubated for 120, 240, and 480 days. Columns were then extracted and analyzed for root morphology, fine fraction, and pore water major element content. Preliminary results showed that plants produced more biomass in rhyolite, followed by schist, basalt, and granite, indicating that substrate composition is an important driver of root development. In support of our hypothesis, mycorrhizae was a strong driver of root development by stimulating length growth, biomass production, and branching. However, average root length and branching also appeared to decrease in response to high plant density, though this trend was only present among roots with mycorrhizal fungi. Interestingly, fine fraction production was negatively correlated with average root thickness and volume. There is also slight evidence indicating that fine fraction production is more related to substrate composition than root morphology, though this data needs to be further analyzed. Our hope is that the results of this study can one day be applied to agricultural research in order to promote the production of crops

The effects of different irrigation methods on root distribution ...

African Journals Online (AJOL)

drip, subsurface drip, surface and under-tree micro sprinkler) on the root distribution, intensity and effective root depth of “Williams Pride” and “Jersey Mac” apple cultivars budded on M9, rapidly grown in Isparta Region. The rootstocks were ...

Spatial distribution of root activity of Ganesh pomegranate (Punica granatum) plants

International Nuclear Information System (INIS)

Kotur, S.C.; Keshava Murthy, S.V.

2003-01-01

Information on the root activity pattern is invaluable while adopting appropriate time and method of fertilizer application, irrigation, planting distance and other cultural practices. The pattern of root activity distribution determined using the technique of soil injection of 32 P compares well with actual pattern ascertained by root excavation method. The isotopic technique is also non-destructive, quick and inexpensive. Root activity distribution pattern has been determined using this technique in citrus, grape, mango, guava and papaya. To generate the information on inbred Ganesh pomegranate seedlings, studies were undertaken and the results are reported in this paper. (author)

Minimalistic models of the vertical distribution of roots under stochastic hydrological forcing

Science.gov (United States)

Laio, Francesco

2014-05-01

The assessment of the vertical root profile can be useful for multiple purposes: the partition of water fluxes between evaporation and transpiration, the evaluation of root soil reinforcement for bioengineering applications, the influence of roots on biogeochemical and microbial processes in the soil, etc. In water-controlled ecosystems the shape of the root profile is mainly determined by the soil moisture availability at different depths. The long term soil water balance in the root zone can be assessed by modeling the stochastic incoming and outgoing water fluxes, influenced by the stochastic rainfall pulses and/or by the water table fluctuations. Through an ecohydrological analysis one obtains that in water-controlled ecosystems the vertical root distribution is a decreasing function with depth, whose parameters depend on pedologic and climatic factors. The model can be extended to suitably account for the influence of the water table fluctuations, when the water table is shallow enough to exert an influence on root development, in which case the vertical root distribution tends to assume a non-monotonic form. In order to evaluate the validity of the ecohydrological estimation of the root profile we have tested it on a case study in the north of Tuscany (Italy). We have analyzed data from 17 landslide-prone sites: in each of these sites we have assessed the pedologic and climatic descriptors necessary to apply the model, and we have measured the mean rooting depth. The results show a quite good matching between observed and modeled mean root depths. The merit of this minimalistic approach to the modeling of the vertical root distribution relies on the fact that it allows a quantitative estimation of the main features of the vertical root distribution without resorting to time- and money-demanding measuring surveys.

Nitrogen Alters Initial Growth, Fine-Root Biomass and Soil Organic Matter Properties of a Eucalyptus dunnii Maiden Plantation in a Recently Afforested Grassland in Southern Brazil

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Gabriel W. D. Ferreira

2018-01-01

Full Text Available Nitrogen (N fertilization effects on Eucalyptus growth and soil carbon (C stocks are still controversial. We set up an N fertilization experiment in southern Brazil to evaluate initial tree growth and changes in soil organic matter (SOM. Four N levels (24–Reference, 36, 48 and 108 kg ha−1 of N were tested and tree growth was assessed during the first two years. Afterwards, representative trees were chosen to evaluate fine-root biomass (FRB and its spatial distribution. Soil was sampled to a 40-cm depth and SOM was fractionated in Particulate (POM and Mineral-Associated Organic Matter (MAOM for C and N content, and δ13C determination. Positive N effect on tree growth was seen only for tree height. N addition resulted in higher FRB. Changes in SOM were more expressive in top-soil layers. Overall, afforestation had positive effects on soil C. Increasing reference N dose resulted in higher C and N content in both SOM fractions. C and N dynamics were tightly correlated, especially in MAOM. Eucalypt-derived C was on average three-fold higher in POM. In summary, we showed that N fertilization may have positive but limited effects on tree growth, nevertheless it enhances fine-root biomass and C and N accumulation in SOM pools.

EFFECTS OF ELEVATED CO-2 AND N FERTILIZATION ON FINE ROOT DYNAMICS AND FUNGAL GROWTH IN SEEDLING PINUS PONDEROSA

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The effects of elevated CO-2 and N fertilization on fine root growth of Pinus ponderosa Dougl. ex P. Laws. C. Laws., grown in native soil in open-top field-exposure chambers at Placerville, CA, were monitored for a 2-year period using minirhizotrons. The experimental design was a...

Micro-PIXE evaluation of Fe distribution in barley roots

International Nuclear Information System (INIS)

Schneider, T.; Povh, B.; Strasser, O.; Gierth, M.; Przybylowicz, W.; Mesjasz-Przybylowicz, J.; Churms, C.; Schuessler, A.

1999-01-01

High Fe concentrations were reported from roots of plants grown in soil. This has been discussed as a possible Fe source for plants, since the concentrations shown in the roots were much higher than in the shoots. There are, however, also some indications that soil contamination at the root surface of soil grown plants could have led to an overestimation of the Fe concentration in roots. Fe distribution in root cross sections of barley (Hordeum vulgare L. cv. Alexis) has been studied to investigate this hypothesis. Micro-PIXE analyses in point and mapping mode were complemented by the STIM technique. Based on the correlation between Fe and soil-related elements (Ti, Al and Si), most of Fe located at the root surface could be attributed to soil contamination. It could also be shown that this soil contamination leads to an overestimation of Fe concentration in roots. (author)

Effects of acid deposition on tree roots

Energy Technology Data Exchange (ETDEWEB)

Persson, H. [Swedish Univ. of Agricultural Sciences (Sweden). Dept. of Ecology and Environmental Research

1995-12-31

Large forest regions in SW Sweden have been exposed to high levels of acid deposition for many decades, causing soil acidification in forest soils. Historically, SO{sub 2} has been the major acidification agent, but lately nitrogen compounds increasingly have become important. The amount and chemical form of nitrogen strongly affects the pH in the rhizosphere and rhizoplane. Many forest stands show a positive growth response to increased nitrogen input, even in heavily N-loaded areas. Nitrogen fertilization experiments suggest that part of the increased forest production is caused by a translocation of biomass production from below-ground to above-ground parts. At the same time fine-root growth dynamics are strongly affected by the high N supply. Deficiencies of various nutrients (Mg,Ca,K,Mn and Zn) obtained from needle analyses have been reported from different Picea abies stands. In areas with more extensive acidification and nutrient leaching, a decline in tree vitality has been observed. Although deficiency symptoms in forest trees may be reflected in nitrogen/cation ratios in fine roots, few attempts have been made to explain forest damage symptoms from fine-root chemistry. Root damage is often described as a decline in the amount of living fine roots, an increase in the amount of dead versus live fine roots (a lower live/dead ratio) and an increasing amount of dead medium and coarse roots. The primary objectives of the present presentation were to analyse available data on the effects of high nitrogen and sulphur deposition on mineral nutrient balance in tree fine roots and to evaluate the risk of Al interference with cation uptake by roots

Effects of acid deposition on tree roots

Energy Technology Data Exchange (ETDEWEB)

Persson, H [Swedish Univ. of Agricultural Sciences (Sweden). Dept. of Ecology and Environmental Research

1996-12-31

Large forest regions in SW Sweden have been exposed to high levels of acid deposition for many decades, causing soil acidification in forest soils. Historically, SO{sub 2} has been the major acidification agent, but lately nitrogen compounds increasingly have become important. The amount and chemical form of nitrogen strongly affects the pH in the rhizosphere and rhizoplane. Many forest stands show a positive growth response to increased nitrogen input, even in heavily N-loaded areas. Nitrogen fertilization experiments suggest that part of the increased forest production is caused by a translocation of biomass production from below-ground to above-ground parts. At the same time fine-root growth dynamics are strongly affected by the high N supply. Deficiencies of various nutrients (Mg,Ca,K,Mn and Zn) obtained from needle analyses have been reported from different Picea abies stands. In areas with more extensive acidification and nutrient leaching, a decline in tree vitality has been observed. Although deficiency symptoms in forest trees may be reflected in nitrogen/cation ratios in fine roots, few attempts have been made to explain forest damage symptoms from fine-root chemistry. Root damage is often described as a decline in the amount of living fine roots, an increase in the amount of dead versus live fine roots (a lower live/dead ratio) and an increasing amount of dead medium and coarse roots. The primary objectives of the present presentation were to analyse available data on the effects of high nitrogen and sulphur deposition on mineral nutrient balance in tree fine roots and to evaluate the risk of Al interference with cation uptake by roots

CO2 AND N-FERTILIZATION EFFECTS ON FINE ROOT LENGTH, PRODUCTION, AND MORTALITY: A 4-YEAR PONDEROSA PINE STUDY

Science.gov (United States)

We conducted a 4-year study of Pinus ponderosa fine root (<2 mm) responses to atmospheric CO2 and N-fertilization. Seedlings were grown in open-top chambers at 3 CO2 levels (ambient, ambient+175 mol/mol, ambient+350 mol/mol) and 3 N-fertilization levels (0, 10, 20 g?m-2?yr-1). ...

Spatial root distribution of plants growing in vertical media for use in living walls

DEFF Research Database (Denmark)

Jørgensen, Lars; Dresbøll, Dorte Bodin; Thorup-Kristensen, Kristian

2014-01-01

Background and Aims: For plants growing in living walls, the growth potential is correlated to the roots ability to utilize resources in all parts of the growing medium and thereby to the spatial root distribution. The aim of the study was to test how spatial root distribution was affected...... root growth was limited for plants in the middle or lower parts of the medium and 15N measurements confirmed that only plants in the bottom of the box had active roots in the bottom of the medium. The species differed in root architecture and spatial root distribution. Conclusions: The choice...... by growing medium, planting position and competition from other plants. Methods: Five species (Campanula poscharskyana cv. 'Stella', Fragaria vesca cv. 'Småland', Geranium sanguineum cv. 'Max Frei', Sesleria heufleriana and Veronica officinalis cv. 'Allgrün') were grown in three growing media (coir and two...

The distribution of 32P in the rice plant applied to a single root and to the whole root system

International Nuclear Information System (INIS)

Sisworo, E.L.; Gandanegara, S.; Sisworo, W.H.; Rasyid, H.; Sumarna, Nana

1982-01-01

Two greenhouse experiments to study the distribution of 32 P applied to a single root and to the whole root system have been carried out. Data from experiment 1 showed that 32 P activity in shoots rose with the progress of time; where 32 P was applied to a single root 6 hours after isotope application the 32 P activity in the shoots of plants was higher than if the isotope was applied to the whole root system. Three hours after 32 P application, plants with 50% of roots had a higher 32 P activity than plants with no root cutting. Data from experiment 2 showed that 32 P activity of plants that received 32 P through a single root only was lower than those that received 32 P through the whole root system. This was in contradiction with the data obtained in experiment 1. Experiment 2 also showed that 32 P activity increased with time. Autoradiographs of plants in experiment 1 and 2 showed that 32 P was distributed through the whole plant, although when the isotope was only applied to a single root. (author)

Incorporation of 13C labeled Pinus ponderosa needle and fine root litter into soil organic matter measured by Py-GC/MS-C-IRMS

Science.gov (United States)

Mambelli, S.; Gleixner, G.; Dawson, T. E.; Bird, J. A.; Torn, M. S.

2006-12-01

Developing effective strategies for enhancing C storage in soils requires understanding the influence of plant C quality. In turn, plant C quality impacts the decay continuum between plant residue and humified, stable SOM. This remains one of the least understood aspects of soil biogeochemistry. We investigated the initial phase of incorporation of 13C labeled Pinus ponderosa needle and fine root litter into SOM. The two litter types were placed in separate microcosms in the A horizon in a temperate conifer soil. Curie-point pyrolysis-gas chromatography coupled with on-line mass spectrometry and isotope ratio mass spectrometry (Py-GC/MS-C- IRMS) were used to determine the identity and the 13C enrichment of pyrolysis products (fragments of carbohydrates, lignin, proteins and lipids). We compared the two initial litter types, needles and fine roots, to samples of the bulk soil (A horizon, < 2mm) and soil humin fraction (from chemical solubility) obtained from each microcosm 1.5y after litter addition. Pyrolysis of plant material and SOM produced 56 suitable products for isotopic analysis; of them, 15 occurred in both the litter and bulk soil, 7 in both the litter and the humin fraction and 9 in both bulk soil and the humin fraction. The pyrolysis products found in common in the plant and soil were related either to polysaccharides or were non-specific and could have originated from various precursors. The data suggest that the majority of plant inputs, both from needles or fine roots, were degraded very rapidly. In the humin fraction, the most recalcitrant pool of C in soil, with a measured turnover time of 260y (this soil), only products from the fragmentation of polysaccharides and alkyl-benzene compounds were found. Comparisons of the enrichment normalized by input level suggest little difference between the incorporation of C from needles versus fine roots into SOM. The most enriched fragments in the humin fraction were products from polysaccharides degradation

Root distribution pattern of flue-cured tobacco in light and heavy soils

International Nuclear Information System (INIS)

Nagaraj, G.; Gopalachari, N.C.

1977-01-01

Root distribution of flue-cured tobacco (variety : Kanakaprabha) in clayey and loamy sand soils was studied with the help of 32 P wick feeding technique. About 90 percent of the roots of tobacco plant in black soil on 40th day and in light soil on 60th day are present in a soil core of diameter 40 cm and depth 30 cm. On the 90th day of growth stage, no significant differences were observed in the root distribution of tobacco between the two types of soil. About 85 percent of the roots were present in a soil core of diameter 40 cm and depth 30 cm on 90th day in both the soils. (author)

Adaptive root foraging strategies along a boreal-temperate forest gradient.

Science.gov (United States)

Ostonen, Ivika; Truu, Marika; Helmisaari, Heljä-Sisko; Lukac, Martin; Borken, Werner; Vanguelova, Elena; Godbold, Douglas L; Lõhmus, Krista; Zang, Ulrich; Tedersoo, Leho; Preem, Jens-Konrad; Rosenvald, Katrin; Aosaar, Jürgen; Armolaitis, Kęstutis; Frey, Jane; Kabral, Naima; Kukumägi, Mai; Leppälammi-Kujansuu, Jaana; Lindroos, Antti-Jussi; Merilä, Päivi; Napa, Ülle; Nöjd, Pekka; Parts, Kaarin; Uri, Veiko; Varik, Mats; Truu, Jaak

2017-08-01

The tree root-mycorhizosphere plays a key role in resource uptake, but also in the adaptation of forests to changing environments. The adaptive foraging mechanisms of ectomycorrhizal (EcM) and fine roots of Picea abies, Pinus sylvestris and Betula pendula were evaluated along a gradient from temperate to subarctic boreal forest (38 sites between latitudes 48°N and 69°N) in Europe. Variables describing tree resource uptake structures and processes (absorptive fine root biomass and morphology, nitrogen (N) concentration in absorptive roots, extramatrical mycelium (EMM) biomass, community structure of root-associated EcM fungi, soil and rhizosphere bacteria) were used to analyse relationships between root system functional traits and climate, soil and stand characteristics. Absorptive fine root biomass per stand basal area increased significantly from temperate to boreal forests, coinciding with longer and thinner root tips with higher tissue density, smaller EMM biomass per root length and a shift in soil microbial community structure. The soil carbon (C) : N ratio was found to explain most of the variability in absorptive fine root and EMM biomass, root tissue density, N concentration and rhizosphere bacterial community structure. We suggest a concept of absorptive fine root foraging strategies involving both qualitative and quantitative changes in the root-mycorrhiza-bacteria continuum along climate and soil C : N gradients. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Community-Weighted Mean Plant Traits Predict Small Scale Distribution of Insect Root Herbivore Abundance.

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Ilja Sonnemann

Full Text Available Small scale distribution of insect root herbivores may promote plant species diversity by creating patches of different herbivore pressure. However, determinants of small scale distribution of insect root herbivores, and impact of land use intensity on their small scale distribution are largely unknown. We sampled insect root herbivores and measured vegetation parameters and soil water content along transects in grasslands of different management intensity in three regions in Germany. We calculated community-weighted mean plant traits to test whether the functional plant community composition determines the small scale distribution of insect root herbivores. To analyze spatial patterns in plant species and trait composition and insect root herbivore abundance we computed Mantel correlograms. Insect root herbivores mainly comprised click beetle (Coleoptera, Elateridae larvae (43% in the investigated grasslands. Total insect root herbivore numbers were positively related to community-weighted mean traits indicating high plant growth rates and biomass (specific leaf area, reproductive- and vegetative plant height, and negatively related to plant traits indicating poor tissue quality (leaf C/N ratio. Generalist Elaterid larvae, when analyzed independently, were also positively related to high plant growth rates and furthermore to root dry mass, but were not related to tissue quality. Insect root herbivore numbers were not related to plant cover, plant species richness and soil water content. Plant species composition and to a lesser extent plant trait composition displayed spatial autocorrelation, which was not influenced by land use intensity. Insect root herbivore abundance was not spatially autocorrelated. We conclude that in semi-natural grasslands with a high share of generalist insect root herbivores, insect root herbivores affiliate with large, fast growing plants, presumably because of availability of high quantities of food. Affiliation of

Root structure-function relationships in 74 species: evidence of a root economics spectrum related to carbon economy.

Science.gov (United States)

Roumet, Catherine; Birouste, Marine; Picon-Cochard, Catherine; Ghestem, Murielle; Osman, Normaniza; Vrignon-Brenas, Sylvain; Cao, Kun-Fang; Stokes, Alexia

2016-05-01

Although fine roots are important components of the global carbon cycle, there is limited understanding of root structure-function relationships among species. We determined whether root respiration rate and decomposability, two key processes driving carbon cycling but always studied separately, varied with root morphological and chemical traits, in a coordinated way that would demonstrate the existence of a root economics spectrum (RES). Twelve traits were measured on fine roots (diameter ≤ 2 mm) of 74 species (31 graminoids and 43 herbaceous and dwarf shrub eudicots) collected in three biomes. The findings of this study support the existence of a RES representing an axis of trait variation in which root respiration was positively correlated to nitrogen concentration and specific root length and negatively correlated to the root dry matter content, lignin : nitrogen ratio and the remaining mass after decomposition. This pattern of traits was highly consistent within graminoids but less consistent within eudicots, as a result of an uncoupling between decomposability and morphology, and of heterogeneity of individual roots of eudicots within the fine-root pool. The positive relationship found between root respiration and decomposability is essential for a better understanding of vegetation-soil feedbacks and for improving terrestrial biosphere models predicting the consequences of plant community changes for carbon cycling. © 2016 CNRS. New Phytologist © 2016 New Phytologist Trust.

SPATIAL AND VERTICAL DISTRIBUTION OF LITTER AND BELOWGROUND CARBON IN A BRAZILIAN CERRADO VEGETATION

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Vinícius Augusto Morais

2017-03-01

Full Text Available Forest ecosystems contribute significantly to store greenhouse gases. This paper aimed to investigate the spatial and vertical distribution of litter, roots, and soil carbon. We obtained biomass and carbon of compartments (litter, roots, and soil in a vegetation from Cerrado biome, state of Minas Gerais, Brazil. The materials were collected in 7 0.5 m² sub-plots randomly allocated in the vegetation. Root and soil samples were taken from five soil layers across the 0-100 cm depth. Roots were classified into three diameter classes: fine (10 mm roots. The carbon stock was mapped through geostatistical analysis. The results indicated averages of soil carbon stock of 208.5 Mg.ha-1 (94.6% of the total carbon, root carbon of 6.8 Mg.ha-1 (3.1%, and litter of 5 Mg.ha-1 (2.3%. The root carbon was majority stored in coarse roots (83%, followed by fine (10%, and medium roots (7%. The largest portion of fine roots concentrated in the 0-10 cm soil depth, whereas medium and coarse roots were majority in the 10-20 cm depth. The largest portion of soil (53% and root (85% carbon were stored in superficial soil layers (above 40 cm. As conclusion, the carbon spatial distribution follows a reasonable trend among the compartments. There is a vertical relation of which the deeper the soil layer, the lower the soil and root carbon stock. Excepting the shallowest layer, coarse roots held the largest portion of carbon across the evaluated soil layers.

A Metabolomic Approach for the Discrimination of Red Ginseng Root Parts and Targeted Validation.

Science.gov (United States)

In, Gyo; Seo, Hyun Kyu; Park, Hee-Won; Jang, Kyoung Hwa

2017-03-15

Ginsenosides are used as existing markers of red ginseng (RG) quality, and ginsenoside ratios are also indicative of the different components of red ginseng. For the analysis and classification of ginsenoside content, red ginseng was separated into three parts, namely, main roots, lateral roots, and fine roots, and each extract was subjected to ultra-performance liquid chromatography quadruple time-of-flight mass spectrometry (UPLC-QToF-MS) with multivariate statistical analysis. Principal component analysis (PCA) showed a clear discrimination between the extracts of main roots and fine roots and suggested discrimination markers (four for the main roots and five for the fine roots). The fine root markers were identified as ginsenoside. We identified two markers for the main roots of red ginseng in this study. Moreover, the contents of 22 ginsenosides were analyzed in all three components of red ginseng. Fine roots have the highest protopanaxadiol (PPD)/protopanaxatriol (PPT) ratio. The PPD group of ginsenosides, which is quantitatively dominant in fine roots, clearly distinguishes the main roots from the other parts.

Different Phylogenetic and Environmental Controls of First-order Root Morphological and Chemical Traits

Science.gov (United States)

Wang, R.; Wang, Q.; Zhao, N.; Yu, G.; He, N.

2017-12-01

Fine roots are the most distal roots that act as the primary belowground organs in acquiring limiting nutrients and water from the soil. However, limited by the inconsistency in definitions of fine roots and the different protocols among studies, knowledge of root system traits has, to date, still lagged far behind our understanding of above-ground traits. In particular, whether variation in fine root traits among the plant species along a single root economics spectrum and this underlying mechanism are still hotly debated. In this study, we sampled the first-order root using the standardized protocols, and measured six important root traits related to resource use strategies, from 181 plant species from subtropical to boreal forests. Base on this large dataset, we concluded that different phylogenetic and environmental factors affected on root thickness and nutrient, resulting in the decoupled pattern between them. Specifically, variation in species-level traits related to root thickness (including root diameter, RD and specific root length, SRL) was restricted by common ancestry and little plastic to the changing environments, whereas the large-scale variation in woody root nutrient was mainly controlled by environmental differences, especially soil variables. For community-level traits, mean annual temperature (MAT) mainly influenced the community-level root thickness through the direct effect of changes in plant species composition, while soil P had a positive influence effect on community-level root nitrogen concentration (CWM_RN), reflecting the strong influence of soil fertility on belowground root nutrient. The different environmental constraints and selective pressures acting between root thickness and nutrient traits allows for multiple ecological strategies to adapt to complex environmental conditions. In addition, strong relationships between community-level root traits and environmental variables, due to environmental filters, indicate that in contrast

Studies on photosynthate distribution and root exudates of cinesische by 14C tracer technique

International Nuclear Information System (INIS)

Chen Junwei; Ni Zhuru; Liu Zhihong; Fu Zhijian

1994-01-01

Cinesische (Cunninghamia sinesis R. Br.) plants grown in nutrient solution were exposed to 14 CO 2 for 24 hours to study the photosynthate distribution and root exudates. One day after feeding 14 CO 2 , the majority of 14 C assimilate was remained in leaves, only 27.38% of 14 C assimilate was translocated into new shoots, main branches, lateral branches and roots. 3 days after feeding 14 CO 2 , the distribution rate of 14 C photosynthate in leaves was still the highest, but the percentage decreased and it correspondingly increased in other plant parts. 22 days after feeding 14 CO 2 , the distribution rate in new shoots became the highest, roots ranked the second, main branches were the third, leaves and lateral branches were the lowest. The photosynthate in the root could rapidly convert into root exudates. The amount of root exudates reached a peak after 4 days of feeding 14 CO 2 , afterward the amount of 14 C root exudates decreased rapidly. The amount of sugar was the highest among all kinds of root exudates, the amount of organic acid was the second, the content of amino acid was much lower than that of the other two root exudates

Evaluating ecohydrological theories of woody root distribution in the Kalahari.

Directory of Open Access Journals (Sweden)

Abinash Bhattachan

Full Text Available The contribution of savannas to global carbon storage is poorly understood, in part due to lack of knowledge of the amount of belowground biomass. In these ecosystems, the coexistence of woody and herbaceous life forms is often explained on the basis of belowground interactions among roots. However, the distribution of root biomass in savannas has seldom been investigated, and the dependence of root biomass on rainfall regime remains unclear, particularly for woody plants. Here we investigate patterns of belowground woody biomass along a rainfall gradient in the Kalahari of southern Africa, a region with consistent sandy soils. We test the hypotheses that (1 the root depth increases with mean annual precipitation (root optimality and plant hydrotropism hypothesis, and (2 the root-to-shoot ratio increases with decreasing mean annual rainfall (functional equilibrium hypothesis. Both hypotheses have been previously assessed for herbaceous vegetation using global root data sets. Our data do not support these hypotheses for the case of woody plants in savannas. We find that in the Kalahari, the root profiles of woody plants do not become deeper with increasing mean annual precipitation, whereas the root-to-shoot ratios decrease along a gradient of increasing aridity.

Numerical distribution functions of fractional unit root and cointegration tests

DEFF Research Database (Denmark)

MacKinnon, James G.; Nielsen, Morten Ørregaard

We calculate numerically the asymptotic distribution functions of likelihood ratio tests for fractional unit roots and cointegration rank. Because these distributions depend on a real-valued parameter, b, which must be estimated, simple tabulation is not feasible. Partly due to the presence...

A quantitative analysis of fine scale distribution of intertidal meiofauna in response to food resources

Digital Repository Service at National Institute of Oceanography (India)

Ansari, Z.A.; Gauns, M.

Fine scale vertical and spatial distribution of meiofauna in relation to food abundance was studied in the intertidal sediment at Dias Beach. The major abiotic factors showed significant changes and progressive fine scale decrease in vertical...

Six-Year Nitrogen–Water Interaction Shifts the Frequency Distribution and Size Inequality of the First-Order Roots of Fraxinus mandschurica in a Mixed Mature Pinus koraiensis Forest

Science.gov (United States)

Wang, Cunguo; Geng, Zhenzhen; Chen, Zhao; Li, Jiandong; Guo, Wei; Zhao, Tian-Hong; Cao, Ying; Shen, Si; Jin, Daming; Li, Mai-He

2017-01-01

The variation in fine root traits in terms of size inequality at the individual root level can be identified as a strategy for adapting to the drastic changes in soil water and nutrient availabilities. The Gini and Lorenz asymmetry coefficients have been applied to describe the overall degree of size inequality, which, however, are neglected when conventional statistical means are calculated. Here, we used the Gini coefficient, Lorenz asymmetry coefficient and statistical mean in an investigation of Fraxinus mandschurica roots in a mixed mature Pinus koraiensis forest on Changbai Mountain, China. We analyzed 967 individual roots to determine the responses of length, diameter and area of the first-order roots and of branching intensity to 6 years of nitrogen addition (N), rainfall reduction (W) and their combination (NW). We found that first-order roots had a significantly greater average length and area but had smaller Gini coefficients in NW plots compared to in control plots (CK). Furthermore, the relationship between first-order root length and branching intensity was negative in CK, N, and W plots but positive in NW plots. The Lorenz asymmetry coefficient was >1 for the first-order root diameter in NW and W plots as well as for branching intensity in N plots. The bimodal frequency distribution of the first-order root length in NW plots differed clearly from the unimodal one in CK, N, and W plots. These results demonstrate that not only the mean but also the variation and the distribution mode of the first-order roots of F. mandschurica respond to soil nitrogen and water availability. The changes in size inequality of the first-order root traits suggest that Gini and Lorenz asymmetry coefficients can serve as informative parameters in ecological investigations of roots to improve our ability to predict how trees will respond to a changing climate at the individual root level. PMID:29018474

Six-Year Nitrogen-Water Interaction Shifts the Frequency Distribution and Size Inequality of the First-Order Roots of Fraxinus mandschurica in a Mixed Mature Pinus koraiensis Forest.

Science.gov (United States)

Wang, Cunguo; Geng, Zhenzhen; Chen, Zhao; Li, Jiandong; Guo, Wei; Zhao, Tian-Hong; Cao, Ying; Shen, Si; Jin, Daming; Li, Mai-He

2017-01-01

The variation in fine root traits in terms of size inequality at the individual root level can be identified as a strategy for adapting to the drastic changes in soil water and nutrient availabilities. The Gini and Lorenz asymmetry coefficients have been applied to describe the overall degree of size inequality, which, however, are neglected when conventional statistical means are calculated. Here, we used the Gini coefficient, Lorenz asymmetry coefficient and statistical mean in an investigation of Fraxinus mandschurica roots in a mixed mature Pinus koraiensis forest on Changbai Mountain, China. We analyzed 967 individual roots to determine the responses of length, diameter and area of the first-order roots and of branching intensity to 6 years of nitrogen addition (N), rainfall reduction (W) and their combination (NW). We found that first-order roots had a significantly greater average length and area but had smaller Gini coefficients in NW plots compared to in control plots (CK). Furthermore, the relationship between first-order root length and branching intensity was negative in CK, N, and W plots but positive in NW plots. The Lorenz asymmetry coefficient was >1 for the first-order root diameter in NW and W plots as well as for branching intensity in N plots. The bimodal frequency distribution of the first-order root length in NW plots differed clearly from the unimodal one in CK, N, and W plots. These results demonstrate that not only the mean but also the variation and the distribution mode of the first-order roots of F. mandschurica respond to soil nitrogen and water availability. The changes in size inequality of the first-order root traits suggest that Gini and Lorenz asymmetry coefficients can serve as informative parameters in ecological investigations of roots to improve our ability to predict how trees will respond to a changing climate at the individual root level.

Improved Root Normal Size Distributions for Liquid Atomization

Science.gov (United States)

2015-11-01

ANSI Std. Z39.18 j CONVERSION TABLE Conversion Factors for U.S. Customary to metric (SI) units of measurement. MULTIPLY BY TO...Gray (Gy) coulomb /kilogram (C/kg) second (s) kilogram (kg) kilo pascal (kPa) 1 Improved Root Normal Size Distributions for Liquid

Predictive Modelling to Identify Near-Shore, Fine-Scale Seabird Distributions during the Breeding Season.

Science.gov (United States)

Warwick-Evans, Victoria C; Atkinson, Philip W; Robinson, Leonie A; Green, Jonathan A

2016-01-01

During the breeding season seabirds are constrained to coastal areas and are restricted in their movements, spending much of their time in near-shore waters either loafing or foraging. However, in using these areas they may be threatened by anthropogenic activities such as fishing, watersports and coastal developments including marine renewable energy installations. Although many studies describe large scale interactions between seabirds and the environment, the drivers behind near-shore, fine-scale distributions are not well understood. For example, Alderney is an important breeding ground for many species of seabird and has a diversity of human uses of the marine environment, thus providing an ideal location to investigate the near-shore fine-scale interactions between seabirds and the environment. We used vantage point observations of seabird distribution, collected during the 2013 breeding season in order to identify and quantify some of the environmental variables affecting the near-shore, fine-scale distribution of seabirds in Alderney's coastal waters. We validate the models with observation data collected in 2014 and show that water depth, distance to the intertidal zone, and distance to the nearest seabird nest are key predictors in the distribution of Alderney's seabirds. AUC values for each species suggest that these models perform well, although the model for shags performed better than those for auks and gulls. While further unexplained underlying localised variation in the environmental conditions will undoubtedly effect the fine-scale distribution of seabirds in near-shore waters we demonstrate the potential of this approach in marine planning and decision making.

Predictive Modelling to Identify Near-Shore, Fine-Scale Seabird Distributions during the Breeding Season.

Directory of Open Access Journals (Sweden)

Victoria C Warwick-Evans

Full Text Available During the breeding season seabirds are constrained to coastal areas and are restricted in their movements, spending much of their time in near-shore waters either loafing or foraging. However, in using these areas they may be threatened by anthropogenic activities such as fishing, watersports and coastal developments including marine renewable energy installations. Although many studies describe large scale interactions between seabirds and the environment, the drivers behind near-shore, fine-scale distributions are not well understood. For example, Alderney is an important breeding ground for many species of seabird and has a diversity of human uses of the marine environment, thus providing an ideal location to investigate the near-shore fine-scale interactions between seabirds and the environment. We used vantage point observations of seabird distribution, collected during the 2013 breeding season in order to identify and quantify some of the environmental variables affecting the near-shore, fine-scale distribution of seabirds in Alderney's coastal waters. We validate the models with observation data collected in 2014 and show that water depth, distance to the intertidal zone, and distance to the nearest seabird nest are key predictors in the distribution of Alderney's seabirds. AUC values for each species suggest that these models perform well, although the model for shags performed better than those for auks and gulls. While further unexplained underlying localised variation in the environmental conditions will undoubtedly effect the fine-scale distribution of seabirds in near-shore waters we demonstrate the potential of this approach in marine planning and decision making.

Root distribution of paddy and wheat grown on differing soil and water conditions

International Nuclear Information System (INIS)

Jha, M.N.; Subbiah, B.V.

1977-01-01

Two varieties of paddy and one variety of wheat were grown on two soil texture types - paddy on silty clay loam and wheat on sandy loam. Wheat crop was grown on a well drained plot and given normally scheduled irrigation while paddy was given normal and restricted irrigation. The root distribution pattern of these crops was determined. Under normal irrigation, NP 130 showed greater proportion of roots in a soil zone of 16 cm depth and 16.5 cm lateral distance. In case of Padma, the trend was similar to NP 130. More roots were found in a soil zone of 8 cm depth and 22.5 cm lateral distance. Under restricted irrigation, NP 130 showed greater proportion upto 16 cm depth and 22.5 cm lateral distance. In case of Padma, larger proportion of roots was found to be in a soil zone of 8 cm depth and 16.5 cm lateral distance. The root distribution of wheat described almost cylindrical geometry with little overall lateral growth. Regardless of treatments, roots showed a tendency to describe a cylindrical geometry (of about 1.5 cm dia and 32 cm depth). Water stress does effect the root distribution pattern of crops. Other conditions remaining the same, the narrow root cylinder described by the crops of paddy and wheat could possibly be a genetically controlled behaviour. 32 P plant injection technique was used in the study. (author)

Fine-scale spatial distribution of orchid mycorrhizal fungi in the soil of host-rich grasslands.

Science.gov (United States)

Voyron, Samuele; Ercole, Enrico; Ghignone, Stefano; Perotto, Silvia; Girlanda, Mariangela

2017-02-01

Mycorrhizal fungi are essential for the survival of orchid seedlings under natural conditions. The distribution of these fungi in soil can constrain the establishment and resulting spatial arrangement of orchids at the local scale, but the actual extent of occurrence and spatial patterns of orchid mycorrhizal (OrM) fungi in soil remain largely unknown. We addressed the fine-scale spatial distribution of OrM fungi in two orchid-rich Mediterranean grasslands by means of high-throughput sequencing of fungal ITS2 amplicons, obtained from soil samples collected either directly beneath or at a distance from adult Anacamptis morio and Ophrys sphegodes plants. Like ectomycorrhizal and arbuscular mycobionts, OrM fungi (tulasnelloid, ceratobasidioid, sebacinoid and pezizoid fungi) exhibited significant horizontal spatial autocorrelation in soil. However, OrM fungal read numbers did not correlate with distance from adult orchid plants, and several of these fungi were extremely sporadic or undetected even in the soil samples containing the orchid roots. Orchid mycorrhizal 'rhizoctonias' are commonly regarded as unspecialized saprotrophs. The sporadic occurrence of mycobionts of grassland orchids in host-rich stands questions the view of these mycorrhizal fungi as capable of sustained growth in soil. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Root distribution pattern and their contribution in photosynthesis and biomass in Jerusalem artichoke under drought

International Nuclear Information System (INIS)

Puangbut, D.; Vorasoot, N.

2018-01-01

Root length density and rooting depth have been established as drought resistant traits and these could be used as selection criteria for drought resistant genotype in many plant species. However, information on deep rooting and the root distribution pattern of Jerusalem artichoke under drought conditions is not well documented in the literature. The objective of this study was to investigate the root distribution pattern in Jerusalem artichoke genotypes under irrigated and drought conditions. This experiment was conducted within a greenhouse using rhizoboxes. Three Jerusalem artichoke genotypes were tested under two water regimes (irrigated and drought). A 2 × 3 factorial experiment was arranged in a randomized complete block design with three replications over two years. Data were recorded for root traits, photosynthesis and biomass at 30 days after imposing drought. The drought decreased root length, root surface area and root dry weight, while increased the root: shoot ratio, root distribution in the deeper soil and the percentage of root length at deeper in the soil, when compared to the irrigated conditions JA-5 and JA-60 showed high root length in the lower soil profile under drought conditions, indicating these genotypes could be identified as drought resistant genotype. The highest positive correlation was found between root length at deeper soil layer with relative water content (RWC), net photosynthetic rate (Pn) and biomass. It is expected that selection of Jerusalem artichoke with high root length coupled with maintaining high RWC and their promotion to Pn could improve the biomass and tuber yield under drought conditions. (author)

Hardpan and maize root distribution under conservation and ...

African Journals Online (AJOL)

Hardpan and maize root distribution under conservation and conventional tillage in agro-ecological zone IIa, Zambia. ... There is no scientific basis for the recommendation given to farmers by agricultural extension workers to “break the hardpan” in fields under manual or animal tillage in the study areas. Key Words: Soil ...

Spatial distribution of enzyme activities along the root and in the rhizosphere of different plants

Science.gov (United States)

Razavi, Bahar S.; Zarebanadkouki, Mohsen; Blagodatskaya, Evgenia; Kuzyakov, Yakov

2015-04-01

Extracellular enzymes are important for decomposition of many biological macromolecules abundant in soil such as cellulose, hemicelluloses and proteins. Activities of enzymes produced by both plant roots and microbes are the primary biological drivers of organic matter decomposition and nutrient cycling. So far acquisition of in situ data about local activity of different enzymes in soil has been challenged. That is why there is an urgent need in spatially explicit methods such as 2-D zymography to determine the variation of enzymes along the roots in different plants. Here, we developed further the zymography technique in order to quantitatively visualize the enzyme activities (Spohn and Kuzyakov, 2013), with a better spatial resolution We grew Maize (Zea mays L.) and Lentil (Lens culinaris) in rhizoboxes under optimum conditions for 21 days to study spatial distribution of enzyme activity in soil and along roots. We visualized the 2D distribution of the activity of three enzymes:β-glucosidase, leucine amino peptidase and phosphatase, using fluorogenically labelled substrates. Spatial resolution of fluorescent images was improved by direct application of a substrate saturated membrane to the soil-root system. The newly-developed direct zymography shows different pattern of spatial distribution of enzyme activity along roots and soil of different plants. We observed a uniform distribution of enzyme activities along the root system of Lentil. However, root system of Maize demonstrated inhomogeneity of enzyme activities. The apical part of an individual root (root tip) in maize showed the highest activity. The activity of all enzymes was the highest at vicinity of the roots and it decreased towards the bulk soil. Spatial patterns of enzyme activities as a function of distance from the root surface were enzyme specific, with highest extension for phosphatase. We conclude that improved zymography is promising in situ technique to analyze, visualize and quantify

Root length, biomass, tissue chemistry and mycorrhizal colonization following 14 years of CO2 enrichment and 6 years of N fertilization in a warm temperate forest.

Science.gov (United States)

Taylor, Benton N; Strand, Allan E; Cooper, Emily R; Beidler, Katilyn V; Schönholz, Marcos; Pritchard, Seth G

2014-09-01

Root systems serve important roles in carbon (C) storage and resource acquisition required for the increased photosynthesis expected in CO2-enriched atmospheres. For these reasons, understanding the changes in size, distribution and tissue chemistry of roots is central to predicting the ability of forests to capture anthropogenic CO2. We sampled 8000 cm(3) soil monoliths in a pine forest exposed to 14 years of free-air-CO2-enrichment and 6 years of nitrogen (N) fertilization to determine changes in root length, biomass, tissue C : N and mycorrhizal colonization. CO2 fumigation led to greater root length (98%) in unfertilized plots, but root biomass increases under elevated CO2 were only found for roots biomass in N-fertilized plots (19%), but fine root [N] and [C] both increased under N fertilization (29 and 2%, respectively). Mycorrhizal root tip biomass responded positively to CO2 fumigation in unfertilized plots, but was unaffected by CO2 under N fertilization. Changes in fine root [N] and [C] call for further study of the effects of N fertilization on fine root function. Here, we show that the stimulation of pine roots by elevated CO2 persisted after 14 years of fumigation, and that trees did not rely exclusively on increased mycorrhizal associations to acquire greater amounts of required N in CO2-enriched plots. Stimulation of root systems by CO2 enrichment was seen primarily for fine root length rather than biomass. This observation indicates that studies measuring only biomass might overlook shifts in root systems that better reflect treatment effects on the potential for soil resource uptake. These results suggest an increase in fine root exploration as a primary means for acquiring additional soil resources under elevated CO2. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

On the asymptotic distribution of a unit root test against ESTAR alternatives

NARCIS (Netherlands)

Hanck, Christoph

We derive the null distribution of the nonlinear unit root test proposed in Kapetanios et al. [Kapetanios, G., Shin, Y., Snell, A., 2003. Testing for a unit root in the nonlinear STAR framework, journal of Econometrics 112, 359-379] when nonzero means or both means and deterministic trends are

Root and soil carbon distribution at shoulderslope and footslope positions of temperate toposequences cropped to winter wheat

DEFF Research Database (Denmark)

Chirinda, Ngoni; Roncossek, Svenja Doreen; Heckrath, Goswin Johann

2014-01-01

Crop root residues are an important source of soil organic carbon (SOC) in arable systems. However, the spatial distribution of root biomass in arable systems remains largely unknown. In this study, we determined the spatial distribution of macro-root and shoot biomass of winter wheat at shoulder...

Fine-scale spatial distribution of plants and resources on a sandy soil in the Sahel

NARCIS (Netherlands)

Rietkerk, M.G.; Ouedraogo, T.; Kumar, L.; Sanou, S.; Langevelde, F. van; Kiema, A.; Koppel, J. van de; Andel, J. van; Hearne, J.; Skidmore, A.K.; Ridder, N. de; Stroosnijder, L.; Prins, H.H.T.

2002-01-01

We studied fine-scale spatial plant distribution in relation to the spatial distribution of erodible soil particles, organic matter, nutrients and soil water on a sandy to sandy loam soil in the Sahel. We hypothesized that the distribution of annual plants would be highly spatially autocorrelated

Gene tree rooting methods give distributions that mimic the coalescent process.

Science.gov (United States)

Tian, Yuan; Kubatko, Laura S

2014-01-01

Multi-locus phylogenetic inference is commonly carried out via models that incorporate the coalescent process to model the possibility that incomplete lineage sorting leads to incongruence between gene trees and the species tree. An interesting question that arises in this context is whether data "fit" the coalescent model. Previous work (Rosenfeld et al., 2012) has suggested that rooting of gene trees may account for variation in empirical data that has been previously attributed to the coalescent process. We examine this possibility using simulated data. We show that, in the case of four taxa, the distribution of gene trees observed from rooting estimated gene trees with either the molecular clock or with outgroup rooting can be closely matched by the distribution predicted by the coalescent model with specific choices of species tree branch lengths. We apply commonly-used coalescent-based methods of species tree inference to assess their performance in these situations. Copyright © 2013 Elsevier Inc. All rights reserved.

Effect of soil water content on spatial distribution of root exudates and mucilage in the rhizosphere

Science.gov (United States)

Holz, Maire; Zarebanadkouki, Mohsen; Kuzyakov, Yakov; Carminati, Andrea

2016-04-01

Water and nutrients are expected to become the major factors limiting food production. Plant roots employ various mechanisms to increase the access to these limited soil resources. Low molecular root exudates released into the rhizosphere increase nutrient availability, while mucilage improves water availability under low moisture conditions. However, studies on the spatial distribution and quantification of exudates in soil are scarce. Our aim was therefore to quantify and visualize root exudates and mucilage distribution around growing roots using neutron radiography and 14C imaging at different levels of water stress. Maize plants were grown in rhizotrons filled with a silty soil and were exposed to varying soil conditions, from optimal to dry. Mucilage distribution around the roots was estimated from the profiles of water content in the rhizosphere - note that mucilage increases the soil water content. The profiles of water content around different root types and root ages were measured with neutron radiography. Rhizosphere extension was approx. 0.7 mm and did not differ between wet and dry treatments. However, water content (i.e. mucilage concentration) in the rhizosphere of plants grown in dry soils was higher than for plants grown under optimal conditions. This effect was particularly pronounced near the tips of lateral roots. The higher water contents near the root are explained as the water retained by mucilage. 14C imaging of root after 14CO2 labeling of shoots (Pausch and Kuzyakov 2011) was used to estimate the distribution of all rhizodeposits. Two days after labelling, 14C distribution was measured using phosphor-imaging. To quantify 14C in the rhizosphere a calibration was carried out by adding given amounts of 14C-glucose to soil. Plants grown in wet soil transported a higher percentage of 14C to the roots (14Croot/14Cshoot), compared to plants grown under dry conditions (46 vs. 36 %). However, the percentage of 14C allocated from roots to

Effects of contrasting rooting distribution patterns on plant transpiration along a precipitation gradient

Science.gov (United States)

Understanding and predicting ecosystem functioning in water limited ecosystems requires a thorough assessment of the role plant root systems. Widespread ecological phenomena such as shrub encroachment may drastically change root distribution in the soil profile affecting the uptake of water and nutr...

Briquetting of coal fines and sawdust - effect of particle-size distribution

Energy Technology Data Exchange (ETDEWEB)

Patil, D.P.; Taulbee, D.; Parekh, B.K.; Honaker, R. [University of Kentucky, Lexington, KY (United States). Center for Applied Energy Research

2009-07-01

The coal industry usually discards fine-size (-150 microns) coal because of its high-moisture content and handling problems. One avenue for utilization is to either pelletize or briquette this material. However, industry has not adopted this route due in large part to significant drying and binder costs. In an effort to reduce these costs, compacting and briquetting studies were conducted to determine the effect of combining a coarse (1.18x0.15mm) spiral separator product with a fine coal flotation product (-150microns), with and without adding sawdust. Maximizing the packing density of the coal and wood waste mixture could potentially reduce the binder requirement by minimizing the void space as well as reducing shipping costs. Accordingly, work reported here focused on evaluating the impact of the particle-size distribution of different blends of fine and coarse coal, with and without sawdust and/or binder. The modified Proctor density of compacted blends along with the porosity and compressive strengths of briquettes made from each blend were determined. For the coal-only blends, the packing density was maximized by a relatively high (70% to 80%) coarse coal content. However, the packing density did not correlate with the compressive strength of the briquette that instead maximized with 100% fine flotation coal and continuously decreased as higher proportions of coarse coal were added. Similar compaction and compressive-strength results were obtained with mixtures of sawdust and varying proportions of coarse and fine coal. With the addition of a binder, the highest strengths were no longer obtained with 100% fine coal but instead maximized between 20% and 50% coarse coal addition depending on how long the briquettes were cured.

Technical note: Application of geophysical tools for tree root studies in forest ecosystems in complex soils

Directory of Open Access Journals (Sweden)

U. Rodríguez-Robles

2017-11-01

Full Text Available While semiarid forests frequently colonize rocky substrates, knowledge is scarce on how roots garner resources in these extreme habitats. The Sierra San Miguelito Volcanic Complex in central Mexico exhibits shallow soils and impermeable rhyolitic-rock outcrops, which impede water movement and root placement beyond the soil matrix. However, rock fractures, exfoliated rocks and soil pockets potentially permit downward water percolation and root growth. With ground-penetrating radar (GPR and electrical resistivity tomography (ERT, two geophysical methods advocated by Jayawickreme et al. (2014 to advance root ecology, we advanced in the method development studying root and water distribution in shallow rocky soils and rock fractures in a semiarid forest. We calibrated geophysical images with in situ root measurements, and then extrapolated root distribution over larger areas. Using GPR shielded antennas, we identified both fine and coarse pine and oak roots from 0.6 to 7.5 cm diameter at different depths into either soil or rock fractures. We also detected, trees anchoring their trunks using coarse roots underneath rock outcroppings. With ERT, we tracked monthly changes in humidity at the soil–bedrock interface, which clearly explained spatial root distribution of both tree species. Geophysical methods have enormous potential in elucidating root ecology. More interdisciplinary research could advance our understanding in belowground ecological niche functions and their role in forest ecohydrology and productivity.

Relocation of carbon from decomposition of {sup 14}C-labelled needle and fine root litter in peat soil

Energy Technology Data Exchange (ETDEWEB)

Domish, T; Laine, J; Laiho, R [Helsinki Univ. (Finland). Dept. of Forest Ecology; Finer, L [Finnish Forest Research Inst. (Finland). Joensuu Research Station; Karsisto, M [Finnish Forest Research Inst. (Finland). Dept. of Forest Ecology

1997-12-31

Drainage of peatlands promotes a shift of biomass and production from the ground vegetation to the trees. Thus, the above-ground (e.g. needles) and below-ground (roots) litter production of trees increases. Fine roots in particular are an important factor in the carbon and nutrient cycle in forest ecosystems. A major part of the annual net primary production of trees may be allocated below ground, the relative proportion being smaller on fertile sites than on less fertile ones. For modelling the carbon balance of drained peatlands, it is important to know the fate of carbon from newly introduced and decomposing litter. Newly added and fertilised tree litter material may be decomposed at a rate different than litter from the ground vegetation. The objectives of this study are to study the pathways of decomposing litter carbon in peat soil and to evaluate the use of the litterbag method in a controlled environment. (9 refs.)

Relocation of carbon from decomposition of {sup 14}C-labelled needle and fine root litter in peat soil

Energy Technology Data Exchange (ETDEWEB)

Domish, T.; Laine, J.; Laiho, R. [Helsinki Univ. (Finland). Dept. of Forest Ecology; Finer, L. [Finnish Forest Research Inst. (Finland). Joensuu Research Station; Karsisto, M. [Finnish Forest Research Inst. (Finland). Dept. of Forest Ecology

1996-12-31

Drainage of peatlands promotes a shift of biomass and production from the ground vegetation to the trees. Thus, the above-ground (e.g. needles) and below-ground (roots) litter production of trees increases. Fine roots in particular are an important factor in the carbon and nutrient cycle in forest ecosystems. A major part of the annual net primary production of trees may be allocated below ground, the relative proportion being smaller on fertile sites than on less fertile ones. For modelling the carbon balance of drained peatlands, it is important to know the fate of carbon from newly introduced and decomposing litter. Newly added and fertilised tree litter material may be decomposed at a rate different than litter from the ground vegetation. The objectives of this study are to study the pathways of decomposing litter carbon in peat soil and to evaluate the use of the litterbag method in a controlled environment. (9 refs.)

Nonparametric Fine Tuning of Mixtures: Application to Non-Life Insurance Claims Distribution Estimation

Science.gov (United States)

Sardet, Laure; Patilea, Valentin

When pricing a specific insurance premium, actuary needs to evaluate the claims cost distribution for the warranty. Traditional actuarial methods use parametric specifications to model claims distribution, like lognormal, Weibull and Pareto laws. Mixtures of such distributions allow to improve the flexibility of the parametric approach and seem to be quite well-adapted to capture the skewness, the long tails as well as the unobserved heterogeneity among the claims. In this paper, instead of looking for a finely tuned mixture with many components, we choose a parsimonious mixture modeling, typically a two or three-component mixture. Next, we use the mixture cumulative distribution function (CDF) to transform data into the unit interval where we apply a beta-kernel smoothing procedure. A bandwidth rule adapted to our methodology is proposed. Finally, the beta-kernel density estimate is back-transformed to recover an estimate of the original claims density. The beta-kernel smoothing provides an automatic fine-tuning of the parsimonious mixture and thus avoids inference in more complex mixture models with many parameters. We investigate the empirical performance of the new method in the estimation of the quantiles with simulated nonnegative data and the quantiles of the individual claims distribution in a non-life insurance application.

Growth of plant root cultures in liquid- and gas-dispersed reactor environments.

Science.gov (United States)

McKelvey, S A; Gehrig, J A; Hollar, K A; Curtis, W R

1993-01-01

The growth of Agrobacterium transformed "hairy root" cultures of Hyoscyamus muticus was examined in various liquid- and gas-dispersed bioreactor configurations. Reactor runs were replicated to provide statistical comparisons of nutrient availability on culture performance. Accumulated tissue mass in submerged air-sparged reactors was 31% of gyratory shake-flask controls. Experiments demonstrate that poor performance of sparged reactors is not due to bubble shear damage, carbon dioxide stripping, settling, or flotation of roots. Impaired oxygen transfer due to channeling and stagnation of the liquid phase are the apparent causes of poor growth. Roots grown on a medium-perfused inclined plane grew at 48% of gyratory controls. This demonstrates the ability of cultures to partially compensate for poor liquid distribution through vascular transport of nutrients. A reactor configuration in which the medium is sprayed over the roots and permitted to drain down through the root tissue was able to provide growth rates which are statistically indistinguishable (95% T-test) from gyratory shake-flask controls. In this type of spray/trickle-bed configuration, it is shown that distribution of the roots becomes a key factor in controlling the rate of growth. Implications of these results regarding design and scale-up of bioreactors to produce fine chemicals from root cultures are discussed.

Root anatomy and element distribution vary between two Salix caprea isolates with different Cd accumulation capacities

International Nuclear Information System (INIS)

Vaculík, Marek; Konlechner, Cornelia; Langer, Ingrid; Adlassnig, Wolfram; Puschenreiter, Markus; Lux, Alexander; Hauser, Marie-Theres

2012-01-01

The understanding of the influence of toxic elements on root anatomy and element distribution is still limited. This study describes anatomical responses, metal accumulation and element distribution of rooted cuttings of Salix caprea after exposure to Cd and/or Zn. Differences in the development of apoplastic barriers and tissue organization in roots between two distinct S. caprea isolates with divergent Cd uptake and accumulation capacities in leaves might reflect an adaptive predisposition based on different natural origins. Energy-dispersive X-ray spectroscopy (EDX) revealed that Cd and Zn interfered with the distribution of elements in a tissue- and isolate-specific manner. Zinc, Ca, Mg, Na and Si were enriched in the peripheral bark, K and S in the phloem and Cd in both vascular tissues. Si levels were lower in the superior Cd translocator. Since the cuttings originated from stocks isolated from polluted and unpolluted sites we probably uncovered different strategies against toxic elements. - Highlights: ► We describe responses in roots of S. caprea exposed to Cd and Zn. ► Apoplastic barrier development varied among isolates from differently polluted sites. ► EDX analyses revealed variations of element distributions in root tissues. ► Si weight% was lower in the isolate with a higher Cd translocation capacity. ► S. caprea isolates possessed different strategies to respond to Cd and Zn. - S. caprea altered element distribution and translocation, apoplastic barrier development and root anatomy upon Cd and/or Zn exposure.

Distribution of copper and other elements in ryegrass roots, determined with a scanning proton microprobe

International Nuclear Information System (INIS)

Mazzolini, A.P.; Legge, G.J.F.

1982-01-01

A scanning proton microprobe has been used to determine the distribution of Cu and other elements in Wimmera ryegrass roots grown in solution cultures. Cu was found to be localized on or near the surface of the roots in randomly distributed discrete zones. The distribution of Cu was partially correlated with those of Fe, P and Ca and possibly indicates some form of association; co-precipitation in a precipitate of ferric phosphate or hydroxy-oxide is favoured

The relation between fine root density and proximity of stems in closed Douglas-fir plantations on homogen[e]ous sandy soils: implications for sampling design

NARCIS (Netherlands)

Olsthoorn, A.F.M.; Klap, J.M.; Oude Voshaar, J.H.

1999-01-01

Studies have been carried out in two fully stocked, fast growing Douglas-fir plantations of the Dutch ACIFORN project in three consecutive years, to obtain information on fine root densities (Olsthoorn 1991). For the present paper, data collected in early summer 1987 were used to study the relation

Tillage and Water Deficit Stress Effects on Corn (Zea mays, L.) Root Distribution

Science.gov (United States)

One goal of soil management is to provide optimum conditions for root growth. Corn root distributions were measured in 2004 from a crop rotation – tillage experiment that was started in 2000. Corn was grown either following corn or following sunflower with either no till or deep chisel tillage. Wate...

Distribution of root exudates and mucilage in the rhizosphere: combining 14C imaging with neutron radiography

Science.gov (United States)

Holz, Maire; Carminati, Andrea; Kuzyakov, Yakov

2015-04-01

Water and nutrients will be the major factors limiting food production in future. Plant roots employ various mechanisms to increase the access to limited soil resources. Low molecular weight organic substances released by roots into the rhizosphere increase nutrient availability by interactions with microorganisms, while mucilage improves water availability under low moisture conditions. Though composition and quality of these substances have intensively been investigated, studies on the spatial distribution and quantification of exudates in soil are scarce. Our aim was to quantify and visualize root exudates and mucilage distribution around growing roots using neutron radiography and 14C imaging depending on drought stress. Plants were grown in rhizotrons well suited for neutron radiography and 14C imaging. Plants were exposed to various soil water contents experiencing different levels of drought stress. The water content in the rhizosphere was imaged during several drying/wetting cycles by neutron radiography. The radiographs taken a few hours after irrigation showed a wet region around the root tips showing the allocation and distribution of mucilage. The increased water content in the rhizosphere of the young root segments was related to mucilage concentrations by parameterization described in Kroener et al. (2014). In parallel 14C imaging of root after 14CO2 labeling of shoots (Pausch and Kuzyakov 2011) showed distribution of rhizodeposits including mucilage. Three days after setting the water content, plants were labeled in 14CO2 atmosphere. Two days later 14C distribution in soil was imaged by placing a phosphor-imaging plate on the rhizobox. To quantify rhizodeposition, 14C activity on the image was related to the absolute 14C activity in the soil and root after destructive sampling. By comparing the amounts of mucilage (neutron radiography) with the amount of total root derived C (14C imaging), we were able to differentiate between mucilage and root

Temperature drives global patterns in forest biomass distribution in leaves, stems, and roots.

Science.gov (United States)

Reich, Peter B; Luo, Yunjian; Bradford, John B; Poorter, Hendrik; Perry, Charles H; Oleksyn, Jacek

2014-09-23

Whether the fraction of total forest biomass distributed in roots, stems, or leaves varies systematically across geographic gradients remains unknown despite its importance for understanding forest ecology and modeling global carbon cycles. It has been hypothesized that plants should maintain proportionally more biomass in the organ that acquires the most limiting resource. Accordingly, we hypothesize greater biomass distribution in roots and less in stems and foliage in increasingly arid climates and in colder environments at high latitudes. Such a strategy would increase uptake of soil water in dry conditions and of soil nutrients in cold soils, where they are at low supply and are less mobile. We use a large global biomass dataset (>6,200 forests from 61 countries, across a 40 °C gradient in mean annual temperature) to address these questions. Climate metrics involving temperature were better predictors of biomass partitioning than those involving moisture availability, because, surprisingly, fractional distribution of biomass to roots or foliage was unrelated to aridity. In contrast, in increasingly cold climates, the proportion of total forest biomass in roots was greater and in foliage was smaller for both angiosperm and gymnosperm forests. These findings support hypotheses about adaptive strategies of forest trees to temperature and provide biogeographically explicit relationships to improve ecosystem and earth system models. They also will allow, for the first time to our knowledge, representations of root carbon pools that consider biogeographic differences, which are useful for quantifying whole-ecosystem carbon stocks and cycles and for assessing the impact of climate change on forest carbon dynamics.

Dissipation and distribution of chlorpyrifos in selected vegetables through foliage and root uptake.

Science.gov (United States)

Ge, Jing; Lu, Mengxiao; Wang, Donglan; Zhang, Zhiyong; Liu, Xianjin; Yu, Xiangyang

2016-02-01

Dissipation, distribution and uptake pathways of chlorpyrifos were investigated in pakchoi (Brassica chinensis L.) and lettuce (Lactuca sativa) with foliage treatments under a greenhouse trial and root treatments under a hydroponic experiment. The dissipation trends were similar for chlorpyrifos in pakchoi and lettuce with different treatments. More than 94% of chlorpyrifos was degraded in the samples for both of the vegetables 21 days after the foliage treatments. For the root treatment, the dissipation rate of chlorpyrifos in pakchoi and lettuce at the low concentration was greater than 93%, however, for the high concentrations, the dissipation rates were all under 90%. Both shoots and roots of the vegetables were able to absorb chlorpyrifos from the environment and distribute it inside the plants. Root concentration factor (RCF) values at different concentrations with the hydroponic experiment ranged from 5 to 39 for pakchoi, and from 14 to 35 for lettuce. The translocation factor (TF) representing the capability of the vegetables to translocate contaminants was significantly different for pakchoi and lettuce with foliage and root treatments. The values of TF with foliage treatments ranged from 0.003 to 0.22 for pakchoi, and from 0.032 to 1.63 for lettuce. The values of TF with root treatments ranged from 0.01 to 0.17 for pakchoi, and from 0.003 to 0.23 for lettuce. Significant difference of TF was found between pakchoi and lettuce with foliage treatments, and at high concentrations (10 and 50 mg L(-1)) with root treatments as well. However, there was no significant difference of TF between pakchoi and lettuce at 1 mg L(-1) with root treatment. Copyright © 2015 Elsevier Ltd. All rights reserved.

Comparison of leaf smearing and wick feeding techniques for root distribution studies of tobacco (Nicotiana tabacum)

International Nuclear Information System (INIS)

Nagaraj, G.; Hanumantha Rao, A.; Gopalachari, N.C.

1976-01-01

Wick feeding and leaf smearing methods have been compared for their relative efficiencies for root distribution studies with tobacco plant. The applied radioactivity gets equilibrated within 3 days in the tobacco plant. Root sections of the plants fed through the wick contained higher quantity for the radioactivity over those of the leaf smeared ones. Because of the case of application and better translocation of applied radioactivity the wick-feeding method appears to have good utility for root distribution studies with hard stemmed plants. (author)

Distribution of implanted ions in seeds and roots of mung bean

International Nuclear Information System (INIS)

Liu Donghua; Wang Wei; Jiang Wusheng; Zhang Zhixiang; Hou Wenqiang; Guo Ximing; Li Yi

1998-01-01

Doses of 1 x 10 16 , and 2 x 10 16 cm -2 and 1 x 10 16 , 2 x 10 16 , 3 x 10 16 and 3.6 x 10 16 cm -2 for iron and copper ions are implanted in dry seeds of mung bean, respectively. The results show that the accumulated-copper and -iron ion amounts in the seeds and roots vary with different doses of ion beam, and the fresh and dry weights of the roots decrease progressively with increasing iron and copper doses, except the treatment of 1 x 10 16 Cu + ions/cm 2 , and the accumulated-copper and -iron ion amounts in the seeds of the different test groups can be correlated with the ion distribution in the roots

Acclimation and soil moisture constrain sugar maple root respiration in experimentally warmed soil.

Science.gov (United States)

Jarvi, Mickey P; Burton, Andrew J

2013-09-01

The response of root respiration to warmer soil can affect ecosystem carbon (C) allocation and the strength of positive feedbacks between climatic warming and soil CO2 efflux. This study sought to determine whether fine-root (maple (Acer saccharum Marsh.)-dominated northern hardwood forest would adjust to experimentally warmed soil, reducing C return to the atmosphere at the ecosystem scale to levels lower than that would be expected using an exponential temperature response function. Infrared heating lamps were used to warm the soil (+4 to +5 °C) in a mature sugar maple forest in a fully factorial design, including water additions used to offset the effects of warming-induced dry soil. Fine-root-specific respiration rates, root biomass, root nitrogen (N) concentration, soil temperature and soil moisture were measured from 2009 to 2011, with experimental treatments conducted from late 2010 to 2011. Partial acclimation of fine-root respiration to soil warming occurred, with soil moisture deficit further constraining specific respiration rates in heated plots. Fine-root biomass and N concentration remained unchanged. Over the 2011 growing season, ecosystem root respiration was not significantly greater in warmed soil. This result would not be predicted by models that allow respiration to increase exponentially with temperature and do not directly reduce root respiration in drier soil.

Carbon transfer from photosynthesis to below ground fine root/hyphae respiration in Quercus serrata using stable carbon isotope pulse labeling

Science.gov (United States)

Dannoura, M.; Kominami, Y.; Takanashi, S.; Takahashi, K.

2013-12-01

Studying carbon allocation in trees is a key to better understand belowground carbon cycle and its response to climate change. Tracing 13C in tree and soil compartments after pulse labeling is one of powerful tool to study the fate of carbon in forest ecosystems. This experiment was conducted in Yamashiro experimental forest, Kyoto, Japan. Annual mean temperature and precipitation from 1994 to 2009 are 15.5 ° C and 1,388 mm respectively. The branch pulse labeling were done 7 times in 2011 using same branch of Quercus serrata (H:11.7 m, DBH; 33.7 cm) to see seasonal variations of carbon velocity. Whole crown labeling of Quercus serrata (H:9 m, DBH; 13.7 cm) was done in 2012 to study carbon allocation and to especially focus on belowground carbon flux until to the hyphae respiration. Pure 13CO2 (99.9%) was injected to the labeling chamber which was set to branch or crown. Then, after one hour of branch labeling and 3.5 hour for crown labeling, the chamber was opened. Trunk respiration chambers, fine root chambers and hyphae chambers were set to the target tree to trace labeled carbon in the CO2 efflux. 41 μm mesh was used to exclude ingrowth of roots into hyphae chambers. The results show that the velocity of carbon through the tree varied seasonally, with higher velocity in summer than autumn, averaging 0.47 m h-1. Half-lives of labeled carbon in autotrophic respiration were similar above and below ground during the growing season, but they were twice longer in trunk than in root in autumn. From the whole crown labeling done end of growing season, the 13CO2 signal was observed 25 hours after labeling in trunk chamber and 34-37.7 hours after labeling in fine root and hyphae respiration almost simultaneously. Half-lives of 13 was longer in trunk than below ground. Trunk respiration was still using labelled carbon during winter suggesting that winter trunk respiration is partly fueled by carbon stored in the trunk at the end of the growing season.

Distribution of polycyclic aromatic hydrocarbons in subcellular root tissues of ryegrass (Lolium multiflorum Lam.)

Science.gov (United States)

2010-01-01

Background Because of the increasing quantity and high toxicity to humans of polycyclic aromatic hydrocarbons (PAHs) in the environment, several bioremediation mechanisms and protocols have been investigated to restore PAH-contaminated sites. The transport of organic contaminants among plant cells via tissues and their partition in roots, stalks, and leaves resulting from transpiration and lipid content have been extensively investigated. However, information about PAH distributions in intracellular tissues is lacking, thus limiting the further development of a mechanism-based phytoremediation strategy to improve treatment efficiency. Results Pyrene exhibited higher uptake and was more recalcitrant to metabolism in ryegrass roots than was phenanthrene. The kinetic processes of uptake from ryegrass culture medium revealed that these two PAHs were first adsorbed onto root cell walls, and they then penetrated cell membranes and were distributed in intracellular organelle fractions. At the beginning of uptake (< 50 h), adsorption to cell walls dominated the subcellular partitioning of the PAHs. After 96 h of uptake, the subcellular partition of PAHs approached a stable state in the plant water system, with the proportion of PAH distributed in subcellular fractions being controlled by the lipid contents of each component. Phenanthrene and pyrene primarily accumulated in plant root cell walls and organelles, with about 45% of PAHs in each of these two fractions, and the remainder was retained in the dissolved fraction of the cells. Because of its higher lipophilicity, pyrene displayed greater accumulation factors in subcellular walls and organelle fractions than did phenanthrene. Conclusions Transpiration and the lipid content of root cell fractions are the main drivers of the subcellular partition of PAHs in roots. Initially, PAHs adsorb to plant cell walls, and they then gradually diffuse into subcellular fractions of tissues. The lipid content of intracellular

Sediment studies at Bikini Atoll part 1. distribution of fine and coarse components in surface sediments

International Nuclear Information System (INIS)

Noshkin, V. E.; Eagle, R.J.; Robison, W.L.

1997-01-01

In 1979, 21 years after the moratorium on nuclear testing in the Marshall Islands, surface sediment samples (to depths of 2 and 4 cm) were collected from 87 locations over the floor of Bikini lagoon. The main purpose for the collections was to map the distribution of long- lived man-made radionuclides associated with the bottom material. In addition the samples were processed to estimate the fraction of fine and coarse components to show what modifications occurred since the sediment composition was first described in samples collected before testing in 1946. In this report a comparison is made of the amount and distribution of fine material associated with the lagoon surface sediment before and after the testing of nuclear devices. Nuclear testing produced more finely divided material in-the surface sediment layer over large areas of the lagoon and especially in regions of the lagoon and reef adjacent to test sites. Five cratering events at Bikini Atoll generated sufficient material to account for the inventory of new fine material found over the bottom surface of the lagoon. Although the fraction of fine material in the bottom sediments was altered by the nuclear events, the combined processes of formation, transport and deposition were not sufficiently dynamic to alter the geographical features of the major sedimentary components over most of the lagoon floor

Sediment studies at Bikini Atoll part 1. distribution of fine and coarse components in surface sediments

Energy Technology Data Exchange (ETDEWEB)

Noshkin, V. E.; Eagle, R.J.; Robison, W.L.

1997-01-01

In 1979, 21 years after the moratorium on nuclear testing in the Marshall Islands, surface sediment samples (to depths of 2 and 4 cm) were collected from 87 locations over the floor of Bikini lagoon. The main purpose for the collections was to map the distribution of long- lived man-made radionuclides associated with the bottom material. In addition the samples were processed to estimate the fraction of fine and coarse components to show what modifications occurred since the sediment composition was first described in samples collected before testing in 1946. In this report a comparison is made of the amount and distribution of fine material associated with the lagoon surface sediment before and after the testing of nuclear devices. Nuclear testing produced more finely divided material in-the surface sediment layer over large areas of the lagoon and especially in regions of the lagoon and reef adjacent to test sites. Five cratering events at Bikini Atoll generated sufficient material to account for the inventory of new fine material found over the bottom surface of the lagoon. Although the fraction of fine material in the bottom sediments was altered by the nuclear events, the combined processes of formation, transport and deposition were not sufficiently dynamic to alter the geographical features of the major sedimentary components over most of the lagoon floor.

Influence of Olea europea L. and Ficus Carrica L. fine root activity on the K biodisponibility and clay mineralogy of the rhizosphere

Directory of Open Access Journals (Sweden)

Sophia Mouas-Bourbia

2015-10-01

Full Text Available The objective of this study was to compare the effect of fine root activity of Olea europea L. and Ficus carrica L. of soil in its immediate vicinity (in the so-called rhizosphere zone. The study was conducted on two stations in Northern Algeria: Guendoul and Bouira. Olea europea L. and Ficus carrica L. roots significantly modified some chemical properties of rhizosphere soil. Increases of soil carbon, KNH4+ and KHNO3- were observed in the Olea europea L. and Ficus carrica L rhizosphere soil at both stations. Bulk and rhizosphere soil clay mineralogy was similar. Interstratified illite-smectite, smectite-illite and illite were predominant in the clay fraction. Chlorite and kaolinite were less represented. The decomposition of XRD diffractograms of two soil clay fractions using the Decomp program revealed that Olea europea L. roots promote nK+ storage in interlayer position. Indeed, the lower abscissa position of the gravity center (cg of the X-ray patterns, the peak displacement of clays populations PCI, I/S, S/I toward illite peak position indicates an increase of “illite-like” layer content in the vicinity of Olea europea L. roots. Olea europea L. roots appeared to have more influence on the rhizosphere soil than Ficus carrica L. roots probably because of its higher root biomass and the greater activity of the tree in winter (contrary to Ficus Carrica L., Olea europea L. keep their leaves in winter. The two species underground activity seems to be well reflected in their respective rhizosphere.

In situ detection of tree root distribution and biomass by multi-electrode resistivity imaging.

Science.gov (United States)

Amato, Mariana; Basso, Bruno; Celano, Giuseppe; Bitella, Giovanni; Morelli, Gianfranco; Rossi, Roberta

2008-10-01

Traditional methods for studying tree roots are destructive and labor intensive, but available nondestructive techniques are applicable only to small scale studies or are strongly limited by soil conditions and root size. Soil electrical resistivity measured by geoelectrical methods has the potential to detect belowground plant structures, but quantitative relationships of these measurements with root traits have not been assessed. We tested the ability of two-dimensional (2-D) DC resistivity tomography to detect the spatial variability of roots and to quantify their biomass in a tree stand. A high-resolution resistivity tomogram was generated along a 11.75 m transect under an Alnus glutinosa (L.) Gaertn. stand based on an alpha-Wenner configuration with 48 electrodes spaced 0.25 m apart. Data were processed by a 2-D finite-element inversion algorithm, and corrected for soil temperature. Data acquisition, inversion and imaging were completed in the field within 60 min. Root dry mass per unit soil volume (root mass density, RMD) was measured destructively on soil samples collected to a depth of 1.05 m. Soil sand, silt, clay and organic matter contents, electrical conductivity, water content and pH were measured on a subset of samples. The spatial pattern of soil resistivity closely matched the spatial distribution of RMD. Multiple linear regression showed that only RMD and soil water content were related to soil resistivity along the transect. Regression analysis of RMD against soil resistivity revealed a highly significant logistic relationship (n = 97), which was confirmed on a separate dataset (n = 67), showing that soil resistivity was quantitatively related to belowground tree root biomass. This relationship provides a basis for developing quick nondestructive methods for detecting root distribution and quantifying root biomass, as well as for optimizing sampling strategies for studying root-driven phenomena.

The Economics of Root Distributions of Terrestrial Biomes in Response to Elevated CO2

Science.gov (United States)

Lu, M.; Hedin, L. O. O.

2017-12-01

Belowground root distributions of terrestrial biomes are central to understanding soil biogeochemical processes and land carbon sink. Yet models are thus far not able to predict root distributions across plant functional groups and major biomes, limiting our ability to predict the response of land systems to elevated CO2 concentration. Of particular concern is the apparent lack of stimulation of the aboveground carbon sink despite 30% increase of atmospheric CO2 over the past half-century, and despite the clear acceleration of the land carbon sink over the same period. This apparent discrepancy in land ecosystem response has led to the proposition that changes in belowground root dynamics might be responsible for the overlooked land sink. We here present a new modeling approach for predicting the response of root biomass and soil carbon storage to increased CO2. Our approach considers the first-principle mechanisms and tradeoffs by which plants and plant roots invest carbon to gain belowground resources, in collaboration with distinct root symbioses. We allow plants to locally compete for nutrients, with the ability to allocate biomass at different depths in the soil profile. We parameterized our model using an unprecedented global dataset of root traits, and validated our biome-level predictions with a recently updated global root biomass database. Our results support the idea that plants "dig deeper" when exposed to increased CO2, and we offer an economic-based mechanism for predicting the plant root response across soil conditions, plant functional groups and major biomes. Our model also recreates the observed responses across a range of free-air CO2 enrichment experiments, including a distinct response between plants associated with ectomycorrhizal and arbuscular mycorrhizal fungi. Most broadly, our findings suggest that roots may be increasingly important in the land carbon sink, and call for a greater effort to quantify belowground responses to elevated

Vegetation in karst terrain of southwestern China allocates more biomass to roots

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Ni, J.; Luo, D. H.; Xia, J.; Zhang, Z. H.; Hu, G.

2015-07-01

In mountainous areas of southwestern China, especially Guizhou province, continuous, broadly distributed karst landscapes with harsh and fragile habitats often lead to land degradation. Research indicates that vegetation located in karst terrains has low aboveground biomass and land degradation that reduces vegetation biomass, but belowground biomass measurements are rarely reported. Using the soil pit method, we investigated the root biomass of karst vegetation in five land cover types: grassland, grass-scrub tussock, thorn-scrub shrubland, scrub-tree forest, and mixed evergreen and deciduous forest in Maolan, southern Guizhou province, growing in two different soil-rich and rock-dominated habitats. The results show that roots in karst vegetation, especially the coarse roots, and roots in rocky habitats are mostly distributed in the topsoil layers (89 % on the surface up to 20 cm depth). The total root biomass in all habitats of all vegetation degradation periods is 18.77 Mg ha-1, in which roots in rocky habitat have higher biomass than in earthy habitat, and coarse root biomass is larger than medium and fine root biomass. The root biomass of mixed evergreen and deciduous forest in karst habitat (35.83 Mg ha-1) is not greater than that of most typical, non-karst evergreen broad-leaved forests in subtropical regions of China, but the ratio of root to aboveground biomass in karst forest (0.37) is significantly greater than the mean ratio (0.26 ± 0.07) of subtropical evergreen forests. Vegetation restoration in degraded karst terrain will significantly increase the belowground carbon stock, forming a potential regional carbon sink.

Comparison of vertical distribution of live and dead fine root biomass in six types of Cuban forests

Czech Academy of Sciences Publication Activity Database

Fiala, K.; Hernandéz, L.; Holub, Petr

2017-01-01

Roč. 29, č. 3 (2017), s. 275-281 ISSN 0128-1283 R&D Projects: GA MZe QJ1220007; GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:86652079 Keywords : Evergreen forests * mangroves * root dry mass * semi-deciduous forests * soil depth Subject RIV: GK - Forestry OBOR OECD: Forestry Impact factor: 0.466, year: 2016

Translocation of 14C in adventitiously rooting Calluna vulgaris on peat

International Nuclear Information System (INIS)

Wallen, B.

1983-01-01

Seasonal variation in translocation of 14 C-labelled assimilates showed that 14 C-translocation within woody tissue was mainly limited to the phytomass produced during the last eight years. Independent of overgrowth of basal stem segments or decumbent sections by Sphagnum, or of subsequent adventitious rooting, the allocation followed a negative exponential from the assimilating units down the plant, and reached negligible values in 8-yr-old wood. Translocation to fine roots was however, mainly restricted to the shallow roots. Already at ca. 10 cm depth, the fine roots contained only about 5% of the concentration in the fine roots in the surface. During spring and autumn translocation to below ground parts dominated. During summer the main translocation was within the above ground green shoots and flowers. Here most of the allocated 14 C was irreversibly bound. There were only weak indications of accumulation of moblie 14 C-compounds in the woody parts near the soil surface. (author)

Root anatomy, morphology, and longevity among root orders in Vaccinium corymbosum (Ericaceae).

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Valenzuela-Estrada, Luis R; Vera-Caraballo, Vivianette; Ruth, Leah E; Eissenstat, David M

2008-12-01

Understanding root processes at the whole-plant or ecosystem scales requires an accounting of the range of functions within a root system. Studying root traits based on their branching order can be a powerful approach to understanding this complex system. The current study examined the highly branched root system of the ericoid plant, Vaccinium corymbosum L. (highbush blueberry) by classifying its root orders with a modified version of the morphometric approach similar to that used in hydrology for stream classification. Root anatomy provided valuable insight into variation in root function across orders. The more permanent portion of the root system occurred in 4th- and higher-order roots. Roots in these orders had radial growth; the lowest specific root length, N:C ratios, and mycorrhizal colonization; the highest tissue density and vessel number; and the coarsest root diameter. The ephemeral portion of the root system was mainly in the first three root orders. First- and 2nd-order roots were nearly anatomically identical, with similar mycorrhizal colonization and diameter, and also, despite being extremely fine, median lifespans were not very short (115-120 d; estimated with minirhizotrons). Our research underscores the value of examining root traits by root order and its implications to understanding belowground processes.

Habitat Preferences, Distribution Pattern, and Root Weight Estimation of Pasak Bumi (Eurycoma longifolia Jack.

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Siti Masitoh Kartikawati

2014-04-01

Full Text Available Pasak bumi (Eurycoma longifolia Jack is one of non timber forest products with “indeterminate” conservation status and commercially traded in West Kalimantan. The research objective was to determine the potential of pasak bumi root per hectare and its ecological condition under natural habitat. Root weight of E. longifolia Jack was estimated using simple linear regression and exponential equation with stem diameter and height as independent variables. The results showed that the individual number of the population was 114 with the majority in seedling stage with 71 individuals (62.28%. The distribution was found in clumped pattern. Conditions of the habitat could be described as follows: daily average temperature of 25.6oC, daily average relative humidity of 73.6%, light intensity of 0.9 klx, and red-yellow podsolic soil with texture ranged from clay to sandy clay. The selected estimator model for E. longifolia Jack root weight used exponential equation with stem height as independent variable using the equation of Y= 21.99T0,010 and determination coefficient of 0.97. After height variable was added, the potential of E. longifolia Jack minimum root weight that could be harvested per hectare was 0.33 kg.Keywords: Eurycoma longifolia, habitat preference, distribution pattern, root weight

Root distribution pattern of triticale varieties under irrigated and unirrigated conditions using 32P plant injection technique

International Nuclear Information System (INIS)

Mahajan, J.P.; Soni, B.K.; Bhargava, B.S.

1977-01-01

A study on the root distribution pattern of four triticale varieties (6TA-204-3, 6TA-204-4, S-520 and S-411) under irrigated and unirrigated conditions showed that in general, there was a more profused root system in irrigated conditions than in the unirrigated ones. The lateral root distribution was adversely affected under unirrigated conditions. Root density of different varieties, in a soil segment of 15 cm diameter and 48 cm depth grown under unirrigated conditions, was in the following order : S-520 > 6 TA-204-3 > 6 TA-204-4 > S-411 while under irrigated conditions the order was : 6 TA-204-3 > S-520 > 6 TA-204-4 > S-411. (author)

Relationships between root respiration rate and root morphology, chemistry and anatomy in Larix gmelinii and Fraxinus mandshurica.

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Jia, Shuxia; McLaughlin, Neil B; Gu, Jiacun; Li, Xingpeng; Wang, Zhengquan

2013-06-01

Tree roots are highly heterogeneous in form and function. Previous studies revealed that fine root respiration was related to root morphology, tissue nitrogen (N) concentration and temperature, and varied with both soil depth and season. The underlying mechanisms governing the relationship between root respiration and root morphology, chemistry and anatomy along the root branch order have not been addressed. Here, we examined these relationships of the first- to fifth-order roots for near surface roots (0-10 cm) of 22-year-old larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) plantations. Root respiration rate at 18 °C was measured by gas phase O2 electrodes across the first five branching order roots (the distal roots numbered as first order) at three times of the year. Root parameters of root diameter, specific root length (SRL), tissue N concentration, total non-structural carbohydrates (starch and soluble sugar) concentration (TNC), cortical thickness and stele diameter were also measured concurrently. With increasing root order, root diameter, TNC and the ratio of root TNC to tissue N concentration increased, while the SRL, tissue N concentration and cortical proportion decreased. Root respiration rate also monotonically decreased with increasing root order in both species. Cortical tissue (including exodermis, cortical parenchyma and endodermis) was present in the first three order roots, and cross sections of the cortex for the first-order root accounted for 68% (larch) and 86% (ash) of the total cross section of the root. Root respiration was closely related to root traits such as diameter, SRL, tissue N concentration, root TNC : tissue N ratio and stele-to-root diameter proportion among the first five orders, which explained up to 81-94% of variation in the rate of root respiration for larch and up to 83-93% for ash. These results suggest that the systematic variations of root respiration rate within tree fine root system are possibly due to the

Characteristic of root decomposition in a tropical rainforest in Sarawak, Malaysi

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Ohashi, Mizue; Makita, Naoki; Katayam, Ayumi; Kume, Tomonori; Matsumoto, Kazuho; Khoon Kho, L.

2016-04-01

Woody roots play a significant role in forest carbon cycling, as up to 60 percent of tree photosynthetic production can be allocated to belowground. Root decay is one of the main processes of soil C dynamics and potentially relates to soil C sequestration. However, much less attention has been paid for root litter decomposition compared to the studies of leaf litter because roots are hidden from view. Previous studies have revealed that physico-chemical quality of roots, climate, and soil organisms affect root decomposition significantly. However, patterns and mechanisms of root decomposition are still poorly understood because of the high variability of root properties, field environment and potential decomposers. For example, root size would be a factor controlling decomposition rates, but general understanding of the difference between coarse and fine root decompositions is still lacking. Also, it is known that root decomposition is performed by soil animals, fungi and bacteria, but their relative importance is poorly understood. In this study, therefore, we aimed to characterize the root decomposition in a tropical rainforest in Sarawak, Malaysia, and clarify the impact of soil living organisms and root sizes on root litter decomposition. We buried soil cores with fine and coarse root litter bags in soil in Lambir Hills National Park. Three different types of soil cores that are covered by 1.5 cm plastic mesh, root-impermeable sheet (50um) and fungi-impermeable sheet (1um) were prepared. The soil cores were buried in February 2013 and collected 4 times, 134 days, 226 days, 786 days and 1151 days after the installation. We found that nearly 80 percent of the coarse root litter was decomposed after two years, whereas only 60 percent of the fine root litter was decomposed. Our results also showed significantly different ratio of decomposition between different cores, suggesting the different contribution of soil living organisms to decomposition process.

Modeling and analysis of the vertical roots distribution in levees - a case study of the third Rhone correction

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Gianetta, Ivan; Schwarz, Massimiliano; Glenz, Christian; Lammeranner, Walter

2013-04-01

In recent years the effects of roots on river banks and levees have been the subject of major discussions. The main issue about the presence of woody vegetation on levees is related to the possibility that roots increase internal erosion processes and the superimposed load of large trees compromise the integrity of these structures. However, ecologists and landscape managers argue that eliminating the natural vegetation from the riverbanks also means eliminating biotopes, strengthening anthropisation of the landscape, as well as limiting recreations areas. In the context of the third correction of the Rhone in Switzerland, the discussion on new levee geometries and the implementation of woody vegetation on them, lead to a detailed analysis of this issue for this specific case. The objective of this study was to describe quantitatively the processes and factors that influence the root distribution on levees and test modeling approaches for the simulation of vertical root distribution with laboratory and field data. An extension of an eco-hydrological analytic model that considers climatic and pedological condition for the quantification of vertical root distribution was validated with data provided by the University of Vienna (BOKU) of willows' roots (Salix purpurea) grown under controlled conditions. Furthermore, root distribution data of four transversal sections of a levee near Visp (canton Wallis, Switzerland) was used to validate the model. The positions of the levee's sections were chosen based on the species and dimensions of the woody vegetation. The dominant species present in the sections were birch (Betula pendula) and poplar (Populus nigra). For each section a grid of 50x50 cm was created to count and measure the roots. The results show that vertical distribution of root density under controlled growing conditions has an exponential form, decreasing with increasing soil depth, and can be well described by the eco-hydrological model. Vice versa, field

Long-term effects of deep soil loosening on root distribution and soil physical parameters in compacted lignite mine soils

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Badorreck, Annika; Krümmelbein, Julia; Raab, Thomas

2015-04-01

Soil compaction is a major problem of soils on dumped mining substrates in Lusatia, Germany. Deep ripping and cultivation of deep rooting plant species are considered to be effective ways of agricultural recultivation. Six years after experiment start, we studied the effect of initial deep soil loosening (i.e. down to 65 cm) on root systems of rye (Secale cereale) and alfalfa (Medicago sativa) and on soil physical parameters. We conducted a soil monolith sampling for each treatment (deep loosened and unloosened) and for each plant species (in three replicates, respectively) to determine root diameter, length density and dry mass as well as soil bulk density. Further soil physical analysis comprised water retention, hydraulic conductivity and texture in three depths. The results showed different reactions of the root systems of rye and alfalfa six years after deep ripping. In the loosened soil the root biomass of the rye was lower in depths of 20-40 cm and the root biomass of alfalfa was also decreased in depths of 20-50 cm together with a lower root diameter for both plant species. Moreover, total and fine root length density was higher for alfalfa and vice versa for rye. The soil physical parameters such as bulk density showed fewer differences, despite a higher bulk density in 30-40cm for the deep loosened rye plot which indicates a more pronounced plough pan.

Fruit yield and root system distribution of 'Tommy Atkins' mango under different irrigation regimes

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Marcelo R. dos Santos

2014-04-01

Full Text Available This study aimed to evaluate the fruit yield and the distribution of 'Tommy Atkins' mango root system under different irrigation regimes in the semiarid region of Bahia. The experimental design was completely randomized with five treatments and three replicates: 1 - Irrigation supplying 100% of ETc in phases I, II and III; 2 - Regulated deficit irrigation (RDI supplying 50% of ETc in phase I (beginning of flowering to early fruit growth; 3 - RDI supplying 50% ETc in phase II (start of expansion until the beginning of physiological maturity; 4 - RDI supplying 50% ETc in phase III (physiological mature fruits; 5 - No irrigation during all three phases. The regulated deficit irrigation supplying 50% of the ETc during phase I and II provided larger root length density of 'Tommy Atkins' mango. Regardless of management strategy, the roots were developed in all evaluated soil volume and the highest density is concentrated from 0.50 to 1.50 m distance from the trunk and in 0.20 to 0.90 m depth in the soil, that suggests this region to be the best place for fertilizer application as well for soil water sensor placement. The application of RDI during fruit set does not influence either root distribution or production. Root system and crop production is significantly reduced under no irrigation conditions.

Root Disease, Longleaf Pine Mortality, and Prescribed Burning

Energy Technology Data Exchange (ETDEWEB)

Otrosina, W.J; C.H. Walkinshaw; S.J. Zarnoch; S-J. Sung; B.T. Sullivan

2001-01-01

Study to determine factors involved in decline of longleaf pine associated with prescribed burning. Trees having symptoms were recorded by crown rating system based upon symptom severity-corresponded to tree physiological status-increased in hot burn plots. Root pathogenic fungi widespread throughout the study site. Histological studies show high fine root mortality rate in the hot burn treatment. Decline syndrome is complexed by root pathogens, soil factors, root damage and dysfunction.

Influence of temperature and soil drying on respiration of individual roots in citrus: integrating greenhouse observations into a predictive model for the field

NARCIS (Netherlands)

Bryla, D.R.; Bouma, T.J.; Hartmond, U.; Eissenstat, D.M.

2001-01-01

In citrus, the majority of fine roots are distributed near the soil surface - a region where conditions are frequently dry and temperatures fluctuate considerably. To develop a better understanding of the relationship between changes in soil conditions and a plant's below-ground respiratory costs,

Iron and ferritin dependent ROS distribution impact Arabidopsis root system architecture.

Science.gov (United States)

Reyt, Guilhem; Boudouf, Soukaina; Boucherez, Jossia; Gaymard, Frédéric; Briat, Jean-Franois

2014-11-09

Iron (Fe) homeostasis is integrated with the production of Reactive Oxygen Species (ROS) whose distribution at the root tip participates in the control of root growth. Excess Fe increases ferritin abundance, enabling the storage of Fe which contributes to protection of plants against Fe-induced oxidative stress. AtFer1 and AtFer3 are the two ferritin genes expressed in the meristematic zone, pericycle and endodermis of the Arabidopsis thaliana (Arabidopsis) root, and it is in these regions that we observe Fe stained dots. This staining disappears in the triple fer1-3-4 ferritin mutant. Fe excess decreases primary root length in the same way in wild-type and in fer1-3-4 mutant. In contrast, the Fe mediated decrease of lateral root (LR) length and density is enhanced in fer1-3-4 plants due to a defect in LR emergence. We observe that this interaction between excess Fe, ferritin and RSA is in part mediated by the H 2 O 2 /O 2 .- balance between the root cell proliferation and differentiation zones regulated by the UPB1 transcription factor. Further, meristem size is also decreased in response to Fe excess in ferritin mutant plants, implicating cell cycle arrest mediated by the ROS-activated SMR5/SMR7 cyclin-dependent kinase inhibitors pathway in the interaction between Fe and RSA. © The Author 2014. Published by the Molecular Plant Shanghai Editorial Office in association with Oxford University Press on behalf of CSPB and IPPE, SIBS, CAS.

Root induced changes of effective 1D hydraulic properties in a soil column.

Science.gov (United States)

Scholl, P; Leitner, D; Kammerer, G; Loiskandl, W; Kaul, H-P; Bodner, G

Roots are essential drivers of soil structure and pore formation. This study aimed at quantifying root induced changes of the pore size distribution (PSD). The focus was on the extent of clogging vs. formation of pores during active root growth. Parameters of Kosugi's lognormal PSD model were determined by inverse estimation in a column experiment with two cover crops (mustard, rye) and an unplanted control. Pore dynamics were described using a convection-dispersion like pore evolution model. Rooted treatments showed a wider range of pore radii with increasing volumes of large macropores >500 μm and micropores <2.5 μm, while fine macropores, mesopores and larger micropores decreased. The non-rooted control showed narrowing of the PSD and reduced porosity over all radius classes. The pore evolution model accurately described root induced changes, while structure degradation in the non-rooted control was not captured properly. Our study demonstrated significant short term root effects with heterogenization of the pore system as dominant process of root induced structure formation. Pore clogging is suggested as a partial cause for reduced pore volume. The important change in micro- and large macropores however indicates that multiple mechanic and biochemical processes are involved in root-pore interactions.

Communication complexity of distributed computing and a parallel algorithm for polynomial roots

International Nuclear Information System (INIS)

Tiwari, P.

1986-01-01

The first part of this thesis begins with a discussion of the minimum communication requirements in some distributed networks. The main result is a general technique for determining lower bounds on the communication complexity of problems on various distributed computer networks. This general technique is derived by simulating the general network by a linear array and then using a lower bound on the communication complexity of the problem on the linear array. Applications of this technique yield nontrivial optimal or near-optimal lower bounds on the communication complexity of distinctness, ranking, uniqueness, merging, and triangle detection on a ring, a mesh, and a complete binary tree of processors. A technique similar to the one used in proving the above results, yields interesting graph theoretic results concerning decomposition of a graph into complete bipartite subgraphs. The second part of the this is devoted to the design of a fast parallel algorithm for determining all roots of a polynomial. Given a polynomial rho(z) of degree n with m bit integer coefficients and an integer μ, the author considers the problem of determining all its roots with error less than 2/sup -μ/. It is shown that this problem is in the class NC if rho(z) has all real roots

Fine-Scale Spatial Heterogeneity in the Distribution of Waterborne Protozoa in a Drinking Water Reservoir.

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Burnet, Jean-Baptiste; Ogorzaly, Leslie; Penny, Christian; Cauchie, Henry-Michel

2015-09-23

The occurrence of faecal pathogens in drinking water resources constitutes a threat to the supply of safe drinking water, even in industrialized nations. To efficiently assess and monitor the risk posed by these pathogens, sampling deserves careful design, based on preliminary knowledge on their distribution dynamics in water. For the protozoan pathogens Cryptosporidium and Giardia, only little is known about their spatial distribution within drinking water supplies, especially at fine scale. Two-dimensional distribution maps were generated by sampling cross-sections at meter resolution in two different zones of a drinking water reservoir. Samples were analysed for protozoan pathogens as well as for E. coli, turbidity and physico-chemical parameters. Parasites displayed heterogeneous distribution patterns, as reflected by significant (oo)cyst density gradients along reservoir depth. Spatial correlations between parasites and E. coli were observed near the reservoir inlet but were absent in the downstream lacustrine zone. Measurements of surface and subsurface flow velocities suggest a role of local hydrodynamics on these spatial patterns. This fine-scale spatial study emphasizes the importance of sampling design (site, depth and position on the reservoir) for the acquisition of representative parasite data and for optimization of microbial risk assessment and monitoring. Such spatial information should prove useful to the modelling of pathogen transport dynamics in drinking water supplies.

Spatial distribution of grape root borer (Lepidoptera: Sesiidae) infestations in Virginia vineyards and implications for sampling.

Science.gov (United States)

Rijal, J P; Brewster, C C; Bergh, J C

2014-06-01

Grape root borer, Vitacea polistiformis (Harris) (Lepidoptera: Sesiidae) is a potentially destructive pest of grape vines, Vitis spp. in the eastern United States. After feeding on grape roots for ≍2 yr in Virginia, larvae pupate beneath the soil surface around the vine base. Adults emerge during July and August, leaving empty pupal exuviae on or protruding from the soil. Weekly collections of pupal exuviae from an ≍1-m-diameter weed-free zone around the base of a grid of sample vines in Virginia vineyards were conducted in July and August, 2008-2012, and their distribution was characterized using both nonspatial (dispersion) and spatial techniques. Taylor's power law showed a significant aggregation of pupal exuviae, based on data from 19 vineyard blocks. Combined use of geostatistical and Spatial Analysis by Distance IndicEs methods indicated evidence of an aggregated pupal exuviae distribution pattern in seven of the nine blocks used for those analyses. Grape root borer pupal exuviae exhibited spatial dependency within a mean distance of 8.8 m, based on the range values of best-fitted variograms. Interpolated and clustering index-based infestation distribution maps were developed to show the spatial pattern of the insect within the vineyard blocks. The temporal distribution of pupal exuviae showed that the majority of moths emerged during the 3-wk period spanning the third week of July and the first week of August. The spatial distribution of grape root borer pupal exuviae was used in combination with temporal moth emergence patterns to develop a quantitative and efficient sampling scheme to assess infestations.

Quantitative imaging of radial oxygen loss from Valisneria spiralis roots with a fluorescent planar optode

International Nuclear Information System (INIS)

Han, Chao; Ren, Jinghua; Tang, Hao; Xu, Di; Xie, Xianchuan

2016-01-01

Oxygen (O_2) availability within the sediment–root interface is critical to the survival of macrophytes in O_2-deficient sediment; however, our knowledge of the fine-scale impact of macrophyte roots upon the spatiotemporal dynamics of O_2 is relatively limited. In this study, a non-invasive imaging technology was utilized to map O_2 micro-distribution around Vallisneria spiralis. Long-term imaging results gathered during a 36 day-period revealed an abundance of O_2 spatiotemporal patterns ranging from 0 to 250 μmol L"− "1. The root-induced O_2 leakage and consequent oxygenated area were stronger in the vicinity of the basal root compared to that found in the root tip. The O_2 images revealed V. spiralis exhibited radial O_2 loss (ROL) along the entire root, and the O_2 distribution along the root length showed a high degree of small-scale spatial heterogeneity decreasing from 80% at the basal root surface to 10% at the root tip. The oxygenated zone area around the roots increased as O_2 levels increased with root growth and irradiance intensities ranging from 0 to 216 μmol photons m"− "2 s"− "1. A weak ROL measuring < 20% air saturation around the basal root surface was maintained in darkness, which was presumably attributed to the O_2 supply from overlying water via plant aerenchyma. The estimated total O_2 release to the rhizosphere of V. spiralis was determined to range from 8.80 ± 7.32 to 30.34 ± 17.71 nmol m"− "2 s"− "1, which is much higher than many other macrophyte species. This O_2 release may be an important contribution to the high-capacity of V. spiralis for quickly colonizing anaerobic sediment. - Highlights: • Planar imaging method was used to map O2 micro-distribution. • Highly dynamic rhizospheric O2-spatiotemporal distribution was observed. • O_2 leakage along the entire root of Vallisneria spirals were defined. • The ROL rates of 8.80–30.34 nmol m"− "2 s"− "1 were measured over a 36-day growth. • ROL was closely

Distribution of the root system of peach palm under drip irrigation

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Adriano da Silva Lopes

2014-07-01

Full Text Available The incorporation of technologies has resulted in increased productivity and the more rational management of peach palm, with irrigation being an important tool for certain regions. Thus, studies leading to proper crop management are extremely important, such as the estimate of the effective depth of the root system, which is indispensable for proper irrigation management. The objective of this study was to evaluate the effects of different irrigation depths, as applied by drip irrigation, on the distribution of the root system of peach palm. This experiment was conducted in Ilha Solteira, São Paulo State, Brazil, with drip irrigation, with the two systems (flow of 0.0023 m3 h-1 consisting of four irrigation treatments corresponding to 0, 50, 100 and 150% of Class ‘A’ pan evaporation. After five years, an analysis of the Bactris gasipaes root system was performed at a distance of 0.0, 0.5 and 1.0 meters from the trunk, collecting sampling at two depths (0.0 to 0.3 m and 0.3 to 0.6 m via the auger method (volumetric analysis. We concluded that the effective depth of the root system used for irrigation management should be a maximum of 0.3 meters.

The Effect of Resection Angle on Stress Distribution after Root-End Surgery

Science.gov (United States)

Monteiro, Jaiane Bandoli; Dal Piva, Amanda Maria de Oliveira; Tribst, João Paulo Mendes; Borges, Alexandre Luiz Souto; Tango, Rubens Nisie

2018-01-01

Introduction: This study aimed to investigate the influence of the resection angle on the stress distribution of retrograde endodontic treated maxillary incisors under oblique-load application. Methods and Materials: A maxillary central incisor which was endodontically treated and restored with a fiber glass post was obtained in a 3-dimensional numerical model and distributed into three groups according to type of resection: control; restored with fiber post without retrograde obturation, R45 and R90 with 45º and 90º resection from tooth axial axis, respectively and restored with Fuji II LC (GC America). The numerical models received a 45º occlusal load of 200 N/cm2 on the middle of lingual surface. All materials and structures were considered linear elastic, homogeneous and isotropic. Numerical models were plotted and meshed with isoparametric elements, and the results were analyzed using maximum principal stress (MPS). Results: MPS showed greater stress values in the bone tissue for control group than the other groups. Groups with apicectomy showed acceptable stress distribution on the fiber post, cement layer and root dentin, presenting more improved values than control group. Conclusion: Apicectomy at 90º promotes more homogeneity on stress distribution on the fiber post, cement layer and root dentin, which suggests less probability of failure. However, due to its facility and stress distribution also being better than control group, apicectomy at 45° could be a good choice for clinicians. PMID:29707013

Root desiccation and drought stress responses of bareroot Quercus rubra seedlings treated with a hydrophilic polymer root dip

Science.gov (United States)

Kent G. Apostol; Douglass F. Jacobs; R. Kasten Dumroese

2009-01-01

Root hydrogel, a hydrophilic polymer, has been used to improve transplanting success of bareroot conifer seedlings through effects on water holding capacity. We examined mechanisms by which Terra-sorb Fine Hydrogel reduces damage that occurs when roots of 1-year old, dormant northern red oak (Quercus rubra L.) were subjected to shortterm (1, 3, and 5...

Fine-grained sediment spatial distribution on the basis of a geostatistical analysis: Example of the eastern Bay of the Seine (France)

Science.gov (United States)

Méar, Y.; Poizot, E.; Murat, A.; Lesueur, P.; Thomas, M.

2006-12-01

The eastern Bay of the Seine (English Channel) was the subject in 1991 of a sampling survey of superficial sediments. Geostatistic tools were used to examine the complexity of the spatial distribution of the fine-grained fraction (discussed. Within this sedimentary unit, the distribution of the fine fraction is very heterogeneous, with mud patches of less than 4000 m diameter; the boundary between these mud patches and their substratum is very sharp. The distribution of this fine fraction appears to be controlled by an anticyclonic eddy located off the Pays de Caux. Under the influence of this, the suspended material expelled from the Seine estuary moves along the coast and swings off Antifer harbour, towards the NW. It is trapped within this eddy because of the settling of suspended particulate matter. Both at a general scale and a local scale the morphology (whether inherited or due to modern processes) has a strong influence on the spatial distribution of the fine fraction. At the general scale, the basin-like shape of the area facilitates the silting, and the presence of the submarine dunes, called "Ridins d'Antifer", clearly determines the northern limit of the muddy zone. At a local scale, the same influence is obvious: paleovalleys trap the fine sediments, whereas isolated sand dunes and ripples limit the silting. This duality of role of the morphology is therefore one of the reasons why the muddy surface is extremely heterogeneous spatially. The presence of an important population of suspension feeding echinoderm, the brittle-star Ophiothrix fragilis Abildgaard, has led to a local increase in the silting, and to the modification of the physicochemical and sedimentological parameters. A complex relationship is shown to occur between the amount of fine fraction and the number of brittle-stars (ind. m -2). Classical statistical methods are not appropriate to study the spatial distribution of the mud fraction, because the spatial component of the percentage of

Root traits contributing to plant productivity under drought

Directory of Open Access Journals (Sweden)

Louise eComas

2013-11-01

Full Text Available Geneticists and breeders are positioned to breed plants with root traits that improve productivity under drought. However, a better understanding of root functional traits and how traits are related to whole plant strategies to increase crop productivity under different drought conditions is needed. Root traits associated with maintaining plant productivity under drought include small fine root diameters, long specific root length (SRL, and considerable root length density, especially at depths in soil with available water. In environments with late season water deficits, small xylem diameters in targeted seminal roots save soil water deep in the soil profile for use during crop maturation and result in improved yields. Capacity for deep root growth and large xylem diameters in deep roots may also improve root acquisition of water when ample water at depth is available. Xylem pit anatomy that makes xylem less ‘leaky’ and prone to cavitation warrants further exploration holding promise that such traits may improve plant productivity in water-limited environments without negatively impacting yield under adequate water conditions. Rapid resumption of root growth following soil rewetting may improve plant productivity under episodic drought. Genetic control of many of these traits through breeding appears feasible. Several recent reviews have covered methods for screening root traits but an appreciation for the complexity of root systems (e.g. functional differences between fine and coarse roots needs to be paired with these methods to successfully identify relevant traits for crop improvement. Screening of root traits at early stages in plant development can proxy traits at mature stages but verification is needed on a case by case basis that traits are linked to increased crop productivity under drought. Examples in lesquerella (Physaria and rice (Oryza show approaches to phenotyping of root traits and current understanding of root trait

[Correlation of fine structures of distributions of amplitudes of a photomultiplier dark current fluctuations with the Earth rotations about its axis].

Science.gov (United States)

Fedorov, M V; Belousov, L V; Voeĭkov, V L; Zenchenko, K I; Zenchenko, T A; Konradov, A A; Shnol', S E

2001-01-01

The fine structures of distributions of photomultiplier dark current fluctuations measured in two laboratories 2000 km distant from other: in the international Institute of Biophysics (Neuss, Germany) and in the Moscow State University (Moscow, Russia) were compared. It is shown that similar forms of appropriate histograms are apparently more often realized at both locations at the same local time. This confirms the previous conclusion that the fine structure of distributions correlates with rotation of the Earth about its axis.

Visualization of physico-chemical properties and microbial distribution in soil and root microenvironments

Science.gov (United States)

Eickhorst, Thilo; Schmidt, Hannes

2016-04-01

Plant root development is influenced by soil properties and environmental factors. In turn plant roots can also change the physico-chemical conditions in soil resulting in gradients between roots and the root-free bulk soil. By releasing a variety of substances roots facilitate microbial activities in their direct vicinity, the rhizosphere. The related microorganisms are relevant for various ecosystem functions in the root-soil interface such as nutrient cycling. It is therefore important to study the impact and dynamics of microorganisms associated to different compartments in root-soil interfaces on a biologically meaningful micro-scale. The analysis of microorganisms in their habitats requires microscopic observations of the respective microenvironment. This can be obtained by preserving the complex soil structure including the root system by resin impregnation resulting in high quality thin sections. The observation of such sections via fluorescence microscopy, SEM-EDS, and Nano-SIMS will be highlighted in this presentation. In addition, we will discuss the combination of this methodological approach with other imaging techniques such as planar optodes or non-invasive 3D X-ray CT to reveal the entire spatial structure and arrangement of soil particles and roots. When combining the preservation of soil structure via resin impregnation with 16S rRNA targeted fluorescence in situ hybridization (FISH) single microbial cells can be visualized, localized, and quantified in the undisturbed soil matrix including the root-soil interfaces. The simultaneous use of multiple oligonucleotide probes thereby provides information on the spatial distribution of microorganisms belonging to different phylogenetic groups. Results will be shown for paddy soils, where management induced physico-chemical dynamics (flooding and drying) as well as resulting microbial dynamics were visualized via correlative microscopy in resin impregnated samples.

Interspecies Interactions in Relation to Root Distribution Across the Rooting Profile in Wheat-Maize Intercropping Under Different Plant Densities

Directory of Open Access Journals (Sweden)

Yifan Wang

2018-04-01

Full Text Available In wheat-maize intercropping systems, the maize is often disadvantageous over the wheat during the co-growth period. It is unknown whether the impaired growth of maize can be recovered through the enhancement of the belowground interspecies interactions. In this study, we (i determined the mechanism of the belowground interaction in relation to root growth and distribution under different maize plant densities, and (ii quantified the “recovery effect” of maize after wheat harvest. The three-year (2014–2016 field experiment was conducted at the Oasis Agriculture Research Station of Gansu Agricultural University, Wuwei, Northwest China. Root weight density (RWD, root length density (RLD, and root surface area density (RSAD, were measured in single-cropped maize (M, single-cropped wheat (W, and three intercropping systems (i wheat-maize intercropping with no root barrier (i.e., complete belowground interaction, IC, (ii nylon mesh root barrier (partial belowground interaction, IC-PRI, and (iii plastic sheet root barrier (no belowground interaction, IC-NRI. The intercropped maize was planted at low (45,000 plants ha−1 and high (52,000 plants ha−1 densities. During the wheat/maize co-growth period, the IC treatment increased the RWD, RLD, and RSAD of the intercropped wheat in the 20–100 cm soil depth compared to the IC-PRI and IC-NRI systems; intercropped maize had 53% lower RWD, 81% lower RLD, and 70% lower RSAD than single-cropped maize. After wheat harvest, the intercropped maize recovered the growth with the increase of RWD by 40%, RLD by 44% and RSAD by 11%, compared to the single-cropped maize. Comparisons among the three intercropping systems revealed that the “recovery effect” of the intercropped maize was attributable to complete belowground interspecies interaction by 143%, the compensational effect due to root overlap by 35%, and the compensational effect due to water and nutrient exchange (CWN by 80%. The higher maize plant

Carbon and nitrogen distribution in oak-hickory forests distributed along a productivity gradient

Energy Technology Data Exchange (ETDEWEB)

Reber, R.T.; Kaczmarek, D.J.; Pope, P.E.; Rodkey, K.S. [Purdue Univ., West Lafayette, IN (United States)

1993-12-31

Biomass, carbon and nitrogen pools were determined for oak-hickory forests of varying productivity. Little information of this type is available for the central hardwood region. Six oak-hickory dominated forests were chosen to represent a range in potential site productivity as influenced by soil type, amount of recyclable nutrients and available water. Biomass, carbon and nitrogen storage were determined for the following components: above ground standing biomass, fine root biomass, forest floor organic layers and litterfall. As site sequestered at each site was dependent more on the amount of living biomass at each site Litterfall, to some extent, increased with increasing site productivity. As potential site productivity decreased, total fine root biomass increased. The data suggest that as site quality decreased fine root production and turnover may become as important in nutrient cycling as annual litterfall.

Reaction of mycorrhizal and non-mycorrhizal Scots pine fine roots along a deposition gradient of air pollutants in eastern Germany

International Nuclear Information System (INIS)

Muenzenberger, B.; Schminke, B.; Strubelt, F.; Huettl, R.F.

1995-01-01

Based on an ecosystematic approach within the comprehensive SANA (regeneration of the atmosphere above the new federal states) project the influence of industrial air pollutants (SO 2 , NO x ) (alkaline fly ashes) on the vitality of mycorrhizal, mycorrhizal frequency, and on parameters of root growth such as root biomass and necromass and distribution of different root classes in the soil horizons was investigated. The studies were conducted in three comparable Scots pine ecosystems in eastern Germany which were exposed to different deposition loads of air pollutants during the time of the former German Democratic Republic. Site specific differences were obtained for all parameters investigated. The reference plot Neuglobsow (background deposition) revealed the highest number of vital mycorrhizal, highest mycorrhizal frequency, and largest biomass of finest roots in the humus layer. At the impact-site Roesa and Taura (heavy and moderate deposition) located near Halle/Bitterfeld and Leipzig, the number of vital mycorrhizae was reduced and the life-span of mycorrhizae of reduced vitality was elongated. Finest root biomass and necromass of the humus layer were also lower at these plots as compared to Neuglobsow. At Neuglobsow a higher turnover of mycorrhizae and finest roots of the humus layer is assumed. The reduced growth of mycorrhizal and non-mycorrhizal finest roots at the two pollution impacted sites Roesa and Taura is seen as an adaptation mechanism of the root system to high nutrient inputs. 14 refs., 4 figs

A Modelling Approach on Fine Particle Spatial Distribution for Street Canyons in Asian Residential Community

Science.gov (United States)

Ling, Hong; Lung, Shih-Chun Candice; Uhrner, Ulrich

2016-04-01

Rapidly increasing urban pollution poses severe health risks.Especially fine particles pollution is considered to be closely related to respiratory and cardiovascular disease. In this work, ambient fine particles are studied in street canyons of a typical Asian residential community using a computational fluid dynamics (CFD) dispersion modelling approach. The community is characterised by an artery road with a busy traffic flow of about 4000 light vehicles (mainly cars and motorcycles) per hour at rush hours, three streets with hundreds light vehicles per hour at rush hours and several small lanes with less traffic. The objective is to study the spatial distribution of the ambient fine particle concentrations within micro-environments, in order to assess fine particle exposure of the people living in the community. The GRAL modelling system is used to simulate and assess the emission and dispersion of the traffic-related fine particles within the community. Traffic emission factors and traffic situation is assigned using both field observation and local emissions inventory data. High resolution digital elevation data (DEM) and building height data are used to resolve the topographical features. Air quality monitoring and mobile monitoring within the community is used to validate the simulation results. By using this modelling approach, the dispersion of fine particles in street canyons is simulated; the impact of wind condition and street orientation are investigated; the contributions of car and motorcycle emissions are quantified respectively; the residents' exposure level of fine particles is assessed. The study is funded by "Taiwan Megacity Environmental Research (II)-chemistry and environmental impacts of boundary layer aerosols (Year 2-3) (103-2111-M-001-001-); Spatial variability and organic markers of aerosols (Year 3)(104-2111-M-001 -005 -)"

Light and decapitation effects on in vitro rooting in maize root segments.

Science.gov (United States)

Golaz, F W; Pilet, P E

1985-10-01

The effects of white light and decapitation on the initiation and subsequent emergence and elongation of lateral roots of apical maize (Zea mays L. cv LG 11) root segments have been examined. The formation of lateral root primordium was inhibited by the white light. This inhibition did not depend upon the presence of the primary root tip. However, root decapitation induced a shift of the site of appearance of the most apical primordium towards the root apex, and a strong disturbance of the distribution pattern of primordium volumes along the root axis. White light had a significant effect neither on the distribution pattern of primordium volumes, nor on the period of primordium development (time interval required for the smallest detectable primordia to grow out as secondary roots). Thus, considering the rooting initiation and emergence, the light effect was restricted to the initiation phase only. Moreover, white light reduced lateral root elongation as well as primary root growth.

Quantitative imaging of radial oxygen loss from Valisneria spiralis roots with a fluorescent planar optode

Energy Technology Data Exchange (ETDEWEB)

Han, Chao [State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008 (China); Ren, Jinghua [Geological Survey of Jiangsu Province, Nanjing 210018 (China); Tang, Hao [State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008 (China); Xu, Di, E-mail: dxu@niglas.ac.cn [State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008 (China); Xie, Xianchuan, E-mail: xchxie@nju.edu.cn [State Key Laboratory of Pollution Control and Resource Reuse, Center for Hydroscience Research, School of the Environment, Nanjing University, Nanjing 210093 (China)

2016-11-01

Oxygen (O{sub 2}) availability within the sediment–root interface is critical to the survival of macrophytes in O{sub 2}-deficient sediment; however, our knowledge of the fine-scale impact of macrophyte roots upon the spatiotemporal dynamics of O{sub 2} is relatively limited. In this study, a non-invasive imaging technology was utilized to map O{sub 2} micro-distribution around Vallisneria spiralis. Long-term imaging results gathered during a 36 day-period revealed an abundance of O{sub 2} spatiotemporal patterns ranging from 0 to 250 μmol L{sup −} {sup 1}. The root-induced O{sub 2} leakage and consequent oxygenated area were stronger in the vicinity of the basal root compared to that found in the root tip. The O{sub 2} images revealed V. spiralis exhibited radial O{sub 2} loss (ROL) along the entire root, and the O{sub 2} distribution along the root length showed a high degree of small-scale spatial heterogeneity decreasing from 80% at the basal root surface to 10% at the root tip. The oxygenated zone area around the roots increased as O{sub 2} levels increased with root growth and irradiance intensities ranging from 0 to 216 μmol photons m{sup −} {sup 2} s{sup −} {sup 1}. A weak ROL measuring < 20% air saturation around the basal root surface was maintained in darkness, which was presumably attributed to the O{sub 2} supply from overlying water via plant aerenchyma. The estimated total O{sub 2} release to the rhizosphere of V. spiralis was determined to range from 8.80 ± 7.32 to 30.34 ± 17.71 nmol m{sup −} {sup 2} s{sup −} {sup 1}, which is much higher than many other macrophyte species. This O{sub 2} release may be an important contribution to the high-capacity of V. spiralis for quickly colonizing anaerobic sediment. - Highlights: • Planar imaging method was used to map O2 micro-distribution. • Highly dynamic rhizospheric O2-spatiotemporal distribution was observed. • O{sub 2} leakage along the entire root of Vallisneria spirals were

Distribution of some pectic and arabinogalactan protein epitopes during Solanum lycopersicum (L.) adventitious root development.

Science.gov (United States)

Sala, Katarzyna; Malarz, Katarzyna; Barlow, Peter W; Kurczyńska, Ewa U

2017-01-25

The adventitious roots (AR) of plants share the same function as primary and lateral roots (LR), although their development is mainly an adaptive reaction to stress conditions. Regeneration of grafted plants is often accompanied by AR formation thus making the grafting technique a good model for studying AR initiation and development and their means of emergence. Pectins and arabinogalactan proteins (AGP) are helpful markers of particular cellular events, such as programmed cell death (PCD), elongation, proliferation or other differentiation events that accompany AR development. However, little is known about the distribution of pectins and AGPs during AR ontogeny, either in the primordium or stem tissues from which AR arise or their correspondence with these events during LR formation. AR were developed from different stem tissues such as parenchyma, xylem rays and the cambium, depending on the stem age and treatment (grafting versus cutting) of the parental tissue. Immunochemical analysis of the presence of pectic (LM8, LM19, LM20) and AGP (JIM8, JIM13, JIM16) epitopes in AR and AR-associated tissues showed differential, tissue-specific distributions of these epitopes. Two pectic epitopes (LM19, LM20) were developmentally regulated and the occurrence of the LM8 xylogalacturonan epitope in the root cap of the AR differed from other species described so far. AGP epitopes were abundantly present in the cytoplasmic compartments (mainly the tonoplast) and were correlated with the degree of cell vacuolisation. JIM8 and JIM13 epitopes were detected in the more advanced stages of primordium development, whereas the JIM16 epitope was present from the earliest division events of the initial AR cells. The comparison between AR and LR showed quantitative (AGP,) and qualitative (pectins) differences. The chemical compositions of adventitious and lateral root cells show differences that correlate with the different origins of these cells. In AR, developmental changes in the

Root layering in a tropical forest after logging (Central Vietnam

Directory of Open Access Journals (Sweden)

Zdeněk Čermák

2012-01-01

Full Text Available Indigenous stands of tropical rain forests in the region of Kon Ha Nung are one of the most preserved forests in the whole Vietnam. Despite the logging activities mainly in the 1970’s, it was possible to preserve intact forests free from any primary harvesting. In the past, other stands were influenced by the logging to various extent. Some of those stands are managed presently; others were left to natural development. This paper deals with the influence of harvesting activities on the root system in forest stands. In primary stands and in stands with known harvest intensity, samples of root systems were collected. The total weight of dry basis and mainly their layering within the soil profile were assessed. The collected roots were divided into three classes: class I – ≤ 1.0 mm, class II 1.1–5.0 mm, class III – over 5.0 mm in the diameter. In the monitored plots, the total weight of dry basis of fine roots to 1.0 mm ranged from 2.34–3.24 t∙ha−1. The weight of dry basis of roots from 1.0–5.0 mm ranged from 6.57–9.69 t∙ha−1. The majority of roots of class I is presented in the top 10.0 cm of the soil and their share drops with the increasing depth. The roots of class II are distributed more equally. It was impossible to prove the influence of the logging on the root system.

Can diversity in root architecture explain plant water use efficiency? A modeling study.

Science.gov (United States)

Tron, Stefania; Bodner, Gernot; Laio, Francesco; Ridolfi, Luca; Leitner, Daniel

2015-09-24

Drought stress is a dominant constraint to crop production. Breeding crops with adapted root systems for effective uptake of water represents a novel strategy to increase crop drought resistance. Due to complex interaction between root traits and high diversity of hydrological conditions, modeling provides important information for trait based selection. In this work we use a root architecture model combined with a soil-hydrological model to analyze whether there is a root system ideotype of general adaptation to drought or water uptake efficiency of root systems is a function of specific hydrological conditions. This was done by modeling transpiration of 48 root architectures in 16 drought scenarios with distinct soil textures, rainfall distributions, and initial soil moisture availability. We find that the efficiency in water uptake of root architecture is strictly dependent on the hydrological scenario. Even dense and deep root systems are not superior in water uptake under all hydrological scenarios. Our results demonstrate that mere architectural description is insufficient to find root systems of optimum functionality. We find that in environments with sufficient rainfall before the growing season, root depth represents the key trait for the exploration of stored water, especially in fine soils. Root density, instead, especially near the soil surface, becomes the most relevant trait for exploiting soil moisture when plant water supply is mainly provided by rainfall events during the root system development. We therefore concluded that trait based root breeding has to consider root systems with specific adaptation to the hydrology of the target environment.

Root Growth and Water distribution in living walls

DEFF Research Database (Denmark)

Jørgensen, Lars

of functional living walls and this thesis is a first step of understanding the essential but hidden part inside the growing medium, i.e. the roots. Ensuring successful performance of the plants in a living wall is complex and the choice of growing medium, plant species and planting position are important....... for root growth. This thesis investigates the correlations between the growing media and root and shoots growth, and studies root growth patterns of different plant species and effects of planting position and root interactions of plants growing in living walls. There are a number of challenges with living...... walls; the vertical orientation of the growing medium, plants are growing vertically above or below each other in a limited rooting volume; there is an increased exposure to weather and the plants can react differently to water conditions and competition from other plants. Plant growth is the core...

Estimating the absorptive root area in Norway spruce by using the common direct and indirect earth impedance methods

Czech Academy of Sciences Publication Activity Database

Čermák, J.; Cudlín, Pavel; Gebauer, R.; Borja, I.; Martinková, M.; Staněk, Z.; Koller, J.; Neruda, J.; Nadezhdina, N.

2013-01-01

Roč. 372, 1-2 (2013), s. 401-415 ISSN 0032-079X R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073; GA MŠk OC10023 Institutional support: RVO:67179843 Keywords : Active absorptive fine root area index * Fine root surface * Modified earth impedance * Picea abies * Root research methods Subject RIV: EH - Ecology, Behaviour Impact factor: 3.235, year: 2013

DENSITY AND DISTRIBUTION OF ENSET ROOT MEALYBUGS ON ...

African Journals Online (AJOL)

Administrator

insect pest of enset (Ensete ventricosum) in southern Ethiopia. ... An average of 87 adult enset root mealybugs were collected from roots and corms per plant. The ..... (IPM) control options on enset root mealybug population numbers or when screening large numbers of enset clones for their resistance against this insect.

Roots of pioneer trees in the lower sub-tropical area of Dinghushan, Guangdong, China

Institute of Scientific and Technical Information of China (English)

HAO Yan-ru; PENG Shao-lin; MO Jiang-ming; LIU Xin-wei; CHEN Zhuo-quan; ZHOU Kai; WU Jin-rong

2006-01-01

Representative pioneer tree root systems in the subtropical area of South China were examined with regard to their structure, underground stratification and biomass distribution. Excavation of skeleton roots and observation of fine roots of seven species including the Euphorbiaceae, Theaceae, Melastomataceae, Lauraceae and Fagaceae families was carried out. The results showed that: (1) Pioneer tree roots in the first stage of natural succession were of two types, one characterized by taproot system with bulky plagiotropic branches; the other characterized by flat root system with several tabular roots. The late mesophilous tree roots were characterized by one obvious taproot and tactic braches roots up and down. Shrub species roots were characterized by heart fibrous root type featured both by horizontally and transversally growing branches. Root shapes varied in different dominant species at different stages of succession. (2) Roots of the different species varied in the external features-color, periderm and structure of freshly cut slash. (3) In a set of successional stages the biomass of tree roots increased linearly with the age of growth. During monsoon, the total root biomass amounted to 115.70 t/ha in the evergreen broad-leaved forest; 50.61t/ha in needle and broad-leaved mixed forest dominated by coniferous forest; and 64.20 t/ha in broad-and needle-leaved mixed forest dominated by broad-leaved heliophytes, and are comparable to the underground biomass observed in similar tropical forests. Thisis the first report about roots characteristics of forest in the lower sub-tropical area of Dinghushan, Guangdong, China.

Iron- and ferritin-dependent reactive oxygen species distribution: impact on Arabidopsis root system architecture.

Science.gov (United States)

Reyt, Guilhem; Boudouf, Soukaina; Boucherez, Jossia; Gaymard, Frédéric; Briat, Jean-Francois

2015-03-01

Iron (Fe) homeostasis is integrated with the production of reactive oxygen species (ROS), and distribution at the root tip participates in the control of root growth. Excess Fe increases ferritin abundance, enabling the storage of Fe, which contributes to protection of plants against Fe-induced oxidative stress. AtFer1 and AtFer3 are the two ferritin genes expressed in the meristematic zone, pericycle and endodermis of the Arabidopsis thaliana root, and it is in these regions that we observe Fe stained dots. This staining disappears in the triple fer1-3-4 ferritin mutant. Fe excess decreases primary root length in the same way in wild-type and in fer1-3-4 mutant. In contrast, the Fe-mediated decrease of lateral root (LR) length and density is enhanced in fer1-3-4 plants due to a defect in LR emergence. We observe that this interaction between excess Fe, ferritin, and root system architecture (RSA) is in part mediated by the H2O2/O2·- balance between the root cell proliferation and differentiation zones regulated by the UPB1 transcription factor. Meristem size is also decreased in response to Fe excess in ferritin mutant plants, implicating cell cycle arrest mediated by the ROS-activated SMR5/SMR7 cyclin-dependent kinase inhibitors pathway in the interaction between Fe and RSA. Copyright © 2015 The Author. Published by Elsevier Inc. All rights reserved.

Fuel pin failure root causes and power distribution gradients in WWER cores

International Nuclear Information System (INIS)

Mikus, J.

2008-01-01

The purpose of this work is to investigate the influence of some core heterogeneities and reactor construction materials on space power distribution in WWER type cores, especially from viewpoint of the values and gradient occurrence that could result in static loads with some consequences, e.g., fuel pin (FP) or fuel assembly (FA) bowing and possible contribution to the FP failure root causes. Presented information were obtained by means of experiments on research reactor LR-0 concerning the: 1) Power distribution estimation on pellet surface of the FPs neighbouring a FP containing gadolinium (Gd 2 O 3 ) burnable absorber integrated into fuel in WWER-440 and -1000 type cores; 2) Power distribution measurement in periphery FAs neighbouring the baffle in WWER-1000 type cores and 3) Power distribution in FAs neighbouring the control rod absorbing part in a WWER-440 type core. (author)

Power distribution gradients in WWER type cores and fuel failure root causes

Energy Technology Data Exchange (ETDEWEB)

Mikuš, Ján M., E-mail: JanMikus.nrc@hotmail.com

2014-02-15

Highlights: • Power (fission rate) distribution gradients can represent fuel failure root causes. • Positions with above gradients were investigated in WWER type cores on reactor LR-0. • Above gradients were evaluated near core heterogeneities and construction materials. • Results can be used for code validation and fuel failure occurrence investigation. - Abstract: Neutron flux non-uniformity and gradients of neutron current resulting in corresponding power (fission rate) distribution changes can represent root causes of the fuel failure. Such situation can be expected in vicinity of some core heterogeneities and construction materials. Since needed data cannot be obtained from nuclear power plant (NPP), results of some benchmark type experiments performed on light water, zero-power research reactor LR-0 were used for investigation of the above phenomenon. Attention was focused on determination of the spatial power distribution changes in fuel assemblies (FAs): Containing fuel rods (FRs) with Gd burnable absorber in WWER-440 and WWER-1000 type cores, Neighboring the core blanket and dummy steel assembly simulators on the periphery of the WWER-440 standard and low leakage type cores, resp., Neighboring baffle in WWER-1000 type cores, and Neighboring control rod (CR) in WWER-440 type cores, namely (a) power peak in axial power distribution in periphery FRs of the adjacent FAs near the area between CR fuel part and butt joint to the CR absorbing part and (b) decrease in radial power distribution in FRs near CR absorbing part. An overview of relevant experimental results from reactor LR-0 and some information concerning leaking FAs on NPP Temelín are presented. Obtained data can be used for code validation and subsequently for the fuel failure occurrence investigation.

Genetic analysis reveals efficient sexual spore dispersal at a fine spatial scale in Armillaria ostoyae, the causal agent of root-rot disease in conifers.

Science.gov (United States)

Dutech, Cyril; Labbé, Frédéric; Capdevielle, Xavier; Lung-Escarmant, Brigitte

Armillaria ostoyae (sometimes named Armillaria solidipes) is a fungal species causing root diseases in numerous coniferous forests of the northern hemisphere. The importance of sexual spores for the establishment of new disease centres remains unclear, particularly in the large maritime pine plantations of southwestern France. An analysis of the genetic diversity of a local fungal population distributed over 500 ha in this French forest showed genetic recombination between genotypes to be frequent, consistent with regular sexual reproduction within the population. The estimated spatial genetic structure displayed a significant pattern of isolation by distance, consistent with the dispersal of sexual spores mostly at the spatial scale studied. Using these genetic data, we inferred an effective density of reproductive individuals of 0.1-0.3 individuals/ha, and a second moment of parent-progeny dispersal distance of 130-800 m, compatible with the main models of fungal spore dispersal. These results contrast with those obtained for studies of A. ostoyae over larger spatial scales, suggesting that inferences about mean spore dispersal may be best performed at fine spatial scales (i.e. a few kilometres) for most fungal species. Copyright © 2017 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

Estimation of fractional contribution of root respiration to a forest-floor CO2 flux using carbon isotopes

International Nuclear Information System (INIS)

Hachiya, Masashi; Moriizumi, Jun; Yamazawa, Hiromi

2010-01-01

Efflux of soil respired carbon dioxide(CO 2 ) is very important component for the global carbon cycle and dynamics of 14 C in environment, and to predict the global climate changes caused by increasing CO 2 concentrations in the atmosphere. There are two components that generate CO 2 in soil, soil organic matter decomposition and root respiration. Although the former is relatively well understood, the root-derived CO 2 efflux has not been evaluated sufficiently. The objective of our research is to estimate depth profile of the root respiration rate. Thus we developed a box model which calculates the depth profile. In this paper, we discussed about (1) the adequacy of calculated result by comparing it to the to observed soil respired CO 2 flux with trenching method and (2) sensitivity of the box model to uncertainty in the input data. The result showed that the depth profile of root respiration rate decreased with soil depth. This is attributed to the distribution of fine roots which dominate root respiration. The model results reasonable agreed with the measurement results and characteristics of root respiration. The output of the model was robust to the variation of the input data. (author)

Root growth of Lotus corniculatus interacts with P distribution in young sandy soil

Directory of Open Access Journals (Sweden)

B. Felderer

2013-03-01

Full Text Available Large areas of land are restored with unweathered soil substrates following mining activities in eastern Germany and elsewhere. In the initial stages of colonization of such land by vegetation, plant roots may become key agents in generating soil formation patterns by introducing gradients in chemical and physical soil properties. On the other hand, such patterns may be influenced by root growth responses to pre-existing substrate heterogeneities. In particular, the roots of many plants were found to preferentially proliferate into nutrient-rich patches. Phosphorus (P is of primary interest in this respect because its availability is often low in unweathered soils, limiting especially the growth of leguminous plants. However, leguminous plants occur frequently among the pioneer plant species on such soils, as they only depend on atmospheric nitrogen (N fixation as N source. In this study we investigated the relationship between root growth allocation of the legume Lotus corniculatus and soil P distribution on recently restored land. As test sites, the experimental Chicken Creek Catchment (CCC in eastern Germany and a nearby experimental site (ES with the same soil substrate were used. We established two experiments with constructed heterogeneity, one in the field on the experimental site and the other in a climate chamber. In addition, we conducted high-density samplings on undisturbed soil plots colonized by L. corniculatus on the ES and on the CCC. In the field experiment, we installed cylindrical ingrowth soil cores (4.5 × 10 cm with and without P fertilization around single two-month-old L. corniculatus plants. Roots showed preferential growth into the P-fertilized ingrowth-cores. Preferential root allocation was also found in the climate chamber experiment, where single L. corniculatus plants were grown in containers filled with ES soil and where a lateral portion of the containers was additionally supplied with a range of different P

Fine-scale hydrodynamics influence the spatio-temporal distribution of harbour porpoises at a coastal hotspot

Science.gov (United States)

Jones, A. R.; Hosegood, P.; Wynn, R. B.; De Boer, M. N.; Butler-Cowdry, S.; Embling, C. B.

2014-11-01

The coastal Runnelstone Reef, off southwest Cornwall (UK), is characterised by complex topography and strong tidal flows and is a known high-density site for harbour porpoise (Phocoena phocoena); a European protected species. Using a multidisciplinary dataset including: porpoise sightings from a multi-year land-based survey, Acoustic Doppler Current Profiling (ADCP), vertical profiling of water properties and high-resolution bathymetry; we investigate how interactions between tidal flow and topography drive the fine-scale porpoise spatio-temporal distribution at the site. Porpoise sightings were distributed non-uniformly within the survey area with highest sighting density recorded in areas with steep slopes and moderate depths. Greater numbers of sightings were recorded during strong westward (ebbing) tidal flows compared to strong eastward (flooding) flows and slack water periods. ADCP and Conductivity Temperature Depth (CTD) data identified fine-scale hydrodynamic features, associated with cross-reef tidal flows in the sections of the survey area with the highest recorded densities of porpoises. We observed layered, vertically sheared flows that were susceptible to the generation of turbulence by shear instability. Additionally, the intense, oscillatory near surface currents led to hydraulically controlled flow that transitioned from subcritical to supercritical conditions; indicating that highly turbulent and energetic hydraulic jumps were generated along the eastern and western slopes of the reef. The depression and release of isopycnals in the lee of the reef during cross-reef flows revealed that the flow released lee waves during upslope currents at specific phases of the tidal cycle when the highest sighting rates were recorded. The results of this unique, fine-scale field study provide new insights into specific hydrodynamic features, produced through tidal forcing, that may be important for creating predictable foraging opportunities for porpoises at a

Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

Science.gov (United States)

Allman, Elizabeth S; Degnan, James H; Rhodes, John A

2011-06-01

Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

Modified Feddes type stress reduction function for modeling root water uptake: Accounting for limited aeration and low water potential

Science.gov (United States)

Peters, Andre; Durner, Wolfgang; Iden, Sascha C.

2017-04-01

Modeling water flow in the soil-plant-atmosphere continuum with the Richards equation requires a model for the sink term describing water uptake by plant roots. Despite recent progress in developing process-based models of water uptake by plant roots and water flow in aboveground parts of vegetation, effective models of root water uptake are widely applied and necessary for large-scale applications. Modeling root water uptake consists of three steps, (i) specification of the spatial distribution of potential uptake, (ii) reduction of uptake due to various stress sources, and (iii) enhancement of uptake in part of the simulation domain to describe compensation. We discuss the conceptual shortcomings of the frequently used root water uptake model of Feddes and suggest a simple but effective improvement of the model. The improved model parametrizes water stress in wet soil by a reduction scheme which is formulated as function of air content where water stress due to low soil water potential is described by the original approach of Feddes. The improved model is physically more consistent than Feddes' model because water uptake in wet soil is limited by aeration which is a function of water content. The suggested modification is particularly relevant for simulations in heterogeneous soils, because stress parameters are uniquely defined for the entire simulation domain, irrespective of soil texture. Numerical simulations of water flow and root water uptake in homogeneous and stochastic heterogeneous soils illustrate the effect of the new model on root water uptake and actual transpiration. For homogeneous fine-textured soils, root water uptake never achieves its potential rate. In stochastic heterogeneous soil, water uptake is more pronounced at the interfaces between fine and coarse regions which has potential implications for plant growth, nutrient uptake and depletion.

Hypocotyl adventitious root organogenesis differs from lateral root development.

Science.gov (United States)

Verstraeten, Inge; Schotte, Sébastien; Geelen, Danny

2014-01-01

Wound-induced adventitious root (AR) formation is a requirement for plant survival upon root damage inflicted by pathogen attack, but also during the regeneration of plant stem cuttings for clonal propagation of elite plant varieties. Yet, adventitious rooting also takes place without wounding. This happens for example in etiolated Arabidopsis thaliana hypocotyls, in which AR initiate upon de-etiolation or in tomato seedlings, in which AR initiate upon flooding or high water availability. In the hypocotyl AR originate from a cell layer reminiscent to the pericycle in the primary root (PR) and the initiated AR share histological and developmental characteristics with lateral roots (LRs). In contrast to the PR however, the hypocotyl is a determinate structure with an established final number of cells. This points to differences between the induction of hypocotyl AR and LR on the PR, as the latter grows indeterminately. The induction of AR on the hypocotyl takes place in environmental conditions that differ from those that control LR formation. Hence, AR formation depends on differentially regulated gene products. Similarly to AR induction in stem cuttings, the capacity to induce hypocotyl AR is genotype-dependent and the plant growth regulator auxin is a key regulator controlling the rooting response. The hormones cytokinins, ethylene, jasmonic acid, and strigolactones in general reduce the root-inducing capacity. The involvement of this many regulators indicates that a tight control and fine-tuning of the initiation and emergence of AR exists. Recently, several genetic factors, specific to hypocotyl adventitious rooting in A. thaliana, have been uncovered. These factors reveal a dedicated signaling network that drives AR formation in the Arabidopsis hypocotyl. Here we provide an overview of the environmental and genetic factors controlling hypocotyl-born AR and we summarize how AR formation and the regulating factors of this organogenesis are distinct from LR

Hypocotyl adventitious root organogenesis differs from lateral root development

Directory of Open Access Journals (Sweden)

Inge eVerstraeten

2014-09-01

Full Text Available Wound-induced adventitious root (AR formation is a requirement for plant survival upon root damage inflicted by pathogen attack, but also during the regeneration of plant stem cuttings for clonal propagation of elite plant varieties. Yet, adventitious rooting also takes place without wounding. This happens for example in etiolated Arabidopsis thaliana hypocotyls, in which AR initiate upon de-etiolation or in tomato seedlings, in which AR initiate upon flooding or high water availability. In the hypocotyl AR originate from a cell layer reminiscent to the pericycle in the primary root (PR and the initiated AR share histological and developmental characteristics with lateral roots (LR. In contrast to the PR however, the hypocotyl is a determinate structure with an established final number of cells. This points to differences between the induction of hypocotyl AR and LR on the PR, as the latter grows indeterminately. The induction of AR on the hypocotyl takes place in environmental conditions that differ from those that control LR formation. Hence, AR formation depends on differentially regulated gene products. Similarly to AR induction in stem cuttings, the capacity to induce hypocotyl AR is genotype-dependent and the plant growth regulator auxin is a key regulator controlling the rooting response. The hormones cytokinins, ethylene, jasmonic acid and strigolactones in general reduce the root-inducing capacity. The involvement of this many regulators indicates that a tight control and fine-tuning of the initiation and emergence of AR exists. Recently, several genetic factors, specific to hypocotyl adventitious rooting in Arabidopsis thaliana, have been uncovered. These factors reveal a dedicated signaling network that drives AR formation in the Arabidopsis hypocotyl. Here we provide an overview of the environmental and genetic factors controlling hypocotyl-born AR and we summarize how AR formation and the regulating factors of this organogenesis are

Studies using 32P to determine the distribution and activity patterns of the oil palm root system in Nigeria

International Nuclear Information System (INIS)

Omoti, U.

1982-01-01

Results of studies of the root distribution and root activity which have been conducted by the Nigerian Institute for Oil Palm Research over the last twenty-three years are presented. Previous laborious studies involving washing the soil from the entire root system have shown that the oil palm root system is typically monocotyledonous with superficial and deeply penetrating primaries, ascending and descending secondaries with numerous tertiaries and quaternaries in the surface layers forming the main feeding roots. Radioisotope studies showed that the greatest concentration and activity of the nutrient absorbing roots occurred within the top 30 cm of soil. There were zones of root concentration and root activity close to the palm. High root activity was also obtained up to 4 m from the palm. During the dry season, the oil palm roots die back thus leading to a reduced zone of root activity. The implications of the findings for fertilizer placement for maximum efficiency of utilization by the whole plantation and the need for further experimentation are discussed. (author)

Particle size distribution and property of bacteria attached to carbon fines in drinking water treatment

Directory of Open Access Journals (Sweden)

Wang Leilei

2008-06-01

Full Text Available The quantitative change and size distribution of particles in the effluents from a sand filter and a granular activated carbon (GAC filter in a drinking water treatment plant were investigated. The average total concentration of particles in the sand filter effluent during a filter cycle was 148 particles/mL, 27 of which were larger than 2 µm in size. The concentration in the GAC effluent (561 particles/mL was significantly greater than that in the sand filter effluent. The concentration of particles larger than 2 µm in the GAC filter effluent reached 201 particles/mL, with the amount of particles with sizes between 2 µm and 15 µm increasing. The most probable number (MPN of carbon fines reached 43 unit/L after six hours and fines between 0.45 µm and 8.0 µm accounted for more than 50%. The total concentration of outflowing bacteria in the GAC filter effluent, 350 CFU (colony-forming units/mL, was greater than that in the sand filter effluent, 210 CFU/mL. The desorbed bacteria concentration reached an average of 310 CFU/mg fines. The disinfection efficiency of desorbed bacteria was lower than 40% with 1.5 mg/L of chlorine. The disinfection effect showed that the inactivation rate with 2.0 mg/L of chloramine (90% was higher than that with chlorine (70%. Experimental results indicated that the high particle concentration in raw water and sedimentation effluent led to high levels of outflowing particles in the sand filter effluent. The activated carbon fines in the effluent accounted for a small proportion of the total particle amount, but the existing bacteria attached to carbon fines may influence the drinking water safety. The disinfection efficiency of desorbed bacteria was lower than that of free bacteria with chlorine, and the disinfection effect on bacteria attached to carbon fines with chloramine was better than that with only chlorine.

3D Electrical Resistivity Tomography and Mise-à-la-Masse Method as Tools for the Characterization of Vine Roots

Science.gov (United States)

Boaga, J.; Mary, B.; Peruzzo, L.; Schmutz, M.; Wu, Y.; Hubbard, S. S.; Cassiani, G.

2017-12-01

The interest on non-invasive geophysical monitoring of soil properties and root architecture is rapidly growing. Despite this, few case studies exist concerning vineyards, which are economically one of the leading sectors of agriculture. In this study, we integrate different geophysical methods in order to gain a better imaging of the vine root system, with the aim of quantifying root development, a key factor to understand roots-soil interaction and water balance. Our test site is a vineyard located in Bordeaux (France), where we adopted the Mise-a-la-Masse method (MALM) and micro-scale electrical resistivity tomography (ERT) on the same 3D electrode configuration. While ERT is a well-established technique to image changes in soil moisture content by root activity, MALM is a relatively new approach in this field of research. The idea is to inject current directly in the plant trunk and verify the resulting voltage distribution in the soil, as an effect of current distribution through the root system. In order to distinguish the root effect from other phenomena linked to the soil heterogeneities, we conducted and compared MALM measurements acquired through injecting current into the stem and into the soil near the stem. Moreover, the MALM data measured in the field were compared with numerical simulations to improve the confidence in the interpretation. Differences obtained between the stem and soil injection clearly validated the assumption that the whole root system is acting as a current pathway, thus highlighting the locations at depth where current is entering the soil from the fine roots. The simulation results indicated that the best fit is obtained through considering distributed sources with depth, reflecting a probable root zone area. The root location and volume estimated using this procedure are in agreement with vineyard experimental evidence. This work suggests the promising application of electrical methods to locate and monitor root systems. Further

Fine scale distribution constrains cadmium accumulation rates in two geographical groups of Franciscana dolphin from Argentina

International Nuclear Information System (INIS)

Polizzi, P.S.; Chiodi Boudet, L.N.; Romero, M.B.; Denuncio, P.E.; Rodríguez, D.H.

2013-01-01

Highlights: • Fine scale distribution of two Argentine stocks constrains the Cd accumulation rates. • Cadmium levels and accumulation patterns were different between geographic groups. • Marine diet has a major influence than the impact degree of origin environment. • Engraulis anchoita is the main Cd vector species in Argentine shelf for Franciscana. • Information is valuable for the conservation of Franciscana, a vulnerable species. -- Abstract: Franciscana dolphin is an endemic cetacean in the southwestern Atlantic Ocean and is classified as Vulnerable A3d by the International Union for Conservation of Nature. Cadmium accumulation was assessed in two geographic groups from Argentina; one inhabits the La Plata River estuary, a high anthropogenic impacted environment, and the other is distributed in marine coastal, with negligible pollution. Despite the environment, marine dolphins showed an increase of renal Cd concentrations since trophic independence; while in estuarine dolphins was from 6 years. This is associated with dietary Argentine anchovy which was absent in the diet of estuarine dolphins, being a trophic vector of cadmium in shelf waters of Argentina. Cluster analysis also showed high levels of cd in association with the presence of anchovy in the stomach. The difference in the fine scale distribution of species influences dietary exposure to Cd and, along with other data, indicates two stocks in Argentina

Use of isotopes in root activities and distribution studies

International Nuclear Information System (INIS)

Nario M, Adriana; Pino N, Ines; Albornoz G, Maria Paz; Baherle V, Pedro

2003-01-01

Several studies shown the relevance of the plant's root activity pattern knowledge, across the profile, to determine the suitable zone to apply the nutrients and irrigation to the plant. In Chile, the studies with the isotopes 15 N and 32 P had been used to carry out applications in solution across the soil profile and in lateral distances from the plant in fruit trees and prairies to determine root activity pattern. In peaches, under furrow irrigation, the major root concentration was found at 20 cm depth and 1 m lateral distance from the trunk. Table grapes, under drip irrigation, presented more root activity at 40 cm depth and under the dripper line in lateral distance. In prairies, the root activity was found between 10 to 40 cm depth, depending on the root capacity to explore the profile (author)

Limitations of the 32P isotope injection technique for the study of the root systems of wheat, mung and cowpeas

International Nuclear Information System (INIS)

Vijayalakshmi, K.; Dakshinamurti, C.

1977-01-01

The 32 P isotope injection technique developed by earlier investigators for graminea has been extensively tested, under irragated agriculture, using three promising varieties of wheat, mung bean and cowpea plants. Field experiments supported by pot experiments using both sand and soil cultures gave identical results. Unlike the wheats with a succulant stem the legumes are fibrous and do not permit injection in the stem. The technique was, therefore, modified and the injection had to be given in the leaf stem instead of the plant stem. While equilibrium in wheat was obtained five days after injection both in pot and field experiment mung behaves in a different manner. In the pot experiments the equilibrium could not be attained till the 12th day while in the field experiments it was attained even on the first day after injection. Mung has a thick tap root surrounded by fine secondary roots. The activity was observed to move very fast in the thick tap root even on the first day while the thin secondary roots showed resistance and attained equilibrium on the 3rd day. The anomaly observed in the pot and field experiments was attributed partly to the differential root growth under the two environments studied and to some extent to the probable loss of fine roots in the collection on the field. However, both pot and field plants attained equilibrium on the 12th day. In the case of cowpeas the equilibrium was attained on the 8th day. The period required for attaining uniform distribution of activity thus seems to be a function of the morphology of the plant, the pattern of the root system and the injection technique adopted. As this is a pre-requisite for the quantitative estimation of the roots care has to be taken in perfecting the technique

Effect of Piriformospora indica inoculation on root development and distribution of maize (Zea mays L.) in the presence of petroleum contaminated soil

Science.gov (United States)

Zamani, Javad; Hajabbasi, Mohammad Ali; Alaie, Ebrahim

2014-05-01

The root systems of most terrestrial plants are confronted to various abiotic and biotic stresses. One of these abiotic stresses is contamination of soil with petroleum hydrocarbon, which the efficiency of phytoremediation of petroleum hydrocarbons in soils is dependent on the ability of plant roots to development into the contaminated soils. Piriformospora indica represents a recently discovered fungus that transfers considerable beneficial impact to its host plants. A rhizotron experiment was conducted to study the effects of P. Indica inoculation on root distribution and root and shoot development of maize (Zea mays L.) in the presence of three patterns of petroleum contamination in the soil (subsurface contamination, continuous contamination and without contamination (control)). Root distribution and root and shoot development were monitored over time. The final root and shoot biomass and the final TPH concentration in the rhizosphere were determined. Analysis of digitized images which were prepared of the tracing of the appeared roots along the front rhizotrons showed the depth and total length of root network in the contamination treatments were significantly decreased. Although the degradation of TPH in the rhizosphere of maize was significant, but there were no significant differences between degradation of TPH in the rhizosphere of +P. indica plants in comparison to -P. indica plants.

Subcellular distribution of uranium in the roots of Spirodela punctata and surface interactions

Energy Technology Data Exchange (ETDEWEB)

Nie, Xiaoqin, E-mail: xiaoqin_nie@163.com [Fundamental Science on Nuclear Wastes and Environmental Safety Laboratory, Mianyang 621010 (China); Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu 610064 (China); Dong, Faqin, E-mail: fqdong2004@163.com [Fundamental Science on Nuclear Wastes and Environmental Safety Laboratory, Mianyang 621010 (China); Liu, Ning [Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu 610064 (China); Liu, Mingxue [Fundamental Science on Nuclear Wastes and Environmental Safety Laboratory, Mianyang 621010 (China); Zhang, Dong; Kang, Wu [Institute of Nuclear Physics and Chemistry,China Academy of Engineering Physics, Mianyang 621900 (China); Sun, Shiyong; Zhang, Wei; Yang, Jie [Fundamental Science on Nuclear Wastes and Environmental Safety Laboratory, Mianyang 621010 (China)

2015-08-30

Graphical abstract: - Highlights: • The proportion of uranium concentration approximate as 8:2:1 in the cell wall organelle and cytosol fractions of roots of S. punctata. • The particles including 35% Fe (wt%) released from the cells after 100 mg/L U treatment 48 h. • Most of the uranium bound onto the root surface and contacted with phosphorus ligands and formed as nano-scales U-P lamellar crystal. • FTIR and XPS analyses result indicates the uranium changed the band position and shapes of phosphate group, and the region of characteristic peak belongs to U(VI) and U(IV) were also observed. - Abstract: The subcellular distribution of uranium in roots of Spirodela punctata (duckweed) and the process of surface interaction were studied upon exposure to U (0, 5–200 mg/L) at pH 5. The concentration of uranium in each subcelluar fraction increased significantly with increasing solution U level, after 200 mg/L uranium solution treatment 120 h, the proportion of uranium concentration approximate as 8:2:1 in the cell wall organelle and cytosol fractions of roots of S. punctata. OM SEM and EDS showed after 5–200 mg/L U treatment 4–24 h, some intracellular fluid released from the root cells, after 100 mg/L U treatment 48 h, the particles including 35% Fe (wt%) and other organic matters such as EPS released from the cells, most of the uranium bound onto the root surface and contacted with phosphorus ligands and formed as nano-scales U-P lamellar crystal, similar crystal has been found in the cell wall and organelle fractions after 50 mg/L U treatment 120 h. FTIR and XPS analyses result indicates the uranium changed the band position and shapes of phosphate group, and the region of characteristic peak belongs to U(VI) and U(IV) were also observed.

Root distribution of Nitraria sibirica with seasonally varying water sources in a desert habitat.

Science.gov (United States)

Zhou, Hai; Zhao, Wenzhi; Zheng, Xinjun; Li, Shoujuan

2015-07-01

In water-limited environments, the water sources used by desert shrubs are critical to understanding hydrological processes. Here we studied the oxygen stable isotope ratios (δ (18)O) of stem water of Nitraria sibirica as well as those of precipitation, groundwater and soil water from different layers to identify the possible water sources for the shrub. The results showed that the shrub used a mixture of soil water, recent precipitation and groundwater, with shallow lateral roots and deeply penetrating tap (sinker) roots, in different seasons. During the wet period (in spring), a large proportion of stem water in N. sibirica was from snow melt and recent precipitation, but use of these sources declined sharply with the decreasing summer rain at the site. At the height of summer, N. sibirica mainly utilized deep soil water from its tap roots, not only supporting the growth of shoots but also keeping the shallow lateral roots well-hydrated. This flexibility allowed the plants to maintain normal metabolic processes during prolonged periods when little precipitation occurs and upper soil layers become extremely dry. With the increase in precipitation that occurs as winter approaches, the percentage of water in the stem base of a plant derived from the tap roots (deep soil water or ground water) decreased again. These results suggested that the shrub's root distribution and morphology were the most important determinants of its ability to utilize different water sources, and that its adjustment to water availability was significant for acclimation to the desert habitat.

Adaptive root foraging strategies along a boreal–temperate forest gradient

Czech Academy of Sciences Publication Activity Database

Ostonen, I.; Truu, M.; Helmisaari, H.-S.; Lukač, M.; Borken, W.; Vanguelova, H.; Godbold, Douglas; Löhmus, K.; Zang, U.; Tedersoo, L.; Preem, J.-K.; Rosenvald, K.; Aosaar, J.; Armolaitis, K.; Frey, J.; Kabral, N.; Kukumägi, M.; Leppälammi-Kujansuu, J.; Lindroos, A.-J.; Merila, P.; Napa, Ü.; Nöjd, P.; Parts, K.; Uri, V.; Varik, M.; Truu, J.

2017-01-01

Roč. 215, č. 3 (2017), s. 977-991 ISSN 0028-646X EU Projects: European Commission(XE) 315982; European Commission(XE) 315982; European Commission(XE) 90/E38 Institutional support: RVO:67179843 Keywords : boreal and temperate forests * climate gradient * ectomycorrhizal (EcM) mycelium * fine and ectomycorrhizal root biomass * root foraging * root morphology * soil and rhizosphere bacteria * soil C * N ratio Subject RIV: EF - Botanics OBOR OECD: Plant sciences, botany Impact factor: 7.330, year: 2016

Roots distribution of Jatropha curcas trees in Brazilian savana; Distribuicao das raizes de plantas adultas de pinhao manso no cerrado

Energy Technology Data Exchange (ETDEWEB)

Araujo, Fausto J.M.; Costa, Hugo T.; Alves Junior, Jose; Evangelista, Adao W.P.; Oliveira, Pedro H. L. de [Universidade Federal de Goias (EA/UFG), Goiania, GO (Brazil). Escola de Agronomia e Eng. de Alimentos], E-mail: jose.junior@pq.cnpq.br

2010-07-01

The Jatropha curcas L. presents a great potential for fuel, but there are few studies to assess roots distribution of this species. The root system is responsible for water uptake and should be considered in irrigation water requirement calculations. Studies show that Jatropha curcas trees irrigated can be double productivity. The objective of the work was to evaluate root distribution of Jatropha curcas L. trees spacing 3 x 2 m in a Clay soil of Brazilian Savana (Porangatu, north of Goias state). The evaluation was carried in three trees non-irrigated with three years old, five deeps 0.0-0.30 m, 0.30-0.60 m, 0.60-0.90 m, 0.90-1.2, 1.2-1.5 m and five distances from the trunk 0.0-0.25; 0.25-0.50; 0.50-0.75, 0.75-1.0 and 1.0-1.25 m. Trenches were dug from the plant trunk longitudinally and orthogonally in respect to row plants. Afterwards, root samples were collected according to the monolith method and separated from the soil. Root length and root density were determined by using grid 1 cm{sup 2}. The results showed more than 80% of roots concentrated at 0.0-1.0 m of deep, 1.0 m horizontal distance from the trunk. (author)

Root biomass, turnover and net primary productivity of a coffee agroforestry system in Costa Rica: effects of soil depth, shade trees, distance to row and coffee age.

Science.gov (United States)

Defrenet, Elsa; Roupsard, Olivier; Van den Meersche, Karel; Charbonnier, Fabien; Pastor Pérez-Molina, Junior; Khac, Emmanuelle; Prieto, Iván; Stokes, Alexia; Roumet, Catherine; Rapidel, Bruno; de Melo Virginio Filho, Elias; Vargas, Victor J; Robelo, Diego; Barquero, Alejandra; Jourdan, Christophe

2016-08-21

In Costa Rica, coffee (Coffea arabica) plants are often grown in agroforests. However, it is not known if shade-inducing trees reduce coffee plant biomass through root competition, and hence alter overall net primary productivity (NPP). We estimated biomass and NPP at the stand level, taking into account deep roots and the position of plants with regard to trees. Stem growth and root biomass, turnover and decomposition were measured in mixed coffee/tree (Erythrina poeppigiana) plantations. Growth ring width and number at the stem base were estimated along with stem basal area on a range of plant sizes. Root biomass and fine root density were measured in trenches to a depth of 4 m. To take into account the below-ground heterogeneity of the agroforestry system, fine root turnover was measured by sequential soil coring (to a depth of 30 cm) over 1 year and at different locations (in full sun or under trees and in rows/inter-rows). Allometric relationships were used to calculate NPP of perennial components, which was then scaled up to the stand level. Annual ring width at the stem base increased up to 2·5 mm yr -1 with plant age (over a 44-year period). Nearly all (92 %) coffee root biomass was located in the top 1·5 m, and only 8 % from 1·5 m to a depth of 4 m. Perennial woody root biomass was 16 t ha -1 and NPP of perennial roots was 1·3 t ha -1 yr -1 Fine root biomass (0-30 cm) was two-fold higher in the row compared with between rows. Fine root biomass was 2·29 t ha -1 (12 % of total root biomass) and NPP of fine roots was 2·96 t ha -1 yr -1 (69 % of total root NPP). Fine root turnover was 1·3 yr -1 and lifespan was 0·8 years. Coffee root systems comprised 49 % of the total plant biomass; such a high ratio is possibly a consequence of shoot pruning. There was no significant effect of trees on coffee fine root biomass, suggesting that coffee root systems are very competitive in the topsoil. © The Author 2016. Published by Oxford University Press on

FINE ROOT TURNOVER IN PONDEROSA PINE STANDS OF DIFFERENT AGES: FIRST-YEAR RESULTS

Science.gov (United States)

Root minirhizotron tubs were installed in two ponderosa pine (Pinus ponderosa Laws.) Stands of different ages to examine patterns of root growth and death. The old-growth site (OS) consists of a mixture of old (>250 years) and young trees (ca.45 yrs)< and is located near clamp S...

Root Morphology Was Improved in a Late-Stage Vigor Super Rice Cultivar.

Directory of Open Access Journals (Sweden)

Min Huang

Full Text Available This study aimed to test the hypothesis that root morphology might be improved and consequently contributing to superior post-heading shoot growth and grain yield in late-stage vigor super rice. A pot experiment was carried out to compare yield attributes, shoot growth and physiological properties and root morphological traits between a late-stage vigor super rice cultivar (Y-liangyou 087 and an elite rice cultivar (Teyou 838. Grain yield and total shoot biomass were 7-9% higher in Y-liangyou 087 than in Teyou 838. Y-liangyou 087 had 60-64% higher post-heading shoot growth rate and biomass production than Teyou 838. Average relative chlorophyll concentration and net photosynthetic rate in flag leaves were 7-11% higher in Y-liangyou 087 than in Teyou 838 during heading to 25 days after heading. Y-liangyou 087 had 41% higher post-heading shoot N uptake but 17-25% lower root biomass and root-shoot ratio at heading and maturity than Teyou 838. Specific root length and length and surface area of fine roots were higher in Y-liangyou 087 than in Teyou 838 at heading and maturity by more than 15%. These results indicated that root-shoot relationships were well balanced during post-heading phase in the late-stage vigor super rice cultivar Y-liangyou 087 by improving root morphology including avoiding a too great root biomass and developing a large fine root system.

Root Morphology Was Improved in a Late-Stage Vigor Super Rice Cultivar.

Science.gov (United States)

Huang, Min; Chen, Jiana; Cao, Fangbo; Jiang, Ligeng; Zou, Yingbin

2015-01-01

This study aimed to test the hypothesis that root morphology might be improved and consequently contributing to superior post-heading shoot growth and grain yield in late-stage vigor super rice. A pot experiment was carried out to compare yield attributes, shoot growth and physiological properties and root morphological traits between a late-stage vigor super rice cultivar (Y-liangyou 087) and an elite rice cultivar (Teyou 838). Grain yield and total shoot biomass were 7-9% higher in Y-liangyou 087 than in Teyou 838. Y-liangyou 087 had 60-64% higher post-heading shoot growth rate and biomass production than Teyou 838. Average relative chlorophyll concentration and net photosynthetic rate in flag leaves were 7-11% higher in Y-liangyou 087 than in Teyou 838 during heading to 25 days after heading. Y-liangyou 087 had 41% higher post-heading shoot N uptake but 17-25% lower root biomass and root-shoot ratio at heading and maturity than Teyou 838. Specific root length and length and surface area of fine roots were higher in Y-liangyou 087 than in Teyou 838 at heading and maturity by more than 15%. These results indicated that root-shoot relationships were well balanced during post-heading phase in the late-stage vigor super rice cultivar Y-liangyou 087 by improving root morphology including avoiding a too great root biomass and developing a large fine root system.

Limitations of the /sup 32/P isotope injection technique for the study of the root systems of wheat, mung and cowpeas

Energy Technology Data Exchange (ETDEWEB)

Vijayalakshmi, K [Dry Land Agriculture Centre, Hyderabad (India); Dakshinamurti, C [International Atomic Energy Agency, Mymensingh (Bangladesh)

1977-01-01

The /sup 32/P isotope injection technique developed by earlier investigators for graminea has been extensively tested, under irragated agriculture, using three promising varieties of wheat, mung bean and cowpea plants. Field experiments supported by pot experiments using both sand and soil cultures gave identical results. Unlike the wheats with a succulant stem the legumes are fibrous and do not permit injection in the stem. The technique was, therefore, modified and the injection had to be given in the leaf stem instead of the plant stem. While equilibrium in wheat was obtained five days after injection both in pot and field experiment mung behaves in a different manner. In the pot experiments the equilibrium could not be attained till the 12th day while in the field experiments it was attained even on the first day after injection. Mung has a thick tap root surrounded by fine secondary roots. The activity was observed to move very fast in the thick tap root even on the first day while the thin secondary roots showed resistance and attained equilibrium on the 3rd day. The anomaly observed in the pot and field experiments was attributed partly to the differential root growth under the two environments studied and to some extent to the probable loss of fine roots in the collection on the field. However, both pot and field plants attained equilibrium on the 12th day. In the case of cowpeas the equilibrium was attained on the 8th day. The period required for attaining uniform distribution of activity thus seems to be a function of the morphology of the plant, the pattern of the root system and the injection technique adopted. As this is a pre-requisite for the quantitative estimation of the roots care has to be taken in perfecting the technique.

Seasonal dynamics of structure and functional activity of ectomycorrhizal roots of the Siberian fir

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T. A. Sizonenko

2017-12-01

Full Text Available The aim of our work was to study seasonal dynamics of the Siberian fir Abies sibirica Ledeb. ectomycorrhizal morpho-anatomical structure, respiration rate and fluorescence. The study was carried out in the bilberry-sphagnum spruce forest in the middle taiga of the Komi Republic, Russia. The morpho-anatomical structure and fluorescence parameters were studied by light and luminescence microscopy. Thin root respiration was studied in intact fine roots in the field using an infrared gas analyzer. 12 subtypes of fungal mantels were revealed in ectomycorrhizal fir roots; their amount and composition demonstrated seasonal dynamic changes. At the beginning vegetation stage, the diversity and proportion of pseudoparenchymatous and double covers were maximal. Plant component of ectomycorrhizae that includes cortical parenchyma and stele had high activity of fluorescence during the entire vegetation period. The dynamics of staining of fungal component (fungal mantel and Hartig net was more contrasting. The highest fluorescence intensity of cortical parenchyma was found in ectomycorrhizae with maximal fungal mantel thickness. High proportion of tannin cells in cortical parenchyma was related with low intensity of fungal mantel and Hartig net fluorescence. During vegetation season, maximal amount of intensively strained ectomycorrhizal elements occurred in July and unstrained – in June and August. Relation between fine roots respiration and an increase of brightly strained ectomycorrhizal structural elements in fir roots was not statistically significant. Root CO2-emission was lower in May and September in comparison with summer months. For respiration rate of fir fine roots we found its strong positive correlation with the litter temperature.

Stress differentially impacts reserve pools and root exudation: implications for ecosystem functioning and carbon balance

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Landhäusser, Simon; Karst, Justine; Wiley, Erin; Gaster, Jacob

2016-04-01

Environmental stress can influence carbon assimilation and the accumulation and distribution of carbon between growth, reserves, and exudation; however, it is unclear how these processes vary by different stress types. Partitioning of carbon to growth and reserves in plants might also vary between different organs. Roots reserves are of particular interest as they link the plant with the soil carbon cycle through exudation. Simple models of diffusion across concentration gradients predict the more C reserves in roots, the more C should be exuded from roots. However, the mechanisms underlying the accumulation and loss of C from roots may differ depending on the stress experienced by the plants. In a controlled study we tested whether different types of stresses (shade, cold soil, and drought) have differential effects on the distribution, abundance, and form (sugar vs. starch) of carbohydrates in seedlings, and whether these changes alone could explain differences in root exudation between stress types. Non-structural carbohydrate (NSC) concentration and pool sizes varied by stress type and between organs. Mass-specific C exudation increased with fine root sugar concentration; however, stress type affected exudation independently of reserve concentration. Seedlings exposed to cold soils exuded the most C on a per root mass basis followed by shade and drought. Through 13C labeling, we also found that depending on the stress type, aspen seedlings may be less able to control the loss of C to the soil compared with unstressed seedlings, resulting in more C leaked to the rhizosphere. The loss of C beyond that predicted by simple concentration gradients might have important implications for ecosystem functioning and carbon balance. If stressed plants lose proportionally more carbon to the soil, existing interactions between plants and soils may decouple under stress, and may include unexpected C fluxes between trees, soils and the atmosphere with a changing climate.

Root respiration in North American forests: Effects of nitrogen concentration and temperature across biomes

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A.J. Burton; K.S. Pregitzer; R.W. Ruess; R.L. Hendrick; Mike F. Allen

2002-01-01

Root respiration rates have been shown to be correlated with temperature and root N concentration in studies of individual forest types or species, but it is not known how universal these relationships are across forest species adapted to widely different climatic and edaphic conditions. In order to test for broad, cross-species relationships, we measured fine root...

Heavy metal distribution in a spruce ecosystem in the Solling mountains

International Nuclear Information System (INIS)

Schultz, R.; Lamersdorf, N.

1989-01-01

In this investigation the distribution of Cr, Co, Cu, Zn, Cd and Pb was studied in a spruce forest. Heavy metal content was analysed in different compartments of the ecosystem. Inventory of these elements was calculated for tree layer, humus layer and upper soil. A decrease in meter concentration in wood from root to shoot showed strong immobilization of heavy metals in roots. Increasing content of Cu in wood of branches can be explained as storage of this micronutrient. Atmospherically deposited Cr, Cu and Pb were strongly adsorbed to organic substances and accumulate in bark, dead fine roots and humus layer. On the other hand Zn and Cd are more mobile in the ecosystem. High amounts of these elements were found in biomass. Accumulation in bark probably can be a strategy of the tree to store these elements in physiologically inactive forms. Increasing mobilization of Zn, Cd and Co in soil led to intensified root uptake and to higher seepage output. (orig.)

Revisiting the two-layer hypothesis: coexistence of alternative functional rooting strategies in savannas.

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Holdo, Ricardo M

2013-01-01

The two-layer hypothesis of tree-grass coexistence posits that trees and grasses differ in rooting depth, with grasses exploiting soil moisture in shallow layers while trees have exclusive access to deep water. The lack of clear differences in maximum rooting depth between these two functional groups, however, has caused this model to fall out of favor. The alternative model, the demographic bottleneck hypothesis, suggests that trees and grasses occupy overlapping rooting niches, and that stochastic events such as fires and droughts result in episodic tree mortality at various life stages, thus preventing trees from otherwise displacing grasses, at least in mesic savannas. Two potential problems with this view are: 1) we lack data on functional rooting profiles in trees and grasses, and these profiles are not necessarily reflected by differences in maximum or physical rooting depth, and 2) subtle, difficult-to-detect differences in rooting profiles between the two functional groups may be sufficient to result in coexistence in many situations. To tackle this question, I coupled a plant uptake model with a soil moisture dynamics model to explore the environmental conditions under which functional rooting profiles with equal rooting depth but different depth distributions (i.e., shapes) can coexist when competing for water. I show that, as long as rainfall inputs are stochastic, coexistence based on rooting differences is viable under a wide range of conditions, even when these differences are subtle. The results also indicate that coexistence mechanisms based on rooting niche differentiation are more viable under some climatic and edaphic conditions than others. This suggests that the two-layer model is both viable and stochastic in nature, and that a full understanding of tree-grass coexistence and dynamics may require incorporating fine-scale rooting differences between these functional groups and realistic stochastic climate drivers into future models.

Characterization of essential oil distribution in the root cross-section of Valeriana officinalis L. s.l. by using histological imaging techniques.

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Penzkofer, Michael; Baron, Andrea; Naumann, Annette; Krähmer, Andrea; Schulz, Hartwig; Heuberger, Heidi

2018-01-01

The essential oil is an important compound of the root and rhizome of medicinally used valerian ( Valeriana officinalis L. s.l.), with a stated minimum content in the European pharmacopoeia. The essential oil is located in droplets, of which the position and distribution in the total root cross-section of different valerian varieties, root thicknesses and root horizons are determined in this study using an adapted fluorescence-microscopy and automatic imaging analysis method. The study was initiated by the following facts:A probable negative correlation between essential oil content and root thickness in selected single plants (elites), observed during the breeding of coarsely rooted valerian with high oil content.Higher essential oil content after careful hand-harvest and processing of the roots. In preliminary tests, the existence of oil containing droplets in the outer and inner regions of the valerian roots was confirmed by histological techniques and light-microscopy, as well as Fourier-transform infrared spectroscopy. Based on this, fluorescence-microscopy followed by image analysis of entire root cross-sections, showed that a large number of oil droplets (on average 43% of total oil droplets) are located close to the root surface. The remaining oil droplets are located in the inner regions (parenchyma) and showed varying density gradients from the inner to the outer regions depending on genotype, root thickness and harvesting depth. Fluorescence-microscopy is suitable to evaluate prevalence and distribution of essential oil droplets of valerian in entire root cross-sections. The oil droplet density gradient varies among genotypes. Genotypes with a linear rather than an exponential increase of oil droplet density from the inner to the outer parenchyma can be chosen for better stability during post-harvest processing. The negative correlation of essential oil content and root thickness as observed in our breeding material can be counteracted through a

Mapping of the spatial distribution of silver nanoparticles in root tissues of Vicia faba by laser-induced breakdown spectroscopy (LIBS).

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Krajcarová, L; Novotný, K; Kummerová, M; Dubová, J; Gloser, V; Kaiser, J

2017-10-01

The manuscript presents a procedure for optimal sample preparation and the mapping of the spatial distribution of metal ions and nanoparticles in plant roots using laser-induced breakdown spectroscopy (LIBS) in a double-pulse configuration (DP LIBS) in orthogonal reheating mode. Two Nd:YAG lasers were used; the first one was an ablation laser (UP-266 MACRO, New Wave, USA) with a wavelength of 266nm, and the second one (Brilliant, Quantel, France), with a fundamental wavelength of 1064nm, was used to reheat the microplasma. Seedlings of Vicia faba were cultivated for 7 days in CuSO 4 or AgNO 3 solutions with a concentration of 10µmoll -1 or in a solution of silver nanoparticles (AgNPs) with a concentration of 10µmoll -1 of total Ag, and in distilled water as a control. The total contents of the examined metals in the roots after sample mineralization as well as changes in the concentrations of the metals in the cultivation solutions were monitored by ICP-OES. Root samples embedded in the TissueTek medium and cut into 40µm thick cross sections using the Cryo-Cut Microtome proved to be best suited for an accurate LIBS analysis with a 50µm spatial resolution. 2D raster maps of elemental distribution were created for the emission lines of Cu(I) at 324.754nm and Ag(I) at 328.068nm. The limits of detection of DP LIBS for the root cross sections were estimated to be 4pg for Cu, 18pg for Ag, and 3pg for AgNPs. The results of Ag spatial distribution mapping indicated that unlike Ag + ions, AgNPs do not penetrate into the inner tissues of Vicia faba roots but stay in their outermost layers. The content of Ag in roots cultivated in the AgNP solution was one order of magnitude lower compared to roots cultivated in the metal ion solutions. The significantly smaller concentration of Ag in root tissues cultivated in the AgNP solution also supports the conclusion that the absorption and uptake of AgNPs by roots of Vicia faba is very slow. LIBS mapping of root sections

Amyloplast Distribution Directs a Root Gravitropic Reaction

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Kordyum, Elizabeth

Immobile higher plants are oriented in the gravitational field due to gravitropim that is a physiological growth reaction and consists of three phases: reception of a gravitational signal by statocytes, its transduction to the elongation zone, and finally the organ bending. As it is known, roots are characterized with positive gravitropism, i. e. they grow in the direction of a gravitational vector, stems - with negative gravitropism, i. e. they grow in the direction opposite to a gravitational vector. According to the Nemec’s and Haberlandt’s starch-statolith hypothesis, amyloplasts in diameter of 1.5 - 3 μ in average, which appear to act as gravity sensors and fulfill a statolythic function in the specialized graviperceptive cells - statocytes, sediment in the direction of a gravitational vector in the distal part of a cell, while a nucleus is in the proximal one. There are reasonable data that confirm the amyloplasts-statoliths participation in gravity perception: 1) correlation between the statoliths localization and the site of gravity sensing, 2) significant redistribution (sedimentation) of amyloplasts in statocytes under gravistimulation in comparison with other cell organelles, 3) root decreased ability to react on gravity under starch removal from amyloplasts, 4) starchless Arabidopsis thaliana mutants are agravitropic, 5) amyloplasts-statoliths do not sediment in the absence of the gravitational vector and are in different parts or more concentrated in the center of statocytes. Plant tropisms have been intensively studied for many decades and continue to be investigated. Nevertheless, the mechanisms by which plants do so is still not clearly explained and many questions on gravisensing and graviresponse remain unanswered. Even accepted hypotheses are now being questioned and recent data are critically evaluated. Although the available data show the Ca2+ and cytoskeleton participation in graviperception and signal transduction, the clear evidence

Linking carbon supply to root cell-wall chemistry and mechanics at high altitudes in Abies georgei

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Genet, Marie; Li, Mingcai; Luo, Tianxiang; Fourcaud, Thierry; Clément-Vidal, Anne; Stokes, Alexia

2011-01-01

Background and Aims The mobile carbon supply to different compartments of a tree is affected by climate, but its impact on cell-wall chemistry and mechanics remains unknown. To understand better the variability in root growth and biomechanics in mountain forests subjected to substrate mass movement, we investigated root chemical and mechanical properties of mature Abies georgei var. smithii (Smith fir) growing at different elevations on the Tibet–Qinghai Plateau. Methods Thin and fine roots (0·1–4·0 mm in diameter) were sampled at three different elevations (3480, 3900 and 4330 m, the last corresponding to the treeline). Tensile resistance of roots of different diameter classes was measured along with holocellulose and non-structural carbon (NSC) content. Key Results The mean force necessary to break roots in tension decreased significantly with increasing altitude and was attributed to a decrease in holocellulose content. Holocellulose was significantly lower in roots at the treeline (29·5 ± 1·3 %) compared with those at 3480 m (39·1 ± 1·0 %). Roots also differed significantly in NSC, with 35·6 ± 4·1 mg g−1 dry mass of mean total soluble sugars in roots at 3480 m and 18·8 ± 2·1 mg g−1 dry mass in roots at the treeline. Conclusions Root mechanical resistance, holocellulose and NSC content all decreased with increasing altitude. Holocellulose is made up principally of cellulose, the biosynthesis of which depends largely on NSC supply. Plants synthesize cellulose when conditions are optimal and NSC is not limiting. Thus, cellulose synthesis in the thin and fine roots measured in our study is probably not a priority in mature trees growing at very high altitudes, where climatic factors will be limiting for growth. Root NSC stocks at the treeline may be depleted through over-demand for carbon supply due to increased fine root production or winter root growth. PMID:21186240

Nucleolus disassembly and distribution of segregated nucleolar material in prophase of root-tip meristematic cells in Triticum aestivum L.

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Wang Jianyue

2015-01-01

Full Text Available This paper presents details of the process of nucleolar disassembly, studied by conventional transmission electron microscopy (TEM in wheat root cells. In early prophase, chromatin condensation and irregular nucleolar morphology are observed, with many small particles appearing around the nucleolus. In middle prophase, the nucleolus radiates outwards; in late prophase, the fine structure of the nucleolus disappears and nucleolar material diffuses away. Using “en bloc” silver-staining to distinguish between nucleoli and chromatin, we observed that the dispersed nucleolar material aggregates around the chromatin, forming a sheath-like perichromosomal structure that coats the chromosomes in late prophase.

Light as stress factor to plant roots - case of root halotropism.

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Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

2014-01-01

Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives.

Distribution spatiale intra-urbaine des particules fines : monitoring ...

African Journals Online (AJOL)

SARAH

30 sept. 2014 ... En outre, l'accumulation des particules fines est faible pendant un mois pluvieux par rapport à un mois sec ..... benjamina, et la structure (tige, branches) des arborées ... par Zhang et al., (2006) sur des feuilles de Pinus pumila.

Root systems of chaparral shrubs.

Science.gov (United States)

Kummerow, Jochen; Krause, David; Jow, William

1977-06-01

Root systems of chaparral shrubs were excavated from a 70 m 2 plot of a mixed chaparral stand located on a north-facing slope in San Diego County (32°54' N; 900 m above sea level). The main shrub species present were Adenostoma fasciculatum, Arctostaphylos pungens, Ceanothus greggii, Erigonum fasciculatum, and Haplopappus pinifolius. Shrubs were wired into their positions, and the soil was washed out beneath them down to a depth of approximately 60 cm, where impenetrable granite impeded further washing and root growth was severely restricted. Spacing and interweaving of root systems were recorded by an in-scale drawing. The roots were harvested in accordance to their depths, separated into diameter size classes for each species, and their dry weights measured. Roots of shrubs were largely confined to the upper soil levels. The roots of Eriogonum fasciculatum were concentrated in the upper soil layer. Roots of Adenostoma fasciculatum tended to be more superficial than those from Ceanothus greggii. It is hypothesized that the shallow soil at the excavation site impeded a clear depth zonation of the different root systems. The average dry weight root:shoot ratio was 0.6, ranging for the individual shrubs from 0.8 to 0.4. The root area always exceeded the shoot area, with the corresponding ratios ranging from 6 for Arctostaphylos pungens to 40 for Haplopappus pinifolius. The fine root density of 64 g dry weight per m 2 under the canopy was significantly higher than in the unshaded area. However, the corresponding value of 45 g dry weight per m 2 for the open ground is still high enough to make the establishment of other shrubs difficult.

Root exudation and root development of lettuce (Lactuca sativa L. cv. Tizian) as affected by different soils.

Science.gov (United States)

Neumann, G; Bott, S; Ohler, M A; Mock, H-P; Lippmann, R; Grosch, R; Smalla, K

2014-01-01

Development and activity of plant roots exhibit high adaptive variability. Although it is well-documented, that physicochemical soil properties can strongly influence root morphology and root exudation, particularly under field conditions, a comparative assessment is complicated by the impact of additional factors, such as climate and cropping history. To overcome these limitations, in this study, field soils originating from an unique experimental plot system with three different soil types, which were stored at the same field site for 10 years and exposed to the same agricultural management practice, were used for an investigation on effects of soil type on root development and root exudation. Lettuce (Lactuca sativa L. cv. Tizian) was grown as a model plant under controlled environmental conditions in a minirhizotrone system equipped with root observation windows (rhizoboxes). Root exudates were collected by placing sorption filters onto the root surface followed by subsequent extraction and GC-MS profiling of the trapped compounds. Surprisingly, even in absence of external stress factors with known impact on root exudation, such as pH extremes, water and nutrient limitations/toxicities or soil structure effects (use of sieved soils), root growth characteristics (root length, fine root development) as well as profiles of root exudates were strongly influenced by the soil type used for plant cultivation. The results coincided well with differences in rhizosphere bacterial communities, detected in field-grown lettuce plants cultivated on the same soils (Schreiter et al., this issue). The findings suggest that the observed differences may be the result of plant interactions with the soil-specific microbiomes.

Root exudation and root development of lettuce (Lactuca sativa L.cv. Tizian as affected by different soils

Directory of Open Access Journals (Sweden)

Günter eNeumann

2014-01-01

Full Text Available Development and activity of plant roots exhibits high adaptive variability. Although it is well-documented, that physicochemical soil properties can strongly influence root morphology and root exudation, particularly under field conditions, a comparative assessment is complicated by the impact of additional factors, such as climate and cropping history. To overcome these limitations, in this study, field soils originating from an unique experimental plot system with three different soil types, which were stored at the same field site for ten years and exposed to the same agricultural management practice, were used for an investigation on effects of soil type on root development and root exudation. Lettuce (Lactuca sativa L. cv. Tizian was used as a model plant, grown under controlled environmental conditions in a minirhizotrone system equipped with root observation windows (rhizoboxes. Root exudates were collected by placing sorption filters onto the root surface followed by subsequent extraction and GC-MS profiling of the trapped compounds. Surprisingly, even in absence of external stress factors with known impact on root exudation, such as pH extremes, water and nutrient limitations/toxicities or soil structure effects (use of sieved soils, root growth characteristics (root length, fine root development as well as profiles of root exudates were strongly influenced by the soil type used for plant cultivation. The results coincided well with differences in rhizosphere bacterial communities, detected in field-grown lettuce plants cultivated on the same soils (Schreiter et al., this issue. The findings suggest that the observed differences may be the result of plant interactions with the soil-specific microbiomes.

Root exudation and root development of lettuce (Lactuca sativa L. cv. Tizian) as affected by different soils

Science.gov (United States)

Neumann, G.; Bott, S.; Ohler, M. A.; Mock, H.-P.; Lippmann, R.; Grosch, R.; Smalla, K.

2014-01-01

Development and activity of plant roots exhibit high adaptive variability. Although it is well-documented, that physicochemical soil properties can strongly influence root morphology and root exudation, particularly under field conditions, a comparative assessment is complicated by the impact of additional factors, such as climate and cropping history. To overcome these limitations, in this study, field soils originating from an unique experimental plot system with three different soil types, which were stored at the same field site for 10 years and exposed to the same agricultural management practice, were used for an investigation on effects of soil type on root development and root exudation. Lettuce (Lactuca sativa L. cv. Tizian) was grown as a model plant under controlled environmental conditions in a minirhizotrone system equipped with root observation windows (rhizoboxes). Root exudates were collected by placing sorption filters onto the root surface followed by subsequent extraction and GC-MS profiling of the trapped compounds. Surprisingly, even in absence of external stress factors with known impact on root exudation, such as pH extremes, water and nutrient limitations/toxicities or soil structure effects (use of sieved soils), root growth characteristics (root length, fine root development) as well as profiles of root exudates were strongly influenced by the soil type used for plant cultivation. The results coincided well with differences in rhizosphere bacterial communities, detected in field-grown lettuce plants cultivated on the same soils (Schreiter et al., this issue). The findings suggest that the observed differences may be the result of plant interactions with the soil-specific microbiomes. PMID:24478764

Dro1, a major QTL involved in deep rooting of rice under upland field conditions.

Science.gov (United States)

Uga, Yusaku; Okuno, Kazutoshi; Yano, Masahiro

2011-05-01

Developing a deep root system is an important strategy for avoiding drought stress in rice. Using the 'basket' method, the ratio of deep rooting (RDR; the proportion of total roots that elongated through the basket bottom) was calculated to evaluate deep rooting. A new major quantitative trait locus (QTL) controlling RDR was detected on chromosome 9 by using 117 recombinant inbred lines (RILs) derived from a cross between the lowland cultivar IR64, with shallow rooting, and the upland cultivar Kinandang Patong (KP), with deep rooting. This QTL explained 66.6% of the total phenotypic variance in RDR in the RILs. A BC(2)F(3) line homozygous for the KP allele of the QTL had an RDR of 40.4%, compared with 2.6% for the homozygous IR64 allele. Fine mapping of this QTL was undertaken using eight BC(2)F(3) recombinant lines. The RDR QTL Dro1 (Deeper rooting 1) was mapped between the markers RM24393 and RM7424, which delimit a 608.4 kb interval in the reference cultivar Nipponbare. To clarify the influence of Dro1 in an upland field, the root distribution in different soil layers was quantified by means of core sampling. A line homozygous for the KP allele of Dro1 (Dro1-KP) and IR64 did not differ in root dry weight in the shallow soil layers (0-25 cm), but root dry weight of Dro1-KP in deep soil layers (25-50 cm) was significantly greater than that of IR64, suggesting that Dro1 plays a crucial role in increased deep rooting under upland field conditions.

Developmental distribution of the plasma membrane-enriched proteome in the maize primary root growth zone

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Zhe eZhang

2013-03-01

Full Text Available Within the growth zone of the maize primary root, there are well-defined patterns of spatial and temporal organization of cell division and elongation. However, the processes underlying this organization remain poorly understood. To gain additional insights into the differences amongst the defined regions, we performed a proteomic analysis focusing on fractions enriched for plasma membrane (PM proteins. The PM is the interface between the plant cell and the apoplast and/or extracellular space. As such, it is a key structure involved in the exchange of nutrients and other molecules as well as in the integration of signals that regulate growth and development. Despite the important functions of PM-localized proteins in mediating these processes, a full understanding of dynamic changes in PM proteomes is often impeded by low relative concentrations relative to total proteins. Using a relatively simple strategy of treating microsomal fractions with Brij-58 detergent to enrich for PM proteins, we compared the developmental distribution of proteins within the root growth zone which revealed a number of previously known as well as novel proteins with interesting patterns of abundance. For instance, the quantitative proteomic analysis detected a gradient of PM aquaporin proteins similar to that previously reported using immunoblot analyses, confirming the veracity of this strategy. Cellulose synthases increased in abundance with increasing distance from the root apex, consistent with expected locations of cell wall deposition. The similar distribution pattern for Brittle-stalk-2-like protein 3 implicate that this protein may also have cell wall related functions. These results show that the simplified PM enrichment method previously demonstrated in Arabidopsis can be successfully applied to completely unrelated plant tissues and provide insights into differences in the PM proteome throughout growth and development zones of the maize primary root.

Developmental distribution of the plasma membrane-enriched proteome in the maize primary root growth zone.

Science.gov (United States)

Zhang, Zhe; Voothuluru, Priyamvada; Yamaguchi, Mineo; Sharp, Robert E; Peck, Scott C

2013-01-01

Within the growth zone of the maize primary root, there are well-defined patterns of spatial and temporal organization of cell division and elongation. However, the processes underlying this organization remain poorly understood. To gain additional insights into the differences amongst the defined regions, we performed a proteomic analysis focusing on fractions enriched for plasma membrane (PM) proteins. The PM is the interface between the plant cell and the apoplast and/or extracellular space. As such, it is a key structure involved in the exchange of nutrients and other molecules as well as in the integration of signals that regulate growth and development. Despite the important functions of PM-localized proteins in mediating these processes, a full understanding of dynamic changes in PM proteomes is often impeded by low relative concentrations relative to total proteins. Using a relatively simple strategy of treating microsomal fractions with Brij-58 detergent to enrich for PM proteins, we compared the developmental distribution of proteins within the root growth zone which revealed a number of previously known as well as novel proteins with interesting patterns of abundance. For instance, the quantitative proteomic analysis detected a gradient of PM aquaporin proteins similar to that previously reported using immunoblot analyses, confirming the veracity of this strategy. Cellulose synthases increased in abundance with increasing distance from the root apex, consistent with expected locations of cell wall deposition. The similar distribution pattern for Brittle-stalk-2-like protein implicates that this protein may also have cell wall related functions. These results show that the simplified PM enrichment method previously demonstrated in Arabidopsis can be successfully applied to completely unrelated plant tissues and provide insights into differences in the PM proteome throughout growth and development zones of the maize primary root.

A heterogeneous boron distribution in soil influences the poplar root system architecture development

Science.gov (United States)

Rees, R.; Robinson, B. H.; Hartmann, S.; Lehmann, E.; Schulin, R.

2009-04-01

Poplars are well suited for the phytomanagement of boron (B)-contaminated sites, due to their high transpiration rate and tolerance to elevated soil B concentrations. However, the uptake and the fate of B in poplar stands are not well understood. This information is crucial to improve the design of phytomanagement systems, where the primary role of poplars is to reduce B leaching by reducing the water flux through the contaminated material. Like other trace elements, B occurs heterogeneously in soils. Concentrations can differ up to an order of magnitude within centimetres. These gradients affect plant root growth and thus via preferential flow along the roots water and mass transport in soils to ground and surface waters. Generally there are three possible reactions of plant roots to patches with elevated trace element concentrations in soils: indifference, avoidance, or foraging. While avoidance or indifference might seem to be the most obvious strategies, foraging cannot be excluded a priori, because of the high demand of poplars for B compared to other tree species. We aimed to determine the rooting strategies of poplars in soils where B is either homo- or heterogeneously distributed. We planted 5 cm cuttings of Populus tremula var. Birmensdorf clones in aluminum (Al) containers with internal dimensions of 64 x 67 x 1.2 cm. The soil used was subsoil from northern Switzerland with a naturally low B and organic C concentration. We setup two treatments and a control with three replicates each. We spiked a bigger and a smaller portion of the soil with the same amount of B(OH)3-salt, in order to obtain soil concentrations of 7.5 mg B kg-1 and 20 mg B kg-1. We filled the containers with (a) un-spiked soil, (b) the 7.5 mg B kg-1 soil and (c) heterogeneously. The heterogeneous treatment consisted of one third 20 mg B kg-1 soil and two thirds control soil. We grew the poplars in a small greenhouse over 2 months and from then on in a climate chamber for another 3 months

Quantitative Classification of Rice (Oryza sativa L.) Root Length and Diameter Using Image Analysis.

Science.gov (United States)

Gu, Dongxiang; Zhen, Fengxian; Hannaway, David B; Zhu, Yan; Liu, Leilei; Cao, Weixing; Tang, Liang

2017-01-01

Quantitative study of root morphological characteristics of plants is helpful for understanding the relationships between their morphology and function. However, few studies and little detailed and accurate information of root characteristics were reported in fine-rooted plants like rice (Oryza sativa L.). The aims of this study were to quantitatively classify fine lateral roots (FLRs), thick lateral roots (TLRs), and nodal roots (NRs) and analyze their dynamics of mean diameter (MD), lengths and surface area percentage with growth stages in rice plant. Pot experiments were carried out during three years with three rice cultivars, three nitrogen (N) rates and three water regimes. In cultivar experiment, among the three cultivars, root length of 'Yangdao 6' was longest, while the MD of its FLR was the smallest, and the mean diameters for TLR and NR were the largest, the surface area percentage (SAP) of TLRs (SAPT) was the highest, indicating that Yangdao 6 has better nitrogen and water uptake ability. High N rate increased the length of different types of roots and increased the MD of lateral roots, decreased the SAP of FLRs (SAPF) and TLRs, but increased the SAP of NRs (SAPN). Moderate decrease of water supply increased root length and diameter, water stress increased the SAPF and SAPT, but decreased SAPN. The quantitative results indicate that rice plant tends to increase lateral roots to get more surface area for nitrogen and water uptake when available assimilates are limiting under nitrogen and water stress environments.

Size distribution of chemical elements and their source apportionment in ambient coarse, fine, and ultrafine particles in Shanghai urban summer atmosphere.

Science.gov (United States)

Lü, Senlin; Zhang, Rui; Yao, Zhenkun; Yi, Fei; Ren, Jingjing; Wu, Minghong; Feng, Man; Wang, Qingyue

2012-01-01

Ambient coarse particles (diameter 1.8-10 microm), fine particles (diameter 0.1-1.8 microm), and ultrafine particles (diameter Source apportionment of the chemical elements was analyzed by means of an enrichment factor method. Our results showed that the average mass concentrations of coarse particles, fine particles and ultrafine particles in the summer air were 9.38 +/- 2.18, 8.82 +/- 3.52, and 2.02 +/- 0.41 microg/m3, respectively. The mass percentage of the fine particles accounted for 51.47% in the total mass of PM10, indicating that fine particles are the major component in the Shanghai ambient particles. SEM/EDX results showed that the coarse particles were dominated by minerals, fine particles by soot aggregates and fly ashes, and ultrafine particles by soot particles and unidentified particles. SRXRF results demonstrated that crustal elements were mainly distributed in the coarse particles, while heavy metals were in higher proportions in the fine particles. Source apportionment revealed that Si, K, Ca, Fe, Mn, Rb, and Sr were from crustal sources, and S, Cl, Cu, Zn, As, Se, Br, and Pb from anthropogenic sources. Levels of P, V, Cr, and Ni in particles might be contributed from multi-sources, and need further investigation.

Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

Science.gov (United States)

Macedo, Renan; Sales, Lilian Patrícia; Yoshida, Fernanda; Silva-Abud, Lidianne Lemes; Lobo, Murillo

2017-01-01

Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%). Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070) was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

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Renan Macedo

Full Text Available Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%. Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070 was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

An evaluation of inexpensive methods for root image acquisition when using rhizotrons.

Science.gov (United States)

Mohamed, Awaz; Monnier, Yogan; Mao, Zhun; Lobet, Guillaume; Maeght, Jean-Luc; Ramel, Merlin; Stokes, Alexia

2017-01-01

Belowground processes play an essential role in ecosystem nutrient cycling and the global carbon budget cycle. Quantifying fine root growth is crucial to the understanding of ecosystem structure and function and in predicting how ecosystems respond to climate variability. A better understanding of root system growth is necessary, but choosing the best method of observation is complex, especially in the natural soil environment. Here, we compare five methods of root image acquisition using inexpensive technology that is currently available on the market: flatbed scanner, handheld scanner, manual tracing, a smartphone application scanner and a time-lapse camera. Using the five methods, root elongation rate (RER) was measured for three months, on roots of hybrid walnut ( Juglans nigra  ×  Juglans regia L.) in rhizotrons installed in agroforests. When all methods were compared together, there were no significant differences in relative cumulative root length. However, the time-lapse camera and the manual tracing method significantly overestimated the relative mean diameter of roots compared to the three scanning methods. The smartphone scanning application was found to perform best overall when considering image quality and ease of use in the field. The automatic time-lapse camera was useful for measuring RER over several months without any human intervention. Our results show that inexpensive scanning and automated methods provide correct measurements of root elongation and length (but not diameter when using the time-lapse camera). These methods are capable of detecting fine roots to a diameter of 0.1 mm and can therefore be selected by the user depending on the data required.

Interactions between shoots and roots of two soy bean varieties at different phosphate nutritional level: Distribution of 14C-assimilates and carbohydrate status

International Nuclear Information System (INIS)

Burauel, P.

1987-11-01

The influence of the phosphate nutritional status on assimilate distribution between shoot and root was studied for two soya bean varieties (Century and Woodworth). Plants at a full nutritional level (+P variants) and those in a condition of moderate P stress (-P variants) were considered. Particular attention was paid to the following aspect: Is a modification of the assimilate distribution, conditioned by phosphate withdrawal, only associated with the reduction in the shoot/root ratio or do changes in distribution already occur before morphological parameters are influenced? Further it is known from literature that after a contemporary interruption of the phoshate supply plants display an increased phosphate uptake rate when the supply is restored in comparison to plants nourished normally. In this respect the following aspects were of interest: Does an increased uptake rate, for which sufficient energy must be made available, have a direct effect on the transport of assimilates to the root? Is the carbohydrate content of the roots possibly a parameter with which the difference in efficiency of the two varieties may be described? (orig./MG) [de

Experimentally reduced root-microbe interactions reveal limited plasticity in functional root traits in Acer and Quercus.

Science.gov (United States)

Lee, Mei-Ho; Comas, Louise H; Callahan, Hilary S

2014-02-01

Interactions between roots and soil microbes are critical components of below-ground ecology. It is essential to quantify the magnitude of root trait variation both among and within species, including variation due to plasticity. In addition to contextualizing the magnitude of plasticity relative to differences between species, studies of plasticity can ascertain if plasticity is predictable and whether an environmental factor elicits changes in traits that are functionally advantageous. To compare functional traits and trait plasticities in fine root tissues with natural and reduced levels of colonization by microbial symbionts, trimmed and surface-sterilized root segments of 2-year-old Acer rubrum and Quercus rubra seedlings were manipulated. Segments were then replanted into satellite pots filled with control or heat-treated soil, both originally derived from a natural forest. Mycorrhizal colonization was near zero in roots grown in heat-treated soil; roots grown in control soil matched the higher colonization levels observed in unmanipulated root samples collected from field locations. Between-treatment comparisons revealed negligible plasticity for root diameter, branching intensity and nitrogen concentration across both species. Roots from treated soils had decreased tissue density (approx. 10-20 %) and increased specific root length (approx. 10-30 %). In contrast, species differences were significant and greater than treatment effects in traits other than tissue density. Interspecific trait differences were also significant in field samples, which generally resembled greenhouse samples. The combination of experimental and field approaches was useful for contextualizing trait plasticity in comparison with inter- and intra-specific trait variation. Findings that root traits are largely species dependent, with the exception of root tissue density, are discussed in the context of current literature on root trait variation, interactions with symbionts and recent

Patterns of nocturnal rehydration in root tissues of Vaccinium corymbosum L. under severe drought conditions.

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Valenzuela-Estrada, Luis R; Richards, James H; Diaz, Andres; Eissensat, David M

2009-01-01

Although roots in dry soil layers are commonly rehydrated by internal hydraulic redistribution during the nocturnal period, patterns of tissue rehydration are poorly understood. Rates of nocturnal rehydration were examined in roots of different orders in Vaccinium corymbosum L. 'Bluecrop' (Northern highbush blueberry) grown in a split-pot system with one set of roots in relatively moist soil and the other set of roots in dry soil. Vaccinium is noted for a highly branched and extremely fine root system. It is hypothesized that nocturnal root tissue rehydration would be slow, especially in the distal root orders because of their greater hydraulic constraints (smaller vessel diameters and fewer number of vessels). Vaccinium root hydraulic properties delayed internal water movement. Even when water was readily available to roots in the wet soil and transpiration was minimal, it took a whole night-time period of 12 h for the distal finest roots (1st to 4th order) under dry soil conditions to reach the same water potentials as fine roots in moist soil (1st to 4th order). Even though roots under dry soil equilibrated with roots in moist soil, the equilibrium point reached before sunrise was about -1.2 MPa, indicating that tissues were not fully rehydrated. Using a single-branch root model, it was estimated that individual roots exhibiting the lowest water potentials in dry soil were 1st order roots (distal finest roots of the root system). However, considered at the branch level, root orders with the highest hydraulic resistances corresponded to the lowest orders of the permanent root system (3rd-, 4th-, and 5th-order roots), thus indicating possible locations of hydraulic safety control in the root system of this species.

Light as stress factor to plant roots – case of root halotropism

Science.gov (United States)

Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

2014-01-01

Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives. PMID:25566292

Developing a method of fabricating microchannels using plant root structure

Science.gov (United States)

Nakashima, Shota; Tokumaru, Kazuki; Tsumori, Fujio

2018-06-01

Complicated three-dimensional (3D) microchannels are expected to be applied to a lab-on-a-chip, especially an organ-on-a-chip. There are fine microchannel networks such as blood vessels in a living organ. However, it is difficult to recreate the complicated 3D microchannels of real living structures. Plant roots have a similar structure to blood vessels. They spread radially and three-dimensionally, and become thinner as they branch. In this research, we propose a method of fabricating microchannels using a live plant root as a template to mimic a blood vessel structure. We grew a plant in ceramic slurry instead of soil. The slurry consists of ceramic powder, binder and water, so it plays a similar role to soil consisting of fine particles in water. After growing the plant, the roots inside the slurry were burned and a sintered ceramic body with channel structures was obtained by heating. We used two types of slurry with different composition ratios, and compared the internal channel structures before and after sintering.

Distribution of inert gases in fines from the Cayley-Descartes region

Science.gov (United States)

Walton, J. R.; Lakatos, S.; Heymann, D.

1973-01-01

The inert gases in 14 different fines and in one sample of 2 to 4 mm fines from Apollo 16 were measured by mass spectroscopy with respect to trapped solar wind gases, cosmogenic gases, and 'parentless' Ar-40. Such studies are helpful for the understanding of regolith evolution, of transport of regolith fines, and of the lunar atmosphere. The Apollo 16 soils are unique because they represent, after Luna 20, the second and much more extensive record from the lunar highlands. The landing site presents the problem of materials from the Cayley Formation vs those from the Descartes Formation. There are two large, relatively fresh craters in the area, North Ray and South Ray, whose ejecta patterns may be recognized in the inert-gas record.

Quantitative Classification of Rice (Oryza sativa L.) Root Length and Diameter Using Image Analysis

Science.gov (United States)

Gu, Dongxiang; Zhen, Fengxian; Hannaway, David B.; Zhu, Yan; Liu, Leilei; Cao, Weixing; Tang, Liang

2017-01-01

Quantitative study of root morphological characteristics of plants is helpful for understanding the relationships between their morphology and function. However, few studies and little detailed and accurate information of root characteristics were reported in fine-rooted plants like rice (Oryza sativa L.). The aims of this study were to quantitatively classify fine lateral roots (FLRs), thick lateral roots (TLRs), and nodal roots (NRs) and analyze their dynamics of mean diameter (MD), lengths and surface area percentage with growth stages in rice plant. Pot experiments were carried out during three years with three rice cultivars, three nitrogen (N) rates and three water regimes. In cultivar experiment, among the three cultivars, root length of ‘Yangdao 6’ was longest, while the MD of its FLR was the smallest, and the mean diameters for TLR and NR were the largest, the surface area percentage (SAP) of TLRs (SAPT) was the highest, indicating that Yangdao 6 has better nitrogen and water uptake ability. High N rate increased the length of different types of roots and increased the MD of lateral roots, decreased the SAP of FLRs (SAPF) and TLRs, but increased the SAP of NRs (SAPN). Moderate decrease of water supply increased root length and diameter, water stress increased the SAPF and SAPT, but decreased SAPN. The quantitative results indicate that rice plant tends to increase lateral roots to get more surface area for nitrogen and water uptake when available assimilates are limiting under nitrogen and water stress environments. PMID:28103264

Spatial and temporal distribution of root activity of Ramphal (Annona reticulata) seedlings and their grafts with 'Arka Sahan' scion determined using isotopic technique

International Nuclear Information System (INIS)

Kotur, S.C.

2009-01-01

In both seedlings and grafts of Ramphal, early rainy season showed the highest intensity of root activity followed by late rainy season and winter. During early rainy season, the active roots were predominantly surface oriented and clustered towards the trunk in both seedlings and grafts. During later seasons, however, the roots migrated from 20cm to 40cm depth and from 40cm to 80 and 120cm radial distance that resulted in a uniform distribution of active roots throughout the rooting volume. The grafts of 'Arka Sahan' scion on Ramphal rootstocks showed deeper root activity which had nearly one-half of active roots close to the trunk at 40cm distance, that may be more drought tolerant than the seedlings. (author)

Effect of organic matter and roots in soil respiration in a Mediterranean riparian areas in Central Spain

Science.gov (United States)

Gonzalez-Garrido, Laura; Delgado, Juan Antonio; Martinez, Teodora

2010-05-01

Soil respiration is one of the largest carbon flux components within terrestrial ecosystems, and small changes in the magnitude of soil respiration could have a large effect on the concentration of CO2 in the atmosphere. The main objective is evaluating the factors controlling soil respiration on the global carbon cycle in riparian areas of Henares River. We evaluated total soil respiration as it was affected by soil temperature, soil moisture, root respiration and organic matter in four areas differing in vegetation cover. We specifically assessed the contribution of soil organic matter and fine root biomass (≤1 mm.) in soil carbon dioxide flux. The study area is located on the riverbanks of Henares River where it passes through the municipal term of Alcala de Henares (Madrid) in Central Spain. Measurements were performed in spring and autumn of 2009. The study was conducted on four different types of riparian vegetation: natural Mediterranean riparian forest, reforestation of 1994, reforestation of 1999 and riparian grassland without trees. In each area of study 3, 25x25 m, plots were delimited and within each plot three sampling units of 50x50 cm were selected at random. The temperature of the ground was taken during the measures from respiration using a Multi-thermometer (-50°C - +300°C) at 5 cm depth. The moisture content of the ground was measured at 5 cm of depth with a HH2 Moisture meter (Delta Devices, Cambridge, UK). The measures of respiration of the ground were realised in field by means of LCI portable (LC pro ADC Bioscientific, Ltd. UK) connected to a ground respiration camera. We introduced the camera 3 cm into the soil just after eliminating the vegetation grass of the surface of measurement cutting carefully the aerial part, without damaging the roots. Soil CO2 flux measurements were registered after stabilization. Immediately after CO2 measurements, we obtained soil samples by means of a drill of 2.18 cm of diameter taking samples to 10 cm and

Complementarity in nutrient foraging strategies of absorptive fine roots and arbuscular mycorrhizal fungi across 14 coexisting subtropical tree species.

Science.gov (United States)

Liu, Bitao; Li, Hongbo; Zhu, Biao; Koide, Roger T; Eissenstat, David M; Guo, Dali

2015-10-01

In most cases, both roots and mycorrhizal fungi are needed for plant nutrient foraging. Frequently, the colonization of roots by arbuscular mycorrhizal (AM) fungi seems to be greater in species with thick and sparsely branched roots than in species with thin and densely branched roots. Yet, whether a complementarity exists between roots and mycorrhizal fungi across these two types of root system remains unclear. We measured traits related to nutrient foraging (root morphology, architecture and proliferation, AM colonization and extramatrical hyphal length) across 14 coexisting AM subtropical tree species following root pruning and nutrient addition treatments. After root pruning, species with thinner roots showed more root growth, but lower mycorrhizal colonization, than species with thicker roots. Under multi-nutrient (NPK) addition, root growth increased, but mycorrhizal colonization decreased significantly, whereas no significant changes were found under nitrogen or phosphate additions. Moreover, root length proliferation was mainly achieved by altering root architecture, but not root morphology. Thin-root species seem to forage nutrients mainly via roots, whereas thick-root species rely more on mycorrhizal fungi. In addition, the reliance on mycorrhizal fungi was reduced by nutrient additions across all species. These findings highlight complementary strategies for nutrient foraging across coexisting species with contrasting root traits. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Overestimation of Crop Root Biomass in Field Experiments Due to Extraneous Organic Matter.

Science.gov (United States)

Hirte, Juliane; Leifeld, Jens; Abiven, Samuel; Oberholzer, Hans-Rudolf; Hammelehle, Andreas; Mayer, Jochen

2017-01-01

Root biomass is one of the most relevant root parameters for studies of plant response to environmental change, soil carbon modeling or estimations of soil carbon sequestration. A major source of error in root biomass quantification of agricultural crops in the field is the presence of extraneous organic matter in soil: dead roots from previous crops, weed roots, incorporated above ground plant residues and organic soil amendments, or remnants of soil fauna. Using the isotopic difference between recent maize root biomass and predominantly C3-derived extraneous organic matter, we determined the proportions of maize root biomass carbon of total carbon in root samples from the Swiss long-term field trial "DOK." We additionally evaluated the effects of agricultural management (bio-organic and conventional), sampling depth (0-0.25, 0.25-0.5, 0.5-0.75 m) and position (within and between maize rows), and root size class (coarse and fine roots) as defined by sieve mesh size (2 and 0.5 mm) on those proportions, and quantified the success rate of manual exclusion of extraneous organic matter from root samples. Only 60% of the root mass that we retrieved from field soil cores was actual maize root biomass from the current season. While the proportions of maize root biomass carbon were not affected by agricultural management, they increased consistently with soil depth, were higher within than between maize rows, and were higher in coarse (>2 mm) than in fine (≤2 and >0.5) root samples. The success rate of manual exclusion of extraneous organic matter from root samples was related to agricultural management and, at best, about 60%. We assume that the composition of extraneous organic matter is strongly influenced by agricultural management and soil depth and governs the effect size of the investigated factors. Extraneous organic matter may result in severe overestimation of recovered root biomass and has, therefore, large implications for soil carbon modeling and estimations

Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest.

Science.gov (United States)

Barberán, Albert; McGuire, Krista L; Wolf, Jeffrey A; Jones, F Andrew; Wright, Stuart Joseph; Turner, Benjamin L; Essene, Adam; Hubbell, Stephen P; Faircloth, Brant C; Fierer, Noah

2015-12-01

The complexities of the relationships between plant and soil microbial communities remain unresolved. We determined the associations between plant aboveground and belowground (root) distributions and the communities of soil fungi and bacteria found across a diverse tropical forest plot. Soil microbial community composition was correlated with the taxonomic and phylogenetic structure of the aboveground plant assemblages even after controlling for differences in soil characteristics, but these relationships were stronger for fungi than for bacteria. In contrast to expectations, the species composition of roots in our soil core samples was a poor predictor of microbial community composition perhaps due to the patchy, ephemeral, and highly overlapping nature of fine root distributions. Our ability to predict soil microbial composition was not improved by incorporating information on plant functional traits suggesting that the most commonly measured plant traits are not particularly useful for predicting the plot-level variability in belowground microbial communities. © 2015 John Wiley & Sons Ltd/CNRS.

Vertical distribution of the root system of linseed (Linum usitatissimum L. and legumes in pure and mixed sowing

Directory of Open Access Journals (Sweden)

Agnieszka Klimek-Kopyra

2015-03-01

Full Text Available Root competition for below-ground resources between edible plants may provide for long-term sustainability of agriculture systems. Intercropping can be more productive than a pure crop due to taking advantage of the morphological differences between species. In pure cropping, all biophysical interactions between plants occur through soil conditions. In intercropping, competition for water and nutrients is of major importance, but if the roots of one species occupy the zone just underneath the roots of the other crop, they can better use the resources of the root zone of the crop. The root system demonstrates a high degree of plasticity in its development in response to local heterogeneity of the soil profile and plant density. This study aimed at determining: (i the morphological characteristics of the root systems of linseed, pea and vetch depending on the method of sowing; (ii the root distribution in various soil types and at different soil profile depths (0–15 cm, 15–30 cm. Two three-year field experiments were conducted on two soil types in south Poland: soil A – Luvic Phaeozem (s1 and soil B – Eutric Cambisol (s2. These results show that linseed was more aggressive toward both legumes in mixture, but it produced lower yield compared to pure cropping. The environmental stress of plants in mixtures increased the relative weight of roots, which resulted in decreasing the root-shoot ratio (RSR.

Root distribution pattern and nitrogen uptake of some wheat and triticale germplasms in relation to rates and methods of nitrogen application

International Nuclear Information System (INIS)

Meena, N.L.; Seth, Jagdish

1975-01-01

A field experiment was conducted under irrigated conditions with four germplasms viz. Triticale(70-2), and wheat varieties HD 4502(durum), Kalyan Sona and Moti (aestivums) at the Indian Agricultural Research Institute Farm, New Delhi, during rabi season of 1972-73. The treatments comprised of three rates of nitrogen viz. 0,60 and 120 kg/ha and two methods of nitrogen application viz. (1) soil + foliar and (2) soil. The root distribution of the four germplasms, studied by 32 P injection technique was increased both vertically and horizontally with the addition of nitrogen. Root distribution of triticale was observed to be deep and spreading in habit, while durum proved to be shallow rooted and compact in nature. The total uptake of nitrogen was significantly increased with higher rates of nitrogen in all the germplasms. The maximum uptake of nitrogen was observed in the durum wheat. (author)

Composite Cucurbita pepo plants with transgenic roots as a tool to study root development.

Science.gov (United States)

Ilina, Elena L; Logachov, Anton A; Laplaze, Laurent; Demchenko, Nikolay P; Pawlowski, Katharina; Demchenko, Kirill N

2012-07-01

In most plant species, initiation of lateral root primordia occurs above the elongation zone. However, in cucurbits and some other species, lateral root primordia initiation and development takes place in the apical meristem of the parental root. Composite transgenic plants obtained by Agrobacterium rhizogenes-mediated transformation are known as a suitable model to study root development. The aim of the present study was to establish this transformation technique for squash. The auxin-responsive promoter DR5 was cloned into the binary vectors pKGW-RR-MGW and pMDC162-GFP. Incorporation of 5-ethynyl-2'-deoxyuridine (EdU) was used to evaluate the presence of DNA-synthesizing cells in the hypocotyl of squash seedlings to find out whether they were suitable for infection. Two A. rhizogenes strains, R1000 and MSU440, were used. Roots containing the respective constructs were selected based on DsRED1 or green fluorescent protein (GFP) fluorescence, and DR5::Egfp-gusA or DR5::gusA insertion, respectively, was verified by PCR. Distribution of the response to auxin was visualized by GFP fluorescence or β-glucuronidase (GUS) activity staining and confirmed by immunolocalization of GFP and GUS proteins, respectively. Based on the distribution of EdU-labelled cells, it was determined that 6-day-old squash seedlings were suited for inoculation by A. rhizogenes since their root pericycle and the adjacent layers contain enough proliferating cells. Agrobacterium rhizogenes R1000 proved to be the most virulent strain on squash seedlings. Squash roots containing the respective constructs did not exhibit the hairy root phenotype and were morphologically and structurally similar to wild-type roots. The auxin response pattern in the root apex of squash resembled that in arabidopsis roots. Composite squash plants obtained by A. rhizogenes-mediated transformation are a good tool for the investigation of root apical meristem development and root branching.

Farms, pastures and woodlands: the fine-scale distribution of Palearctic Culicoides spp. biting midges along an agro-ecological gradient.

Science.gov (United States)

Rigot, T; Drubbel, M Vercauteren; Delécolle, J-C; Gilbert, M

2013-03-01

The spatial epidemiology of Bluetongue virus (BTV) at the landscape level relates to the fine-scale distribution and dispersal capacities of its vectors, midges belonging to the genus Culicoides Latreille (Diptera: Ceratopogonidae). Although many previous researches have carried out Culicoides sampling on farms, little is known of the fine-scale distribution of Culicoides in the landscape immediately surrounding farms. The aim of this study was to gain a better understanding of Culicoides populations at increasing distances from typical dairy farms in north-west Europe, through the use of eight Onderstepoort-type black-light traps positioned along linear transects departing from farms, going through pastures and entering woodlands. A total of 16 902 Culicoides were collected in autumn 2008 and spring 2009. The majority were females, of which more than 97% were recognized as potential vectors. In pastures, we found decreasing numbers of female Culicoides as a function of the distance to the farm. This pattern was modelled by leptokurtic models, with parameters depending on season and species. By contrast, the low number of male Culicoides caught were homogeneously distributed along the transects. When transects entered woodlands, we found a higher abundance of Culicoides than expected considering the distance of the sampling sites to the farm, although this varied according to species. © 2012 The Authors. Medical and Veterinary Entomology © 2012 The Royal Entomological Society.

Oxygen penetration around burrows and roots in aquatic sediments

DEFF Research Database (Denmark)

Meysman, Filip J.R.; Galaktionov, O.S.; Glud, Ronnie N.

2010-01-01

Diffusion is the dominant physical mechanism for the transfer of oxygen into fine-grained aquatic sediments. This diffusive uptake occurs at the sediment-water interface, but also at internal interfaces, such as along ventilated burrows or O2 releasing plant roots. Here, we present a systematic...

Disproportionate abundance between ectomycorrhizal root tips and their associated mycelia

DEFF Research Database (Denmark)

Kjøller, Rasmus

2006-01-01

Extensive knowledge of various ectomycorrhizal fungal communities has been obtained over the past 10 years based on molecular identification of the fungi colonizing fine roots. In contrast, only limited information exists about the species composition of ectomycorrhizal hyphae in soil. This study...

Root colonization and spore abundance of arbuscular mycorrhizal fungi in distinct successional stages from an Atlantic rainforest biome in southern Brazil.

Science.gov (United States)

Zangaro, Waldemar; Rostirola, Leila Vergal; de Souza, Priscila Bochi; de Almeida Alves, Ricardo; Lescano, Luiz Eduardo Azevedo Marques; Rondina, Artur Berbel Lírio; Nogueira, Marco Antonio; Carrenho, Rosilaine

2013-04-01

The influence of plant functional groups and moderate seasonality on arbuscular mycorrhizal (AM) fungal status (root colonization and spore density) was investigated during 13 consecutive months in a chronosequence of succession in southern Brazil, consisting of grassland field, scrub vegetation, secondary forest and mature forest, in a region of transition from tropical to subtropical zones. AM root colonization and spore density decreased with advancing succession and were highest in early successional sites with grassland and scrub vegetation, intermediary in the secondary forest and lowest in the mature forest. They were little influenced by soil properties, but were sufficiently influenced by the fine root nutrient status and fine root traits among different functional plant groups. AM root colonization and spore density were higher during the favourable plant growth season (spring and summer) than during the less favourable plant growth season (autumn and winter). Spore density displayed significant seasonal variation at all sites, whilst root colonization displayed significant seasonal variation in grassland, scrub and secondary forest, but not in mature forest. The data suggest that (1) different plant functional groups display different relationships with AM fungi, influencing their abundance differentially; (2) plant species from early successional phases are more susceptible to AM root colonization and maintain higher AM sporulation than late successional species; (3) fine root traits and nutrient status influence these AM fungal attributes; and (4) higher AM spore production and root colonization is associated with the season of higher light incidence and temperature, abundant water in soil and higher plant metabolic activity.

Root characteristics of cover crops and their erosion-reducing potential during concentrated runoff

Science.gov (United States)

de Baets, S.; Poesen, J.

2009-04-01

In the loam region in central Belgium, a lot of research has been conducted on the effects of cover crops for preventing splash and interrill erosion and on their nutrient pumping effectiveness. As this is a very effective erosion and environment conservation technique, planting cover crops during the winter season is widely applied in the loess belt. Most of these cover crops freeze at the beginning of the winter period. Consequently, the above-ground biomass becomes less effective in protecting the soil from water erosion. Apart from the effects of the above-ground biomass in protecting the soil against raindrop impacts and reducing flow velocities by the retarding effects of their stems, plant roots also play an important role in improving soil strength. Previous research showed that roots contribute to a large extent to the resistance of topsoils against concentrated flow erosion. Unfortunately, information on root properties of common cover crops (e.g. Sinapis alba, Phacelia tanacetifoli, Lolium perenne, Avena sativa, Secale cereale, Raphanus sativus subsp. oleiferus) is very scarce. Therefore, root density distribution with depth and their erosion-reducing effects during concentrated flow erosion were assessed by conducting root auger measurements and concentrated flow experiments at the end of the growth period (December). The preliminary results indicate that the studied cover crops are not equally effective in preventing soil loss by concentrated flow erosion at the end of the growing season. Cover crops with thick roots, such as Sinapis alba and Raphanus sativus subsp. oleiferus are less effective than cover crops with fine-branched roots such as Phacelia tanacetifoli, Lolium perenne (Ryegrass), Avena sativa (Oats) and Secale cereale (Rye) in preventing soil losses by concentrated flow erosion. These results enable soil managers to select the most suitable crops and maximize soil protection.

Demonstrating the Uneven Importance of Fine-Scale Forest Structure on Snow Distributions using High Resolution Modeling

Science.gov (United States)

Broxton, P. D.; Harpold, A. A.; van Leeuwen, W.; Biederman, J. A.

2016-12-01

Quantifying the amount of snow in forested mountainous environments, as well as how it may change due to warming and forest disturbance, is critical given its importance for water supply and ecosystem health. Forest canopies affect snow accumulation and ablation in ways that are difficult to observe and model. Furthermore, fine-scale forest structure can accentuate or diminish the effects of forest-snow interactions. Despite decades of research demonstrating the importance of fine-scale forest structure (e.g. canopy edges and gaps) on snow, we still lack a comprehensive understanding of where and when forest structure has the largest impact on snowpack mass and energy budgets. Here, we use a hyper-resolution (1 meter spatial resolution) mass and energy balance snow model called the Snow Physics and Laser Mapping (SnowPALM) model along with LIDAR-derived forest structure to determine where spatial variability of fine-scale forest structure has the largest influence on large scale mass and energy budgets. SnowPALM was set up and calibrated at sites representing diverse climates in New Mexico, Arizona, and California. Then, we compared simulations at different model resolutions (i.e. 1, 10, and 100 m) to elucidate the effects of including versus not including information about fine scale canopy structure. These experiments were repeated for different prescribed topographies (i.e. flat, 30% slope north, and south-facing) at each site. Higher resolution simulations had more snow at lower canopy cover, with the opposite being true at high canopy cover. Furthermore, there is considerable scatter, indicating that different canopy arrangements can lead to different amounts of snow, even when the overall canopy coverage is the same. This modeling is contributing to the development of a high resolution machine learning algorithm called the Snow Water Artificial Network (SWANN) model to generate predictions of snow distributions over much larger domains, which has implications

Salinity altered root distribution and increased diversity of bacterial communities in the rhizosphere soil of Jerusalem artichoke

Science.gov (United States)

Yang, Hui; Hu, Jinxiang; Long, Xiaohua; Liu, Zhaopu; Rengel, Zed

2016-02-01

The interaction between roots and bacterial communities in halophytic species is poorly understood. Here, we used Jerusalem artichoke cultivar Nanyu 1 (NY-1) to characterise root distribution patterns and determine diversity and abundance of bacteria in the rhizosphere soil under variable salinity. Root growth was not inhibited within the salinity range 1.2 to 1.9 g salt/kg, but roots were mainly confined to 0-20 cm soil layer vertically and 0-30 cm horizontally from the plant centre. Root concentrations of K+, Na+, Mg2+ and particularly Ca2+ were relatively high under salinity stress. High salinity stress decreased soil invertase and catalase activity. Using a next-generation, Illumina-based sequencing approach, we determined higher diversity of bacteria in the rhizosphere soil at high than low salinity. More than 15,500 valid reads were obtained, and Proteobacteria, Acidobacteria, Bacteroidetes and Actinobacteria predominated in all samples, accounting for >80% of the reads. On a genus level, 636 genera were common to the low and high salinity treatments at 0-5 cm and 5-10 cm depth. The abundance of Steroidobacter and Sphingomonas was significantly decreased by increasing salinity. Higher Shannon and Chao 1 indices with increasing severity of salt stress indicated that high salt stress increased diversity in the bacterial communities.

Root activity distribution pattern of Ganesh pomegranate (Punica granatum) seedlings

International Nuclear Information System (INIS)

Kotur, S.C.; Murthy, S.V.K.

2001-01-01

In one-year old Ganesh pomegranate seedlings raised on a loamy sand (Typic Haplustalf) under rain fed conditions, during winter (January-March) one-half of the active roots (44-51%) resided at 50 cm radial distance. Depth wise, bulk (44-78%) of the roots were found at 15 cm depth. The results indicate that the zone of high root activity is located around 50 cm distance from trunk and applications of fertilizers in this zone may lead to enhanced use efficiency of fertilizers. (author)

Spatial Distribution of Root and Crown Rot Fungi Associated With Winter Wheat in the North China Plain and Its Relationship With Climate Variables

Science.gov (United States)

Xu, Fei; Yang, Gongqiang; Wang, Junmei; Song, Yuli; Liu, Lulu; Zhao, Kai; Li, Yahong; Han, Zihang

2018-01-01

The distribution frequency of pathogenic fungi associated with root and crown rot of winter wheat (Triticum aestivum) from 104 fields in the North China Plain was determined during the period from 2013 to 2016. The four most important species identified were Bipolaris sorokiniana (24.0% from roots; 33.7% from stems), Fusarium pseudograminearum (14.9% from roots; 27.8% from stems), Rhizoctonia cerealis (1.7% from roots; 4.4% from stems), and Gaeumannomyces graminis var. tritici (9.8% from roots; 4.4% from stems). We observed that the recovered species varied with the agronomic zone. Fusarium pseudograminearum was predominant in regions 1 and 3, whereas F. graminearum, F. acuminatum, and R. cerealis were predominant in regions 2 and 4. The incidence of F. pseudograminearum and R. cerealis was significantly different between regions 1 and 4, while no significant association was found in the distribution of the other species and the agronomic zones. A negative correlation between the frequency of occurrence of F. pseudograminearum and mean annual precipitation during 2013–2016 (r = −0.71; P wheat, two or more root and crown rot species were isolated. The coexistence of Fusarium spp. and B. sorokiniana in one field (65.4%) or in individual plants (11.6%) was more common than for the other species combinations. Moreover, this is the first report on the association between F. sinensis and root and crown rot of wheat. Our results would be useful in the framing guidelines for the management of root and crown rot fungi in wheat in different agronomic zones of the North China Plain. PMID:29887840

Root Systems of Individual Plants, and the Biotic and Abiotic Factors Controlling Their Depth and Distribution: a Synthesis Using a Global Database.

Science.gov (United States)

Tumber-Davila, S. J.; Schenk, H. J.; Jackson, R. B.

2017-12-01

This synthesis examines plant rooting distributions globally, by doubling the number of entries in the Root Systems of Individual Plants database (RSIP) created by Schenk and Jackson. Root systems influence many processes, including water and nutrient uptake and soil carbon storage. Root systems also mediate vegetation responses to changing climatic and environmental conditions. Therefore, a collective understanding of the importance of rooting systems to carbon sequestration, soil characteristics, hydrology, and climate, is needed. Current global models are limited by a poor understanding of the mechanisms affecting rooting, carbon stocks, and belowground biomass. This improved database contains an extensive bank of records describing the rooting system of individual plants, as well as detailed information on the climate and environment from which the observations are made. The expanded RSIP database will: 1) increase our understanding of rooting depths, lateral root spreads and above and belowground allometry; 2) improve the representation of plant rooting systems in Earth System Models; 3) enable studies of how climate change will alter and interact with plant species and functional groups in the future. We further focus on how plant rooting behavior responds to variations in climate and the environment, and create a model that can predict rooting behavior given a set of environmental conditions. Preliminary results suggest that high potential evapotranspiration and seasonality of precipitation are indicative of deeper rooting after accounting for plant growth form. When mapping predicted deep rooting by climate, we predict deepest rooting to occur in equatorial South America, Africa, and central India.

Root-soil relationships and terroir

Science.gov (United States)

Tomasi, Diego

2015-04-01

Soil features, along with climate, are among the most important determinants of a succesful grape production in a certain area. Most of the studies, so far, investigated the above-ground vine response to differente edaphic and climate condition, but it is clearly not sufficient to explain the vine whole behaviour. In fact, roots represent an important part of the terroir system (soil-plant-atmosphere-man), and their study can provide better comprehension of vine responses to different environments. The root density and distribution, the ability of deep-rooting and regenerating new roots are good indicators of root well-being, and represents the basis for an efficient physiological activity of the root system. Root deepening and distribution are strongly dependent and sensitive on soil type and soil properties, while root density is affected mostly by canopy size, rootstock and water availability. According to root well-being, soil management strategies should alleviate soil impediments, improving aeration and microbial activity. Moreover, agronomic practices can impact root system performance and influence the above-ground growth. It is well known, for example, that the root system size is largely diminished by high planting densities. Close vine spacings stimulate a more effective utilization of the available soil, water and nutrients, but if the competition for available soil becomes too high, it can repress vine growth, and compromise vineyard longevity, productivity and reaction to growing season weather. Development of resilient rootstocks, more efficient in terms of water and nutrient uptake and capable of dealing with climate and soil extremes (drought, high salinity) are primary goals fore future research. The use of these rootstocks will benefit a more sustainable use of the soil resources and the preservation and valorisation of the terroir.

Effect of tree roots on shallow-seated landslides

Science.gov (United States)

Kazutoki Abe Abe; Robert R. Ziemer

1991-01-01

Forest vegetation, especially tree roots, helps stabilize hillslopes by reinforcing soil shear strength. To evaluate the effect of tree roots on slope stability, information about the amount of roots and their strength should be known. A simulation model for the root distribution of Cryptomeria japonica was proposed where the number of roots in each 0.5-cm diameter...

Changes in root gravitropism, ultrastructure, and calcium balance of pea root statocytes induced by A23187

Science.gov (United States)

Belyavskaya, N.

The role for calcium in the regulation of a wide variety of cellular events in plants is well known. Calcium signaling has been implicated in plant gravitropism. A carboxylic acid antibiotic A23187 (calcimycin) has been widely used in biological studies since it can translocate calcium across membranes. Seedlings of Pisum sativum L. cv. Uladovsky germinated in a vertically oriented cylinder of moist filter paper soaked in water during 4.5 day had been treated with 10-5 M A23187 for 12 hr. Tips of primary roots of control and A23187-treated pea seedlings were fixed for electron microscopy and electron cytochemistry. Experiments with Pisum sativum 5- day seedlings placed horizontally for 4 h after treatment with 10 μM A23187 during 12 h found that the graviresponsiveness of their primary roots was lost completely (91 % of roots) or inhibited (24 +/- 6° in comparison with 88 +/- 8° in control). At ultrastructural level, there were observed distribution of amyloplasts around the nucleus, remarkable lengthening of statocytes, advanced vacuolization, changes in dictyosome structure, ER fragmentation, cell wall thinning in A23187-treated statocytes. Cytochemical study has indicated that statocytes exposed to calcimycin have contained a number of Ca-pyroantimonate granules detected Ca 2 + ions in organelles and hyaloplasm (unlike the control ones). The deposits were mainly associated with the plasma membrane. Among organelles, mitochondria were notable for their ability to accumulate Ca 2 +. In amyloplasts, a fine precipitate was predominately located in their stroma and envelope lumens. In cell walls, deposits of the reaction product were observed along the periphery and in the median zone. Localization of electron-dense granules of lead phosphate, which indicated Ca 2 +- ATPase activities in pea statocytes exposed to A23187, was generally consistent with that in untreated roots. Apart from plasma membrane, chromatin, and nucleolus components, the cytochemical reaction

ROOT — A C++ framework for petabyte data storage, statistical analysis and visualization

Science.gov (United States)

Antcheva, I.; Ballintijn, M.; Bellenot, B.; Biskup, M.; Brun, R.; Buncic, N.; Canal, Ph.; Casadei, D.; Couet, O.; Fine, V.; Franco, L.; Ganis, G.; Gheata, A.; Maline, D. Gonzalez; Goto, M.; Iwaszkiewicz, J.; Kreshuk, A.; Segura, D. Marcos; Maunder, R.; Moneta, L.; Naumann, A.; Offermann, E.; Onuchin, V.; Panacek, S.; Rademakers, F.; Russo, P.; Tadel, M.

2011-06-01

new TEfficiency class has been provided to handle the calculation of efficiencies and their uncertainties, TH2Poly for polygon-shaped bins (e.g. maps), TKDE for kernel density estimation, and TSVDUnfold for singular value decomposition. Graphics Kerning is now supported in TLatex, PostScript and PDF; a table of contents can be added to PDF files. A new font provides italic symbols. A TPad containing GL can be stored in a binary (i.e. non-vector) image file; add support for full-scene anti-aliasing. Usability enhancements to EVE. Math New interfaces for generating random number according to a given distribution, goodness of fit tests of unbinned data, binning multidimensional data, and several advanced statistical functions were added. RooFit Introduction of HistFactory; major additions to RooStats. TMVA Updated to version 4.1.0, adding e.g. the support for simultaneous classification of multiple output classes for several multivariate methods. PROOF Many new features, adding to PROOF's usability, plus improvements and fixes. PyROOT Support of Python 3 has been added. Tutorials Several new tutorials were provided for above new features (notably RooStats). A detailed list of all the changes is available at http://root.cern.ch/root/htmldoc/examples/V5. Additional comments: For an up-to-date author list see: http://root.cern.ch/drupal/content/root-development-team and http://root.cern.ch/drupal/content/former-root-developers. The distribution file for this program is over 30 Mbytes and therefore is not delivered directly when download or E-mail is requested. Instead a html file giving details of how the program can be obtained is sent. Running time: Depending on the data size and complexity of analysis algorithms. References: id="pr0100" view="all">http://root.cern.ch. http://root.cern.ch/drupal/content/production-version-528. I. Antcheva, M. Ballintijn, B. Bellenot, M. Biskup, R. Brun, N. Buncic, Ph. Canal, D. Casadei, O. Couet, V. Fine, L. Franco, G. Ganis, A. Gheata, D

Investigating the Relationships between Canopy Characteristics and Snow Depth Distribution at Fine Scales: Preliminary Results from the SnowEX TLS Campaign

Science.gov (United States)

Glenn, N. F.; Uhlmann, Z.; Spaete, L.; Tennant, C.; Hiemstra, C. A.; McNamara, J.

2017-12-01

Predicting changes in forested seasonal snowpacks under altered climate scenarios is one of the most pressing hydrologic challenges facing today's society. Airborne- and satellite-based remote sensing methods hold the potential to transform measurements of terrestrial water stores in snowpack, improve process representations of snowpack accumulation and ablation, and to generate high quality predictions that inform potential strategies to better manage water resources. While the effects of forest on snowpack are well documented, many of the fine-scale processes influenced by the forest-canopy are not directly accounted for because most snow models don't explicitly represent canopy structure and canopy heterogeneity. This study investigates the influence of forest canopy on snowpack distribution at fine scales and quantifies the influence of canopy heterogeneity on snowpack accumulation and ablation processes. We use terrestrial laser scanning (TLS) data collected during the SnowEX campaign to discover how the relationships between canopy and snow distributions change across scales. Our sample scales range from individual trees to patches of trees across the Grand Mesa, CO, SnowEx site.

CLE peptides regulate lateral root development in response to nitrogen nutritional status of plants.

Science.gov (United States)

Araya, Takao; von Wirén, Nicolaus; Takahashi, Hideki

2014-01-01

CLE (CLAVATA3/embryo surrounding region (ESR)) peptides control meristem functions in plants. Our recent study highlights the critical role of a peptide-receptor signaling module composed of nitrogen (N)-responsive CLE peptides and the CLAVATA1 (CLV1) leucine-rich repeat receptor-like kinase in controlling lateral root development in Arabidopsis thaliana. CLE1, -3, -4 and -7 are expressed in root pericycle cells in Arabidopsis roots under N-limited growth conditions. Overexpression of these CLE genes inhibits lateral root emergence from the primary root. The inhibitory action of N-responsive CLE peptides on lateral root development requires the function of CLV1 expressed in phloem companion cells in roots, suggesting that downstream signals are transferred through phloem for systemic regulation of root system architecture. An additional mechanism downstream of CLV1 feedback-regulates transcript levels of N-responsive CLE genes in roots for fine-tuning the signal amplitude.

Properties of estimated characteristic roots

OpenAIRE

Bent Nielsen; Heino Bohn Nielsen

2008-01-01

Estimated characteristic roots in stationary autoregressions are shown to give rather noisy information about their population equivalents. This is remarkable given the central role of the characteristic roots in the theory of autoregressive processes. In the asymptotic analysis the problems appear when multiple roots are present as this implies a non-differentiablity so the δ-method does not apply, convergence rates are slow, and the asymptotic distribution is non-normal. In finite samples ...

Temporal and spatial distribution of roots and competition for nitrogen in pea-barley intercrops - a field study employing P-32 technique

DEFF Research Database (Denmark)

Hauggaard-Nielsen, H.; Ambus, P.; Jensen, E.S.

2001-01-01

was the dominant component of the pea-barley intercrop, obtaining 90% of its sole crop yield, while pea produced only 15% of the grains of a sole crop pea. Intercropping of pea and barley improved the utilization of plant growth resources (LER > 1) as compared to sole crops. Root system distribution in time...... and space can partly explain interspecific competition. The P-32 methodology proved to be a valuable tool for determining root dynamics in intercropping systems....

Artificial Plant Root System Growth for Distributed Optimization: Models and Emergent Behaviors

Directory of Open Access Journals (Sweden)

Su Weixing

2016-01-01

Full Text Available Plant root foraging exhibits complex behaviors analogous to those of animals, including the adaptability to continuous changes in soil environments. In this work, we adapt the optimality principles in the study of plant root foraging behavior to create one possible bio-inspired optimization framework for solving complex engineering problems. This provides us with novel models of plant root foraging behavior and with new methods for global optimization. This framework is instantiated as a new search paradigm, which combines the root tip growth, branching, random walk, and death. We perform a comprehensive simulation to demonstrate that the proposed model accurately reflects the characteristics of natural plant root systems. In order to be able to climb the noise-filled gradients of nutrients in soil, the foraging behaviors of root systems are social and cooperative, and analogous to animal foraging behaviors.

Spatial distribution of arsenic and heavy metals in willow roots from a contaminated floodplain soil measured by X-ray fluorescence spectroscopy

International Nuclear Information System (INIS)

Zimmer, Dana; Kruse, Jens; Baum, Christel; Borca, Camelia; Laue, Michael; Hause, Gerd; Meissner, Ralph; Leinweber, Peter

2011-01-01

Under changing redox conditions some plants create plaques at their root surface, which may affect the mobility and uptake of As and heavy metals but it is unknown to what extent this also holds true for willows in contaminated floodplain soils. Therefore, willow roots were sampled from a phytoremediation trial in the contaminated floodplain of the river Elbe (Germany), cryofixed, freeze-dried, and cross sections were mapped for the distribution of As, Ca, Cu, Fe, K, Mn, Ni, S and Zn by synchrotron based X-ray fluorescence spectroscopy. The elements Ca, Cu, Ni, S and Zn were concentrated in the aerenchymatic tissue, and not associated with Fe and Mn. Mixed Fe-Mn plaques covered the surface of the willow roots and As was accumulated in these plaques. The observed association pattern between As and Fe was explained by the different sorption/desorption properties of As(III) and As(V). The Cu and Zn intensities were not associated with the intensity of Fe in the plaque, which seems to be a willow-specific difference compared to other wetland plants. These results suggested that willows are especially suited to stabilize low-phytoextractable elements like Cu and As in their roots and rhizosphere. Thus, short rotation coppicing of willows may be a practical approach to mitigate the adverse effects of floodplain soil contamination. - Research highlights: → Elemental distributions were mapped on willow roots for the first time by synchrotron-based X-ray fluorescence. → Ca, Cu, Ni, S and Zn were enriched in the aerenchyma but As, Fe and Mn formed root plaques. → The Cu and Zn enrichments in aerenchyma but absence in plaques appeared to be willow-specific. → In the plaques were three groups of pixels which strongly differed in the As to Fe and As to Mn ratios. → This indicated different species of these redox-sensitive elements.

Spatial distribution of arsenic and heavy metals in willow roots from a contaminated floodplain soil measured by X-ray fluorescence spectroscopy

Energy Technology Data Exchange (ETDEWEB)

Zimmer, Dana, E-mail: dana.zimmer@uni-rostock.de [Soil Science, University of Rostock, Justus-von-Liebig-Weg 6, D-18051 Rostock (Germany); Kruse, Jens; Baum, Christel [Soil Science, University of Rostock, Justus-von-Liebig-Weg 6, D-18051 Rostock (Germany); Borca, Camelia [Paul Scherrer Institute, Swiss Light Source, CH-5232 Villigen PSI (Switzerland); Laue, Michael [Electron Microscopy Centre, University of Rostock, Medical Faculty, Strempelstr. 14, D-18057 Rostock (Germany); Hause, Gerd [Microscopy Unit, Biocenter of the University of Halle, Weinbergweg 22, D-06120 Halle/Saale (Germany); Meissner, Ralph [UFZ-Helmholtz Centre for Environmental Research, Department of Soil Physics, Lysimeter Station, Dorfstrasse 55, D-39615 Falkenberg (Germany); Leinweber, Peter [Soil Science, University of Rostock, Justus-von-Liebig-Weg 6, D-18051 Rostock (Germany)

2011-09-01

Under changing redox conditions some plants create plaques at their root surface, which may affect the mobility and uptake of As and heavy metals but it is unknown to what extent this also holds true for willows in contaminated floodplain soils. Therefore, willow roots were sampled from a phytoremediation trial in the contaminated floodplain of the river Elbe (Germany), cryofixed, freeze-dried, and cross sections were mapped for the distribution of As, Ca, Cu, Fe, K, Mn, Ni, S and Zn by synchrotron based X-ray fluorescence spectroscopy. The elements Ca, Cu, Ni, S and Zn were concentrated in the aerenchymatic tissue, and not associated with Fe and Mn. Mixed Fe-Mn plaques covered the surface of the willow roots and As was accumulated in these plaques. The observed association pattern between As and Fe was explained by the different sorption/desorption properties of As(III) and As(V). The Cu and Zn intensities were not associated with the intensity of Fe in the plaque, which seems to be a willow-specific difference compared to other wetland plants. These results suggested that willows are especially suited to stabilize low-phytoextractable elements like Cu and As in their roots and rhizosphere. Thus, short rotation coppicing of willows may be a practical approach to mitigate the adverse effects of floodplain soil contamination. - Research highlights: {yields} Elemental distributions were mapped on willow roots for the first time by synchrotron-based X-ray fluorescence. {yields} Ca, Cu, Ni, S and Zn were enriched in the aerenchyma but As, Fe and Mn formed root plaques. {yields} The Cu and Zn enrichments in aerenchyma but absence in plaques appeared to be willow-specific. {yields} In the plaques were three groups of pixels which strongly differed in the As to Fe and As to Mn ratios. {yields} This indicated different species of these redox-sensitive elements.

Modelling deep water habitats to develop a spatially explicit, fine scale understanding of the distribution of the western rock lobster, Panulirus cygnus.

Directory of Open Access Journals (Sweden)

Renae K Hovey

Full Text Available BACKGROUND: The western rock lobster, Panulirus cygnus, is endemic to Western Australia and supports substantial commercial and recreational fisheries. Due to and its wide distribution and the commercial and recreational importance of the species a key component of managing western rock lobster is understanding the ecological processes and interactions that may influence lobster abundance and distribution. Using terrain analyses and distribution models of substrate and benthic biota, we assess the physical drivers that influence the distribution of lobsters at a key fishery site. METHODS AND FINDINGS: Using data collected from hydroacoustic and towed video surveys, 20 variables (including geophysical, substrate and biota variables were developed to predict the distributions of substrate type (three classes of reef, rhodoliths and sand and dominant biota (kelp, sessile invertebrates and macroalgae within a 40 km(2 area about 30 km off the west Australian coast. Lobster presence/absence data were collected within this area using georeferenced pots. These datasets were used to develop a classification tree model for predicting the distribution of the western rock lobster. Interestingly, kelp and reef were not selected as predictors. Instead, the model selected geophysical and geomorphic scalar variables, which emphasise a mix of terrain within limited distances. The model of lobster presence had an adjusted D(2 of 64 and an 80% correct classification. CONCLUSIONS: Species distribution models indicate that juxtaposition in fine scale terrain is most important to the western rock lobster. While key features like kelp and reef may be important to lobster distribution at a broad scale, it is the fine scale features in terrain that are likely to define its ecological niche. Determining the most appropriate landscape configuration and scale will be essential to refining niche habitats and will aid in selecting appropriate sites for protecting critical

Modelling Deep Water Habitats to Develop a Spatially Explicit, Fine Scale Understanding of the Distribution of the Western Rock Lobster, Panulirus cygnus

Science.gov (United States)

Hovey, Renae K.; Van Niel, Kimberly P.; Bellchambers, Lynda M.; Pember, Matthew B.

2012-01-01

Background The western rock lobster, Panulirus cygnus, is endemic to Western Australia and supports substantial commercial and recreational fisheries. Due to and its wide distribution and the commercial and recreational importance of the species a key component of managing western rock lobster is understanding the ecological processes and interactions that may influence lobster abundance and distribution. Using terrain analyses and distribution models of substrate and benthic biota, we assess the physical drivers that influence the distribution of lobsters at a key fishery site. Methods and Findings Using data collected from hydroacoustic and towed video surveys, 20 variables (including geophysical, substrate and biota variables) were developed to predict the distributions of substrate type (three classes of reef, rhodoliths and sand) and dominant biota (kelp, sessile invertebrates and macroalgae) within a 40 km2 area about 30 km off the west Australian coast. Lobster presence/absence data were collected within this area using georeferenced pots. These datasets were used to develop a classification tree model for predicting the distribution of the western rock lobster. Interestingly, kelp and reef were not selected as predictors. Instead, the model selected geophysical and geomorphic scalar variables, which emphasise a mix of terrain within limited distances. The model of lobster presence had an adjusted D2 of 64 and an 80% correct classification. Conclusions Species distribution models indicate that juxtaposition in fine scale terrain is most important to the western rock lobster. While key features like kelp and reef may be important to lobster distribution at a broad scale, it is the fine scale features in terrain that are likely to define its ecological niche. Determining the most appropriate landscape configuration and scale will be essential to refining niche habitats and will aid in selecting appropriate sites for protecting critical lobster habitats. PMID

Modelling deep water habitats to develop a spatially explicit, fine scale understanding of the distribution of the western rock lobster, Panulirus cygnus.

Science.gov (United States)

Hovey, Renae K; Van Niel, Kimberly P; Bellchambers, Lynda M; Pember, Matthew B

2012-01-01

The western rock lobster, Panulirus cygnus, is endemic to Western Australia and supports substantial commercial and recreational fisheries. Due to and its wide distribution and the commercial and recreational importance of the species a key component of managing western rock lobster is understanding the ecological processes and interactions that may influence lobster abundance and distribution. Using terrain analyses and distribution models of substrate and benthic biota, we assess the physical drivers that influence the distribution of lobsters at a key fishery site. Using data collected from hydroacoustic and towed video surveys, 20 variables (including geophysical, substrate and biota variables) were developed to predict the distributions of substrate type (three classes of reef, rhodoliths and sand) and dominant biota (kelp, sessile invertebrates and macroalgae) within a 40 km(2) area about 30 km off the west Australian coast. Lobster presence/absence data were collected within this area using georeferenced pots. These datasets were used to develop a classification tree model for predicting the distribution of the western rock lobster. Interestingly, kelp and reef were not selected as predictors. Instead, the model selected geophysical and geomorphic scalar variables, which emphasise a mix of terrain within limited distances. The model of lobster presence had an adjusted D(2) of 64 and an 80% correct classification. Species distribution models indicate that juxtaposition in fine scale terrain is most important to the western rock lobster. While key features like kelp and reef may be important to lobster distribution at a broad scale, it is the fine scale features in terrain that are likely to define its ecological niche. Determining the most appropriate landscape configuration and scale will be essential to refining niche habitats and will aid in selecting appropriate sites for protecting critical lobster habitats.

Alpha-root Processes for Derivatives pricing

OpenAIRE

Balakrishna, BS

2010-01-01

A class of mean reverting positive stochastic processes driven by alpha-stable distributions, referred to here as alpha-root processes in analogy to the square root process (Cox-Ingersoll-Ross process), is a subclass of affine processes, in particular continuous state branching processes with immigration (CBI processes). Being affine, they provide semi-analytical results for the implied term structures as well as for the characteristic exponents for their associated distributions. Their use h...

UV-B Radiation Induces Root Bending Through the Flavonoid-Mediated Auxin Pathway in Arabidopsis.

Science.gov (United States)

Wan, Jinpeng; Zhang, Ping; Wang, Ruling; Sun, Liangliang; Wang, Wenying; Zhou, Huakun; Xu, Jin

2018-01-01

Ultraviolet (UV)-B radiation-induced root bending has been reported; however, the underlying mechanisms largely remain unclear. Here, we investigate whether and how auxin and flavonoids are involved in UV-B radiation-induced root bending in Arabidopsis using physiological, pharmacological, and genetic approaches. UV-B radiation modulated the direction of root growth by decreasing IAA biosynthesis and affecting auxin distribution in the root tips, where reduced auxin accumulation and asymmetric auxin distribution were observed. UV-B radiation increased the distribution of auxin on the nonradiated side of the root tips, promoting growth and causing root bending. Further analysis indicated that UV-B induced an asymmetric accumulation of flavonoids; this pathway is involved in modulating the accumulation and asymmetric distribution of auxin in root tips and the subsequent redirection of root growth by altering the distribution of auxin carriers in response to UV-B radiation. Taken together, our results indicate that UV-B radiation-induced root bending occurred through a flavonoid-mediated phototropic response to UV-B radiation.

Soil properties and root biomass responses to prescribed burning in young Corsican pine (Pinus nigra Arn.) stands.

Science.gov (United States)

Tufekcioglu, Aydin; Kucuk, Mehmet; Saglam, Bulent; Bilgili, Ertugrul; Altun, Lokman

2010-05-01

Fire is an important tool in the management of forest ecosystems. Although both prescribed and wildland fires are common in Turkey, few studies have addressed the influence of such disturbances on soil properties and root biomass dynamics. In this study, soil properties and root biomass responses to prescribed fire were investigated in 25-year-old corsican pine (Pinus nigra Arn.) stands in Kastamonu, Turkey. The stands were established by planting and were subjected to prescribed burning in July 2003. Soil respiration rates were determined every two months using soda-lime method over a two-year period. Fine (0-2 mm diameter) and small root (2-5 mm diameter) biomass were sampled approximately bimonthly using sequential coring method. Mean daily soil respiration ranged from 0.65 to 2.19 g Cm(-2) d(-1) among all sites. Soil respiration rates were significantly higher in burned sites than in controls. Soil respiration rates were correlated significantly with soil moisture and soil temperature. Fine root biomass was significantly lower in burned sites than in control sites. Mean fine root biomass values were 4940 kg ha(-1) for burned and 5450 kg ha(-1) for control sites. Soil pH was significantly higher in burned sites than in control sites in 15-35 cm soil depth. Soil organic matter content did not differ significantly between control and burned sites. Our results indicate that, depending on site conditions, fire could be used successfully as a tool in the management of forest stands in the study area.

The effect of gamma irradiation and grounding on the microbial load of licorice roots (Glycyrrhiza glabra L.), and quality characteristics of its extract

International Nuclear Information System (INIS)

Al-Bachir, M.; Zeinou, R.

2002-12-01

Three type of ground root of licorice (fine particular 8.0 mm diameter) were divided into two groups, the first one was exposed to 0, 5, 10, 15 and 20 kGy. Whereas, the second group was exposed 0, 25, 50, 75, and 100 kGy of gamma radiation from a 60 Co source. Irradiated and non-irradiated samples were stored at room temperature. Microbial population, concentrations of glycyrrhizinic acid and some minerals of the extracts were evaluated after irradiation. The results showed that microbial count on fine particular of ground licorice roots were 10 6 g -1 , whereas, on coarse particular microbial counts was 10 5 g -1 . All size of licorice roots treated with gamma irradiation had significantly (p<0.05) lower counts than the untreated (control). The dose needed to reduce the microbial load to less than 10 bacteria per gram was 15 kGy for the fine particular of ground root, and 10 kGy for the coarse particular of ground root. The extract produced from coarse particular of ground roots had lower total dissolved solids, ash and mineral ions (Na, Ca, and K), ph, and Ec values compared with those produced from coarse particular of ground roots. Gamma irradiation decreased glycyrrhizinic acid concentrations in the extracts produced from ground licorice roots. High doses (25, 50, 75, and 100 kGy) of gamma irradiation decreased significantly the concentration of raw fiber, and glycyrrhizinic acid concentrations on ground licorice roots, and increased the dissolved solids and mineral ions (Na, Ca, and K) in extract of licorice root. Sensory evaluation indicated that there were no significant differences in colour, taste or flavour between extracts produced from irradiated with doses up to 25 kGy and non-irradiated roots. (author)

Root cytoskeleton: its role in perception of and response to gravity

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Baluska, F.; Hasenstein, K. H.

1997-01-01

We have critically evaluated the possible functions of the plant cytoskeleton in root gravisensing and graviresponse and discussed the evidence that microtubules (MTs) and actin microfilaments (MFs) do not control differential cell growth during bending of roots. On the other hand, MF and MT networks are envisaged to participate in gravisensing because of the mechanical properties of the cytoskeletal structures that interconnect plant cell organelles with the plasma membrane. In restrained gravisensing, forces are suggested to be transmitted to membranes because large-scale gravity-dependent repositioning of organelles is effectively prevented due to the cytoskeleton-mediated anchorage of their envelopes at the plasma membrane. From the cytoskeletal point of view, we can also envisage an unrestrained gravity sensing when cytoskeletal tethers are not strong enough to preserve the tight control over distribution of organelles and the latter, if heavy enough, are allowed to sediment towards the physical bottom of cells. This situation obviously occurs in root cap statocytes because these uniquely organized cells are depleted of prominent actin MF bundles, endoplasmic MT arrays, and ER elements in their internal cytoplasm. Nevertheless, indirect evidence clearly indicates that sedimented root cap statoliths are enmeshed within fine but dynamic MF networks and that their behaviour is obviously under, at least partial, cytoskeletal control. The actomyosin-enriched domain among and around amyloplasts is proposed to increase the perception of gravity due to the grouping effect of sedimenting statoliths. Cytoskeletal links between myosin-rich statoliths, and cell peripheries well equipped with dense cortical MTs, membrane-associated cytoskeleton, as well as with ER elements, would allow efficient restrained gravisensing only at the statocyte cell cortex. As a consequence of cytoskeletal depletion in the internal statocyte cytoplasm and bulk sedimentation of large

Distribution of linker histone variants during plant cell differentiation in the developmental zones of the maize root, dedifferentiation in callus culture after auxin treatment

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ANASTASIOS ALATZAS

2008-01-01

Full Text Available Although several linker histone variants have been studied in both animal and plant organisms, little is known about their distribution during processes that involve alterations in chromatin function, such as differentiation, dedifferentiation and hormone treatment. In this study, we identified linker histone variants by using specific anti-histone Hl antibodies. Each variant's ratio to total Hl in the three developmental zones of maize (Zea mays L. root and in callus cultures derived from them was estimated in order to define possible alterations either during plant cell differentiation or during their dedifferentiation. We also evaluated linker histone variants' ratios in the developmental zones of maize roots treated with auxin in order to examine the effects of exogenous applied auxin to linker histone variant distribution. Finally, immunohistochemical detection was used to identify the root tissues containing each variant and correlate them with the physiological status of the plant cells. According to the results presented in this study, linker histone variants' ratios are altered in the developmental zones of maize root, while they are similar to the meristematic zone in samples from callus cultures and to the differentiation zone in samples from roots treated with auxin. We propose that the alterations in linker histone variants' ratios are correlated with plant cell differentiation and dedifferentiation.

Factors affecting distribution and mobility of trace elements (Cu, Pb, Zn) in a perennial grapevine (Vitis vinifera L.) in the Champagne region of France

Energy Technology Data Exchange (ETDEWEB)

Chopin, E.I.B. [GEGENA EA 3795, University of Reims Champagne-Ardenne, 2 esplanade Roland Garros, 51100 Reims (France)], E-mail: edithchopin@softhome.net; Marin, B.; Mkoungafoko, R.; Rigaux, A. [GEGENA EA 3795, University of Reims Champagne-Ardenne, 2 esplanade Roland Garros, 51100 Reims (France); Hopgood, M.J. [Department of Soil Science, School of Human and Environmental Sciences, University of Reading, Whiteknights, Reading, RG6 6DW (United Kingdom); Delannoy, E.; Cances, B.; Laurain, M. [GEGENA EA 3795, University of Reims Champagne-Ardenne, 2 esplanade Roland Garros, 51100 Reims (France)

2008-12-15

Soil and Vitis vinifera L. (coarse and fine roots, leaves, berries) concentration and geochemical partitioning of Cu, Pb and Zn were determined in a contaminated calcareous Champagne plot to assess their mobility and transfer. Accumulation ratios in roots remained low (0.1-0.4 for Cu and Zn, <0.05 for Pb). Differences between elements resulted from vegetation uptake strategy and soil partitioning. Copper, significantly associated with the oxidisable fraction (27.8%), and Zn with the acid soluble fraction (33.3%), could be mobilised by rhizosphere acidification and oxidisation, unlike Pb, essentially contained in the reducible fraction (72.4%). Roots should not be considered as a whole since the more reactive fine roots showed higher accumulation ratios than coarse ones. More sensitive response of fine roots, lack of correlation between chemical extraction results and vegetation concentrations, and very limited translocation to aerial parts showed that fine root concentrations should be used when assessing bioavailability. - Soil Cu, Pb and Zn concentration and partitioning were combined to accumulation ratio to study the transfer of trace element from soil to Vitis vinifera L. roots and aerial parts in a contaminated vineyard plot.

Factors affecting distribution and mobility of trace elements (Cu, Pb, Zn) in a perennial grapevine (Vitis vinifera L.) in the Champagne region of France

International Nuclear Information System (INIS)

Chopin, E.I.B.; Marin, B.; Mkoungafoko, R.; Rigaux, A.; Hopgood, M.J.; Delannoy, E.; Cances, B.; Laurain, M.

2008-01-01

Soil and Vitis vinifera L. (coarse and fine roots, leaves, berries) concentration and geochemical partitioning of Cu, Pb and Zn were determined in a contaminated calcareous Champagne plot to assess their mobility and transfer. Accumulation ratios in roots remained low (0.1-0.4 for Cu and Zn, <0.05 for Pb). Differences between elements resulted from vegetation uptake strategy and soil partitioning. Copper, significantly associated with the oxidisable fraction (27.8%), and Zn with the acid soluble fraction (33.3%), could be mobilised by rhizosphere acidification and oxidisation, unlike Pb, essentially contained in the reducible fraction (72.4%). Roots should not be considered as a whole since the more reactive fine roots showed higher accumulation ratios than coarse ones. More sensitive response of fine roots, lack of correlation between chemical extraction results and vegetation concentrations, and very limited translocation to aerial parts showed that fine root concentrations should be used when assessing bioavailability. - Soil Cu, Pb and Zn concentration and partitioning were combined to accumulation ratio to study the transfer of trace element from soil to Vitis vinifera L. roots and aerial parts in a contaminated vineyard plot

Sample preparation and scanning protocol for computerised analysis of root length and diameter

NARCIS (Netherlands)

Bouma, T.J.; Nielsen, K.F.; Koutstaal, B.P.

2000-01-01

Root length and diameter distribution are important characteristics to be considered when describing and comparing root systems. Root length and root-diameter distribution may be obtained in two ways: by microscopical measurements, which are laborious, or by computerised analysis, which is fast but

Root deformation reduces tolerance of lodgepole pine to attack by Warren root collar weevil.

Science.gov (United States)

Robert, Jeanne A; Lindgren, B Staffan

2010-04-01

Surveys were conducted on regenerating stands of lodgepole pine to determine the relationship between root deformation and susceptibility to attack by the Warren root collar weevil, Hylobius warreni Wood. The total number of trees attacked by H. warreni did not differ between planted and natural trees. A matched case-control logistic regression suggested that root cross-sectional area was more important in predicting weevil attack for naturally regenerated trees than for planted trees, but weevils were associated with a larger reduction in height-to-diameter ratios for trees with planted root characteristics than for trees with natural root form. Neither the stability of attacked versus unattacked trees differed significantly and there was no significant interaction of weevil attack and tree type, but weevil-killed trees had different root characteristics than alive, attacked trees. Lateral distribution and root cross-sectional area were significant predictors of alive attacked trees versus weevil-killed trees, suggesting that trees with poor lateral spread or poor root cross-sectional area are more likely to die from weevil attack. We conclude that root deformation does not necessarily increase susceptibility to attack but may increase the likelihood of mortality. Thus, measures to facilitate good root form are needed when planting pine in areas with high risk of Warren root collar weevil attack.

A statistical approach to root system classification.

Directory of Open Access Journals (Sweden)

Gernot eBodner

2013-08-01

Full Text Available Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for plant functional type identification in ecology can be applied to the classification of root systems. We demonstrate that combining principal component and cluster analysis yields a meaningful classification of rooting types based on morphological traits. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. Biplot inspection is used to determine key traits and to ensure stability in cluster based grouping. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Three rooting types emerged from measured data, distinguished by diameter/weight, density and spatial distribution respectively. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement

Living roots effect on 14C-labelled root litter decomposition

International Nuclear Information System (INIS)

Billes, G.; Bottner, P.

1981-01-01

Wheat was 14 C-labelled by cultivation on soil in pots, from seedling to maturity, in a chamber with constant CO 2 and 14 CO 2 levels. The 14 C-distribution was constant amongst the aerial parts, the roots and the soil in the whole pots. After cutting the plant tops, the pots were dried without disturbing the soil and root system. The pots were then incubated under controlled humidity and temperature conditions for 62 days. In the same time a second wheat cultivation was grown on one half of the pots in normal atmosphere without plant cultivation. The purpose of the work is to study the effect of living roots on decomposition of the former 14 C labelled roots litter. The CO 2 and the 14 CO 2 released from the soil were continuously measured. On incubation days 0, 18, 33 and 62, the remaining litter was separated from soil, and the organic matter was fractionated by repeated hydrolysis and NaOH extraction. Root litter disappeared faster when living roots were present than in bare soil. The accumulation and mineralization rates of humified components in soil followed two stages. While the roots of second wheat cultivation grew actively (until earing), the strong acid hydrolysable components accumulated in larger amount than in the case of bare soil. After earing, while roots activity was depressed, these components were partly mineralized and the 14 CO 2 release was then higher with plants than with bare soil. The humification and mineralization rate were related with living plant phenology stages. (orig.)

Two proofs of Fine's theorem

International Nuclear Information System (INIS)

Halliwell, J.J.

2014-01-01

Fine's theorem concerns the question of determining the conditions under which a certain set of probabilities for pairs of four bivalent quantities may be taken to be the marginals of an underlying probability distribution. The eight CHSH inequalities are well-known to be necessary conditions, but Fine's theorem is the striking result that they are also sufficient conditions. Here two transparent and self-contained proofs of Fine's theorem are presented. The first is a physically motivated proof using an explicit local hidden variables model. The second is an algebraic proof which uses a representation of the probabilities in terms of correlation functions. - Highlights: • A discussion of the various approaches to proving Fine's theorem. • A new physically-motivated proof using a local hidden variables model. • A new algebraic proof. • A new form of the CHSH inequalities

[Effects and mechanisms of plant roots on slope reinforcement and soil erosion resistance: a research review].

Science.gov (United States)

Xiong, Yan-Mei; Xia, Han-Ping; Li, Zhi-An; Cai, Xi-An

2007-04-01

Plant roots play an important role in resisting the shallow landslip and topsoil erosion of slopes by raising soil shear strength. Among the models in interpreting the mechanisms of slope reinforcement by plant roots, Wu-Waldron model is a widely accepted one. In this model, the reinforced soil strength by plant roots is positively proportional to average root tensile strength and root area ratio, the two most important factors in evaluating slope reinforcement effect of plant roots. It was found that soil erosion resistance increased with the number of plant roots, though no consistent quantitative functional relationship was observed between them. The increase of soil erosion resistance by plant roots was mainly through the actions of fiber roots less than 1 mm in diameter, while fiber roots enhanced the soil stability to resist water dispersion via increasing the number and diameter of soil water-stable aggregates. Fine roots could also improve soil permeability effectively to decrease runoff and weaken soil erosion.

Simulated root dynamics of a 160-year-old sugar maple (Acer saccharum Marsh.) tree with and without ozone exposure using the TREGRO model.

Science.gov (United States)

Retzlaff, W. A.; Weinstein, D. A.; Laurence, J. A.; Gollands, B.

1996-01-01

Because of difficulties in directly assessing root responses of mature forest trees exposed to atmospheric pollutants, we have used the model TREGRO to analyze the effects of a 3- and a 10-year exposure to ozone (O(3)) on root dynamics of a simulated 160-year-old sugar maple (Acer saccharum Marsh.) tree. We used existing phenological, allometric, and growth data to parameterize TREGRO to produce a simulated 160-year-old tree. Simulations were based on literature values for sugar maple fine root production and senescence and the photosynthetic responses of sugar maple seedlings exposed to O(3) in open-top chambers. In the simulated 3-year exposure to O(3), 2 x ambient atmospheric O(3) concentrations reduced net carbon (C) gain of the 160-year-old tree. This reduction occurred in the C storage pools (total nonstructural carbohydrate, TNC), with most of the reduction occurring in coarse (woody) roots. Total fine root production and senescence were unaffected by the simulated 3-year exposure to O(3). However, extending the simulated O(3) exposure period to 10 years depleted the TNC pools of the coarse roots and reduced total fine root production. Similar reductions in TNC pools have been observed in forest-grown sugar maple trees exhibiting symptoms of stress. We conclude that modeling can aid in evaluating the belowground response of mature forest trees to atmospheric pollution stress and could indicate the potential for gradual deterioration of tree health under conditions of long-term stress, a situation similar to that underlying the decline of sugar maple trees.

Soil sheaths, photosynthate distribution to roots, and rhizosphere water relations for Opuntia ficus-indica

Energy Technology Data Exchange (ETDEWEB)

Huang, B.; North, G.B.; Nobel, P.S. (Univ. of California, Los Angeles, CA (United States))

1993-09-01

Soil sheaths incorporating aggregated soil particles surround young roots of many species, but the effects of such sheaths on water movement between roots and the soil are largely unknown. The quantity and location of root exudates associated with soil sheath along the entire length of its young roots, except within 1.4 cm of the tip. The soil sheaths, which average 0.7 mm in thickness, were composed of soil particles and root hairs, both of which were covered with exuded mucilaginous material. As determined with a [sup 14]C pulse-labeling technique, 2% of newly fixed [sup 14]C-photosynthate was translocated into the roots at 3d, 6% at 9 d, and 8% at 15 d after labeling. The fraction of insoluble [sup 14]C in the roots increased twofold from 3 d to 15 d. Over the same time period, 6%-9% of the [sup 14]C translocated to the roots was exuded into the soil. The soluble [sup 14]C compounds exuded into the soil were greater in the 3-cm segment at the root tip than elsewhere along the root, whereas mucilage was exuded relatively uniformly along roots 15 cm in length. The volumetric efflux of water increase for both sheathed and unsheathed roots as the soil water potential decreased form -0.1 MPa to -1.0 MPa. The efflux rate was greater for unsheathed roots than for sheathed roots, which were more turgid and had a higher water potential, especially at lower soil water potentials. During drying, soil particles in the sheaths aggregate more tightly, making the sheaths less permeable to water and possibly creating air gaps. The soil sheaths of O. ficus-indica thus reduce water loss from the roots to a drying soil. 34 refs., 6 figs., 1 tab.

Distribution and ecological relevance of fine sediments in organic-enriched lagoons: The case study of the Cabras lagoon (Sardinia, Italy)

Energy Technology Data Exchange (ETDEWEB)

Magni, P. [CNR-IAMC, National Research Council - Institute for Coastal Marine Environment Localita Sa Mardini, Torregrande, 09072 Oristano (Italy); International Marine Centre, Localita Sa Mardini, Torregrande, 09072 Oristano (Italy)], E-mail: paolo.magni@iamc.cnr.it; De Falco, G. [CNR-IAMC, National Research Council - Institute for Coastal Marine Environment Localita Sa Mardini, Torregrande, 09072 Oristano (Italy); International Marine Centre, Localita Sa Mardini, Torregrande, 09072 Oristano (Italy); Como, S. [International Marine Centre, Localita Sa Mardini, Torregrande, 09072 Oristano (Italy); Casu, D. [Dip. di Botanica ed Ecologia vegetale, Universita di Sassari, 07100 Sassari (Italy); Floris, A. [Dip. di Zoologia e Genetica evoluzionistica, Universita di Sassari, 07100 Sassari (Italy); Petrov, A.N. [Institute of Biology of the Southern Seas NASU, 99011 Sevastopol (Ukraine); Castelli, A. [Dip. di Biologia, Universita di Pisa, 56126 Pisa (Italy); Perilli, A. [CNR-IAMC, National Research Council - Institute for Coastal Marine Environment Localita Sa Mardini, Torregrande, 09072 Oristano (Italy); International Marine Centre, Localita Sa Mardini, Torregrande, 09072 Oristano (Italy)

2008-03-15

In organic-enriched sedimentary systems, like many Mediterranean coastal lagoons, a detailed analysis of sediment grain size composition and partitioning within the muds is crucial to investigate sedimentological trends related to both hydrodynamic energy and basin morphology. In these systems, sediment dynamics are particularly important because the partitioning and transport of fine sediments can strongly influence the redistribution and accumulation of large amounts of organic matter, and consequently the distribution of benthic assemblages and the trophic status and functioning of a lagoon. Nevertheless, studies on benthic-sediment relationships have been based mainly on a rather coarse analysis of sediment grain size features. In muddy systems, however, this approach may impede a proper evaluation of the relationships and effects of the distribution of fine sediment and organic matter on the biotic benthic components. Here we show that the distribution of sedimentary organic matter (OM) and total organic carbon (TOC) in the Cabras lagoon (Sardinia, Italy) can be explained (i.e., predicted) as a function of a nonlinear increase in the amount of the cohesive fraction of sediments ({<=}8 {mu}m grain size particles) and that this fraction strongly influences the structure, composition and distribution of macrobenthic assemblages. Even in such a homogeneously muddy system, characterized by 'naturally' occurring impoverished communities, impaired benthic assemblages were found at {<=}8 {mu}m, OM, TOC contents of about 77%, 11% and 3.5%, respectively. A review of studies conducted in Mediterranean coastal lagoons highlighted a lack of direct integrated analysis of sediment features and the biotic components. We suggest that, especially in organic-enriched coastal lagoons, monitoring programs should primarily investigate and consider the cohesive fraction of sediments in order to allow a better assessment of benthic-sediment relationships and ecological

Spatial Distribution of Root and Crown Rot Fungi Associated With Winter Wheat in the North China Plain and Its Relationship With Climate Variables

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Fei Xu

2018-05-01

Full Text Available The distribution frequency of pathogenic fungi associated with root and crown rot of winter wheat (Triticum aestivum from 104 fields in the North China Plain was determined during the period from 2013 to 2016. The four most important species identified were Bipolaris sorokiniana (24.0% from roots; 33.7% from stems, Fusarium pseudograminearum (14.9% from roots; 27.8% from stems, Rhizoctonia cerealis (1.7% from roots; 4.4% from stems, and Gaeumannomyces graminis var. tritici (9.8% from roots; 4.4% from stems. We observed that the recovered species varied with the agronomic zone. Fusarium pseudograminearum was predominant in regions 1 and 3, whereas F. graminearum, F. acuminatum, and R. cerealis were predominant in regions 2 and 4. The incidence of F. pseudograminearum and R. cerealis was significantly different between regions 1 and 4, while no significant association was found in the distribution of the other species and the agronomic zones. A negative correlation between the frequency of occurrence of F. pseudograminearum and mean annual precipitation during 2013–2016 (r = −0.71; P < 0.01 in the North China Plain and a positive correlation between the mean annual precipitation during 2013–2016 and the frequency of occurrence of F. asiaticum (r = 0.74; P < 0.01 were observed. Several Fusarium species were also found with low frequencies of ~2.1%−3.4 % (F. graminearum, F. acuminatum, and F. sinensis and ~0.1%−1.3% (F. equiseti, F. oxysporum, F. proliferatum, F. culmorum, F. avenaceum, and F. asiaticum. In more than 93% of the fields, from the root and crown tissues of wheat, two or more root and crown rot species were isolated. The coexistence of Fusarium spp. and B. sorokiniana in one field (65.4% or in individual plants (11.6% was more common than for the other species combinations. Moreover, this is the first report on the association between F. sinensis and root and crown rot of wheat. Our results would be useful in the framing

Biomass production and control of nutrient leaching of willows using different planting methods with special emphasis on an appraisal of the electrical impedance for roots

Energy Technology Data Exchange (ETDEWEB)

Yang Cao

2011-07-01

Willow reproduction can be achieved through vertically or horizontally planted cuttings. Conventionally, plantations are established by inserting cuttings vertically into the soil. There is, however, a lack of information about the biomass production and nutrient leaching of plantations established through horizontally planted cuttings. A greenhouse experiment and a field trial were carried out to investigate whether horizontally planted Salix schwerinii cuttings have a positive effect on stem yield, root distribution and nutrient leaching in comparison with vertically planted cuttings with different planting densities. The shoots' height of horizontally planted cuttings was significantly smaller than that of vertically planted cuttings during the first two weeks after planting in the pot experiment. Thereafter, no significant effect of planting orientation on the stem biomass was observed in the two conducted experiments. In both experiments the total stem biomass increased with the planting density. It was also found that the fine root biomass and the specific root length were not affected by the planting orientation or density, while the fine root surface area and the absorbing root surface area (ARSA) were affected only by the planting density. The planting orientation did not affect the nutrient concentrations in the soil leachate, apart from SO{sub 4}-S and PO{sub 4}-P in the pot experiment. The ARSA in the pot experiment was assessed by using the earth impedance method. The applicability of this method was evaluated in a hydroponic study of willow cuttings where root and stem were measured independently. Electrical resistance had a good correlation with the contact area of the roots with the solution. However, the resistance depended strongly on the contact area of the stem with the solution, which caused a bias in the evaluation of root surface area. A similar experimental set-up with electrical impedance spectroscopy was employed to study the

A deeper look at the relationship between root carbon pools and the vertical distribution of the soil carbon pool

Directory of Open Access Journals (Sweden)

R. Dietzel

2017-08-01

Full Text Available Plant root material makes a substantial contribution to the soil organic carbon (C pool, but this contribution is disproportionate below 20 cm where 30 % of root mass and 50 % of soil organic C is found. Root carbon inputs changed drastically when native perennial plant systems were shifted to cultivated annual plant systems. We used the reconstruction of a native prairie and a continuous maize field to examine both the relationship between root carbon and soil carbon and the fundamental rooting system differences between the vegetation under which the soils developed versus the vegetation under which the soils continue to change. In all treatments we found that root C  :  N ratios increased with depth, and this plays a role in why an unexpectedly large proportion of soil organic C is found below 20 cm. Measured root C  :  N ratios and turnover times along with modeled root turnover dynamics showed that in the historical shift from prairie to maize, a large, structural-tissue-dominated root C pool with slow turnover concentrated at shallow depths was replaced by a small, nonstructural-tissue-dominated root C pool with fast turnover evenly distributed in the soil profile. These differences in rooting systems suggest that while prairie roots contribute more C to the soil than maize at shallow depths, maize may contribute more C to soil C stocks than prairies at deeper depths.

Soil moisture causes dynamic adjustments to root reinforcement that reduce slope stability

Science.gov (United States)

Tristram C. Hales; Chelcy F. Miniat

2017-01-01

In steep soil-mantled landscapes, the initiation of shallow landslides is strongly controlled by the distribution of vegetation, whose roots reinforce the soil. The magnitude of root reinforcement depends on the number, diameter distribution, orientation and the mechanical properties of roots that cross potential failure planes. Understanding how these...

Expressing Parallelism with ROOT

Energy Technology Data Exchange (ETDEWEB)

Piparo, D. [CERN; Tejedor, E. [CERN; Guiraud, E. [CERN; Ganis, G. [CERN; Mato, P. [CERN; Moneta, L. [CERN; Valls Pla, X. [CERN; Canal, P. [Fermilab

2017-11-22

The need for processing the ever-increasing amount of data generated by the LHC experiments in a more efficient way has motivated ROOT to further develop its support for parallelism. Such support is being tackled both for shared-memory and distributed-memory environments. The incarnations of the aforementioned parallelism are multi-threading, multi-processing and cluster-wide executions. In the area of multi-threading, we discuss the new implicit parallelism and related interfaces, as well as the new building blocks to safely operate with ROOT objects in a multi-threaded environment. Regarding multi-processing, we review the new MultiProc framework, comparing it with similar tools (e.g. multiprocessing module in Python). Finally, as an alternative to PROOF for cluster-wide executions, we introduce the efforts on integrating ROOT with state-of-the-art distributed data processing technologies like Spark, both in terms of programming model and runtime design (with EOS as one of the main components). For all the levels of parallelism, we discuss, based on real-life examples and measurements, how our proposals can increase the productivity of scientists.

Expressing Parallelism with ROOT

Science.gov (United States)

Piparo, D.; Tejedor, E.; Guiraud, E.; Ganis, G.; Mato, P.; Moneta, L.; Valls Pla, X.; Canal, P.

2017-10-01

The need for processing the ever-increasing amount of data generated by the LHC experiments in a more efficient way has motivated ROOT to further develop its support for parallelism. Such support is being tackled both for shared-memory and distributed-memory environments. The incarnations of the aforementioned parallelism are multi-threading, multi-processing and cluster-wide executions. In the area of multi-threading, we discuss the new implicit parallelism and related interfaces, as well as the new building blocks to safely operate with ROOT objects in a multi-threaded environment. Regarding multi-processing, we review the new MultiProc framework, comparing it with similar tools (e.g. multiprocessing module in Python). Finally, as an alternative to PROOF for cluster-wide executions, we introduce the efforts on integrating ROOT with state-of-the-art distributed data processing technologies like Spark, both in terms of programming model and runtime design (with EOS as one of the main components). For all the levels of parallelism, we discuss, based on real-life examples and measurements, how our proposals can increase the productivity of scientists.

Root Parameters Show How Management Alters Resource Distribution and Soil Quality in Conventional and Low-Input Cropping Systems in Central Iowa.

Directory of Open Access Journals (Sweden)

Patricia A Lazicki

Full Text Available Plant-soil relations may explain why low-external input (LEI diversified cropping systems are more efficient than their conventional counterparts. This work sought to identify links between management practices, soil quality changes, and root responses in a long-term cropping systems experiment in Iowa where grain yields of 3-year and 4-year LEI rotations have matched or exceeded yield achieved by a 2-year maize (Zea mays L. and soybean (Glycine max L. rotation. The 2-year system was conventionally managed and chisel-ploughed, whereas the 3-year and 4-year systems received plant residues and animal manures and were periodically moldboard ploughed. We expected changes in soil quality to be driven by organic matter inputs, and root growth to reflect spatial and temporal fluctuations in soil quality resulting from those additions. We constructed a carbon budget and measured soil quality indicators (SQIs and rooting characteristics using samples taken from two depths of all crop-phases of each rotation system on multiple dates. Stocks of particulate organic matter carbon (POM-C and potentially mineralizable nitrogen (PMN were greater and more evenly distributed in the LEI than conventional systems. Organic C inputs, which were 58% and 36% greater in the 3-year rotation than in the 4-year and 2-year rotations, respectively, did not account for differences in SQI abundance or distribution. Surprisingly, SQIs did not vary with crop-phase or date. All biochemical SQIs were more stratified (p<0.001 in the conventionally-managed soils. While POM-C and PMN in the top 10 cm were similar in all three systems, stocks in the 10-20 cm depth of the conventional system were less than half the size of those found in the LEI systems. This distribution was mirrored by maize root length density, which was also concentrated in the top 10 cm of the conventionally managed plots and evenly distributed between depths in the LEI systems. The plow-down of organic amendments

Linking root traits to nutrient foraging in arbuscular mycorrhizal trees in a temperate forest.

Science.gov (United States)

Eissenstat, David M; Kucharski, Joshua M; Zadworny, Marcin; Adams, Thomas S; Koide, Roger T

2015-10-01

The identification of plant functional traits that can be linked to ecosystem processes is of wide interest, especially for predicting vegetational responses to climate change. Root diameter of the finest absorptive roots may be one plant trait that has wide significance. Do species with relatively thick absorptive roots forage in nutrient-rich patches differently from species with relatively fine absorptive roots? We measured traits related to nutrient foraging (root morphology and architecture, root proliferation, and mycorrhizal colonization) across six coexisting arbuscular mycorrhizal (AM) temperate tree species with and without nutrient addition. Root traits such as root diameter and specific root length were highly correlated with root branching intensity, with thin-root species having higher branching intensity than thick-root species. In both fertilized and unfertilized soil, species with thin absorptive roots and high branching intensity showed much greater root length and mass proliferation but lower mycorrhizal colonization than species with thick absorptive roots. Across all species, fertilization led to increased root proliferation and reduced mycorrhizal colonization. These results suggest that thin-root species forage more by root proliferation, whereas thick-root species forage more by mycorrhizal fungi. In mineral nutrient-rich patches, AM trees seem to forage more by proliferating roots than by mycorrhizal fungi. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Cultivated method of short root american ginseng

International Nuclear Information System (INIS)

Chen Guang; Yuan Yuchun; Jia Zhifa; Suo Binhua

1998-01-01

The distribution rate of 14 C assimilated material and root vitality of two years old American ginseng at green seed stage were measured. An exploratory research was made by cutting part of main root and spraying ABT on leaves of American ginseng. The results show that with cutting part of main root out before transplant and then sticking them in the seed bed, the plant develop and grow normally and the lateral and fibrous roots grow well. Spraying ABT on leaves of the plant at seed forming stage accelerate the transfer of assimilated material to the root and enhance the root vitality, especially the lateral root vitality. It is considered that cutting part of main root out is major method and spraying ABT on leaves is a supplementary measurement

How far is the root apex of a unilateral impacted canine from the root apices' arch form?

Science.gov (United States)

Kim, Sung-Hun; Kim, You-Min; Oh, Sewoong; Kim, Seong-Sik; Park, Soo-Byung; Son, Woo-Sung; Kim, Yong-Il

2017-02-01

The purpose of this study was to determine the arch form of the root apices of normally erupting teeth and then determine the differences in the location of the apex of impacted canines relative to normally erupting canines. In addition, we sought to determine whether the labiopalatal position of the impacted canines influences the position of the apices. The study included 21 patients with unerupted canines that subsequently had a normal eruption, 21 patients with palatally impacted canines, 27 patients with labially impacted canines, and 17 patients with midalveolus impacted canines. Images were obtained using cone beam computed tomography, and the x, y, and z coordinates of the root apices were determined using Ondemand3D software (Cybermed Co., Seoul, Korea). Two-dimensional coordinates were converted from acquired 3-dimensional coordinates via projection on a palatal plane, and the Procrustes method was used to process the converted 2-dimensional coordinates and to draw the arch forms of the root apices. Finally, we measured the extent of root apex deviation from the arch forms of the root apices. Normally erupting canines showed that even though calcifications may be immature, their positions were aligned with a normal arch form. The root apices of the impacted canines were an average of 6.572 mm away from the root apices' arch form, whereas those of the contralateral nonimpacted canines were an average distance of 2.221 mm away, a statistically significant difference. The palatally impacted canines' root apices distribution tended toward the first premolar root apices. Incompletely calcified, unerupted teeth with a subsequent normal eruption showed a normal arch form of the root apices. The root apices of impacted canines were farther from the arch forms than were the nonimpacted canines. Also, the root apices of impacted canines in the palatal area showed distributions different from those of the other impacted canine groups. Copyright © 2017 American

Genetic analysis reveals efficient sexual spore dispersal at a fine spatial scale in Armillaria ostoyae, the causal agent of root-rot disease in conifers

OpenAIRE

Capedevielle, Xavier; Lung, Brigitte; Labbé, Frédéric; Dutech, Cyril; Lung-Escarmant, Brigitte

2017-01-01

Armillaria ostoyae (sometimes named A. solidipes) is a fungal species causing root diseases in numerous coniferous forests of the northern hemisphere. The importance of sexual spores for the establishment of new disease centers remains unclear, particularly in the large maritime pine plantations of southwestern France. An analysis of the genetic diversity of a local fungal population distributed over 500 ha in this French forest showed genetic recombination between genotypes to be frequent, c...

Root systems and soil microbial biomass under no-tillage system

Directory of Open Access Journals (Sweden)

Venzke Filho Solismar de Paiva

2004-01-01

Full Text Available Some root parameters such as distribution, length, diameter and dry matter are inherent to plant species. Roots can influence microbial population during vegetative cycle through the rhizodeposits and, after senescence, integrating the soil organic matter pool. Since they represent labile substrates, especially regarding nitrogen, they can determine the rate of nutrient availability to the next crop cultivated under no-tillage (NT. The root systems of two crop species: maize (Zea mays L. cultivar Cargill 909 and soybean [Glycine max (L. Merr.] cultivar Embrapa 59, were compared in the field, and their influence on spatial distribution of the microbial C and N in a clayey-textured Typic Hapludox cultivated for 22 years under NT, at Tibagi, State of Paraná (PR, Brazil, was determined. Digital image processing and nail-plate techniques were used to evaluate 40 plots of a 80 ´ 50 ´ 3 cm soil profile. It was observed that 36% and 30% of the maize and soybeans roots, respectively, are concentrated in the 0 to 10 cm soil layer. The percent distribution of root dry matter was similar for both crops. The maize roots presented a total of 1,324 kg C ha-1 and 58 kg N ha-1, with higher root dry matter density and more roots in decomposition in the upper soil layer, decreasing with depth. The soybean roots (392 kg C ha-1 and 21 kg N ha-1 showed higher number of thinner roots and higher density per length unity compared to the maize. The maize roots enhanced microbial-C down to deeper soil layers than did the soybean roots. The microbial N presented a better correlation with the concentration of thin active roots and with roots in decomposition or in indefinite shape, possibly because of higher concentration of C and N easily assimilated by soil microorganisms.

Tree-root control of shallow landslides

Science.gov (United States)

Cohen, Denis; Schwarz, Massimiliano

2017-08-01

Tree roots have long been recognized to increase slope stability by reinforcing the strength of soils. Slope stability models usually include the effects of roots by adding an apparent cohesion to the soil to simulate root strength. No model includes the combined effects of root distribution heterogeneity, stress-strain behavior of root reinforcement, or root strength in compression. Recent field observations, however, indicate that shallow landslide triggering mechanisms are characterized by differential deformation that indicates localized activation of zones in tension, compression, and shear in the soil. Here we describe a new model for slope stability that specifically considers these effects. The model is a strain-step discrete element model that reproduces the self-organized redistribution of forces on a slope during rainfall-triggered shallow landslides. We use a conceptual sigmoidal-shaped hillslope with a clearing in its center to explore the effects of tree size, spacing, weak zones, maximum root-size diameter, and different root strength configurations. Simulation results indicate that tree roots can stabilize slopes that would otherwise fail without them and, in general, higher root density with higher root reinforcement results in a more stable slope. The variation in root stiffness with diameter can, in some cases, invert this relationship. Root tension provides more resistance to failure than root compression but roots with both tension and compression offer the best resistance to failure. Lateral (slope-parallel) tension can be important in cases when the magnitude of this force is comparable to the slope-perpendicular tensile force. In this case, lateral forces can bring to failure tree-covered areas with high root reinforcement. Slope failure occurs when downslope soil compression reaches the soil maximum strength. When this occurs depends on the amount of root tension upslope in both the slope-perpendicular and slope-parallel directions. Roots

INDEPENDENT AND CONTRASTING EFFECTS OF ELEVATED CO2 AND N-FERTILIZATION ROOT ARCHITECTURE

Science.gov (United States)

The effects of elevated CO2 and N fertilization on architecture of Pinus ponderosa fine roots and their associated mycorrhizal symbionts were measured over a 4-year period. The study was conducted in open-top field-exposure chambers located near Placerville, CA. A replicated (thr...

ROLE OF CARBOHYDRATE SUPPLY IN WHITE AND BROWN ROOT RESPIRATION OF PONDEROSA PINE

Science.gov (United States)

Respiratory responses of fine ponderosa pine (Pinus ponderosa Laws) roots of differing morphology were measured to evaluate response to excision and to changes in the shoot light environment. Ponderosa pine seedlings were subject to either a 15:9 h light/dark environment over 24...

Nitrogen Ion Form and Spatio-temporal Variation in Root Distribution Mediate Nitrogen Effects on Lifespan of Ectomycorrhizal Roots

Science.gov (United States)

Kou, L.; McCormack, M. L.; Chen, W.; Guo, D.; Wang, H.; Li, S.; Gao, W.; Yang, H.

2017-12-01

Background and Aims Absorptive roots active in soil resource uptake are often intimately associated with mycorrhizal fungi, yet it remains unclear how nitrogen (N) loading affects lifespan of absorptive roots associating with ectomycorrhizal (ECM) fungi. Methods Through a three-year minirhizotron experiment, we investigated the responses of ECM lifespan to different rates of N addition and examined the roles of N ion form, rooting depth, seasonal root cohort, and ECM morphotype in mediating the N effects on ECM lifespan in a slash pine (Pinus elliottii) forest in subtropical China. Results High rates of NH4Cl significantly decreased foliar P concentrations and increased foliar N: P ratios, and mean ECM lifespan was negatively correlated to foliar P concentration. N additions generally increased the lifespan of most ectomycorrhizas, but the specific differences were context dependent. N rates and forms exerted significant positive effects on ECM lifespan with stronger effects occurring at high N rates and under ammonium N addition. N additions extended lifespan of ectomycorrhizas in shallower soil and born in spring and autumn, but shortened lifespan of ectomycorrhizas in deeper soil and born in summer and winter. N additions reduced lifespan of dichotomous ectomycorrhizas, but increased lifespan of coralloid ectomycorrhizas. Conclusions The increased ECM lifespan in response to N additions may primarily be driven by the persistent and aggravated P limitation to plants. Our findings highlight the importance of environmental contexts in controlling ECM lifespan and the need to consider potential differences among mycorrhizal morphotypes when studying N—lifespan relationships of absorptive roots in the context of N deposition.

Indications on continued nitrogen uptake in Scots pine roots after clear-felling

Energy Technology Data Exchange (ETDEWEB)

Albrektson, A.; Valinger, E.; Leijon, B.; Sjoegren, H.; Sonesson, J.

1997-11-01

A study was performed in a 150 years old Scots pine (Pinus sylvestris L.) stand situated on a sandy moor in northern Sweden. Two plots were to be compared, and in June 1993 one was clear-felled. Even if reduced with approximately 50%, a significant fine root (diameter < 2 mm) growth was noticed at least up to one year after the clear-felling. For medium roots (diameters 2-4 and 4-6 mm) nitrogen content in root-wood and root-bark samples from the clear-felling, as compared to the reference plot, were 30-50% higher two months after the clear-felling. The difference did not increase in later comparisons. N-content in bark and wood buttress did not differ during the period studied, except for a higher percentage in bark at the clear-felling after two summers. This was believed to be a result of decomposition. The results indicate a maintained physiological activity in the stump-root system of Scots pine at least for one year at this site. An active uptake of N in roots of cut trees may influence leaching after clear-felling, the forage value of roots, and root decomposition rate and also maintain root competition with standing trees after thinning. 40 refs, 1 fig, 2 tabs

Rhizobial infection in Adesmia bicolor (Fabaceae) roots.

Science.gov (United States)

Bianco, Luciana

2014-09-01

The native legume Adesmia bicolor shows nitrogen fixation efficiency via symbiosis with soil rhizobia. The infection mechanism by means of which rhizobia infect their roots has not been fully elucidated to date. Therefore, the purpose of the present study was to identify the infection mechanism in Adesmia bicolor roots. To this end, inoculated roots were processed following conventional methods as part of our root anatomy study, and the shape and distribution of root nodules were analyzed as well. Neither root hairs nor infection threads were observed in the root system, whereas infection sites-later forming nodules-were observed in the longitudinal sections. Nodules were found to form between the main root and the lateral roots. It can be concluded that in Adesmia bicolor, a bacterial crack entry infection mechanism prevails and that such mechanism could be an adaptive strategy of this species which is typical of arid environments.

Deep rooting conferred by DEEPER ROOTING 1 enhances rice yield in paddy fields.

Science.gov (United States)

Arai-Sanoh, Yumiko; Takai, Toshiyuki; Yoshinaga, Satoshi; Nakano, Hiroshi; Kojima, Mikiko; Sakakibara, Hitoshi; Kondo, Motohiko; Uga, Yusaku

2014-07-03

To clarify the effect of deep rooting on grain yield in rice (Oryza sativa L.) in an irrigated paddy field with or without fertilizer, we used the shallow-rooting IR64 and the deep-rooting Dro1-NIL (a near-isogenic line homozygous for the Kinandang Patong allele of DEEPER ROOTING 1 (DRO1) in the IR64 genetic background). Although total root length was similar in both lines, more roots were distributed within the lower soil layer of the paddy field in Dro1-NIL than in IR64, irrespective of fertilizer treatment. At maturity, Dro1-NIL showed approximately 10% higher grain yield than IR64, irrespective of fertilizer treatment. Higher grain yield of Dro1-NIL was mainly due to the increased 1000-kernel weight and increased percentage of ripened grains, which resulted in a higher harvest index. After heading, the uptake of nitrogen from soil and leaf nitrogen concentration were higher in Dro1-NIL than in IR64. At the mid-grain-filling stage, Dro1-NIL maintained higher cytokinin fluxes from roots to shoots than IR64. These results suggest that deep rooting by DRO1 enhances nitrogen uptake and cytokinin fluxes at late stages, resulting in better grain filling in Dro1-NIL in a paddy field in this study.

Characterization of road runoff with regard to seasonal variations, particle size distribution and the correlation of fine particles and pollutants.

Science.gov (United States)

Hilliges, R; Endres, M; Tiffert, A; Brenner, E; Marks, T

2017-03-01

Urban runoff is known to transport a significant pollutant load consisting of e.g. heavy metals, salts and hydrocarbons. Interactions between solid and dissolved compounds, proper understanding of particle size distribution, dissolved pollutant fractions and seasonal variations is crucial for the selection and development of appropriate road runoff treatment devices. Road runoff at an arterial road in Augsburg, Germany, has been studied for 3.5 years. A strong seasonal variation was observed, with increased heavy metal concentrations with doubled and tripled median concentrations for heavy metals during the cold season. Correlation analysis showed that de-icing salt is not the only factor responsible for increased pollutant concentrations in winter. During the cold period, the fraction of dissolved metals was lower compared to the warm season. In road dust, the highest metal concentrations were measured for fine particles. Metals in road runoff were found to show a significant correlation to fine particles SS63 (removal rates.

Quantifying root-reinforcement of river bank soils by four Australian tree species

Science.gov (United States)

Docker, B. B.; Hubble, T. C. T.

2008-08-01

The increased shear resistance of soil due to root-reinforcement by four common Australian riparian trees, Casuarina glauca, Eucalyptus amplifolia, Eucalyptus elata and Acacia floribunda, was determined in-situ with a field shear-box. Root pull-out strengths and root tensile-strengths were also measured and used to evaluate the utility of the root-reinforcement estimation models that assume simultaneous failure of all roots at the shear plane. Field shear-box results indicate that tree roots fail progressively rather than simultaneously. Shear-strengths calculated for root-reinforced soil assuming simultaneous root failure, yielded values between 50% and 215% higher than directly measured shear-strengths. The magnitude of the overestimate varies among species and probably results from differences in both the geometry of the root-system and tensile strengths of the root material. Soil blocks under A. floribunda which presents many, well-spread, highly-branched fine roots with relatively higher tensile strength, conformed most closely with root model estimates; whereas E. amplifolia, which presents a few, large, unbranched vertical roots, concentrated directly beneath the tree stem and of relatively low tensile strength, deviated furthest from model-estimated shear-strengths. These results suggest that considerable caution be exercised when applying estimates of increased shear-strength due to root-reinforcement in riverbank stability modelling. Nevertheless, increased soil shear strength provided by tree roots can be calculated by knowledge of the Root Area Ratio ( RAR) at the shear plane. At equivalent RAR values, A. floribunda demonstrated the greatest earth reinforcement potential of the four species studied.

Characterizing root activity of guava trees by radiotracer technique

International Nuclear Information System (INIS)

Purohit, A.G.; Mukherjee, S.K.

1974-01-01

The distribution pattern of root activity of 12-year-old trees of guava (Psidium guajava L.) was determined by radiotracer technique. 32 P soloution was injected into the soil at lateral distances of 120, 240 and 360 cm from the tree trunk at depths of 15,30,60 and 90 cm. The 32 P uptake by the tree was determined by leaf analysis. In the rainy season the root activity or 32 P uptake was greater near the soil surface and midway between the trunk and the drip-line. The root activity decreased with an increase in the depth and distance from trunk. These results compared well with the actual distribution of feeder roots as determined by the soil-auger method. In summer the roots near the surface become less active in 32 P absorption with a drcrease in surface soil moisture. A decrease in the root activity in the surface soil was accompanied by an increase in 32 P uptake from lower depths. (author)

Differential spatial expression of A- and B-type CDKs, and distribution of auxins and cytokinins in the open transverse root apical meristem of Cucurbita maxima.

Science.gov (United States)

Chiappetta, Adriana; Bruno, Leonardo; Salimonti, Amelia; Muto, Antonella; Jones, Jessica; Rogers, Hilary J; Francis, Dennis; Bitonti, Maria Beatrice

2011-05-01

Aside from those on Arabidopsis, very few studies have focused on spatial expression of cyclin-dependent kinases (CDKs) in root apical meristems (RAMs), and, indeed, none has been undertaken for open meristems. The extent of interfacing between cell cycle genes and plant growth regulators is also an increasingly important issue in plant cell cycle studies. Here spatial expression/localization of an A-type and B-type CDK, auxin and cytokinins are reported in relation to the hitherto unexplored anatomy of RAMs of Cucurbita maxima. Median longitudinal sections were cut from 1-cm-long primary root tips of C. maxima. Full-length A-type CDKs and a B-type CDK were cloned from C. maxima using degenerate primers, probes of which were localized on sections of RAMs using in situ hybridization. Isopentenyladenine (iPA), trans-zeatin (t-Z) and indole-3yl-acetic acid (IAA) were identified on sections by immunolocalization. The C. cucurbita RAM conformed to an open transverse (OT) meristem typified by an absence of a clear boundary between the eumeristem and root cap columella, but with a distinctive longitudinally thickened epidermis. Cucma;CDKA;1 expression was detected strongly in the longitudinally thickened epidermis, a tissue with mitotic competence that contributes cells radially to the root cap of OT meristems. Cucma;CDKB2 was expressed mainly in proliferative regions of the RAM and in lateral root primordia. iPA and t-Z were mainly distributed in differentiated cells whilst IAA was distributed more uniformly in all tissues of the RAM. Cucma;CDKA;1 was expressed most strongly in cells that have proliferative competence whereas Cucma;CDKB2 was confined mainly to mitotic cells. iPA and t-Z marked differentiated cells in the RAM, consistent with the known effect of cytokinins in promoting differentiation in root systems. iPA/t-Z were distributed in a converse pattern to Cucma;CDKB2 expression whereas IAA was detected in most cells in the RAM regardless of their proliferative

A conceptual approach to approximate tree root architecture in infinite slope models

Science.gov (United States)

Schmaltz, Elmar; Glade, Thomas

2016-04-01

Vegetation-related properties - particularly tree root distribution and coherent hydrologic and mechanical effects on the underlying soil mantle - are commonly not considered in infinite slope models. Indeed, from a geotechnical point of view, these effects appear to be difficult to be reproduced reliably in a physically-based modelling approach. The growth of a tree and the expansion of its root architecture are directly connected with both intrinsic properties such as species and age, and extrinsic factors like topography, availability of nutrients, climate and soil type. These parameters control four main issues of the tree root architecture: 1) Type of rooting; 2) maximum growing distance to the tree stem (radius r); 3) maximum growing depth (height h); and 4) potential deformation of the root system. Geometric solids are able to approximate the distribution of a tree root system. The objective of this paper is to investigate whether it is possible to implement root systems and the connected hydrological and mechanical attributes sufficiently in a 3-dimensional slope stability model. Hereby, a spatio-dynamic vegetation module should cope with the demands of performance, computation time and significance. However, in this presentation, we focus only on the distribution of roots. The assumption is that the horizontal root distribution around a tree stem on a 2-dimensional plane can be described by a circle with the stem located at the centroid and a distinct radius r that is dependent on age and species. We classified three main types of tree root systems and reproduced the species-age-related root distribution with three respective mathematical solids in a synthetic 3-dimensional hillslope ambience. Thus, two solids in an Euclidian space were distinguished to represent the three root systems: i) cylinders with radius r and height h, whilst the dimension of latter defines the shape of a taproot-system or a shallow-root-system respectively; ii) elliptic

Measurements of water uptake of maize roots: the key function of lateral roots

Science.gov (United States)

Ahmed, M. A.; Zarebanadkouki, M.; Kroener, E.; Kaestner, A.; Carminati, A.

2014-12-01

Maize (Zea mays L.) is one of the most important crop worldwide. Despite its importance, there is limited information on the function of different root segments and root types of maize in extracting water from soils. Therefore, the aim of this study was to investigate locations of root water uptake in maize. We used neutron radiography to: 1) image the spatial distribution of maize roots in soil and 2) trace the transport of injected deuterated water (D2O) in soil and roots. Maizes were grown in aluminum containers (40×38×1 cm) filled with a sandy soil. When the plants were 16 days old, we injected D2O into selected soil regions containing primary, seminal and lateral roots. The experiments were performed during the day (transpiring plants) and night (not transpiring plants). The transport of D2O into roots was simulated using a new convection-diffusion numerical model of D2O transport into roots. By fitting the observed D2O transport we quantified the diffusional permeability and the water uptake of the different root segments. The maize root architecture consisted of a primary root, 4-5 seminal roots and many lateral roots connected to the primary and seminal roots. Laterals emerged from the proximal 15 cm of the primary and seminal roots. Water uptake occurred primarily in lateral roots. Lateral roots had the highest diffusional permeability (9.4×10-7), which was around six times higher that the diffusional permeability of the old seminal segments (1.4×10-7), and two times higher than the diffusional permeability of the young seminal segments (4.7×10-7). The radial flow of D2O into the lateral (6.7×10-5 ) was much higher than in the young seminal roots (1.1×10-12). The radial flow of D2O into the old seminal was negligible. We concluded that the function of the primary and seminal roots was to collect water from the lateral roots and transport it to the shoot. A maize root system with lateral roots branching from deep primary and seminal roots would be

Tree-root control of shallow landslides

Directory of Open Access Journals (Sweden)

D. Cohen

2017-08-01

Full Text Available Tree roots have long been recognized to increase slope stability by reinforcing the strength of soils. Slope stability models usually include the effects of roots by adding an apparent cohesion to the soil to simulate root strength. No model includes the combined effects of root distribution heterogeneity, stress-strain behavior of root reinforcement, or root strength in compression. Recent field observations, however, indicate that shallow landslide triggering mechanisms are characterized by differential deformation that indicates localized activation of zones in tension, compression, and shear in the soil. Here we describe a new model for slope stability that specifically considers these effects. The model is a strain-step discrete element model that reproduces the self-organized redistribution of forces on a slope during rainfall-triggered shallow landslides. We use a conceptual sigmoidal-shaped hillslope with a clearing in its center to explore the effects of tree size, spacing, weak zones, maximum root-size diameter, and different root strength configurations. Simulation results indicate that tree roots can stabilize slopes that would otherwise fail without them and, in general, higher root density with higher root reinforcement results in a more stable slope. The variation in root stiffness with diameter can, in some cases, invert this relationship. Root tension provides more resistance to failure than root compression but roots with both tension and compression offer the best resistance to failure. Lateral (slope-parallel tension can be important in cases when the magnitude of this force is comparable to the slope-perpendicular tensile force. In this case, lateral forces can bring to failure tree-covered areas with high root reinforcement. Slope failure occurs when downslope soil compression reaches the soil maximum strength. When this occurs depends on the amount of root tension upslope in both the slope-perpendicular and slope

Use of spatially distributed time-integrated sediment sampling networks and distributed fine sediment modelling to inform catchment management.

Science.gov (United States)

Perks, M T; Warburton, J; Bracken, L J; Reaney, S M; Emery, S B; Hirst, S

2017-11-01

Under the EU Water Framework Directive, suspended sediment is omitted from environmental quality standards and compliance targets. This omission is partly explained by difficulties in assessing the complex dose-response of ecological communities. But equally, it is hindered by a lack of spatially distributed estimates of suspended sediment variability across catchments. In this paper, we demonstrate the inability of traditional, discrete sampling campaigns for assessing exposure to fine sediment. Sampling frequencies based on Environmental Quality Standard protocols, whilst reflecting typical manual sampling constraints, are unable to determine the magnitude of sediment exposure with an acceptable level of precision. Deviations from actual concentrations range between -35 and +20% based on the interquartile range of simulations. As an alternative, we assess the value of low-cost, suspended sediment sampling networks for quantifying suspended sediment transfer (SST). In this study of the 362 km 2 upland Esk catchment we observe that spatial patterns of sediment flux are consistent over the two year monitoring period across a network of 17 monitoring sites. This enables the key contributing sub-catchments of Butter Beck (SST: 1141 t km 2 yr -1 ) and Glaisdale Beck (SST: 841 t km 2 yr -1 ) to be identified. The time-integrated samplers offer a feasible alternative to traditional infrequent and discrete sampling approaches for assessing spatio-temporal changes in contamination. In conjunction with a spatially distributed diffuse pollution model (SCIMAP), time-integrated sediment sampling is an effective means of identifying critical sediment source areas in the catchment, which can better inform sediment management strategies for pollution prevention and control. Copyright © 2017 Elsevier Ltd. All rights reserved.

Accumulation and distribution of dry matter in relation to root yield of ...

African Journals Online (AJOL)

STORAGESEVER

2009-10-05

Oct 5, 2009 ... Cassava an important staple food is grown both in upland and inland valley in the tropics. A trial to ... high dry matter also produce high leaf area index and root yield ..... Proportion (%) of DM accumulated in root stock.

Interaction of fine sediment with alluvial streambeds

Science.gov (United States)

Jobson, Harvey E.; Carey, William P.

1989-01-01

More knowledge is needed about the physical processes that control the transport of fine sediment moving over an alluvial bed. The knowledge is needed to design rational sampling and monitoring programs that assess the transport and fate of toxic substances in surface waters because the toxics are often associated with silt- and clay-sized particles. This technical note reviews some of the past research in areas that may contribute to an increased understanding of the processes involved. An alluvial streambed can have a large capacity to store fine sediments that are extracted from the flow when instream concentrations are high and it can gradually release fine sediment to the flow when the instream concentrations are low. Several types of storage mechanisms are available depending on the relative size distribution of the suspended load and bed material, as well as the flow hydraulics. Alluvial flow tends to segregate the deposited material according to size and density. Some of the storage locations are temporary, but some can store the fine sediment for very long periods of time.