Sample records for explicit finite-difference code

  1. Numerical stability of an explicit finite difference scheme for the solution of transient conduction in composite media (United States)

    Campbell, W.


    A theoretical evaluation of the stability of an explicit finite difference solution of the transient temperature field in a composite medium is presented. The grid points of the field are assumed uniformly spaced, and media interfaces are either vertical or horizontal and pass through grid points. In addition, perfect contact between different media (infinite interfacial conductance) is assumed. A finite difference form of the conduction equation is not valid at media interfaces; therefore, heat balance forms are derived. These equations were subjected to stability analysis, and a computer graphics code was developed that permitted determination of a maximum time step for a given grid spacing.

  2. Visualization of elastic wavefields computed with a finite difference code

    Energy Technology Data Exchange (ETDEWEB)

    Larsen, S. [Lawrence Livermore National Lab., CA (United States); Harris, D.


    The authors have developed a finite difference elastic propagation model to simulate seismic wave propagation through geophysically complex regions. To facilitate debugging and to assist seismologists in interpreting the seismograms generated by the code, they have developed an X Windows interface that permits viewing of successive temporal snapshots of the (2D) wavefield as they are calculated. The authors present a brief video displaying the generation of seismic waves by an explosive source on a continent, which propagate to the edge of the continent then convert to two types of acoustic waves. This sample calculation was part of an effort to study the potential of offshore hydroacoustic systems to monitor seismic events occurring onshore.

  3. Explicit finite difference predictor and convex corrector with applications to hyperbolic partial differential equations (United States)

    Dey, C.; Dey, S. K.


    An explicit finite difference scheme consisting of a predictor and a corrector has been developed and applied to solve some hyperbolic partial differential equations (PDEs). The corrector is a convex-type function which is applied at each time level and at each mesh point. It consists of a parameter which may be estimated such that for larger time steps the algorithm should remain stable and generate a fast speed of convergence to the steady-state solution. Some examples have been given.

  4. Explicit finite-difference simulation of optical integrated devices on massive parallel computers. (United States)

    Sterkenburgh, T; Michels, R M; Dress, P; Franke, H


    An explicit method for the numerical simulation of optical integrated circuits by means of the finite-difference time-domain (FDTD) method is presented. This method, based on an explicit solution of Maxwell's equations, is well established in microwave technology. Although the simulation areas are small, we verified the behavior of three interesting problems, especially nonparaxial problems, with typical aspects of integrated optical devices. Because numerical losses are within acceptable limits, we suggest the use of the FDTD method to achieve promising quantitative simulation results.


    Directory of Open Access Journals (Sweden)

    Nuraini Nuraini


    Full Text Available Abstract. Modeling the dynamics of seawater typically uses a shallow water model. The shallow water model is derived from the mass conservation equation and the momentum set into shallow water equations. A two-dimensional shallow water equation alongside the model that is integrated with depth is described in numerical form. This equation can be solved by finite different methods either explicitly or implicitly. In this modeling, the two dimensional shallow water equations are described in discrete form using explicit schemes. Keyword: shallow water equation, finite difference and schema explisit. REFERENSI  1. Bunya, S., Westerink, J. J. dan Yoshimura. 2005. Discontinuous Boundary Implementation for the Shallow Water Equations. Int. J. Numer. Meth. Fluids. 47: 1451-1468. 2. Kampf Jochen. 2009. Ocean Modelling For Beginners. Springer Heidelberg Dordrecht. London New York. 3. Rezolla, L 2011. Numerical Methods for the Solution of Partial Diferential Equations. Trieste. International Schoolfor Advanced Studies. 4. Natakussumah, K. D., Kusuma, S. B. M., Darmawan, H., Adityawan, B. M. Dan  Farid, M. 2007. Pemodelan Hubungan Hujan dan Aliran Permukaan pada Suatu DAS  dengan Metode Beda Hingga. ITB Sain dan Tek. 39: 97-123. 5. Casulli, V. dan Walters, A. R. 2000. An unstructured grid, three-dimensional model based on the shallow water equations. Int. J. Numer. Meth. Fluids. 32: 331-348. 6. Triatmodjo, B. 2002. Metode Numerik  Beta Offset. Yogyakarta.

  6. Thermal Analysis of Ball screw Systems by Explicit Finite Difference Method

    Energy Technology Data Exchange (ETDEWEB)

    Min, Bog Ki [Hanyang Univ., Seoul (Korea, Republic of); Park, Chun Hong; Chung, Sung Chong [KIMM, Daejeon (Korea, Republic of)


    Friction generated from balls and grooves incurs temperature rise in the ball screw system. Thermal deformation due to the heat degrades positioning accuracy of the feed drive system. To compensate for the thermal error, accurate prediction of the temperature distribution is required first. In this paper, to predict the temperature distribution according to the rotational speed, solid and hollow cylinders are applied for analysis of the ball screw shaft and nut, respectively. Boundary conditions such as the convective heat transfer coefficient, friction torque, and thermal contact conductance (TCC) between balls and grooves are formulated according to operating and fabrication conditions of the ball screw. Explicit FDM (finite difference method) is studied for development of a temperature prediction simulator. Its effectiveness is verified through numerical analysis.

  7. An Efficient Explicit Finite-Difference Scheme for Simulating Coupled Biomass Growth on Nutritive Substrates

    Directory of Open Access Journals (Sweden)

    G. F. Sun


    Full Text Available A novel explicit finite-difference (FD method is presented to simulate the positive and bounded development process of a microbial colony subjected to a substrate of nutrients, which is governed by a nonlinear parabolic partial differential equations (PDE system. Our explicit FD scheme is uniquely designed in such a way that it transfers the nonlinear terms in the original PDE into discrete sets of linear ones in the algebraic equation system that can be solved very efficiently, while ensuring the stability and the boundedness of the solution. This is achieved through (1 a proper design of intertwined FD approximations for the diffusion function term in both time and spatial variations and (2 the control of the time-step through establishing theoretical stability criteria. A detailed theoretical stability analysis is conducted to reveal that our FD method is indeed stable. Our examples verified the fact that the numerical solution can be ensured nonnegative and bounded to simulate the actual physics. Numerical examples have also been presented to demonstrate the efficiency of the proposed scheme. The present scheme is applicable for solving similar systems of PDEs in the investigation of the dynamics of biological films.

  8. Solutions of the Taylor-Green Vortex Problem Using High-Resolution Explicit Finite Difference Methods (United States)

    DeBonis, James R.


    A computational fluid dynamics code that solves the compressible Navier-Stokes equations was applied to the Taylor-Green vortex problem to examine the code s ability to accurately simulate the vortex decay and subsequent turbulence. The code, WRLES (Wave Resolving Large-Eddy Simulation), uses explicit central-differencing to compute the spatial derivatives and explicit Low Dispersion Runge-Kutta methods for the temporal discretization. The flow was first studied and characterized using Bogey & Bailley s 13-point dispersion relation preserving (DRP) scheme. The kinetic energy dissipation rate, computed both directly and from the enstrophy field, vorticity contours, and the energy spectra are examined. Results are in excellent agreement with a reference solution obtained using a spectral method and provide insight into computations of turbulent flows. In addition the following studies were performed: a comparison of 4th-, 8th-, 12th- and DRP spatial differencing schemes, the effect of the solution filtering on the results, the effect of large-eddy simulation sub-grid scale models, and the effect of high-order discretization of the viscous terms.

  9. Hexagonal vs. Rectilinear Grids for Explicit Finite Difference Schemes for the Two-dimensional Wave Equation


    Hamilton, Brian; Bilbao, Stefan


    Finite difference schemes for the 2-D wave equation operating on hexagonal grids and the accompanyingnumerical dispersion properties have received little attention in comparison to schemes operating on rectilinear grids. This paper considers the hexagonal tiling of the wavenumber plane in order to show that thehexagonal grid is a more natural choice to emulate the isotropy of the Laplacian operator and the wave equation. Performance of the 7-point scheme on a hexagonal grid is better than pre...

  10. Spatial Parallelism of a 3D Finite Difference, Velocity-Stress Elastic Wave Propagation Code

    Energy Technology Data Exchange (ETDEWEB)



    Finite difference methods for solving the wave equation more accurately capture the physics of waves propagating through the earth than asymptotic solution methods. Unfortunately. finite difference simulations for 3D elastic wave propagation are expensive. We model waves in a 3D isotropic elastic earth. The wave equation solution consists of three velocity components and six stresses. The partial derivatives are discretized using 2nd-order in time and 4th-order in space staggered finite difference operators. Staggered schemes allow one to obtain additional accuracy (via centered finite differences) without requiring additional storage. The serial code is most unique in its ability to model a number of different types of seismic sources. The parallel implementation uses the MP1 library, thus allowing for portability between platforms. Spatial parallelism provides a highly efficient strategy for parallelizing finite difference simulations. In this implementation, one can decompose the global problem domain into one-, two-, and three-dimensional processor decompositions with 3D decompositions generally producing the best parallel speed up. Because i/o is handled largely outside of the time-step loop (the most expensive part of the simulation) we have opted for straight-forward broadcast and reduce operations to handle i/o. The majority of the communication in the code consists of passing subdomain face information to neighboring processors for use as ''ghost cells''. When this communication is balanced against computation by allocating subdomains of reasonable size, we observe excellent scaled speed up. Allocating subdomains of size 25 x 25 x 25 on each node, we achieve efficiencies of 94% on 128 processors. Numerical examples for both a layered earth model and a homogeneous medium with a high-velocity blocky inclusion illustrate the accuracy of the parallel code.

  11. Explicit solvers in an implicit code (United States)

    Martinez Montesinos, Beatriz; Kaus, Boris J. P.; Popov, Anton


    Many geodynamic processes occur over long timescales (millions of years), and are best solved with implicit solvers. Yet, some processes, such as hydrofracking, or wave propagation, occur over smaller timescales. In those cases, it might be advantageous to use an explicit rather than an implicit approach as it requires significantly less memory and computational costs. Here, we discuss our ongoing work to include explicit solvers in the parallel software package LaMEM (Lithosphere and Mantle Evolution Model). As a first step, we focus on modelling seismic wave propagation in heterogeneous 3D poro-elasto-plastic models. To do that, we add inertial terms to the momentum equations as well as elastic compressibility to the mass conservation equations in an explicit way using the staggered grid finite difference discretization method. Results are similar to that of existing wave propagation codes and are capable to simulate wave propagation in heterogeneous media. To simulate geomechanical problems, timestep restrictions posed by the seismic wave speed are usually too severe to allow simulating deformation on a timescale of months-years. The classical (FLAC) method introduces a mass-density scaling in which a non-physical (larger) density is employed in the momentum equations. We will discuss how this method fits simple benchmarks for elastic and elastoplastic deformation. As an application, we use the code to model different complex media subject to compression and we investigate how mass scaling influence in our results.

  12. WONDY V: a one-dimensional finite-difference wave-propagation code

    Energy Technology Data Exchange (ETDEWEB)

    Kipp, M.E.; Lawrence, R.J.


    WONDY V solves the finite difference analogs to the Lagrangian equations of motion in one spatial dimension (planar, cylindrical, or spherical). Simulations of explosive detonation, energy deposition, plate impact, and dynamic fracture are possible, using a variety of existing material models. In addition, WONDY has proven to be a powerful tool in the evaluation of new constitutive models. A preprocessor is available to allocate storage arrays commensurate with problem size, and automatic rezoning may be employed to improve resolution. This document provides a description of the equations solved, available material models, operating instructions, and sample problems.

  13. Three-Dimensional Sound Field Analysis Using Compact Explicit-Finite Difference Time Domain Method with Graphics Processing Unit Cluster System (United States)

    Ishii, Takuto; Tsuchiya, Takao; Okubo, Kan


    In this study, the compact explicit-finite difference time domain (CE-FDTD) method is applied to the three-dimensional sound field analysis to reduce computer resources. There are various derivative schemes in the CE-FDTD method. They are first examined theoretically to evaluate the numerical accuracy. As a theoretical result, it is found that the interpolated wide band (IWB) scheme has the widest bandwidth in which the cut-off frequency is in agreement with the Nyquist frequency. The calculation performance is theoretically estimated, then experimentally evaluated with the graphics processing unit cluster system. As a result, it is found that the memory usage of the IWB scheme is less than one-third of that of the standard leapfrog (SLF) scheme to achieve the same cut-off frequency. It is also found that the calculation time of the IWB scheme with the shared memory is about 19% compared with that of the SLF scheme with the graphics processing unit (GPU) cluster system. The impulse response is calculated for a large room with a volume capacity of about 4500 m3 in which the sampling rate was 40 kHz. It is confirmed that the three-dimensional sound field with the natural reverberation can be calculated by the IWB scheme.

  14. Numerical stability of finite difference algorithms for electrochemical kinetic simulations. Matrix stability analysis of the classic explicit, fully implicit and Crank-Nicolson methods, extended to the 3- and 4-point gradient approximation at the electrodes

    DEFF Research Database (Denmark)

    Bieniasz, Leslaw K.; Østerby, Ole; Britz, Dieter


    We extend the analysis of the stepwise numerical stability of the classic explicit, fully implicit and Crank-Nicolson finite difference algorithms for electrochemical kinetic simulations, to the multipoint gradient approximations at the electrode. The discussion is based on the matrix method...

  15. Explicit Finite-Difference Scheme for the Numerical Solution of the Model Equation of Nonlinear Hereditary Oscillator with Variable-Order Fractional Derivatives

    Directory of Open Access Journals (Sweden)

    Parovik Roman I.


    Full Text Available The paper deals with the model of variable-order nonlinear hereditary oscillator based on a numerical finite-difference scheme. Numerical experiments have been carried out to evaluate the stability and convergence of the difference scheme. It is argued that the approximation, stability and convergence are of the first order, while the scheme is stable and converges to the exact solution.

  16. Numerical stability of finite difference algorithms for electrochemical kinetic simulations: Matrix stability analysis of the classic explicit, fully implicit and Crank-Nicolson methods and typical problems involving mixed boundary conditions

    DEFF Research Database (Denmark)

    Bieniasz, Leslaw K.; Østerby, Ole; Britz, Dieter


    The stepwise numerical stability of the classic explicit, fully implicit and Crank-Nicolson finite difference discretizations of example diffusional initial boundary value problems from electrochemical kinetics has been investigated using the matrix method of stability analysis. Special attention...... has been paid to the effect of the discretization of the mixed, linear boundary condition with time-dependent coefficients on stability, assuming the two-point forward-difference approximations for the gradient at the left boundary (electrode). Under accepted assumptions one obtains the usual...... stability criteria for the classic explicit and fully implicit methods. The Crank-Nicolson method turns out to be only conditionally stable in contrast to the current thought regarding this method....

  17. HYDRA-I: a three-dimensional finite difference code for calculating the thermohydraulic performance of a fuel assembly contained within a canister

    Energy Technology Data Exchange (ETDEWEB)

    McCann, R.A.


    A finite difference computer code, named HYDRA-I, has been developed to simulate the three-dimensional performance of a spent fuel assembly contained within a cylindrical canister. The code accounts for the coupled heat transfer modes of conduction, convection, and radiation and permits spatially varying boundary conditions, thermophysical properties, and power generation rates. This document is intended as a manual for potential users of HYDRA-I. A brief discussion of the governing equations, the solution technique, and a detailed description of how to set up and execute a problem are presented. HYDRA-I is designed for operation on a CDC 7600 computer. An appendix is included that summarizes approximately two dozen different cases that have been examined. The cases encompass variations in fuel assembly and canister configurations, power generation rates, filler materials, and gases. The results presented show maximum and various local temperatures and heat fluxes illustrating the changing importance of the three heat transfer modes. Finally, the need for comparison with experimental data is emphasized as an aid in code verification although the limited data available indicate excellent agreement.

  18. A numerical scheme based on radial basis function finite difference (RBF-FD) technique for solving the high-dimensional nonlinear Schrödinger equations using an explicit time discretization: Runge-Kutta method (United States)

    Dehghan, Mehdi; Mohammadi, Vahid


    In this research, we investigate the numerical solution of nonlinear Schrödinger equations in two and three dimensions. The numerical meshless method which will be used here is RBF-FD technique. The main advantage of this method is the approximation of the required derivatives based on finite difference technique at each local-support domain as Ωi. At each Ωi, we require to solve a small linear system of algebraic equations with a conditionally positive definite matrix of order 1 (interpolation matrix). This scheme is efficient and its computational cost is same as the moving least squares (MLS) approximation. A challengeable issue is choosing suitable shape parameter for interpolation matrix in this way. In order to overcome this matter, an algorithm which was established by Sarra (2012), will be applied. This algorithm computes the condition number of the local interpolation matrix using the singular value decomposition (SVD) for obtaining the smallest and largest singular values of that matrix. Moreover, an explicit method based on Runge-Kutta formula of fourth-order accuracy will be applied for approximating the time variable. It also decreases the computational costs at each time step since we will not solve a nonlinear system. On the other hand, to compare RBF-FD method with another meshless technique, the moving kriging least squares (MKLS) approximation is considered for the studied model. Our results demonstrate the ability of the present approach for solving the applicable model which is investigated in the current research work.

  19. Integral and finite difference inequalities and applications

    CERN Document Server

    Pachpatte, B G


    The monograph is written with a view to provide basic tools for researchers working in Mathematical Analysis and Applications, concentrating on differential, integral and finite difference equations. It contains many inequalities which have only recently appeared in the literature and which can be used as powerful tools and will be a valuable source for a long time to come. It is self-contained and thus should be useful for those who are interested in learning or applying the inequalities with explicit estimates in their studies.- Contains a variety of inequalities discovered which find numero

  20. LaMEM: a massively parallel 3D staggered-grid finite-difference code for coupled nonlinear themo-mechanical modeling of lithospheric deformation with visco-elasto-plastic rheology (United States)

    Popov, Anton; Kaus, Boris


    This software project aims at bringing the 3D lithospheric deformation modeling to a qualitatively different level. Our code LaMEM (Lithosphere and Mantle Evolution Model) is based on the following building blocks: * Massively-parallel data-distributed implementation model based on PETSc library * Light, stable and accurate staggered-grid finite difference spatial discretization * Marker-in-Cell pedictor-corector time discretization with Runge-Kutta 4-th order * Elastic stress rotation algorithm based on the time integration of the vorticity pseudo-vector * Staircase-type internal free surface boundary condition without artificial viscosity contrast * Geodynamically relevant visco-elasto-plastic rheology * Global velocity-pressure-temperature Newton-Raphson nonlinear solver * Local nonlinear solver based on FZERO algorithm * Coupled velocity-pressure geometric multigrid preconditioner with Galerkin coarsening Staggered grid finite difference, being inherently Eulerian and rather complicated discretization method, provides no natural treatment of free surface boundary condition. The solution based on the quasi-viscous sticky-air phase introduces significant viscosity contrasts and spoils the convergence of the iterative solvers. In LaMEM we are currently implementing an approximate stair-case type of the free surface boundary condition which excludes the empty cells and restores the solver convergence. Because of the mutual dependence of the stress and strain-rate tensor components, and their different spatial locations in the grid, there is no straightforward way of implementing the nonlinear rheology. In LaMEM we have developed and implemented an efficient interpolation scheme for the second invariant of the strain-rate tensor, that solves this problem. Scalable efficient linear solvers are the key components of the successful nonlinear problem solution. In LaMEM we have a range of PETSc-based preconditioning techniques that either employ a block factorization of

  1. Implicit finite-difference simulations of seismic wave propagation

    KAUST Repository

    Chu, Chunlei


    We propose a new finite-difference modeling method, implicit both in space and in time, for the scalar wave equation. We use a three-level implicit splitting time integration method for the temporal derivative and implicit finite-difference operators of arbitrary order for the spatial derivatives. Both the implicit splitting time integration method and the implicit spatial finite-difference operators require solving systems of linear equations. We show that it is possible to merge these two sets of linear systems, one from implicit temporal discretizations and the other from implicit spatial discretizations, to reduce the amount of computations to develop a highly efficient and accurate seismic modeling algorithm. We give the complete derivations of the implicit splitting time integration method and the implicit spatial finite-difference operators, and present the resulting discretized formulas for the scalar wave equation. We conduct a thorough numerical analysis on grid dispersions of this new implicit modeling method. We show that implicit spatial finite-difference operators greatly improve the accuracy of the implicit splitting time integration simulation results with only a slight increase in computational time, compared with explicit spatial finite-difference operators. We further verify this conclusion by both 2D and 3D numerical examples. © 2012 Society of Exploration Geophysicists.

  2. An implicit finite-difference operator for the Helmholtz equation

    KAUST Repository

    Chu, Chunlei


    We have developed an implicit finite-difference operator for the Laplacian and applied it to solving the Helmholtz equation for computing the seismic responses in the frequency domain. This implicit operator can greatly improve the accuracy of the simulation results without adding significant extra computational cost, compared with the corresponding conventional explicit finite-difference scheme. We achieved this by taking advantage of the inherently implicit nature of the Helmholtz equation and merging together the two linear systems: one from the implicit finite-difference discretization of the Laplacian and the other from the discretization of the Helmholtz equation itself. The end result of this simple yet important merging manipulation is a single linear system, similar to the one resulting from the conventional explicit finite-difference discretizations, without involving any differentiation matrix inversions. We analyzed grid dispersions of the discrete Helmholtz equation to show the accuracy of this implicit finite-difference operator and used two numerical examples to demonstrate its efficiency. Our method can be extended to solve other frequency domain wave simulation problems straightforwardly. © 2012 Society of Exploration Geophysicists.

  3. Practical aspects of prestack depth migration with finite differences

    Energy Technology Data Exchange (ETDEWEB)

    Ober, C.C.; Oldfield, R.A.; Womble, D.E.; Romero, L.A. [Sandia National Labs., Albuquerque, NM (United States); Burch, C.C. [Conoco Inc. (United States)


    Finite-difference, prestack, depth migrations offers significant improvements over Kirchhoff methods in imaging near or under salt structures. The authors have implemented a finite-difference prestack depth migration algorithm for use on massively parallel computers which is discussed. The image quality of the finite-difference scheme has been investigated and suggested improvements are discussed. In this presentation, the authors discuss an implicit finite difference migration code, called Salvo, that has been developed through an ACTI (Advanced Computational Technology Initiative) joint project. This code is designed to be efficient on a variety of massively parallel computers. It takes advantage of both frequency and spatial parallelism as well as the use of nodes dedicated to data input/output (I/O). Besides giving an overview of the finite-difference algorithm and some of the parallelism techniques used, migration results using both Kirchhoff and finite-difference migration will be presented and compared. The authors start out with a very simple Cartoon model where one can intuitively see the multiple travel paths and some of the potential problems that will be encountered with Kirchhoff migration. More complex synthetic models as well as results from actual seismic data from the Gulf of Mexico will be shown.

  4. Comparisons of time explicit hybrid kinetic-fluid code Architect for Plasma Wakefield Acceleration with a full PIC code

    Energy Technology Data Exchange (ETDEWEB)

    Massimo, F., E-mail: [Laboratoire d' Optique Appliquée, ENSTA ParisTech, CNRS, École Polytechnique, Université Paris-Saclay, 828 bd des Maréchaux, 91762 Palaiseau (France); Dipartimento SBAI, Università di Roma “La Sapienza“, Via A. Scarpa 14, 00161 Roma (Italy); Atzeni, S. [Dipartimento SBAI, Università di Roma “La Sapienza“, Via A. Scarpa 14, 00161 Roma (Italy); Marocchino, A. [Dipartimento SBAI, Università di Roma “La Sapienza“, Via A. Scarpa 14, 00161 Roma (Italy); INFN – LNF, via Enrico Fermi 40, 00044 Frascati (Italy)


    Architect, a time explicit hybrid code designed to perform quick simulations for electron driven plasma wakefield acceleration, is described. In order to obtain beam quality acceptable for applications, control of the beam-plasma-dynamics is necessary. Particle in Cell (PIC) codes represent the state-of-the-art technique to investigate the underlying physics and possible experimental scenarios; however PIC codes demand the necessity of heavy computational resources. Architect code substantially reduces the need for computational resources by using a hybrid approach: relativistic electron bunches are treated kinetically as in a PIC code and the background plasma as a fluid. Cylindrical symmetry is assumed for the solution of the electromagnetic fields and fluid equations. In this paper both the underlying algorithms as well as a comparison with a fully three dimensional particle in cell code are reported. The comparison highlights the good agreement between the two models up to the weakly non-linear regimes. In highly non-linear regimes the two models only disagree in a localized region, where the plasma electrons expelled by the bunch close up at the end of the first plasma oscillation.

  5. Comparisons of time explicit hybrid kinetic-fluid code Architect for Plasma Wakefield Acceleration with a full PIC code (United States)

    Massimo, F.; Atzeni, S.; Marocchino, A.


    Architect, a time explicit hybrid code designed to perform quick simulations for electron driven plasma wakefield acceleration, is described. In order to obtain beam quality acceptable for applications, control of the beam-plasma-dynamics is necessary. Particle in Cell (PIC) codes represent the state-of-the-art technique to investigate the underlying physics and possible experimental scenarios; however PIC codes demand the necessity of heavy computational resources. Architect code substantially reduces the need for computational resources by using a hybrid approach: relativistic electron bunches are treated kinetically as in a PIC code and the background plasma as a fluid. Cylindrical symmetry is assumed for the solution of the electromagnetic fields and fluid equations. In this paper both the underlying algorithms as well as a comparison with a fully three dimensional particle in cell code are reported. The comparison highlights the good agreement between the two models up to the weakly non-linear regimes. In highly non-linear regimes the two models only disagree in a localized region, where the plasma electrons expelled by the bunch close up at the end of the first plasma oscillation.

  6. A finite difference Taylor series method applied to thermal problems (United States)

    Collins, R. L.


    A new technique has been developed for solving finite difference equations that approximate parabolic (transient) and elliptic (steady) partial differential equations for heat transfer problems. The approach utilizes a Taylor series method and a variable-weighted implicit finite difference approximation. The weighting function for each difference equation is determined from the power-law suggested by S. Patankar and B. Baliga. An automatic-time-step selection process has been incorporated to enhance the transient solution scheme. Both the transient and steady-state equation sets are solved iteratively. The Aitken extrapolation process is used to accelerate convergence to steady state. Although this solution process was developed for the SINDA thermal analyzer, application to other finite difference thermal analysis codes should be fairly straightforward. The potential of this new scheme is demonstrated by solving three transient and two steady-state heat transfer problems that involve conduction and radiation.

  7. A simple finite-difference scheme for handling topography with the second-order wave equation

    NARCIS (Netherlands)

    Mulder, W.A.


    The presence of topography poses a challenge for seismic modeling with finite-difference codes. The representation of topography by means of an air layer or vacuum often leads to a substantial loss of numerical accuracy. A suitable modification of the finite-difference weights near the free

  8. Electron-phonon coupling from finite differences. (United States)

    Monserrat, Bartomeu


    The interaction between electrons and phonons underlies multiple phenomena in physics, chemistry, and materials science. Examples include superconductivity, electronic transport, and the temperature dependence of optical spectra. A first-principles description of electron-phonon coupling enables the study of the above phenomena with accuracy and material specificity, which can be used to understand experiments and to predict novel effects and functionality. In this topical review, we describe the first-principles calculation of electron-phonon coupling from finite differences. The finite differences approach provides several advantages compared to alternative methods, in particular (i) any underlying electronic structure method can be used, and (ii) terms beyond the lowest order in the electron-phonon interaction can be readily incorporated. But these advantages are associated with a large computational cost that has until recently prevented the widespread adoption of this method. We describe some recent advances, including nondiagonal supercells and thermal lines, that resolve these difficulties, and make the calculation of electron-phonon coupling from finite differences a powerful tool. We review multiple applications of the calculation of electron-phonon coupling from finite differences, including the temperature dependence of optical spectra, superconductivity, charge transport, and the role of defects in semiconductors. These examples illustrate the advantages of finite differences, with cases where semilocal density functional theory is not appropriate for the calculation of electron-phonon coupling and many-body methods such as the $GW$ approximation are required, as well as examples in which higher-order terms in the electron-phonon interaction are essential for an accurate description of the relevant phenomena. We expect that the finite difference approach will play a central role in future studies of the electron-phonon interaction. . © 2018 IOP

  9. Electron–phonon coupling from finite differences (United States)

    Monserrat, Bartomeu


    The interaction between electrons and phonons underlies multiple phenomena in physics, chemistry, and materials science. Examples include superconductivity, electronic transport, and the temperature dependence of optical spectra. A first-principles description of electron–phonon coupling enables the study of the above phenomena with accuracy and material specificity, which can be used to understand experiments and to predict novel effects and functionality. In this topical review, we describe the first-principles calculation of electron–phonon coupling from finite differences. The finite differences approach provides several advantages compared to alternative methods, in particular (i) any underlying electronic structure method can be used, and (ii) terms beyond the lowest order in the electron–phonon interaction can be readily incorporated. But these advantages are associated with a large computational cost that has until recently prevented the widespread adoption of this method. We describe some recent advances, including nondiagonal supercells and thermal lines, that resolve these difficulties, and make the calculation of electron–phonon coupling from finite differences a powerful tool. We review multiple applications of the calculation of electron–phonon coupling from finite differences, including the temperature dependence of optical spectra, superconductivity, charge transport, and the role of defects in semiconductors. These examples illustrate the advantages of finite differences, with cases where semilocal density functional theory is not appropriate for the calculation of electron–phonon coupling and many-body methods such as the GW approximation are required, as well as examples in which higher-order terms in the electron–phonon interaction are essential for an accurate description of the relevant phenomena. We expect that the finite difference approach will play a central role in future studies of the electron–phonon interaction.

  10. Modeling pulse driven antenna systems with finite differences (United States)

    Barth, Marvin; Pennock, Steve; Ziolkowski, Richard; McLeod, Robert


    The capability was developed of modeling the performance of general, pulse driven, antenna systems. The approach is to use TSAR, a three dimensional finite difference time domain (FDTD) code, to model the antenna structure and the surrounding near field environment. A far field project algorithm was used to obtain its far field response. Specifically, this algorithm utilizes the tangential electric and magnetic fields at a specified surface of the TSAR FDTD computational volume and calculates the resulting fields far from the equivalent magnetic and electric sources. This approach is illustrated by considering the TEB antenna system. The system is modeled with the code and the results are compared with anechoic chamber data.

  11. Nonstandard finite difference schemes for differential equations

    Directory of Open Access Journals (Sweden)

    Mohammad Mehdizadeh Khalsaraei


    Full Text Available In this paper, the reorganization of the denominator of the discrete derivative and nonlocal approximation of nonlinear terms are used in the design of nonstandard finite difference schemes (NSFDs. Numerical examples confirming then efficiency of schemes, for some differential equations are provided. In order to illustrate the accuracy of the new NSFDs, the numerical results are compared with standard methods.

  12. Finite difference order doubling in two dimensions

    Energy Technology Data Exchange (ETDEWEB)

    Killingbeck, John P [Mathematics Centre, University of Hull, Hull HU6 7RX (United Kingdom); Jolicard, Georges [Universite de Franche-Comte, Institut Utinam (UMR CNRS 6213), Observatoire de Besancon, 41 bis Avenue de l' Observatoire, BP1615, 25010 Besancon cedex (France)


    An order doubling process previously used to obtain eighth-order eigenvalues from the fourth-order Numerov method is applied to the perturbed oscillator in two dimensions. A simple method of obtaining high order finite difference operators is reported and an odd parity boundary condition is found to be effective in facilitating the smooth operation of the order doubling process.

  13. Thermo-mechanically coupled deformation with the finite difference method (United States)

    Duretz, Thibault; Raess, Ludovic; Podladchikov, Yury; Schmalholz, Stefan


    Numerous geological observations are the result of thermo-mechanical processes. In particular, tectonic processes such as ductile shear localization can be induced by the intrinsic coupling that exists between deformation, energy and rheology. In order to study these processes, we have designed two-dimensional implicit and explicit finite difference models. These models take into account a temperature-dependent power-law rheology as well as diffusion, advection, and conversion of mechanical work into heat. For implicit models, different non-linear solving strategies were implemented (implicit/explicit thermo-mechanical coupling, Picard/Newton linearisations). We model thermo-mechanically activated shear localization in lower crustal conditions using these different numerical methods. We show that all methods capture the thermo-mechanical instability and exhibit similar temporal evolution. We perform quantitative comparisons with specifically designed tests (conservation of energy, analytical solution, scaling law). For implicit approaches, we discuss the treatment of thermo-mechanical coupling (implicit/explicit) and the impact of the imposed accuracy (tolerance) of the non-linear solvers. We compare the accuracy of the explicit method with the one of the implicit methods. Numerical algorithms based on explicit methods to study thermo-mechanical shear localisation are attractive because they are easy to program and very comprehensible.

  14. Algorithmic vs. finite difference Jacobians for infrared atmospheric radiative transfer (United States)

    Schreier, Franz; Gimeno García, Sebastián; Vasquez, Mayte; Xu, Jian


    Jacobians, i.e. partial derivatives of the radiance and transmission spectrum with respect to the atmospheric state parameters to be retrieved from remote sensing observations, are important for the iterative solution of the nonlinear inverse problem. Finite difference Jacobians are easy to implement, but computationally expensive and possibly of dubious quality; on the other hand, analytical Jacobians are accurate and efficient, but the implementation can be quite demanding. GARLIC, our "Generic Atmospheric Radiation Line-by-line Infrared Code", utilizes algorithmic differentiation (AD) techniques to implement derivatives w.r.t. atmospheric temperature and molecular concentrations. In this paper, we describe our approach for differentiation of the high resolution infrared and microwave spectra and provide an in-depth assessment of finite difference approximations using "exact" AD Jacobians as a reference. The results indicate that the "standard" two-point finite differences with 1 K and 1% perturbation for temperature and volume mixing ratio, respectively, can exhibit substantial errors, and central differences are significantly better. However, these deviations do not transfer into the truncated singular value decomposition solution of a least squares problem. Nevertheless, AD Jacobians are clearly recommended because of the superior speed and accuracy.

  15. Optimized Finite-Difference Coefficients for Hydroacoustic Modeling (United States)

    Preston, L. A.


    Responsible utilization of marine renewable energy sources through the use of current energy converter (CEC) and wave energy converter (WEC) devices requires an understanding of the noise generation and propagation from these systems in the marine environment. Acoustic noise produced by rotating turbines, for example, could adversely affect marine animals and human-related marine activities if not properly understood and mitigated. We are utilizing a 3-D finite-difference acoustic simulation code developed at Sandia that can accurately propagate noise in the complex bathymetry in the near-shore to open ocean environment. As part of our efforts to improve computation efficiency in the large, high-resolution domains required in this project, we investigate the effects of using optimized finite-difference coefficients on the accuracy of the simulations. We compare accuracy and runtime of various finite-difference coefficients optimized via criteria such as maximum numerical phase speed error, maximum numerical group speed error, and L-1 and L-2 norms of weighted numerical group and phase speed errors over a given spectral bandwidth. We find that those coefficients optimized for L-1 and L-2 norms are superior in accuracy to those based on maximal error and can produce runtimes of 10% of the baseline case, which uses Taylor Series finite-difference coefficients at the Courant time step limit. We will present comparisons of the results for the various cases evaluated as well as recommendations for utilization of the cases studied. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

  16. Seismic imaging using finite-differences and parallel computers

    Energy Technology Data Exchange (ETDEWEB)

    Ober, C.C. [Sandia National Labs., Albuquerque, NM (United States)


    A key to reducing the risks and costs of associated with oil and gas exploration is the fast, accurate imaging of complex geologies, such as salt domes in the Gulf of Mexico and overthrust regions in US onshore regions. Prestack depth migration generally yields the most accurate images, and one approach to this is to solve the scalar wave equation using finite differences. As part of an ongoing ACTI project funded by the US Department of Energy, a finite difference, 3-D prestack, depth migration code has been developed. The goal of this work is to demonstrate that massively parallel computers can be used efficiently for seismic imaging, and that sufficient computing power exists (or soon will exist) to make finite difference, prestack, depth migration practical for oil and gas exploration. Several problems had to be addressed to get an efficient code for the Intel Paragon. These include efficient I/O, efficient parallel tridiagonal solves, and high single-node performance. Furthermore, to provide portable code the author has been restricted to the use of high-level programming languages (C and Fortran) and interprocessor communications using MPI. He has been using the SUNMOS operating system, which has affected many of his programming decisions. He will present images created from two verification datasets (the Marmousi Model and the SEG/EAEG 3D Salt Model). Also, he will show recent images from real datasets, and point out locations of improved imaging. Finally, he will discuss areas of current research which will hopefully improve the image quality and reduce computational costs.

  17. Finite-difference modeling of commercial aircraft using TSAR

    Energy Technology Data Exchange (ETDEWEB)

    Pennock, S.T.; Poggio, A.J.


    Future aircraft may have systems controlled by fiber optic cables, to reduce susceptibility to electromagnetic interference. However, the digital systems associated with the fiber optic network could still experience upset due to powerful radio stations, radars, and other electromagnetic sources, with potentially serious consequences. We are modeling the electromagnetic behavior of commercial transport aircraft in support of the NASA Fly-by-Light/Power-by-Wire program, using the TSAR finite-difference time-domain code initially developed for the military. By comparing results obtained from TSAR with data taken on a Boeing 757 at the Air Force Phillips Lab., we hope to show that FDTD codes can serve as an important tool in the design and certification of U.S. commercial aircraft, helping American companies to produce safe, reliable air transportation.

  18. Flexible Automatic Discretization for Finite Differences: Eliminating the Human Factor (United States)

    Pranger, Casper


    In the geophysical numerical modelling community, finite differences are (in part due to their small footprint) a popular spatial discretization method for PDEs in the regular-shaped continuum that is the earth. However, they rapidly become prone to programming mistakes when physics increase in complexity. To eliminate opportunities for human error, we have designed an automatic discretization algorithm using Wolfram Mathematica, in which the user supplies symbolic PDEs, the number of spatial dimensions, and a choice of symbolic boundary conditions, and the script transforms this information into matrix- and right-hand-side rules ready for use in a C++ code that will accept them. The symbolic PDEs are further used to automatically develop and perform manufactured solution benchmarks, ensuring at all stages physical fidelity while providing pragmatic targets for numerical accuracy. We find that this procedure greatly accelerates code development and provides a great deal of flexibility in ones choice of physics.

  19. On a Stable and Consistent Finite Difference Scheme for a Time ...

    African Journals Online (AJOL)

    In this paper, a stable and consistent criterion to an explicit finite difference scheme for a time-dependent Schrodinger wave equation (TDSWE) was presented. This paper is a departure from the well-established time independent Schrodinger Wave Equation (SWE). To develop the stability criterion for the scheme, the ...

  20. Finite Difference Study of MHD Stokes Problem for a Vertical Infinite ...

    African Journals Online (AJOL)

    The explicit finite difference method is employed to study the effects of both the Hall and ionslip currents on a free convective flow of a viscous heat generating rotating fluid past an impulsively started infinite vertical plate, to which a strong magnetic field is applied perpendicularly. The velocity (both primary and secondary) ...

  1. Viscoelastic Finite Difference Modeling Using Graphics Processing Units (United States)

    Fabien-Ouellet, G.; Gloaguen, E.; Giroux, B.


    Full waveform seismic modeling requires a huge amount of computing power that still challenges today's technology. This limits the applicability of powerful processing approaches in seismic exploration like full-waveform inversion. This paper explores the use of Graphics Processing Units (GPU) to compute a time based finite-difference solution to the viscoelastic wave equation. The aim is to investigate whether the adoption of the GPU technology is susceptible to reduce significantly the computing time of simulations. The code presented herein is based on the freely accessible software of Bohlen (2002) in 2D provided under a General Public License (GNU) licence. This implementation is based on a second order centred differences scheme to approximate time differences and staggered grid schemes with centred difference of order 2, 4, 6, 8, and 12 for spatial derivatives. The code is fully parallel and is written using the Message Passing Interface (MPI), and it thus supports simulations of vast seismic models on a cluster of CPUs. To port the code from Bohlen (2002) on GPUs, the OpenCl framework was chosen for its ability to work on both CPUs and GPUs and its adoption by most of GPU manufacturers. In our implementation, OpenCL works in conjunction with MPI, which allows computations on a cluster of GPU for large-scale model simulations. We tested our code for model sizes between 1002 and 60002 elements. Comparison shows a decrease in computation time of more than two orders of magnitude between the GPU implementation run on a AMD Radeon HD 7950 and the CPU implementation run on a 2.26 GHz Intel Xeon Quad-Core. The speed-up varies depending on the order of the finite difference approximation and generally increases for higher orders. Increasing speed-ups are also obtained for increasing model size, which can be explained by kernel overheads and delays introduced by memory transfers to and from the GPU through the PCI-E bus. Those tests indicate that the GPU memory size

  2. A General Symbolic PDE Solver Generator: Beyond Explicit Schemes

    Directory of Open Access Journals (Sweden)

    K. Sheshadri


    Full Text Available This paper presents an extension of our Mathematica- and MathCode-based symbolic-numeric framework for solving a variety of partial differential equation (PDE problems. The main features of our earlier work, which implemented explicit finite-difference schemes, include the ability to handle (1 arbitrary number of dependent variables, (2 arbitrary dimensionality, and (3 arbitrary geometry, as well as (4 developing finite-difference schemes to any desired order of approximation. In the present paper, extensions of this framework to implicit schemes and the method of lines are discussed. While C++ code is generated, using the MathCode system for the implicit method, Modelica code is generated for the method of lines. The latter provides a preliminary PDE support for the Modelica language. Examples illustrating the various aspects of the solver generator are presented.

  3. Abstract Level Parallelization of Finite Difference Methods

    Directory of Open Access Journals (Sweden)

    Edwin Vollebregt


    Full Text Available A formalism is proposed for describing finite difference calculations in an abstract way. The formalism consists of index sets and stencils, for characterizing the structure of sets of data items and interactions between data items (“neighbouring relations”. The formalism provides a means for lifting programming to a more abstract level. This simplifies the tasks of performance analysis and verification of correctness, and opens the way for automaticcode generation. The notation is particularly useful in parallelization, for the systematic construction of parallel programs in a process/channel programming paradigm (e.g., message passing. This is important because message passing, unfortunately, still is the only approach that leads to acceptable performance for many more unstructured or irregular problems on parallel computers that have non-uniform memory access times. It will be shown that the use of index sets and stencils greatly simplifies the determination of which data must be exchanged between different computing processes.

  4. Explicit time-reversible orbit integration in Particle In Cell codes with static homogeneous magnetic field (United States)

    Patacchini, L.; Hutchinson, I. H.


    A new explicit time-reversible orbit integrator for the equations of motion in a static homogeneous magnetic field - called Cyclotronic integrator - is presented. Like Spreiter and Walter's Taylor expansion algorithm, for sufficiently weak electric field gradients this second order method does not require a fine resolution of the Larmor motion; it has however the essential advantage of being symplectic, hence time-reversible. The Cyclotronic integrator is only subject to a linear stability constraint ( ΩΔ t Democritus can reduce the cost of orbit integration by up to a factor of ten.

  5. On the Stability of the Finite Difference based Lattice Boltzmann Method

    KAUST Repository

    El-Amin, Mohamed


    This paper is devoted to determining the stability conditions for the finite difference based lattice Boltzmann method (FDLBM). In the current scheme, the 9-bit two-dimensional (D2Q9) model is used and the collision term of the Bhatnagar- Gross-Krook (BGK) is treated implicitly. The implicitness of the numerical scheme is removed by introducing a new distribution function different from that being used. Therefore, a new explicit finite-difference lattice Boltzmann method is obtained. Stability analysis of the resulted explicit scheme is done using Fourier expansion. Then, stability conditions in terms of time and spatial steps, relaxation time and explicitly-implicitly parameter are determined by calculating the eigenvalues of the given difference system. The determined conditions give the ranges of the parameters that have stable solutions.

  6. Determination of finite-difference weights using scaled binomial windows

    KAUST Repository

    Chu, Chunlei


    The finite-difference method evaluates a derivative through a weighted summation of function values from neighboring grid nodes. Conventional finite-difference weights can be calculated either from Taylor series expansions or by Lagrange interpolation polynomials. The finite-difference method can be interpreted as a truncated convolutional counterpart of the pseudospectral method in the space domain. For this reason, we also can derive finite-difference operators by truncating the convolution series of the pseudospectral method. Various truncation windows can be employed for this purpose and they result in finite-difference operators with different dispersion properties. We found that there exists two families of scaled binomial windows that can be used to derive conventional finite-difference operators analytically. With a minor change, these scaled binomial windows can also be used to derive optimized finite-difference operators with enhanced dispersion properties. © 2012 Society of Exploration Geophysicists.

  7. Finite-difference method Stokes solver (FDMSS) for 3D pore geometries: Software development, validation and case studies

    KAUST Repository

    Gerke, Kirill M.


    Permeability is one of the fundamental properties of porous media and is required for large-scale Darcian fluid flow and mass transport models. Whilst permeability can be measured directly at a range of scales, there are increasing opportunities to evaluate permeability from pore-scale fluid flow simulations. We introduce the free software Finite-Difference Method Stokes Solver (FDMSS) that solves Stokes equation using a finite-difference method (FDM) directly on voxelized 3D pore geometries (i.e. without meshing). Based on explicit convergence studies, validation on sphere packings with analytically known permeabilities, and comparison against lattice-Boltzmann and other published FDM studies, we conclude that FDMSS provides a computationally efficient and accurate basis for single-phase pore-scale flow simulations. By implementing an efficient parallelization and code optimization scheme, permeability inferences can now be made from 3D images of up to 109 voxels using modern desktop computers. Case studies demonstrate the broad applicability of the FDMSS software for both natural and artificial porous media.

  8. The finite-difference time-domain method for electromagnetics with Matlab simulations

    CERN Document Server

    Elsherbeni, Atef Z


    This book introduces the powerful Finite-Difference Time-Domain method to students and interested researchers and readers. An effective introduction is accomplished using a step-by-step process that builds competence and confidence in developing complete working codes for the design and analysis of various antennas and microwave devices.

  9. A finite difference, multipoint flux numerical approach to flow in porous media: Numerical examples

    KAUST Repository

    Osman, Hossam Omar


    It is clear that none of the current available numerical schemes which may be adopted to solve transport phenomena in porous media fulfill all the required robustness conditions. That is while the finite difference methods are the simplest of all, they face several difficulties in complex geometries and anisotropic media. On the other hand, while finite element methods are well suited to complex geometries and can deal with anisotropic media, they are more involved in coding and usually require more execution time. Therefore, in this work we try to combine some features of the finite element technique, namely its ability to work with anisotropic media with the finite difference approach. We reduce the multipoint flux, mixed finite element technique through some quadrature rules to an equivalent cell-centered finite difference approximation. We show examples on using this technique to single-phase flow in anisotropic porous media.

  10. Fourth order compact finite difference method for solving singularly ...

    African Journals Online (AJOL)

    A numerical method based on finite difference scheme with uniform mesh is presented for solving singularly perturbed two-point boundary value problems of 1D reaction-diffusion equations. First, the derivatives of the given differential equation is replaced by the finite difference approximations and then, solved by using ...

  11. Fourth Order Compact Finite Difference Method for Solving ...

    African Journals Online (AJOL)


    A numerical method based on finite difference scheme with uniform mesh is presented for solving singularly perturbed two-point boundary value problems of 1D reaction-diffusion equations. First, the derivatives of the given differential equation is replaced by the finite difference approximations and then, solved by using ...

  12. Nonuniform grid implicit spatial finite difference method for acoustic wave modeling in tilted transversely isotropic media

    KAUST Repository

    Chu, Chunlei


    Discrete earth models are commonly represented by uniform structured grids. In order to ensure accurate numerical description of all wave components propagating through these uniform grids, the grid size must be determined by the slowest velocity of the entire model. Consequently, high velocity areas are always oversampled, which inevitably increases the computational cost. A practical solution to this problem is to use nonuniform grids. We propose a nonuniform grid implicit spatial finite difference method which utilizes nonuniform grids to obtain high efficiency and relies on implicit operators to achieve high accuracy. We present a simple way of deriving implicit finite difference operators of arbitrary stencil widths on general nonuniform grids for the first and second derivatives and, as a demonstration example, apply these operators to the pseudo-acoustic wave equation in tilted transversely isotropic (TTI) media. We propose an efficient gridding algorithm that can be used to convert uniformly sampled models onto vertically nonuniform grids. We use a 2D TTI salt model to demonstrate its effectiveness and show that the nonuniform grid implicit spatial finite difference method can produce highly accurate seismic modeling results with enhanced efficiency, compared to uniform grid explicit finite difference implementations. © 2011 Elsevier B.V.

  13. A time domain finite-difference technique for oblique incidence of antiplane waves in heterogeneous dissipative media

    Directory of Open Access Journals (Sweden)

    A. Caserta


    Full Text Available This paper deals with the antiplane wave propagation in a 2D heterogeneous dissipative medium with complex layer interfaces and irregular topography. The initial boundary value problem which represents the viscoelastic dynamics driving 2D antiplane wave propagation is formulated. The discretization scheme is based on the finite-difference technique. Our approach presents some innovative features. First, the introduction of the forcing term into the equation of motion offers the advantage of an easier handling of different inputs such as general functions of spatial coordinates and time. Second, in the case of a straight-line source, the symmetry of the incident plane wave allows us to solve the problem of oblique incidence simply by rotating the 2D model. This artifice reduces the oblique incidence to the vertical one. Third, the conventional rheological model of the generalized Maxwell body has been extended to include the stress-free boundary condition. For this reason we solve explicitly the stress-free boundary condition, not following the most popular technique called vacuum formalism. Finally, our numerical code has been constructed to model the seismic response of complex geological structures: real geological interfaces are automatically digitized and easily introduced in the input model. Three numerical applications are discussed. To validate our numerical model, the first test compares the results of our code with others shown in the literature. The second application rotates the input model to simulate the oblique incidence. The third one deals with a real high-complexity 2D geological structure.

  14. Single-cone finite difference scheme for the (2+1)D Dirac von Neumann equation (United States)

    Pötz, Walter; Schreilechner, Magdalena


    An explicit finite difference scheme is presented for the von Neumann equation for (2+1)D Dirac fermions. It is founded upon a staggered space-time grid which ensures a single-cone energy dispersion and performs the time-derivative in one sweep using a three-step leap-frog procedure. It enables a space-time-resolved numerical treatment of the mixed-state dynamics of Dirac fermions within the effective single-particle density matrix formalism. Energy-momentum dispersion, stability and convergence properties are derived. Elementary numerical tests to demonstrate stability properties use parameters which pertain to topological insulator surface states. A method for the simulation of charge injection from an electric contact is presented and tested numerically. Potential extensions of the scheme to a Dirac-Lindblad equation, real-space-time Green's function formulations, and higher-order finite-difference schemes are discussed.

  15. Finite-difference numerical simulations of underground explosion cavity decoupling (United States)

    Aldridge, D. F.; Preston, L. A.; Jensen, R. P.


    Earth models containing a significant portion of ideal fluid (e.g., air and/or water) are of increasing interest in seismic wave propagation simulations. Examples include a marine model with a thick water layer, and a land model with air overlying a rugged topographic surface. The atmospheric infrasound community is currently interested in coupled seismic-acoustic propagation of low-frequency signals over long ranges (~tens to ~hundreds of kilometers). Also, accurate and efficient numerical treatment of models containing underground air-filled voids (caves, caverns, tunnels, subterranean man-made facilities) is essential. In support of the Source Physics Experiment (SPE) conducted at the Nevada National Security Site (NNSS), we are developing a numerical algorithm for simulating coupled seismic and acoustic wave propagation in mixed solid/fluid media. Solution methodology involves explicit, time-domain, finite-differencing of the elastodynamic velocity-stress partial differential system on a three-dimensional staggered spatial grid. Conditional logic is used to avoid shear stress updating within the fluid zones; this approach leads to computational efficiency gains for models containing a significant proportion of ideal fluid. Numerical stability and accuracy are maintained at air/rock interfaces (where the contrast in mass density is on the order of 1 to 2000) via a finite-difference operator "order switching" formalism. The fourth-order spatial FD operator used throughout the bulk of the earth model is reduced to second-order in the immediate vicinity of a high-contrast interface. Current modeling efforts are oriented toward quantifying the amount of atmospheric infrasound energy generated by various underground seismic sources (explosions and earthquakes). Source depth and orientation, and surface topography play obvious roles. The cavity decoupling problem, where an explosion is detonated within an air-filled void, is of special interest. A point explosion

  16. Nonstandard Finite Difference Method Applied to a Linear Pharmacokinetics Model

    Directory of Open Access Journals (Sweden)

    Oluwaseun Egbelowo


    Full Text Available We extend the nonstandard finite difference method of solution to the study of pharmacokinetic–pharmacodynamic models. Pharmacokinetic (PK models are commonly used to predict drug concentrations that drive controlled intravenous (I.V. transfers (or infusion and oral transfers while pharmacokinetic and pharmacodynamic (PD interaction models are used to provide predictions of drug concentrations affecting the response of these clinical drugs. We structure a nonstandard finite difference (NSFD scheme for the relevant system of equations which models this pharamcokinetic process. We compare the results obtained to standard methods. The scheme is dynamically consistent and reliable in replicating complex dynamic properties of the relevant continuous models for varying step sizes. This study provides assistance in understanding the long-term behavior of the drug in the system, and validation of the efficiency of the nonstandard finite difference scheme as the method of choice.

  17. Nonstandard Finite Difference Method Applied to a Linear Pharmacokinetics Model. (United States)

    Egbelowo, Oluwaseun; Harley, Charis; Jacobs, Byron


    We extend the nonstandard finite difference method of solution to the study of pharmacokinetic-pharmacodynamic models. Pharmacokinetic (PK) models are commonly used to predict drug concentrations that drive controlled intravenous (I.V.) transfers (or infusion and oral transfers) while pharmacokinetic and pharmacodynamic (PD) interaction models are used to provide predictions of drug concentrations affecting the response of these clinical drugs. We structure a nonstandard finite difference (NSFD) scheme for the relevant system of equations which models this pharamcokinetic process. We compare the results obtained to standard methods. The scheme is dynamically consistent and reliable in replicating complex dynamic properties of the relevant continuous models for varying step sizes. This study provides assistance in understanding the long-term behavior of the drug in the system, and validation of the efficiency of the nonstandard finite difference scheme as the method of choice.

  18. Finite difference computing with PDEs a modern software approach

    CERN Document Server

    Langtangen, Hans Petter


    This book is open access under a CC BY 4.0 license. This easy-to-read book introduces the basics of solving partial differential equations by means of finite difference methods. Unlike many of the traditional academic works on the topic, this book was written for practitioners. Accordingly, it especially addresses: the construction of finite difference schemes, formulation and implementation of algorithms, verification of implementations, analyses of physical behavior as implied by the numerical solutions, and how to apply the methods and software to solve problems in the fields of physics and biology.

  19. Finite-Difference Algorithms For Computing Sound Waves (United States)

    Davis, Sanford


    Governing equations considered as matrix system. Method variant of method described in "Scheme for Finite-Difference Computations of Waves" (ARC-12970). Present method begins with matrix-vector formulation of fundamental equations, involving first-order partial derivatives of primitive variables with respect to space and time. Particular matrix formulation places time and spatial coordinates on equal footing, so governing equations considered as matrix system and treated as unit. Spatial and temporal discretizations not treated separately as in other finite-difference methods, instead treated together by linking spatial-grid interval and time step via common scale factor related to speed of sound.

  20. Efficient Energyminimization in Finite-Difference Micromagnetics: Speeding up Hysteresis Computations

    CERN Document Server

    Abert, Claas; Bruckner, Florian; Satz, Armin; Suess, Dieter


    We implement an efficient energy-minimization algorithm for finite-difference micromagnetics that proofs especially usefull for the computation of hysteresis loops. Compared to results obtained by time integration of the Landau-Lifshitz-Gilbert equation, a speedup of up to two orders of magnitude is gained. The method is implemented in a finite-difference code running on CPUs as well as GPUs. This setup enables us to compute accurate hysteresis loops of large systems with a reasonable computational efford. As a benchmark we solve the {\\mu}Mag Standard Problem #1 with a high spatial resolution and compare the results to the solution of the Landau-Lifshitz-Gilbert equation in terms of accuracy and computing time.

  1. Chebyshev Finite Difference Method for Fractional Boundary Value Problems

    Directory of Open Access Journals (Sweden)



    Full Text Available This paper presents a numerical method for fractional differential equations using Chebyshev finite difference method. The fractional derivatives are described in the Caputo sense. Numerical results show that this method is of high accuracy and is more convenient and efficient for solving boundary value problems involving fractional ordinary differential equations. AMS Subject Classification: 34A08 Keywords and Phrases: Chebyshev polynomials, Gauss-Lobatto points, fractional differential equation, finite difference 1. Introduction The idea of a derivative which interpolates between the familiar integer order derivatives was introduced many years ago and has gained increasing importance only in recent years due to the development of mathematical models of a certain situations in engineering, materials science, control theory, polymer modelling etc. For example see [20, 22, 25, 26]. Most fractional order differential equations describing real life situations, in general do not have exact analytical solutions. Several numerical and approximate analytical methods for ordinary differential equation Received: December 2014; Accepted: March 2015 57 Journal of Mathematical Extension Vol. 9, No. 3, (2015, 57-71 ISSN: 1735-8299 URL: Chebyshev Finite Difference Method for Fractional Boundary Value Problems H. Azizi Taft Branch, Islamic Azad University Abstract. This paper presents a numerical method for fractional differential equations using Chebyshev finite difference method. The fractional derivative

  2. Alternating Direction Implicit Finite Difference Time Domain Acoustic ...

    African Journals Online (AJOL)

    A time domain numerical technique is presented for the modelling of acoustic wave phenomena. The technique is an adaptation of the alternating direction implicit finite difference time domain method. The stability condition for the algorithm is given. Simple illustrations of propagation in an infinite homogeneous medium are ...

  3. Optimisation of Plate Thickness Using Finite Difference Method ...

    African Journals Online (AJOL)

    A finite difference numerical method of solving biharmonic equation is presented. The biharmonic equation and plate theory are used to solve a classical engineering problem involving the optimisation of plate thickness to minimise deformations and stresses in the plate. Matlab routines were developed to solve the ...

  4. Finite difference simulation of biological chromium (VI) reduction in ...

    African Journals Online (AJOL)


    May 8, 2013 ... test columns. For the first time, the performance of a simulated barrier was evaluated internally in porous media using a finite difference approach. Parameters in the model were optimised at .... sis, only a black-box approach may be employed allowing pre- diction only in a narrow range of operating ...

  5. Linear discontinuous finite difference formulation for synthetic coarse-mesh few-group diffusion calculations

    Energy Technology Data Exchange (ETDEWEB)

    Aragones, J.M.; Ahnert, C.


    A linear discontinuous finite difference formulation to solve the diffusion equations in coarse mesh and few groups is developed. The correction factors for heterogeneities, coarse mesh, and spectral effects are general interface flux discontinuity factors that can be explicitly calculated (synthetized) from detailed diffusion or transport solutions in fine mesh (heterogeneous) and multigroups, preserving the integrated fluxes and interface net currents. The stability is explicitly established for general synthetizations and for specific fine to coarse mesh and group reductions. Computing methods have been implemented for one-group (grey) synthetic diffusion acceleration, two-dimensional nodal/local solutions, and three-dimensional nodal simulation of pressurized water reactor cores. Results demonstrate the simplicity and stability of the formulation, a regular behaviour of the correction factors, an outstanding acceleration performance, and high potential for parallel and vector computing.

  6. Broadband ground motion simulation using a paralleled hybrid approach of Frequency Wavenumber and Finite Difference method (United States)

    Chen, M.; Wei, S.


    The serious damage of Mexico City caused by the 1985 Michoacan earthquake 400 km away indicates that urban areas may be affected by remote earthquakes. To asses earthquake risk of urban areas imposed by distant earthquakes, we developed a hybrid Frequency Wavenumber (FK) and Finite Difference (FD) code implemented with MPI, since the computation of seismic wave propagation from a distant earthquake using a single numerical method (e.g. Finite Difference, Finite Element or Spectral Element) is very expensive. In our approach, we compute the incident wave field (ud) at the boundaries of the excitation box, which surrounding the local structure, using a paralleled FK method (Zhu and Rivera, 2002), and compute the total wave field (u) within the excitation box using a parallelled 2D FD method. We apply perfectly matched layer (PML) absorbing condition to the diffracted wave field (u-ud). Compared to previous Generalized Ray Theory and Finite Difference (Wen and Helmberger, 1998), Frequency Wavenumber and Spectral Element (Tong et al., 2014), and Direct Solution Method and Spectral Element hybrid method (Monteiller et al., 2013), our absorbing boundary condition dramatically suppress the numerical noise. The MPI implementation of our method can greatly speed up the calculation. Besides, our hybrid method also has a potential use in high resolution array imaging similar to Tong et al. (2014).

  7. The mimetic finite difference method for elliptic problems

    CERN Document Server

    Veiga, Lourenço Beirão; Manzini, Gianmarco


    This book describes the theoretical and computational aspects of the mimetic finite difference method for a wide class of multidimensional elliptic problems, which includes diffusion, advection-diffusion, Stokes, elasticity, magnetostatics and plate bending problems. The modern mimetic discretization technology developed in part by the Authors allows one to solve these equations on unstructured polygonal, polyhedral and generalized polyhedral meshes. The book provides a practical guide for those scientists and engineers that are interested in the computational properties of the mimetic finite difference method such as the accuracy, stability, robustness, and efficiency. Many examples are provided to help the reader to understand and implement this method. This monograph also provides the essential background material and describes basic mathematical tools required to develop further the mimetic discretization technology and to extend it to various applications.

  8. Time dependent wave envelope finite difference analysis of sound propagation (United States)

    Baumeister, K. J.


    A transient finite difference wave envelope formulation is presented for sound propagation, without steady flow. Before the finite difference equations are formulated, the governing wave equation is first transformed to a form whose solution tends not to oscillate along the propagation direction. This transformation reduces the required number of grid points by an order of magnitude. Physically, the transformed pressure represents the amplitude of the conventional sound wave. The derivation for the wave envelope transient wave equation and appropriate boundary conditions are presented as well as the difference equations and stability requirements. To illustrate the method, example solutions are presented for sound propagation in a straight hard wall duct and in a two dimensional straight soft wall duct. The numerical results are in good agreement with exact analytical results.

  9. Time-dependent optimal heater control using finite difference method

    Energy Technology Data Exchange (ETDEWEB)

    Li, Zhen Zhe; Heo, Kwang Su; Choi, Jun Hoo; Seol, Seoung Yun [Chonnam National Univ., Gwangju (Korea, Republic of)


    Thermoforming is one of the most versatile and economical process to produce polymer products. The drawback of thermoforming is difficult to control thickness of final products. Temperature distribution affects the thickness distribution of final products, but temperature difference between surface and center of sheet is difficult to decrease because of low thermal conductivity of ABS material. In order to decrease temperature difference between surface and center, heating profile must be expressed as exponential function form. In this study, Finite Difference Method was used to find out the coefficients of optimal heating profiles. Through investigation, the optimal results using Finite Difference Method show that temperature difference between surface and center of sheet can be remarkably minimized with satisfying temperature of forming window.

  10. Direct Simulations of Transition and Turbulence Using High-Order Accurate Finite-Difference Schemes (United States)

    Rai, Man Mohan


    In recent years the techniques of computational fluid dynamics (CFD) have been used to compute flows associated with geometrically complex configurations. However, success in terms of accuracy and reliability has been limited to cases where the effects of turbulence and transition could be modeled in a straightforward manner. Even in simple flows, the accurate computation of skin friction and heat transfer using existing turbulence models has proved to be a difficult task, one that has required extensive fine-tuning of the turbulence models used. In more complex flows (for example, in turbomachinery flows in which vortices and wakes impinge on airfoil surfaces causing periodic transitions from laminar to turbulent flow) the development of a model that accounts for all scales of turbulence and predicts the onset of transition may prove to be impractical. Fortunately, current trends in computing suggest that it may be possible to perform direct simulations of turbulence and transition at moderate Reynolds numbers in some complex cases in the near future. This seminar will focus on direct simulations of transition and turbulence using high-order accurate finite-difference methods. The advantage of the finite-difference approach over spectral methods is that complex geometries can be treated in a straightforward manner. Additionally, finite-difference techniques are the prevailing methods in existing application codes. In this seminar high-order-accurate finite-difference methods for the compressible and incompressible formulations of the unsteady Navier-Stokes equations and their applications to direct simulations of turbulence and transition will be presented.

  11. The Laguerre finite difference one-way equation solver (United States)

    Terekhov, Andrew V.


    This paper presents a new finite difference algorithm for solving the 2D one-way wave equation with a preliminary approximation of a pseudo-differential operator by a system of partial differential equations. As opposed to the existing approaches, the integral Laguerre transform instead of Fourier transform is used. After carrying out the approximation of spatial variables it is possible to obtain systems of linear algebraic equations with better computing properties and to reduce computer costs for their solution. High accuracy of calculations is attained at the expense of employing finite difference approximations of higher accuracy order that are based on the dispersion-relationship-preserving method and the Richardson extrapolation in the downward continuation direction. The numerical experiments have verified that as compared to the spectral difference method based on Fourier transform, the new algorithm allows one to calculate wave fields with a higher degree of accuracy and a lower level of numerical noise and artifacts including those for non-smooth velocity models. In the context of solving the geophysical problem the post-stack migration for velocity models of the types Syncline and Sigsbee2A has been carried out. It is shown that the images obtained contain lesser noise and are considerably better focused as compared to those obtained by the known Fourier Finite Difference and Phase-Shift Plus Interpolation methods. There is an opinion that purely finite difference approaches do not allow carrying out the seismic migration procedure with sufficient accuracy, however the results obtained disprove this statement. For the supercomputer implementation it is proposed to use the parallel dichotomy algorithm when solving systems of linear algebraic equations with block-tridiagonal matrices.

  12. A finite difference method for free boundary problems

    KAUST Repository

    Fornberg, Bengt


    Fornberg and Meyer-Spasche proposed some time ago a simple strategy to correct finite difference schemes in the presence of a free boundary that cuts across a Cartesian grid. We show here how this procedure can be combined with a minimax-based optimization procedure to rapidly solve a wide range of elliptic-type free boundary value problems. © 2009 Elsevier B.V. All rights reserved.

  13. Positivity-preserving High Order Finite Difference WENO Schemes for Compressible Euler Equations (United States)


    schemes are preferred, for example, cosmological simulation [5], finite difference WENO scheme [10] is more favored than DG schemes [2, 3] and the...densities, Journal of Computational Physics, 92 (1991), 273-295. [5] L.-L. Feng, C.-W. Shu and M. Zhang, A hybrid cosmological hydrodynamic/N-body code...Cockburn, C. Johnson, C.-W. Shu and E. Tadmor (Editor: A. Quarteroni), Lecture Notes in Mathematics, Springer, 1697 (1998), 325-432. [16] C.-W. Shu and S

  14. Least squares principle unifying finite element, finite difference and nodal methods for diffusion theory

    Energy Technology Data Exchange (ETDEWEB)

    Ackroyd, R.T.


    A least squares principle is described which uses a penalty function treatment of boundary and interface conditions. Appropriate choices of the trial functions and vectors employed in a dual representation of an approximate solution established complementary principles for the diffusion equation. A geometrical interpretation of the principles provides weighted residual methods for diffusion theory, thus establishing a unification of least squares, variational and weighted residual methods. The complementary principles are used with either a trial function for the flux or a trial vector for the current to establish for regular meshes a connection between finite element, finite difference and nodal methods, which can be exact if the mesh pitches are chosen appropriately. Whereas the coefficients in the usual nodal equations have to be determined iteratively, those derived via the complementary principles are given explicitly in terms of the data. For the further development of the connection between finite element, finite difference and nodal methods, some hybrid variational methods are described which employ both a trial function and a trial vector.

  15. Mimetic Finite Differences for Flow in Fractures from Microseismic Data

    KAUST Repository

    Al-Hinai, Omar


    We present a method for porous media flow in the presence of complex fracture networks. The approach uses the Mimetic Finite Difference method (MFD) and takes advantage of MFD\\'s ability to solve over a general set of polyhedral cells. This flexibility is used to mesh fracture intersections in two and three-dimensional settings without creating small cells at the intersection point. We also demonstrate how to use general polyhedra for embedding fracture boundaries in the reservoir domain. The target application is representing fracture networks inferred from microseismic analysis.

  16. A convergent finite difference scheme for the variational heat equation (United States)

    Coclite, Giuseppe Maria; Ridder, Johanna; Risebro, Nils Henrik


    The variational heat equation is a nonlinear, parabolic equation not in divergence form that arises as a model for the dynamics of the director field in a nematic liquid crystal. We present a finite difference scheme for a transformed, possibly degenerate version of this equation and prove that a subsequence of the numerical solutions converges to a weak solution. This result is supplemented by numerical examples that show that weak solutions are not unique and give some intuition about how to obtain a viscosity type solution.

  17. Finite element and finite difference methods in electromagnetic scattering

    CERN Document Server

    Morgan, MA


    This second volume in the Progress in Electromagnetic Research series examines recent advances in computational electromagnetics, with emphasis on scattering, as brought about by new formulations and algorithms which use finite element or finite difference techniques. Containing contributions by some of the world's leading experts, the papers thoroughly review and analyze this rapidly evolving area of computational electromagnetics. Covering topics ranging from the new finite-element based formulation for representing time-harmonic vector fields in 3-D inhomogeneous media using two coupled sca

  18. Some quantitative evaluations on finite difference local and global results

    Directory of Open Access Journals (Sweden)

    Costamagna Eugenio


    Full Text Available Refined Schwarz-Christoffel (SC conformal transformations allow us to perform reliable quantitative evaluation of the accuracy of local computation of electric and magnetic fields with limited effort, which can be useful to complement well known comparisons of global results. In this paper some examples are presented for mesh point potentials obtained by means of finite difference (FD methods, but it is possible that similar considerations will be useful in the case of finite element methods (FEM or meshless computations too.

  19. Finite-Difference Frequency-Domain Method in Nanophotonics

    DEFF Research Database (Denmark)

    Ivinskaya, Aliaksandra

    Optics and photonics are exciting, rapidly developing fields building their success largely on use of more and more elaborate artificially made, nanostructured materials. To further advance our understanding of light-matter interactions in these complicated artificial media, numerical modeling...... is obtained through free space squeezing technique, and nonuniform orthogonal grids are built to greatly improve the accuracy of simulations of highly heterogeneous nanostructures. Examples of the use of the finite-difference frequency-domain method in this thesis range from simulating localized modes...

  20. Finite-Difference Simulation of Elastic Wave with Separation in Pure P- and S-Modes

    Directory of Open Access Journals (Sweden)

    Ke-Yang Chen


    Full Text Available Elastic wave equation simulation offers a way to study the wave propagation when creating seismic data. We implement an equivalent dual elastic wave separation equation to simulate the velocity, pressure, divergence, and curl fields in pure P- and S-modes, and apply it in full elastic wave numerical simulation. We give the complete derivations of explicit high-order staggered-grid finite-difference operators, stability condition, dispersion relation, and perfectly matched layer (PML absorbing boundary condition, and present the resulting discretized formulas for the proposed elastic wave equation. The final numerical results of pure P- and S-modes are completely separated. Storage and computing time requirements are strongly reduced compared to the previous works. Numerical testing is used further to demonstrate the performance of the presented method.

  1. The mimetic finite difference method for the Landau-Lifshitz equation (United States)

    Kim, Eugenia; Lipnikov, Konstantin


    The Landau-Lifshitz equation describes the dynamics of the magnetization inside ferromagnetic materials. This equation is highly nonlinear and has a non-convex constraint (the magnitude of the magnetization is constant) which poses interesting challenges in developing numerical methods. We develop and analyze explicit and implicit mimetic finite difference schemes for this equation. These schemes work on general polytopal meshes which provide enormous flexibility to model magnetic devices with various shapes. A projection on the unit sphere is used to preserve the magnitude of the magnetization. We also provide a proof that shows the exchange energy is decreasing in certain conditions. The developed schemes are tested on general meshes that include distorted and randomized meshes. The numerical experiments include a test proposed by the National Institute of Standard and Technology and a test showing formation of domain wall structures in a thin film.

  2. An outgoing energy flux boundary condition for finite difference ICRP antenna models

    Energy Technology Data Exchange (ETDEWEB)

    Batchelor, D.B.; Carter, M.D.


    For antennas at the ion cyclotron range of frequencies (ICRF) modeling in vacuum can now be carried out to a high level of detail such that shaping of the current straps, isolating septa, and discrete Faraday shield structures can be included. An efficient approach would be to solve for the fields in the vacuum region near the antenna in three dimensions by finite methods and to match this solution at the plasma-vacuum interface to a solution obtained in the plasma region in one dimension by Fourier methods. This approach has been difficult to carry out because boundary conditions must be imposed at the edge of the finite difference grid on a point-by-point basis, whereas the condition for outgoing energy flux into the plasma is known only in terms of the Fourier transform of the plasma fields. A technique is presented by which a boundary condition can be imposed on the computational grid of a three-dimensional finite difference, or finite element, code by constraining the discrete Fourier transform of the fields at the boundary points to satisfy an outgoing energy flux condition appropriate for the plasma. The boundary condition at a specific grid point appears as a coupling to other grid points on the boundary, with weighting determined by a kemel calctdated from the plasma surface impedance matrix for the various plasma Fourier modes. This boundary condition has been implemented in a finite difference solution of a simple problem in two dimensions, which can also be solved directly by Fourier transformation. Results are presented, and it is shown that the proposed boundary condition does enforce outgoing energy flux and yields the same solution as is obtained by Fourier methods.

  3. Finite difference modelling of dipole acoustic logs in a poroelastic formation with anisotropic permeability (United States)

    He, Xiao; Hu, Hengshan; Wang, Xiuming


    Sedimentary rocks can exhibit strong permeability anisotropy due to layering, pre-stresses and the presence of aligned microcracks or fractures. In this paper, we develop a modified cylindrical finite-difference algorithm to simulate the borehole acoustic wavefield in a saturated poroelastic medium with transverse isotropy of permeability and tortuosity. A linear interpolation process is proposed to guarantee the leapfrog finite difference scheme for the generalized dynamic equations and Darcy's law for anisotropic porous media. First, the modified algorithm is validated by comparison against the analytical solution when the borehole axis is parallel to the symmetry axis of the formation. The same algorithm is then used to numerically model the dipole acoustic log in a borehole with its axis being arbitrarily deviated from the symmetry axis of transverse isotropy. The simulation results show that the amplitudes of flexural modes vary with the dipole orientation because the permeability tensor of the formation is dependent on the wellbore azimuth. It is revealed that the attenuation of the flexural wave increases approximately linearly with the radial permeability component in the direction of the transmitting dipole. Particularly, when the borehole axis is perpendicular to the symmetry axis of the formation, it is possible to estimate the anisotropy of permeability by evaluating attenuation of the flexural wave using a cross-dipole sonic logging tool according to the results of sensitivity analyses. Finally, the dipole sonic logs in a deviated borehole surrounded by a stratified porous formation are modelled using the proposed finite difference code. Numerical results show that the arrivals and amplitudes of transmitted flexural modes near the layer interface are sensitive to the wellbore inclination.

  4. Parallel finite-difference time-domain method

    CERN Document Server

    Yu, Wenhua


    The finite-difference time-domain (FTDT) method has revolutionized antenna design and electromagnetics engineering. This book raises the FDTD method to the next level by empowering it with the vast capabilities of parallel computing. It shows engineers how to exploit the natural parallel properties of FDTD to improve the existing FDTD method and to efficiently solve more complex and large problem sets. Professionals learn how to apply open source software to develop parallel software and hardware to run FDTD in parallel for their projects. The book features hands-on examples that illustrate the power of parallel FDTD and presents practical strategies for carrying out parallel FDTD. This detailed resource provides instructions on downloading, installing, and setting up the required open source software on either Windows or Linux systems, and includes a handy tutorial on parallel programming.

  5. Finite difference methods for coupled flow interaction transport models

    Directory of Open Access Journals (Sweden)

    Shelly McGee


    Full Text Available Understanding chemical transport in blood flow involves coupling the chemical transport process with flow equations describing the blood and plasma in the membrane wall. In this work, we consider a coupled two-dimensional model with transient Navier-Stokes equation to model the blood flow in the vessel and Darcy's flow to model the plasma flow through the vessel wall. The advection-diffusion equation is coupled with the velocities from the flows in the vessel and wall, respectively to model the transport of the chemical. The coupled chemical transport equations are discretized by the finite difference method and the resulting system is solved using the additive Schwarz method. Development of the model and related analytical and numerical results are presented in this work.

  6. ATLAS: A Real-Space Finite-Difference Implementation of Orbital-Free Density Functional Theory

    CERN Document Server

    Mi, Wenhui; Sua, Chuanxun; Zhoua, Yuanyuan; Zhanga, Shoutao; Lia, Quan; Wanga, Hui; Zhang, Lijun; Miao, Maosheng; Wanga, Yanchao; Ma, Yanming


    Orbital-free density functional theory (OF-DFT) is a promising method for large-scale quantum mechanics simulation as it provides a good balance of accuracy and computational cost. Its applicability to large-scale simulations has been aided by progress in constructing kinetic energy functionals and local pseudopotentials. However, the widespread adoption of OF-DFT requires further improvement in its efficiency and robustly implemented software. Here we develop a real-space finite-difference method for the numerical solution of OF-DFT in periodic systems. Instead of the traditional self-consistent method, a powerful scheme for energy minimization is introduced to solve the Euler--Lagrange equation. Our approach engages both the real-space finite-difference method and a direct energy-minimization scheme for the OF-DFT calculations. The method is coded into the ATLAS software package and benchmarked using periodic systems of solid Mg, Al, and Al$_{3}$Mg. The test results show that our implementation can achieve ...

  7. DYNA3D: A nonlinear, explicit, three-dimensional finite element code for solid and structural mechanics, User manual. Revision 1

    Energy Technology Data Exchange (ETDEWEB)

    Whirley, R.G.; Engelmann, B.E.


    This report is the User Manual for the 1993 version of DYNA3D, and also serves as a User Guide. DYNA3D is a nonlinear, explicit, finite element code for analyzing the transient dynamic response of three-dimensional solids and structures. The code is fully vectorized and is available on several computer platforms. DYNA3D includes solid, shell, beam, and truss elements to allow maximum flexibility in modeling physical problems. Many material models are available to represent a wide range of material behavior, including elasticity, plasticity, composites, thermal effects, and rate dependence. In addition, DYNA3D has a sophisticated contact interface capability, including frictional sliding and single surface contact. Rigid materials provide added modeling flexibility. A material model driver with interactive graphics display is incorporated into DYNA3D to permit accurate modeling of complex material response based on experimental data. Along with the DYNA3D Example Problem Manual, this document provides the information necessary to apply DYNA3D to solve a wide range of engineering analysis problems.

  8. Efficient ferromagnetic core impedance model with application to finite-difference time-domain simulation

    Directory of Open Access Journals (Sweden)

    T. C. Genoni


    Full Text Available A frequency-dependent impedance model for laminated ferromagnetic cores is presented and analyzed. The model assumes a multiple-winding ferromagnetic induction core composed of multiple thin layers with linear material response. This model builds on the analysis presented by Rose et al. [Phys. Rev. ST Accel. Beams 13, 090401 (2010PRABFM1098-440210.1103/PhysRevSTAB.13.090401], that determined an equivalent time-dependent resistance that was used to successfully model the loss currents in a linear transformer device cavity containing ferromagnetic cores. The new core impedance model is more general and has been implemented as a surface-impedance boundary condition [K. S. Oh and J. E. Schutt-Aine, IEEE Trans. Antennas Propag. 43, 660 (1995IETPAK0018-926X10.1109/8.391136] which is suitable for use in multidimensional finite-difference time-domain codes.

  9. FDiff3: a finite-difference solver for facilitating understanding of heat conduction and numerical analysis

    Energy Technology Data Exchange (ETDEWEB)

    Russell, M.B. [University of Hertfordshire, Hatfield (United Kingdom). Department of Aerospace, Automotive and Design Engineering; Probert, S.D. [Cranfield University, Bedfordshire (United Kingdom). School of Engineering


    The growing requirement for energy thrift and hence the increasing emphasis on 'low-purchased-energy' designs are stimulating the need for more accurate insights into the thermal behaviours of buildings and their components. This better understanding is preferably achieved, rather than by using 'closed software' or teaching the relevant mathematics outside heat-transfer lessons, but from embedding the pertinent tutoring while dealing with heat-transfer problems using an open-source code approach. Hence a finite-difference software program (FDiff3) has been composed to show the principles of numerical analysis as well as improve the undergraduates' perception of transient conduction. The pedagogic approach behind the development, its present capabilities and applications to sample test-cases are discussed. (author)

  10. The limitations of staggered grid finite differences in plasticity problems (United States)

    Pranger, Casper; Herrendörfer, Robert; Le Pourhiet, Laetitia


    Most crustal-scale applications operate at grid sizes much larger than those at which plasticity occurs in nature. As a consequence, plastic shear bands often localize to the scale of one grid cell, and numerical ploys — like introducing an artificial length scale — are needed to counter this. If for whatever reasons (good or bad) this is not done, we find that problems may arise due to the fact that in the staggered grid finite difference discretization, unknowns like components of the stress tensor and velocity vector are located in physically different positions. This incurs frequent interpolation, reducing the accuracy of the discretization. For purely stress-dependent plasticity problems the adverse effects might be contained because the magnitude of the stress discontinuity across a plastic shear band is limited. However, we find that when rate-dependence of friction is added in the mix, things become ugly really fast and the already hard-to-solve and highly nonlinear problem of plasticity incurs an extra penalty.

  11. A hybrid finite-difference and analytic element groundwater model (United States)

    Haitjema, Henk M.; Feinstein, Daniel T.; Hunt, Randall J.; Gusyev, Maksym


    Regional finite-difference models tend to have large cell sizes, often on the order of 1–2 km on a side. Although the regional flow patterns in deeper formations may be adequately represented by such a model, the intricate surface water and groundwater interactions in the shallower layers are not. Several stream reaches and nearby wells may occur in a single cell, precluding any meaningful modeling of the surface water and groundwater interactions between the individual features. We propose to replace the upper MODFLOW layer or layers, in which the surface water and groundwater interactions occur, by an analytic element model (GFLOW) that does not employ a model grid; instead, it represents wells and surface waters directly by the use of point-sinks and line-sinks. For many practical cases it suffices to provide GFLOW with the vertical leakage rates calculated in the original coarse MODFLOW model in order to obtain a good representation of surface water and groundwater interactions. However, when the combined transmissivities in the deeper (MODFLOW) layers dominate, the accuracy of the GFLOW solution diminishes. For those cases, an iterative coupling procedure, whereby the leakages between the GFLOW and MODFLOW model are updated, appreciably improves the overall solution, albeit at considerable computational cost. The coupled GFLOW–MODFLOW model is applicable to relatively large areas, in many cases to the entire model domain, thus forming an attractive alternative to local grid refinement or inset models.

  12. Finite difference time domain analysis of chirped dielectric gratings (United States)

    Hochmuth, Diane H.; Johnson, Eric G.


    The finite difference time domain (FDTD) method for solving Maxwell's time-dependent curl equations is accurate, computationally efficient, and straight-forward to implement. Since both time and space derivatives are employed, the propagation of an electromagnetic wave can be treated as an initial-value problem. Second-order central-difference approximations are applied to the space and time derivatives of the electric and magnetic fields providing a discretization of the fields in a volume of space, for a period of time. The solution to this system of equations is stepped through time, thus, simulating the propagation of the incident wave. If the simulation is continued until a steady-state is reached, an appropriate far-field transformation can be applied to the time-domain scattered fields to obtain reflected and transmitted powers. From this information diffraction efficiencies can also be determined. In analyzing the chirped structure, a mesh is applied only to the area immediately around the grating. The size of the mesh is then proportional to the electric size of the grating. Doing this, however, imposes an artificial boundary around the area of interest. An absorbing boundary condition must be applied along the artificial boundary so that the outgoing waves are absorbed as if the boundary were absent. Many such boundary conditions have been developed that give near-perfect absorption. In this analysis, the Mur absorbing boundary conditions are employed. Several grating structures were analyzed using the FDTD method.

  13. A finite difference model for free surface gravity drainage

    Energy Technology Data Exchange (ETDEWEB)

    Couri, F.R.; Ramey, H.J. Jr.


    The unconfined gravity flow of liquid with a free surface into a well is a classical well test problem which has not been well understood by either hydrologists or petroleum engineers. Paradigms have led many authors to treat an incompressible flow as compressible flow to justify the delayed yield behavior of a time-drawdown test. A finite-difference model has been developed to simulate the free surface gravity flow of an unconfined single phase, infinitely large reservoir into a well. The model was verified with experimental results in sandbox models in the literature and with classical methods applied to observation wells in the Groundwater literature. The simulator response was also compared with analytical Theis (1935) and Ramey et al. (1989) approaches for wellbore pressure at late producing times. The seepage face in the sandface and the delayed yield behavior were reproduced by the model considering a small liquid compressibility and incompressible porous medium. The potential buildup (recovery) simulated by the model evidenced a different- phenomenon from the drawdown, contrary to statements found in the Groundwater literature. Graphs of buildup potential vs time, buildup seepage face length vs time, and free surface head and sand bottom head radial profiles evidenced that the liquid refills the desaturating cone as a flat moving surface. The late time pseudo radial behavior was only approached after exaggerated long times.

  14. Acoustic Wave Propagation Modeling by a Two-dimensional Finite-difference Summation-by-parts Algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Kim, K. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Petersson, N. A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Rodgers, A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)


    Acoustic waveform modeling is a computationally intensive task and full three-dimensional simulations are often impractical for some geophysical applications such as long-range wave propagation and high-frequency sound simulation. In this study, we develop a two-dimensional high-order accurate finite-difference code for acoustic wave modeling. We solve the linearized Euler equations by discretizing them with the sixth order accurate finite difference stencils away from the boundary and the third order summation-by-parts (SBP) closure near the boundary. Non-planar topographic boundary is resolved by formulating the governing equation in curvilinear coordinates following the interface. We verify the implementation of the algorithm by numerical examples and demonstrate the capability of the proposed method for practical acoustic wave propagation problems in the atmosphere.

  15. A parallel adaptive finite difference algorithm for petroleum reservoir simulation

    Energy Technology Data Exchange (ETDEWEB)

    Hoang, Hai Minh


    Adaptive finite differential for problems arising in simulation of flow in porous medium applications are considered. Such methods have been proven useful for overcoming limitations of computational resources and improving the resolution of the numerical solutions to a wide range of problems. By local refinement of the computational mesh where it is needed to improve the accuracy of solutions, yields better solution resolution representing more efficient use of computational resources than is possible with traditional fixed-grid approaches. In this thesis, we propose a parallel adaptive cell-centered finite difference (PAFD) method for black-oil reservoir simulation models. This is an extension of the adaptive mesh refinement (AMR) methodology first developed by Berger and Oliger (1984) for the hyperbolic problem. Our algorithm is fully adaptive in time and space through the use of subcycling, in which finer grids are advanced at smaller time steps than the coarser ones. When coarse and fine grids reach the same advanced time level, they are synchronized to ensure that the global solution is conservative and satisfy the divergence constraint across all levels of refinement. The material in this thesis is subdivided in to three overall parts. First we explain the methodology and intricacies of AFD scheme. Then we extend a finite differential cell-centered approximation discretization to a multilevel hierarchy of refined grids, and finally we are employing the algorithm on parallel computer. The results in this work show that the approach presented is robust, and stable, thus demonstrating the increased solution accuracy due to local refinement and reduced computing resource consumption. (Author)

  16. High order accurate finite difference schemes based on symmetry preservation (United States)

    Ozbenli, Ersin; Vedula, Prakash


    In this paper, we present a mathematical approach that is based on modified equations and the method of equivariant moving frames for construction of high order accurate invariant finite difference schemes that preserve Lie symmetry groups of underlying partial differential equations (PDEs). In the proposed approach, invariant (or symmetry preserving) numerical schemes with a desired (or fixed) order of accuracy are constructed from some non-invariant (base) numerical schemes. Modified forms of PDEs are used to improve the order of accuracy of existing schemes and these modified forms are obtained through addition of defect correction terms to the original forms of PDEs. These defect correction terms of modified PDEs that are noted from truncation error analysis are either completely removed from schemes or their representation is significantly simplified by considering convenient moving frames. This feature of the proposed method can especially be useful to avoid cumbersome numerical representations when high order schemes are developed from low order ones via the method of modified equations. The proposed method is demonstrated via construction of invariant numerical schemes with fixed (and higher) order of accuracy for some common linear and nonlinear problems (including the linear advection-diffusion equation in 1D and 2D, inviscid Burgers' equation, and viscous Burgers' equation) and the performance of these invariant numerical schemes is further evaluated. Our results indicate that such invariant numerical schemes obtained from existing base numerical schemes have the potential to significantly improve the quality of results not only in terms of desired higher order accuracy but also in the context of preservation of appropriate symmetry properties of underlying PDEs.

  17. Hybrid finite difference/finite element immersed boundary method. (United States)

    E Griffith, Boyce; Luo, Xiaoyu


    The immersed boundary method is an approach to fluid-structure interaction that uses a Lagrangian description of the structural deformations, stresses, and forces along with an Eulerian description of the momentum, viscosity, and incompressibility of the fluid-structure system. The original immersed boundary methods described immersed elastic structures using systems of flexible fibers, and even now, most immersed boundary methods still require Lagrangian meshes that are finer than the Eulerian grid. This work introduces a coupling scheme for the immersed boundary method to link the Lagrangian and Eulerian variables that facilitates independent spatial discretizations for the structure and background grid. This approach uses a finite element discretization of the structure while retaining a finite difference scheme for the Eulerian variables. We apply this method to benchmark problems involving elastic, rigid, and actively contracting structures, including an idealized model of the left ventricle of the heart. Our tests include cases in which, for a fixed Eulerian grid spacing, coarser Lagrangian structural meshes yield discretization errors that are as much as several orders of magnitude smaller than errors obtained using finer structural meshes. The Lagrangian-Eulerian coupling approach developed in this work enables the effective use of these coarse structural meshes with the immersed boundary method. This work also contrasts two different weak forms of the equations, one of which is demonstrated to be more effective for the coarse structural discretizations facilitated by our coupling approach. © 2017 The Authors International  Journal  for  Numerical  Methods  in  Biomedical  Engineering Published by John Wiley & Sons Ltd.

  18. Staggered-Grid Finite Difference Method with Variable-Order Accuracy for Porous Media

    Directory of Open Access Journals (Sweden)

    Jinghuai Gao


    Full Text Available The numerical modeling of wave field in porous media generally requires more computation time than that of acoustic or elastic media. Usually used finite difference methods adopt finite difference operators with fixed-order accuracy to calculate space derivatives for a heterogeneous medium. A finite difference scheme with variable-order accuracy for acoustic wave equation has been proposed to reduce the computation time. In this paper, we develop this scheme for wave equations in porous media based on dispersion relation with high-order staggered-grid finite difference (SFD method. High-order finite difference operators are adopted for low-velocity regions, and low-order finite difference operators are adopted for high-velocity regions. Dispersion analysis and modeling results demonstrate that the proposed SFD method can decrease computational costs without reducing accuracy.

  19. Application of a Strong Tracking Finite-Difference Extended Kalman Filter to Eye Tracking


    Zhang, Zutao; Zhang, Jiashu


    This paper proposes a new eye tracking method using strong finite-difference Kalman filter. Firstly, strong tracking factor is introduced to modify priori covariance matrix to improve the accuracy of the eye tracking algorithm. Secondly, the finite-difference method is proposed to replace partial derivatives of nonlinear functions to eye tracking. From above deduction, the new strong finite-difference Kalman filter becomes very simple because of replacing partial derivatives calculation using...

  20. Evaluation of finite difference and FFT-based solutions of the transport of intensity equation. (United States)

    Zhang, Hongbo; Zhou, Wen-Jing; Liu, Ying; Leber, Donald; Banerjee, Partha; Basunia, Mahmudunnabi; Poon, Ting-Chung


    A finite difference method is proposed for solving the transport of intensity equation. Simulation results show that although slower than fast Fourier transform (FFT)-based methods, finite difference methods are able to reconstruct the phase with better accuracy due to relaxed assumptions for solving the transport of intensity equation relative to FFT methods. Finite difference methods are also more flexible than FFT methods in dealing with different boundary conditions.

  1. A finite-difference modeling of Love channel waves in transversely isotropic medium

    Energy Technology Data Exchange (ETDEWEB)

    Cho, D.H. [Inha Univ., Incheon (Korea, Republic of); Lee, S.S. [Korea Mining Promotion Corp., Seoul (Korea, Republic of)


    The present paper deals with numerical modeling of Love channel waves in transversely isotropic elastic medium. First, an explicit finite-difference scheme of second order approximation is formulated with the wave equation of SH particle displacement in transversely isotropic medium. Since it is a heterogeneous formulation, it should enable efficient modeling of complex model structures without additional treatment of the internal boundary matching. With a model of isotropic coal seam embedded in high velocity host rock, seismograms are synthesized and turn out to be essentially identical with published ones of Korn and Stockl. Next, anisotropic coal seams are investigated. It is found that the horizontal velocity of the seam appears to play a major role of determining the group velocity of Love channel waves. The group velocity increases with the increase of the horizontal velocity or vice versa. However, further study will be needed to exploit fully Love channel waves for the determination of lithology, stratification, fracture in sedimentary rocks, for instance, for hydrocarbon exploration and development. (author). 21 refs., 3 tabs., 10 figs.

  2. A Finite Difference Scheme for Double-Diffusive Unsteady Free Convection from a Curved Surface to a Saturated Porous Medium with a Non-Newtonian Fluid

    KAUST Repository

    El-Amin, Mohamed


    In this paper, a finite difference scheme is developed to solve the unsteady problem of combined heat and mass transfer from an isothermal curved surface to a porous medium saturated by a non-Newtonian fluid. The curved surface is kept at constant temperature and the power-law model is used to model the non-Newtonian fluid. The explicit finite difference method is used to solve simultaneously the equations of momentum, energy and concentration. The consistency of the explicit scheme is examined and the stability conditions are determined for each equation. Boundary layer and Boussinesq approximations have been incorporated. Numerical calculations are carried out for the various parameters entering into the problem. Velocity, temperature and concentration profiles are shown graphically. It is found that as time approaches infinity, the values of wall shear, heat transfer coefficient and concentration gradient at the wall, which are entered in tables, approach the steady state values.

  3. A total variation diminishing finite difference algorithm for sonic boom propagation models (United States)

    Sparrow, Victor W.


    It is difficult to accurately model the rise phases of sonic boom waveforms with traditional finite difference algorithms because of finite difference phase dispersion. This paper introduces the concept of a total variation diminishing (TVD) finite difference method as a tool for accurately modeling the rise phases of sonic booms. A standard second order finite difference algorithm and its TVD modified counterpart are both applied to the one-way propagation of a square pulse. The TVD method clearly outperforms the non-TVD method, showing great potential as a new computational tool in the analysis of sonic boom propagation.

  4. High-Order Entropy Stable Finite Difference Schemes for Nonlinear Conservation Laws: Finite Domains (United States)

    Fisher, Travis C.; Carpenter, Mark H.


    Developing stable and robust high-order finite difference schemes requires mathematical formalism and appropriate methods of analysis. In this work, nonlinear entropy stability is used to derive provably stable high-order finite difference methods with formal boundary closures for conservation laws. Particular emphasis is placed on the entropy stability of the compressible Navier-Stokes equations. A newly derived entropy stable weighted essentially non-oscillatory finite difference method is used to simulate problems with shocks and a conservative, entropy stable, narrow-stencil finite difference approach is used to approximate viscous terms.

  5. Ground motion simulations in Marmara (Turkey) region from 3D finite difference method (United States)

    Aochi, Hideo; Ulrich, Thomas; Douglas, John


    In the framework of the European project MARSite (2012-2016), one of the main contributions from our research team was to provide ground-motion simulations for the Marmara region from various earthquake source scenarios. We adopted a 3D finite difference code, taking into account the 3D structure around the Sea of Marmara (including the bathymetry) and the sea layer. We simulated two moderate earthquakes (about Mw4.5) and found that the 3D structure improves significantly the waveforms compared to the 1D layer model. Simulations were carried out for different earthquakes (moderate point sources and large finite sources) in order to provide shake maps (Aochi and Ulrich, BSSA, 2015), to study the variability of ground-motion parameters (Douglas & Aochi, BSSA, 2016) as well as to provide synthetic seismograms for the blind inversion tests (Diao et al., GJI, 2016). The results are also planned to be integrated in broadband ground-motion simulations, tsunamis generation and simulations of triggered landslides (in progress by different partners). The simulations are freely shared among the partners via the internet and the visualization of the results is diffused on the project's homepage. All these simulations should be seen as a reference for this region, as they are based on the latest knowledge that obtained during the MARSite project, although their refinement and validation of the model parameters and the simulations are a continuing research task relying on continuing observations. The numerical code used, the models and the simulations are available on demand.

  6. Staggered-grid finite-difference acoustic modeling with the Time-Domain Atmospheric Acoustic Propagation Suite (TDAAPS).

    Energy Technology Data Exchange (ETDEWEB)

    Aldridge, David Franklin; Collier, Sandra L. (U.S. Army Research Laboratory); Marlin, David H. (U.S. Army Research Laboratory); Ostashev, Vladimir E. (NOAA/Environmental Technology Laboratory); Symons, Neill Phillip; Wilson, D. Keith (U.S. Army Cold Regions Research Engineering Lab.)


    This document is intended to serve as a users guide for the time-domain atmospheric acoustic propagation suite (TDAAPS) program developed as part of the Department of Defense High-Performance Modernization Office (HPCMP) Common High-Performance Computing Scalable Software Initiative (CHSSI). TDAAPS performs staggered-grid finite-difference modeling of the acoustic velocity-pressure system with the incorporation of spatially inhomogeneous winds. Wherever practical the control structure of the codes are written in C++ using an object oriented design. Sections of code where a large number of calculations are required are written in C or F77 in order to enable better compiler optimization of these sections. The TDAAPS program conforms to a UNIX style calling interface. Most of the actions of the codes are controlled by adding flags to the invoking command line. This document presents a large number of examples and provides new users with the necessary background to perform acoustic modeling with TDAAPS.

  7. Fast finite difference Poisson solvers on heterogeneous architectures (United States)

    Valero-Lara, Pedro; Pinelli, Alfredo; Prieto-Matias, Manuel


    In this paper we propose and evaluate a set of new strategies for the solution of three dimensional separable elliptic problems on CPU-GPU platforms. The numerical solution of the system of linear equations arising when discretizing those operators often represents the most time consuming part of larger simulation codes tackling a variety of physical situations. Incompressible fluid flows, electromagnetic problems, heat transfer and solid mechanic simulations are just a few examples of application areas that require efficient solution strategies for this class of problems. GPU computing has emerged as an attractive alternative to conventional CPUs for many scientific applications. High speedups over CPU implementations have been reported and this trend is expected to continue in the future with improved programming support and tighter CPU-GPU integration. These speedups by no means imply that CPU performance is no longer critical. The conventional CPU-control-GPU-compute pattern used in many applications wastes much of CPU's computational power. Our proposed parallel implementation of a classical cyclic reduction algorithm to tackle the large linear systems arising from the discretized form of the elliptic problem at hand, schedules computing on both the GPU and the CPUs in a cooperative way. The experimental result demonstrates the effectiveness of this approach.

  8. Transfer-matrix approach for finite-difference time-domain simulation of periodic structures. (United States)

    Deinega, Alexei; Belousov, Sergei; Valuev, Ilya


    Optical properties of periodic structures can be calculated using the transfer-matrix approach, which establishes a relation between amplitudes of the wave incident on a structure with transmitted or reflected waves. The transfer matrix can be used to obtain transmittance and reflectance spectra of finite periodic structures as well as eigenmodes of infinite structures. Traditionally, calculation of the transfer matrix is performed in the frequency domain and involves linear algebra. In this work, we present a technique for calculation of the transfer matrix using the finite-difference time-domain (FDTD) method and show the way of its implementation in FDTD code. To illustrate the performance of our technique we calculate the transmittance spectra for opal photonic crystal slabs consisting of multiple layers of spherical scatterers. Our technique can be used for photonic band structure calculations. It can also be combined with existing FDTD methods for the analysis of periodic structures at an oblique incidence, as well as for modeling point sources in a periodic environment.

  9. Parallel 3d Finite-Difference Time-Domain Method on Multi-Gpu Systems (United States)

    Du, Liu-Ge; Li, Kang; Kong, Fan-Min; Hu, Yuan

    Finite-difference time-domain (FDTD) is a popular but computational intensive method to solve Maxwell's equations for electrical and optical devices simulation. This paper presents implementations of three-dimensional FDTD with convolutional perfect match layer (CPML) absorbing boundary conditions on graphics processing unit (GPU). Electromagnetic fields in Yee cells are calculated in parallel millions of threads arranged as a grid of blocks with compute unified device architecture (CUDA) programming model and considerable speedup factors are obtained versus sequential CPU code. We extend the parallel algorithm to multiple GPUs in order to solve electrically large structures. Asynchronous memory copy scheme is used in data exchange procedure to improve the computation efficiency. We successfully use this technique to simulate pointwise source radiation and validate the result by comparison to high precision computation, which shows favorable agreements. With four commodity GTX295 graphics cards on a single personal computer, more than 4000 million Yee cells can be updated in one second, which is hundreds of times faster than traditional CPU computation.

  10. M2Di: MATLAB 2D Stokes solvers using the Finite Difference method (United States)

    Räss, Ludovic; Duretz, Thibault; Schmalholz, Stefan; Podladchikov, Yury


    The study of coupled processes in Earth Sciences leads to the development of multiphysics modelling tools. Mechanical solvers represent the essential ingredient of any of these tools such that their performance and robustness is generally dictated by that of the mechanical solver. Here, we present M2Di, a collection of MATLAB routines designed for studying 2D linear and power law incompressible viscous flow using Finite Difference discretisation. The scripts are written in a concise vectorised MATLAB fashion and rely on fast and robust linear and non-linear solvers (Picard and Newton iterations). As a result, time to solution of 22 seconds for linear viscous flow with 104 viscosity jump on 10002 grid points can be achieved on a standard personal computer. We will present a numerous example of applications that span from high resolution crystal-melt dynamics, deformation of heterogeneous power law viscous fluids, instantaneous mantle flow patterns in cylindrical coordinates, and calculation of pressure gradients around inclusions using variable grid spacing. We use analytical solution for linear viscous flow with highly variable viscosity to validate the linear flow solver. Validation of the non-linear solver is achieved by comparing numerical solution to analytic and benchmark solutions of power law viscous folding and necking. The M2Di codes are open source and can hence be used for research or educational purposes.

  11. Finite difference analysis and experimental validation of 3D photonic crystals for structural health monitoring (United States)

    Piccolo, Valentina; Chiappini, Andrea; Vaccari, Alessandro; Calà Lesina, Antonino; Ferrari, Maurizio; Deseri, Luca; Perry, Marcus; Zonta, Daniele


    In this work, we validate the behavior of 3D Photonic Crystals for Structural Health Monitoring applications. A Finite Difference Time Domain (FDTD) analysis has been performed and compared to experimental data. We demonstrate that the photonic properties of a crystal (comprised of sub-micrometric polystyrene colloidal spheres embedded in a PDMS matrix) change as a function of the axial strain applied to a rubber substrate. The change in the reflected wavelength, detected through our laboratory experiments and equivalent to a visible change in crystal color, is assumed to be caused by changes in the interplanar spacing of the polystyrene beads. This behavior is captured by our full wave 3D FDTD model. This contains different wavelengths in the visible spectrum and the wave amplitudes of the reflected and transmitted secondary beams are then computed. A change in the reflectance or transmittance is observed at every programmed step in which we vary the distance between the spheres. These investigations are an important tool to predict, study and validate our understanding of the behavior of this highly complex physical system. In this context, we have developed a versatile and robust parallelized code, able to numerically model the interaction of light with matter, by directly solving Maxwell's equations in their strong form. The ability to describe the physical behavior of such systems is an important and fundamental capability which will aid the design and validation of innovative photonic sensors.

  12. Explicit Interaction

    DEFF Research Database (Denmark)

    Löwgren, Jonas; Eriksen, Mette Agger; Linde, Per


    as an interpretation of palpability, comprising usability as well as patient empowerment and socially performative issues. We present a prototype environment for video recording during physiotherapeutical consultation which illustrates our current thoughts on explicit interaction and serves as material for further...

  13. Finite-Difference Algorithm for 3D Orthorhombic Elastic Wave Propagation (United States)

    Jensen, R.; Preston, L. A.; Aldridge, D. F.


    Many geophysicists concur that an orthorhombic elastic medium, characterized by three mutually orthogonal symmetry planes, constitutes a realistic representation of seismic anisotropy in shallow crustal rocks. This symmetry condition typically arises via a dense system of vertically-aligned microfractures superimposed on a finely-layered horizontal geology. Mathematically, the elastic stress-strain constitutive relations for an orthorhombic body contain nine independent moduli. In turn, these moduli can be determined by observing (or prescribing) nine independent P-wave and S-wave phase speeds along different propagation directions. We are developing an explicit time-domain finite-difference (FD) algorithm for simulating 3D elastic wave propagation in a heterogeneous orthorhombic medium. The components of the particle velocity vector and the stress tensor are governed by a set of nine, coupled, first-order, linear, partial differential equations (PDEs) called the velocity-stress system. All time and space derivatives are discretized with centered and staggered FD operators possessing second- and fourth-order numerical accuracy, respectively. Simplified FD updating formulae (with significantly reduced operation counts) for stress components are obtained by restricting the principle axes of the modulus tensor to be parallel to the global rectangular coordinate axes. Moreover, restriction to a piecewise homogeneous earth model reduces computational memory demand for storing the ten (including mass density) model parameters. These restrictions will be relaxed in the future. Novel perfectly matched layer (PML) absorbing boundary conditions, specifically designed for orthorhombic media, effectively suppress grid boundary reflections. Initial modeling results reveal the well-established anisotropic seismic phenomena of complex wavefront shapes, split (fast and slow) S-waves, and shear waves generated by a spherically-symmetric explosion in a homogeneous body.

  14. M2Di: Concise and efficient MATLAB 2-D Stokes solvers using the Finite Difference Method (United States)

    Räss, Ludovic; Duretz, Thibault; Podladchikov, Yury Y.; Schmalholz, Stefan M.


    Recent development of many multiphysics modeling tools reflects the currently growing interest for studying coupled processes in Earth Sciences. The core of such tools should rely on fast and robust mechanical solvers. Here we provide M2Di, a set of routines for 2-D linear and power law incompressible viscous flow based on Finite Difference discretizations. The 2-D codes are written in a concise vectorized MATLAB fashion and can achieve a time to solution of 22 s for linear viscous flow on 10002 grid points using a standard personal computer. We provide application examples spanning from finely resolved crystal-melt dynamics, deformation of heterogeneous power law viscous fluids to instantaneous models of mantle flow in cylindrical coordinates. The routines are validated against analytical solution for linear viscous flow with highly variable viscosity and compared against analytical and numerical solutions of power law viscous folding and necking. In the power law case, both Picard and Newton iterations schemes are implemented. For linear Stokes flow and Picard linearization, the discretization results in symmetric positive-definite matrix operators on Cartesian grids with either regular or variable grid spacing allowing for an optimized solving procedure. For Newton linearization, the matrix operator is no longer symmetric and an adequate solving procedure is provided. The reported performance of linear and power law Stokes flow is finally analyzed in terms of wall time. All MATLAB codes are provided and can readily be used for educational as well as research purposes. The M2Di routines are available from Bitbucket and the University of Lausanne Scientific Computing Group website, and are also supplementary material to this article.

  15. Discretely Conservative Finite-Difference Formulations for Nonlinear Conservation Laws in Split Form: Theory and Boundary Conditions (United States)

    Fisher, Travis C.; Carpenter, Mark H.; Nordstroem, Jan; Yamaleev, Nail K.; Swanson, R. Charles


    Simulations of nonlinear conservation laws that admit discontinuous solutions are typically restricted to discretizations of equations that are explicitly written in divergence form. This restriction is, however, unnecessary. Herein, linear combinations of divergence and product rule forms that have been discretized using diagonal-norm skew-symmetric summation-by-parts (SBP) operators, are shown to satisfy the sufficient conditions of the Lax-Wendroff theorem and thus are appropriate for simulations of discontinuous physical phenomena. Furthermore, special treatments are not required at the points that are near physical boundaries (i.e., discrete conservation is achieved throughout the entire computational domain, including the boundaries). Examples are presented of a fourth-order, SBP finite-difference operator with second-order boundary closures. Sixth- and eighth-order constructions are derived, and included in E. Narrow-stencil difference operators for linear viscous terms are also derived; these guarantee the conservative form of the combined operator.

  16. Finite-difference algorithms for the time-domain Maxwell's equations - A numerical approach to RCS analysis (United States)

    Vinh, Hoang; Dwyer, Harry A.; Van Dam, C. P.


    The applications of two CFD-based finite-difference methods to computational electromagnetics are investigated. In the first method, the time-domain Maxwell's equations are solved using the explicit Lax-Wendroff scheme and in the second method, the second-order wave equations satisfying the Maxwell's equations are solved using the implicit Crank-Nicolson scheme. The governing equations are transformed to a generalized curvilinear coordinate system and solved on a body-conforming mesh using the scattered-field formulation. The induced surface current and the bistatic radar cross section are computed and the results are validated for several two-dimensional test cases involving perfectly-conducting scatterers submerged in transverse-magnetic plane waves.

  17. Similarity and generalized finite-difference solutions of parabolic partial differential equations. (United States)

    Clausing, A. M.


    Techniques are presented for obtaining generalized finite-difference solutions to partial differential equations of the parabolic type. It is shown that the advantages of similarity in the solution of similar problems are generally not lost if the solution to the original partial differential equations is effected in the physical plane by finite-difference methods. The analysis results in a considerable saving in computational effort in the solution of both similar and nonsimilar problems. Several examples, including both the heat-conduction equation and the boundary-layer equations, are given. The analysis also provides a practical means of estimating the accuracy of finite-difference solutions to parabolic equations.

  18. High-order weighted essentially nonoscillatory finite-difference formulation of the lattice Boltzmann method in generalized curvilinear coordinates. (United States)

    Hejranfar, Kazem; Saadat, Mohammad Hossein; Taheri, Sina


    In this work, a high-order weighted essentially nonoscillatory (WENO) finite-difference lattice Boltzmann method (WENOLBM) is developed and assessed for an accurate simulation of incompressible flows. To handle curved geometries with nonuniform grids, the incompressible form of the discrete Boltzmann equation with the Bhatnagar-Gross-Krook (BGK) approximation is transformed into the generalized curvilinear coordinates and the spatial derivatives of the resulting lattice Boltzmann equation in the computational plane are solved using the fifth-order WENO scheme. The first-order implicit-explicit Runge-Kutta scheme and also the fourth-order Runge-Kutta explicit time integrating scheme are adopted for the discretization of the temporal term. To examine the accuracy and performance of the present solution procedure based on the WENOLBM developed, different benchmark test cases are simulated as follows: unsteady Taylor-Green vortex, unsteady doubly periodic shear layer flow, steady flow in a two-dimensional (2D) cavity, steady cylindrical Couette flow, steady flow over a 2D circular cylinder, and steady and unsteady flows over a NACA0012 hydrofoil at different flow conditions. Results of the present solution are compared with the existing numerical and experimental results which show good agreement. To show the efficiency and accuracy of the solution methodology, the results are also compared with the developed second-order central-difference finite-volume lattice Boltzmann method and the compact finite-difference lattice Boltzmann method. It is shown that the present numerical scheme is robust, efficient, and accurate for solving steady and unsteady incompressible flows even at high Reynolds number flows.

  19. A non-linear constrained optimization technique for the mimetic finite difference method

    Energy Technology Data Exchange (ETDEWEB)

    Manzini, Gianmarco [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Svyatskiy, Daniil [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Bertolazzi, Enrico [Univ. of Trento (Italy); Frego, Marco [Univ. of Trento (Italy)


    This is a strategy for the construction of monotone schemes in the framework of the mimetic finite difference method for the approximation of diffusion problems on unstructured polygonal and polyhedral meshes.

  20. A finite difference method for nonlinear parabolic-elliptic systems of second order partial differential equations


    Marian Malec; Lucjan Sapa


    This paper deals with a finite difference method for a wide class of weakly coupled nonlinear second-order partial differential systems with initial condition and weakly coupled nonlinear implicit boundary conditions. One part of each system is of the parabolic type (degenerated parabolic equations) and the other of the elliptic type (equations with a parameter) in a cube in \\(\\mathbf{R}^{1+n}\\). A suitable finite difference scheme is constructed. It is proved that the scheme has a unique sol...

  1. Error Estimation Methods for the Finite-Difference Solution for Poisson’s Equation


    Omar, Haji Omar


    The finite-difference method is universally used for the approximation of differential equations. In this thesis two different approaches are reviewed for the error estimation of the approximation of the Dirichlet problem for elliptic equations, specifically Poisson’s and Laplace’s equations using various finite-difference schemes. The first approach is based on the difference analogue of the maximum principle. Applying Gerschgorin’s majorant method to the analysis , also the order of a...

  2. Auralization of concert hall acoustics using finite difference time domain methods and wave field synthesis (United States)

    Hochgraf, Kelsey

    Auralization methods have been used for a long time to simulate the acoustics of a concert hall for different seat positions. The goal of this thesis was to apply the concept of auralization to a larger audience area that the listener could walk through to compare differences in acoustics for a wide range of seat positions. For this purpose, the acoustics of Rensselaer's Experimental Media and Performing Arts Center (EMPAC) Concert Hall were simulated to create signals for a 136 channel wave field synthesis (WFS) system located at Rensselaer's Collaborative Research Augmented Immersive Virtual Environment (CRAIVE) Laboratory. By allowing multiple people to dynamically experience the concert hall's acoustics at the same time, this research gained perspective on what is important for achieving objective accuracy and subjective plausibility in an auralization. A finite difference time domain (FDTD) simulation on a three-dimensional face-centered cubic grid, combined at a crossover frequency of 800 Hz with a CATT-Acoustic(TM) simulation, was found to have a reverberation time, direct to reverberant sound energy ratio, and early reflection pattern that more closely matched measured data from the hall compared to a CATT-Acoustic(TM) simulation and other hybrid simulations. In the CRAIVE lab, nine experienced listeners found all hybrid auralizations (with varying source location, grid resolution, crossover frequency, and number of loudspeakers) to be more perceptually plausible than the CATT-Acoustic(TM) auralization. The FDTD simulation required two days to compute, while the CATT-Acoustic(TM) simulation required three separate TUCT(TM) computations, each taking four hours, to accommodate the large number of receivers. Given the perceptual advantages realized with WFS for auralization of a large, inhomogeneous sound field, it is recommended that hybrid simulations be used in the future to achieve more accurate and plausible auralizations. Predictions are made for a

  3. Accuracy of finite-difference harmonic frequencies in density functional theory. (United States)

    Liu, Kuan-Yu; Liu, Jie; Herbert, John M


    Analytic Hessians are often viewed as essential for the calculation of accurate harmonic frequencies, but the implementation of analytic second derivatives is nontrivial and solution of the requisite coupled-perturbed equations engenders a sizable memory footprint for large systems, given that these equations are not required for energy and gradient calculations in density functional theory. Here, we benchmark the alternative approach to harmonic frequencies based on finite differences of analytic first derivatives, a procedure that is amenable to large-scale parallelization. Not only for absolute frequencies but also for isotopic and conformer-dependent frequency shifts in flexible molecules, we find that the finite-difference approach exhibits mean errors finite-difference error can be larger, but even in these cases the errors can be reduced below 0.1 cm-1 by judicious choice of the displacement step size and a higher-order finite-difference approach. The surprising accuracy and robustness of the finite-difference results suggests that availability of the analytic Hessian is not so important in today's era of commodity processors that are readily available in large numbers. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  4. Improving sub-grid scale accuracy of boundary features in regional finite-difference models (United States)

    Panday, Sorab; Langevin, Christian D.


    As an alternative to grid refinement, the concept of a ghost node, which was developed for nested grid applications, has been extended towards improving sub-grid scale accuracy of flow to conduits, wells, rivers or other boundary features that interact with a finite-difference groundwater flow model. The formulation is presented for correcting the regular finite-difference groundwater flow equations for confined and unconfined cases, with or without Newton Raphson linearization of the nonlinearities, to include the Ghost Node Correction (GNC) for location displacement. The correction may be applied on the right-hand side vector for a symmetric finite-difference Picard implementation, or on the left-hand side matrix for an implicit but asymmetric implementation. The finite-difference matrix connectivity structure may be maintained for an implicit implementation by only selecting contributing nodes that are a part of the finite-difference connectivity. Proof of concept example problems are provided to demonstrate the improved accuracy that may be achieved through sub-grid scale corrections using the GNC schemes.

  5. Validation of finite difference core diffusion calculation methods with FEM and NEM for VVER-1000 MWe reactor

    Energy Technology Data Exchange (ETDEWEB)

    Jagannathan, V. [Light Water Reactor Physics Section, Reactor Physics Design Div., Bhabha Atomic Research Centre, Mumbai - 400 085 (India); RPDD, Central Complex, BARC, Mumbai - 400085 (India); Singh, T. [Reactor Physics and Nuclear Engineering Section, Reactor Group, BARC, Mumbai (India); Pal, U.; Karthikeyan, R. [Light Water Reactor Physics Section, Reactor Physics Design Div., Bhabha Atomic Research Centre, Mumbai - 400 085 (India); Sundaram, G. [Nuclear Safety Group, KK-NPC, Mumbai (India)


    India is developing several in-house fuel management codes for the design evaluation of WER-1000 M We reactors, being built at Kudankulam, Tamil Nadu in collaboration with Russian Federation. A lattice burnup code EXCEL provides the few group lattice parameters of various fuel assembly types constituting the core. The core diffusion analyses have been performed by two methods. In the first method the entire fuel assembly is treated as a single homogenized cell. Each fuel assembly cell is divided into 6n{sup 2} triangles, where 'n' is the number of uniform divisions on a side of the hexagon. Regular triangular meshes are used in the active core as well as in surrounding reflector regions. This method is incorporated in the code TRIHEXFA. In the second method a pin by pin description of the core is accomplished by considering the few group lattice parameters generated by EXCEL code for various fuel and non-fuel cells in each fuel assembly. Regular hexagonal cells of one pin pitch are considered in the core and reflector regions. This method is incorporated in HEXPIN code. Both these codes use centre mesh finite difference method (FDM) for regular triangular or hexagonal meshes. It is well known that the large size of the WER fuel assembly, the zigzag structure of the core-baffle zone, the distribution of water tubes of different diameter in this baffle zone and the surrounding steel and water layers of different thickness, all lead to a very complex description of the core-reflector interface. We are analyzing the WER core in fresh state by two other approaches to obtain independent benchmark reference solutions. They are finite element method (FEM) and nodal expansion method (NEM). The few group cross sections of EXCEL are used in the FEM and NEM analyses. The paper would present the comparison of the results of core followup simulations of FD codes with those of FEM and NEM analyses. (authors)

  6. Time-domain finite-difference based analysis of induced crosstalk in multiwall carbon nanotube interconnects (United States)

    Kumar, Amit; Nehra, Vikas; Kaushik, Brajesh Kumar


    Graphene rolled-up cylindrical sheets i.e. carbon nanotubes (CNTs) is one of the finest and emerging research area. This paper presents the investigation of induced crosstalk in coupled on-chip multiwalled carbon nanotube (MWCNT) interconnects using finite-difference analysis (FDA) in time-domain i.e. the finite-difference time-domain (FDTD) method. The exceptional properties of versatile MWCNTs profess their candidacy to replace conventional on-chip copper interconnects. Time delay and crosstalk noise have been evaluated for coupled on-chip MWCNT interconnects. With a decrease in CNT length, the obtained results for an MWCNT shows that transmission performance improves as the number of shells increases. It has been observed that the obtained results using the finite-difference time domain (FDTD) technique shows a very close match with the HSPICE simulated results.

  7. Conservative arbitrary order finite difference schemes for shallow-water flows (United States)

    Skiba, Yuri N.; Filatov, Denis M.


    The classical nonlinear shallow-water model (SWM) of an ideal fluid is considered. For the model, a new method for the construction of mass and total energy conserving finite difference schemes is suggested. In fact, it produces an infinite family of finite difference schemes, which are either linear or nonlinear depending on the choice of certain parameters. The developed schemes can be applied in a variety of domains on the plane and on the sphere. The method essentially involves splitting of the model operator by geometric coordinates and by physical processes, which provides substantial benefits in the computational cost of solution. Besides, in case of the whole sphere it allows applying the same algorithms as in a doubly periodic domain on the plane and constructing finite difference schemes of arbitrary approximation order in space. Results of numerical experiments illustrate the skillfulness of the schemes in describing the shallow-water dynamics.

  8. A generalized finite difference method using Coatmèlec lattices (United States)

    García-March, Miguel A.; Arevalillo-Herráez, Miguel; Villatoro, Francisco R.; Giménez, Fernando; de Córdoba, Pedro Fernández


    Generalized finite difference methods require that a properly posed set of nodes exists around each node in the mesh, so that the solution for the corresponding multivariate interpolation problem be unique. In this paper we first show that the construction of these meshes can be computerized using a relatively simple algorithm based on the concept of a Coatmèlec lattice. Then, we present a generalized finite difference method which provides a numerical solution of a partial differential equation over an arbitrary domain, using the generated meshes. The accuracy and mesh adaptivity of the method is evaluated using elliptical equations in several domains.

  9. Introduction to the Finite-Difference Time-Domain (FDTD) Method for Electromagnetics

    CERN Document Server

    Gedney, Stephen


    Introduction to the Finite-Difference Time-Domain (FDTD) Method for Electromagnetics provides a comprehensive tutorial of the most widely used method for solving Maxwell's equations -- the Finite Difference Time-Domain Method. This book is an essential guide for students, researchers, and professional engineers who want to gain a fundamental knowledge of the FDTD method. It can accompany an undergraduate or entry-level graduate course or be used for self-study. The book provides all the background required to either research or apply the FDTD method for the solution of Maxwell's equations to p

  10. Numerical solution of a diffusion problem by exponentially fitted finite difference methods. (United States)

    D'Ambrosio, Raffaele; Paternoster, Beatrice


    This paper is focused on the accurate and efficient solution of partial differential differential equations modelling a diffusion problem by means of exponentially fitted finite difference numerical methods. After constructing and analysing special purpose finite differences for the approximation of second order partial derivatives, we employed them in the numerical solution of a diffusion equation with mixed boundary conditions. Numerical experiments reveal that a special purpose integration, both in space and in time, is more accurate and efficient than that gained by employing a general purpose solver.

  11. An implicit logarithmic finite-difference technique for two dimensional coupled viscous Burgers’ equation

    Directory of Open Access Journals (Sweden)

    Vineet K. Srivastava


    Full Text Available This article describes a new implicit finite-difference method: an implicit logarithmic finite-difference method (I-LFDM, for the numerical solution of two dimensional time-dependent coupled viscous Burgers’ equation on the uniform grid points. As the Burgers’ equation is nonlinear, the proposed technique leads to a system of nonlinear systems, which is solved by Newton's iterative method at each time step. Computed solutions are compared with the analytical solutions and those already available in the literature and it is clearly shown that the results obtained using the method is precise and reliable for solving Burgers’ equation.

  12. Energies and wave functions of an off-centre donor in hemispherical quantum dot: Two-dimensional finite difference approach and ritz variational principle

    Energy Technology Data Exchange (ETDEWEB)

    Nakra Mohajer, Soukaina; El Harouny, El Hassan [Laboratoire de Physique de la Matière Condensée, Département de Physique, Faculté des Sciences, Université Abdelmalek Essaadi, B.P. 2121 M’Hannech II, 93030 Tétouan (Morocco); Ibral, Asmaa [Equipe d’Optique et Electronique du Solide, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida Principale, El Jadida (Morocco); Laboratoire d’Instrumentation, Mesure et Contrôle, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida Principale, El Jadida (Morocco); El Khamkhami, Jamal [Laboratoire de Physique de la Matière Condensée, Département de Physique, Faculté des Sciences, Université Abdelmalek Essaadi, B.P. 2121 M’Hannech II, 93030 Tétouan (Morocco); and others


    Eigenvalues equation solutions of a hydrogen-like donor impurity, confined in a hemispherical quantum dot deposited on a wetting layer and capped by an insulating matrix, are determined in the framework of the effective mass approximation. Conduction band alignments at interfaces between quantum dot and surrounding materials are described by infinite height barriers. Ground and excited states energies and wave functions are determined analytically and via one-dimensional finite difference approach in case of an on-center donor. Donor impurity is then moved from center to pole of hemispherical quantum dot and eigenvalues equation is solved via Ritz variational principle, using a trial wave function where Coulomb attraction between electron and ionized donor is taken into account, and by two-dimensional finite difference approach. Numerical codes developed enable access to variations of donor total energy, binding energy, Coulomb correlation parameter, spatial extension and radial probability density with respect to hemisphere radius and impurity position inside the quantum dot.

  13. A GPGPU based program to solve the TDSE in intense laser fields through the finite difference approach

    CERN Document Server

    Broin, Cathal Ó


    We present a General-purpose computing on graphics processing units (GPGPU) based computational program and framework for the electronic dynamics of atomic systems under intense laser fields. We present our results using the case of hydrogen, however the code is trivially extensible to tackle problems within the single-active electron (SAE) approximation. Building on our previous work, we introduce the first available GPGPU based implementation of the Taylor, Runge-Kutta and Lanczos based methods created with strong field ab-initio simulations specifically in mind; CLTDSE. The code makes use of finite difference methods and the OpenCL framework for GPU acceleration. The specific example system used is the classic test system; Hydrogen. After introducing the standard theory, and specific quantities which are calculated, the code, including installation and usage, is discussed in-depth. This is followed by some examples and a short benchmark between an 8 hardware thread (i.e logical core) Intel Xeon CPU and an ...

  14. Construction of finite difference schemes having special properties for ordinary and partial differential equations (United States)

    Mickens, R. E.


    Work on the construction of finite difference models of differential equations having zero truncation errors is summarized. Both linear and nonlinear unidirectional wave equations are discussed. Results regarding the construction of zero truncation error schemes for the full wave equation and Burger's equation are also briefly reported.

  15. Efficiency Benchmarking of an Energy Stable High-Order Finite Difference Discretization

    NARCIS (Netherlands)

    van der Weide, Edwin Theodorus Antonius; Giangaspero, G.; Svärd, M


    In this paper, results are presented for a number of benchmark cases, proposed at the 2nd International Workshop on High-Order CFD Methods in Cologne, Germany, in 2013. A robust high-order-accurate finite difference method was used that was developed during the last 10–15 years. The robustness stems

  16. Propagation of 3-D Beams Using a Finite-Difference Algorithm: Practical Considerations (United States)


    difference optical propagation, including non-paraxial methods, was reviewed and augmented by Bekker .2 2. FINITE DIFFERENCE APPROXIMATION TO THE...unstable resonator calculations with laser medium,” Applied Optics 13(11), 2546–2561 (1974). [2] Bekker , E. V., et al., “Wide-angle alternating-direction

  17. A coupled boundary element-finite difference solution of the elliptic modified mild slope equation

    DEFF Research Database (Denmark)

    Naserizadeh, R.; Bingham, Harry B.; Noorzad, A.


    The modified mild slope equation of [5] is solved using a combination of the boundary element method (BEM) and the finite difference method (FDM). The exterior domain of constant depth and infinite horizontal extent is solved by a BEM using linear or quadratic elements. The interior domain...

  18. The finite difference time domain method on a massively parallel computer

    NARCIS (Netherlands)

    Ewijk, L.J. van


    At the Physics and Electronics Laboratory TNO much research is done in the field of computational electromagnetics (CEM). One of the tools in this field is the Finite Difference Time Domain method (FDTD), a method that has been implemented in a program in order to be able to compute electromagnetic

  19. A Comparison of Continuous Mass-lumped Finite Elements and Finite Differences for 3D

    NARCIS (Netherlands)

    Zhebel, E.; Minisini, S.; Kononov, A.; Mulder, W.A.


    The finite-difference method is widely used for time-domain modelling of the wave equation because of its ease of implementation of high-order spatial discretization schemes, parallelization and computational efficiency. However, finite elements on tetrahedral meshes are more accurate in complex

  20. A new fitted operator finite difference method to solve systems of ...

    African Journals Online (AJOL)

    In recent years, fitted operator finite difference methods (FOFDMs) have been developed for numerous types of singularly perturbed ordinary differential equations. The construction of most of these methods differed though the final outcome remained similar. The most crucial aspect was how the difference operator was ...

  1. Convection in a vertical channel - A finite-difference and an integral method (United States)

    Mata, C. M.; Saraiva, J. A. Gil

    A numerical study of an air vertical solar collector is presented. Two different methods were used: a finite-difference scheme with a rectangular grid and an integral method based on analytic-experimental correlations involving nondimensional parameters. Constant heat flux conditions were assumed, and radiation conditions can be integrated. Each method's advantages are enhanced.


    A hybrid of the finite-difference method and the discrete-wavenumber method is developed to calculate radar traces. The method is based on a three-dimensional model defined in the Cartesian coordinate system; the electromag-netic properties of the model are symmetric with respect...

  3. Stability of finite difference schemes for generalized von Foerster equations with renewal

    Directory of Open Access Journals (Sweden)

    Henryk Leszczyński


    Full Text Available We consider a von Foerster-type equation describing the dynamics of a population with the production of offsprings given by the renewal condition. We construct a finite difference scheme for this problem and give sufficient conditions for its stability with respect to \\(l^1\\ and \\(l^\\infty\\ norms.

  4. A smart nonstandard finite difference scheme for second order nonlinear boundary value problems

    NARCIS (Netherlands)

    Erdogan, Utku; Ozis, Turgut


    A new kind of finite difference scheme is presented for special second order nonlinear two point boundary value problems. An artificial parameter is introduced in the scheme. Symbolic computation is proposed for the construction of the scheme. Local truncation error of the method is discussed.

  5. High-order Finite Difference Solution of Euler Equations for Nonlinear Water Waves

    DEFF Research Database (Denmark)

    Christiansen, Torben Robert Bilgrav; Bingham, Harry B.; Engsig-Karup, Allan Peter


    is discretized using arbitrary-order finite difference schemes on a staggered grid with one optional stretching in each coordinate direction. The momentum equations and kinematic free surface condition are integrated in time using the classic fourth-order Runge-Kutta scheme. Mass conservation is satisfied...

  6. New explicit methods for the numerical solution of diffusion problems (United States)

    Evans, David J.

    In this survey paper, Part 1 is concerned with new explicit methods for the finite difference solution of a parabolic partial differential equation in 1 space dimension. The new methods use stable asymmetric approximations to the partial differential equation which when coupled in groups of 2 adjacent points on the grid result in implicit equations which can be easily converted to explicit form which in turn offer many advantages. By judicious use of alternating this strategy on the grid points of the domain results in an algorithm which possesses unconditional stability. Part II briefly surveys existing methods and then an explicit finite difference approximation procedure which is unconditionally stable for the solution of the two-dimensional nonhomogeneous diffusion equation is presented. This method possesses the advantages of the implicit methods, i.e., no severe limitation on the size of the time increment.

  7. High‐order rotated staggered finite difference modeling of 3D elastic wave propagation in general anisotropic media

    KAUST Repository

    Chu, Chunlei


    We analyze the dispersion properties and stability conditions of the high‐order convolutional finite difference operators and compare them with the conventional finite difference schemes. We observe that the convolutional finite difference method has better dispersion properties and becomes more efficient than the conventional finite difference method with the increasing order of accuracy. This makes the high‐order convolutional operator a good choice for anisotropic elastic wave simulations on rotated staggered grids since its enhanced dispersion properties can help to suppress the numerical dispersion error that is inherent in the rotated staggered grid structure and its efficiency can help us tackle 3D problems cost‐effectively.

  8. Three-Dimensional Finite Difference Simulation of Ground Motions from the August 24, 2014 South Napa Earthquake

    Energy Technology Data Exchange (ETDEWEB)

    Rodgers, Arthur J. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Univ. of California, Berkeley, CA (United States); Dreger, Douglas S. [Univ. of California, Berkeley, CA (United States); Pitarka, Arben [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)


    We performed three-dimensional (3D) anelastic ground motion simulations of the South Napa earthquake to investigate the performance of different finite rupture models and the effects of 3D structure on the observed wavefield. We considered rupture models reported by Dreger et al. (2015), Ji et al., (2015), Wei et al. (2015) and Melgar et al. (2015). We used the SW4 anelastic finite difference code developed at Lawrence Livermore National Laboratory (Petersson and Sjogreen, 2013) and distributed by the Computational Infrastructure for Geodynamics. This code can compute the seismic response for fully 3D sub-surface models, including surface topography and linear anelasticity. We use the 3D geologic/seismic model of the San Francisco Bay Area developed by the United States Geological Survey (Aagaard et al., 2008, 2010). Evaluation of earlier versions of this model indicated that the structure can reproduce main features of observed waveforms from moderate earthquakes (Rodgers et al., 2008; Kim et al., 2010). Simulations were performed for a domain covering local distances (< 25 km) and resolution providing simulated ground motions valid to 1 Hz.

  9. Thermal Analysis of AC Contactor Using Thermal Network Finite Difference Analysis Method (United States)

    Niu, Chunping; Chen, Degui; Li, Xingwen; Geng, Yingsan

    To predict the thermal behavior of switchgear quickly, the Thermal Network Finite Difference Analysis method (TNFDA) is adopted in thermal analysis of AC contactor in the paper. The thermal network model is built with nodes, thermal resistors and heat generators, and it is solved using finite difference method (FDM). The main circuit and the control system are connected by thermal resistors network, which solves the problem of multi-sources interaction in the application of TNFDA. The temperature of conducting wires is calculated according to the heat transfer process and the fundamental equations of thermal conduction. It provides a method to solve the problem of boundary conditions in applying the TNFDA. The comparison between the results of TNFDA and measurements shows the feasibility and practicability of the method.

  10. Finite difference analysis of torsional vibrations of pretwisted, rotating, cantilever beams with effects of warping (United States)

    Subrahmanyam, K. B.; Kaza, K. R. V.


    Theoretical natural frequencies of the first three modes of torsional vibration of pretwisted, rotating cantilever beams are determined for various thickness and aspect ratios. Conclusions concerning individual and collective effects of warping, pretwist, tension-torsion coupling and tennis racket effect (twist-rotational coupling) terms on the natural frequencies are drawn from numerical results obtained by using a finite difference procedure with first order central differences. The relative importance of structural warping, inertial warping, pretwist, tension-torsion and twist-rotational coupling terms is discussed for various rotational speeds. The accuracy of results obtained by using the finite difference approach is verified by a comparison with the exact solution for specialized simple cases of the equation of motion used in this paper.

  11. A finite difference method for nonlinear parabolic-elliptic systems of second order partial differential equations

    Directory of Open Access Journals (Sweden)

    Marian Malec


    Full Text Available This paper deals with a finite difference method for a wide class of weakly coupled nonlinear second-order partial differential systems with initial condition and weakly coupled nonlinear implicit boundary conditions. One part of each system is of the parabolic type (degenerated parabolic equations and the other of the elliptic type (equations with a parameter in a cube in \\(\\mathbf{R}^{1+n}\\. A suitable finite difference scheme is constructed. It is proved that the scheme has a unique solution, and the numerical method is consistent, convergent and stable. The error estimate is given. Moreover, by the method, the differential problem has at most one classical solution. The proof is based on the Banach fixed-point theorem, the maximum principle for difference functional systems of the parabolic type and some new difference inequalities. It is a new technique of studying the mixed-type systems. Examples of physical applications and numerical experiments are presented.

  12. Energy stable and high-order-accurate finite difference methods on staggered grids (United States)

    O'Reilly, Ossian; Lundquist, Tomas; Dunham, Eric M.; Nordström, Jan


    For wave propagation over distances of many wavelengths, high-order finite difference methods on staggered grids are widely used due to their excellent dispersion properties. However, the enforcement of boundary conditions in a stable manner and treatment of interface problems with discontinuous coefficients usually pose many challenges. In this work, we construct a provably stable and high-order-accurate finite difference method on staggered grids that can be applied to a broad class of boundary and interface problems. The staggered grid difference operators are in summation-by-parts form and when combined with a weak enforcement of the boundary conditions, lead to an energy stable method on multiblock grids. The general applicability of the method is demonstrated by simulating an explosive acoustic source, generating waves reflecting against a free surface and material discontinuity.

  13. Analysis for pressure transient of coalbed methane reservoir based on Laplace transform finite difference method

    Directory of Open Access Journals (Sweden)

    Lei Wang


    Full Text Available Based on fractal geometry, fractal medium of coalbed methane mathematical model is established by Langmuir isotherm adsorption formula, Fick's diffusion law, Laplace transform formula, considering the well bore storage effect and skin effect. The Laplace transform finite difference method is used to solve the mathematical model. With Stehfest numerical inversion, the distribution of dimensionless well bore flowing pressure and its derivative was obtained in real space. According to compare with the results from the analytical method, the result from Laplace transform finite difference method turns out to be accurate. The influence factors are analyzed, including fractal dimension, fractal index, skin factor, well bore storage coefficient, energy storage ratio, interporosity flow coefficient and the adsorption factor. The calculating error of Laplace transform difference method is small. Laplace transform difference method has advantages in well-test application since any moment simulation does not rely on other moment results and space grid.

  14. Convergence of finite differences schemes for viscous and inviscid conservation laws with rough coefficients

    Energy Technology Data Exchange (ETDEWEB)

    Karlsen, Kenneth Hvistendal; Risebro, Nils Henrik


    We consider the initial value problem for degenerate viscous and inviscid scalar conservation laws where the flux function depends on the spatial location through a ''rough'' coefficient function k(x). we show that the Engquist-Osher (and hence all monotone) finite difference approximations converge to the unique entropy solution of the governing equation if, among other demands, k' is in BV, thereby providing alternative (new) existence proofs for entropy solutions of degenerate convection-diffusion equations as well as new convergence results for their finite difference approximations. In the inviscid case, we also provide a rate of convergence. Our convergence proofs are based on deriving a series of a priori estimates and using a general L{sup p} compactness criterion. (author)

  15. Analysis of Finite Difference Discretization Schemes for Diffusion in Spheres with Variable Diffusivity. (United States)

    Versypt, Ashlee N Ford; Braatz, Richard D


    Two finite difference discretization schemes for approximating the spatial derivatives in the diffusion equation in spherical coordinates with variable diffusivity are presented and analyzed. The numerical solutions obtained by the discretization schemes are compared for five cases of the functional form for the variable diffusivity: (I) constant diffusivity, (II) temporally-dependent diffusivity, (III) spatially-dependent diffusivity, (IV) concentration-dependent diffusivity, and (V) implicitly-defined, temporally- and spatially-dependent diffusivity. Although the schemes have similar agreement to known analytical or semi-analytical solutions in the first four cases, in the fifth case for the variable diffusivity, one scheme produces a stable, physically reasonable solution, while the other diverges. We recommend the adoption of the more accurate and stable of these finite difference discretization schemes to numerically approximate the spatial derivatives of the diffusion equation in spherical coordinates for any functional form of variable diffusivity, especially cases where the diffusivity is a function of position.

  16. Linear finite-difference bond graph model of an ionic polymer actuator (United States)

    Bentefrit, M.; Grondel, S.; Soyer, C.; Fannir, A.; Cattan, E.; Madden, J. D.; Nguyen, T. M. G.; Plesse, C.; Vidal, F.


    With the recent growing interest for soft actuation, many new types of ionic polymers working in air have been developed. Due to the interrelated mechanical, electrical, and chemical properties which greatly influence the characteristics of such actuators, their behavior is complex and difficult to understand, predict and optimize. In light of this challenge, an original linear multiphysics finite difference bond graph model was derived to characterize this ionic actuation. This finite difference scheme was divided into two coupled subparts, each related to a specific physical, electrochemical or mechanical domain, and then converted into a bond graph model as this language is particularly suited for systems from multiple energy domains. Simulations were then conducted and a good agreement with the experimental results was obtained. Furthermore, an analysis of the power efficiency of such actuators as a function of space and time was proposed and allowed to evaluate their performance.

  17. Solving moving interface problems using a higher order accurate finite difference scheme (United States)

    Mittal, H. V. R.; Ray, Rajendra K.


    A new finite difference scheme is applied to solve partial differential equations in domains with discontinuities due to the presence of time dependent moving or deforming interfaces. This scheme is an extension of the finite difference idea developed for solving incompressible, steady stokes equations in discontinuous domains with fixed interfaces [1]. This new idea is applied at the irregular points at each time step in conjunction with the Crank-Nicolson (CN) implicit scheme and a recently developed Higher Order Compact (HOC) scheme at regular points. For validation, Stefan's problem is considered with a moving interface in one dimension. In two dimensions, heat equation is considered on a square domain with a circular interface whose radius is continuously changing with time. HOC scheme is found to produce better results and the order of accuracy is slightly better than that of the CN scheme. However, both the schemes show around second order accuracy and good agreement with the analytical solution.

  18. Stability and non-standard finite difference method of the generalized Chua's circuit

    KAUST Repository

    Radwan, Ahmed G.


    In this paper, we develop a framework to obtain approximate numerical solutions of the fractional-order Chua\\'s circuit with Memristor using a non-standard finite difference method. Chaotic response is obtained with fractional-order elements as well as integer-order elements. Stability analysis and the condition of oscillation for the integer-order system are discussed. In addition, the stability analyses for different fractional-order cases are investigated showing a great sensitivity to small order changes indicating the poles\\' locations inside the physical s-plane. The GrnwaldLetnikov method is used to approximate the fractional derivatives. Numerical results are presented graphically and reveal that the non-standard finite difference scheme is an effective and convenient method to solve fractional-order chaotic systems, and to validate their stability. © 2011 Elsevier Ltd. All rights reserved.

  19. Finite difference numerical methods for boundary control problems governed by hyperbolic partial differential equations (United States)

    Chen, G.; Zheng, Q.; Coleman, M.; Weerakoon, S.


    This paper briefly reviews convergent finite difference schemes for hyperbolic initial boundary value problems and their applications to boundary control systems of hyperbolic type which arise in the modelling of vibrations. These difference schemes are combined with the primal and the dual approaches to compute the optimal control in the unconstrained case, as well as the case when the control is subject to inequality constraints. Some of the preliminary numerical results are also presented.

  20. Finite difference time domain (FDTD) modeling of implanted deep brain stimulation electrodes and brain tissue. (United States)

    Gabran, S R I; Saad, J H; Salama, M M A; Mansour, R R


    This paper demonstrates the electromagnetic modeling and simulation of an implanted Medtronic deep brain stimulation (DBS) electrode using finite difference time domain (FDTD). The model is developed using Empire XCcel and represents the electrode surrounded with brain tissue assuming homogenous and isotropic medium. The model is created to study the parameters influencing the electric field distribution within the tissue in order to provide reference and benchmarking data for DBS and intra-cortical electrode development.

  1. A Weighted Average Finite Difference Method for the Fractional Convection-Diffusion Equation

    Directory of Open Access Journals (Sweden)

    Lijuan Su


    Full Text Available A weighted average finite difference method for solving the two-sided space-fractional convection-diffusion equation is given, which is an extension of the weighted average method for ordinary convection-diffusion equations. Stability, consistency, and convergence of the new method are analyzed. A simple and accurate stability criterion valid for this method, arbitrary weighted factor, and arbitrary fractional derivative is given. Some numerical examples with known exact solutions are provided.

  2. A nine-point finite difference scheme for one-dimensional wave equation (United States)

    Szyszka, Barbara


    The paper is devoted to an implicit finite difference method (FDM) for solving initial-boundary value problems (IBVP) for one-dimensional wave equation. The second-order derivatives in the wave equation have been approximated at the four intermediate points, as a consequence, an implicit nine-point difference scheme has been obtained. Von Neumann stability analysis has been conducted and we have demonstrated, that the presented difference scheme is unconditionally stable.

  3. Generalized energy and potential enstrophy conserving finite difference schemes for the shallow water equations (United States)

    Abramopoulos, Frank


    The conditions under which finite difference schemes for the shallow water equations can conserve both total energy and potential enstrophy are considered. A method of deriving such schemes using operator formalism is developed. Several such schemes are derived for the A-, B- and C-grids. The derived schemes include second-order schemes and pseudo-fourth-order schemes. The simplest B-grid pseudo-fourth-order schemes are presented.

  4. Option Pricing under Risk-Minimization Criterion in an Incomplete Market with the Finite Difference Method

    Directory of Open Access Journals (Sweden)

    Xinfeng Ruan


    Full Text Available We study option pricing with risk-minimization criterion in an incomplete market where the dynamics of the risky underlying asset is governed by a jump diffusion equation with stochastic volatility. We obtain the Radon-Nikodym derivative for the minimal martingale measure and a partial integro-differential equation (PIDE of European option. The finite difference method is employed to compute the European option valuation of PIDE.

  5. Transport and dispersion of pollutants in surface impoundments: a finite difference model

    Energy Technology Data Exchange (ETDEWEB)

    Yeh, G.T.


    A surface impoundment model by finite-difference (SIMFD) has been developed. SIMFD computes the flow rate, velocity field, and the concentration distribution of pollutants in surface impoundments with any number of islands located within the region of interest. Theoretical derivations and numerical algorithm are described in detail. Instructions for the application of SIMFD and listings of the FORTRAN IV source program are provided. Two sample problems are given to illustrate the application and validity of the model.


    Directory of Open Access Journals (Sweden)

    Chaitanya Goteti


    Full Text Available Abstract Many torque carrying members have circular sections such as shafts. However, there are certain structural members like automotive chassis frames, cross members and machine frames which are often subjected to twisting loads and their cross sections are non circular. several methods were developed to analyze such sections such as Saint Venant’s semi inverse method, Prandtl’s elastic membrane analogy...etc. In this paper, the second order partial differential stress function equation for non-circular torsional members is applied on a rectangular section for different b/h (height /width of section values and the solutions for maximum torsional shear stress are found by employing second order finite difference method. The results are compared to the results obtained from commercial finite element software (ANSYS 10 and by direct solution of the stress function equation using analytical correlations available for rectangular sections. The results obtained by different approaches are in close congruence with a percentage deviation of only 3.22. It is observed that, in implementing second order finite difference scheme, the error in estimating stress is proportional to S2. Where “S” is the grid size.   Keywords: Non-Circular Section, Prandtl’s stress function, Finite difference scheme, Grid size

  7. Direct Calculation of Permeability by High-Accurate Finite Difference and Numerical Integration Methods

    KAUST Repository

    Wang, Yi


    Velocity of fluid flow in underground porous media is 6~12 orders of magnitudes lower than that in pipelines. If numerical errors are not carefully controlled in this kind of simulations, high distortion of the final results may occur [1-4]. To fit the high accuracy demands of fluid flow simulations in porous media, traditional finite difference methods and numerical integration methods are discussed and corresponding high-accurate methods are developed. When applied to the direct calculation of full-tensor permeability for underground flow, the high-accurate finite difference method is confirmed to have numerical error as low as 10-5% while the high-accurate numerical integration method has numerical error around 0%. Thus, the approach combining the high-accurate finite difference and numerical integration methods is a reliable way to efficiently determine the characteristics of general full-tensor permeability such as maximum and minimum permeability components, principal direction and anisotropic ratio. Copyright © Global-Science Press 2016.

  8. Modeling and Simulation of Hamburger Cooking Process Using Finite Difference and CFD Methods

    Directory of Open Access Journals (Sweden)

    J. Sargolzaei


    Full Text Available Unsteady-state heat transfer in hamburger cooking process was modeled using one dimensional finite difference (FD and three dimensional computational fluid dynamic (CFD models. A double-sided cooking system was designed to study the effect of pressure and oven temperature on the cooking process. Three different oven temperatures (114, 152, 204°C and three different pressures (20, 332, 570 pa were selected and 9 experiments were performed. Applying pressure to hamburger increases the contact area of hamburger with heating plate and hence the heat transfer rate to the hamburger was increased and caused the weight loss due to water evaporation and decreasing cooking time, while increasing oven temperature led to increasing weight loss and decreasing cooking time. CFD predicted results were in good agreement with the experimental results than the finite difference (FD ones. But considering the long time needed for CFD model to simulate the cooking process (about 1 hour, using the finite difference model would be more economic.

  9. Optimally Accurate Second-Order Time-Domain Finite-Difference Scheme for Acoustic, Electromagnetic, and Elastic Wave Modeling

    Directory of Open Access Journals (Sweden)

    C. Bommaraju


    Full Text Available Numerical methods are extremely useful in solving real-life problems with complex materials and geometries. However, numerical methods in the time domain suffer from artificial numerical dispersion. Standard numerical techniques which are second-order in space and time, like the conventional Finite Difference 3-point (FD3 method, Finite-Difference Time-Domain (FDTD method, and Finite Integration Technique (FIT provide estimates of the error of discretized numerical operators rather than the error of the numerical solutions computed using these operators. Here optimally accurate time-domain FD operators which are second-order in time as well as in space are derived. Optimal accuracy means the greatest attainable accuracy for a particular type of scheme, e.g., second-order FD, for some particular grid spacing. The modified operators lead to an implicit scheme. Using the first order Born approximation, this implicit scheme is transformed into a two step explicit scheme, namely predictor-corrector scheme. The stability condition (maximum time step for a given spatial grid interval for the various modified schemes is roughly equal to that for the corresponding conventional scheme. The modified FD scheme (FDM attains reduction of numerical dispersion almost by a factor of 40 in 1-D case, compared to the FD3, FDTD, and FIT. The CPU time for the FDM scheme is twice of that required by the FD3 method. The simulated synthetic data for a 2-D P-SV (elastodynamics problem computed using the modified scheme are 30 times more accurate than synthetics computed using a conventional scheme, at a cost of only 3.5 times as much CPU time. The FDM is of particular interest in the modeling of large scale (spatial dimension is more or equal to one thousand wave lengths or observation time interval is very high compared to reference time step wave propagation and scattering problems, for instance, in ultrasonic antenna and synthetic scattering data modeling for Non

  10. Serpentine: Finite Difference Methods for Wave Propagation in Second Order Formulation

    Energy Technology Data Exchange (ETDEWEB)

    Petersson, N A; Sjogreen, B


    second order system is significantly smaller. Another issue with re-writing a second order system into first order form is that compatibility conditions often must be imposed on the first order form. These (Saint-Venant) conditions ensure that the solution of the first order system also satisfies the original second order system. However, such conditions can be difficult to enforce on the discretized equations, without introducing additional modeling errors. This project has previously developed robust and memory efficient algorithms for wave propagation including effects of curved boundaries, heterogeneous isotropic, and viscoelastic materials. Partially supported by internal funding from Lawrence Livermore National Laboratory, many of these methods have been implemented in the open source software WPP, which is geared towards 3-D seismic wave propagation applications. This code has shown excellent scaling on up to 32,768 processors and has enabled seismic wave calculations with up to 26 Billion grid points. TheWPP calculations have resulted in several publications in the field of computational seismology, e.g.. All of our current methods are second order accurate in both space and time. The benefits of higher order accurate schemes for wave propagation have been known for a long time, but have mostly been developed for first order hyperbolic systems. For second order hyperbolic systems, it has not been known how to make finite difference schemes stable with free surface boundary conditions, heterogeneous material properties, and curvilinear coordinates. The importance of higher order accurate methods is not necessarily to make the numerical solution more accurate, but to reduce the computational cost for obtaining a solution within an acceptable error tolerance. This is because the accuracy in the solution can always be improved by reducing the grid size h. However, in practice, the available computational resources might not be large enough to solve the problem with a

  11. Full Wave Analysis of Passive Microwave Monolithic Integrated Circuit Devices Using a Generalized Finite Difference Time Domain (GFDTD) Algorithm (United States)

    Lansing, Faiza S.; Rascoe, Daniel L.


    This paper presents a modified Finite-Difference Time-Domain (FDTD) technique using a generalized conformed orthogonal grid. The use of the Conformed Orthogonal Grid, Finite Difference Time Domain (GFDTD) enables the designer to match all the circuit dimensions, hence eliminating a major source o error in the analysis.

  12. Wing-Body Aeroelasticity Using Finite-Difference Fluid/Finite-Element Structural Equations on Parallel Computers (United States)

    Byun, Chansup; Guruswamy, Guru P.; Kutler, Paul (Technical Monitor)


    In recent years significant advances have been made for parallel computers in both hardware and software. Now parallel computers have become viable tools in computational mechanics. Many application codes developed on conventional computers have been modified to benefit from parallel computers. Significant speedups in some areas have been achieved by parallel computations. For single-discipline use of both fluid dynamics and structural dynamics, computations have been made on wing-body configurations using parallel computers. However, only a limited amount of work has been completed in combining these two disciplines for multidisciplinary applications. The prime reason is the increased level of complication associated with a multidisciplinary approach. In this work, procedures to compute aeroelasticity on parallel computers using direct coupling of fluid and structural equations will be investigated for wing-body configurations. The parallel computer selected for computations is an Intel iPSC/860 computer which is a distributed-memory, multiple-instruction, multiple data (MIMD) computer with 128 processors. In this study, the computational efficiency issues of parallel integration of both fluid and structural equations will be investigated in detail. The fluid and structural domains will be modeled using finite-difference and finite-element approaches, respectively. Results from the parallel computer will be compared with those from the conventional computers using a single processor. This study will provide an efficient computational tool for the aeroelastic analysis of wing-body structures on MIMD type parallel computers.

  13. Parallel adaptive mesh refinement method based on WENO finite difference scheme for the simulation of multi-dimensional detonation (United States)

    Wang, Cheng; Dong, XinZhuang; Shu, Chi-Wang


    For numerical simulation of detonation, computational cost using uniform meshes is large due to the vast separation in both time and space scales. Adaptive mesh refinement (AMR) is advantageous for problems with vastly different scales. This paper aims to propose an AMR method with high order accuracy for numerical investigation of multi-dimensional detonation. A well-designed AMR method based on finite difference weighted essentially non-oscillatory (WENO) scheme, named as AMR&WENO is proposed. A new cell-based data structure is used to organize the adaptive meshes. The new data structure makes it possible for cells to communicate with each other quickly and easily. In order to develop an AMR method with high order accuracy, high order prolongations in both space and time are utilized in the data prolongation procedure. Based on the message passing interface (MPI) platform, we have developed a workload balancing parallel AMR&WENO code using the Hilbert space-filling curve algorithm. Our numerical experiments with detonation simulations indicate that the AMR&WENO is accurate and has a high resolution. Moreover, we evaluate and compare the performance of the uniform mesh WENO scheme and the parallel AMR&WENO method. The comparison results provide us further insight into the high performance of the parallel AMR&WENO method.

  14. A multithreaded and GPU-optimized compact finite difference algorithm for turbulent mixing at high Schmidt number using petascale computing (United States)

    Clay, M. P.; Yeung, P. K.; Buaria, D.; Gotoh, T.


    Turbulent mixing at high Schmidt number is a multiscale problem which places demanding requirements on direct numerical simulations to resolve fluctuations down the to Batchelor scale. We use a dual-grid, dual-scheme and dual-communicator approach where velocity and scalar fields are computed by separate groups of parallel processes, the latter using a combined compact finite difference (CCD) scheme on finer grid with a static 3-D domain decomposition free of the communication overhead of memory transposes. A high degree of scalability is achieved for a 81923 scalar field at Schmidt number 512 in turbulence with a modest inertial range, by overlapping communication with computation whenever possible. On the Cray XE6 partition of Blue Waters, use of a dedicated thread for communication combined with OpenMP locks and nested parallelism reduces CCD timings by 34% compared to an MPI baseline. The code has been further optimized for the 27-petaflops Cray XK7 machine Titan using GPUs as accelerators with the latest OpenMP 4.5 directives, giving 2.7X speedup compared to CPU-only execution at the largest problem size. Supported by NSF Grant ACI-1036170, the NCSA Blue Waters Project with subaward via UIUC, and a DOE INCITE allocation at ORNL.

  15. A study of unstable rock failures using finite difference and discrete element methods (United States)

    Garvey, Ryan J.

    Case histories in mining have long described pillars or faces of rock failing violently with an accompanying rapid ejection of debris and broken material into the working areas of the mine. These unstable failures have resulted in large losses of life and collapses of entire mine panels. Modern mining operations take significant steps to reduce the likelihood of unstable failure, however eliminating their occurrence is difficult in practice. Researchers over several decades have supplemented studies of unstable failures through the application of various numerical methods. The direction of the current research is to extend these methods and to develop improved numerical tools with which to study unstable failures in underground mining layouts. An extensive study is first conducted on the expression of unstable failure in discrete element and finite difference methods. Simulated uniaxial compressive strength tests are run on brittle rock specimens. Stable or unstable loading conditions are applied onto the brittle specimens by a pair of elastic platens with ranging stiffnesses. Determinations of instability are established through stress and strain histories taken for the specimen and the system. Additional numerical tools are then developed for the finite difference method to analyze unstable failure in larger mine models. Instability identifiers are established for assessing the locations and relative magnitudes of unstable failure through measures of rapid dynamic motion. An energy balance is developed which calculates the excess energy released as a result of unstable equilibria in rock systems. These tools are validated through uniaxial and triaxial compressive strength tests and are extended to models of coal pillars and a simplified mining layout. The results of the finite difference simulations reveal that the instability identifiers and excess energy calculations provide a generalized methodology for assessing unstable failures within potentially complex

  16. Simulation of acoustic streaming by means of the finite-difference time-domain method

    DEFF Research Database (Denmark)

    Santillan, Arturo Orozco


    Numerical simulations of acoustic streaming generated by a standing wave in a narrow twodimensional cavity are presented. In this case, acoustic streaming arises from the viscous boundary layers set up at the surfaces of the walls. It is known that streaming vortices inside the boundary layer have...... the finite-difference time-domain method. To simplify the problem, thermal effects are not considered. The motivation of the described investigation has been the possibility of using the numerical method to study acoustic streaming, particularly under non-steady conditions. Results are discussed for channels...

  17. On the convergence of certain finite-difference schemes by an inverse-matrix method (United States)

    Steger, J. L.; Warming, R. F.


    The inverse-matrix method of analyzing the convergence of the solution of a given system of finite-difference equations to the solution of the corresponding system of partial-differential equations is discussed and generalized. The convergence properties of a time- and space-centered differencing of the diffusion equation are analyzed as well as a staggered grid differencing of the Cauchy-Riemann equations. These two schemes are significant since they serve as simplified model algorithms for two recently developed methods used to calculate nonlinear aerodynamic flows.

  18. A fast finite-difference algorithm for topology optimization of permanent magnets (United States)

    Abert, Claas; Huber, Christian; Bruckner, Florian; Vogler, Christoph; Wautischer, Gregor; Suess, Dieter


    We present a finite-difference method for the topology optimization of permanent magnets that is based on the fast-Fourier-transform (FFT) accelerated computation of the stray-field. The presented method employs the density approach for topology optimization and uses an adjoint method for the gradient computation. Comparison to various state-of-the-art finite-element implementations shows a superior performance and accuracy. Moreover, the presented method is very flexible and easy to implement due to various preexisting FFT stray-field implementations that can be used.

  19. Finite Difference Time-Domain Modelling of Metamaterials: GPU Implementation of Cylindrical Cloak

    Directory of Open Access Journals (Sweden)

    A. Dawood


    Full Text Available Finite difference time-domain (FDTD technique can be used to model metamaterials by treating them as dispersive material. Drude or Lorentz model can be incorporated into the standard FDTD algorithm for modelling negative permittivity and permeability. FDTD algorithm is readily parallelisable and can take advantage of GPU acceleration to achieve speed-ups of 5x-50x depending on hardware setup. Metamaterial scattering problems are implemented using dispersive FDTD technique on GPU resulting in performance gain of 10x-15x compared to conventional CPU implementation.

  20. Arbitrary Order Mixed Mimetic Finite Differences Method with Nodal Degrees of Freedom

    Energy Technology Data Exchange (ETDEWEB)

    Iaroshenko, Oleksandr [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Gyrya, Vitaliy [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Manzini, Gianmarco [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    In this work we consider a modification to an arbitrary order mixed mimetic finite difference method (MFD) for a diffusion equation on general polygonal meshes [1]. The modification is based on moving some degrees of freedom (DoF) for a flux variable from edges to vertices. We showed that for a non-degenerate element this transformation is locally equivalent, i.e. there is a one-to-one map between the new and the old DoF. Globally, on the other hand, this transformation leads to a reduction of the total number of degrees of freedom (by up to 40%) and additional continuity of the discrete flux.

  1. Calculating modes of quantum wire systems using a finite difference technique

    Directory of Open Access Journals (Sweden)

    T Mardani


    Full Text Available  In this paper, the Schrodinger equation for a quantum wire is solved using a finite difference approach. A new aspect in this work is plotting wave function on cross section of rectangular cross-sectional wire in two dimensions, periodically. It is found that the correct eigen energies occur when wave functions have a complete symmetry. If the value of eigen energy has a small increase or decrease in neighborhood of the correct energy the symmetry will be destroyed and aperturbation value at the first of wave function will be observed. In addition, the demand on computer memory varies linearly with the size of the system under investigation.

  2. Varieties of operator manipulation. [for solving differential equations and calculating finite differences (United States)

    Doohovskoy, A.


    A change in MACSYMA syntax is proposed to accommodate the operator manipulators necessary to implement direct and indirect methods for the solution of differential equations, calculus of finite differences, and the fractional calculus, as well as their modern counterparts. To illustrate the benefits and convenience of this syntax extension, an example is given to show how MACSYMA's pattern-matching capability can be used to implement a particular set of operator identities which can then be used to obtain exact solutions to nonlinear differential equations.

  3. Finite-difference solution for turbulent swirling compressible flow in axisymmetric ducts with struts (United States)

    Anderson, O. L.


    A finite-difference procedure for computing the turbulent, swirling, compressible flow in axisymmetric ducts is described. Arbitrary distributions of heat and mass transfer at the boundaries can be treated, and the effects of struts, inlet guide vanes, and flow straightening vanes can be calculated. The calculation procedure is programmed in FORTRAN 4 and has operated successfully on the UNIVAC 1108, IBM 360, and CDC 6600 computers. The analysis which forms the basis of the procedure, a detailed description of the computer program, and the input/output formats are presented. The results of sample calculations performed with the computer program are compared with experimental data.

  4. Scattering analysis of periodic structures using finite-difference time-domain

    CERN Document Server

    ElMahgoub, Khaled; Elsherbeni, Atef Z


    Periodic structures are of great importance in electromagnetics due to their wide range of applications such as frequency selective surfaces (FSS), electromagnetic band gap (EBG) structures, periodic absorbers, meta-materials, and many others. The aim of this book is to develop efficient computational algorithms to analyze the scattering properties of various electromagnetic periodic structures using the finite-difference time-domain periodic boundary condition (FDTD/PBC) method. A new FDTD/PBC-based algorithm is introduced to analyze general skewed grid periodic structures while another algor

  5. Finite-difference time domain solution of light scattering by arbitrarily shaped particles and surfaces

    DEFF Research Database (Denmark)

    Tanev, Stoyan; Sun, Wenbo


    This chapter reviews the fundamental methods and some of the applications of the three-dimensional (3D) finite-difference time-domain (FDTD) technique for the modeling of light scattering by arbitrarily shaped dielectric particles and surfaces. The emphasis is on the details of the FDTD algorithms...... for particle and surface scattering calculations and the uniaxial perfectly matched layer (UPML) absorbing boundary conditions for truncation of the FDTD grid. We show that the FDTD approach has a significant potential for studying the light scattering by cloud, dust, and biological particles. The applications...... of the FDTD approach for beam scattering by arbitrarily shaped surfaces are also discussed....

  6. A note on the stability and accuracy of finite difference approximations to differential equations

    Energy Technology Data Exchange (ETDEWEB)

    Cloutman, L.D.


    There are many finite difference approximations to ordinary and partial differential equations, and these vary in their accuracy and stability properties. We examine selected commonly used methods and illustrate their stability and accuracy using both linear stability analysis and numerical examples. We find that the formal order of accuracy alone gives an incomplete picture of the accuracy of the method. Specifically, the Adams-Bashforth and Crank-Nicholson methods are shown to have some undesirable features for both ordinary and partial differential equations.

  7. Composite scheme using localized relaxation with non-standard finite difference method for hyperbolic conservation laws (United States)

    Kumar, Vivek; Raghurama Rao, S. V.


    Non-standard finite difference methods (NSFDM) introduced by Mickens [ Non-standard Finite Difference Models of Differential Equations, World Scientific, Singapore, 1994] are interesting alternatives to the traditional finite difference and finite volume methods. When applied to linear hyperbolic conservation laws, these methods reproduce exact solutions. In this paper, the NSFDM is first extended to hyperbolic systems of conservation laws, by a novel utilization of the decoupled equations using characteristic variables. In the second part of this paper, the NSFDM is studied for its efficacy in application to nonlinear scalar hyperbolic conservation laws. The original NSFDMs introduced by Mickens (1994) were not in conservation form, which is an important feature in capturing discontinuities at the right locations. Mickens [Construction and analysis of a non-standard finite difference scheme for the Burgers-Fisher equations, Journal of Sound and Vibration 257 (4) (2002) 791-797] recently introduced a NSFDM in conservative form. This method captures the shock waves exactly, without any numerical dissipation. In this paper, this algorithm is tested for the case of expansion waves with sonic points and is found to generate unphysical expansion shocks. As a remedy to this defect, we use the strategy of composite schemes [R. Liska, B. Wendroff, Composite schemes for conservation laws, SIAM Journal of Numerical Analysis 35 (6) (1998) 2250-2271] in which the accurate NSFDM is used as the basic scheme and localized relaxation NSFDM is used as the supporting scheme which acts like a filter. Relaxation schemes introduced by Jin and Xin [The relaxation schemes for systems of conservation laws in arbitrary space dimensions, Communications in Pure and Applied Mathematics 48 (1995) 235-276] are based on relaxation systems which replace the nonlinear hyperbolic conservation laws by a semi-linear system with a stiff relaxation term. The relaxation parameter ( λ) is chosen locally

  8. Accuracy of spectral and finite difference schemes in 2D advection problems

    DEFF Research Database (Denmark)

    Naulin, V.; Nielsen, A.H.


    In this paper we investigate the accuracy of two numerical procedures commonly used to solve 2D advection problems: spectral and finite difference (FD) schemes. These schemes are widely used, simulating, e.g., neutral and plasma flows. FD schemes have long been considered fast, relatively easy...... that the accuracy of FD schemes can be significantly improved if one is careful in choosing an appropriate FD scheme that reflects conservation properties of the nonlinear terms and in setting up the grid in accordance with the problem....

  9. Neurite, a finite difference large scale parallel program for the simulation of electrical signal propagation in neurites under mechanical loading.

    Directory of Open Access Journals (Sweden)

    Julián A García-Grajales

    Full Text Available With the growing body of research on traumatic brain injury and spinal cord injury, computational neuroscience has recently focused its modeling efforts on neuronal functional deficits following mechanical loading. However, in most of these efforts, cell damage is generally only characterized by purely mechanistic criteria, functions of quantities such as stress, strain or their corresponding rates. The modeling of functional deficits in neurites as a consequence of macroscopic mechanical insults has been rarely explored. In particular, a quantitative mechanically based model of electrophysiological impairment in neuronal cells, Neurite, has only very recently been proposed. In this paper, we present the implementation details of this model: a finite difference parallel program for simulating electrical signal propagation along neurites under mechanical loading. Following the application of a macroscopic strain at a given strain rate produced by a mechanical insult, Neurite is able to simulate the resulting neuronal electrical signal propagation, and thus the corresponding functional deficits. The simulation of the coupled mechanical and electrophysiological behaviors requires computational expensive calculations that increase in complexity as the network of the simulated cells grows. The solvers implemented in Neurite--explicit and implicit--were therefore parallelized using graphics processing units in order to reduce the burden of the simulation costs of large scale scenarios. Cable Theory and Hodgkin-Huxley models were implemented to account for the electrophysiological passive and active regions of a neurite, respectively, whereas a coupled mechanical model accounting for the neurite mechanical behavior within its surrounding medium was adopted as a link between electrophysiology and mechanics. This paper provides the details of the parallel implementation of Neurite, along with three different application examples: a long myelinated axon

  10. Comparison of finite-difference schemes for analysis of shells of revolution. [stress and free vibration analysis (United States)

    Noor, A. K.; Stephens, W. B.


    Several finite difference schemes are applied to the stress and free vibration analysis of homogeneous isotropic and layered orthotropic shells of revolution. The study is based on a form of the Sanders-Budiansky first-approximation linear shell theory modified such that the effects of shear deformation and rotary inertia are included. A Fourier approach is used in which all the shell stress resultants and displacements are expanded in a Fourier series in the circumferential direction, and the governing equations reduce to ordinary differential equations in the meridional direction. While primary attention is given to finite difference schemes used in conjunction with first order differential equation formulation, comparison is made with finite difference schemes used with other formulations. These finite difference discretization models are compared with respect to simplicity of application, convergence characteristics, and computational efficiency. Numerical studies are presented for the effects of variations in shell geometry and lamination parameters on the accuracy and convergence of the solutions obtained by the different finite difference schemes. On the basis of the present study it is shown that the mixed finite difference scheme based on the first order differential equation formulation and two interlacing grids for the different fundamental unknowns combines a number of advantages over other finite difference schemes previously reported in the literature.

  11. Study on optimized upwind schemes for computational areoacoustics and extension of a fully conservative Chimera to finite difference schemes (United States)

    Chen, Rangfu

    A computational methodology has been developed in the first part of the thesis for the simulations of acoustic radiation, propagation and reflection. The developed methodology is high order accurate, uses less grid points per wave length comparing to standard high order accurate numerical methods, and automatically damps out spurious short waves. Furthermore, the methodology can be applied to acoustic problems in the presence of objects with curved geometries. To achieve these results, high order accurate optimized upwind schemes, which are applied to discretize spatial derivatives on interior grid points, have been developed. High order accurate optimized one- side biased schemes, which are only applied to discretize the spatial derivatives on grid points near computational boundaries, have also been constructed. The developed schemes are combined with a time difference scheme to fully discretize acoustic field equations in multi- dimension in arbitrary curvilinear coordinates. Numerical boundary conditions are investigated and intuitively illustrated. Applications of the developed methodology to a sequence of one-dimensional and multi-dimensional acoustic problems are performed. The numerical results have validated the developed methodology and demonstrated advantages of the methodology over central-difference Dispersion-Relation-Preserving method. Numerical results have also shown that the optimized upwind schemes minimize not only the dissipation error but also the dissipation error, while retaining the numerical stability. The second part of the thesis deals with a fully conservative Chimera methodology. The fully conservative Chimera was originally developed based on a finite volume approach. A finite difference scheme is shown to be identical to a finite volume scheme with proper definition of control volumes and metrics. The fully conservative Chimera has been successfully extended to finite difference schemes for viscous flows including turbulence models

  12. Implementation and testing of stable, fast implicit solvation in molecular dynamics using the smooth-permittivity finite difference Poisson-Boltzmann method. (United States)

    Prabhu, Ninad V; Zhu, Peijuan; Sharp, Kim A


    A fast stable finite difference Poisson-Boltzmann (FDPB) model for implicit solvation in molecular dynamics simulations was developed using the smooth permittivity FDPB method implemented in the OpenEye ZAP libraries. This was interfaced with two widely used molecular dynamics packages, AMBER and CHARMM. Using the CHARMM-ZAP software combination, the implicit solvent model was tested on eight proteins differing in size, structure, and cofactors: calmodulin, horseradish peroxidase (with and without substrate analogue bound), lipid carrier protein, flavodoxin, ubiquitin, cytochrome c, and a de novo designed 3-helix bundle. The stability and accuracy of the implicit solvent simulations was assessed by examining root-mean-squared deviations from crystal structure. This measure was compared with that of a standard explicit water solvent model. In addition we compared experimental and calculated NMR order parameters to obtain a residue level assessment of the accuracy of MD-ZAP for simulating dynamic quantities. Overall, the agreement of the implicit solvent model with experiment was as good as that of explicit water simulations. The implicit solvent method was up to eight times faster than the explicit water simulations, and approximately four times slower than a vacuum simulation (i.e., with no solvent treatment). (c) 2004 Wiley Periodicals, Inc.

  13. High-order asynchrony-tolerant finite difference schemes for partial differential equations (United States)

    Aditya, Konduri; Donzis, Diego A.


    Synchronizations of processing elements (PEs) in massively parallel simulations, which arise due to communication or load imbalances between PEs, significantly affect the scalability of scientific applications. We have recently proposed a method based on finite-difference schemes to solve partial differential equations in an asynchronous fashion - synchronization between PEs is relaxed at a mathematical level. While standard schemes can maintain their stability in the presence of asynchrony, their accuracy is drastically affected. In this work, we present a general methodology to derive asynchrony-tolerant (AT) finite difference schemes of arbitrary order of accuracy, which can maintain their accuracy when synchronizations are relaxed. We show that there are several choices available in selecting a stencil to derive these schemes and discuss their effect on numerical and computational performance. We provide a simple classification of schemes based on the stencil and derive schemes that are representative of different classes. Their numerical error is rigorously analyzed within a statistical framework to obtain the overall accuracy of the solution. Results from numerical experiments are used to validate the performance of the schemes.

  14. A parameter-robust finite difference method for singularly perturbed delay parabolic partial differential equations (United States)

    Ansari, A. R.; Bakr, S. A.; Shishkin, G. I.


    A Dirichlet boundary value problem for a delay parabolic differential equation is studied on a rectangular domain in the x-t plane. The second-order space derivative is multiplied by a small singular perturbation parameter, which gives rise to parabolic boundary layers on the two lateral sides of the rectangle. A numerical method comprising a standard finite difference operator (centred in space, implicit in time) on a rectangular piecewise uniform fitted mesh of NxxNt elements condensing in the boundary layers is proved to be robust with respect to the small parameter, or parameter-uniform, in the sense that its numerical solutions converge in the maximum norm to the exact solution uniformly well for all values of the parameter in the half-open interval (0,1]. More specifically, it is shown that the errors are bounded in the maximum norm by , where C is a constant independent not only of Nx and Nt but also of the small parameter. Numerical results are presented, which validate numerically this theoretical result and show that a numerical method consisting of the standard finite difference operator on a uniform mesh of NxxNt elements is not parameter-robust.

  15. A finite difference method for space fractional differential equations with variable diffusivity coefficient

    KAUST Repository

    Mustapha, K.


    Anomalous diffusion is a phenomenon that cannot be modeled accurately by second-order diffusion equations, but is better described by fractional diffusion models. The nonlocal nature of the fractional diffusion operators makes substantially more difficult the mathematical analysis of these models and the establishment of suitable numerical schemes. This paper proposes and analyzes the first finite difference method for solving {\\\\em variable-coefficient} fractional differential equations, with two-sided fractional derivatives, in one-dimensional space. The proposed scheme combines first-order forward and backward Euler methods for approximating the left-sided fractional derivative when the right-sided fractional derivative is approximated by two consecutive applications of the first-order backward Euler method. Our finite difference scheme reduces to the standard second-order central difference scheme in the absence of fractional derivatives. The existence and uniqueness of the solution for the proposed scheme are proved, and truncation errors of order $h$ are demonstrated, where $h$ denotes the maximum space step size. The numerical tests illustrate the global $O(h)$ accuracy of our scheme, except for nonsmooth cases which, as expected, have deteriorated convergence rates.

  16. Physical and numerical constraints in source modeling for finite difference simulation of room acoustics. (United States)

    Sheaffer, Jonathan; van Walstijn, Maarten; Fazenda, Bruno


    In finite difference time domain simulation of room acoustics, source functions are subject to various constraints. These depend on the way sources are injected into the grid and on the chosen parameters of the numerical scheme being used. This paper addresses the issue of selecting and designing sources for finite difference simulation, by first reviewing associated aims and constraints, and evaluating existing source models against these criteria. The process of exciting a model is generalized by introducing a system of three cascaded filters, respectively, characterizing the driving pulse, the source mechanics, and the injection of the resulting source function into the grid. It is shown that hard, soft, and transparent sources can be seen as special cases within this unified approach. Starting from the mechanics of a small pulsating sphere, a parametric source model is formulated by specifying suitable filters. This physically constrained source model is numerically consistent, does not scatter incoming waves, and is free from zero- and low-frequency artifacts. Simulation results are employed for comparison with existing source formulations in terms of meeting the spectral and temporal requirements on the outward propagating wave.

  17. A fast referenceless PRFS-based MR thermometry by phase finite difference (United States)

    Zou, Chao; Shen, Huan; He, Mengyue; Tie, Changjun; Chung, Yiu-Cho; Liu, Xin


    Proton resonance frequency shift-based MR thermometry is a promising temperature monitoring approach for thermotherapy but its accuracy is vulnerable to inter-scan motion. Model-based referenceless thermometry has been proposed to address this problem but phase unwrapping is usually needed before the model fitting process. In this paper, a referenceless MR thermometry method using phase finite difference that avoids the time consuming phase unwrapping procedure is proposed. Unlike the previously proposed phase gradient technique, the use of finite difference in the new method reduces the fitting error resulting from the ringing artifacts associated with phase discontinuity in the calculation of the phase gradient image. The new method takes into account the values at the perimeter of the region of interest because of their direct relevance to the extrapolated baseline phase of the region of interest (where temperature increase takes place). In simulation study, in vivo and ex vivo experiments, the new method has a root-mean-square temperature error of 0.35 °C, 1.02 °C and 1.73 °C compared to 0.83 °C, 2.81 °C, and 3.76 °C from the phase gradient method, respectively. The method also demonstrated a slightly higher, albeit small, temperature accuracy than the original referenceless MR thermometry method. The proposed method is computationally efficient (∼0.1 s per image), making it very suitable for the real time temperature monitoring.

  18. On the Definition of Surface Potentials for Finite-Difference Operators (United States)

    Tsynkov, S. V.; Bushnell, Dennis M. (Technical Monitor)


    For a class of linear constant-coefficient finite-difference operators of the second order, we introduce the concepts similar to those of conventional single- and double-layer potentials for differential operators. The discrete potentials are defined completely independently of any notion related to the approximation of the continuous potentials on the grid. We rather use all approach based on differentiating, and then inverting the differentiation of a function with surface discontinuity of a particular kind, which is the most general way of introducing surface potentials in the theory of distributions. The resulting finite-difference "surface" potentials appear to be solutions of the corresponding continuous potentials. Primarily, this pertains to the possibility of representing a given solution to the homogeneous equation on the domain as a variety of surface potentials, with the density defined on the domain's boundary. At the same time the discrete surface potentials can be interpreted as one specific realization of the generalized potentials of Calderon's type, and consequently, their approximation properties can be studied independently in the framework of the difference potentials method by Ryaben'kii. The motivation for introducing and analyzing the discrete surface potentials was provided by the problems of active shielding and control of sound, in which the aforementioned source terms that drive the potentials are interpreted as the acoustic control sources that cancel out the unwanted noise on a predetermined region of interest.

  19. Polarization effects on spectra of spherical core/shell nanostructures: Perturbation theory against finite difference approach

    Energy Technology Data Exchange (ETDEWEB)

    Ibral, Asmaa [Equipe d' Optique et Electronique du Solide, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida principale, El Jadida, Royaume du Maroc (Morocco); Laboratoire d' Instrumentation, Mesure et Contrôle, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida principale, El Jadida, Royaume du Maroc (Morocco); Zouitine, Asmaa [Département de Physique, Ecole Nationale Supérieure d' Enseignement Technique, Université Mohammed V Souissi, B. P. 6207 Rabat-Instituts, Rabat, Royaume du Maroc (Morocco); Assaid, El Mahdi, E-mail: [Equipe d' Optique et Electronique du Solide, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida principale, El Jadida, Royaume du Maroc (Morocco); Laboratoire d' Instrumentation, Mesure et Contrôle, Département de Physique, Faculté des Sciences, Université Chouaïb Doukkali, B. P. 20 El Jadida principale, El Jadida, Royaume du Maroc (Morocco); and others


    Poisson equation is solved analytically in the case of a point charge placed anywhere in a spherical core/shell nanostructure, immersed in aqueous or organic solution or embedded in semiconducting or insulating matrix. Conduction and valence band-edge alignments between core and shell are described by finite height barriers. Influence of polarization charges induced at the surfaces where two adjacent materials meet is taken into account. Original expressions of electrostatic potential created everywhere in the space by a source point charge are derived. Expressions of self-polarization potential describing the interaction of a point charge with its own image–charge are deduced. Contributions of double dielectric constant mismatch to electron and hole ground state energies as well as nanostructure effective gap are calculated via first order perturbation theory and also by finite difference approach. Dependencies of electron, hole and gap energies against core to shell radii ratio are determined in the case of ZnS/CdSe core/shell nanostructure immersed in water or in toluene. It appears that finite difference approach is more efficient than first order perturbation method and that the effect of polarization charge may in no case be neglected as its contribution can reach a significant proportion of the value of nanostructure gap.

  20. A Cell-Based Finite Difference Method for the Numerical Solution of PDEs (United States)

    Salih, A.; Barron, R. M.; Friedl, J.


    The governing partial differential equations of fluid motion are usually numerically approximated using one of three methods: Finite Difference (FD), Finite Volume (FV) or Finite Element (FE). Finding practical solutions to the governing equations of fluid mechanics is one of the most challenging problems in engineering because these equations, in most cases, form a set of coupled non-linear partial differential equations. In this research, a new cell-centred Finite Difference (CCFD) formulation is developed that is applied in each individual cell of an arbitrary mesh discretizing the solution domain. This feature allows the application of the proposed FD numerical formulation on arbitrary mesh topologies, i.e., structured, unstructured or hybrid meshes. Initially, a simple test case is investigated to illustrate this method. The numerical results are compared with the analytical solution and/or a traditional FD solution. Lastly, two additional test cases are conducted to illustrate the ability of the CCFD method to handle mixed boundary types and its extendibility to other types of elliptic boundary value problems.

  1. A mimetic finite difference method for the Stokes problem with elected edge bubbles

    Energy Technology Data Exchange (ETDEWEB)

    Lipnikov, K [Los Alamos National Laboratory; Berirao, L [DIPARTMENTO DI MATERMATICA


    A new mimetic finite difference method for the Stokes problem is proposed and analyzed. The unstable P{sub 1}-P{sub 0} discretization is stabilized by adding a small number of bubble functions to selected mesh edges. A simple strategy for selecting such edges is proposed and verified with numerical experiments. The discretizations schemes for Stokes and Navier-Stokes equations must satisfy the celebrated inf-sup (or the LBB) stability condition. The stability condition implies a balance between discrete spaces for velocity and pressure. In finite elements, this balance is frequently achieved by adding bubble functions to the velocity space. The goal of this article is to show that the stabilizing edge bubble functions can be added only to a small set of mesh edges. This results in a smaller algebraic system and potentially in a faster calculations. We employ the mimetic finite difference (MFD) discretization technique that works for general polyhedral meshes and can accomodate non-uniform distribution of stabilizing bubbles.

  2. Modified Finite Difference Schemes on Uniform Grids for Simulations of the Helmholtz Equation at Any Wave Number

    Directory of Open Access Journals (Sweden)

    Hafiz Abdul Wajid


    Full Text Available We construct modified forward, backward, and central finite difference schemes, specifically for the Helmholtz equation, by using the Bloch wave property. All of these modified finite difference approximations provide exact solutions at the nodes of the uniform grid for the second derivative present in the Helmholtz equation and the first derivative in the radiation boundary conditions for wave propagation. The most important feature of the modified schemes is that they work for large as well as low wave numbers, without the common requirement of a very fine mesh size. The superiority of the modified finite difference schemes is illustrated with the help of numerical examples by making a comparison with standard finite difference schemes.

  3. Finite-Difference Algorithm for Simulating 3D Electromagnetic Wavefields in Conductive Media (United States)

    Aldridge, D. F.; Bartel, L. C.; Knox, H. A.


    Electromagnetic (EM) wavefields are routinely used in geophysical exploration for detection and characterization of subsurface geological formations of economic interest. Recorded EM signals depend strongly on the current conductivity of geologic media. Hence, they are particularly useful for inferring fluid content of saturated porous bodies. In order to enhance understanding of field-recorded data, we are developing a numerical algorithm for simulating three-dimensional (3D) EM wave propagation and diffusion in heterogeneous conductive materials. Maxwell's equations are combined with isotropic constitutive relations to obtain a set of six, coupled, first-order partial differential equations governing the electric and magnetic vectors. An advantage of this system is that it does not contain spatial derivatives of the three medium parameters electric permittivity, magnetic permeability, and current conductivity. Numerical solution methodology consists of explicit, time-domain finite-differencing on a 3D staggered rectangular grid. Temporal and spatial FD operators have order 2 and N, where N is user-selectable. We use an artificially-large electric permittivity to maximize the FD timestep, and thus reduce execution time. For the low frequencies typically used in geophysical exploration, accuracy is not unduly compromised. Grid boundary reflections are mitigated via convolutional perfectly matched layers (C-PMLs) imposed at the six grid flanks. A shared-memory-parallel code implementation via OpenMP directives enables rapid algorithm execution on a multi-thread computational platform. Good agreement is obtained in comparisons of numerically-generated data with reference solutions. EM wavefields are sourced via point current density and magnetic dipole vectors. Spatially-extended inductive sources (current carrying wire loops) are under development. We are particularly interested in accurate representation of high-conductivity sub-grid-scale features that are common

  4. Application of a trigonometric finite difference procedure to numerical analysis of compressive and shear buckling of orthotropic panels (United States)

    Stein, M.; Housner, J. D.


    A numerical analysis developed for the buckling of rectangular orthotropic layered panels under combined shear and compression is described. This analysis uses a central finite difference procedure based on trigonometric functions instead of using the conventional finite differences which are based on polynomial functions. Inasmuch as the buckle mode shape is usually trigonometric in nature, the analysis using trigonometric finite differences can be made to exhibit a much faster convergence rate than that using conventional differences. Also, the trigonometric finite difference procedure leads to difference equations having the same form as conventional finite differences; thereby allowing available conventional finite difference formulations to be converted readily to trigonometric form. For two-dimensional problems, the procedure introduces two numerical parameters into the analysis. Engineering approaches for the selection of these parameters are presented and the analysis procedure is demonstrated by application to several isotropic and orthotropic panel buckling problems. Among these problems is the shear buckling of stiffened isotropic and filamentary composite panels in which the stiffener is broken. Results indicate that a break may degrade the effect of the stiffener to the extent that the panel will not carry much more load than if the stiffener were absent.

  5. Linear and nonlinear Stability analysis for finite difference discretizations of higher order Boussinesq equations

    DEFF Research Database (Denmark)

    Fuhrmann, David R.; Bingham, Harry B.; Madsen, Per A.


    This paper considers a method of lines stability analysis for finite difference discretizations of a recently published Boussinesq method for the study of highly nonlinear and extremely dispersive water waves. The analysis demonstrates the near-equivalence of classical linear Fourier (von Neumann......) techniques with matrix-based methods for formulations in both one and two horizontal dimensions. The matrix-based method is also extended to show the local de-stabilizing effects of the nonlinear terms, as well as the stabilizing effects of numerical dissipation. A comparison of the relative stability...... of rotational and irrotational formulations in two horizontal dimensions provides evidence that the irrotational formulation has significantly better stability properties when the deep-water nonlinearity is high, particularly on refined grids. Computation of matrix pseudospectra shows that the system is only...

  6. On the computational noise of finite-difference schemes used in ocean models (United States)

    Batteen, M. L.; Han, Y.-J.


    Different distributions of variables over the horizontal array of grid points in an ocean circulation model are investigated, using the shallow water equations as a guide in the choice of finite-difference schemes for use in ocean modeling. It is shown that the scheme with diffusive dissipation, in which the horizontal velocity is carried at the center and the height field is carried at each corner of a rectangular grid, successively suppresses numerical noise in a coarse (greater than 100 km) grid ocean model. For resolutions smaller than 50 km, it is shown that the scheme in which zonal velocity is carried at points to the east and west of the point of a rectangular grid where the height is carried, with meridional velocity carried to the north and south of the height point, can be free of noise for the gravest mode.

  7. Full-wave finite-difference time-domain simulation of electromagnetic cloaking structures. (United States)

    Zhao, Yan; Argyropoulos, Christos; Hao, Yang


    This paper proposes a radial dependent dispersive finite-difference time-domain method for the modeling of electromagnetic cloaking structures. The permittivity and permeability of the cloak are mapped to the Drude dispersion model and taken into account in dispersive FDTD simulations. Numerical simulations demonstrate that under ideal conditions, objects placed inside the cloak are 'invisible' to external electromagnetic fields. However for the simplified cloak based on linear transformations, the back scattering has a similar level to the case of a PEC cylinder without any cloak, rendering the object still being 'visible'. It is also demonstrated numerically that the simplified cloak based on high-order transformations can indeed improve the cloaking performance.

  8. Solution of the Porous Media Equation by a Compact Finite Difference Method

    Directory of Open Access Journals (Sweden)

    Murat Sari


    Full Text Available Accurate solutions of the porous media equation that usually occurs in nonlinear problems of heat and mass transfer and in biological systems are obtained using a compact finite difference method in space and a low-storage total variation diminishing third-order Runge-Kutta scheme in time. In the calculation of the numerical derivatives, only a tridiagonal band matrix algorithm is encountered. Therefore, this scheme causes to less accumulation of numerical errors and less use of storage space. The computed results obtained by this way have been compared with the exact solutions to show the accuracy of the method. The approximate solutions to the equation have been computed without transforming the equation and without using linearization. Comparisons indicate that there is a very good agreement between the numerical solutions and the exact solutions in terms of accuracy. This method is seen to be a very good alternative method to some existing techniques for such realistic problems.

  9. Black-Scholes finite difference modeling in forecasting of call warrant prices in Bursa Malaysia (United States)

    Mansor, Nur Jariah; Jaffar, Maheran Mohd


    Call warrant is a type of structured warrant in Bursa Malaysia. It gives the holder the right to buy the underlying share at a specified price within a limited period of time. The issuer of the structured warrants usually uses European style to exercise the call warrant on the maturity date. Warrant is very similar to an option. Usually, practitioners of the financial field use Black-Scholes model to value the option. The Black-Scholes equation is hard to solve analytically. Therefore the finite difference approach is applied to approximate the value of the call warrant prices. The central in time and central in space scheme is produced to approximate the value of the call warrant prices. It allows the warrant holder to forecast the value of the call warrant prices before the expiry date.

  10. Dispersive finite-difference time-domain (FDTD) analysis of the elliptic cylindrical cloak

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Y. Y.; Ahn, D. [University of Seoul, Seoul (Korea, Republic of)


    A dispersive full-wave finite-difference time-domain (FDTD) model is used to calculate the performance of elliptic cylindrical cloaking devices. The permittivity and the permeability tensors for the cloaking structure are derived by using an effective medium approach in general relativity. The elliptic cylindrical invisibility devices are found to show imperfect cloaking, and the cloaking performance is found to depend on the polarization of the incident waves, the direction of the propagation of those waves, the semi-focal distances and the loss tangents of the meta-material. When the semifocal distance of the elliptic cylinder decreases, the performance of the cloaking becomes very good, with neither noticeable scatterings nor field penetrations. For a larger semi-focal distance, only the TM wave with a specific propagation direction shows good cloaking performance. Realistic cloaking materials with loss still show a cloak that is working, but attenuated back-scattering waves exist.

  11. A two-dimensional finite difference solution for the transient thermal behavior of tubular solar collector (United States)

    Lansing, F. L.


    A numerical procedure was established using the finite-difference technique in the determination of the time-varying temperature distribution of a tubular solar collector under changing solar radiancy and ambient temperature. Three types of spatial discretization processes were considered and compared for their accuracy of computations and for selection of the shortest computer time and cost. The stability criteria of this technique was analyzed in detail to give the critical time increment to ensure stable computations. The results of the numerical analysis were in good agreement with the analytical solution previously reported. The numerical method proved to be a powerful tool in the investigation of the collector sensitivity to two different flow patterns and several flow control mechanisms.

  12. Implementation of the asymptotic corrugation boundary condition in the finite difference time domain method (United States)

    Simon, Andrew E.; Kishk, Ahmed A.


    Geometry description in the finite difference time domain method is a tedious task if the geometry contains fine details, such as the case of corrugated objects. Such fine details constrain the cell size. The corrugated object can be modeled using the asymptotic corrugation boundary condition (ACBC) with a correction due to the width-over-period ratio. The ACBC forces certain field distributions inside the corrugation and allows for the removal of the corrugation teeth to have a homogeneous region with enforced field behavior that represents the actual corrugations. The ACBC approach is found to be accurate when the number of corrugations per wavelength is large (typically around 10 corrugations per wavelength). Computed results using ACBC are in good agreement with detailed simulations, which demonstrates the validity of the asymptotic approximations. Last, a major improvement in the computation time is achieved when using the ACBC to model structures that have a large number of corrugations per wavelength.

  13. Numerical simulation of the second-order Stokes theory using finite difference method

    Directory of Open Access Journals (Sweden)

    M.A. Maâtoug


    Full Text Available The nonlinear water waves problem is of great importance because, according to the mechanical modeling of this problem, a relationship exists between the potential flow and pressure exerted by water waves. The difficulty of this problem comes not only from the fact that the kinematic and dynamic conditions are nonlinear in relation to the velocity potential, but especially because they are applied at an unknown and variable free surface. To overcome this difficulty, Stokes used an approach consisting of perturbations series around the still water level to develop a nonlinear theory. This paper deals with computation of the second-order Stokes theory in order to simulate the potential flow and the surface elevation and then to deduct the pressure loads. The Crank–Nicholson scheme and the finite difference method are used. The modeling accuracy was proved and is of order two in time and in space. Some computational results are presented and discussed.

  14. Comparing finite elements and finite differences for developing diffusive models of glioma growth. (United States)

    Roniotis, Alexandros; Marias, Kostas; Sakkalis, Vangelis; Stamatakos, Georgios; Zervakis, Michalis


    Glioma is the most aggressive type of brain tumor. Several mathematical models have been developed during the last two decades, towards simulating the mechanisms that govern the development of glioma. The most common models use the diffusion-reaction equation (DRE) for simulating the spatiotemporal variation of tumor cell concentration. The proposed diffusive models have mainly used finite differences (FDs) or finite elements (FEs) for the approximation of the solution of the partial differential DRE. This paper presents experimental results on the comparison of the FEs and FDs, especially focused on the glioma model case. It is studied how the different meshes of brain can affect computational consistency, simulation time and efficiency of the model. The experiments have been studied on a test case, for which there is a known algebraic expression of the solution. Thus, it is possible to calculate the error that the different models yield.

  15. Analyses on the finite difference method by Gibou et al. for Poisson equation (United States)

    Yoon, Gangjoon; Min, Chohong


    Gibou et al. in [4] introduced a finite difference method for solving the Poisson equation in irregular domains with the Dirichlet boundary condition. Contrary to its great importance, its properties have not been mathematically analyzed, but have just been numerically observed. In this article, we present two analyses for the method. One proves that its solution is second order accurate, and the other estimates the condition number of its linear system. According to our estimation, the condition number of the unpreconditioned linear system is of size O (1 / (h ṡhmin)), and each of Jacobi, SGS, and ILU preconditioned systems is of size O (h-2). Furthermore, our analysis shows that the condition number of MILU is of size O (h-1), the most successful one.

  16. Finite difference method to find period-one gait cycles of simple passive walkers (United States)

    Dardel, Morteza; Safartoobi, Masoumeh; Pashaei, Mohammad Hadi; Ghasemi, Mohammad Hassan; Navaei, Mostafa Kazemi


    Passive dynamic walking refers to a class of bipedal robots that can walk down an incline with no actuation or control input. These bipeds are sensitive to initial conditions due to their style of walking. According to small basin of attraction of passive limit cycles, it is important to start with an initial condition in the basin of attraction of stable walking (limit cycle). This paper presents a study of the simplest passive walker with point and curved feet. A new approach is proposed to find proper initial conditions for a pair of stable and unstable period-one gait limit cycles. This methodology is based on finite difference method which can solve the nonlinear differential equations of motion on a discrete time. Also, to investigate the physical configurations of the walkers and the environmental influence such as the slope angle, the parameter analysis is applied. Numerical simulations reveal the performance of the presented method in finding two stable and unstable gait patterns.

  17. The analysis of reactively loaded microstrip antennas by finite difference time domain modelling (United States)

    Hilton, G. S.; Beach, M. A.; Railton, C. J.


    In recent years, much interest has been shown in the use of printed circuit antennas in mobile satellite and communications terminals at microwave frequencies. Although such antennas have many advantages in weight and profile size over more conventional reflector/horn configurations, they do, however, suffer from an inherently narrow bandwidth. A way of optimizing the bandwidth of such antennas by an electronic tuning technique using a loaded probe mounted within the antenna structure is examined, and the resulting far-field radiation patterns are shown. Simulation results from a 2D finite difference time domain (FDTD) model for a rectangular microstrip antenna loaded with shorting pins are given and compared to results obtained with an actual antenna. It is hoped that this work will result in a design package for the analysis of microstrip patch antenna elements.

  18. An efficient finite-difference strategy for sensitivity analysis of stochastic models of biochemical systems. (United States)

    Morshed, Monjur; Ingalls, Brian; Ilie, Silvana


    Sensitivity analysis characterizes the dependence of a model's behaviour on system parameters. It is a critical tool in the formulation, characterization, and verification of models of biochemical reaction networks, for which confident estimates of parameter values are often lacking. In this paper, we propose a novel method for sensitivity analysis of discrete stochastic models of biochemical reaction systems whose dynamics occur over a range of timescales. This method combines finite-difference approximations and adaptive tau-leaping strategies to efficiently estimate parametric sensitivities for stiff stochastic biochemical kinetics models, with negligible loss in accuracy compared with previously published approaches. We analyze several models of interest to illustrate the advantages of our method. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  19. Finite difference time domain method for simulation of damage initiation in thin film coatings (United States)

    Smalakys, Linas; Momgaudis, Balys; Grigutis, Robertas; Melninkaitis, Andrius


    Time resolved digital holography (TRDH) is a versatile tool that provides valuable insights into the dynamics of femtosecond damage initiation by providing spatiotemporal information of excited material. However, interpreting of TRDH data in thin film dielectric coatings is rather complicated without appropriate theoretical models that are able to correctly describe underlying nature of damage formation. Therefore, a model based on finite difference time domain (FDTD) method with complete Keldysh theory for nonlinear ionization of atoms and multiple rate equation (MRE) method for conduction band electrons was developed. The model was used to reproduce both temporal and spatial characteristics of TRDH experiment performed on Ta2O5 dielectric coating. Fitted material parameters were then applied to indirectly estimate LIDT of the coating.

  20. Finite difference Hermite WENO schemes for the Hamilton-Jacobi equations (United States)

    Zheng, Feng; Shu, Chi-Wang; Qiu, Jianxian


    In this paper, a new type of finite difference Hermite weighted essentially non-oscillatory (HWENO) schemes are constructed for solving Hamilton-Jacobi (HJ) equations. Point values of both the solution and its first derivatives are used in the HWENO reconstruction and evolved via time advancing. While the evolution of the solution is still through the classical numerical fluxes to ensure convergence to weak solutions, the evolution of the first derivatives of the solution is through a simple dimension-by-dimension non-conservative procedure to gain efficiency. The main advantages of this new scheme include its compactness in the spatial field and its simplicity in the reconstructions. Extensive numerical experiments in one and two dimensional cases are performed to verify the accuracy, high resolution and efficiency of this new scheme.

  1. Finite-Difference Time-Domain Simulation for Three-dimensional Polarized Light Imaging

    CERN Document Server

    Menzel, Miriam; De Raedt, Hans; Michielsen, Kristel


    Three-dimensional Polarized Light Imaging (3D-PLI) is a promising technique to reconstruct the nerve fiber architecture of human post-mortem brains from birefringence measurements of histological brain sections with micrometer resolution. To better understand how the reconstructed fiber orientations are related to the underlying fiber structure, numerical simulations are employed. Here, we present two complementary simulation approaches that reproduce the entire 3D-PLI analysis: First, we give a short review on a simulation approach that uses the Jones matrix calculus to model the birefringent myelin sheaths. Afterwards, we introduce a more sophisticated simulation tool: a 3D Maxwell solver based on a Finite-Difference Time-Domain algorithm that simulates the propagation of the electromagnetic light wave through the brain tissue. We demonstrate that the Maxwell solver is a valuable tool to better understand the interaction of polarized light with brain tissue and to enhance the accuracy of the fiber orientati...

  2. Finite difference solution for transient cooling of a radiating-conducting semitransparent layer (United States)

    Siegel, Robert


    Transient solutions were obtained for cooling a semitransparent material by radiation and conduction. The layer is in a vacuum environment so the only means for heat dissipation is by radiation from within the medium leaving through the boundaries. Heat conduction serves only to partially equalize temperatures across the layer. As the optical thickness is increased, steep temperature gradients exist near the boundaries when conduction is relatively small. A solution procedure is required that will provide accurate temperature distributions adjacent to the boundaries, or radiative heat losses will be in error. The approach utilized numerical Gaussian integration to obtain the local radiative source term, and a finite difference procedure with variable space and time increments to solve the transient energy equation.

  3. Finite difference solution for transient radiative cooling of a conducting semitransparent square region (United States)

    Siegel, R.; Molls, F. B.


    Transient solutions were obtained for a square region of heat conducting semitransparent material cooling by thermal radiation. The region is in a vacuum environment, so energy is dissipated only by radiation from within the medium leaving through its boundaries. The effect of heat conduction during the transient is to partially equalize the internal temperature distribution. As the optical thickness of the region is increased, the temperature gradients increase near the boundaries and corners, unless heat conduction is large. The solution procedure must provide accurate temperature distributions in these regions to prevent error in the calculated radiation losses. Two-dimensional numerical Gaussian integration is used to obtain the local radiative source term. A finite difference procedure with variable space and time increments is used to solve the transient energy equation. Variable spacing was used to concentrate grid points in regions with large temperature gradients.

  4. Beyond Euler's Method: Implicit Finite Differences in an Introductory ODE Course (United States)

    Kull, Trent C.


    A typical introductory course in ordinary differential equations (ODEs) exposes students to exact solution methods. However, many differential equations must be approximated with numerical methods. Textbooks commonly include explicit methods such as Euler's and Improved Euler's. Implicit methods are typically introduced in more advanced courses…

  5. Finite Difference Methods for Option Pricing under Lévy Processes: Wiener-Hopf Factorization Approach

    Directory of Open Access Journals (Sweden)

    Oleg Kudryavtsev


    factorization identity. Notice that our algorithm has the same complexity as the ones which use the explicit-implicit scheme, with a tridiagonal matrix. However, our method is more accurate. We support the advantage of the new method in terms of accuracy and convergence by using numerical experiments.

  6. COSIM: A Finite-Difference Computer Model to Predict Ternary Concentration Profiles Associated With Oxidation and Interdiffusion of Overlay-Coated Substrates (United States)

    Nesbitt, James A.


    A finite-difference computer program (COSIM) has been written which models the one-dimensional, diffusional transport associated with high-temperature oxidation and interdiffusion of overlay-coated substrates. The program predicts concentration profiles for up to three elements in the coating and substrate after various oxidation exposures. Surface recession due to solute loss is also predicted. Ternary cross terms and concentration-dependent diffusion coefficients are taken into account. The program also incorporates a previously-developed oxide growth and spalling model to simulate either isothermal or cyclic oxidation exposures. In addition to predicting concentration profiles after various oxidation exposures, the program can also be used to predict coating life based on a concentration dependent failure criterion (e.g., surface solute content drops to 2%). The computer code is written in FORTRAN and employs numerous subroutines to make the program flexible and easily modifiable to other coating oxidation problems.

  7. One-Dimensional Vacuum Steady Seepage Model of Unsaturated Soil and Finite Difference Solution

    Directory of Open Access Journals (Sweden)

    Feng Huang


    Full Text Available Vacuum tube dewatering method and light well point method have been widely used in engineering dewatering and foundation treatment. However, there is little research on the calculation method of unsaturated seepage under the effect of vacuum pressure which is generated by the vacuum well. In view of this, the one-dimensional (1D steady seepage law of unsaturated soil in vacuum field has been analyzed based on Darcy’s law, basic equations, and finite difference method. First, the gravity drainage ability is analyzed. The analysis presents that much unsaturated water can not be drained off only by gravity effect because of surface tension. Second, the unsaturated vacuum seepage equations are built up in conditions of flux boundary and waterhead boundary. Finally, two examples are analyzed based on the relationship of matric suction and permeability coefficient after boundary conditions are determined. The results show that vacuum pressure will significantly enhance the drainage ability of unsaturated water by improving the hydraulic gradient of unsaturated water.

  8. Finite difference method and algebraic polynomial interpolation for numerically solving Poisson's equation over arbitrary domains

    Directory of Open Access Journals (Sweden)

    Tsugio Fukuchi


    Full Text Available The finite difference method (FDM based on Cartesian coordinate systems can be applied to numerical analyses over any complex domain. A complex domain is usually taken to mean that the geometry of an immersed body in a fluid is complex; here, it means simply an analytical domain of arbitrary configuration. In such an approach, we do not need to treat the outer and inner boundaries differently in numerical calculations; both are treated in the same way. Using a method that adopts algebraic polynomial interpolations in the calculation around near-wall elements, all the calculations over irregular domains reduce to those over regular domains. Discretization of the space differential in the FDM is usually derived using the Taylor series expansion; however, if we use the polynomial interpolation systematically, exceptional advantages are gained in deriving high-order differences. In using the polynomial interpolations, we can numerically solve the Poisson equation freely over any complex domain. Only a particular type of partial differential equation, Poisson's equations, is treated; however, the arguments put forward have wider generality in numerical calculations using the FDM.

  9. Finite-difference time-domain modelling of through-the-Earth radio signal propagation (United States)

    Ralchenko, M.; Svilans, M.; Samson, C.; Roper, M.


    This research seeks to extend the knowledge of how a very low frequency (VLF) through-the-Earth (TTE) radio signal behaves as it propagates underground, by calculating and visualizing the strength of the electric and magnetic fields for an arbitrary geology through numeric modelling. To achieve this objective, a new software tool has been developed using the finite-difference time-domain method. This technique is particularly well suited to visualizing the distribution of electromagnetic fields in an arbitrary geology. The frequency range of TTE radio (400-9000 Hz) and geometrical scales involved (1 m resolution for domains a few hundred metres in size) involves processing a grid composed of millions of cells for thousands of time steps, which is computationally expensive. Graphics processing unit acceleration was used to reduce execution time from days and weeks, to minutes and hours. Results from the new modelling tool were compared to three cases for which an analytic solution is known. Two more case studies were done featuring complex geologic environments relevant to TTE communications that cannot be solved analytically. There was good agreement between numeric and analytic results. Deviations were likely caused by numeric artifacts from the model boundaries; however, in a TTE application in field conditions, the uncertainty in the conductivity of the various geologic formations will greatly outweigh these small numeric errors.

  10. Calculation of incompressible and compressible unsteady boundary layers by a noniterative finite difference method (United States)

    Kim, J. S.; Chang, K. S.


    Transient as well as oscillating two-dimensional boundary layers are solved numerically by using a noniterative implicit finite difference scheme which is second-order accurate both in time and space. To obtain the exact spatial initial condition, the solution is obtained of parabolic partial differential equations at the initial plane which are reduced from the full biparabolic equations valid in the main time-space domain. Formulations are made first for incompressible flow, and then for compressible boundary layers so that the effect of temperature-induced compressibility can be considered. The method is applied to the unsteady laminar boundary layers with large temporal flow disturbances. Examples are transition to Falkner-Skan flow, oscillatory Blasius flow, constantly accelerated stagnation point flow and harmonically fluctuating flow past a circular cylinder, with or without the compressibility effect taken into account for the last two cases. Comparison with the existing data has demonstrated the excellency of the present method both in accuracy and computer-time economy.

  11. High-order conservative finite difference GLM-MHD schemes for cell-centered MHD (United States)

    Mignone, Andrea; Tzeferacos, Petros; Bodo, Gianluigi


    We present and compare third- as well as fifth-order accurate finite difference schemes for the numerical solution of the compressible ideal MHD equations in multiple spatial dimensions. The selected methods lean on four different reconstruction techniques based on recently improved versions of the weighted essentially non-oscillatory (WENO) schemes, monotonicity preserving (MP) schemes as well as slope-limited polynomial reconstruction. The proposed numerical methods are highly accurate in smooth regions of the flow, avoid loss of accuracy in proximity of smooth extrema and provide sharp non-oscillatory transitions at discontinuities. We suggest a numerical formulation based on a cell-centered approach where all of the primary flow variables are discretized at the zone center. The divergence-free condition is enforced by augmenting the MHD equations with a generalized Lagrange multiplier yielding a mixed hyperbolic/parabolic correction, as in Dedner et al. [J. Comput. Phys. 175 (2002) 645-673]. The resulting family of schemes is robust, cost-effective and straightforward to implement. Compared to previous existing approaches, it completely avoids the CPU intensive workload associated with an elliptic divergence cleaning step and the additional complexities required by staggered mesh algorithms. Extensive numerical testing demonstrate the robustness and reliability of the proposed framework for computations involving both smooth and discontinuous features.

  12. Finite-difference time-domain synthesis of infrasound propagation through an absorbing atmosphere. (United States)

    de Groot-Hedlin, C


    Equations applicable to finite-difference time-domain (FDTD) computation of infrasound propagation through an absorbing atmosphere are derived and examined in this paper. It is shown that over altitudes up to 160 km, and at frequencies relevant to global infrasound propagation, i.e., 0.02-5 Hz, the acoustic absorption in dB/m varies approximately as the square of the propagation frequency plus a small constant term. A second-order differential equation is presented for an atmosphere modeled as a compressible Newtonian fluid with low shear viscosity, acted on by a small external damping force. It is shown that the solution to this equation represents pressure fluctuations with the attenuation indicated above. Increased dispersion is predicted at altitudes over 100 km at infrasound frequencies. The governing propagation equation is separated into two partial differential equations that are first order in time for FDTD implementation. A numerical analysis of errors inherent to this FDTD method shows that the attenuation term imposes additional stability constraints on the FDTD algorithm. Comparison of FDTD results for models with and without attenuation shows that the predicted transmission losses for the attenuating media agree with those computed from synthesized waveforms.

  13. Electromagnetic Wave Propagation in Body Area Networks Using the Finite-Difference-Time-Domain Method

    Directory of Open Access Journals (Sweden)

    Raj Mittra


    Full Text Available A rigorous full-wave solution, via the Finite-Difference-Time-Domain (FDTD method, is performed in an attempt to obtain realistic communication channel models for on-body wireless transmission in Body-Area-Networks (BANs, which are local data networks using the human body as a propagation medium. The problem of modeling the coupling between body mounted antennas is often not amenable to attack by hybrid techniques owing to the complex nature of the human body. For instance, the time-domain Green’s function approach becomes more involved when the antennas are not conformal. Furthermore, the human body is irregular in shape and has dispersion properties that are unique. One consequence of this is that we must resort to modeling the antenna network mounted on the body in its entirety, and the number of degrees of freedom (DoFs can be on the order of billions. Even so, this type of problem can still be modeled by employing a parallel version of the FDTD algorithm running on a cluster. Lastly, we note that the results of rigorous simulation of BANs can serve as benchmarks for comparison with the abundance of measurement data.

  14. Mimetic finite difference method for the stokes problem on polygonal meshes

    Energy Technology Data Exchange (ETDEWEB)

    Lipnikov, K [Los Alamos National Laboratory; Beirao Da Veiga, L [DIPARTIMENTO DI MATE; Gyrya, V [PENNSYLVANIA STATE UNIV; Manzini, G [ISTIUTO DI MATEMATICA


    Various approaches to extend the finite element methods to non-traditional elements (pyramids, polyhedra, etc.) have been developed over the last decade. Building of basis functions for such elements is a challenging task and may require extensive geometry analysis. The mimetic finite difference (MFD) method has many similarities with low-order finite element methods. Both methods try to preserve fundamental properties of physical and mathematical models. The essential difference is that the MFD method uses only the surface representation of discrete unknowns to build stiffness and mass matrices. Since no extension inside the mesh element is required, practical implementation of the MFD method is simple for polygonal meshes that may include degenerate and non-convex elements. In this article, we develop a MFD method for the Stokes problem on arbitrary polygonal meshes. The method is constructed for tensor coefficients, which will allow to apply it to the linear elasticity problem. The numerical experiments show the second-order convergence for the velocity variable and the first-order for the pressure.

  15. A Finite-Difference Solution of Solute Transport through a Membrane Bioreactor

    Directory of Open Access Journals (Sweden)

    B. Godongwana


    Full Text Available The current paper presents a theoretical analysis of the transport of solutes through a fixed-film membrane bioreactor (MBR, immobilised with an active biocatalyst. The dimensionless convection-diffusion equation with variable coefficients was solved analytically and numerically for concentration profiles of the solutes through the MBR. The analytical solution makes use of regular perturbation and accounts for radial convective flow as well as axial diffusion of the substrate species. The Michaelis-Menten (or Monod rate equation was assumed for the sink term, and the perturbation was extended up to second-order. In the analytical solution only the first-order limit of the Michaelis-Menten equation was considered; hence the linearized equation was solved. In the numerical solution, however, this restriction was lifted. The solution of the nonlinear, elliptic, partial differential equation was based on an implicit finite-difference method (FDM. An upwind scheme was employed for numerical stability. The resulting algebraic equations were solved simultaneously using the multivariate Newton-Raphson iteration method. The solution allows for the evaluation of the effect on the concentration profiles of (i the radial and axial convective velocity, (ii the convective mass transfer rates, (iii the reaction rates, (iv the fraction retentate, and (v the aspect ratio.

  16. Multiscale Finite-Difference-Diffusion-Monte-Carlo Method for Simulating Dendritic Solidification (United States)

    Plapp, Mathis; Karma, Alain


    We present a novel hybrid computational method to simulate accurately dendritic solidification in the low undercooling limit where the dendrite tip radius is one or more orders of magnitude smaller than the characteristic spatial scale of variation of the surrounding thermal or solutal diffusion field. The first key feature of this method is an efficient multiscale diffusion Monte Carlo (DMC) algorithm which allows off-lattice random walkers to take longer and concomitantly rarer steps with increasing distance away from the solid-liquid interface. As a result, the computational cost of evolving the large-scale diffusion field becomes insignificant when compared to that of calculating the interface evolution. The second key feature is that random walks are only permitted outside of a thin liquid layer surrounding the interface. Inside this layer and in the solid, the diffusion equation is solved using a standard finite difference algorithm that is interfaced with the DMC algorithm using the local conservation law for the diffusing quantity. Here we combine this algorithm with a previously developed phase-field formulation of the interface dynamics and demonstrate that it can accurately simulate three-dimensional dendritic growth in a previously unreachable range of low undercoolings that is of direct experimental relevance.

  17. Memory-optimized shift operator alternating direction implicit finite difference time domain method for plasma (United States)

    Song, Wanjun; Zhang, Hou


    Through introducing the alternating direction implicit (ADI) technique and the memory-optimized algorithm to the shift operator (SO) finite difference time domain (FDTD) method, the memory-optimized SO-ADI FDTD for nonmagnetized collisional plasma is proposed and the corresponding formulae of the proposed method for programming are deduced. In order to further the computational efficiency, the iteration method rather than Gauss elimination method is employed to solve the equation set in the derivation of the formulae. Complicated transformations and convolutions are avoided in the proposed method compared with the Z transforms (ZT) ADI FDTD method and the piecewise linear JE recursive convolution (PLJERC) ADI FDTD method. The numerical dispersion of the SO-ADI FDTD method with different plasma frequencies and electron collision frequencies is analyzed and the appropriate ratio of grid size to the minimum wavelength is given. The accuracy of the proposed method is validated by the reflection coefficient test on a nonmagnetized collisional plasma sheet. The testing results show that the proposed method is advantageous for improving computational efficiency and saving computer memory. The reflection coefficient of a perfect electric conductor (PEC) sheet covered by multilayer plasma and the RCS of the objects coated by plasma are calculated by the proposed method and the simulation results are analyzed.

  18. A novel and accurate finite difference method for the fractional Laplacian and the fractional Poisson problem (United States)

    Duo, Siwei; van Wyk, Hans Werner; Zhang, Yanzhi


    In this paper, we develop a novel finite difference method to discretize the fractional Laplacian (- Δ) α / 2 in hypersingular integral form. By introducing a splitting parameter, we formulate the fractional Laplacian as the weighted integral of a weak singular function, which is then approximated by the weighted trapezoidal rule. Compared to other existing methods, our method is more accurate and simpler to implement, and moreover it closely resembles the central difference scheme for the classical Laplace operator. We prove that for u ∈C 3 , α / 2 (R), our method has an accuracy of O (h2)uniformly for any α ∈ (0 , 2), while for u ∈C 1 , α / 2 (R), the accuracy is O (h 1 - α / 2). The convergence behavior of our method is consistent with that of the central difference approximation of the classical Laplace operator. Additionally, we apply our method to solve the fractional Poisson equation and study the convergence of its numerical solutions. The extensive numerical examples that accompany our analysis verify our results, as well as give additional insights into the convergence behavior of our method.

  19. Accelerated cardiac cine MRI using locally low rank and finite difference constraints. (United States)

    Miao, Xin; Lingala, Sajan Goud; Guo, Yi; Jao, Terrence; Usman, Muhammad; Prieto, Claudia; Nayak, Krishna S


    To evaluate the potential value of combining multiple constraints for highly accelerated cardiac cine MRI. A locally low rank (LLR) constraint and a temporal finite difference (FD) constraint were combined to reconstruct cardiac cine data from highly undersampled measurements. Retrospectively undersampled 2D Cartesian reconstructions were quantitatively evaluated against fully-sampled data using normalized root mean square error, structural similarity index (SSIM) and high frequency error norm (HFEN). This method was also applied to 2D golden-angle radial real-time imaging to facilitate single breath-hold whole-heart cine (12 short-axis slices, 9-13s single breath hold). Reconstruction was compared against state-of-the-art constrained reconstruction methods: LLR, FD, and k-t SLR. At 10 to 60 spokes/frame, LLR+FD better preserved fine structures and depicted myocardial motion with reduced spatio-temporal blurring in comparison to existing methods. LLR yielded higher SSIM ranking than FD; FD had higher HFEN ranking than LLR. LLR+FD combined the complimentary advantages of the two, and ranked the highest in all metrics for all retrospective undersampled cases. Single breath-hold multi-slice cardiac cine with prospective undersampling was enabled with in-plane spatio-temporal resolutions of 2×2mm(2) and 40ms. Highly accelerated cardiac cine is enabled by the combination of 2D undersampling and the synergistic use of LLR and FD constraints. Copyright © 2016 Elsevier Inc. All rights reserved.

  20. Acceleration of Linear Finite-Difference Poisson-Boltzmann Methods on Graphics Processing Units. (United States)

    Qi, Ruxi; Botello-Smith, Wesley M; Luo, Ray


    Electrostatic interactions play crucial roles in biophysical processes such as protein folding and molecular recognition. Poisson-Boltzmann equation (PBE)-based models have emerged as widely used in modeling these important processes. Though great efforts have been put into developing efficient PBE numerical models, challenges still remain due to the high dimensionality of typical biomolecular systems. In this study, we implemented and analyzed commonly used linear PBE solvers for the ever-improving graphics processing units (GPU) for biomolecular simulations, including both standard and preconditioned conjugate gradient (CG) solvers with several alternative preconditioners. Our implementation utilizes the standard Nvidia CUDA libraries cuSPARSE, cuBLAS, and CUSP. Extensive tests show that good numerical accuracy can be achieved given that the single precision is often used for numerical applications on GPU platforms. The optimal GPU performance was observed with the Jacobi-preconditioned CG solver, with a significant speedup over standard CG solver on CPU in our diversified test cases. Our analysis further shows that different matrix storage formats also considerably affect the efficiency of different linear PBE solvers on GPU, with the diagonal format best suited for our standard finite-difference linear systems. Further efficiency may be possible with matrix-free operations and integrated grid stencil setup specifically tailored for the banded matrices in PBE-specific linear systems.

  1. Solution to PDEs using radial basis function finite-differences (RBF-FD) on multiple GPUs

    Energy Technology Data Exchange (ETDEWEB)

    Bollig, Evan F., E-mail: [Department of Scientific Computing, Florida State University, 400 Dirac Science Library, Tallahassee, FL 32306 (United States); Flyer, Natasha, E-mail: [Institute for Mathematics Applied to Geosciences, National Center for Atmospheric Research, 1850 Table Mesa Dr., Boulder, CO 80305 (United States); Erlebacher, Gordon, E-mail: [Department of Scientific Computing, Florida State University, 400 Dirac Science Library, Tallahassee, FL 32306 (United States)


    This paper presents parallelization strategies for the radial basis function-finite difference (RBF-FD) method. As a generalized finite differencing scheme, the RBF-FD method functions without the need for underlying meshes to structure nodes. It offers high-order accuracy approximation and scales as O(N) per time step, with N being with the total number of nodes. To our knowledge, this is the first implementation of the RBF-FD method to leverage GPU accelerators for the solution of PDEs. Additionally, this implementation is the first to span both multiple CPUs and multiple GPUs. OpenCL kernels target the GPUs and inter-processor communication and synchronization is managed by the Message Passing Interface (MPI). We verify our implementation of the RBF-FD method with two hyperbolic PDEs on the sphere, and demonstrate up to 9x speedup on a commodity GPU with unoptimized kernel implementations. On a high performance cluster, the method achieves up to 7x speedup for the maximum problem size of 27,556 nodes.

  2. Data assimilation method for fractured reservoirs using mimetic finite differences and ensemble Kalman filter

    KAUST Repository

    Ping, Jing


    Optimal management of subsurface processes requires the characterization of the uncertainty in reservoir description and reservoir performance prediction. For fractured reservoirs, the location and orientation of fractures are crucial for predicting production characteristics. With the help of accurate and comprehensive knowledge of fracture distributions, early water/CO 2 breakthrough can be prevented and sweep efficiency can be improved. However, since the rock property fields are highly non-Gaussian in this case, it is a challenge to estimate fracture distributions by conventional history matching approaches. In this work, a method that combines vector-based level-set parameterization technique and ensemble Kalman filter (EnKF) for estimating fracture distributions is presented. Performing the necessary forward modeling is particularly challenging. In addition to the large number of forward models needed, each model is used for sampling of randomly located fractures. Conventional mesh generation for such systems would be time consuming if possible at all. For these reasons, we rely on a novel polyhedral mesh method using the mimetic finite difference (MFD) method. A discrete fracture model is adopted that maintains the full geometry of the fracture network. By using a cut-cell paradigm, a computational mesh for the matrix can be generated quickly and reliably. In this research, we apply this workflow on 2D two-phase fractured reservoirs. The combination of MFD approach, level-set parameterization, and EnKF provides an effective solution to address the challenges in the history matching problem of highly non-Gaussian fractured reservoirs.

  3. Methods for compressible fluid simulation on GPUs using high-order finite differences (United States)

    Pekkilä, Johannes; Väisälä, Miikka S.; Käpylä, Maarit J.; Käpylä, Petri J.; Anjum, Omer


    We focus on implementing and optimizing a sixth-order finite-difference solver for simulating compressible fluids on a GPU using third-order Runge-Kutta integration. Since graphics processing units perform well in data-parallel tasks, this makes them an attractive platform for fluid simulation. However, high-order stencil computation is memory-intensive with respect to both main memory and the caches of the GPU. We present two approaches for simulating compressible fluids using 55-point and 19-point stencils. We seek to reduce the requirements for memory bandwidth and cache size in our methods by using cache blocking and decomposing a latency-bound kernel into several bandwidth-bound kernels. Our fastest implementation is bandwidth-bound and integrates 343 million grid points per second on a Tesla K40t GPU, achieving a 3 . 6 × speedup over a comparable hydrodynamics solver benchmarked on two Intel Xeon E5-2690v3 processors. Our alternative GPU implementation is latency-bound and achieves the rate of 168 million updates per second.

  4. Design and development of an air humidifier using finite difference method for a solar desalination plant (United States)

    Chiranjeevi, C.; Srinivas, T.


    Humidifier is an important component in air humidification-dehumidification desalination plant for fresh water production. Liquid to air flow rate ratio is optimization is reported for an industrial cooling towers but for an air humidifier it is not addressed. The current work is focused on the design and analysis of an air humidifier for solar desalination plant to maximize the yield with better humidification, using finite difference method (FDM). The outlet conditions of air from the humidifier are theoretically predicted by FDM with the given inlet conditions, which will be further used in the design calculation of the humidifier. Hot water to air flow rate ratio and inlet hot water temperature are identified as key operating parameters to evaluate the humidifier performance. The maximum and optimal values of mass flow rate ratio of water to air are found to be 2.15 and 1.5 respectively using packing function and Merkel Integral. The height of humidifier is constrained to 1.5 m and the diameter of the humidifier is found as 0.28m. The performance of humidifier and outlet conditions of air are simulated using FDM and compared with experimental results. The obtained results are within an agreeable range of deviation.

  5. A Family of Sixth-Order Compact Finite-Difference Schemes for the Three-Dimensional Poisson Equation

    Directory of Open Access Journals (Sweden)

    Yaw Kyei


    Full Text Available We derive a family of sixth-order compact finite-difference schemes for the three-dimensional Poisson's equation. As opposed to other research regarding higher-order compact difference schemes, our approach includes consideration of the discretization of the source function on a compact finite-difference stencil. The schemes derived approximate the solution to Poisson's equation on a compact stencil, and thus the schemes can be easily implemented and resulting linear systems are solved in a high-performance computing environment. The resulting discretization is a one-parameter family of finite-difference schemes which may be further optimized for accuracy and stability. Computational experiments are implemented which illustrate the theoretically demonstrated truncation errors.

  6. A finite difference method for a conservative Allen-Cahn equation on non-flat surfaces (United States)

    Kim, Junseok; Jeong, Darae; Yang, Seong-Deog; Choi, Yongho


    We present an efficient numerical scheme for the conservative Allen-Cahn (CAC) equation on various surfaces embedded in a narrow band domain in the three-dimensional space. We apply a quasi-Neumann boundary condition on the narrow band domain boundary using the closest point method. This boundary treatment allows us to use the standard Cartesian Laplacian operator instead of the Laplace-Beltrami operator. We apply a hybrid operator splitting method for solving the CAC equation. First, we use an explicit Euler method to solve the diffusion term. Second, we solve the nonlinear term by using a closed-form solution. Third, we apply a space-time-dependent Lagrange multiplier to conserve the total quantity. The overall scheme is explicit in time and does not need iterative steps; therefore, it is fast. A series of numerical experiments demonstrate the accuracy and efficiency of the proposed hybrid scheme.

  7. An Adaptive Finite Difference Method for Hyperbolic Systems in OneSpace Dimension

    Energy Technology Data Exchange (ETDEWEB)

    Bolstad, John H. [Stanford Univ., CA (United States); Univ. of California, Berkeley, CA (United States)


    Many problems of physical interest have solutions which are generally quite smooth in a large portion of the region of interest, but have local phenomena such as shocks, discontinuities or large gradients which require much more accurate approximations or finer grids for reasonable accuracy. Examples are atmospheric fronts, ocean currents, and geological discontinuities. In this thesis we develop and partially analyze an adaptive finite difference mesh refinement algorithm for the initial boundary value problem for hyperbolic systems in one space dimension. The method uses clusters of uniform grids which can ''move'' along with pulses or steep gradients appearing in the calculation, and which are superimposed over a uniform coarse grid. Such refinements are created, destroyed, merged, separated, recursively nested or moved based on estimates of the local truncation error. We use a four-way linked tree and sequentially allocated deques (double-ended queues) to perform these operations efficiently. The local truncation error in the interior of the region is estimated using a three-step Richardson extrapolation procedure, which can also be considered a deferred correction method. At the boundaries we employ differences to estimate the error. Our algorithm was implemented using a portable, extensible Fortran preprocessor, to which we added records and pointers. The method is applied to three model problems: the first order wave equation, the second order wave equation, and the inviscid Burgers equation. For the first two model problems our algorithm is shown to be three to five times more efficient (in computing time) than the use of a uniform coarse mesh, for the same accuracy. Furthermore, to our knowledge, our algorithm is the only one which adaptively treats time-dependent boundary conditions for hyperbolic systems.

  8. Analysis of attenuation and dispersion of Rayleigh waves in viscoelastic media by finite-difference modeling (United States)

    Yuan, Shichuan; Song, Xianhai; Cai, Wei; Hu, Ying


    Viscoelasticity of Earth media has an important influence on Rayleigh-wave propagation. Therefore, it is necessary to study the attenuation and dispersion of Rayleigh-wave by numerical modeling to better understand Rayleigh-wave behaviors in Earth media. Modeling adopts a staggered finite-difference (FD) scheme, which calculates the spatial derivatives by a 12th-order operator and the time derivatives by the fourth-order Runge-Kutta method. In time-space domain, the accuracy of FD method is demonstrated through comparing the modeling results with the analytical solution in an elastic half-space. In frequency-velocity domain, the correctness of modeling results is verified via comparing the dispersive images with the theoretical dispersion curves of Rayleigh-wave. The attenuation and dispersion of Rayleigh-wave are analyzed by comparisons between elastic and viscoelastic modeling results in the homogeneous half-space models in terms of the wave field snapshots, the synthetic seismograms, and the dispersive images, respectively. The two-layer models are also simulated to further investigate the attenuation and dispersion of Rayleigh-wave in viscoelastic layered media. Results show that the viscoelastic Rayleigh-wave presents substantial differences in amplitude and phase velocity compared with the elastic case. Viscoelasticity of media arouses amplitude attenuation of Rayleigh-wave. The high-frequency waves are attenuated more severely than the lower-frequency waves, and the attenuation degree is severe increasingly with offset increasing. Viscoelasticity of media also causes the phase velocity dispersion of Rayleigh-wave. The phase velocity ratio of viscoelastic Rayleigh-wave respecting to the corresponding elastic one increases with frequency, and the resolution of dispersion energy is lower than the elastic one. The attenuation and dispersion of Rayleigh-wave are prominent increasingly with Q decreasing.

  9. Poroelastic finite-difference modeling for ultrasonic waves in digital porous cores (United States)

    Fu, Li-Yun; Zhang, Yan; Pei, Zhenglin; Wei, Wei; Zhang, Luxin


    Scattering attenuation in short wavelengths has long been interesting to geophysicists. Ultrasonic coda waves, observed as the tail portion of ultrasonic wavetrains in laboratory ultrasonic measurements, are important for such studies where ultrasonic waves interact with small-scale random heterogeneities on a scale of micrometers, but often ignored as noises because of the contamination of boundary reflections from the side ends of a sample core. Numerical simulations with accurate absorbing boundary can provide insight into the effect of boundary reflections on coda waves in laboratory experiments. The simulation of wave propagation in digital and heterogeneous porous cores really challenges numerical techniques by digital image of poroelastic properties, numerical dispersion at high frequency and strong heterogeneity, and accurate absorbing boundary schemes at grazing incidence. To overcome these difficulties, we present a staggered-grid high-order finite-difference (FD) method of Biot's poroelastic equations, with an arbitrary even-order (2 L) accuracy to simulate ultrasonic wave propagation in digital porous cores with strong heterogeneity. An unsplit convolutional perfectly matched layer (CPML) absorbing boundary, which improves conventional PML methods at grazing incidence with less memory and better computational efficiency, is employed in the simulation to investigate the influence of boundary reflections on ultrasonic coda waves. Numerical experiments with saturated poroelastic media demonstrate that the 2 L FD scheme with the CPML for ultrasonic wave propagation significantly improves stability conditions at strong heterogeneity and absorbing performance at grazing incidence. The boundary reflections from the artificial boundary surrounding the digital core decay fast with the increase of CPML thicknesses, almost disappearing at the CPML thickness of 15 grids. Comparisons of the resulting ultrasonic coda Q sc values between the numerical and experimental

  10. Finite difference analysis of an advance core pre-reinforcement system for Toulon's south tube

    Directory of Open Access Journals (Sweden)

    Fethi Kitchah


    Full Text Available The stability of shallow tunnels excavated in full face has been a major challenge to the scientific community for a long time. In recent years, new techniques based on the installation of a pre-reinforcement system ahead of the tunnel face were developed to control the deformations and surface settlements induced by the excavation and to ensure the sustainability of the tunnel in the long term. In this paper, a finite difference numerical simulation was conducted to study the behaviors and effects of two pre-reinforcement systems, i.e. the face bolting and the umbrella arch system installed in a section of southern Toulon tunnel in France. For this purpose, two approaches were taken and compared: a two-dimensional (2D approach based on the convergence–confinement method, and a three-dimensional (3D approach taking into account the complete modeling of the tunnel. A 2D numerical back-analysis was performed to identify the geomechanical parameters that offer satisfactory agreement with the measurement results. The limit of this method lies in the exact choice of the stress relaxation ratio λ. To overcome this uncertainty, a 3D model was developed, which permitted to study the influence of different pre-support systems on the reaction of ground mass. Both 2D and 3D numerical approaches have been fitted to measurements recorded in a section of the Toulon tunnel and the very satisfactory correspondence has allowed validating the simulations. The results show that the 3D numerical analysis with a full discretization of the inclusions seems unquestionably the most reliable approach.

  11. Performance prediction of finite-difference solvers for different computer architectures (United States)

    Louboutin, Mathias; Lange, Michael; Herrmann, Felix J.; Kukreja, Navjot; Gorman, Gerard


    The life-cycle of a partial differential equation (PDE) solver is often characterized by three development phases: the development of a stable numerical discretization; development of a correct (verified) implementation; and the optimization of the implementation for different computer architectures. Often it is only after significant time and effort has been invested that the performance bottlenecks of a PDE solver are fully understood, and the precise details varies between different computer architectures. One way to mitigate this issue is to establish a reliable performance model that allows a numerical analyst to make reliable predictions of how well a numerical method would perform on a given computer architecture, before embarking upon potentially long and expensive implementation and optimization phases. The availability of a reliable performance model also saves developer effort as it both informs the developer on what kind of optimisations are beneficial, and when the maximum expected performance has been reached and optimisation work should stop. We show how discretization of a wave-equation can be theoretically studied to understand the performance limitations of the method on modern computer architectures. We focus on the roofline model, now broadly used in the high-performance computing community, which considers the achievable performance in terms of the peak memory bandwidth and peak floating point performance of a computer with respect to algorithmic choices. A first principles analysis of operational intensity for key time-stepping finite-difference algorithms is presented. With this information available at the time of algorithm design, the expected performance on target computer systems can be used as a driver for algorithm design.

  12. The analytic coarse-mesh finite-difference method for multigroup and multidimensional diffusion calculations

    Energy Technology Data Exchange (ETDEWEB)

    Aragones, J.M.; Ahnert, C.; Garcia-Herranz, N. [Madrid Universidad Politecnica, Dept. of Nuclear Engineering (Spain)


    In this work we develop and demonstrate the Analytic Coarse-Mesh Finite-Difference (ACMFD) method for multigroup, with any number of groups, and multidimensional diffusion calculations of steady-state and kinetics and external source problems. The first step in this method is to reduce the coupled system of the G multigroup diffusion equations, inside any homogenized region (or node) of any size, to the G independent modal equations in the real or complex Eigen-space of the G*G multigroup matrix. The mathematical and numerical analysis of this step is discussed for several reactor media and number of groups. As second step, we discuss the analytical solutions in the general (complex) modal Eigen-space for 1-dimensional plane geometry, deriving the generalized Chao's relation among the surface fluxes and the net currents, at a given interface, and the node average fluxes, essential in the ACMFD method. We also introduce here the treatment of heterogeneous nodes, through modal interface flux discontinuity factors, and show the analytical and numerical application to core-reflector problems, for a single infinite reflector and for reflectors with two layers of different materials. Then, we address the general multidimensional case, with both rectangular X-Y-Z and triangular-Z geometries considered, showing the equivalency of the methods of transverse integration and incomplete expansion of the multidimensional fluxes, in the real or complex modal Eigen-space of the multigroup matrix. A non-linear iteration scheme is implemented to solve the multigroup multidimensional nodal problem, which has shown a fast and robust convergence in proof-of-principle numerical applications to realistic PWR cores, with heterogeneous fuel assemblies and reflectors. (authors)

  13. A finite difference approach to despiking in-stationary velocity data - tested on a triple-lidar

    DEFF Research Database (Denmark)

    Meyer Forsting, Alexander Raul; Troldborg, Niels


    A novel despiking method is presented for in-stationary wind lidar velocity measurements. A finite difference approach yields the upper and lower bounds for a valid velocity reading. The sole input to the algorithm is the velocity series and optionally a far- field reference to the temporal...

  14. Application of the finite-difference contrast-source inversion algorithm to seismic full-waveform data

    NARCIS (Netherlands)

    Abubakar, A.; Hu, W.; Habashy, T.M.; Van den Berg, P.M.


    We have applied the finite-difference contrast-source inversion (FDCSI) method to seismic full-waveform inversion problems. The FDCSI method is an iterative nonlinear inversion algorithm. However, unlike the nonlinear conjugate gradient method and the Gauss-Newton method, FDCSI does not solve any

  15. High-Accuracy Approximation of High-Rank Derivatives: Isotropic Finite Differences Based on Lattice-Boltzmann Stencils

    Directory of Open Access Journals (Sweden)

    Keijo Kalervo Mattila


    Full Text Available We propose isotropic finite differences for high-accuracy approximation of high-rank derivatives. These finite differences are based on direct application of lattice-Boltzmann stencils. The presented finite-difference expressions are valid in any dimension, particularly in two and three dimensions, and any lattice-Boltzmann stencil isotropic enough can be utilized. A theoretical basis for the proposed utilization of lattice-Boltzmann stencils in the approximation of high-rank derivatives is established. In particular, the isotropy and accuracy properties of the proposed approximations are derived directly from this basis. Furthermore, in this formal development, we extend the theory of Hermite polynomial tensors in the case of discrete spaces and present expressions for the discrete inner products between monomials and Hermite polynomial tensors. In addition, we prove an equivalency between two approaches for constructing lattice-Boltzmann stencils. For the numerical verification of the presented finite differences, we introduce 5th-, 6th-, and 8th-order two-dimensional lattice-Boltzmann stencils.

  16. High-accuracy approximation of high-rank derivatives: isotropic finite differences based on lattice-Boltzmann stencils. (United States)

    Mattila, Keijo Kalervo; Hegele Júnior, Luiz Adolfo; Philippi, Paulo Cesar


    We propose isotropic finite differences for high-accuracy approximation of high-rank derivatives. These finite differences are based on direct application of lattice-Boltzmann stencils. The presented finite-difference expressions are valid in any dimension, particularly in two and three dimensions, and any lattice-Boltzmann stencil isotropic enough can be utilized. A theoretical basis for the proposed utilization of lattice-Boltzmann stencils in the approximation of high-rank derivatives is established. In particular, the isotropy and accuracy properties of the proposed approximations are derived directly from this basis. Furthermore, in this formal development, we extend the theory of Hermite polynomial tensors in the case of discrete spaces and present expressions for the discrete inner products between monomials and Hermite polynomial tensors. In addition, we prove an equivalency between two approaches for constructing lattice-Boltzmann stencils. For the numerical verification of the presented finite differences, we introduce 5th-, 6th-, and 8th-order two-dimensional lattice-Boltzmann stencils.

  17. A Moving Mesh Finite Difference Method for Non-Monotone Solutions of Non-Equilibrium Equations in Porous Media

    NARCIS (Netherlands)

    Zhang, Hong; Zegeling, Paul Andries


    An adaptive moving mesh finite difference method is presented to solve two types of equations with dynamic capillary pressure effect in porous media. One is the non-equilibrium Richards Equation and the other is the modified Buckley-Leverett equation. The governing equations are discretized with an

  18. Comparison of finite difference and finite element methods for simulating two-dimensional scattering of elastic waves

    NARCIS (Netherlands)

    Frehner, Marcel; Schmalholz, Stefan M.; Saenger, Erik H.; Steeb, Holger Karl


    Two-dimensional scattering of elastic waves in a medium containing a circular heterogeneity is investigated with an analytical solution and numerical wave propagation simulations. Different combinations of finite difference methods (FDM) and finite element methods (FEM) are used to numerically solve

  19. Performance and scalability of finite-difference and finite-element wave-propagation modeling on Intel's Xeon Phi

    NARCIS (Netherlands)

    Zhebel, E.; Minisini, S.; Kononov, A.; Mulder, W.A.


    With the rapid developments in parallel compute architectures, algorithms for seismic modeling and imaging need to be reconsidered in terms of parallelization. The aim of this paper is to compare scalability of seismic modeling algorithms: finite differences, continuous mass-lumped finite elements

  20. Solving the maxwell equations by the Chebyshev method : A one-step finite-difference time-domain algorithm

    NARCIS (Netherlands)

    de Raedt, H.A.; Michielsen, K.F L; Kole, J.S.; Figge, M.T


    We present a one-step algorithm that solves the Maxwell equations for systems with spatially varying permittivity and permeability by the Chebyshev method. We demonstrate that this algorithm may be orders of magnitude more efficient than current finite-difference time-domain (FDTD) algorithms.

  1. Statistical parameters of random heterogeneity estimated by analysing coda waves based on finite difference method (United States)

    Emoto, K.; Saito, T.; Shiomi, K.


    Short-period (seismic waves and randomly distributed small-scale heterogeneities. Statistical properties of the random heterogeneities have been estimated by analysing short-period seismograms. However, generally, the small-scale random heterogeneity is not taken into account for the modelling of long-period (>2 s) seismograms. We found that the energy of the coda of long-period seismograms shows a spatially flat distribution. This phenomenon is well known in short-period seismograms and results from the scattering by small-scale heterogeneities. We estimate the statistical parameters that characterize the small-scale random heterogeneity by modelling the spatiotemporal energy distribution of long-period seismograms. We analyse three moderate-size earthquakes that occurred in southwest Japan. We calculate the spatial distribution of the energy density recorded by a dense seismograph network in Japan at the period bands of 8-16 s, 4-8 s and 2-4 s and model them by using 3-D finite difference (FD) simulations. Compared to conventional methods based on statistical theories, we can calculate more realistic synthetics by using the FD simulation. It is not necessary to assume a uniform background velocity, body or surface waves and scattering properties considered in general scattering theories. By taking the ratio of the energy of the coda area to that of the entire area, we can separately estimate the scattering and the intrinsic absorption effects. Our result reveals the spectrum of the random inhomogeneity in a wide wavenumber range including the intensity around the corner wavenumber as P(m) = 8πε2a3/(1 + a2m2)2, where ε = 0.05 and a = 3.1 km, even though past studies analysing higher-frequency records could not detect the corner. Finally, we estimate the intrinsic attenuation by modelling the decay rate of the energy. The method proposed in this study is suitable for quantifying the statistical properties of long-wavelength subsurface random inhomogeneity, which

  2. Numerical simulation of particulate flows using a hybrid of finite difference and boundary integral methods. (United States)

    Bhattacharya, Amitabh; Kesarkar, Tejas


    A combination of finite difference (FD) and boundary integral (BI) methods is used to formulate an efficient solver for simulating unsteady Stokes flow around particles. The two-dimensional (2D) unsteady Stokes equation is being solved on a Cartesian grid using a second order FD method, while the 2D steady Stokes equation is being solved near the particle using BI method. The two methods are coupled within the viscous boundary layer, a few FD grid cells away from the particle, where solutions from both FD and BI methods are valid. We demonstrate that this hybrid method can be used to accurately solve for the flow around particles with irregular shapes, even though radius of curvature of the particle surface is not resolved by the FD grid. For dilute particle concentrations, we construct a virtual envelope around each particle and solve the BI problem for the flow field located between the envelope and the particle. The BI solver provides velocity boundary condition to the FD solver at "boundary" nodes located on the FD grid, adjacent to the particles, while the FD solver provides the velocity boundary condition to the BI solver at points located on the envelope. The coupling between FD method and BI method is implicit at every time step. This method allows us to formulate an O(N) scheme for dilute suspensions, where N is the number of particles. For semidilute suspensions, where particles may cluster, an envelope formation method has been formulated and implemented, which enables solving the BI problem for each individual particle cluster, allowing efficient simulation of hydrodynamic interaction between particles even when they are in close proximity. The method has been validated against analytical results for flow around a periodic array of cylinders and for Jeffrey orbit of a moving ellipse in shear flow. Simulation of multiple force-free irregular shaped particles in the presence of shear in a 2D slit flow has been conducted to demonstrate the robustness of

  3. Benchmarking a new closed-form thermal analysis technique against a traditional lumped parameter, finite-difference method

    Energy Technology Data Exchange (ETDEWEB)

    Huff, K. D.; Bauer, T. H. (Nuclear Engineering Division)


    A benchmarking effort was conducted to determine the accuracy of a new analytic generic geology thermal repository model developed at LLNL relative to a more traditional, numerical, lumped parameter technique. The fast-running analytical thermal transport model assumes uniform thermal properties throughout a homogenous storage medium. Arrays of time-dependent heat sources are included geometrically as arrays of line segments and points. The solver uses a source-based linear superposition of closed form analytical functions from each contributing point or line to arrive at an estimate of the thermal evolution of a generic geologic repository. Temperature rise throughout the storage medium is computed as a linear superposition of temperature rises. It is modeled using the MathCAD mathematical engine and is parameterized to allow myriad gridded repository geometries and geologic characteristics [4]. It was anticipated that the accuracy and utility of the temperature field calculated with the LLNL analytical model would provide an accurate 'birds-eye' view in regions that are many tunnel radii away from actual storage units; i.e., at distances where tunnels and individual storage units could realistically be approximated as physical lines or points. However, geometrically explicit storage units, waste packages, tunnel walls and close-in rock are not included in the MathCAD model. The present benchmarking effort therefore focuses on the ability of the analytical model to accurately represent the close-in temperature field. Specifically, close-in temperatures computed with the LLNL MathCAD model were benchmarked against temperatures computed using geometrically-explicit lumped-parameter, repository thermal modeling technique developed over several years at ANL using the SINDAG thermal modeling code [5]. Application of this numerical modeling technique to underground storage of heat generating nuclear waste streams within the proposed YMR Site has been widely

  4. A finite difference thermal model of a cylindrical microwave heating applicator using locally conformal overlapping grids: part I--theoretical formulation. (United States)

    Al-Rizzo, Hussain M; Tranquilla, Jim M; Feng, Ma


    In this paper, we present a versatile mathematical formulation of a newly developed 3-D locally conformal Finite Difference (FD) thermal algorithm developed specificallyfor coupled electromagnetic (EM) and heat diffusion simulations utilizing Overlapping Grids (OGFD) in the Cartesian and cylindrical coordinate systems. The motivation for this research arises from an attempt to characterize the dominant thermal transport phenomena typically encountered during the process cycle of a high-power, microwave-assisted material processing system employing a geometrically composite cylindrical multimode heating furnace. The cylindrical FD scheme is only applied to the outer shell of the housing cavity whereas the Cartesian FD scheme is used to advance the temperature elsewhere including top and bottom walls, and most of the inner region of the cavity volume. The temperature dependency of the EM constitutive and thermo-physical parameters of the material being processed is readily accommodated into the OGFD update equations. The time increment, which satisfies the stability constraint of the explicit OGFD time-marching scheme, is derived. In a departure from prior work, the salient features of the proposed algorithm are first, the locally conformal discretization scheme accurately describes the diffusion of heat and second, significant heat-loss mechanisms usually encountered in microwave heating problems at the interfacial boundary temperature nodes have been considered. These include convection and radiation between the surface of the workload and air inside the cavity, heat convection and radiation between the inner cavity walls and interior cavity volume, and free cooling of the outermost cavity walls.

  5. Depropagation and propagation simulation of the acoustic waves by using finite differences operators; Simulacao da propagacao e depropagacao de ondas acusticas usando operadores de diferencas finitas

    Energy Technology Data Exchange (ETDEWEB)

    Botelho, Marco A.B.; Santos, Roberto H.M. dos; Silva, Marcelo S. [Universidade Federal da Bahia (UFBA), Salvador, BA (Brazil). Centro de Pesquisa em Geofisica e Geologia


    The numerical simulation of shot gathers over a (2D) velocity field, which corresponds to a model of Atlantic continental shelf, at the continental break area, using a typical model of the Brazilian Atlantic coast, suggested by PETROBRAS. The finite difference technique (FD) is used to solve the second derivatives in time and space of the acoustic wave equation, using fourth order operators to solve the spatial derivatives and second order operators to solve the time derivative. It is applied an explicitly scheme to calculate the pressure field values at a future instant. The use of rectangular mesh helps to generate data less noisy, since we can control better the numerical dispersion. The source functions (wavelets), as the first and the second derivatives of the gaussian function, are proper to generate synthetic seismograms with the FD method, because they allow an easy discretization. On the forward modeling, which is the simulation of wave fields, allows to control the stability limit of the method, wherever be the given velocity field, just employing compatible small values of the sample rate. The algorithm developed here, which uses only the FD technique, is able to perform the forward modeling, saving the image times, which can be used latter to perform the retropropagation of the wave field and thus migrate the source-gathers the reverse time extrapolation is able to test the used velocity model, and detect determine errors up to 5% on the used velocity model. (author)

  6. Modeling arbitrarily directed slots that are narrow both in width and depth with regard to the FDTD spatial cell. [Finite Difference-Time Domain (TDTD)

    Energy Technology Data Exchange (ETDEWEB)

    Riley, D.J.; Turner, C.D.


    The Hybrid Thin-Slot Algorithm (HTSA) integrates a transient integral-equation solution for an aperture in an infinite plane into a finite-difference time-domain (FDTD) code. The technique was introduced for linear apertures and was extended to include wall loss and lossy internal gaskets. A general implementation for arbitrary thin slots is briefly described here. The 3-D FDTD-code TSAR was selected for the implementation. The HTSA does not provide universal solutions to the narrow slot problem, but has merits appropriate for particular applications. The HTSA is restricted to planar slots, but can solve the important case that both the width and depth of the slot are narrow compared to the FDTD spatial cell. IN addition, the HTSA is not bound to the FDTD discrete spatial and time increments, and therefore, high-resolution solutions for the slot physics are possible. The implementation of the HTSA into TSAR is based upon a slot data file'' that includes the cell indices where the desired slots are exist within the FDTD mesh. For an HTSA-defined slot, the wall region local to the slot is shorted, and therefore, to change the slot's topology simply requires altering the file to include the desired cells. 7 refs.

  7. Twisted Reed-Solomon Codes

    DEFF Research Database (Denmark)

    Beelen, Peter; Puchinger, Sven; Rosenkilde ne Nielsen, Johan


    We present a new general construction of MDS codes over a finite field Fq. We describe two explicit subclasses which contain new MDS codes of length at least q/2 for all values of q ≥ 11. Moreover, we show that most of the new codes are not equivalent to a Reed-Solomon code.......We present a new general construction of MDS codes over a finite field Fq. We describe two explicit subclasses which contain new MDS codes of length at least q/2 for all values of q ≥ 11. Moreover, we show that most of the new codes are not equivalent to a Reed-Solomon code....

  8. A Fast Finite-Difference Time Domain Simulation Method for the Source-Stirring Reverberation Chamber


    Wenxing Li; Chongyi Yue; Atef Elsherbeni


    Numerical analysis methods are often employed to improve the efficiency of the design and application of the source-stirring reverberation chamber. However, the state of equilibrium of the field inside the chamber is hard to reach. In this paper, we present a fast simulation method, which is able to significantly decrease the simulation time of the source-stirring reverberation chamber. The mathematical model of this method is given in detail and home-made FDTD code is employed to conduct the...

  9. Finite-difference theory for sound propagation in a lined duct with uniform flow using the wave envelope concept (United States)

    Baumeister, K. J.


    Finite difference equations are derived for sound propagation in a two dimensional, straight, soft wall duct with a uniform flow by using the wave envelope concept. This concept reduces the required number of finite difference grid points by one to two orders of magnitude depending on the length of the duct and the frequency of the sound. The governing acoustic difference equations in complex notation are derived. An exit condition is developed that allows a duct of finite length to simulate the wave propagation in an infinitely long duct. Sample calculations presented for a plane wave incident upon the acoustic liner show the numerical theory to be in good agreement with closed form analytical theory. Complete pressure and velocity printouts are given to some sample problems and can be used to debug and check future computer programs.

  10. Finite difference method for inner-layer equations in the resistive MagnetoHydroDynamic stability analysis

    Energy Technology Data Exchange (ETDEWEB)

    Tokuda, Shinji [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment; Watanabe, Tomoko


    The matching problem in resistive MagnetoHydroDynamic stability analysis by the asymptotic matching method has been reformulated as an initial-boundary value problem for the inner-layer equations describing the plasma dynamics in the thin layer around a rational surface. The third boundary conditions at boundaries of a finite interval are imposed on the inner layer equations in the formulation instead of asymptotic conditions at infinities. The finite difference method for this problem has been applied to model equations whose solutions are known in a closed form. It has been shown that the initial value problem and the associated eigenvalue problem for the model equations can be solved by the finite difference method with numerical stability. The formulation presented here enables the asymptotic matching method to be a practical method for the resistive MHD stability analysis. (author)

  11. Newton's method applied to finite-difference approximations for the steady-state compressible Navier-Stokes equations (United States)

    Bailey, Harry E.; Beam, Richard M.


    Finite-difference approximations for steady-state compressible Navier-Stokes equations, whose two spatial dimensions are written in generalized curvilinear coordinates and strong conservation-law form, are presently solved by means of Newton's method in order to obtain a lifting-airfoil flow field under subsonic and transonnic conditions. In addition to ascertaining the computational requirements of an initial guess ensuring convergence and the degree of computational efficiency obtainable via the approximate Newton method's freezing of the Jacobian matrices, attention is given to the need for auxiliary methods assessing the temporal stability of steady-state solutions. It is demonstrated that nonunique solutions of the finite-difference equations are obtainable by Newton's method in conjunction with a continuation method.

  12. A Fast Implicit Finite Difference Method for Fractional Advection-Dispersion Equations with Fractional Derivative Boundary Conditions

    Directory of Open Access Journals (Sweden)

    Taohua Liu


    Full Text Available Fractional advection-dispersion equations, as generalizations of classical integer-order advection-dispersion equations, are used to model the transport of passive tracers carried by fluid flow in a porous medium. In this paper, we develop an implicit finite difference method for fractional advection-dispersion equations with fractional derivative boundary conditions. First-order consistency, solvability, unconditional stability, and first-order convergence of the method are proven. Then, we present a fast iterative method for the implicit finite difference scheme, which only requires storage of O(K and computational cost of O(Klog⁡K. Traditionally, the Gaussian elimination method requires storage of O(K2 and computational cost of O(K3. Finally, the accuracy and efficiency of the method are checked with a numerical example.

  13. Single-cone finite-difference schemes for the (2+1)-dimensional Dirac equation in general electromagnetic textures (United States)

    Pötz, Walter


    A single-cone finite-difference lattice scheme is developed for the (2+1)-dimensional Dirac equation in presence of general electromagnetic textures. The latter is represented on a (2+1)-dimensional staggered grid using a second-order-accurate finite difference scheme. A Peierls-Schwinger substitution to the wave function is used to introduce the electromagnetic (vector) potential into the Dirac equation. Thereby, the single-cone energy dispersion and gauge invariance are carried over from the continuum to the lattice formulation. Conservation laws and stability properties of the formal scheme are identified by comparison with the scheme for zero vector potential. The placement of magnetization terms is inferred from consistency with the one for the vector potential. Based on this formal scheme, several numerical schemes are proposed and tested. Elementary examples for single-fermion transport in the presence of in-plane magnetization are given, using material parameters typical for topological insulator surfaces.

  14. A Radial Basis Function (RBF)-Finite Difference (FD) Method for Diffusion and Reaction-Diffusion Equations on Surfaces


    Shankar, Varun; Wright, Grady B.; Kirby, Robert M.; Fogelson, Aaron L.


    In this paper, we present a method based on Radial Basis Function (RBF)-generated Finite Differences (FD) for numerically solving diffusion and reaction-diffusion equations (PDEs) on closed surfaces embedded in $\\mathbb{R}^d$. Our method uses a method-of-lines formulation, in which surface derivatives that appear in the PDEs are approximated locally using RBF interpolation. The method requires only scattered nodes representing the surface and normal vectors at those scattered nodes. All compu...

  15. Estimation of State of Charge for Lithium-Ion Battery Based on Finite Difference Extended Kalman Filter


    Ze Cheng; Jikao Lv; Yanli Liu; Zhihao Yan


    An accurate estimation of the state of charge (SOC) of the battery is of great significance for safe and efficient energy utilization of electric vehicles. Given the nonlinear dynamic system of the lithium-ion battery, the parameters of the second-order RC equivalent circuit model were calibrated and optimized using a nonlinear least squares algorithm in the Simulink parameter estimation toolbox. A comparison was made between this finite difference extended Kalman filter (FDEKF) and the stand...

  16. SBP-SAT finite difference discretization of acoustic wave equations on staggered block-wise uniform grids

    KAUST Repository

    Gao, Longfei


    We consider the numerical simulation of the acoustic wave equations arising from seismic applications, for which staggered grid finite difference methods are popular choices due to their simplicity and efficiency. We relax the uniform grid restriction on finite difference methods and allow the grids to be block-wise uniform with nonconforming interfaces. In doing so, variations in the wave speeds of the subterranean media can be accounted for more efficiently. Staggered grid finite difference operators satisfying the summation-by-parts (SBP) property are devised to approximate the spatial derivatives appearing in the acoustic wave equation. These operators are applied within each block independently. The coupling between blocks is achieved through simultaneous approximation terms (SATs), which impose the interface condition weakly, i.e., by penalty. Ratio of the grid spacing of neighboring blocks is allowed to be rational number, for which specially designed interpolation formulas are presented. These interpolation formulas constitute key pieces of the simultaneous approximation terms. The overall discretization is shown to be energy-conserving and examined on test cases of both theoretical and practical interests, delivering accurate and stable simulation results.

  17. Implementations of the optimal multigrid algorithm for the cell-centered finite difference on equilateral triangular grids

    Energy Technology Data Exchange (ETDEWEB)

    Ewing, R.E.; Saevareid, O.; Shen, J. [Texas A& M Univ., College Station, TX (United States)


    A multigrid algorithm for the cell-centered finite difference on equilateral triangular grids for solving second-order elliptic problems is proposed. This finite difference is a four-point star stencil in a two-dimensional domain and a five-point star stencil in a three dimensional domain. According to the authors analysis, the advantages of this finite difference are that it is an O(h{sup 2})-order accurate numerical scheme for both the solution and derivatives on equilateral triangular grids, the structure of the scheme is perhaps the simplest, and its corresponding multigrid algorithm is easily constructed with an optimal convergence rate. They are interested in relaxation of the equilateral triangular grid condition to certain general triangular grids and the application of this multigrid algorithm as a numerically reasonable preconditioner for the lowest-order Raviart-Thomas mixed triangular finite element method. Numerical test results are presented to demonstrate their analytical results and to investigate the applications of this multigrid algorithm on general triangular grids.

  18. A Fast Finite-Difference Time Domain Simulation Method for the Source-Stirring Reverberation Chamber

    Directory of Open Access Journals (Sweden)

    Wenxing Li


    Full Text Available Numerical analysis methods are often employed to improve the efficiency of the design and application of the source-stirring reverberation chamber. However, the state of equilibrium of the field inside the chamber is hard to reach. In this paper, we present a fast simulation method, which is able to significantly decrease the simulation time of the source-stirring reverberation chamber. The mathematical model of this method is given in detail and home-made FDTD code is employed to conduct the simulations and optimizations as well. The results show that the implementation of the method can give us the accurate frequency response of the source-stirring chamber and make the simulation of source-stirring chamber more efficient.

  19. A full-fledged micromagnetic code in less than 70 lines of NumPy

    CERN Document Server

    Abert, Claas; Vogler, Christoph; Windl, Roman; Thanhoffer, Raphael; Suess, Dieter


    We present a complete micromagnetic finite-difference code in less than 70 lines of Python. The code makes largely use of the NumPy library and computes the exchange field by finite differences and the demagnetization field with a fast convolution algorithm. Since the magnetization in finite-difference micromagnetics is represented by a multi-dimensional array and the NumPy library features a rich interface for this data structure, the presented code is a good starting point for the development of novel algorithms.


    Directory of Open Access Journals (Sweden)

    L. S. Santos


    Full Text Available AbstractPultrusion is one of several manufacturing processes for reinforced polymer composites. In this process fibers are continuously pulled through a resin bath and, after impregnation, the fiber-resin assembly is cured in a heated forming die. In order to obtain a polymeric composite with good properties (high and uniform degree of cure and a process with a minimum of wasted energy, an optimization procedure is necessary to calculate the optimal temperature profile. The present work suggests a new strategy to minimize the energy rate taking into account the final quality of the product. For this purpose the particle swarm optimization (PSO algorithm and the computer code DASSL were used to solve the differential algebraic equation that represents the mathematical model. The results of the optimization procedure were compared with results reported in the literature and showed that this strategy may be a good alternative to find the best operational point and to test other heat policies in order to improve the material quality and minimize the energy cost. In addition, the robustness and fast convergence of the algorithm encourage industrial implementation for the inference of the degree of cure and optimization.

  1. Development of a Finite-Difference Time Domain (FDTD) Model for Propagation of Transient Sounds in Very Shallow Water. (United States)

    Sprague, Mark W; Luczkovich, Joseph J


    This finite-difference time domain (FDTD) model for sound propagation in very shallow water uses pressure and velocity grids with both 3-dimensional Cartesian and 2-dimensional cylindrical implementations. Parameters, including water and sediment properties, can vary in each dimension. Steady-state and transient signals from discrete and distributed sources, such as the surface of a vibrating pile, can be used. The cylindrical implementation uses less computation but requires axial symmetry. The Cartesian implementation allows asymmetry. FDTD calculations compare well with those of a split-step parabolic equation. Applications include modeling the propagation of individual fish sounds, fish aggregation sounds, and distributed sources.

  2. An efficient realization of frequency dependent boundary conditions in an acoustic finite-difference time-domain model

    DEFF Research Database (Denmark)

    Escolano-Carrasco, José; Jacobsen, Finn; López, J.J.


    The finite-difference time-domain (FDTD) method provides a simple and accurate way of solving initial boundary value problems. However, most acoustic problems involve frequency dependent boundary conditions, and it is not easy to include such boundary conditions in an FDTD model. Although solutions...... to this problem exist, most of them have high computational costs, and stability cannot always be ensured. In this work, a solution is proposed based on "mixing modelling strategies"; this involves separating the FDTD mesh and the boundary conditions (a digital filter representation of the impedance...


    Directory of Open Access Journals (Sweden)

    Gabbasov Radek Fatykhovich


    It is noteworthy that the algorithm of the analysis is developed with a view to the employment of computer-aided methods and with due account for a substantial number of subsettings. The examples provided in the article are solely designated to illustrate the operation of the proposed algorithm. They demonstrate that even if the number of subsettings is minimal, generalized equations of the method of finite differences are capable of generating the results that make it possible to assess the stress-strained state of a slab.

  4. Development of the software Conden 1.0 in finite differences to model electrostatics problems 2D

    Directory of Open Access Journals (Sweden)

    Wilson Rodríguez Calderón


    Full Text Available The present work consists on the development and implementation of the finite differences method for over-relaxation adapted to irregular meshes to determine the influence of the air frontiers on the potencial values and field electricians, calculated inside a badges parallel condenser, using GID like a pre/post-process platform and Fortran like a programming language of the calculation motor of differences Conden 1.0. The problem domain is constituted by two rectangles that represent the condenser and the air layer that covers it, divided in rectangular meshes no standardize.

  5. Quintic hyperbolic nonpolynomial spline and finite difference method for nonlinear second order differential equations and its application

    Directory of Open Access Journals (Sweden)

    Navnit Jha


    Full Text Available An efficient numerical method based on quintic nonpolynomial spline basis and high order finite difference approximations has been presented. The scheme deals with the space containing hyperbolic and polynomial functions as spline basis. With the help of spline functions we derive consistency conditions and high order discretizations of the differential equation with the significant first order derivative. The error analysis of the new method is discussed briefly. The new method is analyzed for its efficiency using the physical problems. The order and accuracy of the proposed method have been analyzed in terms of maximum errors and root mean square errors.

  6. One-dimensional coupled Burgers’ equation and its numerical solution by an implicit logarithmic finite-difference method

    Directory of Open Access Journals (Sweden)

    Vineet K. Srivastava


    Full Text Available In this paper, an implicit logarithmic finite difference method (I-LFDM is implemented for the numerical solution of one dimensional coupled nonlinear Burgers’ equation. The numerical scheme provides a system of nonlinear difference equations which we linearise using Newton's method. The obtained linear system via Newton's method is solved by Gauss elimination with partial pivoting algorithm. To illustrate the accuracy and reliability of the scheme, three numerical examples are described. The obtained numerical solutions are compared well with the exact solutions and those already available.

  7. Development of the software Conden 1.0 in finite differences to model electrostatics problems 2D

    Directory of Open Access Journals (Sweden)

    Wilson Rodríguez Calderón


    Full Text Available The present work consists on the development and implementation of the finite differences method for over-relaxation adapted to irregular meshes to determine the influence of the air frontiers on the potencial values and field electricians, calculated inside a badges parallel condenser, using GID like a pre/post-process platform and Fortran like a programming language of the calculation motor of differences Conden 1.0. The problem domain is constituted by two rectangles that represent the condenser and the air layer that covers it, divided in rectangular meshes no standardize.

  8. A convergent 2D finite-difference scheme for the Dirac-Poisson system and the simulation of graphene

    KAUST Repository

    Brinkman, Daniel


    We present a convergent finite-difference scheme of second order in both space and time for the 2D electromagnetic Dirac equation. We apply this method in the self-consistent Dirac-Poisson system to the simulation of graphene. The model is justified for low energies, where the particles have wave vectors sufficiently close to the Dirac points. In particular, we demonstrate that our method can be used to calculate solutions of the Dirac-Poisson system where potentials act as beam splitters or Veselago lenses. © 2013 Elsevier Inc.

  9. A Finite Difference, Semi-implicit, Equation-of-State Efficient Algorithm for the Compositional Flow Modeling in the Subsurface: Numerical Examples

    KAUST Repository

    Saavedra, Sebastian


    The mathematical model that has been recognized to have the more accurate approximation to the physical laws govern subsurface hydrocarbon flow in reservoirs is the Compositional Model. The features of this model are adequate to describe not only the performance of a multiphase system but also to represent the transport of chemical species in a porous medium. Its importance relies not only on its current relevance to simulate petroleum extraction processes, such as, Primary, Secondary, and Enhanced Oil Recovery Process (EOR) processes but also, in the recent years, carbon dioxide (CO2) sequestration. The purpose of this study is to investigate the subsurface compositional flow under isothermal conditions for several oil well cases. While simultaneously addressing computational implementation finesses to contribute to the efficiency of the algorithm. This study provides the theoretical framework and computational implementation subtleties of an IMplicit Pressure Explicit Composition (IMPEC)-Volume-balance (VB), two-phase, equation-of-state, approach to model isothermal compositional flow based on the finite difference scheme. The developed model neglects capillary effects and diffusion. From the phase equilibrium premise, the model accounts for volumetric performances of the phases, compressibility of the phases, and composition-dependent viscosities. The Equation of State (EoS) employed to approximate the hydrocarbons behaviour is the Peng Robinson Equation of State (PR-EOS). Various numerical examples were simulated. The numerical results captured the complex physics involved, i.e., compositional, gravitational, phase-splitting, viscosity and relative permeability effects. Regarding the numerical scheme, a phase-volumetric-flux estimation eases the calculation of phase velocities by naturally fitting to phase-upstream-upwinding. And contributes to a faster computation and an efficient programming development.

  10. 3-D Waveguide Effects of Topographical Structural Variation on Full Waveform Propagation: 3-D Finite Difference Modeling Comparisons with Field Data From Yuma Proving Ground, Arizona (United States)

    Anderson, T. S.; Miller, R.; Greenfield, R.; Fisk, D.


    The propagation of seismic waves through regions of complex topography is not thoroughly understood. Surface waves, are of particular interest, as they are large in amplitude and can characterize the source depth, magnitude, and frequency content. The amplitude and frequency content of seismic waves that propagate in regions with large topographical variations are affected by both the scattering and blockage of the wave energy. The ability to predict the 3-d scattering due to topography will improve the understanding of both regional scale surface wave magnitudes, and refine surface wave discriminants as well as at the local scale (Smart Weapons Test Range, Yuma Proving Ground, Arizona. The result of the KGS characterization study is a high-resolution 3-d model that is used in our seismic simulations. The velocities Vs, Vp are calculated by tomography and refraction, attenuation coefficients estimated from the surface wave and from p-waves and are provided in a model with attributes resolved in 3-d to 0.5 meters. In the present work, we present comparisons of synthetic data with seismic data collected at the Smart Weapons Test Range to benchmark the accuracy achieved in simulating 3-d wave propagation in the vicinity of a topographical anomaly (trench). Synthetic seismograms are generated using a 3-d 8th order staggered grid visco-elastic finite difference code that accounts for topography. The geologic model is based on the Yuma site characterization. The size of these calculations required use of the DoD High Performance Computers and parallelized code. Results are compared with field data. Preliminary results show an excellent match with field data using the 3-d fdtd technique.

  11. Pricing derivatives under Lévy models modern finite-difference and pseudo-differential operators approach

    CERN Document Server

    Itkin, Andrey


    This monograph presents a novel numerical approach to solving partial integro-differential equations arising in asset pricing models with jumps, which greatly exceeds the efficiency of existing approaches. The method, based on pseudo-differential operators and several original contributions to the theory of finite-difference schemes, is new as applied to the Lévy processes in finance, and is herein presented for the first time in a single volume. The results within, developed in a series of research papers, are collected and arranged together with the necessary background material from Lévy processes, the modern theory of finite-difference schemes, the theory of M-matrices and EM-matrices, etc., thus forming a self-contained work that gives the reader a smooth introduction to the subject. For readers with no knowledge of finance, a short explanation of the main financial terms and notions used in the book is given in the glossary. The latter part of the book demonstrates the efficacy of the method by solvin...

  12. Model for describing plasmonic nanolasers using Maxwell-Liouville equations with finite-difference time-domain calculations (United States)

    Trivedi, Dhara J.; Wang, Danqing; Odom, Teri W.; Schatz, George C.


    We present a theoretical study of lasing action when plasmonic metallic structures that show lattice plasmon resonances are embedded in a gain medium. Our model combines classical electrodynamics for arrays of gold nanoparticles with a four-level quantum Liouville model of the laser dye photophysics. A numerical solution was implemented using finite-difference time-domain calculations coupled with a finite-difference solution to the Liouville equation. A particular focus of this work is the influence of dephasing in the quantum dynamics on the emission intensity at the threshold for lasing. We find that dephasing in the quantum system leads to reduced lasing emission, but with little effect on the long-term population inversion. Both electronic and vibrational dephasing is considered, but only electronic dephasing is significant, with the fully dephased result appearing for dephasing times comparable to plasmon dephasing (˜10 fs) while fully coherent results involve >100 ps dephasing times as determined by the rate of stimulated emission. There are factor-of-2 differences between the Maxwell-Liouville results (greater emission intensities and narrower widths) compared to the corresponding results of rate-equation models of the dye states, which indicates the importance of using the Maxwell-Liouville approach in modeling these systems. We also examine rate-equation models with and without constraints arising from the Pauli exclusion principle, and we find relatively small effects.

  13. Implementation of a high-order compact finite-difference lattice Boltzmann method in generalized curvilinear coordinates (United States)

    Hejranfar, Kazem; Ezzatneshan, Eslam


    In this work, the implementation of a high-order compact finite-difference lattice Boltzmann method (CFDLBM) is performed in the generalized curvilinear coordinates to improve the computational efficiency of the solution algorithm to handle curved geometries with non-uniform grids. The incompressible form of the discrete Boltzmann equation with the Bhatnagar-Gross-Krook (BGK) approximation with the pressure as the independent dynamic variable is transformed into the generalized curvilinear coordinates. Herein, the spatial derivatives in the resulting lattice Boltzmann (LB) equation in the computational plane are discretized by using the fourth-order compact finite-difference scheme and the temporal term is discretized with the fourth-order Runge-Kutta scheme to provide an accurate and efficient incompressible flow solver. A high-order spectral-type low-pass compact filter is used to regularize the numerical solution and remove spurious waves generated by boundary conditions, flow non-linearities and grid non-uniformity. All boundary conditions are implemented based on the solution of governing equations in the generalized curvilinear coordinates. The accuracy and efficiency of the solution methodology presented are demonstrated by computing different benchmark steady and unsteady incompressible flow problems. A sensitivity study is also conducted to evaluate the effects of grid size and filtering on the accuracy and convergence rate of the solution. Four test cases considered herein for validating the present computations and demonstrating the accuracy and robustness of the solution algorithm are: unsteady Couette flow and steady flow in a 2-D cavity with non-uniform grid and steady and unsteady flows over a circular cylinder and the NACA0012 hydrofoil at different flow conditions. Results obtained for the above test cases are in good agreement with the existing numerical and experimental results. The study shows the present solution methodology based on the

  14. Inverse Interpolation: The Rate of Enzymatic Reaction based Finite differences, Formulas for obtaining intermediate values of Temperature, Substrate Concentration, Enzyme Concentration and their Estimation of Errors


    Nizam Uddin


    Inverse interpolation is the process of finding the values of the argument corresponding to a given value of the function when the latter is intermediate between two tabulated values. The finite differences are differences between the values of the function or the difference between the past differences. Finite differences are forward difference, backward difference and divide difference. Temperature, concentration of substrate, concentration of enzyme and other factors are affected the rate ...

  15. Simulation of coupled flow and mechanical deformation using IMplicit Pressure-Displacement Explicit Saturation (IMPDES) scheme

    KAUST Repository

    El-Amin, Mohamed


    The problem of coupled structural deformation with two-phase flow in porous media is solved numerically using cellcentered finite difference (CCFD) method. In order to solve the system of governed partial differential equations, the implicit pressure explicit saturation (IMPES) scheme that governs flow equations is combined with the the implicit displacement scheme. The combined scheme may be called IMplicit Pressure-Displacement Explicit Saturation (IMPDES). The pressure distribution for each cell along the entire domain is given by the implicit difference equation. Also, the deformation equations are discretized implicitly. Using the obtained pressure, velocity is evaluated explicitly, while, using the upwind scheme, the saturation is obtained explicitly. Moreover, the stability analysis of the present scheme has been introduced and the stability condition is determined.

  16. Finite-Difference Time-Domain Analysis of Twist-Defect-Mode Lasing Dynamics in Cholesteric Photonic Liquid Crystal (United States)

    Matsui, Tatsunosuke; Kitaguchi, Masahiro


    We have numerically investigated lasing dynamics from a twist defect in a cholesteric liquid crystal (CLC) by an auxiliary differential equation finite-difference time-domain (ADE-FDTD) method. As ADEs, the equation of motion of polarization described on the basis of the classical electron oscillator (Lorenz) model and the rate equation in a four-level energy structure are incorporated. A lower lasing threshold has been obtained from the twist-defect mode (TDM) than from band-edge lasing. Standing-wave-like electric fields are strongly localized only in the vicinity where a twist defect is introduced into a CLC, which works as a distributed feedback TDM laser source. The oscillation direction of a standing-wave electric field is not parallel or perpendicular to LC molecules, which is quite different from the bulk CLC case. Our results may be useful for creating more efficient TDM-based CLC lasers.

  17. Simulation of natural convection in an inclined polar cavity using a finite-difference lattice Boltzmann method

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Fan; Yang, Haicheng; Guo, Xueyan; Ren Dai [University of Shanghai for Science and Technology, Shanghai (China); Yan, Yonghua [Shanghai Key Laboratory of Multiphase Flow and Heat Transfer in Power Engineering, Shanghai (China); Liu, Chaoqun [University of Texas at Arlington, Arlington (United States)


    Natural convection heat transfer in an inclined polar cavity was studied using a Finite-difference lattice Boltzmann method (FDLBM) based on a double-population approach for body-fitted coordinates. A D2G9 model coupled with the simplest TD2Q4 lattice model was applied to determine the velocity field and temperature field. For both velocity and temperature fields, the discrete spatial derivatives were obtained by combining the upwind scheme with the central scheme, and the discrete temporal term is obtained using a fourth-order Runge-Kutta scheme. Studies were carried out for different Rayleigh numbers and different inclination angles. The results in terms of streamlines, isotherms, and Nusselt numbers explain the heat transfer mechanism of natural convection in an inclined polar cavity due to the change of Rayleigh number and inclination angle.

  18. A note on the leap-frog scheme in two and three dimensions. [finite difference method for partial differential equations (United States)

    Abarbanel, S.; Gottlieb, D.


    The paper considers the leap-frog finite-difference method (Kreiss and Oliger, 1973) for systems of partial differential equations of the form du/dt = dF/dx + dG/dy + dH/dz, where d denotes partial derivative, u is a q-component vector and a function of x, y, z, and t, and the vectors F, G, and H are functions of u only. The original leap-frog algorithm is shown to admit a modification that improves on the stability conditions for two and three dimensions by factors of 2 and 2.8, respectively, thereby permitting larger time steps. The scheme for three dimensions is considered optimal in the sense that it combines simple averaging and large time steps.

  19. Implementation of Unsplit Perfectly Matched Layer Absorbing Boundary Condition in 3 Dimensional Finite Difference Time Domain Method

    Directory of Open Access Journals (Sweden)

    B. U. Musa


    Full Text Available The C++ programming language was used to implement three-dimensional (3-D finite-difference time-domain (FDTD technique to simulate radiation of high frequency electromagnetic waves in free space. To achieve any meaningful results the computational domain of interest should have to be truncated in some way and this is achieved by applying absorbing boundary conditions. A uniaxial perfectly matched layer (UPML absorbing boundary condition is used in this work. The discretised equations of the UPML in FDTD time stepping scheme were derived and has been successfully implemented using the computer program. Simulation results showed that the UPML behaves as an absorber. This was confirmed by comparing the results with another boundary condition, the Mur ABC.

  20. Linear and non-linear stability analysis for finite difference discretizations of high-order Boussinesq equations

    DEFF Research Database (Denmark)

    Fuhrman, David R.; Bingham, Harry B.; Madsen, Per A.


    This paper considers a method of lines stability analysis for finite difference discretizations of a recently published Boussinesq method for the study of highly non-linear and extremely dispersive water waves. The analysis demonstrates the near-equivalence of classical linear Fourier (von Neumann......) techniques with matrix-based methods for formulations in both one and two horizontal dimensions. The matrix-based method is also extended to show the local de-stabilizing effects of the non-linear terms, as well as the stabilizing effects of numerical dissipation. A comparison of the relative stability...... of rotational and irrotational formulations in two horizontal dimensions provides evidence that the irrotational formulation has significantly better stability properties when the deep-water non-linearity is high, particularly on refined grids. Computation of matrix pseudospectra shows that the system is only...

  1. Analysis of third harmonic generation and four wave mixing in gold nanostructures by nonlinear finite difference time domain. (United States)

    Sasanpour, Pezhman; Shahmansouri, Afsaneh; Rashidian, Bizhan


    Third order nonlinear effects and its enhancement in gold nanostructures has been numerically studied. Analysis method is based on computationally solving nonlinear Maxwell's equations, considering dispersion behavior of permittivity described by Drude model and third order nonlinear susceptibility. Simulation is done by method of nonlinear finite difference time domain method, in which nonlinear equations of electric field are solved by Newton-Raphshon method. As the main outcomes of third order nonlinear susceptibility, four wave mixing and third harmonic generation terms are produced around gold nanostructures. Results of analysis on different geometries and structures show that third order nonlinearity products are more enhanced in places where electric field enhancement is occurred due to surface plasmons. Results indicates that enhancement of nonlinearities is strongly occurred in structures whose interface is dielectric. According to analysis results, nonlinear effects are highly concentrated in the vicinity of nanostructures. Hence this approach can be used in applications where localized ultraviolet light is required.

  2. Combining finite element and finite difference methods for isotropic elastic wave simulations in an energy-conserving manner

    KAUST Repository

    Gao, Longfei


    We consider numerical simulation of the isotropic elastic wave equations arising from seismic applications with non-trivial land topography. The more flexible finite element method is applied to the shallow region of the simulation domain to account for the topography, and combined with the more efficient finite difference method that is applied to the deep region of the simulation domain. We demonstrate that these two discretization methods, albeit starting from different formulations of the elastic wave equation, can be joined together smoothly via weakly imposed interface conditions. Discrete energy analysis is employed to derive the proper interface treatment, leading to an overall discretization that is energy-conserving. Numerical examples are presented to demonstrate the efficacy of the proposed interface treatment.

  3. Sparkling feather reflections of a bird-of-paradise explained by finite-difference time-domain modeling (United States)

    Wilts, Bodo D.; Michielsen, Kristel; De Raedt, Hans; Stavenga, Doekele G.


    Birds-of-paradise are nature’s prime examples of the evolution of color by sexual selection. Their brilliant, structurally colored feathers play a principal role in mating displays. The structural coloration of both the occipital and breast feathers of the bird-of-paradise Lawes’ parotia is produced by melanin rodlets arranged in layers, together acting as interference reflectors. Light reflection by the silvery colored occipital feathers is unidirectional as in a classical multilayer, but the reflection by the richly colored breast feathers is three-directional and extraordinarily complex. Here we show that the reflection properties of both feather types can be quantitatively explained by finite-difference time-domain modeling using realistic feather anatomies and experimentally determined refractive index dispersion values of keratin and melanin. The results elucidate the interplay between avian coloration and vision and indicate tuning of the mating displays to the spectral properties of the avian visual system. PMID:24591592

  4. Investigation of contact acoustic nonlinearity in delaminations by shearographic imaging, laser doppler vibrometric scanning and finite difference modeling. (United States)

    Sarens, Bart; Verstraeten, Bert; Glorieux, Christ; Kalogiannakis, Georgios; Van Hemelrijck, Danny


    Full-field dynamic shearography and laser Doppler vibrometric scanning are used to investigate the local contact acoustic nonlinear generation of delamination-induced effects on the vibration of a harmonically excited composite plate containing an artificial defect. Nonlinear elastic behavior caused by the stress-dependent boundary conditions at the delamination interfaces of a circular defect is also simulated by a 3-D second-order, finite-difference, staggered-grid model (displacement-stress formulation). Both the experimental and simulated data reveal an asymmetric motion of the layer above the delamination, which acts as a membrane vibrating with enhanced displacement amplitude around a finite offset displacement. The spectrum of the membrane motion is enriched with clapping-induced harmonics of the excitation frequency. In case of a sufficiently thin and soft membrane, the simulations reveal clear modal behavior at sub-harmonic frequencies caused by inelastic clapping.

  5. On long-time instabilities in staggered finite difference simulations of the seismic acoustic wave equations on discontinuous grids (United States)

    Gao, Longfei; Ketcheson, David; Keyes, David


    We consider the long-time instability issue associated with finite difference simulation of seismic acoustic wave equations on discontinuous grids. This issue is exhibited by a prototype algebraic problem abstracted from practical application settings. Analysis of this algebraic problem leads to better understanding of the cause of the instability and provides guidance for its treatment. Specifically, we use the concept of discrete energy to derive the proper solution transfer operators and design an effective way to damp the unstable solution modes. Our investigation shows that the interpolation operators need to be matched with their companion restriction operators in order to properly couple the coarse and fine grids. Moreover, to provide effective damping, specially designed diffusive terms are introduced to the equations at designated locations and discretized with specially designed schemes. These techniques are applied to simulations in practical settings and are shown to lead to superior results in terms of both stability and accuracy.

  6. The finite-difference time-domain (FD-TD) method for electromagnetic scattering and interaction problems (United States)

    Taflove, A.; Umashankar, K. R.


    The formulation and recent applications of the finite-difference time-domain (FD-TD) method for the numerical modeling of electromagnetic scattering and interaction problems are considered. It is shown that improvements in FD-TD modeling concepts and software implementation often make it a preferable choice for structures which cannot be easily treated by conventional integral equations and asymptotic approaches. Recent FD-TD modeling validations in research areas including coupling to wires and wire bundles in free space and cavities, scattering from surfaces in relativistic motion, inverse scattering, and radiation condition theory, are reviewed. Finally, the advantages and disadvantages of FD-TD, and guidelines concerning when FD-TD should and should not be used in high-frequency electromagnetic modeling problems, are summarized.

  7. A study of infrasound propagation based on high-order finite difference solutions of the Navier-Stokes equations. (United States)

    Marsden, O; Bogey, C; Bailly, C


    The feasibility of using numerical simulation of fluid dynamics equations for the detailed description of long-range infrasound propagation in the atmosphere is investigated. The two dimensional (2D) Navier Stokes equations are solved via high fidelity spatial finite differences and Runge-Kutta time integration, coupled with a shock-capturing filter procedure allowing large amplitudes to be studied. The accuracy of acoustic prediction over long distances with this approach is first assessed in the linear regime thanks to two test cases featuring an acoustic source placed above a reflective ground in a homogeneous and weakly inhomogeneous medium, solved for a range of grid resolutions. An atmospheric model which can account for realistic features affecting acoustic propagation is then described. A 2D study of the effect of source amplitude on signals recorded at ground level at varying distances from the source is carried out. Modifications both in terms of waveforms and arrival times are described.

  8. A two-dimensional finite-difference solution for the transient thermal behavior of a tubular solar collector (United States)

    Lansing, F. L.


    A numerical procedure was established using the finite-difference technique in the determination of the time-varying temperature distribution of a tubular solar collector under changing solar radiancy and ambient temperature. Three types of spatial discretization processes were considered and compared for their accuracy of computations and for selection of the shortest computer time and cost. The stability criteria of this technique were analyzed in detail to give the critical time increment to ensure stable computations. The results of the numerical analysis were in good agreement with the analytical solution previously reported. The numerical method proved to be a powerful tool in the investigation of the collector sensitivity to two different flow patterns and several flow control mechanisms.

  9. Sparkling feather reflections of a bird-of-paradise explained by finite-difference time-domain modeling. (United States)

    Wilts, Bodo D; Michielsen, Kristel; De Raedt, Hans; Stavenga, Doekele G


    Birds-of-paradise are nature's prime examples of the evolution of color by sexual selection. Their brilliant, structurally colored feathers play a principal role in mating displays. The structural coloration of both the occipital and breast feathers of the bird-of-paradise Lawes' parotia is produced by melanin rodlets arranged in layers, together acting as interference reflectors. Light reflection by the silvery colored occipital feathers is unidirectional as in a classical multilayer, but the reflection by the richly colored breast feathers is three-directional and extraordinarily complex. Here we show that the reflection properties of both feather types can be quantitatively explained by finite-difference time-domain modeling using realistic feather anatomies and experimentally determined refractive index dispersion values of keratin and melanin. The results elucidate the interplay between avian coloration and vision and indicate tuning of the mating displays to the spectral properties of the avian visual system.

  10. Size validity of plasma-metamaterial cloaking monitored by scattering wave in finite-difference time-domain method (United States)

    Bambina, Alexandre; Yamaguchi, Shuhei; Iwai, Akinori; Miyagi, Shigeyuki; Sakai, Osamu


    Limitation of the cloak-size reduction is investigated numerically by a finite-difference time-domain (FDTD) method. A metallic pole that imitates an antenna is cloaked with an anisotropic and parameter-gradient medium against electromagnetic-wave propagation in microwave range. The cloaking structure is a metamaterial submerged in a plasma confined in a vacuum chamber made of glass. The smooth-permittivity plasma can be compressed in the radial direction, which enables us to decrease the size of the cloak. Theoretical analysis is performed numerically by comparing scattering waves in various cases; there exists a high reduction of the scattering wave when the radius of the cloak is larger than a quarter of one wavelength. This result indicates that the required size of the cloaking layer is more than an object scale in the Rayleigh scattering regime.

  11. Finite difference/spectral approximations for the distributed order time fractional reaction-diffusion equation on an unbounded domain (United States)

    Chen, Hu; Lü, Shujuan; Chen, Wenping


    The numerical approximation of the distributed order time fractional reaction-diffusion equation on a semi-infinite spatial domain is discussed in this paper. A fully discrete scheme based on finite difference method in time and spectral approximation using Laguerre functions in space is proposed. The scheme is unconditionally stable and convergent with order O (τ2 + Δα2 +N (1 - m) / 2), where τ, Δα, N, and m are the time-step size, step size in distributed-order variable, polynomial degree, and regularity in the space variable of the exact solution, respectively. A pseudospectral scheme is also proposed and analyzed. Some numerical examples are presented to demonstrate the efficiency of the proposed scheme.

  12. Solving the nonlinear Schrödinger equation using cubic B-spline interpolation and finite difference methods (United States)

    Ahmad, Azhar; Azmi, Amirah; Majid, Ahmad Abd.; Hamid, Nur Nadiah Abd


    In this paper, Nonlinear Schrödinger (NLS) equation with Neumann boundary conditions is solved using finite difference method (FDM) and cubic B-spline interpolation method (CuBSIM). First, the approach is based on the FDM applied on the time and space discretization with the help of theta-weighted method. However, our main interest is the second approach, whereby FDM is applied on the time discretization and cubic B-spline is utilized as an interpolation function in the space dimension with the same help of theta-weighted method. The CuBSIM is shown to be stable by using von Neumann stability analysis. The proposed method is tested on a test problem with single soliton motion of the NLS equation. The accuracy of the numerical results is measured by the Euclidean-norm and infinity-norm. CuBSIM is found to produce more accurate results than the FDM.

  13. A Finite Difference Solution of a Simply Supported Beam of Orthotropic Composite Materials Using Displacement Potential Formulation

    Directory of Open Access Journals (Sweden)

    S. K. Deb Nath


    Full Text Available Here an efficient displacement potential formulation based finite difference technique is used to solve the elastic field of a simply supported beam of orthotropic composite materials. A simply supported beam made of orthotropic composite material under uniformly distributed loading is considered and its elastic behaviors under such loading conditions are analyzed considering plane stress condition. The solutions of the problem satisfy the force equilibrium conditions as well as boundary conditions. For understanding the elastic behavior of a simply supported beam, the displacement and stress components of some important sections of the beam are shown graphically. Effects of different orthotropic composite materials on the solutions are also analyzed. Besides, at a particular section of the beam, the comparative analysis of the elastic field is carried out by using the FDM and FEM methods.

  14. Estimation of State of Charge for Lithium-Ion Battery Based on Finite Difference Extended Kalman Filter

    Directory of Open Access Journals (Sweden)

    Ze Cheng


    Full Text Available An accurate estimation of the state of charge (SOC of the battery is of great significance for safe and efficient energy utilization of electric vehicles. Given the nonlinear dynamic system of the lithium-ion battery, the parameters of the second-order RC equivalent circuit model were calibrated and optimized using a nonlinear least squares algorithm in the Simulink parameter estimation toolbox. A comparison was made between this finite difference extended Kalman filter (FDEKF and the standard extended Kalman filter in the SOC estimation. The results show that the model can essentially predict the dynamic voltage behavior of the lithium-ion battery, and the FDEKF algorithm can maintain good accuracy in the estimation process and has strong robustness against modeling error.

  15. On Long-Time Instabilities in Staggered Finite Difference Simulations of the Seismic Acoustic Wave Equations on Discontinuous Grids

    KAUST Repository

    Gao, Longfei


    We consider the long-time instability issue associated with finite difference simulation of seismic acoustic wave equations on discontinuous grids. This issue is exhibited by a prototype algebraic problem abstracted from practical application settings. Analysis of this algebraic problem leads to better understanding of the cause of the instability and provides guidance for its treatment. Specifically, we use the concept of discrete energy to derive the proper solution transfer operators and design an effective way to damp the unstable solution modes. Our investigation shows that the interpolation operators need to be matched with their companion restriction operators in order to properly couple the coarse and fine grids. Moreover, to provide effective damping, specially designed diffusive terms are introduced to the equations at designated locations and discretized with specially designed schemes. These techniques are applied to simulations in practical settings and are shown to lead to superior results in terms of both stability and accuracy.

  16. A Fast O(N log N Finite Difference Method for the One-Dimensional Space-Fractional Diffusion Equation

    Directory of Open Access Journals (Sweden)

    Treena Basu


    Full Text Available This paper proposes an approach for the space-fractional diffusion equation in one dimension. Since fractional differential operators are non-local, two main difficulties arise after discretization and solving using Gaussian elimination: how to handle the memory requirement of O(N2 for storing the dense or even full matrices that arise from application of numerical methods and how to manage the significant computational work count of O(N3 per time step, where N is the number of spatial grid points. In this paper, a fast iterative finite difference method is developed, which has a memory requirement of O(N and a computational cost of O(N logN per iteration. Finally, some numerical results are shown to verify the accuracy and efficiency of the new method.

  17. Performance Improvements for Coarse Mesh Finite Difference Acceleration L3:RTM.PRT.P13.02

    Energy Technology Data Exchange (ETDEWEB)

    Collins, Benjamin S. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Hamilton, Steven P. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Stimpson, Shane [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Yee, Ben [Univ. of Michigan, Ann Arbor, MI (United States); Larsen, Edward W. [Univ. of Michigan, Ann Arbor, MI (United States); Kochunas, Brendan [Univ. of Michigan, Ann Arbor, MI (United States)


    The development of VERA-CS in recent years has focused on developing the capability to simulate multiple cycles of operating commercial nuclear power plants. Now that these capabilities have advanced to the point where it is being deployed to users, the focus is on improving the computational performance of various components in VERA-CS. In this work, the focus is on the Coarse Mesh Finite Difference (CMFD) solution in MPACT. CMFD serves multiple purposes in the 2D/1D solution methodology. First, it is a natural mechanism to tie together the radial MOC transport and the axial SP3 solution. Because the CMFD system solves the multigroup three-dimensional core in one system, it pulls together the global response of the system. In addition, the CMFD solution provides a framework to accelerate the convergence of the eigenvalue problem.

  18. Finite-Difference Time-Domain Simulation of Light Propagation in 2D Periodic and Quasi-Periodic Photonic Structures

    Directory of Open Access Journals (Sweden)

    N. Dadashzadeh


    Full Text Available Ultra-short pulse is a promising technology for achieving ultra-high data rate transmission which is required to follow the increased demand of data transport over an optical communication system. Therefore, the propagation of such type of pulses and the effects that it may suffer during its transmission through an optical waveguide has received a great deal of attention in the recent years. We provide an overview of recent theoretical developments in a numerical modeling of Maxwell's equations to analyze the propagation of short laser pulses in photonic structures. The process of short light pulse propagation through 2D periodic and quasi-periodic photonic structures is simulated based on Finite-Difference Time-Domain calculations of Maxwell’s equations.

  19. Tomographic reconstruction of melanin structures of optical coherence tomography via the finite-difference time-domain simulation (United States)

    Huang, Shi-Hao; Wang, Shiang-Jiu; Tseng, Snow H.


    Optical coherence tomography (OCT) provides high resolution, cross-sectional image of internal microstructure of biological tissue. We use the Finite-Difference Time-Domain method (FDTD) to analyze the data acquired by OCT, which can help us reconstruct the refractive index of the biological tissue. We calculate the refractive index tomography and try to match the simulation with the data acquired by OCT. Specifically, we try to reconstruct the structure of melanin, which has complex refractive indices and is the key component of human pigment system. The results indicate that better reconstruction can be achieved for homogenous sample, whereas the reconstruction is degraded for samples with fine structure or with complex interface. Simulation reconstruction shows structures of the Melanin that may be useful for biomedical optics applications.

  20. Full-Wave Analysis of Traveling-Wave Field-Effect Transistors Using Finite-Difference Time-Domain Method

    Directory of Open Access Journals (Sweden)

    Koichi Narahara


    Full Text Available Nonlinear transmission lines, which define transmission lines periodically loaded with nonlinear devices such as varactors, diodes, and transistors, are modeled in the framework of finite-difference time-domain (FDTD method. Originally, some root-finding routine is needed to evaluate the contributions of nonlinear device currents appropriately to the temporally advanced electrical fields. Arbitrary nonlinear transmission lines contain large amount of nonlinear devices; therefore, it costs too much time to complete calculations. To reduce the calculation time, we recently developed a simple model of diodes to eliminate root-finding routines in an FDTD solver. Approximating the diode current-voltage relation by a piecewise-linear function, an extended Ampere's law is solved in a closed form for the time-advanced electrical fields. In this paper, we newly develop an FDTD model of field-effect transistors (FETs, together with several numerical examples that demonstrate pulse-shortening phenomena in a traveling-wave FET.

  1. Seismic modeling with radial basis function-generated finite differences (RBF-FD) – a simplified treatment of interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Martin, Bradley, E-mail:; Fornberg, Bengt, E-mail:


    In a previous study of seismic modeling with radial basis function-generated finite differences (RBF-FD), we outlined a numerical method for solving 2-D wave equations in domains with material interfaces between different regions. The method was applicable on a mesh-free set of data nodes. It included all information about interfaces within the weights of the stencils (allowing the use of traditional time integrators), and was shown to solve problems of the 2-D elastic wave equation to 3rd-order accuracy. In the present paper, we discuss a refinement of that method that makes it simpler to implement. It can also improve accuracy for the case of smoothly-variable model parameter values near interfaces. We give several test cases that demonstrate the method solving 2-D elastic wave equation problems to 4th-order accuracy, even in the presence of smoothly-curved interfaces with jump discontinuities in the model parameters.

  2. Seismic modeling with radial basis function-generated finite differences (RBF-FD) - a simplified treatment of interfaces (United States)

    Martin, Bradley; Fornberg, Bengt


    In a previous study of seismic modeling with radial basis function-generated finite differences (RBF-FD), we outlined a numerical method for solving 2-D wave equations in domains with material interfaces between different regions. The method was applicable on a mesh-free set of data nodes. It included all information about interfaces within the weights of the stencils (allowing the use of traditional time integrators), and was shown to solve problems of the 2-D elastic wave equation to 3rd-order accuracy. In the present paper, we discuss a refinement of that method that makes it simpler to implement. It can also improve accuracy for the case of smoothly-variable model parameter values near interfaces. We give several test cases that demonstrate the method solving 2-D elastic wave equation problems to 4th-order accuracy, even in the presence of smoothly-curved interfaces with jump discontinuities in the model parameters.

  3. A Radial Basis Function (RBF)-Finite Difference (FD) Method for Diffusion and Reaction-Diffusion Equations on Surfaces. (United States)

    Shankar, Varun; Wright, Grady B; Kirby, Robert M; Fogelson, Aaron L


    In this paper, we present a method based on Radial Basis Function (RBF)-generated Finite Differences (FD) for numerically solving diffusion and reaction-diffusion equations (PDEs) on closed surfaces embedded in ℝ d . Our method uses a method-of-lines formulation, in which surface derivatives that appear in the PDEs are approximated locally using RBF interpolation. The method requires only scattered nodes representing the surface and normal vectors at those scattered nodes. All computations use only extrinsic coordinates, thereby avoiding coordinate distortions and singularities. We also present an optimization procedure that allows for the stabilization of the discrete differential operators generated by our RBF-FD method by selecting shape parameters for each stencil that correspond to a global target condition number. We show the convergence of our method on two surfaces for different stencil sizes, and present applications to nonlinear PDEs simulated both on implicit/parametric surfaces and more general surfaces represented by point clouds.

  4. Extrapolated stabilized explicit Runge-Kutta methods (United States)

    Martín-Vaquero, J.; Kleefeld, B.


    Extrapolated Stabilized Explicit Runge-Kutta methods (ESERK) are proposed to solve multi-dimensional nonlinear partial differential equations (PDEs). In such methods it is necessary to evaluate the function nt times per step, but the stability region is O (nt2). Hence, the computational cost is O (nt) times lower than for a traditional explicit algorithm. In that way stiff problems can be integrated by the use of simple explicit evaluations in which case implicit methods usually had to be used. Therefore, they are especially well-suited for the method of lines (MOL) discretizations of parabolic nonlinear multi-dimensional PDEs. In this work, first s-stages first-order methods with extended stability along the negative real axis are obtained. They have slightly shorter stability regions than other traditional first-order stabilized explicit Runge-Kutta algorithms (also called Runge-Kutta-Chebyshev codes). Later, they are used to derive nt-stages second- and fourth-order schemes using Richardson extrapolation. The stability regions of these fourth-order codes include the interval [ - 0.01nt2, 0 ] (nt being the number of total functions evaluations), which are shorter than stability regions of ROCK4 methods, for example. However, the new algorithms neither suffer from propagation of errors (as other Runge-Kutta-Chebyshev codes as ROCK4 or DUMKA) nor internal instabilities. Additionally, many other types of higher-order (and also lower-order) methods can be obtained easily in a similar way. These methods also allow adaptation of the length step with no extra cost. Hence, the stability domain is adapted precisely to the spectrum of the problem at the current time of integration in an optimal way, i.e., with minimal number of additional stages. We compare the new techniques with other well-known algorithms with good results in very stiff diffusion or reaction-diffusion multi-dimensional nonlinear equations.

  5. Making the Tacit Explicit

    DEFF Research Database (Denmark)

    Blasco, Maribel


    The article proposes an approach, broadly inspired by culturally inclusive pedagogy, to facilitate international student academic adaptation based on rendering tacit aspects of local learning cultures explicit to international full degree students, rather than adapting them. Preliminary findings...... are presented from a focus group-based exploratory study of international student experiences at different stages of their studies at a Danish business school, one of Denmark’s most international universities. The data show how a major source of confusion for these students has to do with the tacit logics...... and expectations that shape how the formal steps of the learning cycle are understood and enacted locally, notably how learning and assessment moments are defined and related to one another. Theoretically, the article draws on tacit knowledge and sense-making theories to analyse student narratives...

  6. An efficient finite differences method for the computation of compressible, subsonic, unsteady flows past airfoils and panels (United States)

    Colera, Manuel; Pérez-Saborid, Miguel


    A finite differences scheme is proposed in this work to compute in the time domain the compressible, subsonic, unsteady flow past an aerodynamic airfoil using the linearized potential theory. It improves and extends the original method proposed in this journal by Hariharan, Ping and Scott [1] by considering: (i) a non-uniform mesh, (ii) an implicit time integration algorithm, (iii) a vectorized implementation and (iv) the coupled airfoil dynamics and fluid dynamic loads. First, we have formulated the method for cases in which the airfoil motion is given. The scheme has been tested on well known problems in unsteady aerodynamics -such as the response to a sudden change of the angle of attack and to a harmonic motion of the airfoil- and has been proved to be more accurate and efficient than other finite differences and vortex-lattice methods found in the literature. Secondly, we have coupled our method to the equations governing the airfoil dynamics in order to numerically solve problems where the airfoil motion is unknown a priori as happens, for example, in the cases of the flutter and the divergence of a typical section of a wing or of a flexible panel. Apparently, this is the first self-consistent and easy-to-implement numerical analysis in the time domain of the compressible, linearized coupled dynamics of the (generally flexible) airfoil-fluid system carried out in the literature. The results for the particular case of a rigid airfoil show excellent agreement with those reported by other authors, whereas those obtained for the case of a cantilevered flexible airfoil in compressible flow seem to be original or, at least, not well-known.

  7. A Matlab-based finite-difference solver for the Poisson problem with mixed Dirichlet-Neumann boundary conditions (United States)

    Reimer, Ashton S.; Cheviakov, Alexei F.


    A Matlab-based finite-difference numerical solver for the Poisson equation for a rectangle and a disk in two dimensions, and a spherical domain in three dimensions, is presented. The solver is optimized for handling an arbitrary combination of Dirichlet and Neumann boundary conditions, and allows for full user control of mesh refinement. The solver routines utilize effective and parallelized sparse vector and matrix operations. Computations exhibit high speeds, numerical stability with respect to mesh size and mesh refinement, and acceptable error values even on desktop computers. Catalogue identifier: AENQ_v1_0 Program summary URL: Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: GNU General Public License v3.0 No. of lines in distributed program, including test data, etc.: 102793 No. of bytes in distributed program, including test data, etc.: 369378 Distribution format: tar.gz Programming language: Matlab 2010a. Computer: PC, Macintosh. Operating system: Windows, OSX, Linux. RAM: 8 GB (8, 589, 934, 592 bytes) Classification: 4.3. Nature of problem: To solve the Poisson problem in a standard domain with “patchy surface”-type (strongly heterogeneous) Neumann/Dirichlet boundary conditions. Solution method: Finite difference with mesh refinement. Restrictions: Spherical domain in 3D; rectangular domain or a disk in 2D. Unusual features: Choice between mldivide/iterative solver for the solution of large system of linear algebraic equations that arise. Full user control of Neumann/Dirichlet boundary conditions and mesh refinement. Running time: Depending on the number of points taken and the geometry of the domain, the routine may take from less than a second to several hours to execute.

  8. Development of an explicit non-staggered scheme for solving three-dimensional Maxwell's equations (United States)

    Sheu, Tony W. H.; Chung, Y. W.; Li, J. H.; Wang, Y. C.


    An explicit finite-difference scheme for solving the three-dimensional Maxwell's equations in non-staggered grids is presented. We aspire to obtain time-dependent solutions of the Faraday's and Ampère's equations and predict the electric and magnetic fields within the discrete zero-divergence context (or Gauss's law). The local conservation laws in Maxwell's equations are numerically preserved using the explicit second-order accurate symplectic partitioned Runge-Kutta temporal scheme. Following the method of lines, the spatial derivative terms in the semi-discretized Faraday's and Ampère's equations are approximated theoretically to obtain a highly accurate numerical phase velocity. The proposed fourth-order accurate space-centered finite difference scheme minimizes the discrepancy between the exact and numerical phase velocities. This minimization process considerably reduces the dispersion and anisotropy errors normally associated with finite difference time-domain methods. The computational efficiency of getting the same level of accuracy at less computing time and the ability of preserving the symplectic property have been numerically demonstrated through several test problems.

  9. Numerical solver for first-principles transport calculation based on real-space finite-difference method (United States)

    Iwase, Shigeru; Hoshi, Takeo; Ono, Tomoya


    We propose an efficient procedure to obtain Green's functions by combining the shifted conjugate orthogonal conjugate gradient (shifted COCG) method with the nonequilibrium Green's function (NEGF) method based on a real-space finite-difference (RSFD) approach. The bottleneck of the computation in the NEGF scheme is matrix inversion of the Hamiltonian including the self-energy terms of electrodes to obtain the perturbed Green's function in the transition region. This procedure first computes unperturbed Green's functions and calculates perturbed Green's functions from the unperturbed ones using a mathematically strict relation. Since the matrices to be inverted to obtain the unperturbed Green's functions are sparse, complex-symmetric, and shifted for a given set of sampling energy points, we can use the shifted COCG method, in which once the Green's function for a reference energy point has been calculated the Green's functions for the other energy points can be obtained with a moderate computational cost. We calculate the transport properties of a C60@(10,10) carbon nanotube (CNT) peapod suspended by (10,10)CNTs as an example of a large-scale transport calculation. The proposed scheme opens the possibility of performing large-scale RSFD-NEGF transport calculations using massively parallel computers without the loss of accuracy originating from the incompleteness of the localized basis set.

  10. Investigation of graphene-on-metal substrates for SPR-based sensor using finite-difference time domain. (United States)

    Said, Fairus Atida; Menon, Pulliyaseri Susthitha; Rajendran, Venkatachalam; Shaari, Sahbudin; Majlis, Burhanuddin Y


    In this study, the authors investigated the effects of a single layer graphene as a coating layer on top of metal thin films such as silver, gold, aluminum and copper using finite-difference time domain method. To enhance the resolution of surface plasmon resonance (SPR) sensor, it is necessary to increase the SPR reflectivity and decrease the full-width-half maximum (FWHM) of the SPR curve so that there is minimum uncertainty in the determination of the resonance dip. Numerical data was verified with analytical and experimental data where all the data were in good agreement with resonance angle differing in <10% due to noise present in components such as humidity and temperature. In further analysis, reflectivity and FWHM were compared among four types of metal with various thin film thicknesses where graphene was applied on top of the metal layers, and data was compared against pure conventional metal thin films. A 60 nm-thick Au thin film results in higher performance with reflectivity of 92.4% and FWHM of 0.88° whereas single layer graphene-on-60 nm-thick Au gave reflectivity of 91.7% and FWHM of 1.32°. However, a graphene-on-40 nm-thick Ag also gave good performance with narrower FWHM of 0.88° and reflection spectra of 89.2%.

  11. A two dimensional finite difference time domain analysis of the quiet zone fields of an anechoic chamber (United States)

    Ryan, Deirdre A.; Luebbers, Raymond J.; Nguyen, Truong X.; Kunz, Karl S.; Steich, David J.


    Prediction of anechoic chamber performance is a difficult problem. Electromagnetic anechoic chambers exist for a wide range of frequencies but are typically very large when measured in wavelengths. Three dimensional finite difference time domain (FDTD) modeling of anechoic chambers is possible with current computers but at frequencies lower than most chamber design frequencies. However, two dimensional FDTD (2D-FTD) modeling enables much greater detail at higher frequencies and offers significant insight into compact anechoic chamber design and performance. A major subsystem of an anechoic chamber for which computational electromagnetic analyses exist is the reflector. First, an analysis of the quiet zone fields of a low frequency anechoic chamber produced by a uniform source and a reflector in two dimensions using the FDTD method is presented. The 2D-FDTD results are compared with results from a three dimensional corrected physical optics calculation and show good agreement. Next, a directional source is substituted for the uniform radiator. Finally, a two dimensional anechoic chamber geometry, including absorbing materials, is considered, and the 2D-FDTD results for these geometries appear reasonable.

  12. Finite-difference analysis of plasmon-induced forces of metal nano-clusters by the Lorentz force formulation. (United States)

    Fujii, Masafumi


    We analyze light-induced forces on metal nano-spheres by using the three-dimensional finite-difference time-domain method with the Lorentz force formulation. Convergent analysis of the force on metal nano-particle clusters has been achieved by integrating the Lorentz and the Coulomb forces over the volume of the metal particles. Comparison to the Mie theory of radiation pressure on metal spheres under a plane wave illumination has verified rigorously the accuracy of the numerical method. We also analyze separate two metal spheres in close proximity and the results of the induced forces are compared to those in previous publications. The present method allows analysis of forces on various irregular structures; we apply the method to touching metal spheres, forming a simple cluster with a slight deformation at the contact point, to analyze the forces induced by the plasmonic resonance of the clusters. We show that the fundamental resonance modes, which newly appear in an infrared range when spheres are touching, exhibit strong binding forces within the clusters. Based on the numerical analyses we identify the resonance modes and evaluate quantitatively the infrared-induced forces on metal nano-sphere clusters.

  13. A generalized volumetric dispersion model for a class of two-phase separation/reaction: finite difference solutions (United States)

    Siripatana, Chairat; Thongpan, Hathaikarn; Promraksa, Arwut


    This article explores a volumetric approach in formulating differential equations for a class of engineering flow problems involving component transfer within or between two phases. In contrast to conventional formulation which is based on linear velocities, this work proposed a slightly different approach based on volumetric flow-rate which is essentially constant in many industrial processes. In effect, many multi-dimensional flow problems found industrially can be simplified into multi-component or multi-phase but one-dimensional flow problems. The formulation is largely generic, covering counter-current, concurrent or batch, fixed and fluidized bed arrangement. It was also intended to use for start-up, shut-down, control and steady state simulation. Since many realistic and industrial operation are dynamic with variable velocity and porosity in relation to position, analytical solutions are rare and limited to only very simple cases. Thus we also provide a numerical solution using Crank-Nicolson finite difference scheme. This solution is inherently stable as tested against a few cases published in the literature. However, it is anticipated that, for unconfined flow or non-constant flow-rate, traditional formulation should be applied.

  14. Computable error estimates of a finite difference scheme for option pricing in exponential Lévy models

    KAUST Repository

    Kiessling, Jonas


    Option prices in exponential Lévy models solve certain partial integro-differential equations. This work focuses on developing novel, computable error approximations for a finite difference scheme that is suitable for solving such PIDEs. The scheme was introduced in (Cont and Voltchkova, SIAM J. Numer. Anal. 43(4):1596-1626, 2005). The main results of this work are new estimates of the dominating error terms, namely the time and space discretisation errors. In addition, the leading order terms of the error estimates are determined in a form that is more amenable to computations. The payoff is only assumed to satisfy an exponential growth condition, it is not assumed to be Lipschitz continuous as in previous works. If the underlying Lévy process has infinite jump activity, then the jumps smaller than some (Formula presented.) are approximated by diffusion. The resulting diffusion approximation error is also estimated, with leading order term in computable form, as well as the dependence of the time and space discretisation errors on this approximation. Consequently, it is possible to determine how to jointly choose the space and time grid sizes and the cut off parameter (Formula presented.). © 2014 Springer Science+Business Media Dordrecht.

  15. Experimental validation of a finite-difference model for the prediction of transcranial ultrasound fields based on CT images (United States)

    Bouchoux, Guillaume; Bader, Kenneth B.; Korfhagen, Joseph J.; Raymond, Jason L.; Shivashankar, Ravishankar; Abruzzo, Todd A.; Holland, Christy K.


    The prevalence of stroke worldwide and the paucity of effective therapies have triggered interest in the use of transcranial ultrasound as an adjuvant to thrombolytic therapy. Previous studies have shown that 120 kHz ultrasound enhanced thrombolysis and allowed efficient penetration through the temporal bone. The objective of our study was to develop an accurate finite-difference model of acoustic propagation through the skull based on computed tomography (CT) images. The computational approach, which neglected shear waves, was compared with a simple analytical model including shear waves. Acoustic pressure fields from a two-element annular array (120 and 60 kHz) were acquired in vitro in four human skulls. Simulations were performed using registered CT scans and a source term determined by acoustic holography. Mean errors below 14% were found between simulated pressure fields and corresponding measurements. Intracranial peak pressures were systematically underestimated and reflections from the contralateral bone were overestimated. Determination of the acoustic impedance of the bone from the CT images was the likely source of error. High correlation between predictions and measurements (R2 = 0.93 and R2 = 0.88 for transmitted and reflected waves amplitude, respectively) demonstrated that this model is suitable for a quantitative estimation of acoustic fields generated during 40-200 kHz ultrasound-enhanced ischemic stroke treatment.

  16. Finite-Difference Modeling of Acoustic and Gravity Wave Propagation in Mars Atmosphere: Application to Infrasounds Emitted by Meteor Impacts (United States)

    Garcia, Raphael F.; Brissaud, Quentin; Rolland, Lucie; Martin, Roland; Komatitsch, Dimitri; Spiga, Aymeric; Lognonné, Philippe; Banerdt, Bruce


    The propagation of acoustic and gravity waves in planetary atmospheres is strongly dependent on both wind conditions and attenuation properties. This study presents a finite-difference modeling tool tailored for acoustic-gravity wave applications that takes into account the effect of background winds, attenuation phenomena (including relaxation effects specific to carbon dioxide atmospheres) and wave amplification by exponential density decrease with height. The simulation tool is implemented in 2D Cartesian coordinates and first validated by comparison with analytical solutions for benchmark problems. It is then applied to surface explosions simulating meteor impacts on Mars in various Martian atmospheric conditions inferred from global climate models. The acoustic wave travel times are validated by comparison with 2D ray tracing in a windy atmosphere. Our simulations predict that acoustic waves generated by impacts can refract back to the surface on wind ducts at high altitude. In addition, due to the strong nighttime near-surface temperature gradient on Mars, the acoustic waves are trapped in a waveguide close to the surface, which allows a night-side detection of impacts at large distances in Mars plains. Such theoretical predictions are directly applicable to future measurements by the INSIGHT NASA Discovery mission.

  17. An efficient hybrid pseudospectral/finite-difference scheme for solving the TTI pure P-wave equation

    KAUST Repository

    Zhan, Ge


    The pure P-wave equation for modelling and migration in tilted transversely isotropic (TTI) media has attracted more and more attention in imaging seismic data with anisotropy. The desirable feature is that it is absolutely free of shear-wave artefacts and the consequent alleviation of numerical instabilities generally suffered by some systems of coupled equations. However, due to several forward-backward Fourier transforms in wavefield updating at each time step, the computational cost is significant, and thereby hampers its prevalence. We propose to use a hybrid pseudospectral (PS) and finite-difference (FD) scheme to solve the pure P-wave equation. In the hybrid solution, most of the cost-consuming wavenumber terms in the equation are replaced by inexpensive FD operators, which in turn accelerates the computation and reduces the computational cost. To demonstrate the benefit in cost saving of the new scheme, 2D and 3D reverse-time migration (RTM) examples using the hybrid solution to the pure P-wave equation are carried out, and respective runtimes are listed and compared. Numerical results show that the hybrid strategy demands less computation time and is faster than using the PS method alone. Furthermore, this new TTI RTM algorithm with the hybrid method is computationally less expensive than that with the FD solution to conventional TTI coupled equations. © 2013 Sinopec Geophysical Research Institute.

  18. Finite Difference Energy Method for nonlinear numerical analysis of reinforced concrete slab using simplified isotropic damage model

    Directory of Open Access Journals (Sweden)

    M. V. A. Lima

    Full Text Available This work presents a model to predict the flexural behavior of reinforced concrete slabs, combining the Mazars damage model for simulation of the loss of stiffness of the concrete during the cracking process and the Classical Theory of Laminates, to govern the bending of the structural element. A variational formulation based on the principle of virtual work was developed for the model, and then treated numerically according to the Finite Difference Energy Method, with the end result a program developed in Fortran. To validate the model thus proposed have been simulated with the program, some cases of slabs in flexure in the literature. The evaluation of the results obtained in this study demonstrated the capability of the model, in view of the good predictability of the behavior of slabs in flexure, sweeping the path of equilibrium to the rupture of the structural element. Besides the satisfactory prediction of the behavior observed as positive aspects of the model to its relative simplicity and reduced number of experimental parameters necessary for modeling.

  19. Convergence and precision characteristics of finite difference time domain method for the analysis of spectroscopic ellipsometry data at oblique incidence (United States)

    Foo, Yishu; Zapien, Juan Antonio


    The finite difference time domain (FDTD) method presents attractive advantages for analysis of the spectroscopic ellipsometry (SE) response of complex, non-planar samples including generality and suitability to address complex structures as well as non-linear effects and/or non-periodic morphologies. However, it is imperative to advance our understanding, and more importantly, to design strategies to improve the computational time of FDTD method calculations. In a previous report we show the ability to simulate the SE response of prototypical samples based on far-field projections of near-field simulation based on the FDTD method with accuracy equivalent to ∼0.5 monolayer precision in film thickness up to 70° angle of incidence (AoI). In this contribution, we provide a refined strategy that results in ∼3 orders of magnitude improvement in the determination of the SE data as estimated by the χ2 figure of merit for modeling of SE data at angles as large as 80° AoI with respect to the standard solution. Significantly the proposed strategy also provides improvement in the computation time that speeds up by a factor ∼4× at 70° AoI but that can be as large as ∼20× for 40° AoI.

  20. Numerical solution of the state-delayed optimal control problems by a fast and accurate finite difference θ-method (United States)

    Hajipour, Mojtaba; Jajarmi, Amin


    Using the Pontryagin's maximum principle for a time-delayed optimal control problem results in a system of coupled two-point boundary-value problems (BVPs) involving both time-advance and time-delay arguments. The analytical solution of this advance-delay two-point BVP is extremely difficult, if not impossible. This paper provides a discrete general form of the numerical solution for the derived advance-delay system by applying a finite difference θ-method. This method is also implemented for the infinite-time horizon time-delayed optimal control problems by using a piecewise version of the θ-method. A matrix formulation and the error analysis of the suggested technique are provided. The new scheme is accurate, fast and very effective for the optimal control of linear and nonlinear time-delay systems. Various types of finite- and infinite-time horizon problems are included to demonstrate the accuracy, validity and applicability of the new technique.

  1. A fourth order accuracy summation-by-parts finite difference scheme for acoustic reverse time migration in boundary-conforming grids (United States)

    Wang, Ying; Zhou, Hui; Yuan, Sanyi; Ye, Yameng


    The fourth order accuracy finite difference scheme is known advantageous in reducing memory and improving efficiency. Summation-by-parts finite difference operator is a natural way for wavefield simulation in complicated domains containing surface topography and irregular interfaces. The application of summation-by-parts method guarantees the stability of numerical approximation for heterogeneous media on curvilinear grids. This paper extends the second order summation-by-parts finite difference method to the fourth order case for the discretization of acoustic wave equation and perfect matched layer in boundary-conforming grids. In particular, the implementation of the fourth order method for wavefield simulation and reverse time migration in complicated domains can significantly improve the efficiency and decrease the storage. The elliptic method is applied for boundary-conforming grid generation in complicated domains. Under such grids, the two-dimensional acoustic wave equation in second order displacement formulation is compactly reformulated for forward modeling and reverse time migration, and the symmetric and compact form of perfectly matched layers expressed in a curvilinear coordinate system are applied to suppress artificial reflections. The discretizations of the acoustic wave equation and perfectly matched layer formula are fourth and second order accuracy in space and time respectively, where the spatial discretization satisfies the principle of summation-by-parts and is stable. Numerical experiments are presented to compare the accuracy of the second with fourth order summation-by-parts finite difference methods and to evaluate the efficiency of reverse time migration by using these two methods. As well, comparisons are performed between the fourth order accuracy summation-by-parts finite difference method and central finite difference method to illustrate the stability superiority of summation-by-parts operators.

  2. Application of steady state finite element and transient finite difference theory to sound propagation in a variable area duct: A comparison with experiment (United States)

    Baumeister, K. J.; Eversman, W.; Astley, R. J.; White, J. W.


    Sound propagation without flow in a rectangular duct with a converging-diverging area variation was studied experimentally and theoretically. The area variation was of sufficient magnitude to produce large reflections and induce modal scattering. The rms (root-mean-squared) pressure and phase angle on both the flat and curved surface were measured and tabulated. The steady state finite element theory and the transient finite difference theory are in good agreement with the data. It is concluded that numerical finite difference and finite element theories appear ideally suited for handling duct propagation problems which encounter large area variations.


    Directory of Open Access Journals (Sweden)

    Richasanty Septima S


    Full Text Available The research in this thesis was done to examine the model of traffic flow of volcanic disaster evacuation path for uphill and downhill roads. The assessment was focused on the area of disaster evacuation path from the Pante Raya Bener Meriah intersection to Takengon. This model is assessed for two different types of time when which a disaster occurs; the disaster occurred at night and the disaster occurred during the day, especially during peak hours (working hours. The model was developed with attention to the exixtence of inflow and outflow along the evacuation route. Furthermore, the model obtained is solved numerically by using finite difference method. The chosen approach of this method is upwind scheme with time and space steps using forward difference and backward difference. The solution of this model in the form of simulated vehicle density along evacuation pathways. The research conducted is in the form of a model of traffic flow on evacuation paths and restricted to the inflow and outflow without alternative path as well as the conditions of the road which are uphill and downhill, showed a high density of vehicles either at night or during the day. Uphill road conditions resulted in decreased vehicle speed and vehicle density will increase, while downhill road conditions resulted in increased vehicle speed and vehicle density will decrease, meaning that the road conditions which are uphill and downhill will greatly affect the process of evacuation. Degree vehicles of evacuation efficiency occuring at night without an alternative pathway produces a high efficiency so that it can be interpreted that the evacuation process in the evening was successful and runs better than the evacuation process during the day, and this is caused by the existence of vehicles on the road evacuation process started thus affecting the efficiency levels.

  4. A New Accurate Finite-Difference Scheme Based on the Optimally Accurate Operators and Boundary-Condition Consistent Material Parameterization (United States)

    Kristek, J.; Moczo, P.; Galis, M.


    Geller and Takeuchi (1995) developed optimally accurate finite-difference (FD) operators. The operators minimize the error of the numerical solution of the discretized equation of motion. The criterion for obtaining the optimally accurate operators requires that the leading term of the truncation error of the discretized homogeneous (without body-force term) equation of motion (that is if operand is an eigenfunction and frequency is equal to eigenfrequency) is zero. Consequently, the optimally accurate operators satisfy (up to the leading term of the truncation error) homogeneous equation of motion. The grid dispersion of an optimally accurate FD scheme is significantly smaller than that of a standard FD scheme. A heterogeneous FD scheme cannot be anything else than a FD approximation to the heterogeneous formulation of the equation of motion (the same form of the equation for a point away from a material discontinuity and a point at the material discontinuity). If an optimally accurate FD scheme for heterogeneous media is to be obtained, the optimally accurate operators have to be applied to the heterogeneous formulation of the equation of motion. Moczo et al. (2002) found a heterogeneous formulation and developed a FD scheme based on standard staggered-grid 4th-order operators. The scheme is capable to sense both smooth material heterogeneity and material discontinuity at any position in a spatial grid. We present a new FD scheme that combines optimally accurate operators of Geller and Takeuchi (1995) with a material parameterization of Moczo et al. (2002). Models of a single material discontinuity, interior constant-velocity layer, and interior layer with the velocity gradient were calculated with the new scheme, conventional-operator scheme and analytically. Numerical results clearly isolate and demonstrate effects of the boundary and grid dispersion. The results demonstrate significant accuracy improvement compared to previous FD schemes.

  5. Extracting Transient Strain from GPS: A Novel Application of the Radial Basis Function-Finite Difference Method (United States)

    Hines, T.; Hetland, E.


    We present a novel, statistically rigorous method for smoothing and differentiating GPS data in both space and time. This method illuminates spatial and temporal variations of fundamentally important quantities such as strain rate, and results in high fidelity images of both tectonic and non-tectonic signals in GPS data. The main difficulty in spatially smoothing GPS data is that the data is not observed on a regular grid, which prevents the use of most of the well known filtering techniques. Our method is based on the recently developed radial basis function-finite difference (RBF-FD) method, which is designed for differentiating data at scattered observation points. We demonstrate that the RBF-FD method can also be effectively used to smooth scattered data, including data from both dense continuous GPS networks and sparser, semi-continuous networks. Existing methods which have been used to smooth GPS data involve least squares fitting of an interpolant to the observed displacement field. Our method has three distinguishing features which set it apart from previous strategies. 1) We use a prior assumption that the deformation is locally smooth, and so we can still smooth a displacement field containing known discontinuities from, for example, a creeping fault. 2) Our method is mathematically equivalent to a low-pass filter which has a well defined, user specified cutoff frequency. 3) The system of equations being solved in our method is sparse and well conditioned, making it possible to spatially and temporally smooth decades of GPS data from hundreds of stations. We present the results of our method for several real world cases, which include an unprecedented view of transient deformation in the Cascadia subduction zone.


    A three-point backward finite-difference method has been derived for a system of mixed hyperbolic¯¯parabolic (convection¯¯diffusion) partial differential equations (mixed PDEs). The method resorts to the three-point backward differenci...

  7. Low-Frequency Loudspeaker-Room Simulation Using Finite Differences in the Time Domain-Part 1: Analysis

    DEFF Research Database (Denmark)

    Celestinos, Adrian; Nielsen, Sofus Birkedal


    Small- and medium-size rectangular rooms have a strong influence on the low-frequency performance of loudspeakers. A simulation program based on the finite-difference time-domain (FDTD) method is introduced to analyze the sound field produced by loudspeakers in rectangular rooms at low frequencies...

  8. A new time–space domain high-order finite-difference method for the acoustic wave equation

    KAUST Repository

    Liu, Yang


    A new unified methodology was proposed in Finkelstein and Kastner (2007) [39] to derive spatial finite-difference (FD) coefficients in the joint time-space domain to reduce numerical dispersion. The key idea of this method is that the dispersion relation is completely satisfied at several designated frequencies. We develop this new time-space domain FD method further for 1D, 2D and 3D acoustic wave modeling using a plane wave theory and the Taylor series expansion. New spatial FD coefficients are frequency independent though they lead to a frequency dependent numerical solution. We prove that the modeling accuracy is 2nd-order when the conventional (2 M)th-order space domain FD and the 2nd-order time domain FD stencils are directly used to solve the acoustic wave equation. However, under the same discretization, the new 1D method can reach (2 M)th-order accuracy and is always stable. The 2D method can reach (2 M)th-order accuracy along eight directions and has better stability. Similarly, the 3D method can reach (2 M)th-order accuracy along 48 directions and also has better stability than the conventional FD method. The advantages of the new method are also demonstrated by the results of dispersion analysis and numerical modeling of acoustic wave equation for homogeneous and inhomogeneous acoustic models. In addition, we study the influence of the FD stencil length on numerical modeling for 1D inhomogeneous media, and derive an optimal FD stencil length required to balance the accuracy and efficiency of modeling. A new time-space domain high-order staggered-grid FD method for the 1D acoustic wave equation with variable densities is also developed, which has similar advantages demonstrated by dispersion analysis, stability analysis and modeling experiments. The methodology presented in this paper can be easily extended to solve similar partial difference equations arising in other fields of science and engineering. © 2009 Elsevier Inc.

  9. Roles of boundary conditions in DNA simulations: analysis of ion distributions with the finite-difference Poisson-Boltzmann method. (United States)

    Ye, Xiang; Cai, Qin; Yang, Wei; Luo, Ray


    The wide use of lattice-sum strategies in biomolecular simulations has raised many questions on potential artifacts in these strategies. One interesting question is the artifacts in the counterion distributions of highly charged systems. As one would anticipate, Coulombic interactions under the periodic boundary condition may deviate noticeably from those under the free boundary condition in the highly charged systems, significantly influencing their counterion distributions. On the other hand, the electrostatic screening due to water molecules and mobile ions may effectively damp the possible periodic distortions in Coulombic interactions. Therefore, the magnitude of periodicity-induced artifacts in counterion distributions is not straightforward to dissect without detailed analyses. In this study, we have developed a hybrid explicit counterion/implicit salt representation of mobile ions to address this question. We have chosen a well-studied DNA for easy validation of the minimal hybrid ion representation. Our detailed analysis of continuum ion distributions, explicit ion distributions, radial counterion distribution functions, and sequence-dependent counterion distributions, however, indicates that periodicity artifacts are not apparent at the surface of the tested DNA. Nevertheless, influence of boundary conditions does show up starting at the second solvation shell and becomes apparent at the cell boundary.

  10. Numerical simulation of 2-D seismic wave propagation in the presence of a topographic fluid-solid interface at the sea bottom by the curvilinear grid finite-difference method (United States)

    Sun, Yao-Chong; Zhang, Wei; Xu, Jian-Kuan; Chen, Xiaofei


    This study simulates seismic wave propagation across a 2-D topographic fluid (acoustic) and solid (elastic) interface at the sea bottom by the finite-difference method (FDM). In this method, seismic waves in sea water are governed by acoustic wave equations, whereas seismic waves in solid earth are governed by elastic wave equations. The fluid-solid interface condition is implemented on the interface. Body-conforming grids are used to fit the topographic fluid-solid interface which naturally avoids spurious diffractions due to staircase approximation. A collocated-grid MacCormack FDM is utilized to update the wavefields in the fluid and solid media. The fluid-solid interface condition is explicitly implemented by decomposing the velocity and stress components to the normal and tangential directions with respect to the interface within a fourth-order Runge-Kutta time-marching scheme. The algorithm solutions for both flat and topographic fluid-solid interface models are compared with analytical solutions and spectral element solutions to validate the proposed method. Results show a suitable agreement with the reference solutions and hence confirms the validity of this method. The proposed FDM enforces the numerical solutions to satisfy the exact interface condition and it is more accurate than the conventional FDM that uses effective media parameters to approximate the interface condition.

  11. POD-DEIM Based Model Order Reduction for the Spherical Shallow Water Equations with Turkel-Zwas Finite Difference Discretization

    Directory of Open Access Journals (Sweden)

    Pengfei Zhao


    Full Text Available We consider the shallow water equations (SWE in spherical coordinates solved by Turkel-Zwas (T-Z explicit large time-step scheme. To reduce the dimension of the SWE model, we use a well-known model order reduction method, a proper orthogonal decomposition (POD. As the computational complexity still depends on the number of variables of the full spherical SWE model, we use discrete empirical interpolation method (DEIM proposed by Sorensen to reduce the computational complexity of the reduced-order model. DEIM is very helpful in evaluating quadratically nonlinear terms in the reduced-order model. The numerical results show that POD-DEIM is computationally very efficient for implementing model order reduction for spherical SWE.

  12. Finite-difference time-domain modeling of infrasound from pulsating auroras and comparison with recent experiments (United States)

    de Larquier, S.; Pasko, V. P.; Stenbaek-Nielsen, H. C.; Wilson, C. R.; Olson, J. V.


    Atmospheric infrasonic waves are acoustic waves with frequencies ranging from 0.02 to 10 Hz, slightly higher than the acoustic cut-off frequency (approximately 0.032 Hz), but lower than the audible frequencies (typically 20 Hz-15 kHz) [e.g., Blanc, Ann. Geophys., 3, 673, 1985]. A number of natural events have been identified as generating atmospheric infrasound, such as volcanoes, tornadoes, avalanches, earthquakes [e.g., Bedard and Georges, Physics Today, S3, 32, 2000], ocean surfaces [e.g., Gossard and Hooke, Waves in the Atmosphere, Elsevier, 1975, Ch. 9], lightning [e.g., Assink et al., GRL, 35, L15802, 2008; Pasko, JGR, 114, D08205, 2009], or transient luminous events in the middle atmosphere termed sprites [e.g., Farges, Lightning: Principles, Instruments and Applications, H.D. Betz et al. (eds), Springer, 2009, Ch. 18]. The importance of infrasound studies has been emphasized in the past ten years from the Comprehensive Nuclear-Test-Ban Treaty verification perspective [e.g., Le Pichon et al., JGR, 114, D08112, 2009]. A proper understanding of infrasound propagation in the atmosphere is required for identification and classification of different infrasonic waves and their sources [Drob et al., JGR, 108, D21, 4680, 2003]. The goal of the present work is to provide a quantitative interpretation and explanation of infrasonic signatures from pulsating auroras reported recently by Wilson et al. [GRL, 32, L14810, 2005]. The infrasound signals observed with an infrasonic array at Fairbanks, Alaska had a mean amplitude of 0.05 Pa, a delay of about 5 minutes from the pulsating aurora, and an almost normal incidence on the ground plane [Wilson et al., 2005]. We employ a finite-difference time-domain (FDTD) model of infrasound propagation in a realistic atmosphere. We use the absorption model of infrasound introduced by Sutherland and Bass [J. Acoust. Soc. Am., 115, 1012, 2004]. Classical absorption mechanisms as well as molecular relaxation mechanisms are taken into

  13. Application of 'steady' state finite element and transient finite difference theory to sound propagation in a variable duct - A comparison with experiment (United States)

    Baumeister, K. J.; Eversman, W.; Astley, R. J.; White, J. W.


    Experimental data are presented for sound propagation in a simulated infinite hard wall duct with a large change in duct cross sectional area. The data are conveniently tabulated for further use. The 'steady' state finite element theory of Astley and Eversman (1981) and the transient finite difference theory of White (1981) are in good agreement with the data for both the axial and transverse pressure profiles and the axial phase angle. Therefore, numerical finite difference and finite element theories appear to be ideally suited for handling duct propagation problems which encounter large axial gradients in acoustic parameters. The measured energy reflection coefficient agrees with the values from the Astley-Eversman modal coupling model.

  14. Mass conservative and energy stable finite difference methods for the quasi-incompressible Navier-Stokes-Cahn-Hilliard system: Primitive variable and projection-type schemes (United States)

    Guo, Z.; Lin, P.; Lowengrub, J.; Wise, S. M.


    In this paper we describe two fully mass conservative, energy stable, finite difference methods on a staggered grid for the quasi-incompressible Navier-Stokes-Cahn-Hilliard (q-NSCH) system governing a binary incompressible fluid flow with variable density and viscosity. Both methods, namely the primitive method (finite difference method in the primitive variable formulation) and the projection method (finite difference method in a projection-type formulation), are so designed that the mass of the binary fluid is preserved, and the energy of the system equations is always non-increasing in time at the fully discrete level. We also present an efficient, practical nonlinear multigrid method - comprised of a standard FAS method for the Cahn-Hilliard equation, and a method based on the Vanka-type smoothing strategy for the Navier-Stokes equation - for solving these equations. We test the scheme in the context of Capillary Waves, rising droplets and Rayleigh-Taylor instability. Quantitative comparisons are made with existing analytical solutions or previous numerical results that validate the accuracy of our numerical schemes. Moreover, in all cases, mass of the single component and the binary fluid was conserved up to 10 to -8 and energy decreases in time.

  15. Implementation of the critical points model in a SFM-FDTD code working in oblique incidence

    Energy Technology Data Exchange (ETDEWEB)

    Hamidi, M; Belkhir, A; Lamrous, O [Laboratoire de Physique et Chimie Quantique, Universite Mouloud Mammeri, Tizi-Ouzou (Algeria); Baida, F I, E-mail: [Departement d' Optique P.M. Duffieux, Institut FEMTO-ST UMR 6174 CNRS Universite de Franche-Comte, 25030 Besancon Cedex (France)


    We describe the implementation of the critical points model in a finite-difference-time-domain code working in oblique incidence and dealing with dispersive media through the split field method. Some tests are presented to validate our code in addition to an application devoted to plasmon resonance of a gold nanoparticles grating.

  16. A Navier-Strokes Chimera Code on the Connection Machine CM-5: Design and Performance (United States)

    Jespersen, Dennis C.; Levit, Creon; Kwak, Dochan (Technical Monitor)


    We have implemented a three-dimensional compressible Navier-Stokes code on the Connection Machine CM-5. The code is set up for implicit time-stepping on single or multiple structured grids. For multiple grids and geometrically complex problems, we follow the 'chimera' approach, where flow data on one zone is interpolated onto another in the region of overlap. We will describe our design philosophy and give some timing results for the current code. A parallel machine like the CM-5 is well-suited for finite-difference methods on structured grids. The regular pattern of connections of a structured mesh maps well onto the architecture of the machine. So the first design choice, finite differences on a structured mesh, is natural. We use centered differences in space, with added artificial dissipation terms. When numerically solving the Navier-Stokes equations, there are liable to be some mesh cells near a solid body that are small in at least one direction. This mesh cell geometry can impose a very severe CFL (Courant-Friedrichs-Lewy) condition on the time step for explicit time-stepping methods. Thus, though explicit time-stepping is well-suited to the architecture of the machine, we have adopted implicit time-stepping. We have further taken the approximate factorization approach. This creates the need to solve large banded linear systems and creates the first possible barrier to an efficient algorithm. To overcome this first possible barrier we have considered two options. The first is just to solve the banded linear systems with data spread over the whole machine, using whatever fast method is available. This option is adequate for solving scalar tridiagonal systems, but for scalar pentadiagonal or block tridiagonal systems it is somewhat slower than desired. The second option is to 'transpose' the flow and geometry variables as part of the time-stepping process: Start with x-lines of data in-processor. Form explicit terms in x, then transpose so y-lines of data are

  17. Duals of Affine Grassmann Codes and Their Relatives

    DEFF Research Database (Denmark)

    Beelen, P.; Ghorpade, S. R.; Hoholdt, T.


    Affine Grassmann codes are a variant of generalized Reed-Muller codes and are closely related to Grassmann codes. These codes were introduced in a recent work by Beelen Here, we consider, more generally, affine Grassmann codes of a given level. We explicitly determine the dual of an affine Grassm...

  18. Building an explicit de Sitter

    Energy Technology Data Exchange (ETDEWEB)

    Louis, Jan [Hamburg Univ. (Germany). 2. Inst. fuer Theoretische Physik; Hamburg Univ. (Germany). Zentrum fuer Mathematische Physik; Rummel, Markus; Valandro, Roberto [Hamburg Univ. (Germany). 2. Inst. fuer Theoretische Physik; Westphal, Alexander [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany). Gruppe Theorie


    We construct an explicit example of a de Sitter vacuum in type IIB string theory that realizes the proposal of Kaehler uplifting. As the large volume limit in this method depends on the rank of the largest condensing gauge group we carry out a scan of gauge group ranks over the Kreuzer-Skarke set of toric Calabi-Yau threefolds. We find large numbers of models with the largest gauge group factor easily exceeding a rank of one hundred. We construct a global model with Kaehler uplifting on a two-parameter model on CP{sup 4}{sub 11169}, by an explicit analysis from both the type IIB and F-theory point of view. The explicitness of the construction lies in the realization of a D7 brane configuration, gauge flux and RR and NS flux choices, such that all known consistency conditions are met and the geometric moduli are stabilized in a metastable de Sitter vacuum with spontaneous GUT scale supersymmetry breaking driven by an F-term of the Kaehler moduli.

  19. Implicit-explicit (IMEX) evolution of single black holes

    CERN Document Server

    Lau, Stephen R; Pfeiffer, Harald P


    Numerical simulations of binary black holes---an important predictive tool for the detection of gravitational waves---are computationally expensive, especially for binaries with high mass ratios or with rapidly spinning constituent holes. Existing codes for evolving binary black holes rely on explicit timestepping methods for which the timestep size is limited by the Courant-Friedrichs-Lewy condition. In explicit evolutions of binary black holes, the timestep size is typically orders of magnitude smaller than the relevant physical timescales. Implicit timestepping methods allow for larger timesteps and often reduce the total computational cost. However, fully implicit methods can be difficult to implement for nonlinear evolution systems like the Einstein equations. Therefore, in this paper we explore implicit-explicit (IMEX) methods and use them for the first time to evolve black-hole spacetimes. Specifically, as a first step toward IMEX evolution of a full binary-black-hole spacetime, we develop an IMEX algo...

  20. Simulation of nonlinear propagation of biomedical ultrasound using PZFlex and the KZK Texas code

    Energy Technology Data Exchange (ETDEWEB)

    Qiao, Shan, E-mail:; Jackson, Edward; Coussios, Constantin-C; Cleveland, Robin [Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Oxford (United Kingdom)


    In biomedical ultrasound nonlinear acoustics can be important in both diagnostic and therapeutic applications and robust simulations tools are needed in the design process but also for day-to-day use such as treatment planning. For most biomedical application the ultrasound sources generate focused sound beams of finite amplitude. The KZK equation is a common model as it accounts for nonlinearity, absorption and paraxial diffraction and there are a number of solvers available, primarily developed by research groups. We compare the predictions of the KZK Texas code (a finite-difference time-domain algorithm) to an FEM-based commercial software, PZFlex. PZFlex solves the continuity equation and momentum conservation equation with a correction for nonlinearity in the equation of state incorporated using an incrementally linear, 2nd order accurate, explicit algorithm in time domain. Nonlinear ultrasound beams from two transducers driven at 1 MHz and 3.3 MHz respectively were simulated by both the KZK Texas code and PZFlex, and the pressure field was also measured by a fibre-optic hydrophone to validate the models. Further simulations were carried out a wide range of frequencies. The comparisons showed good agreement for the fundamental frequency for PZFlex, the KZK Texas code and the experiments. For the harmonic components, the KZK Texas code was in good agreement with measurements but PZFlex underestimated the amplitude: 32% for the 2nd harmonic and 66% for the 3rd harmonic. The underestimation of harmonics by PZFlex was more significant when the fundamental frequency increased. Furthermore non-physical oscillations in the axial profile of harmonics occurred in the PZFlex results when the amplitudes were relatively low. These results suggest that careful benchmarking of nonlinear simulations is important.

  1. PARMELA-B A new version of PARMELA with coherent synchrotron radiation effects and a finite difference space charge routine

    CERN Document Server

    Koltenbah, B E C; Greegor, R B; Dowell, D H


    Recent interest in advanced laser light sources has stimulated development of accelerator systems of intermediate beam energy, 100-200 MeV, and high charge, 1-10 nC, for high power FEL applications and high energy, 1-2 GeV, high charge, SASE-FEL applications. The current generation of beam transport codes which were developed for high-energy, low-charge beams with low self-fields are inadequate to address this energy and charge regime, and better computational tools are required to accurately calculate self-fields. To that end, we have developed a new version of PARMELA, named PARMELA_B and written in Fortran 95, which includes a coherent synchrotron radiation (CSR) routine and an improved, generalized space charge (SC) routine. An electron bunch is simulated by a collection of macro-particles, which traverses a series of beam line elements. At each time step through the calculation, the momentum of each particle is updated due to the presence of external and self- fields. The self-fields are due to CSR and S...

  2. Wave-vector and polarization dependent impedance model for a hexagonal periodic metasurface exemplified through finite-difference time-domain simulations. (United States)

    Ding, Yi S; He, Yang


    An isotropic impedance sheet model is proposed for a loop-type hexagonal periodic metasurface. Both frequency and wave-vector dispersion are considered near the resonance frequency. Therefore both the angle and polarization dependences of the metasurface impedance can be properly and simultaneously described in our model. The constitutive relation of this model is transformed into auxiliary differential equations which are integrated into the finite-difference time-domain algorithm. Finally, a finite large metasurface sample under oblique illumination is used to test the model and the algorithm. Our model and algorithm can significantly increase the accuracy of the homogenization methods for modeling periodic metasurfaces.

  3. Determination of excited states of quantum systems by finite difference time domain method (FDTD) with supersymmetric quantum mechanics (SUSY-QM)

    Energy Technology Data Exchange (ETDEWEB)

    Sudiarta, I. Wayan; Angraini, Lily Maysari, E-mail: [Physics Study Program, University of Mataram, Jln. Majapahit 62 Mataram, NTB (Indonesia)


    We have applied the finite difference time domain (FDTD) method with the supersymmetric quantum mechanics (SUSY-QM) procedure to determine excited energies of one dimensional quantum systems. The theoretical basis of FDTD, SUSY-QM, a numerical algorithm and an illustrative example for a particle in a one dimensional square-well potential were given in this paper. It was shown that the numerical results were in excellent agreement with theoretical results. Numerical errors produced by the SUSY-QM procedure was due to errors in estimations of superpotentials and supersymmetric partner potentials.

  4. Evaluation and Modeling of the Variation of Electromagnetic Field on the Cross Section of a Transmission Line Using Finite Difference Method

    Directory of Open Access Journals (Sweden)

    Jorge I. Silva O.


    Full Text Available This paper present a purpose to characterize power lines in order to identify level of operation since the power grid planning. In order to model a power line was required the use of computational tools to generate a mathematical model in MATLAB, which was based on the finite difference method and represent the electromagnetic field (EMF contribution. The results were contrasted with real and measured values taken from a cross section of a power line that was previously modeled. Statistical analysis showed an accurate estimation of the electric and magnetic field emitted by the line identifying the same shape of the plotted curve and values in an acceptable range.

  5. Hybrid LBM-MRT model coupled with finite difference method for double-diffusive mixed convection in rectangular enclosure with insulated moving lid (United States)

    Bettaibi, Soufiene; Kuznik, Frédéric; Sediki, Ezeddine


    This paper presents a numerical study of thermosolutal mixed convection in rectangular enclosure with sliding top lid. The fluid flow is solved by the multiple relaxation time (MRT) lattice Boltzmann method (LBM), whereas the temperature and concentration fields are computed by finite difference method (FDM). The main objective of this study is to investigate the accuracy and the effectiveness of such model to predict thermodynamics for heat and mass transfer in a driven cavity. This model is validated with different numerical methods in the current literature. A good agreement is obtained between our results and previous works. The different comparisons demonstrate the robustness and the accuracy of the proposed approach.

  6. Verification of a Higher-Order Finite Difference Scheme for the One-Dimensional Two-Fluid Model

    Directory of Open Access Journals (Sweden)

    William D. Fullmer


    Full Text Available The one-dimensional two-fluid model is widely acknowledged as the most detailed and accurate macroscopic formulation model of the thermo-fluid dynamics in nuclear reactor safety analysis. Currently the prevailing one-dimensional thermal hydraulics codes are only first-order accurate. The benefit of first-order schemes is numerical viscosity, which serves as a regularization mechanism for many otherwise ill-posed two-fluid models. However, excessive diffusion in regions of large gradients leads to poor resolution of phenomena related to void wave propagation. In this work, a higher-order shock capturing method is applied to the basic equations for incompressible and isothermal flow of the one-dimensional two-fluid model. The higher-order accuracy is gained by a strong stability preserving multi-step scheme for the time discretization and a minmod flux limiter scheme for the convection terms. Additionally the use of a staggered grid allows for several second-order centered terms, when available. The continuity equations are first tested by manipulating the two-fluid model into a pair of linear wave equations and tested for smooth and discontinuous initial data. The two-fluid model is benchmarked with the water faucet problem. With the higher-order method, the ill-posed nature of the governing equations presents severe challenges due to a growing void fraction jump in the solution. Therefore the initial and boundary conditions of the problem are modified in order to eliminate a large counter-current flow pattern that develops. With the modified water faucet problem the numerical models behave well and allow a convergence study. Using the L1 norm of the liquid fraction, it is verified that the first and higher-order numerical schemes converge to the quasi-analytical solution at a rate of O(1/2 and O(2/3, respectively. It is also shown that the growing void jump is a contact discontinuity, i.e. it is a linearly degenerate wave. The sub

  7. Aspects of numerical and representational methods related to the finite-difference simulation of advective and dispersive transport of freshwater in a thin brackish aquifer (United States)

    Merritt, M.L.


    The simulation of the transport of injected freshwater in a thin brackish aquifer, overlain and underlain by confining layers containing more saline water, is shown to be influenced by the choice of the finite-difference approximation method, the algorithm for representing vertical advective and dispersive fluxes, and the values assigned to parametric coefficients that specify the degree of vertical dispersion and molecular diffusion that occurs. Computed potable water recovery efficiencies will differ depending upon the choice of algorithm and approximation method, as will dispersion coefficients estimated based on the calibration of simulations to match measured data. A comparison of centered and backward finite-difference approximation methods shows that substantially different transition zones between injected and native waters are depicted by the different methods, and computed recovery efficiencies vary greatly. Standard and experimental algorithms and a variety of values for molecular diffusivity, transverse dispersivity, and vertical scaling factor were compared in simulations of freshwater storage in a thin brackish aquifer. Computed recovery efficiencies vary considerably, and appreciable differences are observed in the distribution of injected freshwater in the various cases tested. The results demonstrate both a qualitatively different description of transport using the experimental algorithms and the interrelated influences of molecular diffusion and transverse dispersion on simulated recovery efficiency. When simulating natural aquifer flow in cross-section, flushing of the aquifer occurred for all tested coefficient choices using both standard and experimental algorithms. ?? 1993.

  8. Two-Dimensional Finite-Difference Modeling of Broadband Regional Wave Propagation Phenomena: Validation of Regional Three-Dimensional Earth Models and Prediction of Anomalous Regional Phases

    Energy Technology Data Exchange (ETDEWEB)

    Goldstein, P; Ryall, F D; Pasyanos, M E; Schultz, C A; Walter, W R


    An important challenge for seismic monitoring of nuclear explosions at low magnitude to verify a nuclear-test-ban treaty is the development of techniques that use regional phases for detection, location, and identification. In order to use such phases, region-specific earth models and tools are needed that accurately predict features such as travel times, amplitudes, and spectral characteristics. In this paper, we present our efforts to use two-dimensional finite-difference modeling to help develop and validate regional earth models for the Middle East and North Africa and to develop predictive algorithms for identifying anomalous regional phases. To help develop and validate a model for the Middle East and North Africa, we compare data and finite-difference simulations for selected regions. We show that the proposed three-dimensional regional model is a significant improvement over standard one-dimensional models by comparing features of broadband data and simulations and differences between observed and predicted features such as narrow-band group velocities. We show how a potential trade-off between source and structure can be avoided by constraining source parameters such as depth, mechanism, and moment/source-time function with independent data. We also present numerous observations of anomalous timing and amplitude of regional phases and show how incorporation of two-dimensional structure can explain many of these observations. Based on these observations, and the predictive capability of our simulations, we develop a simple model that can accurately predict the timing of such phases.

  9. Application of the finite difference method to model pH and substrate concentration in a double-chamber microbial fuel cell. (United States)

    Zhang, Liwei; Deshusses, Marc


    The purpose of this study was to develop a mathematical model that can describe glucose degradation in a microbial fuel cell (MFC) with the use of finite difference approach. The dynamic model can describe both substrate and pH changes in the anode chamber of a double-chamber MFC. It was developed using finite differences and incorporates basic mass transfer concepts. Model simulation results could fit the experimental data for substrate consumption well, while there was a moderate discrepancy (maximum 0.11 pH unit) between the simulated pH and the experimental data. A parametric sensitivity analysis showed that increases in acetate and propionate consumption rates can cause great decrease in chemical oxygen demand (COD) in the anode chamber, while an increase in glucose consumption rate does not result in significant changes of COD reduction. Therefore, the rate limitation steps of glucose degradation are the oxidations of secondary degradation products of glucose (acetate and propionate). Due to the buffering effect of the nutrient solution, the increases in glucose, acetate and propionate consumption rates did not result in much change on pH of the anode chamber.

  10. On the Derivation of Highest-Order Compact Finite Difference Schemes for the One- and Two-Dimensional Poisson Equation with Dirichlet Boundary Conditions

    KAUST Repository

    Settle, Sean O.


    The primary aim of this paper is to answer the question, What are the highest-order five- or nine-point compact finite difference schemes? To answer this question, we present several simple derivations of finite difference schemes for the one- and two-dimensional Poisson equation on uniform, quasi-uniform, and nonuniform face-to-face hyperrectangular grids and directly prove the existence or nonexistence of their highest-order local accuracies. Our derivations are unique in that we do not make any initial assumptions on stencil symmetries or weights. For the one-dimensional problem, the derivation using the three-point stencil on both uniform and nonuniform grids yields a scheme with arbitrarily high-order local accuracy. However, for the two-dimensional problem, the derivation using the corresponding five-point stencil on uniform and quasi-uniform grids yields a scheme with at most second-order local accuracy, and on nonuniform grids yields at most first-order local accuracy. When expanding the five-point stencil to the nine-point stencil, the derivation using the nine-point stencil on uniform grids yields at most sixth-order local accuracy, but on quasi- and nonuniform grids yields at most fourth- and third-order local accuracy, respectively. © 2013 Society for Industrial and Applied Mathematics.

  11. RCS modeling with the TSAR FDTD code

    Energy Technology Data Exchange (ETDEWEB)

    Pennock, S.T.; Ray, S.L.


    The TSAR electromagnetic modeling system consists of a family of related codes that have been designed to work together to provide users with a practical way to set up, run, and interpret the results from complex 3-D finite-difference time-domain (FDTD) electromagnetic simulations. The software has been in development at the Lawrence Livermore National Laboratory (LLNL) and at other sites since 1987. Active internal use of the codes began in 1988 with limited external distribution and use beginning in 1991. TSAR was originally developed to analyze high-power microwave and EMP coupling problems. However, the general-purpose nature of the tools has enabled us to use the codes to solve a broader class of electromagnetic applications and has motivated the addition of new features. In particular a family of near-to-far field transformation routines have been added to the codes, enabling TSAR to be used for radar-cross section and antenna analysis problems.

  12. Parallel Explicit and Implicit Control of Reaching


    Pietro Mazzoni; Wexler, Nancy S


    Background Human movement can be guided automatically (implicit control) or attentively (explicit control). Explicit control may be engaged when learning a new movement, while implicit control enables simultaneous execution of multiple actions. Explicit and implicit control can often be assigned arbitrarily: we can simultaneously drive a car and tune the radio, seamlessly allocating implicit or explicit control to either action. This flexibility suggests that sensorimotor signals, including t...

  13. FCG: a code generator for lazy functional languages

    NARCIS (Netherlands)

    Kastens, U.; Langendoen, K.G.; Hartel, Pieter H.; Pfahler, P.


    The FCGcode generator produces portable code that supports efficient two-space copying garbage collection. The code generator transforms the output of the FAST compiler front end into an abstract machine code. This code explicitly uses a call stack, which is accessible to the garbage collector. In

  14. Parallel explicit and implicit control of reaching. (United States)

    Mazzoni, Pietro; Wexler, Nancy S


    Human movement can be guided automatically (implicit control) or attentively (explicit control). Explicit control may be engaged when learning a new movement, while implicit control enables simultaneous execution of multiple actions. Explicit and implicit control can often be assigned arbitrarily: we can simultaneously drive a car and tune the radio, seamlessly allocating implicit or explicit control to either action. This flexibility suggests that sensorimotor signals, including those that encode spatially overlapping perception and behavior, can be accurately segregated to explicit and implicit control processes. We tested human subjects' ability to segregate sensorimotor signals to parallel control processes by requiring dual (explicit and implicit) control of the same reaching movement and testing for interference between these processes. Healthy control subjects were able to engage dual explicit and implicit motor control without degradation of performance compared to explicit or implicit control alone. We then asked whether segregation of explicit and implicit motor control can be selectively disrupted by studying dual-control performance in subjects with no clinically manifest neurologic deficits in the presymptomatic stage of Huntington's disease (HD). These subjects performed successfully under either explicit or implicit control alone, but were impaired in the dual-control condition. The human nervous system can exert dual control on a single action, and is therefore able to accurately segregate sensorimotor signals to explicit and implicit control. The impairment observed in the presymptomatic stage of HD points to a possible crucial contribution of the striatum to the segregation of sensorimotor signals to multiple control processes.

  15. Parallel explicit and implicit control of reaching.

    Directory of Open Access Journals (Sweden)

    Pietro Mazzoni


    Full Text Available Human movement can be guided automatically (implicit control or attentively (explicit control. Explicit control may be engaged when learning a new movement, while implicit control enables simultaneous execution of multiple actions. Explicit and implicit control can often be assigned arbitrarily: we can simultaneously drive a car and tune the radio, seamlessly allocating implicit or explicit control to either action. This flexibility suggests that sensorimotor signals, including those that encode spatially overlapping perception and behavior, can be accurately segregated to explicit and implicit control processes.We tested human subjects' ability to segregate sensorimotor signals to parallel control processes by requiring dual (explicit and implicit control of the same reaching movement and testing for interference between these processes. Healthy control subjects were able to engage dual explicit and implicit motor control without degradation of performance compared to explicit or implicit control alone. We then asked whether segregation of explicit and implicit motor control can be selectively disrupted by studying dual-control performance in subjects with no clinically manifest neurologic deficits in the presymptomatic stage of Huntington's disease (HD. These subjects performed successfully under either explicit or implicit control alone, but were impaired in the dual-control condition.The human nervous system can exert dual control on a single action, and is therefore able to accurately segregate sensorimotor signals to explicit and implicit control. The impairment observed in the presymptomatic stage of HD points to a possible crucial contribution of the striatum to the segregation of sensorimotor signals to multiple control processes.

  16. Prediction of low-frequency structure-borne sound in concrete structures using the finite-difference time-domain method. (United States)

    Asakura, T; Ishizuka, T; Miyajima, T; Toyoda, M; Sakamoto, S


    Due to limitations of computers, prediction of structure-borne sound remains difficult for large-scale problems. Herein a prediction method for low-frequency structure-borne sound transmissions on concrete structures using the finite-difference time-domain scheme is proposed. The target structure is modeled as a composition of multiple plate elements to reduce the dimensions of the simulated vibration field from three-dimensional discretization by solid elements to two-dimensional discretization. This scheme reduces both the calculation time and the amount of required memory. To validate the proposed method, the vibration characteristics using the numerical results of the proposed scheme are compared to those measured for a two-level concrete structure. Comparison of the measured and simulated results suggests that the proposed method can be used to simulate real-scale structures.

  17. GPR data modeling by using the Finite Difference Time Domain (FDTD) methods; Modelagem de dados de GPR atraves do metodo FDTD

    Energy Technology Data Exchange (ETDEWEB)

    Dias, Gleide A.N.; Silva, Jadir C.; Rocha, Paula F.; Costa, Jorge L. [Universidade Federal, Rio de Janeiro, RJ (Brazil). Dept. de Geologia]. E-mail:;;;


    Presently the oil industry has shown the importance of defining the structural framework of reservoirs. This study intends to contribute for the solution of this problem, using synthetic models in order to evaluate the electromagnetic signal due to a certain target. Use was made of an algorithm, which is based in the Finite Difference Time Domain Methods (FDTD). The simulated results of this survey found the best parameters for the chosen frequencies. In the present study there were simulated polarization, geometry and constitutive parameters (dielectric permittivity and electric conductivity). The results, using frequencies of 50 and 100 MHz, show clearly the effects of the electromagnetic waves attenuation and their problems related with signal resolution of targets in depth. (author)

  18. Finite-difference time-domain (FDTD) analysis on the interaction between a metal block and a radially polarized focused beam. (United States)

    Kitamura, Kyoko; Sakai, Kyosuke; Noda, Susumu


    Radially polarized focused beams have attracted a great deal of attention because of their unique properties characterized by the longitudinal field. Although this longitudinal field is strongly confined to the beam axis, the energy flow, i.e., the Poynting vector, has null intensity on the axis. Hence, the interaction of the focused beam and matter has thus far been unclear. We analyzed the interactions between the focused beam and a subwavelength metal block placed at the center of the focus using three-dimensional finite-difference time-domain (FDTD) calculation. We found that most of the Poynting energy propagates through to the far-field, and that a strong enhancement of the electric field appeared on the metal surface. This enhancement is attributed to the constructive interference of the symmetric electric field and the coupling to the surface plasmon mode.

  19. Solving the nonlinear Schrödinger equation using cubic B-spline interpolation and finite difference methods on dual solitons (United States)

    Ahmad, Azhar; Azmi, Amirah; Majid, Ahmad Abd.; Hamid, Nur Nadiah Abd


    In this paper, Nonlinear Schrödinger (NLS) equation with Neumann boundary conditions is solved using cubic B-spline interpolation method (CuBSIM) and finite difference method (FDM). Firstly, FDM is applied on the time discretization and cubic B-spline is utilized as an interpolation function in the space dimension with the help of theta-weighted method. The second approach is based on the FDM applied on the time and space discretization with the help of theta-weighted method. The CuBSIM is shown to be stable by using von Neumann stability analysis. The proposed method is tested on the interaction of the dual solitons of the NLS equation. The accuracy of the numerical results is measured by the Euclidean-norm and infinity-norm. CuBSIM is found to produce more accurate results than the FDM.

  20. Simulation of cylindrical flow to a well using the U.S. Geological Survey Modular Finite-Difference Ground-Water Flow Model (United States)

    Reilly, Thomas E.; Harbaugh, Arlen W.


    Cylindrical (axisymmetric) flow to a well is an important specialized topic of ground-water hydraulics and has been applied by many investigators to determine aquifer properties and determine heads and flows in the vicinity of the well. A recent modification to the U.S. Geological Survey Modular Three-Dimensional Finite-Difference Ground-Water Flow Model provides the opportunity to simulate axisymmetric flow to a well. The theory involves the conceptualization of a system of concentric shells that are capable of reproducing the large variations in gradient in the vicinity of the well by decreasing their area in the direction of the well. The computer program presented serves as a preprocessor to the U.S. Geological Survey model by creating the input data file needed to implement the axisymmetric conceptualization. Data input requirements to this preprocessor are described, and a comparison with a known analytical solution indicates that the model functions appropriately.

  1. Seismic wavefield simulation in 2D elastic and viscoelastic tilted transversely isotropic media: comparisons between four different kinds of finite-difference grid schemes (United States)

    Li, Zhong-sheng; Bai, Chao-ying; Sun, Yao-chong


    In this paper, we use the staggered grid, the auxiliary grid, the rotated staggered grid and the non-staggered grid finite-difference methods to simulate the wavefield propagation in 2D elastic tilted transversely isotropic (TTI) and viscoelastic TTI media, respectively. Under the stability conditions, we choose different spatial and temporal intervals to get wavefront snapshots and synthetic seismograms to compare the four algorithms in terms of computational accuracy, CPU time, phase shift, frequency dispersion and amplitude preservation. The numerical results show that: (1) the rotated staggered grid scheme has the least memory cost and the fastest running speed; (2) the non-staggered grid scheme has the highest computational accuracy and least phase shift; (3) the staggered grid has less frequency dispersion even when the spatial interval becomes larger.

  2. Ab initio calculation of the deformation potential and photoelastic coefficients of silicon with a non-uniform finite-difference solver based on the local density approximation (United States)

    Witzens, Jeremy


    The band diagram, deformation potential and photoelastic tensor of silicon are calculated self-consistently under uniaxial and shear strain by solving for the electronic wavefunctions with a finite-difference method. Many-body effects are accounted for by the local density approximation. In order to accommodate the large number of grid points required due to the diverging electrostatic potential near the atomic nuclei in an all-electron calculation, a non-uniform meshing is adopted. Internal displacements are taken into account by adding an additional coordinate transform to the method of Bir and Pikus. Good consistency of the calculated deformation potential and photoelastic coefficients is obtained with prior experimental and theoretical results, validating the numerical methods. Furthermore, it is shown that a slight correction of the multiplicative coefficient of the Xα approximation for conduction bands results in good agreement with experiment for both the direct and indirect bandgaps.

  3. Cyclone Codes


    Schindelhauer, Christian; Jakoby, Andreas; Köhler, Sven


    We introduce Cyclone codes which are rateless erasure resilient codes. They combine Pair codes with Luby Transform (LT) codes by computing a code symbol from a random set of data symbols using bitwise XOR and cyclic shift operations. The number of data symbols is chosen according to the Robust Soliton distribution. XOR and cyclic shift operations establish a unitary commutative ring if data symbols have a length of $p-1$ bits, for some prime number $p$. We consider the graph given by code sym...

  4. Coding Partitions

    Directory of Open Access Journals (Sweden)

    Fabio Burderi


    Full Text Available Motivated by the study of decipherability conditions for codes weaker than Unique Decipherability (UD, we introduce the notion of coding partition. Such a notion generalizes that of UD code and, for codes that are not UD, allows to recover the ``unique decipherability" at the level of the classes of the partition. By tacking into account the natural order between the partitions, we define the characteristic partition of a code X as the finest coding partition of X. This leads to introduce the canonical decomposition of a code in at most one unambiguouscomponent and other (if any totally ambiguouscomponents. In the case the code is finite, we give an algorithm for computing its canonical partition. This, in particular, allows to decide whether a given partition of a finite code X is a coding partition. This last problem is then approached in the case the code is a rational set. We prove its decidability under the hypothesis that the partition contains a finite number of classes and each class is a rational set. Moreover we conjecture that the canonical partition satisfies such a hypothesis. Finally we consider also some relationships between coding partitions and varieties of codes.

  5. Data Modeling Using Finite Differences (United States)

    Rhoads, Kathryn; Mendoza Epperson, James A.


    The Common Core State Standards for Mathematics (CCSSM) states that high school students should be able to recognize patterns of growth in linear, quadratic, and exponential functions and construct such functions from tables of data (CCSSI 2010). In their work with practicing secondary teachers, the authors found that teachers may make some tacit…

  6. Coding Class

    DEFF Research Database (Denmark)

    Ejsing-Duun, Stine; Hansbøl, Mikala

    Sammenfatning af de mest væsentlige pointer fra hovedrapporten: Dokumentation og evaluering af Coding Class......Sammenfatning af de mest væsentlige pointer fra hovedrapporten: Dokumentation og evaluering af Coding Class...

  7. Parallel PWTD-Accelerated Explicit Solution of the Time Domain Electric Field Volume Integral Equation

    KAUST Repository

    Liu, Yang


    A parallel plane-wave time-domain (PWTD)-accelerated explicit marching-on-in-time (MOT) scheme for solving the time domain electric field volume integral equation (TD-EFVIE) is presented. The proposed scheme leverages pulse functions and Lagrange polynomials to spatially and temporally discretize the electric flux density induced throughout the scatterers, and a finite difference scheme to compute the electric fields from the Hertz electric vector potentials radiated by the flux density. The flux density is explicitly updated during time marching by a predictor-corrector (PC) scheme and the vector potentials are efficiently computed by a scalar PWTD scheme. The memory requirement and computational complexity of the resulting explicit PWTD-PC-EFVIE solver scale as ( log ) s s O N N and ( ) s t O N N , respectively. Here, s N is the number of spatial basis functions and t N is the number of time steps. A scalable parallelization of the proposed MOT scheme on distributed- memory CPU clusters is described. The efficiency, accuracy, and applicability of the resulting (parallelized) PWTD-PC-EFVIE solver are demonstrated via its application to the analysis of transient electromagnetic wave interactions on canonical and real-life scatterers represented with up to 25 million spatial discretization elements.

  8. GAPCON-THERMAL-3 code description

    Energy Technology Data Exchange (ETDEWEB)

    Lanning, D.D.; Mohr, C.L.; Panisko, F.E.; Stewart, K.B.


    GAPCON-3 is a computer program that predicts the thermal and mechanical behavior of an operating fuel rod during its normal lifetime. The code calculates temperatures, dimensions, stresses, and strains for the fuel and the cladding in both the radial and axial directions for each step of the user specified power history. The method of weighted residuals is for the steady state temperature calculation, and is combined with a finite difference approximation of the time derivative for transient conditions. The stress strain analysis employs an iterative axisymmetric finite element procedure that includes plasticity and creep for normal and pellet-clad mechanical interaction loads. GAPCON-3 can solve steady state and operational transient problems. Comparisons of GAPCON-3 predictions to both closed form analytical solutions and actual inpile instrumented fuel rod data have demonstrated the ability of the code to calculate fuel rod behavior. GAPCON-3 features a restart capability and an associated plot package unavailable in previous GAPCON series codes.

  9. code {poems}

    Directory of Open Access Journals (Sweden)

    Ishac Bertran


    Full Text Available "Exploring the potential of code to communicate at the level of poetry," the code­ {poems} project solicited submissions from code­writers in response to the notion of a poem, written in a software language which is semantically valid. These selections reveal the inner workings, constitutive elements, and styles of both a particular software and its authors.

  10. A two-dimensional linear elasticity problem for anisotropic materials, solved with a parallelization code

    Directory of Open Access Journals (Sweden)

    Mihai-Victor PRICOP


    Full Text Available The present paper introduces a numerical approach of static linear elasticity equations for anisotropic materials. The domain and boundary conditions are simple, to enhance an easy implementation of the finite difference scheme. SOR and gradient are used to solve the resulting linear system. The simplicity of the geometry is also useful for MPI parallelization of the code.

  11. An implicit Smooth Particle Hydrodynamic code

    Energy Technology Data Exchange (ETDEWEB)

    Knapp, Charles E. [Univ. of New Mexico, Albuquerque, NM (United States)


    An implicit version of the Smooth Particle Hydrodynamic (SPH) code SPHINX has been written and is working. In conjunction with the SPHINX code the new implicit code models fluids and solids under a wide range of conditions. SPH codes are Lagrangian, meshless and use particles to model the fluids and solids. The implicit code makes use of the Krylov iterative techniques for solving large linear-systems and a Newton-Raphson method for non-linear corrections. It uses numerical derivatives to construct the Jacobian matrix. It uses sparse techniques to save on memory storage and to reduce the amount of computation. It is believed that this is the first implicit SPH code to use Newton-Krylov techniques, and is also the first implicit SPH code to model solids. A description of SPH and the techniques used in the implicit code are presented. Then, the results of a number of tests cases are discussed, which include a shock tube problem, a Rayleigh-Taylor problem, a breaking dam problem, and a single jet of gas problem. The results are shown to be in very good agreement with analytic solutions, experimental results, and the explicit SPHINX code. In the case of the single jet of gas case it has been demonstrated that the implicit code can do a problem in much shorter time than the explicit code. The problem was, however, very unphysical, but it does demonstrate the potential of the implicit code. It is a first step toward a useful implicit SPH code.

  12. Development of Implicit and Explicit Category Learning (United States)

    Huang-Pollock, Cynthia L.; Maddox, W. Todd; Karalunas, Sarah L.


    We present two studies that examined developmental differences in the implicit and explicit acquisition of category knowledge. College-attending adults consistently outperformed school-age children on two separate information-integration paradigms due to children's more frequent use of an explicit rule-based strategy. Accuracy rates were also…

  13. Implicit and explicit instruction of spelling rules

    NARCIS (Netherlands)

    Kemper, M.J.; Verhoeven, L.T.W.; Bosman, A.M.T.


    The study aimed to compare the differential effectiveness of explicit and implicit instruction of two Dutch spelling rules. Students with and without spelling disabilities were instructed a spelling rule either implicitly or explicitly in two experiments. Effects were tested in a

  14. Implicit and Explicit Instruction of Spelling Rules (United States)

    Kemper, M. J.; Verhoeven, L.; Bosman, A. M. T.


    The study aimed to compare the differential effectiveness of explicit and implicit instruction of two Dutch spelling rules. Students with and without spelling disabilities were instructed a spelling rule either implicitly or explicitly in two experiments. Effects were tested in a pretest-intervention-posttest control group design. Experiment 1…

  15. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    Energy Technology Data Exchange (ETDEWEB)

    Adams, C. H.


    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center.

  16. Stable, high-order SBP-SAT finite difference operators to enable accurate simulation of compressible turbulent flows on curvilinear grids, with application to predicting turbulent jet noise (United States)

    Byun, Jaeseung; Bodony, Daniel; Pantano, Carlos


    Improved order-of-accuracy discretizations often require careful consideration of their numerical stability. We report on new high-order finite difference schemes using Summation-By-Parts (SBP) operators along with the Simultaneous-Approximation-Terms (SAT) boundary condition treatment for first and second-order spatial derivatives with variable coefficients. In particular, we present a highly accurate operator for SBP-SAT-based approximations of second-order derivatives with variable coefficients for Dirichlet and Neumann boundary conditions. These terms are responsible for approximating the physical dissipation of kinetic and thermal energy in a simulation, and contain grid metrics when the grid is curvilinear. Analysis using the Laplace transform method shows that strong stability is ensured with Dirichlet boundary conditions while weaker stability is obtained for Neumann boundary conditions. Furthermore, the benefits of the scheme is shown in the direct numerical simulation (DNS) of a Mach 1.5 compressible turbulent supersonic jet using curvilinear grids and skew-symmetric discretization. Particularly, we show that the improved methods allow minimization of the numerical filter often employed in these simulations and we discuss the qualities of the simulation.

  17. Effect of conduction band non-parabolicity on the optical gain of quantum cascade lasers based on the effective two-band finite difference method (United States)

    Cho, Gookbin; Kim, Jungho


    We theoretically investigate the effect of conduction band non-parabolicity (NPB) on the optical gain spectrum of quantum cascade lasers (QCLs) using the effective two-band finite difference method. Based on the effective two-band model to consider the NPB effect in the multiple quantum wells (QWs), the wave functions and confined energies of electron states are calculated in two different active-region structures, which correspond to three-QW single-phonon and four-QW double-phonon resonance designs. In addition, intersubband optical dipole moments and polar-optical-phonon scattering times are calculated and compared without and with the conduction band NPB effect. Finally, the calculation results of optical gain spectra are compared in the two QCL structures having the same peak gain wavelength of 8.55 μm. The gain peaks are greatly shifted to longer wavelengths and the overall gain magnitudes are slightly reduced when the NPB effect is considered. Compared with the three-QW active-region design, the redshift of the peak gain is more prominent in the four-QW active-region design, which makes use of higher electronic states for the lasing transition.

  18. Computational fluid dynamics and frequency-dependent finite-difference time-domain method coupling for the interaction between microwaves and plasma in rocket plumes

    Energy Technology Data Exchange (ETDEWEB)

    Kinefuchi, K. [Department of Aeronautics and Astronautics, University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-8656 (Japan); Funaki, I.; Shimada, T.; Abe, T. [Institute of Space and Astronautical Science, Japan Aerospace Exploration Agency, 3-1-1, Yoshinodai, Chuo-ku, Sagamihara, Kanagawa 252-5210 (Japan)


    Under certain conditions during rocket flights, ionized exhaust plumes from solid rocket motors may interfere with radio frequency transmissions. To understand the relevant physical processes involved in this phenomenon and establish a prediction process for in-flight attenuation levels, we attempted to measure microwave attenuation caused by rocket exhaust plumes in a sea-level static firing test for a full-scale solid propellant rocket motor. The microwave attenuation level was calculated by a coupling simulation of the inviscid-frozen-flow computational fluid dynamics of an exhaust plume and detailed analysis of microwave transmissions by applying a frequency-dependent finite-difference time-domain method with the Drude dispersion model. The calculated microwave attenuation level agreed well with the experimental results, except in the case of interference downstream the Mach disk in the exhaust plume. It was concluded that the coupling estimation method based on the physics of the frozen plasma flow with Drude dispersion would be suitable for actual flight conditions, although the mixing and afterburning in the plume should be considered depending on the flow condition.

  19. A mass-conservative adaptive FAS multigrid solver for cell-centered finite difference methods on block-structured, locally-cartesian grids (United States)

    Feng, Wenqiang; Guo, Zhenlin; Lowengrub, John S.; Wise, Steven M.


    We present a mass-conservative full approximation storage (FAS) multigrid solver for cell-centered finite difference methods on block-structured, locally cartesian grids. The algorithm is essentially a standard adaptive FAS (AFAS) scheme, but with a simple modification that comes in the form of a mass-conservative correction to the coarse-level force. This correction is facilitated by the creation of a zombie variable, analogous to a ghost variable, but defined on the coarse grid and lying under the fine grid refinement patch. We show that a number of different types of fine-level ghost cell interpolation strategies could be used in our framework, including low-order linear interpolation. In our approach, the smoother, prolongation, and restriction operations need never be aware of the mass conservation conditions at the coarse-fine interface. To maintain global mass conservation, we need only modify the usual FAS algorithm by correcting the coarse-level force function at points adjacent to the coarse-fine interface. We demonstrate through simulations that the solver converges geometrically, at a rate that is h-independent, and we show the generality of the solver, applying it to several nonlinear, time-dependent, and multi-dimensional problems. In several tests, we show that second-order asymptotic (h → 0) convergence is observed for the discretizations, provided that (1) at least linear interpolation of the ghost variables is employed, and (2) the mass conservation corrections are applied to the coarse-level force term.

  20. Study on Scattering and Absorption Properties of Quantum-Dot-Converted Elements for Light-Emitting Diodes Using Finite-Difference Time-Domain Method. (United States)

    Li, Jiasheng; Tang, Yong; Li, Zongtao; Ding, Xinrui; Yuan, Dong; Yu, Binhai


    CdSe/ZnS quantum-dot-converted elements (QDCEs) are good candidates for substituting rare-earth phosphor-converted elements (PCEs) in white light-emitting diodes (LEDs); however, studies on their scattering and absorption properties are scarce, suppressing further increment in the optical and thermal performance of quantum-dot-converted LEDs. Therefore, we introduce the finite-difference time-domain (FDTD) method to achieve the critical optical parameters of QDCEs when used in white LEDs; their scattering cross-section (coefficient), absorption cross-section (coefficient), and scattering phase distributions are presented and compared with those of traditional YAG phosphor-converted elements (PCEs) at varying particle size and concentration. At a commonly used concentration ( < 50 mg / cm 3 ), QDCEs exhibit stronger absorption (tens of millimeters, even for green-to-red-wavelength light) and weaker scattering ( < 1 mm - 1 ) compared to PCEs; the reabsorption, total internal reflection, angular uniformity, and thermal quenching would be more significant concerns for QDCEs. Therefore, the unique scattering and absorption properties of QDCEs should be considered when used in white LEDs. Furthermore, knowledge of these important optical parameters is helpful for beginning a theoretical study on quantum-dot-converted LEDs according to the ray tracing method.

  1. Study on Scattering and Absorption Properties of Quantum-Dot-Converted Elements for Light-Emitting Diodes Using Finite-Difference Time-Domain Method

    Directory of Open Access Journals (Sweden)

    Jiasheng Li


    Full Text Available CdSe/ZnS quantum-dot-converted elements (QDCEs are good candidates for substituting rare-earth phosphor-converted elements (PCEs in white light-emitting diodes (LEDs; however, studies on their scattering and absorption properties are scarce, suppressing further increment in the optical and thermal performance of quantum-dot-converted LEDs. Therefore, we introduce the finite-difference time-domain (FDTD method to achieve the critical optical parameters of QDCEs when used in white LEDs; their scattering cross-section (coefficient, absorption cross-section (coefficient, and scattering phase distributions are presented and compared with those of traditional YAG phosphor-converted elements (PCEs at varying particle size and concentration. At a commonly used concentration ( < 50 mg / cm 3 , QDCEs exhibit stronger absorption (tens of millimeters, even for green-to-red-wavelength light and weaker scattering ( < 1 mm − 1 compared to PCEs; the reabsorption, total internal reflection, angular uniformity, and thermal quenching would be more significant concerns for QDCEs. Therefore, the unique scattering and absorption properties of QDCEs should be considered when used in white LEDs. Furthermore, knowledge of these important optical parameters is helpful for beginning a theoretical study on quantum-dot-converted LEDs according to the ray tracing method.

  2. Numerical Simulation of Flows about a Stationary and a Free-Falling Cylinder Using Immersed Boundary-Finite Difference Lattice Boltzmann Method

    Directory of Open Access Journals (Sweden)

    Roberto Rojas


    Full Text Available The applicability of the immersed boundary-finite difference lattice Boltzmann method (IB-FDLBM to high Reynolds number flows about a circular cylinder is examined. Two-dimensional simulations of flows past a stationary circular cylinder are carried out for a wide range of the Reynolds number, Re, i.e., 1 ≤ Re ≤ 1×105. An immersed boundary-lattice Boltzmann method (IB-LBM is also used for comparison. Then free-falling circular cylinders are simulated to demonstrate the feasibility of predicting moving particles at high Reynolds numbers. The main conclusions obtained are as follows: (1 steady and unsteady flows about a stationary cylinder are well predicted with IB-LBM and IB-FDLBM, provided that the spatial resolution is high enough to satisfy the conditions of numerical stability, (2 high spatial resolution is required for stable IB-LBM simulation of high Reynolds number flows, (3 IB-FDLBM can stably simulate flows at very high Reynolds numbers without increasing the spatial resolution, (4 IB-FDLBM gives reasonable predictions of the drag coefficient for 1 ≤ Re ≤ 1×105, and (5 IB-FDLBM gives accurate predictions for the motion of free-falling cylinders at intermediate Reynolds numbers.

  3. Two-dimensional finite difference model to study temperature distribution in SST regions of human limbs immediately after physical exercise in cold climate (United States)

    Kumari, Babita; Adlakha, Neeru


    Thermoregulation is a complex mechanism regulating heat production within the body (chemical thermoregulation) and heat exchange between the body and the environment (physical thermoregulation) in such a way that the heat exchange is balanced and deep body temperatures are relatively stable. The external heat transfer mechanisms are radiation, conduction, convection and evaporation. The physical activity causes thermal stress and poses challenges for this thermoregulation. In this paper, a model has been developed to study temperature distribution in SST regions of human limbs immediately after physical exercise under cold climate. It is assumed that the subject is doing exercise initially and comes to rest at time t = 0. The human limb is assumed to be of cylindrical shape. The peripheral region of limb is divided into three natural components namely epidermis, dermis and subdermal tissues (SST). Appropriate boundary conditions have been framed based on the physical conditions of the problem. Finite difference has been employed for time, radial and angular variables. The numerical results have been used to obtain temperature profiles in the SST region immediately after continuous exercise for a two-dimensional unsteady state case. The results have been used to analyze the thermal stress in relation to light, moderate and vigorous intensity exercise.

  4. Sharing code. (United States)

    Kubilius, Jonas


    Sharing code is becoming increasingly important in the wake of Open Science. In this review I describe and compare two popular code-sharing utilities, GitHub and Open Science Framework (OSF). GitHub is a mature, industry-standard tool but lacks focus towards researchers. In comparison, OSF offers a one-stop solution for researchers but a lot of functionality is still under development. I conclude by listing alternative lesser-known tools for code and materials sharing.

  5. Evaluating the Effectiveness of Explicit Instruction on Implicit and Explicit L2 Knowledge (United States)

    Akakura, Motoko


    This study examined the effectiveness of explicit instruction on second language (L2) learners' implicit and explicit knowledge of English. Explicit instruction on the generic and non-generic use of English articles was delivered by CALL activities. Four tasks assessed acquisition: elicited imitation, oral production, grammaticality judgement, and…

  6. Analog Coding. (United States)


  7. (Almost) practical tree codes

    KAUST Repository

    Khina, Anatoly


    We consider the problem of stabilizing an unstable plant driven by bounded noise over a digital noisy communication link, a scenario at the heart of networked control. To stabilize such a plant, one needs real-time encoding and decoding with an error probability profile that decays exponentially with the decoding delay. The works of Schulman and Sahai over the past two decades have developed the notions of tree codes and anytime capacity, and provided the theoretical framework for studying such problems. Nonetheless, there has been little practical progress in this area due to the absence of explicit constructions of tree codes with efficient encoding and decoding algorithms. Recently, linear time-invariant tree codes were proposed to achieve the desired result under maximum-likelihood decoding. In this work, we take one more step towards practicality, by showing that these codes can be efficiently decoded using sequential decoding algorithms, up to some loss in performance (and with some practical complexity caveats). We supplement our theoretical results with numerical simulations that demonstrate the effectiveness of the decoder in a control system setting.

  8. Divergence coding for convolutional codes

    Directory of Open Access Journals (Sweden)

    Valery Zolotarev


    Full Text Available In the paper we propose a new coding/decoding on the divergence principle. A new divergent multithreshold decoder (MTD for convolutional self-orthogonal codes contains two threshold elements. The second threshold element decodes the code with the code distance one greater than for the first threshold element. Errorcorrecting possibility of the new MTD modification have been higher than traditional MTD. Simulation results show that the performance of the divergent schemes allow to approach area of its effective work to channel capacity approximately on 0,5 dB. Note that we include the enough effective Viterbi decoder instead of the first threshold element, the divergence principle can reach more. Index Terms — error-correcting coding, convolutional code, decoder, multithreshold decoder, Viterbi algorithm.

  9. Porting a Hall MHD Code to a Graphic Processing Unit (United States)

    Dorelli, John C.


    We present our experience porting a Hall MHD code to a Graphics Processing Unit (GPU). The code is a 2nd order accurate MUSCL-Hancock scheme which makes use of an HLL Riemann solver to compute numerical fluxes and second-order finite differences to compute the Hall contribution to the electric field. The divergence of the magnetic field is controlled with Dedner?s hyperbolic divergence cleaning method. Preliminary benchmark tests indicate a speedup (relative to a single Nehalem core) of 58x for a double precision calculation. We discuss scaling issues which arise when distributing work across multiple GPUs in a CPU-GPU cluster.

  10. Surface code implementation of block code state distillation (United States)

    Fowler, Austin G.; Devitt, Simon J.; Jones, Cody


    State distillation is the process of taking a number of imperfect copies of a particular quantum state and producing fewer better copies. Until recently, the lowest overhead method of distilling states produced a single improved |A〉 state given 15 input copies. New block code state distillation methods can produce k improved |A〉 states given 3k + 8 input copies, potentially significantly reducing the overhead associated with state distillation. We construct an explicit surface code implementation of block code state distillation and quantitatively compare the overhead of this approach to the old. We find that, using the best available techniques, for parameters of practical interest, block code state distillation does not always lead to lower overhead, and, when it does, the overhead reduction is typically less than a factor of three. PMID:23736868

  11. Explicit free‐floating beam element

    DEFF Research Database (Denmark)

    Nielsen, Martin Bjerre; Krenk, Steen


    A two‐node free‐floating beam element capable of undergoing arbitrary large displacements and finite rotations is presented in explicit form. The configuration of the beam in three‐dimensional space is represented by the global components of the position of the beam nodes and an associated set of...... interpolation of kinematic variables, resulting in a locking‐free formulation in terms of three explicit matrices. A set of classic benchmark examples illustrates excellent performance of the explicit beam element. Copyright © 2014 John Wiley & Sons, Ltd....

  12. Reflections on Codes of Conduct: Asymmetries, Vulnerabilities, and Institutional Controls (United States)

    Bray, Nathaniel J.; Braxton, John M.


    Codes of conduct can and should fulfill a critical role in higher education. Codes help overcome some of the challenges inherent in a system predicated on high levels of autonomy and on self-regulation. Codes not only are important indicators of critical topics that are deemed worthy of explicit protection or expectations for behavior; they may…

  13. Speaking Code

    DEFF Research Database (Denmark)

    Cox, Geoff

    Speaking Code begins by invoking the “Hello World” convention used by programmers when learning a new language, helping to establish the interplay of text and code that runs through the book. Interweaving the voice of critical writing from the humanities with the tradition of computing and software...... development, Speaking Code unfolds an argument to undermine the distinctions between criticism and practice, and to emphasize the aesthetic and political aspects of software studies. Not reducible to its functional aspects, program code mirrors the instability inherent in the relationship of speech......; alternatives to mainstream development, from performances of the live-coding scene to the organizational forms of commons-based peer production; the democratic promise of social media and their paradoxical role in suppressing political expression; and the market’s emptying out of possibilities for free...


    Directory of Open Access Journals (Sweden)

    Sebastián Otero G


    representa su capacidad de incorporar en el análisis el valor de la flexibilidad operativa del proyecto.In the past few years, real options, an extension of financial derivatives, have arisen as an alternative to traditional valuation methods, such as net present value (NPV. The key attribute of real options is that they take into consideration the uncertainty and flexibility involved in investment valuation. This article provides an overview of the finite difference method, by presenting an application to the real options valuation. The empirical section of the article, which makes use of the implicit finite difference method (IFD, analyzes the options of waiting, abandoning, contracting, expanding and switching, by valuing all the options involved and their possible combinations. The results are compared with those of the NPV method and the binomial tree with a logarithmic transformation (BTLT. Both methods (IFD and BTLT yield similar results, being both greater than those provided by the NPV. This difference comes to no surprise as it represents the value of the flexibility associated to an investment opportunity.

  15. Finite-Difference Modeling of Seismic Wave Scattering in 3D Heterogeneous Media: Generation of Tangential Motion from an Explosion Source (United States)

    Hirakawa, E. T.; Pitarka, A.; Mellors, R. J.


    Evan Hirakawa, Arben Pitarka, and Robert Mellors One challenging task in explosion seismology is development of physical models for explaining the generation of S-waves during underground explosions. Pitarka et al. (2015) used finite difference simulations of SPE-3 (part of Source Physics Experiment, SPE, an ongoing series of underground chemical explosions at the Nevada National Security Site) and found that while a large component of shear motion was generated directly at the source, additional scattering from heterogeneous velocity structure and topography are necessary to better match the data. Large-scale features in the velocity model used in the SPE simulations are well constrained, however, small-scale heterogeneity is poorly constrained. In our study we used a stochastic representation of small-scale variability in order to produce additional high-frequency scattering. Two methods for generating the distributions of random scatterers are tested. The first is done in the spatial domain by essentially smoothing a set of random numbers over an ellipsoidal volume using a Gaussian weighting function. The second method consists of filtering a set of random numbers in the wavenumber domain to obtain a set of heterogeneities with a desired statistical distribution (Frankel and Clayton, 1986). This method is capable of generating distributions with either Gaussian or von Karman autocorrelation functions. The key parameters that affect scattering are the correlation length, the standard deviation of velocity for the heterogeneities, and the Hurst exponent, which is only present in the von Karman media. Overall, we find that shorter correlation lengths as well as higher standard deviations result in increased tangential motion in the frequency band of interest (0 - 10 Hz). This occurs partially through S-wave refraction, but mostly by P-S and Rg-S waves conversions. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore

  16. MODFLOW–USG version 1: An unstructured grid version of MODFLOW for simulating groundwater flow and tightly coupled processes using a control volume finite-difference formulation (United States)

    Panday, Sorab; Langevin, Christian D.; Niswonger, Richard G.; Ibaraki, Motomu; Hughes, Joseph D.


    A new version of MODFLOW, called MODFLOW–USG (for UnStructured Grid), was developed to support a wide variety of structured and unstructured grid types, including nested grids and grids based on prismatic triangles, rectangles, hexagons, and other cell shapes. Flexibility in grid design can be used to focus resolution along rivers and around wells, for example, or to subdiscretize individual layers to better represent hydrostratigraphic units. MODFLOW–USG is based on an underlying control volume finite difference (CVFD) formulation in which a cell can be connected to an arbitrary number of adjacent cells. To improve accuracy of the CVFD formulation for irregular grid-cell geometries or nested grids, a generalized Ghost Node Correction (GNC) Package was developed, which uses interpolated heads in the flow calculation between adjacent connected cells. MODFLOW–USG includes a Groundwater Flow (GWF) Process, based on the GWF Process in MODFLOW–2005, as well as a new Connected Linear Network (CLN) Process to simulate the effects of multi-node wells, karst conduits, and tile drains, for example. The CLN Process is tightly coupled with the GWF Process in that the equations from both processes are formulated into one matrix equation and solved simultaneously. This robustness results from using an unstructured grid with unstructured matrix storage and solution schemes. MODFLOW–USG also contains an optional Newton-Raphson formulation, based on the formulation in MODFLOW–NWT, for improving solution convergence and avoiding problems with the drying and rewetting of cells. Because the existing MODFLOW solvers were developed for structured and symmetric matrices, they were replaced with a new Sparse Matrix Solver (SMS) Package developed specifically for MODFLOW–USG. The SMS Package provides several methods for resolving nonlinearities and multiple symmetric and asymmetric linear solution schemes to solve the matrix arising from the flow equations and the Newton

  17. Numerical modeling of CO2 sequestration inside a fracture in porous media based on space discretization by means of integral finite difference method (United States)

    Alizadeh Nomeli, M.; Riaz, A.


    Increasing concentration of CO2 as a greenhouse gas in the atmosphere causes global warming and it subsequently perturbs the balance of the life cycle. In order to mitigate the concentration of CO2 in the atmosphere, the sequestration of CO2 into deep geological formations has been investigated theoretically and experimentally in recent decades. Solubility and mineral trapping are the most promising long term solutions to geologic CO2 sequestration, because they prevent its return to the atmosphere. In this study, the CO2 sequestration capacity of both aqueous and mineral phases is evaluated. Mineral alterations, however, are too slow to be modeled experimentally; therefore a numerical model is required. This study presents a model to simulate a reactive fluid within permeable porous media. The problem contains reactive transport modeling between a miscible flow and minerals in post-injection regime. Rates of dissolution and precipitation (PD) of minerals are determined by taking into account the pH of the system, in addition to the consideration of the influence of temperature. We solve fluid convection, diffusion and PD reactions inside a fracture in order to predict the amount of CO2 that can be stored as precipitation of secondary carbonates after specific period of time. The modeling of flow and transport inside the fracture for the mineral trapping purpose is based on space discretization by means of integral finite differences. Dissolution and precipitation of all minerals in simulations presented in the current study are assumed to be kinetically controlled. Therefore the model can monitor changes in porosity and permeability during the simulation from changes in the volume of the fracture.

  18. Explicit equations of some elliptic modular surfaces

    NARCIS (Netherlands)

    Top, Jaap; Yui, Noriko


    We present explicit equations of semi-stable elliptic surfaces (i.e., having only type In singular fibers) which are associated to the torsion-free genus zero congruence subgroups of a modular group as previously classified.

  19. Validation issues for SSI codes

    Energy Technology Data Exchange (ETDEWEB)

    Philippacopoulos, A.J.


    The paper describes the results of a recent work which was performed to verify computer code predictions in the SSI area. The first part of the paper is concerned with analytic solutions of the system response. The mathematical derivations are reasonably reduced by the use of relatively simple models which capture fundamental ingredients of the physics of the system motion while allowing for the response to be obtained analytically. Having established explicit forms of the system response, numerical solutions from three computer codes are presented in comparative format.

  20. Explicit Instruction Elements in Core Reading Programs


    Child, Angela R.


    Classroom teachers are provided instructional recommendations for teaching reading from their adopted core reading programs (CRPs). Explicit instruction elements or what is also called instructional moves, including direct explanation, modeling, guided practice, independent practice, discussion, feedback, and monitoring, were examined within CRP reading lessons. This study sought to answer the question: What elements of explicit instruction or instructional moves are included in the five most...

  1. Topology Optimization using an Explicit Interface Representation

    DEFF Research Database (Denmark)

    Christiansen, Asger Nyman; Nobel-Jørgensen, Morten; Bærentzen, J. Andreas

    Current methods for topology optimization primarily represent the interface between solid and void implicitly on fixed grids. In contrast, shape optimization methods represent the interface explicitly, but do not allow for any topological changes to the structure. Using an explicit interface repr...... seconds on an ordinary laptop utilizing a single thread. In addition, a coarse solution to the same problem has been obtained in approximately 10 seconds....

  2. The TOUGH codes - a family of simulation tools for multiphase flowand transport processes in permeable media

    Energy Technology Data Exchange (ETDEWEB)

    Pruess, Karsten


    Numerical simulation has become a widely practiced andaccepted technique for studying flow and transport processes in thevadose zone and other subsurface flow systems. This article discusses asuite of codes, developed primarily at Lawrence Berkeley NationalLaboratory (LBNL), with the capability to model multiphase flows withphase change. We summarize history and goals in the development of theTOUGH codes, and present the governing equations for multiphase,multicomponent flow. Special emphasis is given to space discretization bymeans of integral finite differences (IFD). Issues of code implementationand architecture are addressed, as well as code applications,maintenance, and future developments.

  3. Explicit formulation of second and third order optical nonlinearity in the FDTD framework (United States)

    Varin, Charles; Emms, Rhys; Bart, Graeme; Fennel, Thomas; Brabec, Thomas


    The finite-difference time-domain (FDTD) method is a flexible and powerful technique for rigorously solving Maxwell's equations. However, three-dimensional optical nonlinearity in current commercial and research FDTD softwares requires solving iteratively an implicit form of Maxwell's equations over the entire numerical space and at each time step. Reaching numerical convergence demands significant computational resources and practical implementation often requires major modifications to the core FDTD engine. In this paper, we present an explicit method to include second and third order optical nonlinearity in the FDTD framework based on a nonlinear generalization of the Lorentz dispersion model. A formal derivation of the nonlinear Lorentz dispersion equation is equally provided, starting from the quantum mechanical equations describing nonlinear optics in the two-level approximation. With the proposed approach, numerical integration of optical nonlinearity and dispersion in FDTD is intuitive, transparent, and fully explicit. A strong-field formulation is also proposed, which opens an interesting avenue for FDTD-based modelling of the extreme nonlinear optics phenomena involved in laser filamentation and femtosecond micromachining of dielectrics.

  4. Meta-Analysis of Effects of Explicit Instruction for Critical Thinking. (United States)

    Bangert-Drowns, Robert L.; Bankert, Esther

    Study effect meta-analysis was used to synthesize the results of explicit instruction on critical thinking (CT). The approach involved the collection of 250 studies (books, articles, dissertations, and abstracts) from the ERIC database and "Dissertation Abstracts International", coding of the study features, calculation of effect sizes,…

  5. Coding Labour

    Directory of Open Access Journals (Sweden)

    Anthony McCosker


    Full Text Available As well as introducing the Coding Labour section, the authors explore the diffusion of code across the material contexts of everyday life, through the objects and tools of mediation, the systems and practices of cultural production and organisational management, and in the material conditions of labour. Taking code beyond computation and software, their specific focus is on the increasingly familiar connections between code and labour with a focus on the codification and modulation of affect through technologies and practices of management within the contemporary work organisation. In the grey literature of spreadsheets, minutes, workload models, email and the like they identify a violence of forms through which workplace affect, in its constant flux of crisis and ‘prodromal’ modes, is regulated and governed.

  6. Coding labour

    National Research Council Canada - National Science Library

    McCosker, Anthony; Milne, Esther


    ... software. Code encompasses the laws that regulate human affairs and the operation of capital, behavioural mores and accepted ways of acting, but it also defines the building blocks of life as DNA...

  7. Decoding Hermitian Codes with Sudan's Algorithm

    DEFF Research Database (Denmark)

    Høholdt, Tom; Nielsen, Rasmus Refslund


    We present an efficient implementation of Sudan's algorithm for list decoding Hermitian codes beyond half the minimum distance. The main ingredients are an explicit method to calculate so-called increasing zero bases, an efficient interpolation algorithm for finding the Q-polynomial, and a reduct......We present an efficient implementation of Sudan's algorithm for list decoding Hermitian codes beyond half the minimum distance. The main ingredients are an explicit method to calculate so-called increasing zero bases, an efficient interpolation algorithm for finding the Q...

  8. Causation, constructors and codes. (United States)

    Hofmeyr, Jan-Hendrik S


    Relational biology relies heavily on the enriched understanding of causal entailment that Robert Rosen's formalisation of Aristotle's four causes has made possible, although to date efficient causes and the rehabilitation of final cause have been its main focus. Formal cause has been paid rather scant attention, but, as this paper demonstrates, is crucial to our understanding of many types of processes, not necessarily biological. The graph-theoretic relational diagram of a mapping has played a key role in relational biology, and the first part of the paper is devoted to developing an explicit representation of formal cause in the diagram and how it acts in combination with efficient cause to form a mapping. I then use these representations to show how Von Neumann's universal constructor can be cast into a relational diagram in a way that avoids the logical paradox that Rosen detected in his own representation of the constructor in terms of sets and mappings. One aspect that was absent from both Von Neumann's and Rosen's treatments was the necessity of a code to translate the description (the formal cause) of the automaton to be constructed into the construction process itself. A formal definition of codes in general, and organic codes in particular, allows the relational diagram to be extended so as to capture this translation of formal cause into process. The extended relational diagram is used to exemplify causal entailment in a diverse range of processes, such as enzyme action, construction of automata, communication through the Morse code, and ribosomal polypeptide synthesis through the genetic code. Copyright © 2017 Elsevier B.V. All rights reserved.

  9. Construction of Capacity Achieving Lattice Gaussian Codes

    KAUST Repository

    Alghamdi, Wael


    We propose a new approach to proving results regarding channel coding schemes based on construction-A lattices for the Additive White Gaussian Noise (AWGN) channel that yields new characterizations of the code construction parameters, i.e., the primes and dimensions of the codes, as functions of the block-length. The approach we take introduces an averaging argument that explicitly involves the considered parameters. This averaging argument is applied to a generalized Loeliger ensemble [1] to provide a more practical proof of the existence of AWGN-good lattices, and to characterize suitable parameters for the lattice Gaussian coding scheme proposed by Ling and Belfiore [3].

  10. Analytical modeling, finite-difference simulation and experimental validation of air-coupled ultrasound beam refraction and damping through timber laminates, with application to non-destructive testing. (United States)

    Sanabria, Sergio J; Furrer, Roman; Neuenschwander, Jürg; Niemz, Peter; Schütz, Philipp


    Reliable non-destructive testing (NDT) ultrasound systems for timber composite structures require quantitative understanding of the propagation of ultrasound beams in wood. A finite-difference time-domain (FDTD) model is described, which incorporates local anisotropy variations of stiffness, damping and density in timber elements. The propagation of pulsed air-coupled ultrasound (ACU) beams in normal and slanted incidence configurations is reproduced by direct definition of material properties (gas, solid) at each model pixel. First, the model was quantitatively validated against analytical derivations. Time-varying wavefronts in unbounded timber with curved growth rings were accurately reproduced, as well as the acoustic properties (velocity, attenuation, beam skewing) of ACU beams transmitted through timber lamellas. An experimental sound field imaging (SFI) setup was implemented at NDT frequencies (120 kHz), which for specific beam incidence positions allows spatially resolved ACU field characterization at the receiver side. The good agreement of experimental and modeled beam shifts across timber laminates allowed extrapolation of the inner propagation paths. The modeling base is an orthotropic stiffness dataset for the desired wood species. In cross-grain planes, beam skewing leads to position-dependent wave paths. They are well-described in terms of the growth ring curvature, which is obtained by visual observation of the laminate. Extraordinary refraction phenomena were observed, which lead to well-collimated quasi-shear wave coupling at grazing beam incidence angles. The anisotropic damping in cross-grain planes is satisfactorily explained in terms of the known anisotropic stiffness dataset and a constant loss tangent. The incorporation of high-resolution density maps (X-ray computed tomography) provided insight into ultrasound scattering effects in the layered growth ring structure. Finally, the combined potential of the FDTD model and the SFI setup for

  11. A family of four stages embedded explicit six-step methods with eliminated phase-lag and its derivatives for the numerical solution of the second order problems (United States)

    Simos, T. E.


    A family of four stages high algebraic order embedded explicit six-step methods, for the numerical solution of second order initial or boundary-value problems with periodical and/or oscillating solutions, are studied in this paper. The free parameters of the new proposed methods are calculated solving the linear system of equations which is produced by requesting the vanishing of the phase-lag of the methods and the vanishing of the phase-lag's derivatives of the schemes. For the new obtained methods we investigate: • Its local truncation error (LTE) of the methods.• The asymptotic form of the LTE obtained using as model problem the radial Schrödinger equation.• The comparison of the asymptotic forms of LTEs for several methods of the same family. This comparison leads to conclusions on the efficiency of each method of the family.• The stability and the interval of periodicity of the obtained methods of the new family of embedded finite difference pairs.• The applications of the new obtained family of embedded finite difference pairs to the numerical solution of several second order problems like the radial Schrödinger equation, astronomical problems etc. The above applications lead to conclusion on the efficiency of the methods of the new family of embedded finite difference pairs.

  12. Minimal quadratic residue cyclic codes of length 2n

    National Research Council Canada - National Science Library

    Sudhir Batra; S K Arora


    ...: Formulae and/or non-USASCII text omitted; see image) has 2n primitive idempotents. The explicit expressions for these primitive idempotents are obtained and the minimal QR cyclic codes of length 2^sup n...

  13. Explicit Oral Narrative Intervention for Students with Williams Syndrome

    Directory of Open Access Journals (Sweden)

    Eliseo Diez-Itza


    Full Text Available Narrative skills play a crucial role in organizing experience, facilitating social interaction and building academic discourse and literacy. They are at the interface of cognitive, social, and linguistic abilities related to school engagement. Despite their relative strengths in social and grammatical skills, students with Williams syndrome (WS do not show parallel cognitive and pragmatic performance in narrative generation tasks. The aim of the present study was to assess retelling of a TV cartoon tale and the effect of an individualized explicit instruction of the narrative structure. Participants included eight students with WS who attended different special education levels. Narratives were elicited in two sessions (pre and post intervention, and were transcribed, coded and analyzed using the tools of the CHILDES Project. Narratives were coded for productivity and complexity at the microstructure and macrostructure levels. Microstructure productivity (i.e., length of narratives included number of utterances, clauses, and tokens. Microstructure complexity included mean length of utterances, lexical diversity and use of discourse markers as cohesive devices. Narrative macrostructure was assessed for textual coherence through the Pragmatic Evaluation Protocol for Speech Corpora (PREP-CORP. Macrostructure productivity and complexity included, respectively, the recall and sequential order of scenarios, episodes, events and characters. A total of four intervention sessions, lasting approximately 20 min, were delivered individually once a week. This brief intervention addressed explicit instruction about the narrative structure and the use of specific discourse markers to improve cohesion of story retellings. Intervention strategies included verbal scaffolding and modeling, conversational context for retelling the story and visual support with pictures printed from the cartoon. Results showed significant changes in WS students’ retelling of the

  14. Explicit Oral Narrative Intervention for Students with Williams Syndrome (United States)

    Diez-Itza, Eliseo; Martínez, Verónica; Pérez, Vanesa; Fernández-Urquiza, Maite


    Narrative skills play a crucial role in organizing experience, facilitating social interaction and building academic discourse and literacy. They are at the interface of cognitive, social, and linguistic abilities related to school engagement. Despite their relative strengths in social and grammatical skills, students with Williams syndrome (WS) do not show parallel cognitive and pragmatic performance in narrative generation tasks. The aim of the present study was to assess retelling of a TV cartoon tale and the effect of an individualized explicit instruction of the narrative structure. Participants included eight students with WS who attended different special education levels. Narratives were elicited in two sessions (pre and post intervention), and were transcribed, coded and analyzed using the tools of the CHILDES Project. Narratives were coded for productivity and complexity at the microstructure and macrostructure levels. Microstructure productivity (i.e., length of narratives) included number of utterances, clauses, and tokens. Microstructure complexity included mean length of utterances, lexical diversity and use of discourse markers as cohesive devices. Narrative macrostructure was assessed for textual coherence through the Pragmatic Evaluation Protocol for Speech Corpora (PREP-CORP). Macrostructure productivity and complexity included, respectively, the recall and sequential order of scenarios, episodes, events and characters. A total of four intervention sessions, lasting approximately 20 min, were delivered individually once a week. This brief intervention addressed explicit instruction about the narrative structure and the use of specific discourse markers to improve cohesion of story retellings. Intervention strategies included verbal scaffolding and modeling, conversational context for retelling the story and visual support with pictures printed from the cartoon. Results showed significant changes in WS students’ retelling of the story, both at

  15. The interaction of implicit learning, explicit hypothesis testing learning and implicit-to-explicit knowledge extraction. (United States)

    Sun, Ron; Zhang, Xi; Slusarz, Paul; Mathews, Robert


    To further explore the interaction between the implicit and explicit learning processes in skill acquisition (which have been tackled before, e.g. in [Sun, R., Merrill, E., & Peterson, T. (2001). From implicit skill to explicit knowledge: A bottom-up model of skill learning. Cognitive Science, 25(2), 203-244; Sun, R., Slusarz, P., & Terry, C. (2005). The interaction of the explicit and the implicit in skill learning: A dual-process approach. Psychological Review, 112(1), 159-192]), this paper explores details of the interaction of different learning modes: implicit learning, explicit hypothesis testing learning, and implicit-to-explicit knowledge extraction. Contrary to the common tendency in the literature to study each type of learning in isolation, this paper highlights the interaction among them and various effects of the interaction on learning, including the synergy effect. This work advocates an integrated model of skill learning that takes into account both implicit and explicit learning processes; moreover, it also uniquely embodies a bottom-up (implicit-to-explicit) learning approach in addition to other types of learning. The paper shows that this model accounts for various effects in the human behavioural data from the psychological experiments with the process control task, in addition to accounting for other data in other psychological experiments (which has been reported elsewhere). The paper shows that to account for these effects, implicit learning, bottom-up implicit-to-explicit extraction and explicit hypothesis testing learning are all needed.

  16. Efficiency of a model human image code (United States)

    Watson, Andrew B.


    Hypothetical schemes for neural representation of visual information can be expressed as explicit image codes. Here, a code modeled on the simple cells of the primate striate cortex is explored. The Cortex transform maps a digital image into a set of subimages (layers) that are bandpass in spatial frequency and orientation. The layers are sampled so as to minimize the number of samples and still avoid aliasing. Samples are quantized in a manner that exploits the bandpass contrast-masking properties of human vision. The entropy of the samples is computed to provide a lower bound on the code size. Finally, the image is reconstructed from the code. Psychophysical methods are derived for comparing the original and reconstructed images to evaluate the sufficiency of the code. When each resolution is coded at the threshold for detection artifacts, the image-code size is about 1 bit/pixel.

  17. Genetic code, hamming distance and stochastic matrices. (United States)

    He, Matthew X; Petoukhov, Sergei V; Ricci, Paolo E


    In this paper we use the Gray code representation of the genetic code C=00, U=10, G=11 and A=01 (C pairs with G, A pairs with U) to generate a sequence of genetic code-based matrices. In connection with these code-based matrices, we use the Hamming distance to generate a sequence of numerical matrices. We then further investigate the properties of the numerical matrices and show that they are doubly stochastic and symmetric. We determine the frequency distributions of the Hamming distances, building blocks of the matrices, decomposition and iterations of matrices. We present an explicit decomposition formula for the genetic code-based matrix in terms of permutation matrices, which provides a hypercube representation of the genetic code. It is also observed that there is a Hamiltonian cycle in a genetic code-based hypercube.

  18. A comprehensive model combining Laplace-transform finite-difference and boundary-element method for the flow behavior of a two-zone system with discrete fracture network (United States)

    Jia, Pin; Cheng, Linsong; Huang, Shijun; Xu, Zhongyi; Xue, Yongchao; Cao, Renyi; Ding, Guanyang


    This paper provides a comprehensive model for the flow behavior of a two-zone system with discrete fracture network. The discrete fracture network within the inner zone is represented explicitly by fracture segments. The Laplace-transform finite-difference method is used to numerically model discrete fracture network flow, with sufficient flexibility to consider arbitrary fracture geometries and conductivity distributions. Boundary-element method and line-source functions in the Laplace domain are employed to derive a semi-analytical flow solution for the two-zone system. By imposing the continuity of flux and pressure on discrete fracture surfaces, the semi-analytical two-zone system flow model and the numerical fracture flow model are coupled dynamically. The main advantage of the approach occurring in the Laplace domain is that simulation can be done with nodes only for discrete fractures and elements for boundaries and at predetermined, discrete times. Thus, stability and convergence problems caused by time discretization are avoided and the burden of gridding and computation is decreased without loss of important fracture characteristics. The model is validated by comparison with the results from an analytical solution and a fully numerical solution. Flow regime analysis shows that a two-zone system with discrete fracture network may develop six flow regimes: fracture linear flow, bilinear flow, inner zone linear flow, inner zone pseudosteady-state flow, outer zone pseudoradial flow and outer zone boundary-dominated flow. Especially, local solutions for the inner-zone linear flow have the same form with that of a finite conductivity planar fracture and can be correlated with the total length of discrete fractures and an intercept term. In the inner zone pseudosteady-state flow period, the discrete fractures, along with the boundary of the inner zone, will act as virtual closed boundaries, due to the pressure interference caused by fracture network and the

  19. Speech coding

    Energy Technology Data Exchange (ETDEWEB)

    Ravishankar, C., Hughes Network Systems, Germantown, MD


    Speech is the predominant means of communication between human beings and since the invention of the telephone by Alexander Graham Bell in 1876, speech services have remained to be the core service in almost all telecommunication systems. Original analog methods of telephony had the disadvantage of speech signal getting corrupted by noise, cross-talk and distortion Long haul transmissions which use repeaters to compensate for the loss in signal strength on transmission links also increase the associated noise and distortion. On the other hand digital transmission is relatively immune to noise, cross-talk and distortion primarily because of the capability to faithfully regenerate digital signal at each repeater purely based on a binary decision. Hence end-to-end performance of the digital link essentially becomes independent of the length and operating frequency bands of the link Hence from a transmission point of view digital transmission has been the preferred approach due to its higher immunity to noise. The need to carry digital speech became extremely important from a service provision point of view as well. Modem requirements have introduced the need for robust, flexible and secure services that can carry a multitude of signal types (such as voice, data and video) without a fundamental change in infrastructure. Such a requirement could not have been easily met without the advent of digital transmission systems, thereby requiring speech to be coded digitally. The term Speech Coding is often referred to techniques that represent or code speech signals either directly as a waveform or as a set of parameters by analyzing the speech signal. In either case, the codes are transmitted to the distant end where speech is reconstructed or synthesized using the received set of codes. A more generic term that is applicable to these techniques that is often interchangeably used with speech coding is the term voice coding. This term is more generic in the sense that the

  20. Brain Networks of Explicit and Implicit Learning (United States)

    Yang, Jing; Li, Ping


    Are explicit versus implicit learning mechanisms reflected in the brain as distinct neural structures, as previous research indicates, or are they distinguished by brain networks that involve overlapping systems with differential connectivity? In this functional MRI study we examined the neural correlates of explicit and implicit learning of artificial grammar sequences. Using effective connectivity analyses we found that brain networks of different connectivity underlie the two types of learning: while both processes involve activation in a set of cortical and subcortical structures, explicit learners engage a network that uses the insula as a key mediator whereas implicit learners evoke a direct frontal-striatal network. Individual differences in working memory also differentially impact the two types of sequence learning. PMID:22952624

  1. Effect of phosphatidylcholine on explicit memory. (United States)

    Ladd, S L; Sommer, S A; LaBerge, S; Toscano, W


    Previous studies have not demonstrated a consistent relationship between precursors to acetylcholine (ACh) and memory function in normal human subjects. This experiment (N = 80, college students) employed a double-blind mixed design to test the effect of phosphatidylcholine (PCh) on explicit memory. Dose of placebo and PCh was compared at two levels (10 and 25 g) as was time of testing postingestion (60 and 90 min). With 25 g of PCh, which supplies 3.75 g of choline, significant improvement in explicit memory, as measured by a serial learning task, was observed at 90 min postingestion and slight improvement was observed at 60 min postigestion. Further analyses indicated that this improvement may have been due to the responses of slow learners. This is the first study to test the relationship between a single dose of PCh and explicit memory on normal human subjects.

  2. Implicit and explicit processes in social cognition

    DEFF Research Database (Denmark)

    Frith, Christopher; Frith, Uta


    In this review we consider research on social cognition in which implicit processes can be compared and contrasted with explicit, conscious processes. In each case, their function is distinct, sometimes complementary and sometimes oppositional. We argue that implicit processes in social interaction...... are automatic and are often opposed to conscious strategies. While we are aware of explicit processes in social interaction, we cannot always use them to override implicit processes. Many studies show that implicit processes facilitate the sharing of knowledge, feelings, and actions, and hence, perhaps...

  3. New explicit expressions for Dirac bilinears (United States)

    Lorcé, Cédric


    We derive new explicit expressions for the Dirac bilinears based on a generic representation of the massive Dirac spinors with canonical polarization. These bilinears depend on a direction n in Minkowski space which specifies the form of dynamics. We argue that such a dependence is unavoidable in a relativistic theory with spin, since it originates from Wigner rotation effects. Contrary to most of the expressions found in the literature, ours are valid for all momenta and canonical polarizations of the spinors. As a byproduct, we also obtain a generic explicit expression for the covariant spin vector.

  4. Electromagnetic radiation under explicit symmetry breaking. (United States)

    Sinha, Dhiraj; Amaratunga, Gehan A J


    We report our observation that radiation from a system of accelerating charges is possible only when there is explicit breaking of symmetry in the electric field in space within the spatial configuration of the radiating system. Under symmetry breaking, current within an enclosed area around the radiating structure is not conserved at a certain instant of time resulting in radiation in free space. Electromagnetic radiation from dielectric and piezoelectric material based resonators are discussed in this context. Finally, it is argued that symmetry of a resonator of any form can be explicitly broken to create a radiating antenna.

  5. The Aster code; Code Aster

    Energy Technology Data Exchange (ETDEWEB)

    Delbecq, J.M


    The Aster code is a 2D or 3D finite-element calculation code for structures developed by the R and D direction of Electricite de France (EdF). This dossier presents a complete overview of the characteristics and uses of the Aster code: introduction of version 4; the context of Aster (organisation of the code development, versions, systems and interfaces, development tools, quality assurance, independent validation); static mechanics (linear thermo-elasticity, Euler buckling, cables, Zarka-Casier method); non-linear mechanics (materials behaviour, big deformations, specific loads, unloading and loss of load proportionality indicators, global algorithm, contact and friction); rupture mechanics (G energy restitution level, restitution level in thermo-elasto-plasticity, 3D local energy restitution level, KI and KII stress intensity factors, calculation of limit loads for structures), specific treatments (fatigue, rupture, wear, error estimation); meshes and models (mesh generation, modeling, loads and boundary conditions, links between different modeling processes, resolution of linear systems, display of results etc..); vibration mechanics (modal and harmonic analysis, dynamics with shocks, direct transient dynamics, seismic analysis and aleatory dynamics, non-linear dynamics, dynamical sub-structuring); fluid-structure interactions (internal acoustics, mass, rigidity and damping); linear and non-linear thermal analysis; steels and metal industry (structure transformations); coupled problems (internal chaining, internal thermo-hydro-mechanical coupling, chaining with other codes); products and services. (J.S.)

  6. Network Coding

    Indian Academy of Sciences (India)

    Network coding is a technique to increase the amount of information °ow in a network by mak- ing the key observation that information °ow is fundamentally different from commodity °ow. Whereas, under traditional methods of opera- tion of data networks, intermediate nodes are restricted to simply forwarding their incoming.

  7. Coding Class

    DEFF Research Database (Denmark)

    Ejsing-Duun, Stine; Hansbøl, Mikala

    Denne rapport rummer evaluering og dokumentation af Coding Class projektet1. Coding Class projektet blev igangsat i skoleåret 2016/2017 af IT-Branchen i samarbejde med en række medlemsvirksomheder, Københavns kommune, Vejle Kommune, Styrelsen for IT- og Læring (STIL) og den frivillige forening...... Coding Pirates2. Rapporten er forfattet af Docent i digitale læringsressourcer og forskningskoordinator for forsknings- og udviklingsmiljøet Digitalisering i Skolen (DiS), Mikala Hansbøl, fra Institut for Skole og Læring ved Professionshøjskolen Metropol; og Lektor i læringsteknologi, interaktionsdesign......, design tænkning og design-pædagogik, Stine Ejsing-Duun fra Forskningslab: It og Læringsdesign (ILD-LAB) ved Institut for kommunikation og psykologi, Aalborg Universitet i København. Vi har fulgt og gennemført evaluering og dokumentation af Coding Class projektet i perioden november 2016 til maj 2017...

  8. Network Coding

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 15; Issue 7. Network Coding. K V Rashmi Nihar B Shah P Vijay Kumar. General Article Volume 15 Issue 7 July 2010 pp 604-621. Fulltext. Click here to view fulltext PDF. Permanent link: Keywords.

  9. Expander Codes

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 10; Issue 1. Expander Codes - The Sipser–Spielman Construction. Priti Shankar. General Article Volume 10 ... Author Affiliations. Priti Shankar1. Department of Computer Science and Automation, Indian Institute of Science Bangalore 560 012, India.

  10. Explicit Instruction Elements in Core Reading Programs (United States)

    Child, Angela R.


    Classroom teachers are provided instructional recommendations for teaching reading from their adopted core reading programs (CRPs). Explicit instruction elements or what is also called instructional moves, including direct explanation, modeling, guided practice, independent practice, discussion, feedback, and monitoring, were examined within CRP…

  11. Sexually explicit media use and relationship satisfaction

    DEFF Research Database (Denmark)

    Veit, Maria; Stulhofer, Aleksandar; Hald, Gert Martin


    Using a cross-sectional questionnaire design and a sample of 2284 coupled Croatian adults, this study investigated the association between Sexually Explicit Media (SEM) use and relationship satisfaction. Further, possible moderation of emotional intimacy on the relationship between SEM use and re...

  12. Uncertainty in spatially explicit animal dispersal models (United States)

    Mooij, Wolf M.; DeAngelis, Donald L.


    Uncertainty in estimates of survival of dispersing animals is a vexing difficulty in conservation biology. The current notion is that this uncertainty decreases the usefulness of spatially explicit population models in particular. We examined this problem by comparing dispersal models of three levels of complexity: (1) an event-based binomial model that considers only the occurrence of mortality or arrival, (2) a temporally explicit exponential model that employs mortality and arrival rates, and (3) a spatially explicit grid-walk model that simulates the movement of animals through an artificial landscape. Each model was fitted to the same set of field data. A first objective of the paper is to illustrate how the maximum-likelihood method can be used in all three cases to estimate the means and confidence limits for the relevant model parameters, given a particular set of data on dispersal survival. Using this framework we show that the structure of the uncertainty for all three models is strikingly similar. In fact, the results of our unified approach imply that spatially explicit dispersal models, which take advantage of information on landscape details, suffer less from uncertainly than do simpler models. Moreover, we show that the proposed strategy of model development safeguards one from error propagation in these more complex models. Finally, our approach shows that all models related to animal dispersal, ranging from simple to complex, can be related in a hierarchical fashion, so that the various approaches to modeling such dispersal can be viewed from a unified perspective.

  13. Refinement of protein structures in explicit solvent

    NARCIS (Netherlands)

    Linge, J.P.; Williams, M.A.; Spronk, C.A.E.M.; Bonvin, A.M.J.J.|info:eu-repo/dai/nl/113691238; Nilges, M.


    We present a CPU efficient protocol for refinement of protein structures in a thin layer of explicit solvent and energy parameters with completely revised dihedral angle terms. Our approach is suitable for protein structures determined by theoretical (e.g., homology modeling or threading) or

  14. Antichrist, Explicit Sex, Anxiety, and Care

    DEFF Research Database (Denmark)

    Grodal, Torben Kragh


    The article analyzes how von Trier's Antichrist uses explicit sex to discuss the relation between fear of human embodiment and a longing for care and spiritual intimacy. It discusses how lyrical episodes contrasts descriptions of embodied degradation and experiences of being imprisoned in the body....

  15. Explicit and implicit assessment of gender roles. (United States)

    Fernández, Juan; Quiroga, M Ángeles; Escorial, Sergio; Privado, Jesús


    Gender roles have been assessed by explicit measures and, recently, by implicit measures. In the former case, the theoretical assumptions have been questioned by empirical results. To solve this contradiction, we carried out two concatenated studies based on a relatively well-founded theoretical and empirical approach. The first study was designed to obtain a sample of genderized activities of the domestic sphere by means of an explicit assessment. Forty-two raters (22 women and 20 men, balanced on age, sex, and level of education) took part as raters. In the second study, an implicit assessment of gender roles was carried out, focusing on the response time given to the sample activities obtained from the first study. A total of 164 adults (90 women and 74 men, mean age = 43), with experience in living with a partner and balanced on age, sex, and level of education, participated. Taken together, results show that explicit and implicit assessment converge. The current social reality shows that there is still no equity in some gender roles in the domestic sphere. These consistent results show considerable theoretical and empirical robustness, due to the double implicit and explicit assessment.

  16. Implicit and explicit prejudice and interracial interaction

    NARCIS (Netherlands)

    Dovidio, J.F.; Kawakami, K.L.; Gaertner, S.L.


    The present research examined how implicit racial associations and explicit racial attitudes of Whites relate to behaviors and impressions in interracial interactions, Specifically, the authors examined how response latency and self-report measures predicted bias and perceptions of bias in verbal

  17. Orchestrating Semiotic Resources in Explicit Strategy Instruction (United States)

    Shanahan, Lynn E.; Flury-Kashmanian, Caroline


    Research and pedagogical information provided to teachers on implementing explicit strategy instruction has primarily focused on teachers' speech, with limited attention to other modes of communication, such as gesture and artefacts. This interpretive case study investigates two teachers' use of different semiotic resources when introducing…

  18. Sleep Enhances Explicit Recollection in Recognition Memory (United States)

    Drosopoulos, Spyridon; Wagner, Ullrich; Born, Jan


    Recognition memory is considered to be supported by two different memory processes, i.e., the explicit recollection of information about a previous event and an implicit process of recognition based on a contextual sense of familiarity. Both types of memory supposedly rely on distinct memory systems. Sleep is known to enhance the consolidation of…

  19. George Gamow and the Genetic Code

    Indian Academy of Sciences (India)

    and most famous, paper, "A Structure for Deoxyribose Nucleic. Acid". In it they ... quantum mechanics and nuclear physics, especially for a bril- liant explanation of ... a Genetic Code, that would relate the hereditary information carried in DNA to the stuff that built bodies, proteins. Schrodinger used the explicit example of the.

  20. The 2002 Revision of the American Psychological Association's Ethics Code: Implications for School Psychologists (United States)

    Flanagan, Rosemary; Miller, Jeffrey A.; Jacob, Susan


    The Ethical Principles for Psychologists and Code of Conduct has been recently revised. The organization of the code changed, and the language was made more specific. A number of points relevant to school psychology are explicitly stated in the code. A clear advantage of including these items in the code is the assistance to school psychologists…

  1. Localized solutions for the finite difference semi-discretization of the wave equation [Solutions localisées pour la semi-discrétisation par différences finies de l'équation des ondes


    Marica, Aurora; Zuazua, Enrique


    We study the propagation properties of the solutions of the finite difference space semi-discrete wave equation on a uniform grid of the whole Euclidean space. We provide a construction of high frequency wave packets that propagate along the corresponding bi-characteristic rays of Geometric Optics with a group velocity arbitrarily close to zero. Our analysis is motivated by control theoretical issues. In particular, the continuous wave equation has the so-called observability property: for a ...

  2. Analysis of the KUCA MEU experiments using the ANL code system

    Energy Technology Data Exchange (ETDEWEB)

    Shiroya, S.; Hayashi, M.; Kanda, K.; Shibata, T.; Woodruff, W.L.; Matos, J.E.


    This paper provides some preliminary results on the analysis of the KUCA critical experiments using the ANL code system. Since this system was employed in the earlier neutronics calculations for the KUHFR, it is important to assess its capabilities for the KUHFR. The KUHFR has a unique core configuration which is difficult to model precisely with current diffusion theory codes. This paper also provides some results from a finite-element diffusion code (2D-FEM-KUR), which was developed in a cooperative research program between KURRI and JAERI. This code provides the capability for mockup of a complex core configuration as the KUHFR. Using the same group constants generated by the EPRI-CELL code, the results of the 2D-FEM-KUR code are compared with the finite difference diffusion code (DIF3D(2D) which is mainly employed in this analysis.

  3. Polar Codes (United States)


    added by the decoder is K/ρ+Td. By the last assumption, Td and Te are both ≤ K/ρ, so the total latency added is between 2K/ρ and 4K /ρ. For example...better resolution near the decision point. Reference [12] showed that in decoding a (1024, 512) polar code, using 6-bit LLRs resulted in per- formance

  4. Turbo coding, turbo equalisation and space-time coding for transmission over fading channels

    CERN Document Server

    Hanzo, L; Yeap, B


    Against the backdrop of the emerging 3G wireless personal communications standards and broadband access network standard proposals, this volume covers a range of coding and transmission aspects for transmission over fading wireless channels. It presents the most important classic channel coding issues and also the exciting advances of the last decade, such as turbo coding, turbo equalisation and space-time coding. It endeavours to be the first book with explicit emphasis on channel coding for transmission over wireless channels. Divided into 4 parts: Part 1 - explains the necessary background for novices. It aims to be both an easy reading text book and a deep research monograph. Part 2 - provides detailed coverage of turbo conventional and turbo block coding considering the known decoding algorithms and their performance over Gaussian as well as narrowband and wideband fading channels. Part 3 - comprehensively discusses both space-time block and space-time trellis coding for the first time in literature. Par...

  5. Convolutional-Code-Specific CRC Code Design


    Lou, Chung-Yu; Daneshrad, Babak; Wesel, Richard D.


    Cyclic redundancy check (CRC) codes check if a codeword is correctly received. This paper presents an algorithm to design CRC codes that are optimized for the code-specific error behavior of a specified feedforward convolutional code. The algorithm utilizes two distinct approaches to computing undetected error probability of a CRC code used with a specific convolutional code. The first approach enumerates the error patterns of the convolutional code and tests if each of them is detectable. Th...

  6. Explicit formulas for regularized products and series

    CERN Document Server

    Jorgenson, Jay; Goldfeld, Dorian


    The theory of explicit formulas for regularized products and series forms a natural continuation of the analytic theory developed in LNM 1564. These explicit formulas can be used to describe the quantitative behavior of various objects in analytic number theory and spectral theory. The present book deals with other applications arising from Gaussian test functions, leading to theta inversion formulas and corresponding new types of zeta functions which are Gaussian transforms of theta series rather than Mellin transforms, and satisfy additive functional equations. Their wide range of applications includes the spectral theory of a broad class of manifolds and also the theory of zeta functions in number theory and representation theory. Here the hyperbolic 3-manifolds are given as a significant example.

  7. Implicit and explicit memory bias in anxiety. (United States)

    Mathews, A; Mogg, K; May, J; Eysenck, M


    Previous investigations of recall and recognition for threatening information in clinically anxious subjects have yielded equivocal results. The present study contrasts implicit (word completion) with explicit (cued recall) memory and shows that indices of bias for emotional material derived from the two types of memory are independent of one another. The explicit measure was correlated with trait anxiety scores, but did not clearly distinguish between subjects with clinical anxiety states and normal control subjects. On the implicit memory measure, clinically anxious subjects produced more threat word completions, but only from a set to which they had recently been exposed. These results are taken as evidence that internal representations of threat words are more readily or more persistently activated in anxiety states, although they are not necessarily better elaborated.

  8. Diletter circular codes over finite alphabets. (United States)

    Fimmel, Elena; Michel, Christian J; Strüngmann, Lutz


    The graph approach of circular codes recently developed (Fimmel et al.,2016) allows here a detailed study of diletter circular codes over finite alphabets. A new class of circular codes is identified, strong comma-free codes. New theorems are proved with the diletter circular codes of maximal length in relation to (i) a characterisation of their graphs as acyclic tournaments; (ii) their explicit description; and (iii) the non-existence of other maximal diletter circular codes. The maximal lengths of paths in the graphs of the comma-free and strong comma-free codes are determined. Furthermore, for the first time, diletter circular codes are enumerated over finite alphabets. Biological consequences of dinucleotide circular codes are analysed with respect to their embedding in the trinucleotide circular code X identified in genes and to the periodicity modulo 2 observed in introns. An evolutionary hypothesis of circular codes is also proposed according to their combinatorial properties. Copyright © 2017. Published by Elsevier Inc.

  9. Isogeometric Collocation for Elastostatics and Explicit Dynamics (United States)


    of stresses at quadrature points. In this case, storage and compute cost are directly pro- portional to the number of quadrature points. Typical...that is, the one-point Gauss rule. This minimizes storage of stresses and the number of constitutive evaluations and results in an efficient...We confirm the higher-order con- vergence rates of the explicit multi-corrector method on a one-dimensional example and a two dimensional plane strain

  10. Sleep enhances explicit recollection in recognition memory


    Drosopoulos, Spyridon; Wagner, Ullrich; Born, Jan


    Recognition memory is considered to be supported by two different memory processes, i.e., the explicit recollection of information about a previous event and an implicit process of recognition based on an acontextual sense of familiarity. Both types of memory supposedly rely on distinct memory systems. Sleep is known to enhance the consolidation of memories, with the different sleep stages affecting different types of memory. In the present study, we used the process-dissociation procedure to...

  11. Towards an explicit account of implicit learning. (United States)

    Forkstam, Christian; Petersson, Karl Magnus


    The human brain supports acquisition mechanisms that can extract structural regularities implicitly from experience without the induction of an explicit model. Reber defined the process by which an individual comes to respond appropriately to the statistical structure of the input ensemble as implicit learning. He argued that the capacity to generalize to new input is based on the acquisition of abstract representations that reflect underlying structural regularities in the acquisition input. We focus this review of the implicit learning literature on studies published during 2004 and 2005. We will not review studies of repetition priming ('implicit memory'). Instead we focus on two commonly used experimental paradigms: the serial reaction time task and artificial grammar learning. Previous comprehensive reviews can be found in Seger's 1994 article and the Handbook of Implicit Learning. Emerging themes include the interaction between implicit and explicit processes, the role of the medial temporal lobe, developmental aspects of implicit learning, age-dependence, the role of sleep and consolidation. The attempts to characterize the interaction between implicit and explicit learning are promising although not well understood. The same can be said about the role of sleep and consolidation. Despite the fact that lesion studies have relatively consistently suggested that the medial temporal lobe memory system is not necessary for implicit learning, a number of functional magnetic resonance studies have reported medial temporal lobe activation in implicit learning. This issue merits further research. Finally, the clinical relevance of implicit learning remains to be determined.

  12. Intersection Type Systems and Explicit Substitutions Calculi (United States)

    Ventura, Daniel Lima; Ayala-Rincón, Mauricio; Kamareddine, Fairouz

    The λ-calculus with de Bruijn indices, called λ dB , assembles each α-class of λ-terms into a unique term, using indices instead of variable names. Intersection types provide finitary type polymorphism satisfying important properties like principal typing, which allows the type system to include features such as data abstraction (modularity) and separate compilation. To be closer to computation and to simplify the formalisation of the atomic operations involved in β-contractions, several explicit substitution calculi were developed most of which are written with de Bruijn indices. Although untyped and simply types versions of explicit substitution calculi are well investigated, versions with more elaborate type systems (e.g., with intersection types) are not. In previous work, we presented a version for λ dB of an intersection type system originally introduced to characterise principal typings for β-normal forms and provided the characterisation for this version. In this work we introduce intersection type systems for two explicit substitution calculi: the λσ and the λs e . These type system are based on a type system for λ dB and satisfy the basic property of subject reduction, which guarantees the preservation of types during computations.

  13. Age effects on explicit and implicit memory

    Directory of Open Access Journals (Sweden)

    Emma eWard


    Full Text Available It is well documented that explicit memory (e.g., recognition declines with age. In contrast, many argue that implicit memory (e.g., priming is preserved in healthy aging. For example, priming on tasks such as perceptual identification is often not statistically different in groups of young and older adults. Such observations are commonly taken as evidence for distinct explicit and implicit learning/memory systems. In this article we discuss several lines of evidence that challenge this view. We describe how patterns of differential age-related decline may arise from differences in the ways in which the two forms of memory are commonly measured, and review recent research suggesting that under improved measurement methods, implicit memory is not age-invariant. Formal computational models are of considerable utility in revealing the nature of underlying systems. We report the results of applying single and multiple-systems models to data on age effects in implicit and explicit memory. Model comparison clearly favours the single-system view. Implications for the memory systems debate are discussed.

  14. Automatic differentiation of codes in nuclear engineering applications.

    Energy Technology Data Exchange (ETDEWEB)

    Alexe, M.; Roderick, O.; Utke, J.; Anitescu, M.; Hovland, P.; Fanning, T.; Virginia Polytechnic Inst. and State Univ.; Unv. of Chicago


    We discuss our experience in applying automatic differentiation (AD) to calculations in nuclear reactor applications. The document is intended as a guideline on how to apply AD to Fortran codes with significant legacy components; it is also a part of a larger research effort in uncertainty quantification using sampling methods augmented with derivative information. We provide a brief theoretical description of the concept of AD, explain the necessary changes in the code structure, and remark on possible ways to deal with non-differentiability. Numerical experiments were carried out where the derivative of a functional subset of the SAS4A/SASSYS code was computed in forward mode with several AD tools. The results are in good agreement with both the real and complex finite-difference approximations of the derivative.


    Energy Technology Data Exchange (ETDEWEB)

    Poole, B R; Nelson, S D; Langdon, S


    The modeling of dielectric and magnetic materials in the time domain is required for pulse power applications, pulsed induction accelerators, and advanced transmission lines. For example, most induction accelerator modules require the use of magnetic materials to provide adequate Volt-sec during the acceleration pulse. These models require hysteresis and saturation to simulate the saturation wavefront in a multipulse environment. In high voltage transmission line applications such as shock or soliton lines the dielectric is operating in a highly nonlinear regime, which require nonlinear models. Simple 1-D models are developed for fast parameterization of transmission line structures. In the case of nonlinear dielectrics, a simple analytic model describing the permittivity in terms of electric field is used in a 3-D finite difference time domain code (FDTD). In the case of magnetic materials, both rate independent and rate dependent Hodgdon magnetic material models have been implemented into 3-D FDTD codes and 1-D codes.

  16. FDNS CFD Code Benchmark for RBCC Ejector Mode Operation (United States)

    Holt, James B.; Ruf, Joe


    Computational Fluid Dynamics (CFD) analysis results are compared with benchmark quality test data from the Propulsion Engineering Research Center's (PERC) Rocket Based Combined Cycle (RBCC) experiments to verify fluid dynamic code and application procedures. RBCC engine flowpath development will rely on CFD applications to capture the multi-dimensional fluid dynamic interactions and to quantify their effect on the RBCC system performance. Therefore, the accuracy of these CFD codes must be determined through detailed comparisons with test data. The PERC experiments build upon the well-known 1968 rocket-ejector experiments of Odegaard and Stroup by employing advanced optical and laser based diagnostics to evaluate mixing and secondary combustion. The Finite Difference Navier Stokes (FDNS) code was used to model the fluid dynamics of the PERC RBCC ejector mode configuration. Analyses were performed for both Diffusion and Afterburning (DAB) and Simultaneous Mixing and Combustion (SMC) test conditions. Results from both the 2D and the 3D models are presented.

  17. From concatenated codes to graph codes

    DEFF Research Database (Denmark)

    Justesen, Jørn; Høholdt, Tom


    We consider codes based on simple bipartite expander graphs. These codes may be seen as the first step leading from product type concatenated codes to more complex graph codes. We emphasize constructions of specific codes of realistic lengths, and study the details of decoding by message passing...

  18. Concatenated codes with convolutional inner codes

    DEFF Research Database (Denmark)

    Justesen, Jørn; Thommesen, Christian; Zyablov, Viktor


    The minimum distance of concatenated codes with Reed-Solomon outer codes and convolutional inner codes is studied. For suitable combinations of parameters the minimum distance can be lower-bounded by the product of the minimum distances of the inner and outer codes. For a randomized ensemble...... of concatenated codes a lower bound of the Gilbert-Varshamov type is proved...

  19. Coding with partially hidden Markov models

    DEFF Research Database (Denmark)

    Forchhammer, Søren; Rissanen, J.


    Partially hidden Markov models (PHMM) are introduced. They are a variation of the hidden Markov models (HMM) combining the power of explicit conditioning on past observations and the power of using hidden states. (P)HMM may be combined with arithmetic coding for lossless data compression. A general...... 2-part coding scheme for given model order but unknown parameters based on PHMM is presented. A forward-backward reestimation of parameters with a redefined backward variable is given for these models and used for estimating the unknown parameters. Proof of convergence of this reestimation is given....... The PHMM structure and the conditions of the convergence proof allows for application of the PHMM to image coding. Relations between the PHMM and hidden Markov models (HMM) are treated. Results of coding bi-level images with the PHMM coding scheme is given. The results indicate that the PHMM can adapt...

  20. Explicit criteria for prioritization of cataract surgery

    Directory of Open Access Journals (Sweden)

    Escobar Antonio


    Full Text Available Abstract Background Consensus techniques have been used previously to create explicit criteria to prioritize cataract extraction; however, the appropriateness of the intervention was not included explicitly in previous studies. We developed a prioritization tool for cataract extraction according to the RAND method. Methods Criteria were developed using a modified Delphi panel judgment process. A panel of 11 ophthalmologists was assembled. Ratings were analyzed regarding the level of agreement among panelists. We studied the effect of all variables on the final panel score using general linear and logistic regression models. Priority scoring systems were developed by means of optimal scaling and general linear models. The explicit criteria developed were summarized by means of regression tree analysis. Results Eight variables were considered to create the indications. Of the 310 indications that the panel evaluated, 22.6% were considered high priority, 52.3% intermediate priority, and 25.2% low priority. Agreement was reached for 31.9% of the indications and disagreement for 0.3%. Logistic regression and general linear models showed that the preoperative visual acuity of the cataractous eye, visual function, and anticipated visual acuity postoperatively were the most influential variables. Alternative and simple scoring systems were obtained by optimal scaling and general linear models where the previous variables were also the most important. The decision tree also shows the importance of the previous variables and the appropriateness of the intervention. Conclusion Our results showed acceptable validity as an evaluation and management tool for prioritizing cataract extraction. It also provides easy algorithms for use in clinical practice.

  1. Implicit and explicit timing in oculomotor control.

    Directory of Open Access Journals (Sweden)

    Ilhame Ameqrane

    Full Text Available The passage of time can be estimated either explicitly, e.g. before leaving home in the morning, or implicitly, e.g. when catching a flying ball. In the present study, the latency of saccadic eye movements was used to evaluate differences between implicit and explicit timing. Humans were required to make a saccade between a central and a peripheral position on a computer screen. The delay between the extinction of a central target and the appearance of an eccentric target was the independent variable that could take one out of four different values (400, 900, 1400 or 1900 ms. In target trials, the delay period lasted for one of the four durations randomly. At the end of the delay, a saccade was initiated by the appearance of an eccentric target. Cue&target trials were similar to target trials but the duration of the delay was visually cued. In probe trials, the duration of the upcoming delay was cued, but there was no eccentric target and subjects had to internally generate a saccade at the estimated end of the delay. In target and cue&target trials, the mean and variance of latency distributions decreased as delay duration increased. In cue&target trials latencies were shorter. In probe trials, the variance increased with increasing delay duration and scalar variability was observed. The major differences in saccadic latency distributions were observed between visually-guided (target and cue&target trials and internally-generated saccades (probe trials. In target and cue&target trials the timing of the response was implicit. In probe trials, the timing of the response was internally-generated and explicitly based on the duration of the visual cue. Scalar timing was observed only during probe trials. This study supports the hypothesis that there is no ubiquitous timing system in the brain but independent timing processes active depending on task demands.

  2. Sleep promotes offline enhancement of an explicitly learned discrete but not an explicitly learned continuous task

    Directory of Open Access Journals (Sweden)

    Siengsukon CF


    Full Text Available Catherine F Siengsukon, Alham Al-SharmanDepartment of Physical Therapy and Rehabilitation Science, University of Kansas Medical Center, Kansas City, KS, USABackground: Healthy young individuals benefit from sleep to promote offline enhancement of a variety of explicitly learned discrete motor tasks. It remains unknown if sleep will promote learning of other types of explicit tasks. The purpose of this study is to verify the role of sleep in learning an explicitly instructed discrete motor task and to determine if participants who practice an explicitly instructed continuous tracking task demonstrate sleep-dependent offline learning of this task.Methods: In experiment 1, 28 healthy young adults (mean age 25.6 ± 3.8 years practiced a serial reaction time (SRT task at either 8 am (SRT no-sleep group or 8 pm (SRT sleep group and underwent retention testing 12 ± 1 hours later. In experiment 2, 20 healthy young individuals (mean age 25.6 ± 3.3 years practiced a continuous tracking task and were similarly divided into a no-sleep (continuous tracking no-sleep group or sleep group (continuous tracking sleep group. Individuals in both experiments were provided with explicit instruction on the presence of a sequence in their respective task prior to practice.Results: Individuals in the SRT sleep group demonstrated a significant offline reduction in reaction time whereas the SRT no-sleep group did not. Results for experiment 1 provide concurrent evidence that explicitly learned discrete tasks undergo sleep-dependent offline enhancement. Individuals in the continuous tracking sleep group failed to demonstrate a significant offline reduction in tracking error. However, the continuous tracking no-sleep group did demonstrate a significant offline improvement in performance. Results for experiment 2 indicate that sleep is not critical for offline enhancement of an explicit learned continuous task.Conclusion: The findings that individuals who practiced an

  3. Spatially explicit non-Mendelian diploid model


    Lanchier, N.; Neuhauser, C.


    We introduce a spatially explicit model for the competition between type $a$ and type $b$ alleles. Each vertex of the $d$-dimensional integer lattice is occupied by a diploid individual, which is in one of three possible states or genotypes: $aa$, $ab$ or $bb$. We are interested in the long-term behavior of the gene frequencies when Mendel's law of segregation does not hold. This results in a voter type model depending on four parameters; each of these parameters measures the strength of comp...

  4. Implicit vs explicit renormalization and effective interactions

    Energy Technology Data Exchange (ETDEWEB)

    Ruiz Arriola, E., E-mail: [Departamento de Física Atómica, Molecular y Nuclear and Instituto Carlos I de Fisica Teórica y Computacional, Universidad de Granada, E-18071 Granada (Spain); Szpigel, S., E-mail: [Faculdade de Computação e Informática, Universidade Presbiteriana Mackenzie (Brazil); Timóteo, V.S., E-mail: [Grupo de Óptica e Modelagem Numérica – GOMNI, Faculdade de Tecnologia, Universidade Estadual de Campinas – UNICAMP (Brazil)


    Effective interactions can be obtained from a renormalization group analysis in two complementary ways. One can either explicitly integrate out higher energy modes or impose given conditions at low energies for a cut-off theory. While the first method is numerically involved, the second one can be solved almost analytically. In both cases we compare the outcoming effective interactions for the two nucleon system as functions of the cut-off scale and find a strikingly wide energy region where both approaches overlap, corresponding to relevant scales in light nuclei Λ≲200 MeV. This amounts to a great simplification in the determination of the effective interaction parameters.

  5. Matrix Algebras and Semidefinite Programming Techniques for Codes (United States)

    Gijswijt, Dion


    This PhD thesis is concerned with SDP bounds for codes: upper bounds for (non)-binary error correcting codes and lower bounds for (non)-binary covering codes. The methods are based on the method of Schrijver that uses triple distances in stead of pairs as in the classical Delsarte bound. The main topics discussed are: 1) Block-diagonalisation of matrix *-algebras, 2) Terwilliger-algebra of the nonbinary Hamming scheme (including an explicit block-diagonalisation), 3) SDP-bounds for (nonbinary) error-correcting codes and covering codes (including computational results), 4) Discussion on the relation with matrix-cuts, 5) Computational results for Affine caps.

  6. The emergence of explicit memory during learning. (United States)

    Rose, Michael; Haider, Hilde; Büchel, Christian


    In incidental learning situations, contingencies are extracted from the environment without the intention to learn and can change behavior without awareness for the extracted regularity. The development of explicit access to the learned regularity is an important learning mechanism that is rarely examined. With a series of behavioral, electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) studies, we were able to show that the emergence of awareness for a hidden regularity is accompanied by an increase in neural activity and in high-frequency coupling between distant brain areas as observed with a time-frequency resolved EEG analysis. More importantly, the increase in neural coupling was observed before awareness for the learned material was established behaviorally. In addition, coupling increases were paralleled by an fMRI-signal increase in the ventral striatum and the right ventrolateral prefrontal cortex directly preceding the emergence of awareness. The involvement of this system, which has already been linked to the processing of predictions and prediction errors, indicates the relevance of a reinforcement signal to generate awareness for the learned contingencies. Thus, our data provide direct evidence for the necessity of large-scale coupling and the evaluation of a predictive stimulus value as the basis for a transition from implicit to explicit memory.

  7. Spatially explicit modelling of cholera epidemics (United States)

    Finger, F.; Bertuzzo, E.; Mari, L.; Knox, A. C.; Gatto, M.; Rinaldo, A.


    Epidemiological models can provide crucial understanding about the dynamics of infectious diseases. Possible applications range from real-time forecasting and allocation of health care resources to testing alternative intervention mechanisms such as vaccines, antibiotics or the improvement of sanitary conditions. We apply a spatially explicit model to the cholera epidemic that struck Haiti in October 2010 and is still ongoing. The dynamics of susceptibles as well as symptomatic and asymptomatic infectives are modelled at the scale of local human communities. Dissemination of Vibrio cholerae through hydrological transport and human mobility along the road network is explicitly taken into account, as well as the effect of rainfall as a driver of increasing disease incidence. The model is calibrated using a dataset of reported cholera cases. We further model the long term impact of several types of interventions on the disease dynamics by varying parameters appropriately. Key epidemiological mechanisms and parameters which affect the efficiency of treatments such as antibiotics are identified. Our results lead to conclusions about the influence of different intervention strategies on the overall epidemiological dynamics.

  8. Does Sexually Explicit Media (SEM) Affect Me?

    DEFF Research Database (Denmark)

    Hald, Gert Martin; Træen, Bente; Noor, Syed W


    Using a self-selected online sample of 448 Norwegian men who have sex with men(MSM) and a cross-sectional design, the present study investigated first-person effectsof sexually explicit media (SEM) consumption on sexual knowledge, enjoyment of andinterest in sex, attitudes towards sex and underst......Using a self-selected online sample of 448 Norwegian men who have sex with men(MSM) and a cross-sectional design, the present study investigated first-person effectsof sexually explicit media (SEM) consumption on sexual knowledge, enjoyment of andinterest in sex, attitudes towards sex...... Scale (PCES). The study found that 93% of MSM reported smallto-largepositive effects from their SEM consumption on their sexual knowledge,enjoyment of and interest in sex, attitudes towards sex and understanding of theirsexual orientation. Only 7% reported any negative effects from their SEM...... consumptionon these outcomes. Furthermore, the psychometric properties of the revisedversion of the PCES were found to be very satisfactory. The results of the studyindicate that SEM consumption among MSM may play a positive role in MSM’ssexuality by enhancing their sex life, being a major source of sexual...

  9. Explicit solutions of the Rand Equation

    African Journals Online (AJOL)


    Keywords: Nonlinear partial differential equations, evolution equations, symmetries, similarity solutions, Rand Equation. PACS-Code: ... Classical symmetry analysis - algebraic group properties ... The result is a well-defined system of eight linear homogeneous PDEs (describing the point symmetries) for the infinitesimals. ),(.

  10. A comparative study of explicit and implicit modelling of ...

    Indian Academy of Sciences (India)

    Further, for both speaker identification and verification tasks the explicit modelling provides relatively more complimentary information to the state-of-the-art vocal tract features. The contribution of the explicit features is relatively more robust against noise. We suggest that the explicit approach can be used to model the ...

  11. Fundamentals of convolutional coding

    CERN Document Server

    Johannesson, Rolf


    Fundamentals of Convolutional Coding, Second Edition, regarded as a bible of convolutional coding brings you a clear and comprehensive discussion of the basic principles of this field * Two new chapters on low-density parity-check (LDPC) convolutional codes and iterative coding * Viterbi, BCJR, BEAST, list, and sequential decoding of convolutional codes * Distance properties of convolutional codes * Includes a downloadable solutions manual

  12. Numerical model for two-dimensional hydrodynamics and energy transport. [VECTRA code

    Energy Technology Data Exchange (ETDEWEB)

    Trent, D.S.


    The theoretical basis and computational procedure of the VECTRA computer program are presented. VECTRA (Vorticity-Energy Code for TRansport Analysis) is designed for applying numerical simulation to a broad range of intake/discharge flows in conjunction with power plant hydrological evaluation. The code computational procedure is based on finite-difference approximation of the vorticity-stream function partial differential equations which govern steady flow momentum transport of two-dimensional, incompressible, viscous fluids in conjunction with the transport of heat and other constituents.

  13. Fast isogeometric solvers for explicit dynamics

    KAUST Repository

    Gao, Longfei


    In finite element analysis, solving time-dependent partial differential equations with explicit time marching schemes requires repeatedly applying the inverse of the mass matrix. For mass matrices that can be expressed as tensor products of lower dimensional matrices, we present a direct method that has linear computational complexity, i.e., O(N), where N is the total number of degrees of freedom in the system. We refer to these matrices as separable matrices. For non-separable mass matrices, we present a preconditioned conjugate gradient method with carefully designed preconditioners as an alternative. We demonstrate that these preconditioners, which are easy to construct and cheap to apply (O(N)), can deliver significant convergence acceleration. The performances of these preconditioners are independent of the polynomial order (p independence) and mesh resolution (h independence) for maximum continuity B-splines, as verified by various numerical tests. © 2014 Elsevier B.V.

  14. [Explicit model for searching behavior of predator]. (United States)

    Tiutiunov, Iu V; Sapukhina, N Iu; Senina, I N; Arditi, R


    The authors present an approach for explicit modeling of spatio-temporal dynamics of predator-prey community. This approach is based on a reaction-diffusion-adjection PD (prey dependent) system. Local kinetics of population is determined by logistic reproduction function of prey, constant natural mortality of predator and Holling type 2 trophic function. Searching behavior of predator is described by the advective term in predator balance equation assuming the predator acceleration to be proportional to the prey density gradient. The model was studied with zero-flux boundary conditions. The influence of predator searching activity on the community dynamics, in particular, on the emergence of spatial heterogeneity, has been investigated by linear analysis and numerical simulations. It has been shown how searching activity may effect the persistence of species, stabilizing predator-prey interactions at very low level of pest density. It has been demonstrated that obtaining of such dynamic regimes does not require the use of complex trophic functions.

  15. Academic Publishing: Making the Implicit Explicit

    Directory of Open Access Journals (Sweden)

    Cecile Badenhorst


    Full Text Available For doctoral students, publishing in peer-reviewed journals is a task many face with anxiety and trepidation. The world of publishing, from choosing a journal, negotiating with editors and navigating reviewers’ responses is a bewildering place. Looking in from the outside, it seems that successful and productive academic writers have knowledge that is inaccessible to novice scholars. While there is a growing literature on writing for scholarly publication, many of these publications promote writing and publishing as a straightforward activity that anyone can achieve if they follow the rules. We argue that the specific and situated contexts in which academic writers negotiate publishing practices is more complicated and messy. In this paper, we attempt to make explicit our publishing processes to highlight the complex nature of publishing. We use autoethnographic narratives to provide discussion points and insights into the challenges of publishing peer reviewed articles. One narrative is by a doctoral student at the beginning of her publishing career, who expresses her desires, concerns and anxieties about writing for publication. The other narrative focuses on the publishing practices of a more experienced academic writer. Both are international scholars working in the Canadian context. The purpose of this paper is to explore academic publishing through the juxtaposition of these two narratives to make explicit some of the more implicit processes. Four themes emerge from these narratives. To publish successfully, academic writers need: (1 to be discourse analysts; (2 to have a critical competence; (3 to have writing fluency; and (4 to be emotionally intelligent.

  16. Simulating Space Capsule Water Landing with Explicit Finite Element Method (United States)

    Wang, John T.; Lyle, Karen H.


    A study of using an explicit nonlinear dynamic finite element code for simulating the water landing of a space capsule was performed. The finite element model contains Lagrangian shell elements for the space capsule and Eulerian solid elements for the water and air. An Arbitrary Lagrangian Eulerian (ALE) solver and a penalty coupling method were used for predicting the fluid and structure interaction forces. The space capsule was first assumed to be rigid, so the numerical results could be correlated with closed form solutions. The water and air meshes were continuously refined until the solution was converged. The converged maximum deceleration predicted is bounded by the classical von Karman and Wagner solutions and is considered to be an adequate solution. The refined water and air meshes were then used in the models for simulating the water landing of a capsule model that has a flexible bottom. For small pitch angle cases, the maximum deceleration from the flexible capsule model was found to be significantly greater than the maximum deceleration obtained from the corresponding rigid model. For large pitch angle cases, the difference between the maximum deceleration of the flexible model and that of its corresponding rigid model is smaller. Test data of Apollo space capsules with a flexible heat shield qualitatively support the findings presented in this paper.

  17. Advanced Electric and Magnetic Material Models for FDTD Electromagnetic Codes

    CERN Document Server

    Poole, Brian R; Nelson, Scott D


    The modeling of dielectric and magnetic materials in the time domain is required for pulse power applications, pulsed induction accelerators, and advanced transmission lines. For example, most induction accelerator modules require the use of magnetic materials to provide adequate Volt-sec during the acceleration pulse. These models require hysteresis and saturation to simulate the saturation wavefront in a multipulse environment. In high voltage transmission line applications such as shock or soliton lines the dielectric is operating in a highly nonlinear regime, which requires nonlinear models. Simple 1-D models are developed for fast parameterization of transmission line structures. In the case of nonlinear dielectrics, a simple analytic model describing the permittivity in terms of electric field is used in a 3-D finite difference time domain code (FDTD). In the case of magnetic materials, both rate independent and rate dependent Hodgdon magnetic material models have been implemented into 3-D FDTD codes an...

  18. Reference manual for the POISSON/SUPERFISH Group of Codes

    Energy Technology Data Exchange (ETDEWEB)


    The POISSON/SUPERFISH Group codes were set up to solve two separate problems: the design of magnets and the design of rf cavities in a two-dimensional geometry. The first stage of either problem is to describe the layout of the magnet or cavity in a way that can be used as input to solve the generalized Poisson equation for magnets or the Helmholtz equations for cavities. The computer codes require that the problems be discretized by replacing the differentials (dx,dy) by finite differences ({delta}X,{delta}Y). Instead of defining the function everywhere in a plane, the function is defined only at a finite number of points on a mesh in the plane.

  19. A Comparison of Schools: Teacher Knowledge of Explicit Code-Based Reading Instruction (United States)

    Cohen, Rebecca A.; Mather, Nancy; Schneider, Deborah A.; White, Jennifer M.


    One-hundred-fourteen kindergarten through third-grade teachers from seven different schools were surveyed using "The Survey of Preparedness and Knowledge of Language Structure Related to Teaching Reading to Struggling Students." The purpose was to compare their definitions and application knowledge of language structure, phonics, and…

  20. Temporal event-structure coding in developmental dyslexia: Evidence from explicit and implicit temporal processes

    Directory of Open Access Journals (Sweden)

    Elliott Mark A.


    Full Text Available As an alternative to theories positing visual or phonological deficits it has been suggested that the aetiology of dyslexia takes the form of a temporal processing deficit that may refer to impairment in the functional connectivity of the processes involved in reading. Here we investigated this idea in an experimental task designed to measure simultaneity thresholds. Fifteen children diagnosed with developmental dyslexia, alongside a matched sample of 13 normal readers undertook a series of threshold determination procedures designed to locate visual simultaneity thresholds and to assess the influence of subthreshold synchrony or asynchrony upon these thresholds. While there were no significant differences in simultaneity thresholds between dyslexic and normal readers, indicating no evidence of an altered perception, or temporal quantization of events, the dyslexic readers reported simultaneity significantly less frequently than normal readers, with the reduction largely attributable presentation of a subthreshold asynchrony. The results are discussed in terms of a whole systems approach to maintaining information processing integrity.