WorldWideScience

Sample records for diel activity patterns

  1. Diel Patterns of Activity for Insect Pollinators of Two Oil Palm Species (Arecales : Arecaceae).

    Science.gov (United States)

    Auffray, Thomas; Frérot, Brigitte; Poveda, Roberto; Louise, Claude; Beaudoin-Ollivier, Laurence

    2017-01-01

    The pollination of two oil palm species, Elaeis guineensis Jacquin and Elaeis oleifera Cortés (Arecales: Arecaceae), depends on a mutualistic relation with insects, which use male inflorescences as a brood site, and visits female inflorescences lured by the emitted odor, which is similar to that of males. Although the activity of visiting the inflorescences by these insects is critical for the adequate natural pollination of the host plant, their activity is poorly documented. In the present study, we determine the diel activity of two specialized pollinator weevils (Coleoptera: Curculionidae) on inflorescences of their respective host-palm: Elaeidobius kamerunicus Faust specialized on E. guineensis, and Grasidius hybridus O'Brien and Beserra specialized on E. oleifera. The average timing of activity was studied by using passive interception traps. Then the pattern and the duration were refined by using aspiration trapping within the active period for each insect species at the male and female inflorescences. All the experiments were conducted in an Ecuadorian oil palm plantation, located close to Amazonian forest. El. kamerunicus and G. hybridus were found to be the pollinators of E. guineensis and E. oleifera, respectively. The two species differed in their diel pattern of activity: E. kamerunicus was active in the morning and G. hybridus during a short period at dusk. For both palm species, insect visits were synchronous on both male and female inflorescences. The synchronicity is discussed as a strategy to maintain the relation mutualistic between partners. These findings increase our understanding of the oil palm pollination system.

  2. Seasonal and Diel Activity Patterns of Eight Sympatric Mammals in Northern Japan Revealed by an Intensive Camera-Trap Survey

    Science.gov (United States)

    Ikeda, Takashi; Uchida, Kenta; Matsuura, Yukiko; Takahashi, Hiroshi; Yoshida, Tsuyoshi; Kaji, Koichi; Koizumi, Itsuro

    2016-01-01

    The activity patterns of mammals are generally categorized as nocturnal, diurnal, crepuscular (active at twilight), and cathemeral (active throughout the day). These patterns are highly variable across regions and seasons even within the same species. However, quantitative data is still lacking, particularly for sympatric species. We monitored the seasonal and diel activity patterns of terrestrial mammals in Hokkaido, Japan. Through an intensive camera-trap survey a total of 13,279 capture events were recorded from eight mammals over 20,344 camera-trap days, i.e., two years. Diel activity patterns were clearly divided into four categories: diurnal (Eurasian red squirrels), nocturnal (raccoon dogs and raccoons), crepuscular (sika deer and mountain hares), and cathemeral (Japanese martens, red foxes, and brown bears). Some crepuscular and cathemeral mammals shifted activity peaks across seasons. Particularly, sika deer changed peaks from twilight during spring–autumn to day-time in winter, possibly because of thermal constraints. Japanese martens were cathemeral during winter–summer, but nocturnal in autumn. We found no clear indication of predator-prey and competitive interactions, suggesting that animal densities are not very high or temporal niche partitioning is absent among the target species. This long-term camera-trap survey was highly cost-effective and provided one of the most detailed seasonal and diel activity patterns in multiple sympatric mammals under natural conditions. PMID:27732611

  3. Supplemental feeding for ecotourism reverses diel activity and alters movement patterns and spatial distribution of the southern stingray, Dasyatis americana.

    Directory of Open Access Journals (Sweden)

    Mark J Corcoran

    Full Text Available Southern stingrays, Dasyatis americana, have been provided supplemental food in ecotourism operations at Stingray City Sandbar (SCS, Grand Cayman since 1986, with this site becoming one of the world's most famous and heavily visited marine wildlife interaction venues. Given expansion of marine wildlife interactive tourism worldwide, there are questions about the effects of such activities on the focal species and their ecosystems. We used a combination of acoustic telemetry and tag-recapture efforts to test the hypothesis that human-sourced supplemental feeding has altered stingray activity patterns and habitat use at SCS relative to wild animals at control sites. Secondarily, we also qualitatively estimated the population size of stingrays supporting this major ecotourism venue. Tag-recapture data indicated that a population of at least 164 stingrays, over 80% female, utilized the small area at SCS for prolonged periods of time. Examination of comparative movements of mature female stingrays at SCS and control sites revealed strong differences between the two groups: The fed animals demonstrated a notable inversion of diel activity, being constantly active during the day with little movement at night compared to the nocturnally active wild stingrays; The fed stingrays utilized significantly (p<0.05 smaller 24 hour activity spaces compared to wild conspecifics, staying in close proximity to the ecotourism site; Fed stingrays showed a high degree of overlap in their core activity spaces compared to wild stingrays which were largely solitary in the spaces utilized (72% vs. 3% overlap respectively. Supplemental feeding has strikingly altered movement behavior and spatial distribution of the stingrays, and generated an atypically high density of animals at SCS which could have downstream fitness costs for individuals and potentially broader ecosystem effects. These findings should help environmental managers plan mitigating measures for existing

  4. Supplemental feeding for ecotourism reverses diel activity and alters movement patterns and spatial distribution of the southern stingray, Dasyatis americana.

    Science.gov (United States)

    Corcoran, Mark J; Wetherbee, Bradley M; Shivji, Mahmood S; Potenski, Matthew D; Chapman, Demian D; Harvey, Guy M

    2013-01-01

    Southern stingrays, Dasyatis americana, have been provided supplemental food in ecotourism operations at Stingray City Sandbar (SCS), Grand Cayman since 1986, with this site becoming one of the world's most famous and heavily visited marine wildlife interaction venues. Given expansion of marine wildlife interactive tourism worldwide, there are questions about the effects of such activities on the focal species and their ecosystems. We used a combination of acoustic telemetry and tag-recapture efforts to test the hypothesis that human-sourced supplemental feeding has altered stingray activity patterns and habitat use at SCS relative to wild animals at control sites. Secondarily, we also qualitatively estimated the population size of stingrays supporting this major ecotourism venue. Tag-recapture data indicated that a population of at least 164 stingrays, over 80% female, utilized the small area at SCS for prolonged periods of time. Examination of comparative movements of mature female stingrays at SCS and control sites revealed strong differences between the two groups: The fed animals demonstrated a notable inversion of diel activity, being constantly active during the day with little movement at night compared to the nocturnally active wild stingrays; The fed stingrays utilized significantly (pstingrays showed a high degree of overlap in their core activity spaces compared to wild stingrays which were largely solitary in the spaces utilized (72% vs. 3% overlap respectively). Supplemental feeding has strikingly altered movement behavior and spatial distribution of the stingrays, and generated an atypically high density of animals at SCS which could have downstream fitness costs for individuals and potentially broader ecosystem effects. These findings should help environmental managers plan mitigating measures for existing operations, and develop precautionary policies regarding proposed feeding sites.

  5. Diel patterns and temporal trends in spawning activities of Robust Redhorse and River Redhorse in Georgia, assessed using passive acoustic monitoring

    Science.gov (United States)

    Straight, Carrie A.; Jackson, C. Rhett; Freeman, Byron J.; Freeman, Mary C.

    2015-01-01

    The conservation of imperiled species depends upon understanding threats to the species at each stage of its life history. In the case of many imperiled migratory fishes, understanding how timing and environmental influences affect reproductive behavior could provide managers with information critical for species conservation. We used passive acoustic recorders to document spawning activities for two large-bodied catostomids (Robust Redhorse Moxostoma robustum in the Savannah and Broad rivers, Georgia, and River Redhorse M. carinatum in the Coosawattee River, Georgia) in relation to time of day, water temperature, discharge variation, moonlight, and weather. Robust Redhorse spawning activities in the Savannah and Broad rivers were more frequent at night or in the early morning (0100–0400 hours and 0800–1000 hours, respectively) and less frequent near midday (1300 hours). Spawning attempts in the Savannah and Broad rivers increased over a 3–4-d period and then declined. River Redhorse spawning activities in the Coosawattee River peaked on the first day of recording and declined over four subsequent days; diel patterns were less discernible, although moon illumination was positively associated with spawning rates, which was also observed for Robust Redhorses in the Savannah River. Spawning activity in the Savannah and Broad rivers was negatively associated with water temperature, and spawning activity increased in association with cloud cover in the Savannah River. A large variation in discharge was only measured in the flow-regulated Savannah River and was not associated with spawning attempts. To our knowledge, this is the first study to show diel and multiday patterns in spawning activities for anyMoxostoma species. These patterns and relationships between the environment and spawning activities could provide important information for the management of these species downstream of hydropower facilities.

  6. Diel feeding pattern of whiting in the North Sea

    DEFF Research Database (Denmark)

    Rindorf, Anna

    2003-01-01

    Though numerous studies have analysed the feeding periodicity of North Sea gadoids, no general diel pattern has been found. The lack of agreement between studies may be related to differences, in prey composition and behaviour, but it has not been attempted to link the diel intake pattern directly...... to intake of individual prey. This study presents an analysis of the round the clock occurrence of several prey types in the stomachs of whiting Merlangius merlangus, a major predator on fish and crustaceans in the North Sea. Generalised linear models were used to determine if the occurrence of different...

  7. Estimating dew formation in rice, using seasonally averaged diel patterns of weather variables

    OpenAIRE

    Luo, W.; Goudriaan, J.

    2004-01-01

    If dew formation cannot be measured it has to be estimated. Available simulation models for estimating dew formation require hourly weather data as input. However, such data are not available for places without an automatic weather station. In such cases the diel pattern of weather variables might be used to run the simulation model. To investigate the possibility of using diel patterns of weather variables to estimate dew formation, a field experiment was carried out from February to April 1...

  8. Diel methane emission patterns from Scirpus lacustris and Phragmites australis

    NARCIS (Netherlands)

    Van der Nat, J.W.A.; Middelburg, J.J.; Van Meteren, D.; Wielemaker, A.

    1998-01-01

    In mature Phragmites australis and Scirpus lacustris vegetated sediment methane was emitted almost exclusively by plant- mediated transport, whereas in unvegetated, but otherwise identical sediment, methane was emitted almost exclusively by ebullition. Diel variations in methane emission, with

  9. Diel methane emission patterns from Scirpus lacustris and Phragmites australis

    NARCIS (Netherlands)

    Van der Nat, J.W.A.; Middelburg, J.J.; Van Meteren, D.; Wielemaker, A.

    1998-01-01

    In mature Phragmites australis and Scirpus lacustris vegetated sediment methane was emitted almost exclusively by plant- mediated transport, whereas in unvegetated, but otherwise identical sediment, methane was emitted almost exclusively by ebullition. Diel variations in methane emission, with highe

  10. Diel Patterns of Colaspis brunnea and Colaspis crinicornis (Coleoptera: Chrysomelidae) in Southeastern Nebraska.

    Science.gov (United States)

    Miwa, Kentaro; Meinke, Lance J

    2015-12-01

    A field study was conducted to increase our understanding of diel activity patterns of Colaspis brunnea (F.) and Colaspis crinicornis Schaeffer (Coleoptera: Chrysomelidae) in key crop habitats. Within 24-h periods, C. brunnea was sampled in clover fields (primarily red clover, Trifolium pretense (L.), with some sweet clover, Melilotus officinalis (L.) Pallas, and downy brome, Bromus tectorum (L.)) and soybean, Glycine max (L.) Merrill, fields, using a sweep-net, while whole-plant-count sampling was used to monitor C. crinicornis densities in field corn, Zea mays (L.). Sweep-net captures of C. brunnea were significantly greater at night than during the day, suggesting possible vertical movement within the canopy during a 24-h period. Colaspis crinicornis densities on corn plants were fairly constant throughout a 24-h period, but beetle activity (e.g., walking, mating) was significantly greater at night than during the day. Results suggest that both Colaspis species may be exhibiting similar increases in activity at night that facilitates movement from more protected to more exposed areas within a habitat. It is unclear what mechanisms drive this diel pattern, but vegetation architecture and associated interactions with environmental conditions may play a role. Sweep-netting in clover or soybean fields and use of whole-plant-counts in cornfields were effective sampling methods for Colaspis adults. However, because activity and behaviors of Colaspis beetles were influenced by time of day in this study, use of a consistent sampling time within a diel period would be recommended for future population studies or integrated pest management decision-making.

  11. Atmospheric turbulence triggers pronounced diel pattern in karst carbonate geochemistry

    Directory of Open Access Journals (Sweden)

    M. Roland

    2013-01-01

    Full Text Available CO2 exchange between terrestrial ecosystems and the atmosphere is key to understanding the feedbacks between climate change and the land surface. In regions with carbonaceous parent material, CO2 exchange patterns occur that cannot be explained by biological processes, such as disproportionate outgassing during daytime or nighttime CO2 uptake during periods when all vegetation is senescent. Neither of these phenomena can be attributed to carbonate weathering reactions, since their CO2 exchange rates are too small. Soil ventilation induced by high atmospheric turbulence is found to explain atypical CO2 exchange between carbonaceous systems and the atmosphere. However, by strongly altering subsurface CO2 concentrations, ventilation can be expected to influence carbonate weathering rates. By imposing ventilation-driven CO2 outgassing in a carbonate weathering model, we show here that carbonate geochemistry is accelerated and does play a surprisingly large role in the observed CO2 exchange patterns. We found that by rapidly depleting soil CO2 during daytime, ventilation disturbs soil carbonate equilibria and therefore strongly magnifies daytime carbonate precipitation and associated CO2 production. At night, ventilation ceases and the depleted CO2 concentrations increase steadily. Dissolution of carbonate is now enhanced, which consumes CO2 and largely compensates for the enhanced daytime carbonate precipitation. This is why only a relatively small effect on global carbonate weathering rates is to be expected. On the short term, however, ventilation has a drastic effect on synoptic carbonate weathering rates, resulting in a pronounced diel pattern that exacerbates the non-biological behavior of soil-atmosphere CO2 exchanges in dry regions with carbonate soils.

  12. Diel flight behaviour and dispersal patterns of aquatic Coleoptera and Heteroptera species with special emphasis on the importance of seasons

    Science.gov (United States)

    Csabai, Zoltán; Kálmán, Zoltán; Szivák, Ildikó; Boda, Pál

    2012-09-01

    Dispersal flight is the most important and almost the only way for primary aquatic insects to find new water habitats. During a 30-week-long project, we monitored the flight dispersal behaviour of aquatic beetles and bugs with using highly and horizontally polarizing agricultural black plastic sheets laid onto the ground. Based on the flight data of more than 45,000 individuals and 92 species, we explored and described eight different diel flight activity patterns. We found that seven of eight dispersal patterns are consistent with the previous knowledge, while three conspicuous mass dispersal periods can be identified as in the mid morning and/or around noon and/or at nightfall. As an exception, we found a `daytime' pattern occurred exclusively in spring, in which mass dispersal can be seen from mid morning to late afternoon. In contrast to previous studies, we emphasize here that the seasonality has to be considered in evaluation of the diurnal flight activity. According to the seasons, a `three code sign' was proposed to indicate the diel dispersal flight behaviour of a species for a year. Most of the species utilize different diel activity patterns in different seasons. In spring, the daytime pattern was the preferred type, but in summer and autumn, the evening types were the most popular patterns. We stated that the seasonal change of air temperature has a crucial role in that a pattern could be manifested in a given season or not and brings a need to change the diel dispersal pattern among seasons.

  13. The diel patterns of soil respiration in four arid California ecosystems: fluxes, sources and hypotheses

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    Carbone, M.; Trumbore, S.; Winston, G.; Serio, D.

    2007-12-01

    Automated measurements provide the high-resolution information that enables us to analyze potential causes for diel variability in soil respiration. These diel patterns are the complex result of biological and physical processes that determine the production and diffusion of CO2 through the soil. We examined the diel patterns of soil respiration from four arid California ecosystems: (1) a pinon-juniper woodland in at the Burns Pinon Ridge Reserve near Joshua Tree National Park, (2) a cold desert shrub community and (3) a perennial grassland near the city of Bishop in the Owens Valley, and (4) a mixed oak-pine forest at the James Reserve in the San Jacinto Mountains. In addition to automated chamber and environmental measurements at these sites, we used isotopic (14C) partitioning techniques to separate the plant and microbial sources contributing to soil respiration at certain time points. Here we present the diel cycles of soil respiration and environmental variables, the source partitioning results, and hypotheses about what processes determine these diel patterns that both span, and are specific to the studied ecosystems. In these systems dominated by Mediterranean or desert climates, we observed that factors like relative humidity can dominate the diel variations in soil respiration for sites with very dry surface litter. At other sites and times of year, diel variation in soil respiration reflects photosynthetic and VPD influence on root respiration. The combination of automated chamber measurements with isotopes provides information useful for separating the plant and heterotrophic control on diel and seasonal soil respiration fluxes.

  14. Diel activity patterns of juvenile late fall-run Chinook salmon with implications for operation of a gated water diversion in the Sacramento–San Joaquin River Delta

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    Plumb, John M.; Adams, Noah S.; Perry, Russell W.; Holbrook, Christopher; Romine, Jason G.; Blake, Aaron R.; Burau, Jon R.

    2016-01-01

    In the Sacramento-San Joaquin River Delta, California, tidal forces that reverse river flows increase the proportion of water and juvenile late fall-run Chinook salmon diverted into a network of channels that were constructed to support agriculture and human consumption. This area is known as the interior delta, and it has been associated with poor fish survival. Under the rationale that the fish will be diverted in proportion to the amount of water that is diverted, the Delta Cross Channel (DCC) has been prescriptively closed during the winter out-migration to reduce fish entrainment and mortality into the interior delta. The fish are thought to migrate mostly at night, and so daytime operation of the DCC may allow for water diversion that minimizes fish entrainment and mortality. To assess this, the DCC gate was experimentally opened and closed while we released 2983 of the fish with acoustic transmitters upstream of the DCC to monitor their arrival and entrainment into the DCC. We used logistic regression to model night-time arrival and entrainment probabilities with covariates that included the proportion of each diel period with upstream flow, flow, rate of change in flow and water temperature. The proportion of time with upstream flow was the most important driver of night-time arrival probability, yet river flow had the largest effect on fish entrainment into the DCC. Modelling results suggest opening the DCC during daytime while keeping the DCC closed during night-time may allow for water diversion that minimizes fish entrainment into the interior delta.

  15. Intra-population variation in activity ranges, diel patterns, movement rates, and habitat use of American alligators in a subtropical estuary

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    Rosenblatt, Adam E.; Heithaus, Michael R.; Mazzotti, Frank M; Cherkiss, Michael S.; Jeffery, Brian M.

    2013-01-01

    Movement and habitat use patterns are fundamental components of the behaviors of mobile animals and help determine the scale and types of interactions they have with their environments. These behaviors are especially important to quantify for top predators because they can have strong effects on lower trophic levels as well as the wider ecosystem. Many studies of top predator movement and habitat use focus on general population level trends, which may overlook important intra-population variation in behaviors that now appear to be common. In an effort to better understand the prevalence of intrapopulation variation in top predator movement behaviors and the potential effects of such variation on ecosystem dynamics, we examined the movement and habitat use patterns of a population of adult American alligators (Alligator mississippiensis) in a subtropical estuary for nearly four years. We found that alligators exhibited divergent behaviors with respect to activity ranges, movement rates, and habitat use, and that individualized behaviors were stable over multiple years. We also found that the variations across the three behavioral metrics were correlated such that consistent behavioral types emerged, specifically more exploratory individuals and more sedentary individuals. Our study demonstrates that top predator populations can be characterized by high degrees of intra-population variation in terms of movement and habitat use behaviors that could lead to individuals filling different ecological roles in the same ecosystem. By extension, one-size-fits-all ecosystem and species-specific conservation and management strategies that do not account for potential intra-population variation in top predator behaviors may not produce the desired outcomes in all cases.

  16. Estimating dew formation in rice, using seasonally averaged diel patterns of weather variables

    NARCIS (Netherlands)

    Luo, W.; Goudriaan, J.

    2004-01-01

    If dew formation cannot be measured it has to be estimated. Available simulation models for estimating dew formation require hourly weather data as input. However, such data are not available for places without an automatic weather station. In such cases the diel pattern of weather variables might

  17. Diel pattern of soil respiration in N-amended soil under maize cultivation

    Science.gov (United States)

    Ding, Weixin; Cai, Yan; Cai, Zucong; Zheng, Xunhua

    To understand maize- and N-induced diel variations in CO 2 emission, we examined hourly CO 2 emissions during the three typical growth stages of maize in sandy loam soil. There was a distinct diel pattern in soil CO 2 emissions, with the peak occurring between 14:00 and 18:00 and the trough occurring between 0:00 and 4:00. Maize presence delayed the time of the peak. The absolute amount and diel fluctuation of CO 2 emissions tended to diminish with time in the bare soil fertilized with 150 kg N ha -1 (BS). In contrast, N-fertilized maize (N150) significantly enhanced the total amount of CO 2 emissions and the peak-trough differences in CO 2 emissions, which reached a maximum at the pollination stage and then decreased. Control soil (CK) containing maize but no N fertilizer had highest overall CO 2 emissions but reduced diel fluctuation because rhizosphere respiration was elevated in the nighttime. Soil temperature accounted for 61-71% of diel variation in the BS treatment but for only 44-59% and 38-58% in the N150 and CK treatments, respectively. Photosynthesis rates affected diel variation at the seedling and pollination stages. Both temperature and photosynthesis rates together explained up to 67-84% of diel variation at the seedling and pollination stages in the N150 treatment, but only 61% at the seedling stage in the CK treatment due to more CO 2 released in the nighttime. The increased nighttime CO 2 release, in turn, decreased the effect of temperature and even reduced the influence of photosynthesis rate on diel variations in CO 2 release. Based on the present results, the best time for obtaining a representative daily CO 2 measurement was found to be approximately 8:00 at the seedling stage and 9:00-11:00 at the other growth stages. The current findings indicate that N addition reduces soil CO 2 emissions and its diel fluctuation.

  18. Passive Acoustic Monitoring the Diel, Lunar, Seasonal and Tidal Patterns in the Biosonar Activity of the Indo-Pacific Humpback Dolphins (Sousa chinensis in the Pearl River Estuary, China.

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    Zhi-Tao Wang

    Full Text Available A growing demand for sustainable energy has led to an increase in construction of offshore windfarms. Guishan windmill farm will be constructed in the Pearl River Estuary, China, which sustains the world's largest known population of Indo-Pacific humpback dolphins (Sousa chinensis. Dolphin conservation is an urgent issue in this region. By using passive acoustic monitoring, a baseline distribution of data on this species in the Pearl River Estuary during pre-construction period had been collected. Dolphin biosonar detection and its diel, lunar, seasonal and tidal patterns were examined using a Generalized Linear Model. Significant higher echolocation detections at night than during the day, in winter-spring than in summer-autumn, at high tide than at flood tide were recognized. Significant higher echolocation detections during the new moon were recognized at night time. The diel, lunar and seasonal patterns for the echolocation encounter duration also significantly varied. These patterns could be due to the spatial-temporal variability of dolphin prey and illumination conditions. The baseline information will be useful for driving further effective action on the conservation of this species and in facilitating later assessments of the effects of the offshore windfarm on the dolphins by comparing the baseline to post construction and post mitigation efforts.

  19. Passive Acoustic Monitoring the Diel, Lunar, Seasonal and Tidal Patterns in the Biosonar Activity of the Indo-Pacific Humpback Dolphins (Sousa chinensis) in the Pearl River Estuary, China.

    Science.gov (United States)

    Wang, Zhi-Tao; Nachtigall, Paul E; Akamatsu, Tomonari; Wang, Ke-Xiong; Wu, Yu-Ping; Liu, Jian-Chang; Duan, Guo-Qin; Cao, Han-Jiang; Wang, Ding

    2015-01-01

    A growing demand for sustainable energy has led to an increase in construction of offshore windfarms. Guishan windmill farm will be constructed in the Pearl River Estuary, China, which sustains the world's largest known population of Indo-Pacific humpback dolphins (Sousa chinensis). Dolphin conservation is an urgent issue in this region. By using passive acoustic monitoring, a baseline distribution of data on this species in the Pearl River Estuary during pre-construction period had been collected. Dolphin biosonar detection and its diel, lunar, seasonal and tidal patterns were examined using a Generalized Linear Model. Significant higher echolocation detections at night than during the day, in winter-spring than in summer-autumn, at high tide than at flood tide were recognized. Significant higher echolocation detections during the new moon were recognized at night time. The diel, lunar and seasonal patterns for the echolocation encounter duration also significantly varied. These patterns could be due to the spatial-temporal variability of dolphin prey and illumination conditions. The baseline information will be useful for driving further effective action on the conservation of this species and in facilitating later assessments of the effects of the offshore windfarm on the dolphins by comparing the baseline to post construction and post mitigation efforts.

  20. Zooplankton diel vertical migration and contribution to deep active carbon flux in the NW Mediterranean

    Science.gov (United States)

    Isla, Alejandro; Scharek, Renate; Latasa, Mikel

    2015-03-01

    The diel vertical migration (DVM) of zooplankton contributes to the biological pump transporting material from surface to deep waters. We examined the DVM of the zooplankton community in different size fractions (53-200 μm, 200-500 μm, 500-1000 μm, 1000-2000 μm and > 2000 μm) during three cruises carried out in the open NW Mediterranean Sea. We assessed their metabolic rates from empirical published relationships and estimated the active fluxes of dissolved carbon to the mesopelagic zone driven by migrant zooplankton. Within the predominantly oligotrophic Mediterranean Sea, the NW region is one of the most productive ones, with a seasonal cycle characterized by a prominent spring bloom. The study area was visited at three different phases of the seasonal cycle: during the spring bloom, the post-bloom, and strongly stratified oligotrophic conditions. We found seasonal differences in DVM, less evident during the bloom. Changes in DVM intensity were related to the composition of the zooplanktonic assemblage, which also varied between cruises. Euphausiids appeared as the most active migrants in all seasons, and their life cycle conditioned the observed pattern. Immature stages, which are unable to perform large diel vertical movements, dominated during the bloom, in contrast to the higher relative importance of migrating adults in the other two sampling periods. The amount of dissolved carbon exported was determined by the migrant zooplankton biomass, being highest during the post-bloom (2.2 mmol C respired m- 2 d- 1, and up to 3.1 mmol C exported m- 2 d- 1 when DOC release estimations are added). The active transport by diel migrants represented a substantial contribution to total carbon export to deep waters, especially under stratified oligotrophic conditions, revealing the importance of zooplankton in the biological pump operating in the study area.

  1. Niobium Pentachloride Activation of Enone Derivatives: Diels-Alder and Conjugate Addition Products

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    Gil Valdo José da Silva

    2002-05-01

    Full Text Available Niobium pentachloride has proven to be a powerful activating agent for Diels-Alder or conjugate addition reactions of cycloenones. The Diels-Alder product was obtained only with an unsubstituted enone (cyclohexenone and the highly reactive diene cyclopentadiene; substituents in the b-position of enones seem to prevent Diels-Alder reaction: oxygenated substituents favor the formation of vinyl chlorides (ethyl ether or dichloromethane as solvents or enol ethers (ethyl acetate as solvent, while a methyl substituent prevents any kind of transformation with NbCl5. Less reactive dienes, furan and 2-methylfuran gave the conjugate addition products of the furan ring to the enone system.

  2. Characterization of Gulf sturgeon diel and seasonal activity in the Pensacola Bay system, Florida

    Science.gov (United States)

    Wrege, Beth Marie

    2009-12-01

    We assess temporal and spatial distribution and diel variability in activity of Gulf of Mexico sturgeon Acipenser oxyrinchus desotoi in the Pensacola Bay system, Florida, using stationary ultrasonic telemetry. Gulf of Mexico sturgeon (n = 54) migrated through the bay system in fall to wintering areas in the Gulf of Mexico and Santa Rosa Sound. In spring, sturgeon migrated back through the bay system to summering habitats in rivers. Gulf of Mexico sturgeon use East Bay and Escambia Bay primarily as migration routes between riverine areas used in spring and summer and the Gulf of Mexico used in winter. North Central Pensacola Bay was not routinely frequented. Gulf of Mexico sturgeon used specific areas within the Pensacola Bay system in summer and winter not previously documented as essential sturgeon habitat. Areas in southeastern Pensacola were used heavily during winter by a portion of the population. Gulf of Mexico sturgeon also exhibited long-term winter residency in Santa Rosa Sound. Interestingly, an area in northeastern Escambia Bay supported Gulf of Mexico sturgeon in summer. This observation was unexpected; however, the identification of Gulf of Mexico sturgeon in this area at this time has important ecological and management implications. Gulf of Mexico sturgeon exhibited a strong diel activity pattern. Gulf of Mexico sturgeon were more active at night than during day in all seasons but summer. The use of prepositioned arrays of acoustic receivers not only provides continuous data within a defined area, but provides insights into nocturnal behavior not previously examined.

  3. Understanding controls of diel patterns of biological CO2 fixation in the North Atlantic Ocean

    Science.gov (United States)

    Thomas, Helmuth; Craig, Susanne E.; Greenan, Blair W.; Burt, William; Herndl, Gerhard J.; Higginson, Simon; Salt, Lesley; Shadwick, Elizabeth H.; Urrego-Blanco, Jorge

    2013-04-01

    Much of the variability in the surface ocean's carbon cycle can be attributed to the availability of sunlight, through processes such as surface heat flux and photosynthesis, which regulate carbon flux over a wide range of time scales. The critical processes occurring on timescales of a day or less, however, have undergone few investigations, and most of these have been limited time spans of several days to months. Optical methods have helped to infer short-term biological variability, but corresponding investigations of the oceanic CO2 system are lacking. We employ high-frequency CO2 and optical observations covering the full seasonal cycle on the Scotian Shelf, Northwestern Atlantic Ocean, in order to unravel diel periodicity of the surface ocean carbon cycle and its effects on annual budgets. Significant diel periodicity ion the surface CO2 system occurs only if the water column is sufficiently stable as observed during seasonal warming. During that time biological CO2 drawdown, or net community production (NCP), are delayed for several hours relative to the onset of photosynthetically available radiation (PAR), due to diel cycles in Chlorophyll a concentration and to grazing. In summer, NCP decreases by more than 90%, coinciding with the seasonal minimum of the mixed layer depth and resulting in the disappearance of the diel CO2 periodicity in the surface waters. Ongoing work focuses on the transfer of these patterns to the individual -ideally remotely detectable- biological species, responsible for the CO2 fixation at the seasonal scale in order to predict vulnerability of the system due to climate change.

  4. Diel biting activity of Culex (Melanoconion) caudelli in Trinidad, West Indies.

    Science.gov (United States)

    Chadee, D D; Tikasingh, E S

    1989-07-01

    The diel biting periodicity of the arbovirus vector Culex (Melanoconion) caudelli Dyar and Knab (Diptera; Culicidae) in the Aripo-Wallerfield forest, Trinidad, was studied by collecting mosquitoes attracted to mouse-baited traps at 2-hourly intervals during eight 24 h periods. Biting females of Cx caudelli were collected during all night-time hours, 18.00-06.00 hours, with an overall unimodal pattern, i.e. one well-defined peak between 22.00 and 04.00 hours. This contrasts with previous reports that Cx caudelli is diurnally active. During the four moon phases, the period of peak biting activity varied from 22.00 to 24.00 hours at fullmoon, from 22.00 to 04.00 hours at first quarter, and from 24.00 to 02.00 hours at new moon and last quarter phases. The number of mosquitoes collected varied significantly with moon phases, the highest (152/24 h) being collected in the first lunar quarter and the lowest (71/24 h) in the last lunar quarter. Cloud cover and rainfall had no significant effect on the diel biting periodicity of Cx caudelli.

  5. Atmospheric turbulence triggers pronounced diel pattern in karst carbonate geochemistry

    OpenAIRE

    Roland, M.; Serrano-Ortiz, P.; Kowalski, A. S.; Goddéris, Y.; Sánchez-Cañete, E.P.; P. Ciais; F. Domingo; Cuezva, S.; Sanchez-Moral, S.; B. Longdoz; Yakir, D.; R. Van Grieken; Schott, J; Cardell, C.; I. A. Janssens

    2013-01-01

    CO2 exchange between terrestrial ecosystems and the atmosphere is key to understanding the feedbacks between climate change and the land surface. In regions with carbonaceous parent material, CO2 exchange patterns occur that cannot be explained by biological processes, such as disproportionate outgassing during the daytime or nighttime CO2 uptake during periods when all vegetation is senescent. Neither of these phenomena can be attributed to carbonate weathering reactions, since their CO2 exc...

  6. Tidal Influence on the Diel Vertical Migration Pattern of Zooplankton in a Tropical Monsoonal Estuary

    KAUST Repository

    Vineetha, G.

    2015-04-03

    Monsoonal estuaries, located along the coastline of the Indian subcontinent, differ from other estuaries by their time dependence on the salinity characteristics. Effective sustenance and retention of the mesozooplankton community in the estuarine habitats is often determined by their dominant behavioral patterns: diel vertical migration (DVM) and tidal vertical migration (TVM). The modes of these endogenous rhythms often vary among estuaries based on the river runoff and tidal characteristics. The present study is a pioneering attempt to depict the vertical migration pattern of zooplankton along a diel and tidal scale in a tropical, microtidal, monsoonal estuary. We observed that in spite of the prominent asymmetry in the magnitude of the river runoff between the seasons, most of the zooplankton groups exhibited strong DVM, with a clear increase in biomass and abundance in surface waters during night. The peak increase in biomass and abundance at night always synchronized with the slack periods in the tidal cycles, which differed from the general concepts of downward migration during ebb tide and upward migration during flood tide in estuarine systems. The weak currents during the slack period might have favored the effective vertical migration of the mesozooplankton community in this monsoonal estuarine system. © 2015 Society of Wetland Scientists

  7. Seasonal and diel patterns in sedimentary flux of krill fecal pellets recorded by an echo sounder

    KAUST Repository

    Røstad, Anders

    2013-11-01

    We used a moored upward-facing 200 kHz echo sounder to address sedimentation of fecal pellets (FPs) from dielly migrating Meganyctiphanes norvegica. The echo sounder was located on the bottom at 150 m depth in the Oslofjord, Norway, and was cabled to shore for continuous measurements during winter and spring. Records of sinking pellets were for the first time observed with an echo sounder. Seasonal patterns of sedimentation of krill FPs were strongly correlated with data from continuous measurement of fluorescence, which illustrate the development of the spring bloom. Sedimenting particles were first observed as fluorescence values started to increase at the end of February and continued to increase until the bloom suddenly culminated at the end of March. This collapse of the bloom was detected on the echo sounder as a pulse of slowly sinking acoustic targets over a 2 d period. Prior to this event, there was a strong diel pattern in sedimentation, which correlated, with some time lag, with the diel migration of krill foraging at night near the surface. Pellet average sinking speeds ranged between 423 m d−1 and 804 m d−1, with a strong relation to pellet target strength, which is an acoustic proxy for size. This novel approach shows that echo sounders may be a valuable tool in studies of vertical pellet flux and, thereby, carbon flux, providing temporal resolution and direct observation of the sedimentation process, which are not obtained from standard methods.

  8. Isolation, structural features and antitumor activities of sixpolysaccharides from Angelica sinensis (Oliv.) diels in vitro

    Institute of Scientific and Technical Information of China (English)

    WeiCAO; Xiao-qiangLI; Tie-hongYANG; Hui-tingFAN; Qi-bingMEI

    2005-01-01

    AIM The previous work has demonstrated that the polysaccharides of Angelica sinensis (Oliv.) Diels have significantly antitumor activity and indicated that the activity is strongly dependent on their structures. However, the relationships between the structure and the activities are still ambiguous. Thus, at present, more efforts are being expended in seeking to isolate the polysaccharides from Angelica sinensis(Oliv.) Diels, measure their structural features and antitumor activities, and elucidate structure - activity relationships of polysaccharides. METHODS The roots of Angelica sinensis ( Oliv. ) Diels were extracted With water, separated by Sephacryl S-400 and DEAE-sephadex A-25 columns and further purifled on Sephadex G-100 column.

  9. Hysteresis responses of evapotranspiration to meteorological factors at a diel timescale: patterns and causes.

    Science.gov (United States)

    Zheng, Han; Wang, Qiufeng; Zhu, Xianjin; Li, Yingnian; Yu, Guirui

    2014-01-01

    Evapotranspiration (ET) is an important component of the water cycle in terrestrial ecosystems. Understanding the ways in which ET changes with meteorological factors is central to a better understanding of ecological and hydrological processes. In this study, we used eddy covariance measurements of ET from a typical alpine shrubland meadow ecosystem in China to investigate the hysteresis response of ET to environmental variables including air temperature (Ta), vapor pressure deficit (VPD) and net radiation (Rn) at a diel timescale. Meanwhile, the simulated ET by Priestly-Taylor equation was used to interpret the measured ET under well-watered conditions. Pronounced hysteresis was observed in both Ta and VPD response curves of ET. At a similar Ta and VPD, ET was always significantly depressed in the afternoon compared with the morning. But the hysteresis response of ET to Rn was not evident. Similar hysteresis patterns were also observed in the Ta/VPD response curves of simulated ET. The magnitudes of the measured and simulated hysteresis loops showed similar seasonal variation, with relatively smaller values occurring from May to September, which agreed well with the lifetime of plants and the period of rainy season at this site. About 62% and 23% of changes in the strength of measured ET-Ta and ET-VPD loops could be explained by the changes in the strength of simulated loops, respectively. Thus, the time lag between Rn and Ta/VPD is the most important factor generating and modulating the ET-Ta/VPD hysteresis, but plants and water status also contribute to the hysteresis response of ET. Our research confirmed the different hysteresis in the responses of ET to meteorological factors and proved the vital role of Rn in driving the diel course of ET.

  10. Diel variability of feeding activity in haddock ( Melanogrammus aeglefinus ) larvae in the East Shetland area, North Sea

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Ueberschar, B.; Basford, D.;

    1999-01-01

    aeglifinus) larvae four times per day during a 10-d cruise in the northern North Sea. Feeding activity was evaluated using indices of gut fullness, prey digestive state and biochemical measurements (tryptic enzyme activity). The gut fullness and the enzyme activity indices indicated moderate to high rates...... of food consumption throughout the cruise. Time series analysis of the three indices showed significant diel variability in all indices and enabled identification of significant lags between food uptake and peak digestive enzyme activity. The typical pattern of food consumption and digestion...... was characterized by maximal ingestion of prey early in the evening (19:00 hrs) and peak digestive enzyme activity at 01:00 hrs. The time scale over which enzyme activities reacted to prey ingestion was ca. 6 h, and is consistent with expectations from controlled laboratory experiments with other larval fish...

  11. Epiphytic cyanobacteria of the seagrass Cymodocea rotundata: diversity, diel nifH expression and nitrogenase activity.

    Science.gov (United States)

    Hamisi, Mariam; Díez, Beatriz; Lyimo, Thomas; Ininbergs, Karolina; Bergman, Birgitta

    2013-06-01

    Seagrasses are photoautotrophic, ecologically important components of many globally widespread coastal ecosystems, in which combined nitrogen may limit their production. We examined the biodiversity and diazotrophic capacity of microbial epiphytes associated with the phyllosphere of the seagrass Cymodocea rotundata of the Western Indian Ocean. Light microscopy, 16S rRNA and nifH gene analysis revealed the dominance of cyanobacteria in the epiphytic microbial community. Most phylotypes were related to free-living uncultured benthic cyanobacteria, while some to cyanobacterial endosymbionts of marine diatoms. Novel and potentially diazotrophic species, some of known pantropical distribution, were also discovered. Significant diel nitrogenase activities (acetylene reduction assay) were recorded (up to 358 ± 232 nmol C2H4 g(-1) of seagrass FW h(-1)). The nifH gene expression patterns showed that heterocystous phylotypes may be the dominant diazotrophs during the day and non-heterocystous at night. These data show that C. rotundata is colonized by diverse diazotrophic cyanobacteria species and suggest that these may be beneficial partners of seagrasses in nitrogen-depleted waters. © 2013 John Wiley & Sons Ltd and Society for Applied Microbiology.

  12. Seasonal and diel effects on the activity of northern pike studied by high-resolution positional telemetry

    DEFF Research Database (Denmark)

    Baktoft, Henrik; Aarestrup, Kim; Berg, Søren;

    2012-01-01

    Temperate lakes can be ice covered for several months each year, yet little is known about the behaviour and activity of the fish during the cold season. As northern pike represents the top of the food web in many northern temperate lakes and may structure the ecosystem both directly and indirectly......, a detailed understanding of the behaviour of this species during winter is important. We continuously monitored the activity of adult northern pike (Esox lucius) in a small temperate lake from late summer to winter for two consecutive years using an automatic acoustic positional telemetry system. Four...... subsample periods representing different temperature regimes from each year were chosen for further investigation. The results revealed that pike activity was similar between seasons. In all periods, a distinct diel pattern, showing increased activity during day as compared to night, was evident. Our...

  13. Diel changes in food and feeding activity of sciaenid fishes from the South-western Atlantic, Brazil.

    Science.gov (United States)

    Soares, L S; Vazzoler, A E

    2001-05-01

    Food habits and daily feeding activity of fish populations are important ecological variables for understanding their role in the ecosystem. Diel changes in feeding activity and dietary composition of juvenile whitemouth croaker Micropogonias furnieri, shortfin corvina Isopisthus parvipinnis, shorthead drum Larimus breviceps and of juvenile and adult banded croaker Paralonchurus brasiliensis were investigated from samples taken over a 24 hours period from 4 to 5 September 1987 on the continental shelf off South-eastern Brazil. Whitemouth croaker and banded croaker had a benthic diet based on polychaetes and some caridean shrimps and showed no diel feeding pattern. Shortfin corvina and shorthead drum fed on crustaceans and teleostean fish, the former species primarily on pelagic sergestid shrimps and benthic caridean shrimps, and the latter mainly on pelagic sergestid shrimps, mysidacean and benthic caridean shrimps. Shortfin corvina is primarily a diurnal feeder, but preyed on some items only at night. Shorthead drum is a night feeder, with minimum stomach fullness values between dawn and daytime, and maximum values between dusk and night time.

  14. Diel activity and variability in habitat use of white sea bream in a temperate marine protected area.

    Science.gov (United States)

    Di Lorenzo, Manfredi; Fernández, Tomás Vega; Badalamenti, Fabio; Guidetti, Paolo; Starr, Richard M; Giacalone, Vincenzo Maximiliano; Di Franco, Antonio; D'Anna, Giovanni

    2016-05-01

    Fish populations are often comprised of individuals that use habitats and associated resources in different ways. We placed sonic transmitters in, and tracked movements of, white sea bream (Diplodus sargus sargus) in the no-take zone of a Mediterranean marine protected area: the Torre Guaceto marine protected area, (Adriatic Sea, Italy). Tagged fish displayed three types of diel activity patterns in three different habitats: sand, rocky reefs and "matte" of the seagrass Posidonia oceanica. Individuals were more active during the day than at night. Overall, white sea bream displayed a remarkable behavioural plasticity in habitat use. Our results indicate that the observed behavioural plasticity in the marine protected area could be the result of multiple ecological and environmental drivers such as size, sex and increased intra-specific competition. Our findings support the view that habitat diversity helps support high densities of fishes.

  15. Signal crayfish as zoogeomorphic agents: diel patterns of fine sediment suspension in a crayfish-affected river and the implications for fine sediment fluxes and dynamics

    Science.gov (United States)

    Rice, Stephen; Johnson, Matthew; Reeds, Jake; Longstaff, Holly; Extence, Chris

    2013-04-01

    The signal crayfish (Pacifasticus leniusculus) is a formidable invasive species that has had a deleterious impact on native freshwater fauna across Europe. We contend that the impact of this animal extends beyond ecology into geomorphology and hypothesise that crayfish are significant agents of fine sediment recruitment and mobilisation, with potentially profound impacts on water quality, substrate quality and fine sediment fluxes. Building on pioneering work by colleagues at Queen Mary University, London this poster considers the role of crayfish in fine sediment suspension in a lowland, gravel-bed river. The hypothesis that nocturnal increases in crayfish activity are associated with a greater frequency of sediment suspension events and increases in ambient turbidity, is tested. Strong diel fluctuations in water turbidity were recorded at several sites on the Brampton Arm of the River Nene in England, a river heavily populated by signal crayfish, during August and September 2012. With the exception of three summer flood events, stage measurements during the same period were essentially flat, ruling out a hydraulic cause for overnight rises in turbidity. Water samples collected at midnight and at midday at one site confirm this diel pattern for suspended sediment concentration. Higher mean turbidity values overnight are associated with an increase in the magnitude and frequency of isolated turbidity spikes or events and this is consistent with crayfish nocturnalism. In particular, we suspect that turbidity events are caused by the construction and maintenenance of burrows and by interactions between crayfish and the river bed while foraging, fighting and avoiding each other. Tying the diel SSC signal directly to crayfish activity proved difficult, but several lines of argument presented here suggest that crayfish are the most likely cause of the diel pattern. These results provide substantial support for the idea that signal crayfish are important zoogeomorphic

  16. Fine-scale differences in diel activity among nocturnal freshwater planarias (Platyhelminthes: Tricladida

    Directory of Open Access Journals (Sweden)

    Cicolani Bruno

    2011-04-01

    Full Text Available Abstract Background Although most freshwater planarias are well known photonegative organisms, their diel rhythms have never been quantified. Differences in daily activity rhythms may be particularly important for temperate-climate, freshwater planarias, which tend to overlap considerably in spatial distribution and trophic requirements. Methods Activity of stress-free, individually tested young adults of three common planarian species was recorded at 3-h intervals in a 10-d experiment under natural sunlight and photoperiod during autumnal equinox (D:L ~12:12. Individual activity status was averaged over the 10-d experiment, each tested individual thus serving as a true replicate. Twelve individuals per species were tested. Food was provided every 36 h, resulting in alternating day- and nighttime feeding events. Activity during the first post-feeding h was recorded and analyzed separately. Statistical procedures included ANOVAs, correlations, and second-order analyses of angles. Results Dugesia (= Girardia tigrina Girard 1850 exhibited clear nocturnal behavior, Dugesia (= Schmidtea polychroa Schmidt 1861 was predominantly but not exclusively nocturnal, and Polycelis tenuis Ijima 1884 was relatively more active from midnight through noon. Species-specific activity peaks were statistically similar, with peaks at dawn for P. tenuis and just before midnight for the two dugesiids; however, D. tigrina was comparatively more active in the early night hours, while D. polychroa was more active than D. tigrina during daytime. D. tigrina also responded less readily to daytime food addition. P. tenuis remained poorly active and unresponsive throughout the experiment. Individual variability in diel behavior was highest for D. polychroa and lowest for D. tigrina. P. tenuis's general low degree of activity and late activity peak in the experiment may be related to a strong reliance on external stimuli. Conclusions The tested species are mainly nocturnal

  17. Diel periodicity of pheromone release by females of Planococcus citri and Planococcus ficus and the temporal flight activity of their conspecific males

    Science.gov (United States)

    Levi-Zada, Anat; Fefer, Daniela; David, Maayan; Eliyahu, Miriam; Franco, José Carlos; Protasov, Alex; Dunkelblum, Ezra; Mendel, Zvi

    2014-08-01

    The diel periodicity of sex pheromone release was monitored in two mealybug species, Planococcus citri and Planococcus ficus (Hemiptera; Pseudococcidae), using sequential SPME/GCMS analysis. A maximal release of 2 ng/h pheromone by 9-12-day-old P. citri females occurred 1-2 h before the beginning of photophase. The highest release of pheromone by P. ficus females was 1-2 ng/2 h of 10-20-day-old females, approximately 2 h after the beginning of photophase. Mating resulted in termination of the pheromone release in both mealybug species. The temporal flight activity of the males was monitored in rearing chambers using pheromone baited delta traps. Males of both P. citri and P. ficus displayed the same flight pattern and began flying at 06:00 hours when the light was turned on, reaching a peak during the first and second hour of the photophase. Our results suggest that other biparental mealybug species display also diel periodicities of maximal pheromone release and response. Direct evaluation of the diel periodicity of the pheromone release by the automatic sequential analysis is convenient and will be very helpful in optimizing the airborne collection and identification of other unknown mealybug pheromones and to study the calling behavior of females. Considering this behavior pattern may help to develop more effective pheromone-based management strategies against mealybugs.

  18. Examining diel patterns of soil and xylem moisture using electrical resistivity imaging

    Science.gov (United States)

    Mares, Rachel; Barnard, Holly R.; Mao, Deqiang; Revil, André; Singha, Kamini

    2016-05-01

    The feedbacks among forest transpiration, soil moisture, and subsurface flowpaths are poorly understood. We investigate how soil moisture is affected by daily transpiration using time-lapse electrical resistivity imaging (ERI) on a highly instrumented ponderosa pine and the surrounding soil throughout the growing season. By comparing sap flow measurements to the ERI data, we find that periods of high sap flow within the diel cycle are aligned with decreases in ground electrical conductivity and soil moisture due to drying of the soil during moisture uptake. As sap flow decreases during the night, the ground conductivity increases as the soil moisture is replenished. The mean and variance of the ground conductivity decreases into the summer dry season, indicating drier soil and smaller diel fluctuations in soil moisture as the summer progresses. Sap flow did not significantly decrease through the summer suggesting use of a water source deeper than 60 cm to maintain transpiration during times of shallow soil moisture depletion. ERI captured spatiotemporal variability of soil moisture on daily and seasonal timescales. ERI data on the tree showed a diel cycle of conductivity, interpreted as changes in water content due to transpiration, but changes in sap flow throughout the season could not be interpreted from ERI inversions alone due to daily temperature changes.

  19. Magnesium-Dependent Active-Site Conformational Selection in the Diels-Alderase Ribozyme

    Energy Technology Data Exchange (ETDEWEB)

    Berezniak, Tomasz [University of Heidelberg; Zahran, Mai [ORNL; Imhof, Petra [University of Heidelberg; Jaeschke, Andres [Free University of Berlin; Smith, Jeremy C [ORNL

    2010-10-01

    The Diels-Alderase ribozyme, an in vitro-evolved ribonucleic acid enzyme, accelerates the formation of carbon-carbon bonds between an anthracene diene and a maleimide dienophile in a [4 + 2] cycloaddition, a reaction with broad application in organic chemistry. Here, the Diels-Alderase ribozyme is examined via molecular dynamics (MD) simulations in both crystalline and aqueous solution environments. The simulations indicate that the catalytic pocket is highly dynamic. At low Mg(2+) ion concentrations, inactive states with the catalytic pocket closed dominate. Stabilization of the enzymatically active, open state of the catalytic pocket requires a high concentration of Mg(2+) ions (e.g., 54 mM), with cations binding to specific phosphate sites on the backbone of the residues bridging the opposite strands of the pocket. The free energy profile for pocket opening at high Mg(2+) cation concentration exhibits a double minimum, with a barrier to opening of approximately 5.5 kJ/mol and the closed state approximately 3 kJ/mol lower than the open state. Selection of the open state on substrate binding leads to the catalytic activity of the ribozyme. The simulation results explain structurally the experimental observation that full catalytic activity depends on the Mg(2+) ion concentration

  20. Diel patterns of temperature, conductivity and dissolved oxygen in an Amazon floodplain lake: description of a friagem phenomenon

    Directory of Open Access Journals (Sweden)

    Pedro Caraballo

    2014-09-01

    Full Text Available AIM: The aim of this work was to study the diel stratification parameters temperature, dissolved oxygen and conductivity, providing a more detailed description of a friagem event. METHODS: the mixing behavior of the limnetic water column in Lago Catalão, an Amazon floodplain lake flooded by two of the world’s largest rivers (Solimões and Negro, was studied through diel profiling of temperature, conductivity and dissolved oxygen, between 2006 and 2007. Measurements were made every four hours at 1m depth intervals to the lake bottom. RESULTS: The water column remained stratified during most of the year with the exception of one month with low water level, when nocturnal mixing occurred and one friagem event during high water (May 2007 when an isothermal temperature profile and an atypical orthograde oxygen profile were observed. CONCLUSIONS: The friagem event, a large drop in air temperatures due to the intrusion of a polar air mass in the Amazon, constitutes an important force in the dynamics of the water column, which produces a profound redistribution of dissolved gases and solutes in the system. This is the first time that the effects of the friagem on the mixing patterns in a lowland Amazon lake have been documented in detail. The decline in air temperature, observed during the friagem event destabilized the normally stratified water column, which can be associated with an environmental disturb.

  1. Diel rhythms of feeding activity in the European catfish, Silurus glanis.

    Science.gov (United States)

    Boujard, T

    1995-10-01

    The diel rhythms of feeding activity of S. glanis held singly or in groups, and with free or time-restricted access to self-feeders is described. It was found that this this species has a strongly nocturnal feeding activity. European catfish can be trained to feed itself by day, but in such case its voluntary feed intake is reduced. When trained to feed by day, they resume their nocturnal behavior in less than 24 h when they have again free access to feed. It is also clearly evidenced that this fish species does not behave the same way when it is isolated from its congeneres rather than when it is maintained in groups, with a tendency to become arhythmic.

  2. Theoretical Evaluation of the Global and Local Electrophilicity Patterns to Characterize Hetero Diels-Alder Cycloaddition in the Synthesis of Isoxazolo[4,5-e](1,2,3,4-tetrazine)

    Institute of Scientific and Technical Information of China (English)

    SHARMA,Pratibha; KUMAR,Ashok; SINGH,Jitendra; SAHU,Vinita

    2009-01-01

    A series of substituted dienophiles 1-10 and three 1,2-diazadienes namely D-1, D-2, D-3 were chosen to understand the reactivity and selectivity of Diels-Alder cycloaddition. The global and local electrophilicity patterns have been evaluated on a series of cycloaddition reactions to assess the reaction pathways (NDAC/IEDDAC) using the absolute scale of electrophilicity proposed by Parr et aL Regional electrophilicity at the active sites of the re-agents involved in Diels-Alder processes has been described on a quantitative basis using local or regional electro-philicity index I.e. Fukui function. Good qualitative/quantitative comparison was found between molecular energy gaps and global electronic parameters, which has been employed to assess the cycloaddition pathways successfully.

  3. Diel feeding pattern and diet of rough scad Trachurus lathami Nichols, 1920 (Carangidae from the Southwestern Atlantic

    Directory of Open Access Journals (Sweden)

    Maria Raquel de Carvalho

    Full Text Available Diel changes in feeding activity and dietary composition of the rough scad Trachurus lathami were investigated through the analysis of stomach contents of 307 fish sampled over a 24-h period on the continental shelf off Ubatuba (23º 35'S 45ºW. Stomach contents were analyzed by frequency of occurrence (O%, percent number (N%, percent mass (M%, and feeding index (FI% = O% * M%. Rough scad fed on mollusks (Gastropoda, Crepidula sp., crustacean (Ostracoda, Copepoda, decapod larvae, chaetognat and teleostean fish. The main items were calanoid copepods (Eucalanus sp. and Centropages sp.. According to the analysis of the stomach fullness and prey digestion, T. lathami is both a diurnal and nocturnal feeder, showing some seasonal variation in feeding time. According to the Chronobiology concept, it was raised the hypothesis of circadian rhythm in feeding of this fish, probably synchronized by light/dark cycle.

  4. Quantum chemical study of Diels-Alder reactions catalyzed by Lewis acid activated oxazaborolidines.

    Science.gov (United States)

    Sakata, Ken; Fujimoto, Hiroshi

    2013-04-05

    The catalytic activity of Lewis acid activated oxazaborolidines in the Diels-Alder reaction between cyclopentadiene and methacrolein is investigated by using the DFT method. Oxazaborolidine is not able to coordinate to methacrolein in the absence of AlBr3 because the bonding stabilization is too small to cover the destabilization arising from the deformation of the two species. Accordingly, oxazaborolidine hardly catalyzes the cycloaddition by itself. The calculations show that the attachment of AlBr3 to the nitrogen atom of oxazaborolidine enhances the Lewis acidity of its boron center and enables it to coordinate to methacrolein. When the AlBr3-assisted oxazaborolidine is once coordinated, the catalytic activity originates mainly from the oxazaborolidine framework, and to a smaller extent from the attached AlBr3 part. The Lewis acid AlBr3 plays an additional role to facilitate the reaction by reducing the overlap repulsion between the diene and the dienophile. The attachment of AlBr3 to the oxygen atom, another Lewis basic site in oxazaborolidine, also gives a stable AlBr3-oxazaborolidine complex, but the reaction catalyzed by this complex is not preferred to that catalyzed by the complex in which AlBr3 is attached to the nitrogen atom. The electrophilicity of boron center in oxazaborolidine and those in the AlBr3-oxazaborolidine complexes are compared in terms of localized reactive orbitals.

  5. Surface patterning with natural and synthetic polymers via an inverse electron demand Diels-Alder reaction employing microcontact chemistry.

    Science.gov (United States)

    Roling, Oliver; Mardyukov, Artur; Lamping, Sebastian; Vonhören, Benjamin; Rinnen, Stefan; Arlinghaus, Heinrich F; Studer, Armido; Ravoo, Bart Jan

    2014-10-21

    Bioorthogonal ligation methods are the focus of current research due to their versatile applications in biotechnology and materials science for post-functionalization and immobilization of biomolecules. Recently, inverse electron demand Diels-Alder (iEDDA) reactions employing 1,2,4,5-tetrazines as electron deficient dienes emerged as powerful tools in this field. We adapted iEDDA in microcontact chemistry (μCC) in order to create enhanced surface functions. μCC is a straightforward soft-lithography technique which enables fast and large area patterning with high pattern resolutions. In this work, tetrazine functionalized surfaces were reacted with carbohydrates conjugated with norbornene or cyclooctyne acting as strained electron rich dienophiles employing μCC. It was possible to create monofunctional as well as bifunctional substrates which were specifically addressable by proteins. Furthermore we structured glass supported alkene terminated self-assembled monolayers with a tetrazine conjugated atom transfer radical polymerization (ATRP) initiator enabling surface grafted polymerizations of poly(methylacrylate) brushes. The success of the surface initiated iEDDA via μCC as well as the functionalization with natural and synthetic polymers was verified via fluorescence and optical microscopy, X-ray photoelectron spectroscopy (XPS), time-of-flight secondary ion mass spectrometry (ToF-SIMS), atomic force microscopy (AFM) and attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR).

  6. Seasonal and Diel Vocalization Patterns of Antarctic Blue Whale (Balaenoptera musculus intermedia) in the Southern Indian Ocean: A Multi-Year and Multi-Site Study

    Science.gov (United States)

    Leroy, Emmanuelle C.; Samaran, Flore; Bonnel, Julien; Royer, Jean-Yves

    2016-01-01

    Passive acoustic monitoring is an efficient way to provide insights on the ecology of large whales. This approach allows for long-term and species-specific monitoring over large areas. In this study, we examined six years (2010 to 2015) of continuous acoustic recordings at up to seven different locations in the Central and Southern Indian Basin to assess the peak periods of presence, seasonality and migration movements of Antarctic blue whales (Balaenoptera musculus intermedia). An automated method is used to detect the Antarctic blue whale stereotyped call, known as Z-call. Detection results are analyzed in terms of distribution, seasonal presence and diel pattern of emission at each site. Z-calls are detected year-round at each site, except for one located in the equatorial Indian Ocean, and display highly seasonal distribution. This seasonality is stable across years for every site, but varies between sites. Z-calls are mainly detected during autumn and spring at the subantarctic locations, suggesting that these sites are on the Antarctic blue whale migration routes, and mostly during winter at the subtropical sites. In addition to these seasonal trends, there is a significant diel pattern in Z-call emission, with more Z-calls in daytime than in nighttime. This diel pattern may be related to the blue whale feeding ecology. PMID:27828976

  7. Seasonal and Diel Vocalization Patterns of Antarctic Blue Whale (Balaenoptera musculus intermedia) in the Southern Indian Ocean: A Multi-Year and Multi-Site Study.

    Science.gov (United States)

    Leroy, Emmanuelle C; Samaran, Flore; Bonnel, Julien; Royer, Jean-Yves

    2016-01-01

    Passive acoustic monitoring is an efficient way to provide insights on the ecology of large whales. This approach allows for long-term and species-specific monitoring over large areas. In this study, we examined six years (2010 to 2015) of continuous acoustic recordings at up to seven different locations in the Central and Southern Indian Basin to assess the peak periods of presence, seasonality and migration movements of Antarctic blue whales (Balaenoptera musculus intermedia). An automated method is used to detect the Antarctic blue whale stereotyped call, known as Z-call. Detection results are analyzed in terms of distribution, seasonal presence and diel pattern of emission at each site. Z-calls are detected year-round at each site, except for one located in the equatorial Indian Ocean, and display highly seasonal distribution. This seasonality is stable across years for every site, but varies between sites. Z-calls are mainly detected during autumn and spring at the subantarctic locations, suggesting that these sites are on the Antarctic blue whale migration routes, and mostly during winter at the subtropical sites. In addition to these seasonal trends, there is a significant diel pattern in Z-call emission, with more Z-calls in daytime than in nighttime. This diel pattern may be related to the blue whale feeding ecology.

  8. The diel vertical migration patterns and individual swimming behavior of overwintering sprat Sprattus sprattus

    Science.gov (United States)

    Solberg, Ingrid; Kaartvedt, Stein

    2017-02-01

    We addressed the behavioral patterns and DVM dynamics of sprat overwintering in a Norwegian fjord (150 m) with increasing hypoxia by depth. An upward-facing echosounder deployed at the bottom and cabled to shore provided 4 months of continuous acoustic data. This enabled detailed studies of individual behavior, specifically allowing assessment of individual vertical migrations at dusk and dawn in relation to light, analysis of so-called rise-and-sink swimming, and investigation of the sprat' swimming activity and behavior in severely hypoxic waters. Field campaigns supplemented the acoustic studies. The acoustic records showed that the main habitat for sprat was the upper ∼65 m where oxygen concentrations were ⩾0.7 mL O2 L-1. The sprat schooled at ∼50 m during daytime and initiated an upward migration about 1 h prior to sunset. While some sprat migrated to surface waters, other individuals interrupted the ascent when at ∼20-30 m, and returned to deeper waters ∼20-50 min after sunset. Sprat at depth was on average larger, yet individuals made excursions to- and from upper layers. Sprat were swimming in a "rise and sink" pattern at depth, likely related to negative buoyancy. Short-term dives into waters with less than 0.45 mL O2 L-1 were interpreted as feeding forays for abundant overwintering Calanus spp. The deep group of sprat initiated a dawn ascent less than 1 h before sunrise, ending at 20-30 m where they formed schools. They subsequently returned to deeper waters about ∼20 min prior to sunrise. Measurements of surface light intensities indicated that the sprat experienced lower light levels in upper waters at dawn than at dusk. The vertical swimming speed varied significantly between the behavioral tasks. The mixed DVM patterns and dynamic nocturnal behavior of sprat persisted throughout winter, likely shaped by individual strategies involving optimized feeding and predator avoidance, as well as relating to temperature, hypoxia and negative

  9. The diel vertical migration patterns and individual swimming behavior of overwintering sprat Sprattus sprattus

    KAUST Repository

    Solberg, Ingrid

    2016-11-27

    We addressed the behavioral patterns and DVM dynamics of sprat overwintering in a 150 m Norwegian fjord with increasing hypoxia by depth. An upward-facing echosounder deployed at the bottom and cabled to shore provided 4 months of continuous acoustic data. This enabled detailed studies of individual behavior, specifically allowing assessment of individual vertical migrations at dusk and dawn in relation to light, analysis of so-called rise-and-sink swimming, and investigation of the sprat’ swimming activity and behavior in severely hypoxic waters. Field campaigns supplemented the acoustic studies. The acoustic records showed that the main habitat for sprat was the upper ∼ 65 m where oxygen concentrations were ⩾ 0.7 mL O2 L-1. The sprat schooled at ∼ 50 m during daytime and initiated an upward migration about 1 hour prior to sunset. While some sprat migrated to surface waters, other individuals interrupted the ascent when at ∼20-30 m, and returned to deeper waters ∼ 20-50 min after sunset. Sprat at depth was on average larger, yet individuals made excursions to- and from upper layers. Sprat were swimming in a “rise and sink” pattern at depth, likely related to negative buoyancy. Short-term dives into waters with less than 0.45 mL O2 L-1 were interpreted as feeding forays for abundant overwintering Calanus spp. The deep group of sprat initiated a dawn ascent less than 1 hour before sunrise, ending at 20-30 m where they formed schools. They subsequently returned to deeper waters about ∼20 min prior to sunrise. Measurements of surface light intensities indicated that the sprat experienced lower light levels in upper waters at dawn than at dusk. The vertical swimming speed varied significantly between the behavioral tasks. The mixed DVM patterns and dynamic nocturnal behavior of sprat persisted throughout winter, likely shaped by individual strategies involving optimized feeding and predator avoidance, as well as relating to temperature, hypoxia and

  10. Effects of hydrographic variability on the spatial, seasonal and diel diving patterns of southern elephant seals in the eastern Weddell Sea.

    Directory of Open Access Journals (Sweden)

    Martin Biuw

    Full Text Available Weddell Sea hydrography and circulation is driven by influx of Circumpolar Deep Water (CDW from the Antarctic Circumpolar Current (ACC at its eastern margin. Entrainment and upwelling of this high-nutrient, oxygen-depleted water mass within the Weddell Gyre also supports the mesopelagic ecosystem within the gyre and the rich benthic community along the Antarctic shelf. We used Conductivity-Temperature-Depth Satellite Relay Data Loggers (CTD-SRDLs to examine the importance of hydrographic variability, ice cover and season on the movements and diving behavior of southern elephant seals in the eastern Weddell Sea region during their overwinter feeding trips from Bouvetøya. We developed a model describing diving depth as a function of local time of day to account for diel variation in diving behavior. Seals feeding in pelagic ice-free waters during the summer months displayed clear diel variation, with daytime dives reaching 500-1500 m and night-time targeting of the subsurface temperature and salinity maxima characteristic of CDW around 150-300 meters. This pattern was especially clear in the Weddell Cold and Warm Regimes within the gyre, occurred in the ACC, but was absent at the Dronning Maud Land shelf region where seals fed benthically. Diel variation was almost absent in pelagic feeding areas covered by winter sea ice, where seals targeted deep layers around 500-700 meters. Thus, elephant seals appear to switch between feeding strategies when moving between oceanic regimes or in response to seasonal environmental conditions. While they are on the shelf, they exploit the locally-rich benthic ecosystem, while diel patterns in pelagic waters in summer are probably a response to strong vertical migration patterns within the copepod-based pelagic food web. Behavioral flexibility that permits such switching between different feeding strategies may have important consequences regarding the potential for southern elephant seals to adapt to

  11. Evaluation of diel patterns of relative changes in cell turgor of tomato plants using leaf patch clamp pressure probes.

    Science.gov (United States)

    Lee, Kang M; Driever, Steven M; Heuvelink, Ep; Rüger, Simon; Zimmermann, Ulrich; de Gelder, Arie; Marcelis, Leo F M

    2012-12-01

    Relative changes in cell turgor of leaves of well-watered tomato plants were evaluated using the leaf patch clamp pressure probe (LPCP) under dynamic greenhouse climate conditions. LPCP changes, a measure for relative changes in cell turgor, were monitored at three different heights of transpiring and non-transpiring leaves of tomato plants on sunny and cloudy days simultaneously with whole plant water uptake. Clear diel patterns were observed for relative changes of cell turgor of both transpiring and non-transpiring leaves, which were stronger on sunny days than on cloudy days. A clear effect of canopy height was also observed. Non-transpiring leaves showed relative changes in cell turgor that closely followed plant water uptake throughout the day. However, in the afternoon the relative changes of cell turgor of the transpiring leaves displayed a delayed response in comparison to plant water uptake. Subsequent recovery of cell turgor loss of transpiring leaves during the following night appeared insufficient, as the pre-dawn turgescent state similar to the previous night was not attained. Copyright © Physiologia Plantarum 2012.

  12. Diel dualism in the energy consumption of the European catfish Silurus glanis.

    Science.gov (United States)

    Slavík, O; Horký, P

    2012-12-01

    Twenty individuals of the largest European freshwater predator, the European catfish Silurus glanis, were tagged with electromyogram (EMG) physiological telemetry sensors. The fish were observed during diel cycles during the spring and summer in the Elbe and Berounka Rivers, Czech Republic. The purpose of this study was to determine whether diel dualism in the activity of S. glanis occurs naturally or is induced by the laboratory environment and by the conditions occurring in aquaculture. The results obtained from the riverine environment tended to show dualism in the use of the light and dark phases of the day because 35% of the individuals varied from a site-specific common diel activity pattern. The EMG values increased in accordance with the mass (M) of the fish. To eliminate the influence of M on individual energy consumption, the EMG records were analysed in terms of the EMG:M ratios. High individual variability was found in these ratios. The diel activity pattern of the individuals with relatively high energy consumption differed from the common diel activity pattern. In contrast, the fish that adopted the common diel activity pattern displayed relatively low energy consumption. The results of this study indicated that dualism and energy consumption are related. The EMG values also varied with the values of the environmental variables. Increasing temperature was associated with high EMG values, whereas the EMG values decreased with increasing flow.

  13. Seasonal and diel patterns of total gaseous mercury concentration in the atmosphere of the Central Valley of Costa Rica

    Energy Technology Data Exchange (ETDEWEB)

    Castillo, Aylin; Valdes, Juan; Sibaja, Jose; Vega, Ilena; Alfaro, Rosa; Morales, Jose; Esquivel, Germain; Barrantes, Elisa [Laboratory for Atmospheric Chemistry, LAQAT-UNA, Universidad Nacional, P.O. Box 86-3000, Heredia (Costa Rica); Black, Paleah [Department of Biology, University of Ottawa, P.O. Box 450 Station A, Ottawa, Ontario, K1N 6N5 (Canada); Lean, David, E-mail: drslean@gmail.com [P.O. Box 309, Apsley, Ontario, K0L 1A0 (Canada)

    2011-02-15

    temperature is 20 deg. C. With the onset of the wet season TGM increased from typical values near 10 to 905 ng m{sup -3}. Measurements made within 5 km of the Poas volcano were higher than at Heredia at that time. Diel values measured at University site increased until midday along with temperature and radiation. Relative humidity showed a reciprocal pattern. It was found that high values of TGM were not related to wind velocity or direction. The strong diel pattern increased with sunrise, peaked at midday and was lowest during the night time. It would seem that Hg{sup 0} from the volcano is oxidized and is deposited to the soils during the dry season when winds are blowing from the volcano. With the onset of heavy rains in April, Hg in the soil is reduced and re-volatilized resulting in the high levels in the atmosphere. Values at other volcano sites were provided. The role of atmospheric pollutants such as H{sub 2}O{sub 2} and O{sub 3} should be included in future studies as they may result in oxidation of reduced Hg. The instability in the air masses may also be a factor and local pollution sources may result in high levels that is emitted from the volcanoes of Hg being circulated to ground level as radiation intensity increases.

  14. Diel vertical migration patterns in two populations of Chaoborus flavicans larvae (Diptera: Chaoboridae in response to fish kairomones

    Directory of Open Access Journals (Sweden)

    Takayuki HANAZATO

    2008-08-01

    Full Text Available Diel vertical migration (DVM of larvae of the phantom midge Chaoborus flavicans (Diptera: Chaoboridae inhabiting a fishless pond and a fish-abundant lake (Lake Nakanuma was studied in the field and in the laboratory. In the fishless pond, dissolved oxygen concentration and water temperature were homogeneously distributed in the vertical profiles and Chaoborus larvae did not show DVM. In contrast, there was thermal stratification and an anoxic layer in Lake Nakanuma, and 2nd, 3rd and 4th instar Chaoborus larvae exhibited DVM. Fourth instar Chaoborus larvae collected from the two populations were introduced into thermally stratified acrylic tubes containing 'fish water' (water conditioned by fish and containing only the fish 'smell' or control water free of fish smell after a two-day acclimatization, and the larval positions in the tubes were analysed during the day and at night. The two populations of Chaoborus larvae showed different DVM patterns in the control water: the larvae from Lake Nakanuma exhibited DVM, whereas those from the fishless pond did not. Chaoborus larvae from Lake Nakanuma responded to the fish kairomones, exhibiting marked DVM in the fish water, whereas little response to the fish smell was recognized in the larvae from the fishless pond. The presence of a difference in response between the two populations implies that they had genetically different patterns of expression of DVM and thus different behavioural responses to the fish smell. The fish smell tended to cause the Chaoborus larvae in the tubes to increase their depth, during both the day and night. The effects of the fish smell became ambiguous with time, suggesting microbial degradation of the fish kairomones.

  15. Experimental evidence for diel δ15N-patterns in different tissues, xylem and phloem saps of castor bean (Ricinus communis L.).

    Science.gov (United States)

    Peuke, A D; Gessler, A; Tcherkez, G

    2013-12-01

    Nitrogen isotope signatures in plants might give insights in the metabolism and allocation of nitrogen. To obtain a deeper understanding of the modifications of the nitrogen isotope signatures, we determined δ(15)N in transport saps and in different fractions of leaves, axes and roots during a diel course along the plant axis. The most significant diel variations were observed in xylem and phloem saps where δ(15)N was significantly higher during the day compared with during the night. However in xylem saps, this was observed only in the canopy, but not at the hypocotyl positions. In the canopy, δ(15)N was correlated fairly well between phloem and xylem saps. These variations in δ(15)N in transport saps can be attributed to nitrate reduction in leaves during the photoperiod as well as to (15)N-enriched glutamine acting as transport form of N. δ(15)N of the water soluble fraction of roots and leaves partially affected δ(15)N of phloem and xylems saps. δ(15)N patterns are likely the result of a complex set of interactions and N-fluxes between plant organs. Furthermore, the natural nitrogen isotope abundance in plant tissue is not constant during the diel course - a fact that needs to be taken into account when sampling for isotopic studies.

  16. Identification, Characterization, and Diel Pattern of Expression of Canonical Clock Genes in Nephrops norvegicus (Crustacea: Decapoda) Eyestalk

    Science.gov (United States)

    Sbragaglia, Valerio; Lamanna, Francesco; M. Mat, Audrey; Rotllant, Guiomar; Joly, Silvia; Ketmaier, Valerio; de la Iglesia, Horacio O.; Aguzzi, Jacopo

    2015-01-01

    The Norway lobster, Nephrops norvegicus, is a burrowing decapod with a rhythmic burrow emergence (24 h) governed by the circadian system. It is an important resource for European fisheries and its behavior deeply affects its availability. The current knowledge of Nephrops circadian biology is phenomenological as it is currently the case for almost all crustaceans. In attempt to elucidate the putative molecular mechanisms underlying circadian gene regulation in Nephrops, we used a transcriptomics approach on cDNA extracted from the eyestalk, a structure playing a crucial role in controlling behavior of decapods. We studied 14 male lobsters under 12–12 light-darkness blue light cycle. We used the Hiseq 2000 Illumina platform to sequence two eyestalk libraries (under light and darkness conditions) obtaining about 90 millions 100-bp paired-end reads. Trinity was used for the de novo reconstruction of transcriptomes; the size at which half of all assembled bases reside in contigs (N50) was equal to 1796 (light) and 2055 (darkness). We found a list of candidate clock genes and focused our attention on canonical ones: timeless, period, clock and bmal1. The cloning of assembled fragments validated Trinity outputs. The putative Nephrops clock genes showed high levels of identity (blastx on NCBI) with known crustacean clock gene homologs such as Eurydice pulchra (period: 47%, timeless: 59%, bmal1: 79%) and Macrobrachium rosenbergii (clock: 100%). We also found a vertebrate-like cryptochrome 2. RT-qPCR showed that only timeless had a robust diel pattern of expression. Our data are in accordance with the current knowledge of the crustacean circadian clock, reinforcing the idea that the molecular clockwork of this group shows some differences with the established model in Drosophila melanogaster. PMID:26524198

  17. Identification, Characterization, and Diel Pattern of Expression of Canonical Clock Genes in Nephrops norvegicus (Crustacea: Decapoda Eyestalk.

    Directory of Open Access Journals (Sweden)

    Valerio Sbragaglia

    Full Text Available The Norway lobster, Nephrops norvegicus, is a burrowing decapod with a rhythmic burrow emergence (24 h governed by the circadian system. It is an important resource for European fisheries and its behavior deeply affects its availability. The current knowledge of Nephrops circadian biology is phenomenological as it is currently the case for almost all crustaceans. In attempt to elucidate the putative molecular mechanisms underlying circadian gene regulation in Nephrops, we used a transcriptomics approach on cDNA extracted from the eyestalk, a structure playing a crucial role in controlling behavior of decapods. We studied 14 male lobsters under 12-12 light-darkness blue light cycle. We used the Hiseq 2000 Illumina platform to sequence two eyestalk libraries (under light and darkness conditions obtaining about 90 millions 100-bp paired-end reads. Trinity was used for the de novo reconstruction of transcriptomes; the size at which half of all assembled bases reside in contigs (N50 was equal to 1796 (light and 2055 (darkness. We found a list of candidate clock genes and focused our attention on canonical ones: timeless, period, clock and bmal1. The cloning of assembled fragments validated Trinity outputs. The putative Nephrops clock genes showed high levels of identity (blastx on NCBI with known crustacean clock gene homologs such as Eurydice pulchra (period: 47%, timeless: 59%, bmal1: 79% and Macrobrachium rosenbergii (clock: 100%. We also found a vertebrate-like cryptochrome 2. RT-qPCR showed that only timeless had a robust diel pattern of expression. Our data are in accordance with the current knowledge of the crustacean circadian clock, reinforcing the idea that the molecular clockwork of this group shows some differences with the established model in Drosophila melanogaster.

  18. Microwave-Mediated Hetero Diels-Alder reaction: Synthesis of biologically active compounds

    OpenAIRE

    D’Aurizio, Antonio

    2009-01-01

    Heterocyclic compounds represent almost two-thirds of all the known organic compounds: they are widely distributed in nature and play a key role in a huge number of biologically important molecules including some of the most significant for human beings. A powerful tool for the synthesis of such compounds is the hetero Diels-Alder reaction (HDA), that involve a [4+2] cycloaddition reaction between heterodienes and suitable dienophiles. Among heterodienes to be used in such six-membered ...

  19. Diel feeding pattern and diet of rough scad Trachurus lathami Nichols, 1920 (Carangidae from the Southwestern Atlantic

    Directory of Open Access Journals (Sweden)

    Maria Raquel de Carvalho

    2006-12-01

    Full Text Available Diel changes in feeding activity and dietary composition of the rough scad Trachurus lathami were investigated through the analysis of stomach contents of 307 fish sampled over a 24-h period on the continental shelf off Ubatuba (23º 35'S 45ºW. Stomach contents were analyzed by frequency of occurrence (O%, percent number (N%, percent mass (M%, and feeding index (FI% = O% * M%. Rough scad fed on mollusks (Gastropoda, Crepidula sp., crustacean (Ostracoda, Copepoda, decapod larvae, chaetognat and teleostean fish. The main items were calanoid copepods (Eucalanus sp. and Centropages sp.. According to the analysis of the stomach fullness and prey digestion, T. lathami is both a diurnal and nocturnal feeder, showing some seasonal variation in feeding time. According to the Chronobiology concept, it was raised the hypothesis of circadian rhythm in feeding of this fish, probably synchronized by light/dark cycle.O estudo da dieta e do padrão diário e sazonal de atividade alimentar do chicharro Trachurus lathami foi realizado através de análises dos conteúdos estomacais de 307 peixes amostrados em estações fixas de coleta de 24 horas na plataforma continental ao largo de Ubatuba (23º 35'S 45ºW. Os conteúdos estomacais foram analisados através da freqüência numérica (N%, massa porcentual (M% e freqüência de ocorrência (O% dos itens alimentares, e índice alimentar (O% * M%. A espécie caracterizou-se por ingerir principalmente copépodes calanóides (ex. Eucalanus sp. e Centropages sp., além de outros crustáceos (Ostracoda, larva de decápodes, moluscos (Gastropoda: Crepidula sp., quetognatos e peixes teleósteos. De acordo com o grau de repleção estomacal e grau de digestão das presas, T. lathami ingeriu alimento tanto na fase clara quanto na fase escura do dia, apresentando variação sazonal no horário de tomada de alimento. De acordo com os conceitos da Cronobiologia foi levantada a hipótese de ritmo circadiano na atividade

  20. Diel biogeochemical processes in terrestrial waters

    Science.gov (United States)

    Compiled and Edited by Nimick, David A.; Gammons, Christopher H.

    2011-01-01

    Many biogeochemical processes in rivers and lakes respond to the solar photocycle and produce persistent patterns of measureable phenomena that exhibit a day-night, or 24-h, cycle. Despite a large body of recent literature, the mechanisms responsible for these diel fluctuations are widely debated, with a growing consensus that combinations of physical, chemical, and biological processes are involved. These processes include streamflow variation, photosynthesis and respiration, plant assimilation, and reactions involving photochemistry, adsorption and desorption, and mineral precipitation and dissolution. Diel changes in streamflow and water properties such as temperature, pH, and dissolved oxygen concentration have been widely recognized, and recently, diel studies have focused more widely by considering other constituents such as dissolved and particulate trace metals, metalloids, rare earth elements, mercury, organic matter, dissolved inorganic carbon (DIC), and nutrients. The details of many diel processes are being studied using stable isotopes, which also can exhibit diel cycles in response to microbial metabolism, photosynthesis and respiration, or changes in phase, speciation, or redox state. In addition, secondary effects that diel cycles might have, for example, on biota or in the hyporheic zone are beginning to be considered. This special issue is composed primarily of papers presented at the topical session "Diurnal Biogeochemical Processes in Rivers, Lakes, and Shallow Groundwater" held at the annual meeting of the Geological Society of America in October 2009 in Portland, Oregon. This session was organized because many of the growing number of diel studies have addressed just a small part of the full range of diel cycling phenomena found in rivers and lakes. This limited focus is understandable because (1) fundamental aspects of many diel processes are poorly understood and require detailed study, (2) the interests and expertise of individual

  1. Persistent diel melatonin rhythmicity during the Arctic summer in free-living willow warblers.

    Science.gov (United States)

    Silverin, Bengt; Gwinner, Eberhard; Van't Hof, Thomas J; Schwabl, Ingrid; Fusani, Leonida; Hau, Michaela; Helm, Barbara

    2009-06-01

    Arctic environments are challenging for circadian systems. Around the solstices, the most important zeitgeber, the change between night and day, is reduced to minor fluctuations in light intensities. However, many species including songbirds nonetheless show clear diel activity patterns. Here we examine the possible physiological basis underlying diel rhythmicity under continuous Arctic summer light. Rhythmic secretion of the hormone melatonin constitutes an important part of the songbird circadian system and its experimental suppression, e.g., by constant light, usually leads to behavioral arrhythmia. We therefore studied melatonin patterns in a free-living migratory songbird, the willow warbler (Phylloscopus trochilus), that maintains diel activity during the Arctic summer. We compared melatonin profiles during late spring and summer solstice in two Swedish populations from the south (58 degrees N) and near the Arctic circle (66 degrees N). We found the northern Swedish population maintained clear diel changes in melatonin secretion during the summer solstice, although peak concentrations were lower than in southern Sweden. Melatonin levels were highest before midnight and in good accordance with periods of reduced activity. The maintenance of diel melatonin rhythmicity under conditions of continuous light may be one of the physiological mechanisms that enables continued functioning of the circadian system.

  2. Origins of the Unfavorable Activation and Reaction Energies of 1-Azadiene Heterocycles Compared to 2-Azadiene Heterocycles in Diels-Alder Reactions.

    Science.gov (United States)

    Fell, Jason S; Martin, Blanton N; Houk, K N

    2017-02-17

    The reactivities of butadiene, cyclopentadiene, furan, thiophene, pyrrole, and their 1-aza- and 2-aza-derivatives in Diels-Alder reactions with ethylene and fumaronitrile were investigated with density functional theory (M06-2X/6-311G(d,p)). The activation free energies for the Diels-Alder reactions of cyclic 1-azadienes are 10-14 kcal mol(-1) higher than those of cyclic 2-azadienes, and the reaction free energies are 17-20 kcal mol(-1) more endergonic. The distortion/interaction model shows that the increased activation energies of cyclic 1-azadienes originate from increased transition state distortion energies and unfavorable interaction energies, arising from addition to the nitrogen terminus of the C═N bond.

  3. General human activity patterns

    CERN Document Server

    Mollgaard, Anders; Mathiesen, Joachim

    2016-01-01

    We investigate the dynamics and interplay between human communication, movement, and social proximity by analyzing data collected from smartphones distributed among 638 individuals. The main question we consider is: to what extent do individuals act according to patterns shared across an entire population? Based on statistics of the entire population, we successfully predict 71\\% of the activity and 85\\% of the inactivity involved in communication, movement, and social proximity. We find that individual level statistics only result in marginally better predictions, indicating a high degree of shared activity patterns across the population. Finally, we predict short-term activity patterns using a generalized linear model, which suggests that a simple linear description might be sufficient to explain a wide range of actions, whether they be of social or of physical character.

  4. Diel and seasonal distribution patterns of eggs, embryos and larvae of Twaite shad Alosa fallax fallax (Lacépède, 1803) in a lowland tidal river

    Science.gov (United States)

    Esteves, Eduardo; Pedro Andrade, José

    2008-09-01

    The anadromous Twaite shad Alosa fallax fallax (Lacépède, 1803) is globally classified as "Data Deficient" by the IUCN but the Instituto de Conservação da Natureza, Portugal, classified the species as "Vulnerable". In this study, the aims were to describe the putative diel, seasonal and inter-annual patterns of distribution and abundance of Twaite shad early life-history stages in a lowland tidal river, River Mira (south Portugal), and to examine how changes in temperature, rainfall, microplankton biomass, potential prey and competitors' predator abundance affect the distribution patterns using generalised additive models (GAM). Twaite shad yolk-sac larvae were collected indiscriminately at various times of day while larvae were more common during daylight hours in comparison to samples collected during the night, independently of tide. Moreover, A. f. fallax eggs, embryos and larvae were found in samples from late-March to mid-June. Peak densities were observed around late-April for eggs, mid-May for embryos and mid to late-May for larvae. The observed among- and within-year changes in abundance of Twaite shad embryos and larvae were related, through GAM, with a combination of environmental covariates, mainly in a non-linear way.

  5. Diel variation in the catch of fishes and penaeid shrimps in a tropical estuary

    Science.gov (United States)

    Stoner, Allan W.

    1991-07-01

    In Laguna Joyuda, Puerto Rico, 24-h trawl surveys were conducted to test the hypothesis that there is no diel variation in the catch rate of fishes and penaeid shrimps in a turbid, microtidal estuary relatively free of visual predation. The null hypothesis was not rejected for the two most abundant fishes in the lagoon, Eucinostomus gula (Gerreidae) and Achirus lineatus (Bothidae). Conversely, the total number of fishes, Diapterus rhombeus (Gerreidae), and the engraulids Anchoa cubana and A. hepsetus were collected in significantly higher numbers during hours of darkness. Total penaeid catch was significantly higher in night than in day collections. The most abundant species were Penaeus notialis and P. subtilis, both of which appeared to be strong daytime burrowers. Small penaeids demonstrated greater diel variation in trawl capture rate than larger (subadult) shrimps. Diel variation in capture rate was related to habitat associations of individual species. Fauna resident in the very turbid lagoon demonstrated no diel variation in activity patterns and trawl susceptibility. Those species which spend only the early part of their lives in the lagoon, or live in both turbid and clear water, had significant diel variation in activity and trawl catchability.

  6. Diel variability of feeding activity in haddock ( Melanogrammus aeglefinus ) larvae in the East Shetland area, North Sea

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Ueberschar, B.; Basford, D.

    1999-01-01

    Investigations of factors affecting feeding success in fish larvae require knowledge of the scales of variability of the feeding process itself and the indices used to assess this variability. In this study, we measured short-term (diel) variability in feeding rates of wild haddock (Melanogrammus...

  7. Synthesis of new series of 5,6-dihydro-4H-1,2-oxazines via hetero Diels-Alder reaction and evaluation of antimicrobial activity.

    Science.gov (United States)

    Manjula, M K; Rai, K M L; Gaonkar, S L; Raveesha, K A; Satish, S

    2009-01-01

    A new series of 5,6-dihydro-4H-1,2-oxazines were synthesized via hetero Diels-Alder reaction of alpha-nitrosoolefins with alkenes. alpha-Nitrosoolefins were generated from ketoximes by the action of chloramine-T. The newly synthesized compounds were characterized with IR, NMR, elemental analysis and screened for their antimicrobial activity; they exhibited excellent antimicrobial activity. The minimal inhibitory concentration of the compounds was in the range of 10-35 microg ml(-1) for bacteria and 10-40 microg ml(-1) for fungi.

  8. Sources of diel variation in energetic physiology in an Arctic-breeding, diving seaduck.

    Science.gov (United States)

    Steenweg, Rolanda J; Hennin, Holly L; Bêty, Joël; Gilchrist, H Grant; Williams, Tony D; Crossin, Glenn T; Love, Oliver P

    2015-05-15

    Diel variation in baseline glucocorticoid (GC) secretion influences energetics and foraging behaviors. In temperate breeding, diurnal vertebrates, studies have shown that daily patterns of baseline GC secretion are influenced by environmental photoperiod, with baseline GCs peaking prior to sunrise to stimulate waking and foraging behaviors. Measures of physiological energy acquisition are also expected to peak in response to foraging activity, but their relationship to GC levels have not been well studied. In contrast to temperate breeding species, virtually nothing is known about diel GC and energetic metabolite secretion in Arctic breeding species, which experience almost constant photoperiods in spring and summer. Using a ten-year dataset, we examined the daily, 24-h pattern of baseline corticosterone (CORT) and triglyceride (TRIG) secretion in approximately 800 female pre-breeding Arctic-nesting common eiders (Somateria mollissima). We related these traits to environmental photoperiod and to tidal cycle. In contrast to temperate breeding species, we found that that neither time of day nor tidal trend predicted diel variation in CORT or TRIG secretion in Arctic-breeding eiders. Given the narrow window of opportunity for breeding in polar regions, we suggest that eiders must decouple their daily foraging activity from light and tidal cycles if they are to accrue sufficient energy for successful breeding. As CORT is known to influence foraging behavior, the absence of a distinct diel pattern of CORT secretion may therefore be an adaptation to optimize reproductive investment and likelihood for success in some polar-breeding species.

  9. Enantio- and periselective nitroalkene Diels-Alder reaction.

    Science.gov (United States)

    Narcis, Maurice J; Sprague, Daniel J; Captain, Burjor; Takenaka, Norito

    2012-12-14

    The periselective Diels-Alder reaction of 5-substituted pentamethylcyclopentadienes and nitroethylene has been realized by helical-chiral hydrogen bond donor catalysts. To our knowledge, this represents the first asymmetric catalytic nitroalkene Diels-Alder reaction via activation of nitroalkene, and thus establishes its proof-of-principle.

  10. Diel vertical migration patterns of three zooplankton populations in a Chilean lake Patrones de migración vertical de tres poblaciones de zooplancton en un lago chileno

    Directory of Open Access Journals (Sweden)

    RODRIGO RAMOS-JILIBERTO

    2004-03-01

    Full Text Available In this work we analyzed the depth-distribution, at noon and midnight, of three zooplankton populations which are common inhabitants of lakes from central Chile and coexist in lake El Plateado. The species were Tumeodiaptomus diabolicus, Diaphanosoma chilense and Bosmina longirostris. Also, we analyzed the association between the depth-specific abundances of the groups and the depth-specific temperature and oxygen values during the sampling period. Our results show that: (1 the three population exhibited diel vertical migration during part of the year; (2 T. diabolicus and D. chilense exhibited the normal pattern of vertical migration, and B. longirostris presented both the normal and the reverse pattern; (3 for all species and most dates, zooplankters experience significant decreases in oxygen exposure as a consequence of downward migration. Temperature costs are less important but present in T. diabolicus and D. chilense during part of the yearEn este trabajo analizamos la distribución en profundidad, a mediodía y medianoche, de tres poblaciones de zooplancton que son habitantes comunes de los lagos de Chile central, y que coexisten en el lago El Plateado. Las especies fueron Tumeodiaptomus diabolicus, Diaphanosoma chilense y Bosmina longirostris. También analizamos la asociación entre las abundancias profundidad-específicas de los grupos y los valores profundidad-específicos de temperatura y oxígeno durante el periodo de muestreo. Nuestros resultados muestran que: (1 las tres poblaciones exhibieron migración vertical durante una parte del año; (2 T. diabolicus y D. chilense exhibieron el patrón normal de migración, y B. longirostris presentó tanto el patrón normal como el inverso; (3 para todas las especies y en la mayoría de las fechas, el zooplancton presentó reducciones significativas en su exposición al oxígeno como consecuencia de la migración descendente. Los costos térmicos son menos importantes pero existentes en T

  11. Lewis Acids as Activators in CBS-Catalysed Diels-Alder Reactions: Distortion Induced Lewis Acidity Enhancement of SnCl4.

    Science.gov (United States)

    Nödling, Alexander R; Möckel, Robert; Tonner, Ralf; Hilt, Gerhard

    2016-09-05

    The effect of several Lewis acids on the CBS catalyst (named after Corey, Bakshi and Shibata) was investigated in this study. While (2) H NMR spectroscopic measurements served as gauge for the activation capability of the Lewis acids, in situ FT-IR spectroscopy was employed to assess the catalytic activity of the Lewis acid oxazaborolidine complexes. A correlation was found between the Δδ((2) H) values and rate constants kDA , which indicates a direct translation of Lewis acidity into reactivity of the Lewis acid-CBS complexes. Unexpectedly, a significant deviation was found for SnCl4 as Lewis acid. The SnCl4 -CBS adduct was much more reactive than the Δδ((2) H) values predicted and gave similar reaction rates to those observed for the prominent AlBr3 -CBS adduct. To rationalize these results, quantum mechanical calculations were performed. The frontier molecular orbital approach was applied and a good correlation between the LUMO energies of the Lewis acid-CBS-naphthoquinone adducts and kDA could be found. For the SnCl4 -CBS-naphthoquinone adduct an unusual distortion was observed leading to an enhanced Lewis acidity. Energy decomposition analysis with natural orbitals for chemical valence (EDA-NOCV) calculations revealed the relevant interactions and activation mode of SnCl4 as Lewis acid in Diels-Alder reactions. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Activation-strain analysis reveals unexpected origin of fast reactivity in heteroaromatic azadiene inverse-electron-demand diels-alder cycloadditions.

    Science.gov (United States)

    Talbot, Austin; Devarajan, Deepa; Gustafson, Samantha J; Fernández, Israel; Bickelhaupt, F Matthias; Ess, Daniel H

    2015-01-02

    Heteroaromatic azadienes, especially 1,2,4,5-tetrazines, are extremely reactive partners with alkenes in inverse-electron-demand Diels-Alder reactions. Azadiene cycloaddition reactions are used to construct heterocycles in synthesis and are popular as bioorthogonal reactions. The origin of fast azadiene cycloaddition reactivity is classically attributed to the inverse frontier molecular orbital (FMO) interaction between the azadiene LUMO and alkene HOMO. Here, we use a combination of ab initio, density functional theory, and activation-strain model calculations to analyze physical interactions in heteroaromatic azadiene-alkene cycloaddition transition states. We find that FMO interactions do not control reactivity because, while the inverse FMO interaction becomes more stabilizing, there is a decrease in the forward FMO interaction that is offsetting. Rather, fast cycloadditions are due to a decrease in closed-shell Pauli repulsion between cycloaddition partners. The kinetic-thermodynamic relationship found for these inverse-electron-demand cycloadditions is also due to the trend in closed-shell repulsion in the cycloadducts. Cycloaddition regioselectivity, however, is the result of differences in occupied-unoccupied orbital interactions due to orbital overlap. These results provide a new predictive model and correct physical basis for heteroaromatic azadiene reactivity and regioselectivity with alkene dieneophiles.

  13. Intrinsic Patterns of Human Activity

    Science.gov (United States)

    Hu, Kun; Ivanov, Plamen Ch.; Chen, Zhi; Hilton, Michael; Stanley, H. Eugene; Shea, Steven

    2003-03-01

    Activity is one of the defining features of life. Control of human activity is complex, being influenced by many factors both extrinsic and intrinsic to the body. The most obvious extrinsic factors that affect activity are the daily schedule of planned events, such as work and recreation, as well as reactions to unforeseen or random events. These extrinsic factors may account for the apparently random fluctuations in human motion observed over short time scales. The most obvious intrinsic factors are the body clocks including the circadian pacemaker that influences our sleep/wake cycle and ultradian oscillators with shorter time scales [2, 3]. These intrinsic rhythms may account for the underlying regularity in average activity level over longer periods of up to 24 h. Here we ask if the known extrinsic and intrinsic factors fully account for all complex features observed in recordings of human activity. To this end, we measure activity over two weeks from forearm motion in subjects undergoing their regular daily routine. Utilizing concepts from statistical physics, we demonstrate that during wakefulness human activity possesses previously unrecognized complex dynamic patterns. These patterns of activity are characterized by robust fractal and nonlinear dynamics including a universal probability distribution and long-range power-law correlations that are stable over a wide range of time scales (from minutes to hours). Surprisingly, we find that these dynamic patterns are unaffected by changes in the average activity level that occur within individual subjects throughout the day and on different days of the week, and between subjects. Moreover, we find that these patterns persist when the same subjects undergo time-isolation laboratory experiments designed to account for the phase of the circadian pacemaker, and control the known extrinsic factors by restricting behaviors and manipulating scheduled events including the sleep/wake cycle. We attribute these newly

  14. Effect of Amino Acid Residue and Oligosaccharide Chain Chemical Modifications on Spectral and Hemagglutinating Activity of Millettia dielsiana Harms. ex Diels. Lectin

    Institute of Scientific and Technical Information of China (English)

    Shun GAO; Jie AN; Chuan-Fang WU; Ying GU; Fang CHEN; Yuan YU; Qia-Qing WU; Jin-Ku BAO

    2005-01-01

    The effects of modifying the carbohydrate chain and amino acids on the conformation and activity of Millettia dielsiana Harms. ex Diels. lectin (MDL) were studied by hemagglutination, fluorescence and circular dichroism analysis. The modification of tryptophan residues led to a compete loss of hemagglutinating activity; however, the addition of mannose was able to prevent this loss of activity. The results indicate that two tryptophan residues are involved in the carbohydrate-binding site. Modifications of the carboxyl group residues produced an 80% loss of activity, but the presence of mannose protected against the modification. The results suggest that the carboxyl groups of aspartic and glutamic acids are involved in the carbohydrate-binding site of the lectin. However, oxidation of the carbohydrate chain and modification of the histidine and arginine residues did not affect the hemagglutinating activity of MDL. Fluorescence studies of MDL indicate that tryptophan residues are present in a relatively hydrophobic region, and the binding of mannose to MDL could quench tryptophan fluorescence without any change in λmax. The circular dichroism spectrum showed that all of these modifications affected the conformation of the MDL molecule to different extents, except the modification of arginine residues. Fluorescence quenching showed that acrylamide and iodoacetic acids are able to quench 77% and 98% of the fluorescence of tryptophan in MDL, respectively.However, KI produced a barely perceptible effect on the fluorescence of MDL, even when the concentration of I- was 0.15 M. This demonstrates that most of tryptophan residues are located in relatively hydrophobic or negatively charged areas near the surface of the MDL molecule.

  15. Diel changes in metal concentrations in a geogenically acidic river: Rio Agrio, Argentina

    Science.gov (United States)

    Parker, Stephen R.; Gammons, Christopher H.; Pedrozo, Fernando L.; Wood, Scott A.

    2008-12-01

    Rio Agrio in Patagonia, Argentina is a geogenically acidic stream that derives its low-pH waters from condensation of acidic gases near its headwaters on the flanks of the active Copahue Volcano. This study reports the results of three diel (24-h) water samplings in three different pH regimes (3.2, 4.4 and 6.3) along the river. Changes in the concentration and speciation of Fe dominated the diel chemical changes at all three sites, although the timing and intensity of these cycles were different in each reach. At the two acidic sampling sites, total dissolved Fe and dissolved Fe(III) concentrations decreased during the day and increased at night, whereas dissolved Fe(II) showed the reverse pattern. These cycles are explained by Fe(III) photoreduction, as well as enhanced rates of precipitation of hydrous ferric oxide (HFO) during the warm afternoon hours. A strong correlation was observed between Fe(III) and As at the furthest upstream (pH 3.2) site, most likely due to co-precipitation of As with HFO. At the downstream (pH 6.3) location, Fe(II) concentrations increased at night, as did concentrations of rare earth elements and dissolved Al. Photoreduction does not appear to be an important process at pH 6.3, although it may be indirectly responsible for the observed diel cycle of Fe(II) due to advection of photochemically produced Fe(II) from acidic upstream waters. The results of this study of a naturally-acidic river are very similar to diel trends recently obtained from mining-impacted streams receiving acid rock drainage. The results are also used to explore the link between geochemistry and microbiology in acidic eco-systems. For example, Fe(III) photoreduction produces chemical potential energy (in the form of metastable Fe 2+) that helps support the bacterial community in this unique extreme environment.

  16. Diel variation in fig volatiles across syconium development: making sense of scents.

    Science.gov (United States)

    Borges, Renee M; Bessière, Jean-Marie; Ranganathan, Yuvaraj

    2013-05-01

    Plants produce volatile organic compounds (VOCs) in a variety of contexts that include response to abiotic and biotic stresses, attraction of pollinators and parasitoids, and repulsion of herbivores. Some of these VOCs may also exhibit diel variation in emission. In Ficus racemosa, we examined variation in VOCs released by fig syconia throughout syconium development and between day and night. Syconia are globular enclosed inflorescences that serve as developing nurseries for pollinating and parasitic fig wasps. Syconia are attacked by gallers early in their development, serviced by pollinators in mid phase, and are attractive to parasitoids in response to the development of gallers at later stages. VOC bouquets of the different development phases of the syconium were distinctive, as were their day and night VOC profiles. VOCs such as α-muurolene were characteristic of the pollen-receptive diurnal phase, and may serve to attract the diurnally-active pollinating wasps. Diel patterns of release of volatiles could not be correlated with their predicted volatility as determined by Henry's law constants at ambient temperatures. Therefore, factors other than Henry's law constant such as stomatal conductance or VOC synthesis must explain diel variation in VOC emission. A novel use of weighted gene co-expression network analysis (WGCNA) on the volatilome resulted in seven distinct modules of co-emitted VOCs that could be interpreted on the basis of syconium ecology. Some modules were characterized by the response of fig syconia to early galling by parasitic wasps and consisted largely of green leaf volatiles (GLVs). Other modules, that could be characterized by a combination of syconia response to oviposition and tissue feeding by larvae of herbivorous galler pollinators as well as of parasitized wasps, consisted largely of putative herbivore-induced plant volatiles (HIPVs). We demonstrated the usefulness of WGCNA analysis of the volatilome in making sense of the scents

  17. The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated ecotypes in the Mushroom Spring microbial mat

    Directory of Open Access Journals (Sweden)

    Millie T. Olsen

    2015-06-01

    Full Text Available Genomes were obtained for three closely related strains of Synechococcus that are representative of putative ecotypes that predominate at different depths in the 1 mm-thick, upper-green layer in the 60°C mat of Mushroom Spring, Yellowstone National Park, and exhibit different light adaptation and acclimation responses. The genomes were compared to the published genome of a previously obtained, closely related strain from a neighboring spring, and differences in both gene content and orthologous gene alleles between high-light-adapted and low-light-adapted strains were identified. Evidence of genetic differences that relate to adaptation to light intensity and/or quality, CO2 uptake, nitrogen metabolism, organic carbon metabolism, and uptake of other nutrients were found between strains of the different putative ecotypes. In situ diel transcription patterns of genes, including genes unique to either low-light-adapted or high-light-adapted strains and different alleles of an orthologous photosystem gene, revealed that expression is fine-tuned to the different light environments experienced by ecotypes prevalent at various depths in the mat. This study suggests that strains of closely related putative ecotypes have different genomic adaptations that enable them to inhabit distinct ecological niches while living in close proximity within a microbial community.

  18. Atividade nictimeral e tempo de digestão de Aegla longirostri (Crustacea, Decapoda, Anomura Diel activity and digestion time of Aegla longirostri (Crustacea, Decapoda, Anomura

    Directory of Open Access Journals (Sweden)

    Carolina C. Sokolowicz

    Full Text Available O objetivo do presente trabalho foi caracterizar o ritmo de atividade e tempo de digestão em Aegla longirostri Bond-Buckup & Buckup, 1994. Os animais foram coletados em Santa Maria, RS, Brasil. Em laboratório, os animais foram transferidos para aquários individuais (5L. Para testar a atividade locomotora e alimentar dos aeglídeos um grupo de animais permaneceu sob luminosidade constante durante 12 horas, enquanto outro grupo permanecia no escuro, essa condição sendo invertida a cada 12 horas. As observações foram realizadas a cada 6 horas. Para determinar o tempo de digestão os animais foram alimentados e a cada 30 minutos um indivíduo era sacrificado. Aegla longirostri mostrou menor atividade em períodos de luminosidade, o que aconteceu nos dois grupos de animais. Essa espécie leva aproximadamente 5 horas para concluir a digestão extracelular. Os resultados sugerem que A. longirostri possui hábitos noturnos e provavelmente se alimenta sempre que há recursos disponíveis.The aim of this work was to characterize the diel activity rhythm and time of digestion in Aegla longirostri Bond-Buckup & Buckup, 1994. The individuals were collected in Santa Maria, RS, Brazil. In laboratory, the animals were kept in individuals glass aquariums (5L. To test locomotor and feeding activity of the aeglids, a group remained under constant luminosity for 12 hours, while another group was mantained in the dark, this condition being reversed at each 12 hours. The observations were taken at every 6 hours. For the determination of digestion's time the animals were fed, and one individual was sacrificed at each 30 minutes. Aegla longirostri showed lower activity in periods of light time. This condition was recorded for both groups of animals. This species takes approximately 5 hours to conclude its extracellular digestion. The results suggest that A. longirostri has nocturnal habits and probably feeds whenever resources are available.

  19. Diel changes in plasma melatonin and corticosterone concentrations in tropical Nazca boobies (Sula granti) in relation to moon phase and age.

    Science.gov (United States)

    Tarlow, Elisa M; Hau, Michaela; Anderson, David J; Wikelski, Martin

    2003-10-01

    We investigated the effects of moon phases and age on diel rhythms of plasma melatonin and corticosterone in free-living Nazca boobies (Sula granti) on the Galápagos Islands, Ecuador. Melatonin and corticosterone secretion are regulated by the circadian system and the two hormones play a role in the control of locomotor activity and foraging, which can be influenced by moon phases. These seabirds have a long life span and in many vertebrates circadian function deteriorates with age. The functioning of the circadian system under different environmental conditions and changes related to age are poorly understood and hardly studied in wild birds. Nazca boobies had generally low plasma melatonin concentrations but showed a diel variation with higher concentrations at 00:00 and 16:00h. The diel variations in melatonin concentrations disappeared during full moon, suggesting that natural light levels at night can suppress melatonin secretion in Nazca boobies. Maximal melatonin concentrations tended to decline in older birds (10-19 years). Birds showed a clear diel variation in basal plasma corticosterone with a peak in the early morning, before the active period begins, and low concentrations throughout the day. As with melatonin, there were no diel variations in corticosterone at full moon, which may be due to different activity patterns in response to food availability or changes in the circadian system. While other studies have found a relationship between corticosterone and melatonin, we found no such correlation in Nazca boobies. The lunar cycle appears to affect the hormone titers of Nazca boobies both directly and indirectly. First, melatonin rhythms can be directly affected by the light intensity associated with full moon. Second, prey availability may change foraging patterns and can therefore indirectly alter corticosterone secretion in Nazca boobies.

  20. Covalently crosslinked diels-alder polymer networks.

    Energy Technology Data Exchange (ETDEWEB)

    Bowman, Christopher (University of Colorado, Boulder, CO); Adzima, Brian J. (University of Colorado, Boulder, CO); Anderson, Benjamin John

    2011-09-01

    This project examines the utility of cycloaddition reactions for the synthesis of polymer networks. Cycloaddition reactions are desirable because they produce no unwanted side reactions or small molecules, allowing for the formation of high molecular weight species and glassy crosslinked networks. Both the Diels-Alder reaction and the copper-catalyzed azide-alkyne cycloaddition (CuAAC) were studied. Accomplishments include externally triggered healing of a thermoreversible covalent network via self-limited hysteresis heating, the creation of Diels-Alder based photoresists, and the successful photochemical catalysis of CuAAC as an alternative to the use of ascorbic acid for the generation of Cu(I) in click reactions. An analysis of the results reveals that these new methods offer the promise of efficiently creating robust, high molecular weight species and delicate three dimensional structures that incorporate chemical functionality in the patterned material. This work was performed under a Strategic Partnerships LDRD during FY10 and FY11 as part of a Sandia National Laboratories/University of Colorado-Boulder Excellence in Science and Engineering Fellowship awarded to Brian J. Adzima, a graduate student at UC-Boulder. Benjamin J. Anderson (Org. 1833) was the Sandia National Laboratories point-of-contact for this fellowship.

  1. Nitrogen fixation in Clear Lake, California. 4. Diel studies on Aphanizomenon and Anabaena blooms

    Energy Technology Data Exchange (ETDEWEB)

    Horne, A.J.

    1979-01-01

    Day and night measurements of N/sub 2/ fixation (as acetylene reduction) were made during spring blooms of Aphanizomenon flos-aquae and two autumn blooms of Anabaena spp. From 9 to 23% of the 24-h fixation occurred between 1100 and 1300 hours. Nitrogen fixation in spring showed complex, physically shallow but optically deep and mobile subsurface peaks of nitrogenase activity, which were totally unrelated to Aphanizomenon biomass but may have been due to diel changes in light penetrating the relatively clear water. Nocturnal fixation was uniformly distributed with depth and accounted for 1/5 to 1/3 of daylight fixation. In more turbid autumn waters, the pattern of N/sub 2/ fixation for Anabaena blooms was simpler, with a surface (or near-surface) peak decreasing with depth. Nocturnal fixation was more uniformly distributed with depth. The difference in fixation patterns between the two species is attributable to the interactions of oxygen with the nitrogenase enzyme system. The diel changes in nitrogenase activity suggest a need to establish whether the precursors of nitrogenase accumulate in an oxygen-stable form.

  2. Circadian clock gene expression in the coral Favia fragum over diel and lunar reproductive cycles.

    Science.gov (United States)

    Hoadley, Kenneth D; Szmant, Alina M; Pyott, Sonja J

    2011-05-06

    Natural light cycles synchronize behavioral and physiological cycles over varying time periods in both plants and animals. Many scleractinian corals exhibit diel cycles of polyp expansion and contraction entrained by diel sunlight patterns, and monthly cycles of spawning or planulation that correspond to lunar moonlight cycles. The molecular mechanisms for regulating such cycles are poorly understood. In this study, we identified four molecular clock genes (cry1, cry2, clock and cycle) in the scleractinian coral, Favia fragum, and investigated patterns of gene expression hypothesized to be involved in the corals' diel polyp behavior and lunar reproductive cycles. Using quantitative PCR, we measured fluctuations in expression of these clock genes over both diel and monthly spawning timeframes. Additionally, we assayed gene expression and polyp expansion-contraction behavior in experimental corals in normal light:dark (control) or constant dark treatments. Well-defined and reproducible diel patterns in cry1, cry2, and clock expression were observed in both field-collected and the experimental colonies maintained under control light:dark conditions, but no pattern was observed for cycle. Colonies in the control light:dark treatment also displayed diel rhythms of tentacle expansion and contraction. Experimental colonies in the constant dark treatment lost diel patterns in cry1, cry2, and clock expression and displayed a diminished and less synchronous pattern of tentacle expansion and contraction. We observed no pattern in cry1, cry2, clock, or cycle expression correlated with monthly spawning events suggesting these genes are not involved in the entrainment of reproductive cycles to lunar light cycles in F. fragum. Our results suggest a molecular clock mechanism, potentially similar to that in described in fruit flies, exists within F. fragum.

  3. Diel patterns of water potential components for the crassulacean acid metabolism plant Opuntia ficus-indica when well-watered or droughted

    Energy Technology Data Exchange (ETDEWEB)

    Goldstein, G.; Ortega, J.K.E.; Nerd, A.; Nobel, P.S. (Univ. of California, Los Angeles (United States))

    1991-01-01

    Under well-watered conditions, chlorenchyma acidity in cladodes of Opuntia ficus-indica increased substantially at night, fully accounting for the 0.26-megapascal nocturnal increase in osmotic pressure in the outer 2 millimeters. Osmotic pressure in the inner part of the chlorenchyma and in the water-storage parenchyma did not change significantly over 24-hour periods. Three months of drought decreased nocturnal acid accumulation by 73% and essentially abolished transpiration; also, 27% of the chlorenchyma water and 61% of the parenchyma water was lost during such drought, but the average tissue osmotic pressure was little affected. Turgor pressure was maintained in the chlorenchyma after 3 months of drought, although it decreased sevenfold in the water-storage parenchyma compared with the well-watered condition. Moreover, the nocturnal increases in turgor pressure of about 0.08 megapascal in the outer part of the chlorenchyma was also unchanged by such drought. The water potential magnitudes favored water movement from the parenchyma to the chlorenchyma at the end of the night and in the reverse direction during the late afternoon. Experiments with tritiated water support this pattern of water movement, which is also in agreement with predictions based on electric-circuit analog models for Crassulacean acid metabolism plants.

  4. Diel Patterns of Water Potential Components for the Crassulacean Acid Metabolism Plant Opuntia ficus-indica when Well-Watered or Droughted 1

    Science.gov (United States)

    Goldstein, Guillermo; Ortega, Joseph K. E.; Nerd, Avinoam; Nobel, Park S.

    1991-01-01

    Under well-watered conditions, chlorenchyma acidity in cladodes of Opuntia ficus-indica increased substantially at night, fully accounting for the 0.26-megapascal nocturnal increase in osmotic pressure in the outer 2 millimeters. Osmotic pressure in the inner part of the chlorenchyma and in the water-storage parenchyma did not change significantly over 24-hour periods. Three months of drought decreased nocturnal acid accumulation by 73% and essentially abolished transpiration; also, 27% of the chlorenchyma water and 61% of the parenchyma water was lost during such drought, but the average tissue osmotic pressure was little affected. Turgor pressure was maintained in the chlorenchyma after 3 months of drought, although it decreased sevenfold in the water-storage parenchyma compared with the well-watered condition. Moreover, the nocturnal increases in turgor pressure of about 0.08 megapascal in the outer part of the chlorenchyma was also unchanged by such drought. The water potential magnitudes favored water movement from the parenchyma to the chlorenchyma at the end of the night and in the reverse direction during the late afternoon. Experiments with tritiated water support this pattern of water movement, which is also in agreement with predictions based on electric-circuit analog models for Crassulacean acid metabolism plants. PMID:16667964

  5. Pattern activation/recognition theory of mind.

    Science.gov (United States)

    du Castel, Bertrand

    2015-01-01

    In his 2012 book How to Create a Mind, Ray Kurzweil defines a "Pattern Recognition Theory of Mind" that states that the brain uses millions of pattern recognizers, plus modules to check, organize, and augment them. In this article, I further the theory to go beyond pattern recognition and include also pattern activation, thus encompassing both sensory and motor functions. In addition, I treat checking, organizing, and augmentation as patterns of patterns instead of separate modules, therefore handling them the same as patterns in general. Henceforth I put forward a unified theory I call "Pattern Activation/Recognition Theory of Mind." While the original theory was based on hierarchical hidden Markov models, this evolution is based on their precursor: stochastic grammars. I demonstrate that a class of self-describing stochastic grammars allows for unifying pattern activation, recognition, organization, consistency checking, metaphor, and learning, into a single theory that expresses patterns throughout. I have implemented the model as a probabilistic programming language specialized in activation/recognition grammatical and neural operations. I use this prototype to compute and present diagrams for each stochastic grammar and corresponding neural circuit. I then discuss the theory as it relates to artificial network developments, common coding, neural reuse, and unity of mind, concluding by proposing potential paths to validation.

  6. Pattern Activation/Recognition Theory of Mind

    Directory of Open Access Journals (Sweden)

    Bertrand edu Castel

    2015-07-01

    Full Text Available In his 2012 book How to Create a Mind, Ray Kurzweil defines a Pattern Recognition Theory of Mind that states that the brain uses millions of pattern recognizers, plus modules to check, organize, and augment them. In this article, I further the theory to go beyond pattern recognition and include also pattern activation, thus encompassing both sensory and motor functions. In addition, I treat checking, organizing, and augmentation as patterns of patterns instead of separate modules, therefore handling them the same as patterns in general. Henceforth I put forward a unified theory I call Pattern Activation/Recognition Theory of Mind. While the original theory was based on hierarchical hidden Markov models, this evolution is based on their precursor: stochastic grammars. I demonstrate that a class of self-describing stochastic grammars allows for unifying pattern activation, recognition, organization, consistency checking, metaphor, and learning, into a single theory that expresses patterns throughout. I have implemented the model as a probabilistic programming language specialized in activation/recognition grammatical and neural operations. I use this prototype to compute and present diagrams for each stochastic grammar and corresponding neural circuit. I then discuss the theory as it relates to artificial network developments, common coding, neural reuse, and unity of mind, concluding by proposing potential paths to validation.

  7. Pattern Formation on Networks: from Localised Activity to Turing Patterns

    Science.gov (United States)

    McCullen, Nick; Wagenknecht, Thomas

    2016-06-01

    Networks of interactions between competing species are used to model many complex systems, such as in genetics, evolutionary biology or sociology and knowledge of the patterns of activity they can exhibit is important for understanding their behaviour. The emergence of patterns on complex networks with reaction-diffusion dynamics is studied here, where node dynamics interact via diffusion via the network edges. Through the application of a generalisation of dynamical systems analysis this work reveals a fundamental connection between small-scale modes of activity on networks and localised pattern formation seen throughout science, such as solitons, breathers and localised buckling. The connection between solutions with a single and small numbers of activated nodes and the fully developed system-scale patterns are investigated computationally using numerical continuation methods. These techniques are also used to help reveal a much larger portion of of the full number of solutions that exist in the system at different parameter values. The importance of network structure is also highlighted, with a key role being played by nodes with a certain so-called optimal degree, on which the interaction between the reaction kinetics and the network structure organise the behaviour of the system.

  8. Physical Activity and Pattern of Blood Pressure

    African Journals Online (AJOL)

    GB

    2014-04-02

    Apr 2, 2014 ... This study investigated physical activity (PA) and pattern of blood pressure (BP) in ..... determinants of high blood pressure in a group of urban Nigerians. J. Hum. ... Endurance exercise effects on quality of life and menopausal ...

  9. Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat.

    Science.gov (United States)

    Steunou, Anne-Soisig; Jensen, Sheila I; Brecht, Eric; Becraft, Eric D; Bateson, Mary M; Kilian, Oliver; Bhaya, Devaki; Ward, David M; Peters, John W; Grossman, Arthur R; Kühl, Michael

    2008-04-01

    Nitrogen fixation, a prokaryotic, O2-inhibited process that reduces N2 gas to biomass, is of paramount importance in biogeochemical cycling of nitrogen. We analyzed the levels of nif transcripts of Synechococcus ecotypes, NifH subunit and nitrogenase activity over the diel cycle in the microbial mat of an alkaline hot spring in Yellowstone National Park. The results showed a rise in nif transcripts in the evening, with a subsequent decline over the course of the night. In contrast, immunological data demonstrated that the level of the NifH polypeptide remained stable during the night, and only declined when the mat became oxic in the morning. Nitrogenase activity was low throughout the night; however, it exhibited two peaks, a small one in the evening and a large one in the early morning, when light began to stimulate cyanobacterial photosynthetic activity, but O2 consumption by respiration still exceeded the rate of O2 evolution. Once the irradiance increased to the point at which the mat became oxic, the nitrogenase activity was strongly inhibited. Transcripts for proteins associated with energy-producing metabolisms in the cell also followed diel patterns, with fermentation-related transcripts accumulating at night, photosynthesis- and respiration-related transcripts accumulating during the day and late afternoon, respectively. These results are discussed with respect to the energetics and regulation of N2 fixation in hot spring mats and factors that can markedly influence the extent of N2 fixation over the diel cycle.

  10. DIEL RHYTHM OF REPRODUCTIVE ACTIVITY AND ITS TEMPORAL CORRELATION WITH RELEASE OF MALE-SPECIFIC SEX PHEROMONES IN THE WHITE SPOTTED SPINED BUG EYSARCORIS PARVUS (HETEROPTERA: PENTATOMIDAE)%尖角二星蝽(半翅目:蝽科)生殖行为的昼夜节律及其释放雄性性信息素间的关系

    Institute of Scientific and Technical Information of China (English)

    门宏超; Tetsuo Ya-bu; Walter S.Leal

    2001-01-01

    compounds were released at similar diel rhythm to the start of copulation and peak patterns of the two major components were also similar to that of start of copulation. Temporal correlation between the diel rhythm of pheromone candidate release and start of copulation or walking activity was found. On the other hand, most copulation terminated within the first half of photophase and insects were inactive during the dark period and the former half of photophase. Courtship behavior and its relation to the male-specific sex pheromone compoumds were discussed.

  11. Animal-borne imaging reveals novel insights into the foraging behaviors and Diel activity of a large-bodied apex predator, the American alligator (Alligator mississippiensis.

    Directory of Open Access Journals (Sweden)

    James C Nifong

    Full Text Available Large-bodied, top- and apex predators (e.g., crocodilians, sharks, wolves, killer whales can exert strong top-down effects within ecological communities through their interactions with prey. Due to inherent difficulties while studying the behavior of these often dangerous predatory species, relatively little is known regarding their feeding behaviors and activity patterns, information that is essential to understanding their role in regulating food web dynamics and ecological processes. Here we use animal-borne imaging systems (Crittercam to study the foraging behavior and activity patterns of a cryptic, large-bodied predator, the American alligator (Alligator mississippiensis in two estuaries of coastal Florida, USA. Using retrieved video data we examine the variation in foraging behaviors and activity patterns due to abiotic factors. We found the frequency of prey-attacks (mean = 0.49 prey attacks/hour as well as the probability of prey-capture success (mean = 0.52 per attack were significantly affected by time of day. Alligators attempted to capture prey most frequently during the night. Probability of prey-capture success per attack was highest during morning hours and sequentially lower during day, night, and sunset, respectively. Position in the water column also significantly affected prey-capture success, as individuals' experienced two-fold greater success when attacking prey while submerged. These estimates are the first for wild adult American alligators and one of the few examples for any crocodilian species worldwide. More broadly, these results reveal that our understandings of crocodilian foraging behaviors are biased due to previous studies containing limited observations of cryptic and nocturnal foraging interactions. Our results can be used to inform greater understanding regarding the top-down effects of American alligators in estuarine food webs. Additionally, our results highlight the importance and power of using animal

  12. Animal-Borne Imaging Reveals Novel Insights into the Foraging Behaviors and Diel Activity of a Large-Bodied Apex Predator, the American Alligator (Alligator mississippiensis)

    Science.gov (United States)

    Nifong, James C.; Nifong, Rachel L.; Silliman, Brian R.; Lowers, Russell H.; Guillette, Louis J.; Ferguson, Jake M.; Welsh, Matthew; Abernathy, Kyler; Marshall, Greg

    2014-01-01

    Large-bodied, top- and apex predators (e.g., crocodilians, sharks, wolves, killer whales) can exert strong top-down effects within ecological communities through their interactions with prey. Due to inherent difficulties while studying the behavior of these often dangerous predatory species, relatively little is known regarding their feeding behaviors and activity patterns, information that is essential to understanding their role in regulating food web dynamics and ecological processes. Here we use animal-borne imaging systems (Crittercam) to study the foraging behavior and activity patterns of a cryptic, large-bodied predator, the American alligator (Alligator mississippiensis) in two estuaries of coastal Florida, USA. Using retrieved video data we examine the variation in foraging behaviors and activity patterns due to abiotic factors. We found the frequency of prey-attacks (mean = 0.49 prey attacks/hour) as well as the probability of prey-capture success (mean = 0.52 per attack) were significantly affected by time of day. Alligators attempted to capture prey most frequently during the night. Probability of prey-capture success per attack was highest during morning hours and sequentially lower during day, night, and sunset, respectively. Position in the water column also significantly affected prey-capture success, as individuals’ experienced two-fold greater success when attacking prey while submerged. These estimates are the first for wild adult American alligators and one of the few examples for any crocodilian species worldwide. More broadly, these results reveal that our understandings of crocodilian foraging behaviors are biased due to previous studies containing limited observations of cryptic and nocturnal foraging interactions. Our results can be used to inform greater understanding regarding the top-down effects of American alligators in estuarine food webs. Additionally, our results highlight the importance and power of using animal

  13. Patterns of thermal constraint on ectotherm activity.

    Science.gov (United States)

    Gunderson, Alex R; Leal, Manuel

    2015-05-01

    Thermal activity constraints play a major role in many aspects of ectotherm ecology, including vulnerability to climate change. Therefore, there is strong interest in developing general models of the temperature dependence of activity. Several models have been put forth (explicitly or implicitly) to describe such constraints; nonetheless, tests of the predictive abilities of these models are lacking. In addition, most models consider activity as a threshold trait instead of considering continuous changes in the vigor of activity among individuals. Using field data for a tropical lizard (Anolis cristatellus) and simulations parameterized by our observations, we determine how well various threshold and continuous-activity models match observed activity patterns. No models accurately predicted activity under all of the thermal conditions that we considered. In addition, simulations showed that the performance of threshold models decreased as temperatures increased, which is a troubling finding given the threat of global climate change. We also find that activity rates are more sensitive to temperature than are the physiological traits often used as a proxy for fitness. We present a model of thermal constraint on activity that integrates aspects of both the threshold model and the continuous-activity model, the general features of which are supported by activity data from other species. Overall, our results demonstrate that greater attention should be given to fine-scale patterns of thermal constraint on activity.

  14. Relationships between hippocampal activity and breathing patterns

    DEFF Research Database (Denmark)

    Harper, R M; Poe, G R; Rector, D M;

    1998-01-01

    Single cell discharge, EEG activity, and optical changes accompanying alterations in breathing patterns, as well as the knowledge that respiratory musculature is heavily involved in movement and other behavioral acts, implicate hippocampal regions in some aspects of breathing control. The control...

  15. Contrasting diel hysteresis between soil autotrophic and heterotrophic respiration in a desert ecosystem under different rainfall scenarios.

    Science.gov (United States)

    Song, Weimin; Chen, Shiping; Zhou, Yadan; Wu, Bo; Zhu, Yajuan; Lu, Qi; Lin, Guanghui

    2015-11-30

    Diel hysteresis occurs often between soil CO2 efflux (R(S)) and temperature, yet, little is known if diel hysteresis occurs in the two components of R(S), i.e., autotrophic respiration (R(A)) and heterotrophic respiration (R(H)), and how diel hysteresis will respond to future rainfall change. We conducted a field experiment in a desert ecosystem in northern China simulating five different scenarios of future rain regimes. Diel variations of soil CO2 efflux and soil temperature were measured on Day 6 and Day 16 following the rain addition treatments each month during the growing season. We found contrasting responses in the diel hysteresis of R(A) and R(H) to soil temperature, with a clockwise hysteresis loop for R(H) but a counter-clockwise hysteresis loop for R(A). Rain addition significantly increased the magnitude of diel hysteresis for both R(H) and R(A) on Day 6, but had no influence on either on Day 16 when soil moisture was much lower. These findings underline the different roles of biological (i.e. plant and microbial activities) and physical-chemical (e.g. heat transport and inorganic CO2 exchange) processes in regulating the diel hysteresis of R(A) and R(H), which should be considered when estimating soil CO2 efflux in desert regions under future rainfall regime.

  16. Diel vertical migration and spatial overlap between fish larvae and zooplankton in two tropical lakes, Brazil.

    Science.gov (United States)

    Picapedra, P H S; Lansac-Tôha, F A; Bialetzki, A

    2015-05-01

    The effect of fish larvae on the diel vertical migration of the zooplankton community was investigated in two tropical lakes, Finado Raimundo and Pintado lakes, Mato Grosso do Sul State, Brazil. Nocturnal and diurnal samplings were conducted in the limnetic region of each lake for 10 consecutive months from April 2008 to January 2009. The zooplankton community presented a wide range of responses to the predation pressure exerted by fish larvae in both environments, while fish larvae showed a typical pattern of normal diel vertical migration. Our results also demonstrated that the diel vertical migration is an important behaviour to avoid predation, since it reduces the spatial overlap between prey and potential predator, thus supporting the hypothesis that vertical migration is a defence mechanism against predation.

  17. Universal activity pattern in human interactive dynamics

    CERN Document Server

    Formentin, Marco; Maritan, Amos; Zanzotto, Giovanni

    2014-01-01

    We investigate the response function of human agents as demonstrated by written correspondence, uncovering a new universal pattern for how the reactive dynamics of individuals is distributed across the set of each agent's contacts. In long-term empirical data on email, we find that the set of response times considered separately for the messages to each different correspondent of a given writer, generate a family of heavy-tailed distributions, which have largely the same features for all agents, and whose characteristic times grow exponentially with the rank of each correspondent. We show this universal behavioral pattern emerges robustly by considering weighted moving averages of the priority-conditioned response-time probabilities generated by a basic prioritization model. Our findings clarify how the range of priorities in the inputs from one's environment underpin and shape the dynamics of agents embedded in a net of reactive relations. These newly revealed activity patterns constrain future models of com...

  18. Sow-activity classification from acceleration patterns

    DEFF Research Database (Denmark)

    Escalante, Hugo Jair; Rodriguez, Sara V.; Cordero, Jorge

    2013-01-01

    This paper describes a supervised learning approach to sow-activity classification from accelerometer measurements. In the proposed methodology, pairs of accelerometer measurements and activity types are considered as labeled instances of a usual supervised classification task. Under this scenario...... sow-activity classification can be approached with standard machine learning methods for pattern classification. Individual predictions for elements of times series of arbitrary length are combined to classify it as a whole. An extensive comparison of representative learning algorithms, including...... neural networks, support vector machines, and ensemble methods, is presented. Experimental results are reported using a data set for sow-activity classification collected in a real production herd. The data set, which has been widely used in related works, includes measurements from active (Feeding...

  19. Spontaneous Plasticity of Multineuronal Activity Patterns in Activated Hippocampal Networks

    Directory of Open Access Journals (Sweden)

    Atsushi Usami

    2008-01-01

    Full Text Available Using functional multineuron imaging with single-cell resolution, we examined how hippocampal networks by themselves change the spatiotemporal patterns of spontaneous activity during the course of emitting spontaneous activity. When extracellular ionic concentrations were changed to those that mimicked in vivo conditions, spontaneous activity was increased in active cell number and activity frequency. When ionic compositions were restored to the control conditions, the activity level returned to baseline, but the weighted spatial dispersion of active cells, as assessed by entropy-based metrics, did not. Thus, the networks can modify themselves by altering the internal structure of their correlated activity, even though they as a whole maintained the same level of activity in space and time.

  20. Discovering patterns of activity in unstructured incident reports at scale

    Science.gov (United States)

    2015-05-12

    2015 Carnegie Mellon University Software Engineering Institute Carnegie Mellon University Pittsburgh , PA 15213 Discovering patterns of activity...patterns of activity in incident reports • US-CERT receives incident reports from a diverse constituency. • Each ticket is an observation of...patterns of activity in incident reports Indicators across tickets Indicators occur with diverse patterns across tickets, reporters and time. Time on

  1. Diel behavior of adult striped bass using tailwater habitat as summer refuge

    Science.gov (United States)

    Young, S.P.; Isely, J.J.

    2007-01-01

    General patterns of summer diel distribution and movement were identified for adult striped bass Morone saxatilis using tailwater habitat influenced by the diel operation cycle of a hydroelectric dam during the summers of 2003 and 2004. Striped bass distribution within the tailwater was similar during each diel-tracking event and across both summers. The majority of fish remained within the tailwater the entire summer; however, some made periodic excursions to and from the tailwater throughout the summer. Further, most striped bass were located within 0.5 km of Richard B. Russell Dam during all stages of operation on all occasions - probably because of the constant availability of optimal habitat during all three stages of operation on all diel-tracking events. The diel cycle of dam operation, which included pumped storage during each summer, did not degrade tailwater habitat below optimal conditions, according to summer habitat suitability index values for inland adult striped bass. Movement was significantly higher during hydroelectric generation operations than during no-generation and pumped storage periods in summer 2003; this difference was not apparent during summer 2004. Mean absolute movement peaked during hydroelectric generation on six of eight diel-tracking events. During both summers, movement was directed up-reservoir during no-generation and generation periods and down-reservoir during pumped storage. Mean total daily movement rates ranged from 0.59 to 4.04 km/d and were greater than those previously estimated from bimonthly sampling for this population. Total daily movement rate peaked during the first tracking event each summer and then declined as summer progressed. These findings suggest that hydroelectric discharges affect adult striped bass behavior, but the effects are not adverse as long as habitat is not degraded by hydroelectric facility operations. ?? Copyright by the American Fisheries Society 2007.

  2. Dynamic patterns of academic forum activities

    Science.gov (United States)

    Zhao, Zhi-Dan; Gao, Ya-Chun; Cai, Shi-Min; Zhou, Tao

    2016-11-01

    A mass of traces of human activities show rich dynamic patterns. In this article, we comprehensively investigate the dynamic patterns of 50 thousands of researchers' activities in Sciencenet, the largest multi-disciplinary academic community in China. Through statistical analyses, we found that (i) there exists a power-law scaling between the frequency of visits to an academic forum and the number of corresponding visitors, with the exponent being about 1.33; (ii) the expansion process of academic forums obeys the Heaps' law, namely the number of distinct visited forums to the number of visits grows in a power-law form with exponent being about 0.54; (iii) the probability distributions of time intervals and the number of visits taken to revisit the same academic forum both follow power-laws, indicating the existence of memory effect in academic forum activities. On the basis of these empirical results, we propose a dynamic model that incorporates the exploration, preferential return with memory effect, which can well reproduce the observed scaling laws.

  3. New activity pattern in human interactive dynamics

    Science.gov (United States)

    Formentin, Marco; Lovison, Alberto; Maritan, Amos; Zanzotto, Giovanni

    2015-09-01

    We investigate the response function of human agents as demonstrated by written correspondence, uncovering a new pattern for how the reactive dynamics of individuals is distributed across the set of each agent’s contacts. In long-term empirical data on email, we find that the set of response times considered separately for the messages to each different correspondent of a given writer, generate a family of heavy-tailed distributions, which have largely the same features for all agents, and whose characteristic times grow exponentially with the rank of each correspondent. We furthermore show that this new behavioral pattern emerges robustly by considering weighted moving averages of the priority-conditioned response-time probabilities generated by a basic prioritization model. Our findings clarify how the range of priorities in the inputs from one’s environment underpin and shape the dynamics of agents embedded in a net of reactive relations. These newly revealed activity patterns might be universal, being present in other general interactive environments, and constrain future models of communication and interaction networks, affecting their architecture and evolution.

  4. Daily Weather and Children's Physical Activity Patterns.

    Science.gov (United States)

    Remmers, Teun; Thijs, Carel; Timperio, Anna; Salmon, J O; Veitch, Jenny; Kremers, Stef P J; Ridgers, Nicola D

    2017-05-01

    Understanding how the weather affects physical activity (PA) may help in the design, analysis, and interpretation of future studies, especially when investigating PA across diverse meteorological settings and with long follow-up periods. The present longitudinal study first aims to examine the influence of daily weather elements on intraindividual PA patterns among primary school children across four seasons, reflecting day-to-day variation within each season. Second, we investigate whether the influence of weather elements differs by day of the week (weekdays vs weekends), gender, age, and body mass index. PA data were collected by ActiGraph accelerometers for 1 wk in each of four school terms that reflect each season in southeast Australia. PA data from 307 children (age range 8.7-12.8 yr) were matched to daily meteorological variables obtained from the Australian Government's Bureau of Meteorology (maximum temperature, relative humidity, solar radiation, day length, and rainfall). Daily PA patterns and their association with weather elements were analyzed using multilevel linear mixed models. Temperature was the strongest predictor of moderate and vigorous PA, followed by solar radiation and humidity. The relation with temperature was curvilinear, showing optimum PA levels at temperatures between 20°C and 22°C. Associations between weather elements on PA did not differ by gender, child's age, or body mass index. This novel study focused on the influence of weather elements on intraindividual PA patterns in children. As weather influences cannot be controlled, knowledge of its effect on individual PA patterns may help in the design of future studies, interpretation of their results, and translation into PA promotion.

  5. Diels-Alder Reactions in Water. Effects of Hydrophobicity and Hydrogen Bonding

    NARCIS (Netherlands)

    Otto, Sijbren; Blokzijl, Wilfried; Engberts, Jan B.F.N.

    1994-01-01

    In order to check whether the activated complex for the Diels-Alder reactions of 5-substituted 1,4-naphthoquinones with cyclopentadiene is more polar in water than in other solvents, we have determined the substituent effects in seven different solvents. The substituent effects gradually decrease wi

  6. Activity patterns and foraging behaviour of Audouin' s gulls in the Ebro Delta, NW Mediterranean

    Directory of Open Access Journals (Sweden)

    Santi Mañosa

    2004-12-01

    Full Text Available Twenty Audouin´s gulls, Larus audouinii, breeding in the Ebro Delta (NW Mediterranean were radio-tracked in 1998 to study their foraging behaviour and activity patterns. Some detrimental effects of tagging on the breeding success of the birds were detected, especially when both members of the pair were tagged. The results were actually constrained by the low number of locations due to natural breeding failure and failure in tag emission, as well as the adverse effect of tagging. However, through a combination of aircraft surveys at sea and a fixed station for automatic tracking of the presence of the birds at the colony, novel individual-based information of home ranges and activity patterns was obtained. Trawler fishing activity seemed to influence both the foraging range and habitat use: while trawlers operated, gulls overlapped their fishing grounds with vessels, probably to scavenge on discards. Very few locations were obtained during a trawling moratorium period, although they were all recorded in coastal bays and terrestrial habitats. During the trawling activity period, gulls ranged over a minimum convex polygon area of 2900 km2. Gulls were tracked up to 40 km from the colony, but some individuals were observed beyond 150 km while still breeding. Arrivals and departures from the colony were in accordance with the trawling timetable. However, most birds also showed some nocturnal foraging activity, probably linked to active fishing of clupeoids (following diel migrations or to the exploitation of purse-seine fishing activity. Foraging trips lasted on average 15 hours: males performed significantly shorter trips than females, which spent more time outside the colony. The proportion of nocturnal time involved in the foraging trips was the same for males and females, but whilst all males initiated their trips both during the day and at night, some females only initiated their trips during the day. Hatching success was found to be related to

  7. Understanding human activity patterns based on space-time-semantics

    Science.gov (United States)

    Huang, Wei; Li, Songnian

    2016-11-01

    Understanding human activity patterns plays a key role in various applications in an urban environment, such as transportation planning and traffic forecasting, urban planning, public health and safety, and emergency response. Most existing studies in modeling human activity patterns mainly focus on spatiotemporal dimensions, which lacks consideration of underlying semantic context. In fact, what people do and discuss at some places, inferring what is happening at the places, cannot be simple neglected because it is the root of human mobility patterns. We believe that the geo-tagged semantic context, representing what individuals do and discuss at a place and a specific time, drives a formation of specific human activity pattern. In this paper, we aim to model human activity patterns not only based on space and time but also with consideration of associated semantics, and attempt to prove a hypothesis that similar mobility patterns may have different motivations. We develop a spatiotemporal-semantic model to quantitatively express human activity patterns based on topic models, leading to an analysis of space, time and semantics. A case study is conducted using Twitter data in Toronto based on our model. Through computing the similarities between users in terms of spatiotemporal pattern, semantic pattern and spatiotemporal-semantic pattern, we find that only a small number of users (2.72%) have very similar activity patterns, while the majority (87.14%) show different activity patterns (i.e., similar spatiotemporal patterns and different semantic patterns, similar semantic patterns and different spatiotemporal patterns, or different in both). The population of users that has very similar activity patterns is decreased by 56.41% after incorporating semantic information in the corresponding spatiotemporal patterns, which can quantitatively prove the hypothesis.

  8. Physical Activity, Sedentary Behavior, and Dietary Patterns among Children

    OpenAIRE

    Gubbels, Jessica S; van Assema, Patricia; Kremers, Stef P. J.

    2013-01-01

    Energy balance-related behavioral patterns find their origin in early childhood. The current paper provides an overview of studies that have examined such behavioral patterns, i.e., the clustering of dietary behaviors, physical activity, and/or sedentary behavior. The paper discusses the importance of examining energy balance-related behavioral patterns in children, outlines methods to examine these patterns, and provides examples of patterns that have been found (e.g., the universal sedentar...

  9. Passenger transport and household activity patterns

    DEFF Research Database (Denmark)

    Jørgensen, Kaj

    1997-01-01

    Review of Danish passenger transport patterns and analysis of energy consumption, emissions and safety impacts for selected typical households' travelling......Review of Danish passenger transport patterns and analysis of energy consumption, emissions and safety impacts for selected typical households' travelling...

  10. Effects of food type on diel behaviours of common carp Cyprinus carpio in simulated aquaculture pond conditions

    NARCIS (Netherlands)

    Rahman, M.M.; Meyer, C.G.

    2009-01-01

    In order to better understand behaviour patterns of common carp Cyprinus carpio in aquaculture ponds, their diel grazing, swimming, resting and schooling behaviours were observed in six 1 m(2) tanks under simulated pond conditions. Each tank was fertilized to stimulate natural food production before

  11. Air pollution exposure: An activity pattern approach for active transportation

    Science.gov (United States)

    Adams, Matthew D.; Yiannakoulias, Nikolaos; Kanaroglou, Pavlos S.

    2016-09-01

    In this paper, we demonstrate the calculation of personal air pollution exposure during trips made by active transportation using activity patterns without personal monitors. We calculate exposure as the inhaled dose of particulate matter 2.5 μg or smaller. Two modes of active transportation are compared, and they include cycling and walking. Ambient conditions are calculated by combining mobile and stationary monitoring data in an artificial neural network space-time model. The model uses a land use regression framework and has a prediction accuracy of R2 = 0.78. Exposure is calculated at 10 m or shorter intervals during the trips using inhalation rates associated with both modes. The trips are children's routes between home and school. The average dose during morning cycling trips was 2.17 μg, during morning walking trips was 3.19 μg, during afternoon cycling trips was 2.19 μg and during afternoon walking trips was 3.23 μg. The cycling trip dose was significantly lower than the walking trip dose. The air pollution exposure during walking or cycling trips could not be strongly predicted by either the school or household ambient conditions, either individually or in combination. Multiple linear regression models regressing both the household and school ambient conditions against the dose were only able to account for, at most, six percent of the variance in the exposure. This paper demonstrates that incorporating activity patterns when calculating exposure can improve the estimate of exposure compared to its calculation from ambient conditions.

  12. Dynamic Labyrinthine Pattern in an Active Liquid Film

    CERN Document Server

    Chen, Yong-Jun; Yoshikawa, Kenichi

    2012-01-01

    We report the generation of a dynamic labyrinthine pattern in an active alcohol film. A dynamic labyrinthine pattern is formed along the contact line of air/pentanol/aqueous three phases. The contact line shows a clear time-dependent change with regard to both perimeter and area of a domain. An autocorrelation analysis of time-development of the dynamics of the perimeter and area revealed a strong geometric correlation between neighboring patterns. The pattern showed autoregressive behavior. The behavior of the dynamic pattern is strikingly different from those of stationary labyrinthine patterns. The essential aspects of the observed dynamic pattern are reproduced by a diffusion-controlled geometric model.

  13. Organogenesis in Dioscoreophyllum cumminsii (Stapf Diels

    Directory of Open Access Journals (Sweden)

    Oselebe, HO.

    2007-01-01

    Full Text Available Dioscoreophyllum cumminsii (Stapf Diels (Menispermaceae est une liane de sous-bois des forêts tropicales fermées dont les fruits contiennent une protéine très sucrée dénommée monelline. Le comportement in vitro d'explants caulinaires de D. cumminsii a été étudié en 1998 au laboratoire de culture de tissu végétal et de biotechnologie de l'université du Nigeria, Nsukka. Les explants prélevés sur des plantules produites en serre au jardin botanique de l'université ont émis des calles friables de couleur brune dans les milieux de cultures Arnold et Eriksson (AE, Schenk et Hildebrandt (SH, Gamborg, Miller et Ojima (B5 et Murashige et Skoog (MS, suppléés avec 2 mg.l-1 de 2,4-D. Le milieu MS solidifié avec 10 g.l-1 d'agar et suppléé avec 1 - 3 mg.l-1 de 2,4-D ou 1 - 5 mg.l-1 de NAA a donné la meilleure induction de calles. Le rajout de kinétine (1 - 5 mg.l-1 favorise la formation de calles actives et se révèle indispensable avec l'auxine pour assurer une croissance illimitée et le maintien en culture des calles issus des explants caulinaires de D. cumminsii. Cependant, la kinétine seule inhibe la formation et la croissance des calles. La rhizogénèse s'observe fréquemment chez les calles produites en milieu MS suppléé avec différentes combinaisons d'auxine et de kinétine. L'optimum de rhizogénèse s'observe avec rajout de soit 1 mg.l-1 de NAA + 1 mg.l-1 de kinétine soit 2 mg.l-1 de NAA + 5 mg.l-1 de kinétine.

  14. West African spatial patterns of economic activities

    DEFF Research Database (Denmark)

    Walther, Olivier; Howard, Allen; Retaillé, Denis

    2015-01-01

    Over the last 30 years, two different bodies of literature developed by both US historians and francophone geographers have moved toward similar conclusions regarding West African economic spatial patterns. Despite their different backgrounds, both the ‘spatial factor’ approach promoted...

  15. Physical activity patterns and metabolic syndrome in Costa Rica.

    Science.gov (United States)

    Hastert, Theresa A; Gong, Jian; Campos, Hannia; Baylin, Ana

    2015-01-01

    To examine whether total physical activity or activity patterns are associated with metabolic syndrome and its components. Participants include 1994 controls from a case-control study of non-fatal myocardial infarction in Costa Rica (1994-2004). Physical activity was assessed via self-administered questionnaire and patterns were identified using principal components analysis. Metabolic syndrome was assessed via blood samples and anthropometry measurements from in-home study visits. Prevalence ratios (PRs) and 95% confidence intervals (CIs) were calculated using log binomial regression. Adjusted least squares means of metabolic syndrome components were calculated by quintile of total activity and pattern scores. Four activity patterns were identified: rest/sleep, agricultural, light indoor activity, and manual labor. Total activity was not associated with metabolic syndrome. Metabolic syndrome prevalence was 20% lower in participants with the highest scores on the agricultural job pattern compared to those with the lowest (PR: 0.80, 95% CI: 0.68-0.94). Higher total activity was associated with lower triglycerides and lower HDL cholesterol. Higher scores on each pattern were inversely associated with metabolic syndrome components, particularly waist circumference and fasting blood glucose. Patterns or types of physical activity may be more strongly associated with metabolic syndrome and its components than total activity levels. Copyright © 2014 Elsevier Inc. All rights reserved.

  16. Physical activity patterns and metabolic syndrome in Costa Rica

    Science.gov (United States)

    Hastert, Theresa A.; Gong, Jian; Campos, Hannia; Baylin, Ana

    2015-01-01

    Objective To examine whether total physical activity or activity patterns are associated with metabolic syndrome and its components. Methods Participants include 1,994 controls from a case-control study of non-fatal myocardial infarction in Costa Rica (1994–2004). Physical activity was assessed via self-administered questionnaire and patterns were identified using principal components analysis. Metabolic syndrome was assessed via blood samples and anthropometry measurements from in-home study visits. Prevalence ratios (PR) and 95% confidence intervals (CI) were calculated using log binomial regression. Adjusted least squares means of metabolic syndrome components were calculated by quintile of total activity and pattern scores. Results Four activity patterns were identified: rest/sleep, agricultural, light indoor activity, and manual labor. Total activity was not associated with metabolic syndrome. Metabolic syndrome prevalence was 20% lower in participants with the highest scores on the agricultural job pattern compared to those with the lowest (PR: 0.80, 95% CI: 0.68–0.94). Higher total activity was associated with lower triglycerides and lower HDL cholesterol. Higher scores on each pattern were inversely associated with metabolic syndrome components, particularly waist circumference and fasting blood glucose. Conclusions Patterns or types of physical activity may be more strongly associated with metabolic syndrome and its components than total activity levels. PMID:25445330

  17. Correlates of US adult physical activity and sedentary behavior patterns.

    Science.gov (United States)

    Jones, Sydney A; Wen, Fang; Herring, Amy H; Evenson, Kelly R

    2016-12-01

    Physical activity and sedentary behavior patterns may be differentially associated with socio-demographic and health measures. We explored correlates of day-to-day patterns over a week in accelerometer measured physical activity and sedentary behavior to inform intervention development. Cross-sectional study. National Health and Nutrition Examination Survey (NHANES) adult participants (≥20 years) in 2003-2006 wore an accelerometer for 1 week. Accelerometer data from 7236 participants were used to derive latent classes describing day-to-day patterns over a week of physical activity and sedentary behavior. Correlates of each pattern were identified using multinomial logistic regression from 21 potential variables grouped into four domains: socio-demographic, acculturation, cardiovascular, and health history. Older age, female sex, higher body mass index, and history of chronic disease were consistently associated with lower odds of being in a more active compared to the least active class. In contrast, being employed, speaking Spanish at home, and having better self-rated health were associated with higher odds of being in a more active compared to the least active class. Correlates of physical activity and sedentary behavior patterns were identified from all domains (socio-demographic, acculturation, cardiovascular, and health history). Most correlates that were positively associated with physical activity were negatively associated with sedentary behavior. Better understanding of the correlates of physical activity and sedentary behavior patterns can inform interventions to promote physical activity and reduce sedentary behavior. Copyright © 2016 Sports Medicine Australia. Published by Elsevier Ltd. All rights reserved.

  18. A theoretical investigation on the regioselectivity of the intramolecular hetero Diels-Alder and 1,3-dipolar cycloaddition of 2-vinyloxybenzaldehyde derivatives

    Directory of Open Access Journals (Sweden)

    Hamzehloueian Mahshid

    2014-01-01

    Full Text Available The present study reports a systematic computational analysis of the two possible pathways, fused and bridged, for an intramolecular hetero Diels-Alder (IMHDA and an intramolecular 1,3-dipolar cycloaddition (IMDCA of 2-vinyloxybenzaldehyde derivatives. The potential energy surface analysis for both reactions is in agreement with experimental observations. The activation energies associated with the two regioisomeric channels in IMHDA reaction show that the bridged product is favored, although in IMDCA, the most stable TS results the fused product. The global electronic properties of fragments within each molecule were studied to discuss the reactivity patterns and charge transfer direction in the intramolecular processes. The asynchronicity of the bond formation and aromaticity of the optimized TSs in the Diels-Alder reaction as well as cycloaddition reaction were evaluated. Finally, 1H NMR chemical shifts of the possible regioisomers have been calculated using the GIAO method which of the most stable products are in agreement with the experimental data in the both reaction.

  19. Classifying sows' activity types from acceleration patterns

    DEFF Research Database (Denmark)

    Cornou, Cecile; Lundbye-Christensen, Søren

    2008-01-01

    -dimensional axes, plus the length of the acceleration vector) are selected for each activity. Each time series is modeled using a Dynamic Linear Model with cyclic components. The classification method, based on a Multi-Process Kalman Filter (MPKF), is applied to a total of 15 times series of 120 observations......An automated method of classifying sow activity using acceleration measurements would allow the individual sow's behavior to be monitored throughout the reproductive cycle; applications for detecting behaviors characteristic of estrus and farrowing or to monitor illness and welfare can be foreseen....... This article suggests a method of classifying five types of activity exhibited by group-housed sows. The method involves the measurement of acceleration in three dimensions. The five activities are: feeding, walking, rooting, lying laterally and lying sternally. Four time series of acceleration (the three...

  20. The Influence of Epoch Length on Physical Activity Patterns Varies by Child's Activity Level

    Science.gov (United States)

    Nettlefold, Lindsay; Naylor, P. J.; Warburton, Darren E. R.; Bredin, Shannon S. D.; Race, Douglas; McKay, Heather A.

    2016-01-01

    Purpose: Patterns of physical activity (PA) and sedentary time, including volume of bouted activity, are important health indicators. However, the effect of accelerometer epoch length on measurement of these patterns and associations with health outcomes in children remain unknown. Method: We measured activity patterns in 308 children (52% girls,…

  1. West African spatial patterns of economic activities

    DEFF Research Database (Denmark)

    Walther, Olivier; Howard, Allen; Retaillé, Denis

    2015-01-01

    by historians and the ‘mobile space’ approach developed by geographers view exchange centres as nodes of transnational trade networks and places in production territories, and perceive spatial dynamics as highly dependent on shifts of trade flows and production activities. The objective of this article...

  2. Muscle activation patterns in posttraumatic neck pain

    NARCIS (Netherlands)

    Nederhand, Marcus Johannes

    2003-01-01

    As an important consequence of our research, we question the relevance of the criteria of the WAD injury severity classification system. We showed that the musculoskeletal signs in WAD grade II are not characterized by muscle spasm, (i.e. increase of muscle activity), but rather by a decrease in mus

  3. Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil

    Science.gov (United States)

    Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Guerrero, Leandro; Seely, Mary; Cowan, Don A.

    2017-01-01

    Microbes in hot desert soil partake in core ecosystem processes e.g., biogeochemical cycling of carbon. Nevertheless, there is still a fundamental lack of insights regarding short-term (i.e., over a 24-hour [diel] cycle) microbial responses to highly fluctuating microenvironmental parameters like temperature and humidity. To address this, we employed T-RFLP fingerprinting and 454 pyrosequencing of 16S rRNA-derived cDNA to characterize potentially active bacteria in Namib Desert soil over multiple diel cycles. Strikingly, we found that significant shifts in active bacterial groups could occur over a single 24-hour period. For instance, members of the predominant Actinobacteria phyla exhibited a significant reduction in relative activity from morning to night, whereas many Proteobacterial groups displayed an opposite trend. Contrary to our leading hypothesis, environmental parameters could only account for 10.5% of the recorded total variation. Potential biotic associations shown through co-occurrence networks indicated that non-random inter- and intra-phyla associations were ‘time-of-day-dependent’ which may constitute a key feature of this system. Notably, many cyanobacterial groups were positioned outside and/or between highly interconnected bacterial associations (modules); possibly acting as inter-module ‘hubs’ orchestrating interactions between important functional consortia. Overall, these results provide empirical evidence that bacterial communities in hot desert soils exhibit complex and diel-dependent inter-community associations. PMID:28071697

  4. Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil

    Science.gov (United States)

    Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Guerrero, Leandro; Seely, Mary; Cowan, Don A.

    2017-01-01

    Microbes in hot desert soil partake in core ecosystem processes e.g., biogeochemical cycling of carbon. Nevertheless, there is still a fundamental lack of insights regarding short-term (i.e., over a 24-hour [diel] cycle) microbial responses to highly fluctuating microenvironmental parameters like temperature and humidity. To address this, we employed T-RFLP fingerprinting and 454 pyrosequencing of 16S rRNA-derived cDNA to characterize potentially active bacteria in Namib Desert soil over multiple diel cycles. Strikingly, we found that significant shifts in active bacterial groups could occur over a single 24-hour period. For instance, members of the predominant Actinobacteria phyla exhibited a significant reduction in relative activity from morning to night, whereas many Proteobacterial groups displayed an opposite trend. Contrary to our leading hypothesis, environmental parameters could only account for 10.5% of the recorded total variation. Potential biotic associations shown through co-occurrence networks indicated that non-random inter- and intra-phyla associations were ‘time-of-day-dependent’ which may constitute a key feature of this system. Notably, many cyanobacterial groups were positioned outside and/or between highly interconnected bacterial associations (modules); possibly acting as inter-module ‘hubs’ orchestrating interactions between important functional consortia. Overall, these results provide empirical evidence that bacterial communities in hot desert soils exhibit complex and diel-dependent inter-community associations.

  5. The physical activity patterns of children with autism

    Directory of Open Access Journals (Sweden)

    Ulrich Dale

    2011-10-01

    Full Text Available Abstract Background Although motor deficits are gaining attention in autism research much less attention has been paid to the physical activity patterns in this group of children. The participants in this study were a group of children with autism spectrum disorder (N = 72 between the ages of 9-18 years. This cross-sectional study explored the physical activity patterns of seventy-two children with autism spectrum disorder as they aged. Findings Results indicated significant differences between the mean time spent in moderate to vigorous physical activity and the mean time spent in sedentary activity. Older children with autism spectrum disorder are significantly more physically inactive, compared to younger children. Conclusions Physical activity programs and interventions need to address this deficit, in physical activity. Children with autism have a similar trend in physical activity patterns compared to their peers without autism; associated benefits and future research will be discussed.

  6. Physical Activity, Sedentary Behavior, and Dietary Patterns among Children

    NARCIS (Netherlands)

    Gubbels, J.S.; van Assema, P.; Kremers, S.P.

    2013-01-01

    Energy balance-related behavioral patterns find their origin in early The current paper provides an overview of studies that have examined behavioral patterns, i.e., the clustering of dietary behaviors, physical activity, and/or sedentary behavior. The paper discusses the importance examining energy

  7. Highly enantioselective aza-Diels-Alder reaction of 1-azadienes with enecarbamates catalyzed by chiral phosphoric acids.

    Science.gov (United States)

    He, Long; Laurent, Gregory; Retailleau, Pascal; Folléas, Benoît; Brayer, Jean-Louis; Masson, Géraldine

    2013-10-11

    On demand: A highly enantio- and diastereoselective synthesis of 6-amino- trisubstituted tetrahydropyridine compounds has been developed through the inverse-electron-demand aza-Diels-Alder reaction of N-aryl α,β-unsaturated ketimines with enecarbamates (E)-1. Chiral phosphoric acid catalysts achieve simultaneous activation of both the 1-azadiene and dienophile partners.

  8. Objectively measured activity patterns among adults in residential aged care

    National Research Council Canada - National Science Library

    Reid, Natasha; Eakin, Elizabeth; Henwood, Timothy; Keogh, Justin W L; Senior, Hugh E; Gardiner, Paul A; Winkler, Elisabeth; Healy, Genevieve N

    2013-01-01

    .... Ambulatory, older (≥60 years) residential aged care adults without cognitive impairment. Feasibility was assessed by consent rate, sleep/wear diary completion, and through interviews with staff/participants. Activity patterns...

  9. Variação nictemeral da clorofila a, produção primária do fitoplâncton e fatores ambientais da região de Ubatuba (Lat. 23º30'S Long. 45º06'W Diel variations in chlorophyll a, phytoplancton primary production and enviromental factors from Ubatuba region (Lat. 23º30'S Long. 45º06'W

    Directory of Open Access Journals (Sweden)

    C. Teixeira

    1991-01-01

    Full Text Available A series of experiments with natural phytoplankton populations was carried out to study the diel variation of chlrophyll a, primary production and some environmental factors. Samples were collected from surface over a period of 24 hours and always from one fixed station located in Flamengo Inlet, Ubatuba region, southern Brazil The experiments were performed in situ and simulated conditions to verify the patterns of diel cycles of both biotic and abiotic factors. The results obtained showed that diel variations were markedly pronounced mainly in relation to primary production and chlorophyll a. Diel variations of biological factors seems to be due to exogenous and endogenous phenomena.

  10. Assessing time-integrated dissolved concentrations and predicting toxicity of metals during diel cycling in streams

    Science.gov (United States)

    Balistrieri, Laurie S.; Nimick, David A.; Mebane, Christopher A.

    2012-01-01

    Evaluating water quality and the health of aquatic organisms is challenging in systems with systematic diel (24 hour) or less predictable runoff-induced changes in water composition. To advance our understanding of how to evaluate environmental health in these dynamic systems, field studies of diel cycling were conducted in two streams (Silver Bow Creek and High Ore Creek) affected by historical mining activities in southwestern Montana. A combination of sampling and modeling tools were used to assess the toxicity of metals in these systems. Diffusive Gradients in Thin Films (DGT) samplers were deployed at multiple time intervals during diel sampling to confirm that DGT integrates time-varying concentrations of dissolved metals. Thermodynamic speciation calculations using site specific water compositions, including time-integrated dissolved metal concentrations determined from DGT, and a competitive, multiple-metal biotic ligand model incorporated into the Windemere Humic Aqueous Model Version 6.0 (WHAM VI) were used to determine the chemical speciation of dissolved metals and biotic ligands. The model results were combined with previously collected toxicity data on cutthroat trout to derive a relationship that predicts the relative survivability of these fish at a given site. This integrative approach may prove useful for assessing water quality and toxicity of metals to aquatic organisms in dynamic systems and evaluating whether potential changes in environmental health of aquatic systems are due to anthropogenic activities or natural variability.

  11. Seasonal and diel movements of white sturgeon in the lower columbia river

    Science.gov (United States)

    Parsley, M.J.; Popoff, N.D.; Van Der Leeuw, B. K.; Wright, C.D.

    2008-01-01

    Continuous monitoring of the movements and depths used by white sturgeon Acipenser transmontanus with acoustic telemetry technologies in the lower Columbia River provided information on diel and seasonal migrations, local movements, and site fidelity. White sturgeon moved to shallower water at night and showed greater activity, inferred from rates of movement, than during daytime. The extent of local movement within a season was variable among fish; some fish readily moved among habitats while the movements of others were more constrained. White sturgeon were absent from the study area (river kilometers 45-52) during winter and returned from upstream during the spring, confirming an upstream seasonal migration in the fall and downstream migration in spring. The return of individual fish and reoccupation of areas previously inhabited showed that some white sturgeon exhibit site fidelity. This work shows that studies seeking to characterize habitat for white sturgeon need to be cognizant of diel migrations and site fidelity. We urge caution in the use of limited fish location data to describe habitats if diel activities and fine-scale movements are not known.

  12. Electrical activity patterns and the functional maturation of the neocortex.

    Science.gov (United States)

    Kilb, Werner; Kirischuk, Sergei; Luhmann, Heiko J

    2011-11-01

    At the earliest developmental stages, sensory neocortical areas in various species reveal distinct patterns of spontaneous neuronal network activity. These activity patterns either propagate over large neocortical areas or synchronize local neuronal ensembles. In vitro and in vivo experiments indicate that these spontaneous activity patterns are generated from neuronal networks in the cerebral cortex, in subcortical structures or in the sensory periphery (retina, cochlea, whiskers). At early stages spontaneous periphery-driven and also sensory evoked activity is relayed to the developing cerebral cortex via the thalamus and the neocortical subplate, which amplifies the afferent sensory input. These early local and large-scale neuronal activity patterns influence a variety of developmental processes during corticogenesis, such as neurogenesis, apoptosis, neuronal migration, differentiation and network formation. The experimental data also indicate that disturbances in early neuronal patterns may have an impact on the development of cortical layers, columns and networks. In this article we review our current knowledge on the origin of early electrical activity patterns in neocortical sensory areas and their functional implications on shaping developing cortical networks.

  13. Mining continuous activity patterns from animal trajectory data

    Science.gov (United States)

    Wang, Y.; Luo, Ze; Baoping, Yan; Takekawa, John Y.; Prosser, Diann J.; Newman, Scott H.

    2014-01-01

    The increasing availability of animal tracking data brings us opportunities and challenges to intuitively understand the mechanisms of animal activities. In this paper, we aim to discover animal movement patterns from animal trajectory data. In particular, we propose a notion of continuous activity pattern as the concise representation of underlying similar spatio-temporal movements, and develop an extension and refinement framework to discover the patterns. We first preprocess the trajectories into significant semantic locations with time property. Then, we apply a projection-based approach to generate candidate patterns and refine them to generate true patterns. A sequence graph structure and a simple and effective processing strategy is further developed to reduce the computational overhead. The proposed approaches are extensively validated on both real GPS datasets and large synthetic datasets.

  14. Diel infection of cyanobacteria by cyanophages

    Directory of Open Access Journals (Sweden)

    Tianchi eNi

    2016-01-01

    Full Text Available Cyanobacteria exhibit biological rhythms as an adaptation to the daily light-dark (diel cycle. Light is also crucial for bacteriophages (cyanophages that infect cyanobacteria. As the first step of infection, the adsorption of some cyanophages to their host cells is light-dependent. Moreover, cyanophage replication is affected by light intensity and possibly the host cell cycle. Photosynthesis and carbon metabolism genes have been found in cyanophage genomes. With these genes, cyanophages may affect the host metabolic rhythm. Field studies suggest that cyanophage infection of cyanobacteria in aquatic environments is synchronized directly or indirectly to the light-dark cycle. These discoveries are beginning to reveal how the daily light-dark cycle shapes the interaction of cyanophages and cyanobacteria, which eventually influences matter and energy transformation in aquatic environments.

  15. Perceptual similarity of visual patterns predicts dynamic neural activation patterns measured with MEG.

    Science.gov (United States)

    Wardle, Susan G; Kriegeskorte, Nikolaus; Grootswagers, Tijl; Khaligh-Razavi, Seyed-Mahdi; Carlson, Thomas A

    2016-05-15

    Perceptual similarity is a cognitive judgment that represents the end-stage of a complex cascade of hierarchical processing throughout visual cortex. Previous studies have shown a correspondence between the similarity of coarse-scale fMRI activation patterns and the perceived similarity of visual stimuli, suggesting that visual objects that appear similar also share similar underlying patterns of neural activation. Here we explore the temporal relationship between the human brain's time-varying representation of visual patterns and behavioral judgments of perceptual similarity. The visual stimuli were abstract patterns constructed from identical perceptual units (oriented Gabor patches) so that each pattern had a unique global form or perceptual 'Gestalt'. The visual stimuli were decodable from evoked neural activation patterns measured with magnetoencephalography (MEG), however, stimuli differed in the similarity of their neural representation as estimated by differences in decodability. Early after stimulus onset (from 50ms), a model based on retinotopic organization predicted the representational similarity of the visual stimuli. Following the peak correlation between the retinotopic model and neural data at 80ms, the neural representations quickly evolved so that retinotopy no longer provided a sufficient account of the brain's time-varying representation of the stimuli. Overall the strongest predictor of the brain's representation was a model based on human judgments of perceptual similarity, which reached the limits of the maximum correlation with the neural data defined by the 'noise ceiling'. Our results show that large-scale brain activation patterns contain a neural signature for the perceptual Gestalt of composite visual features, and demonstrate a strong correspondence between perception and complex patterns of brain activity.

  16. Environmental Influences On Diel Calling Behavior In Baleen Whales

    Science.gov (United States)

    2015-09-30

    1 DISTRIBUTION STATEMENT A. Approved for public release; distribution is unlimited. Environmental Influences On Diel Calling Behavior In...understanding of the social and environmental factors that influence variability in the calling behavior of baleen whales. One of the most prevalent...observations in passive acoustic recordings over scales of days to months is diel calling behavior (i.e., higher calling rates by day versus night or

  17. Muscle activity pattern dependent pain development and alleviation

    DEFF Research Database (Denmark)

    Sjøgaard, Gisela; Søgaard, Karen

    2014-01-01

    during physical activities at leisure and sport the motor recruitment patterns are more dynamic including regularly relatively high muscle forces - also activating type 2 muscles fibers - as well as periods of full relaxation even of the type 1 muscle fibers. Such activity is unrelated to muscle pain......Muscle activity is for decades considered to provide health benefits irrespectively of the muscle activity pattern performed and whether it is during e.g. sports, transportation, or occupational work tasks. Accordingly, the international recommendations for public health-promoting physical activity...... do not distinguish between occupational and leisure time physical activity. However, in this body of literature, attention has not been paid to the extensive documentation on occupational physical activity imposing a risk of impairment of health - in particular musculoskeletal health in terms...

  18. Light-induced hetero-Diels-Alder cycloaddition: a facile and selective photoclick reaction.

    Science.gov (United States)

    Arumugam, Selvanathan; Popik, Vladimir V

    2011-04-13

    2-Napthoquinone-3-methides (oNQMs) generated by efficient photodehydration (Φ=0.2) of 3-(hydroxymethyl)-2-naphthol undergo facile hetero-Diels-Alder addition (k(D-A)∼ 4×10(4) M(-1) s(-1)) to electron-rich polarized olefins in an aqueous solution. The resulting photostable benzo[g]chromans are produced in high to quantitative yield. The unreacted oNQM is rapidly hydrated (k(H2O) ∼145 s(-1)) to regenerate the starting diol. This competition between hydration and cycloaddition makes oNQMs highly selective, since only vinyl ethers and enamines are reactive enough to form the Diels-Alder adduct in an aqueous solution; no cycloaddition was observed with other types of alkenes. To achieve photolabeling or photoligation of two substrates, one is derivatized with a vinyl ether moiety, while 3-(hydroxymethyl)-2-naphthol is attached to the other via an appropriate linker. The light-induced Diels-Alder "click" strategy permits the formation of either a permanent or hydrolytically labile linkage. Rapid kinetics of this photoclick reaction (k=4×10(4) M(-1) s(-1)) is useful for time-resolved applications. The short lifetime (τ ∼7 ms in H(2)O) of the active form of the photoclick reagent prevents its migration from the site of irradiation, thus, allowing for spatial control of the ligation or labeling.

  19. Activity Patterns in a Subterranean Social Rodent, Spalacopus cyanus (Octodontidae)

    NARCIS (Netherlands)

    Begall, Sabine; Daan, S.; Burda, H.; Overkamp, G.J.F.; Tomasi, Thomas E.

    2002-01-01

    Daily patterns of activity were studied under laboratory conditions in 12 coruros, Spalacopus cyanus, subterranean social rodents originally from Chile. When able to burrow, coruros spent 90% of the total time underground, and surface activity occurred during the 1st hours of darkness. When prevente

  20. Patterns of Children's Participation in Unorganized Physical Activity

    Science.gov (United States)

    Findlay, Leanne C.; Garner, Rochelle E.; Kohen, Dafna E.

    2010-01-01

    Children's leisure-time or unorganized physical activity is associated with positive physical and mental health, yet there is little information available on tracking and predicting participation throughout the childhood and adolescent years. The purpose of the current study was to explore patterns of unorganized physical activity participation of…

  1. Oral Electromyography Activation Patterns for Speech Are Similar in

    Science.gov (United States)

    Walsh, Bridget; Smith, Anne

    2013-01-01

    Purpose: In this study, the authors determined whether basic patterns of muscle activation for speech were similar in preschool children who stutter and in their fluent peers. Method: Right and left lower lip muscle activity were recorded during conversational speech and sentence repetition in 64 preschool children diagnosed as stuttering (CWS)…

  2. Culturing Synechocystis sp. Strain PCC 6803 with N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs

    Science.gov (United States)

    Angermayr, S. Andreas; van Alphen, Pascal; Hasdemir, Dicle; Kramer, Gertjan; Iqbal, Muzamal; van Grondelle, Wilmar; Hoefsloot, Huub C.; Choi, Young Hae

    2016-01-01

    ABSTRACT Investigating the physiology of cyanobacteria cultured under a diel light regime is relevant for a better understanding of the resulting growth characteristics and for specific biotechnological applications that are foreseen for these photosynthetic organisms. Here, we present the results of a multiomics study of the model cyanobacterium Synechocystis sp. strain PCC 6803, cultured in a lab-scale photobioreactor in physiological conditions relevant for large-scale culturing. The culture was sparged with N2 and CO2, leading to an anoxic environment during the dark period. Growth followed the availability of light. Metabolite analysis performed with 1H nuclear magnetic resonance analysis showed that amino acids involved in nitrogen and sulfur assimilation showed elevated levels in the light. Most protein levels, analyzed through mass spectrometry, remained rather stable. However, several high-light-response proteins and stress-response proteins showed distinct changes at the onset of the light period. Microarray-based transcript analysis found common patterns of ∼56% of the transcriptome following the diel regime. These oscillating transcripts could be grouped coarsely into genes that were upregulated and downregulated in the dark period. The accumulated glycogen was degraded in the anaerobic environment in the dark. A small part was degraded gradually, reflecting basic maintenance requirements of the cells in darkness. Surprisingly, the largest part was degraded rapidly in a short time span at the end of the dark period. This degradation could allow rapid formation of metabolic intermediates at the end of the dark period, preparing the cells for the resumption of growth at the start of the light period. IMPORTANCE Industrial-scale biotechnological applications are anticipated for cyanobacteria. We simulated large-scale high-cell-density culturing of Synechocystis sp. PCC 6803 under a diel light regime in a lab-scale photobioreactor. In BG-11 medium

  3. Culturing Synechocystis sp. Strain PCC 6803 with N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs.

    Science.gov (United States)

    Angermayr, S Andreas; van Alphen, Pascal; Hasdemir, Dicle; Kramer, Gertjan; Iqbal, Muzamal; van Grondelle, Wilmar; Hoefsloot, Huub C; Choi, Young Hae; Hellingwerf, Klaas J

    2016-07-15

    Investigating the physiology of cyanobacteria cultured under a diel light regime is relevant for a better understanding of the resulting growth characteristics and for specific biotechnological applications that are foreseen for these photosynthetic organisms. Here, we present the results of a multiomics study of the model cyanobacterium Synechocystis sp. strain PCC 6803, cultured in a lab-scale photobioreactor in physiological conditions relevant for large-scale culturing. The culture was sparged with N2 and CO2, leading to an anoxic environment during the dark period. Growth followed the availability of light. Metabolite analysis performed with (1)H nuclear magnetic resonance analysis showed that amino acids involved in nitrogen and sulfur assimilation showed elevated levels in the light. Most protein levels, analyzed through mass spectrometry, remained rather stable. However, several high-light-response proteins and stress-response proteins showed distinct changes at the onset of the light period. Microarray-based transcript analysis found common patterns of ∼56% of the transcriptome following the diel regime. These oscillating transcripts could be grouped coarsely into genes that were upregulated and downregulated in the dark period. The accumulated glycogen was degraded in the anaerobic environment in the dark. A small part was degraded gradually, reflecting basic maintenance requirements of the cells in darkness. Surprisingly, the largest part was degraded rapidly in a short time span at the end of the dark period. This degradation could allow rapid formation of metabolic intermediates at the end of the dark period, preparing the cells for the resumption of growth at the start of the light period. Industrial-scale biotechnological applications are anticipated for cyanobacteria. We simulated large-scale high-cell-density culturing of Synechocystis sp. PCC 6803 under a diel light regime in a lab-scale photobioreactor. In BG-11 medium, Synechocystis grew only

  4. Diel periodicity of Drosophila suzukii (Diptera: Drosophilidae) under field conditions

    Science.gov (United States)

    Evans, Richard K.; Toews, Michael D.

    2017-01-01

    Drosophila suzukii Matsumura (Diptera: Drosophilidae), an economically important pest of blueberry and other thin-skinned fruits, persists and prolifically reproduces under seemingly lethal climatic conditions in the field. However, behavioral and physiological mechanisms employed by D. suzukii to tolerate such extreme climatic conditions in the field are unknown. The primary objective of this project was to investigate diel periodicity of D. suzukii and their reproductive success under field conditions as related by climatic factors such as temperature and relative humidity. Results show that D. suzukii reproductive success was significantly higher during the night (including dawn and dusk periods) than the day in terms of oviposition, pupation, adult eclosion, and the number of progeny per female. Female D. suzukii reproductive success was not significantly different between specific regions of a blueberry bush in relation to the amount of shade provided by the canopy. Our studies indicate that D. suzukii flight activity is crepuscular and is sensitive to fluctuations in temperature and relative humidity. Results also suggest that the majority of fly activity during peak hours is concentrated in areas around the border and within the center of blueberry orchards with little activity in the surrounding wooded areas. These findings suggest that D. suzukii prefers microclimate with mild temperatures and high humidity, and does not function well when exposed to direct sunlight with extreme heat. The authors propose that D. suzukii management strategies should be implemented during the early morning and immediately before darkness to maximize efficacy. PMID:28187140

  5. Are muscle activation patterns altered during shod and barefoot running with a forefoot footfall pattern?

    Science.gov (United States)

    Ervilha, Ulysses Fernandes; Mochizuki, Luis; Figueira, Aylton; Hamill, Joseph

    2016-09-14

    This study aimed to investigate the activation of lower limb muscles during barefoot and shod running with forefoot or rearfoot footfall patterns. Nine habitually shod runners were asked to run straight for 20 m at self-selected speed. Ground reaction forces and thigh and shank muscle surface electromyographic (EMG) were recorded. EMG outcomes (EMG intensity [iEMG], latency between muscle activation and ground reaction force, latency between muscle pairs and co-activation index between muscle pairs) were compared across condition (shod and barefoot), running cycle epochs (pre-strike, strike, propulsion) and footfall (rearfoot and forefoot) by ANOVA. Condition affected iEMG at pre-strike epoch. Forefoot and rearfoot strike patterns induced different EMG activation time patterns affecting co-activation index for pairs of thigh and shank muscles. All these timing changes suggest that wearing shoes or not is less important for muscle activation than the way runners strike the foot on the ground. In conclusion, the guidance for changing external forces applied on lower limbs should be pointed to the question of rearfoot or forefoot footfall patterns.

  6. Diel Production and Microheterotrophic Utilization of Dissolved Free Amino Acids in Waters Off Southern California

    OpenAIRE

    Carlucci, A. F.; Craven, D. B.; Henrichs, S. M.

    1984-01-01

    Diel patterns of dissolved free amino acid (DFAA) concentration and microheterotrophic utilization were examined in the spring and fall of 1981 in euphotic waters from the base of the mixed layer off the southern California coast. The average depths of the isotherms sampled were 19.2 m for spring and 9.0 m for fall. Total DFAA levels were generally higher in the spring than in the fall, 18 to 66 nM and 14 to 20 nM, respectively. Two daily concentration maxima and minima were observed for tota...

  7. Finding discriminative and interpretable patterns in sequences of surgical activities.

    Science.gov (United States)

    Forestier, Germain; Petitjean, François; Senin, Pavel; Riffaud, Laurent; Henaux, Pierre-Louis; Jannin, Pierre

    2017-09-21

    Surgery is one of the riskiest and most important medical acts that is performed today. Understanding the ways in which surgeries are similar or different from each other is of major interest to understand and analyze surgical behaviors. This article addresses the issue of identifying discriminative patterns of surgical practice from recordings of surgeries. These recordings are sequences of low-level surgical activities representing the actions performed by surgeons during surgeries. To discover patterns that are specific to a group of surgeries, we use the vector space model (VSM) which is originally an algebraic model for representing text documents. We split long sequences of surgical activities into subsequences of consecutive activities. We then compute the relative frequencies of these subsequences using the tf*idf framework and we use the Cosine similarity to classify the sequences. This process makes it possible to discover which patterns discriminate one set of surgeries recordings from another set. Experiments were performed on 40 neurosurgeries of anterior cervical discectomy (ACD). The results demonstrate that our method accurately identifies patterns that can discriminate between (1) locations where the surgery took place, (2) levels of expertise of surgeons (i.e., expert vs. intermediate) and even (3) individual surgeons who performed the intervention. We also show how the tf*idf weight vector can be used to both visualize the most interesting patterns and to highlight the parts of a given surgery that are the most interesting. Identifying patterns that discriminate groups of surgeon is a very important step in improving the understanding of surgical processes. The proposed method finds discriminative and interpretable patterns in sequences of surgical activities. Our approach provides intuitive results, as it identifies automatically the set of patterns explaining the differences between the groups. Copyright © 2017 Elsevier B.V. All rights

  8. Agricultural activity shapes the communication and migration patterns in Senegal

    Science.gov (United States)

    Martin-Gutierrez, S.; Borondo, J.; Morales, A. J.; Losada, J. C.; Tarquis, A. M.; Benito, R. M.

    2016-06-01

    The communication and migration patterns of a country are shaped by its socioeconomic processes. The economy of Senegal is predominantly rural, as agriculture employs over 70% of the labor force. In this paper, we use mobile phone records to explore the impact of agricultural activity on the communication and mobility patterns of the inhabitants of Senegal. We find two peaks of phone calls activity emerging during the growing season. Moreover, during the harvest period, we detect an increase in the migration flows throughout the country. However, religious holidays also shape the mobility patterns of the Senegalese people. Hence, in the light of our results, agricultural activity and religious holidays are the primary drivers of mobility inside the country.

  9. Diel vertical migration of European hake Merluccius merluccius and associated temperature histories: insights from a pilot data-storage tagging (DST) experiment.

    Science.gov (United States)

    De Pontual, H; Jolivet, A; Bertignac, M; Fablet, R

    2012-07-01

    A pioneering experiment of archival tagging of European hake Merluccius merluccius provided evidence of a diel vertical migration pattern which was analysed using an automatic method, developed and validated through time-frequency analyses. Frequent vertical movements across the thermocline were observed and fish experienced rapid temperature changes >7° C. These tagging-recapture data also suggested a homing behaviour to feeding grounds.

  10. Diels-Alder Cycloadditions: A MORE Experiment in the Organic Laboratory Including a Diene Identification Exercise Involving NMR Spectroscopy and Molecular Modeling

    Science.gov (United States)

    Shaw, Roosevelt; Severin, Ashika; Balfour, Miguel; Nettles, Columbus

    2005-01-01

    Two Diels-Alder reactions are described that are suitable for a MORE (microwave-induced organic reaction enhanced) experiment in the organic chemistry laboratory course. A second experiment in which the splitting patterns of the vinyl protons in the nuclear magnetic resonance (NMR) spectra of two MORE adducts are used in conjunction with molecular…

  11. Diazotrophic bacterioplankton in a coral reef lagoon: phylogeny, diel nitrogenase expression and response to phosphate enrichment.

    Science.gov (United States)

    Hewson, Ian; Moisander, Pia H; Morrison, Amanda E; Zehr, Jonathan P

    2007-05-01

    We investigated diazotrophic bacterioplankton assemblage composition in the Heron Reef lagoon (Great Barrier Reef, Australia) using culture-independent techniques targeting the nifH fragment of the nitrogenase gene. Seawater was collected at 3 h intervals over a period of 72 h (i.e. over diel as well as tidal cycles). An incubation experiment was also conducted to assess the impact of phosphate (PO(4)3*) availability on nifH expression patterns. DNA-based nifH libraries contained primarily sequences that were most similar to nifH from sediment, microbial mat and surface-associated microorganisms, with a few sequences that clustered with typical open ocean phylotypes. In contrast to genomic DNA sequences, libraries prepared from gene transcripts (mRNA amplified by reverse transcription-polymerase chain reaction) were entirely cyanobacterial and contained phylotypes similar to those observed in open ocean plankton. The abundance of Trichodesmium and two uncultured cyanobacterial phylotypes from previous studies (group A and group B) were studied by quantitative-polymerase chain reaction in the lagoon samples. These were detected as transcripts, but were not detected in genomic DNA. The gene transcript abundance of these phylotypes demonstrated variability over several diel cycles. The PO(4)3* enrichment experiment had a clearer pattern of gene expression over diel cycles than the lagoon sampling, however PO(4)3* additions did not result in enhanced transcript abundance relative to control incubations. The results suggest that a number of diazotrophs in bacterioplankton of the reef lagoon may originate from sediment, coral or beachrock surfaces, sloughing into plankton with the flooding tide. The presence of typical open ocean phylotype transcripts in lagoon bacterioplankton may indicate that they are an important component of the N cycle of the coral reef.

  12. Retinal waves coordinate patterned activity throughout the developing visual system.

    Science.gov (United States)

    Ackman, James B; Burbridge, Timothy J; Crair, Michael C

    2012-10-11

    The morphological and functional development of the vertebrate nervous system is initially governed by genetic factors and subsequently refined by neuronal activity. However, fundamental features of the nervous system emerge before sensory experience is possible. Thus, activity-dependent development occurring before the onset of experience must be driven by spontaneous activity, but the origin and nature of activity in vivo remains largely untested. Here we use optical methods to show in live neonatal mice that waves of spontaneous retinal activity are present and propagate throughout the entire visual system before eye opening. This patterned activity encompassed the visual field, relied on cholinergic neurotransmission, preferentially initiated in the binocular retina and exhibited spatiotemporal correlations between the two hemispheres. Retinal waves were the primary source of activity in the midbrain and primary visual cortex, but only modulated ongoing activity in secondary visual areas. Thus, spontaneous retinal activity is transmitted through the entire visual system and carries patterned information capable of guiding the activity-dependent development of complex intra- and inter-hemispheric circuits before the onset of vision.

  13. Discovering urban activity patterns in cell phone data

    OpenAIRE

    Widhalm, Peter; Yang, Yingxiang; Ulm, Michael; Athavale, Shounak; Gonzalez, Marta C.

    2015-01-01

    Massive and passive data such as cell phone traces provide samples of the whereabouts and movements of individuals. These are a potential source of information for models of daily activities in a city. The main challenge is that phone traces have low spatial precision and are sparsely sampled in time, which requires a precise set of techniques for mining hidden valuable information they contain. Here we propose a method to reveal activity patterns that emerge from cell phone data by analyzing...

  14. Time activity patterns: a case of south Durban, South Africa

    CSIR Research Space (South Africa)

    Matooane, M

    2010-08-01

    Full Text Available be insufficient to adequately represent the time-activity patterns of the south Durban population. Particular factors include, among others, the amount of time spent in varying microenvironments and the drivers for time spent in these microenvironments. Therefore...

  15. Activity Involvement in Aging Women: Career Pattern and Retirement.

    Science.gov (United States)

    Holahan, Carole Kovalic

    Some research has found that women's retirement from the labor force produces significant changes in their lives and requires further investigation. The effects of career pattern and retirement on activity involvement and life satisfaction for women who had been in the work force was investigated. Subjects were members of the Terman Study of the…

  16. New 30-Noroleanane Triterpenoid Saponins from Holboellia coriacea Diels

    Directory of Open Access Journals (Sweden)

    Wenbing Ding

    2016-06-01

    Full Text Available Three new 30-noroleanane triterpenoid saponins, akebonoic acid 28-O-β-d-glucopyranosyl-(1′′→6′-β-d-glucopyranosyl ester (1, akebonoic acid 28-O-(6′′-O-caffeoyl-β-d-glucopyranosyl-(1′′→6′-β-d-glucopyranosyl ester (Holboelliside A, 2 and 3β,20α,24-trihydroxy-29-norolean-12-en-28-oic acid 3-O-(6′-O-caffeoyl-β-d-glucopyranoside (Holboelliside B, 3 were isolated from the stems of Holboellia coriacea Diels, together with five known compounds, eupteleasaponin VIII (4, 3α-akebonoic acid (5, quinatic acid (6, 3β-hydroxy-30-norhederagenin (7 and quinatoside A (8. The structures of these compounds were determined on the basis of spectral and chemical evidence. Compounds 1–5 were evaluated for their inhibitory activity against three human tumors HepG2, HCT116 and SGC-7901 cell lines in vitro.

  17. Diel variations in stream chemistry and isotopic composition of dissolved inorganic carbon, upper Clark Fork River, Montana, USA

    Science.gov (United States)

    Parker, Stephen R.; Gammons, Christopher H.; Poulson, Simon R.; DeGrandpre, Michael D.

    2007-01-01

    Many rivers undergo diel (24-h) concentration fluctuations of pH, dissolved gases, trace metals, nutrients, and other chemical species. A study conducted in 1994 documented such behavior in the upper Clark Fork River, Montana, a stream whose headwaters have been severely impacted by historic metal mining, milling, and smelting. The purpose of the present investigation was to expand on these earlier findings by conducting simultaneous diel samplings at two sites on the upper Clark Fork River separated by 2.5 h of stream travel time. By monitoring two stations, it was possible to more closely examine the processes that control temporal and spatial gradients in stream chemistry. Another objective was to examine diel changes in the δ13C composition of dissolved inorganic C (DIC) and their relationship to biological activity in the stream. The most important findings of this study include: (1) concentrations of dissolved and particulate heavy metals increased during the night and decreased during the day, in agreement with previous work; (2) these changes were positively correlated to diel changes in pH, dissolved O2, and water temperature; (3) dissolved concentrations increased during the night at the lower site, but showed the opposite behavior at the upper site; and (4) diel changes in δ13C-DIC were noted at both sites, although the timing and magnitudes of the cycles differed. Hypotheses to explain the first two observations include: cyclic co-precipitation of divalent metals with carbonate minerals; pH- and temperature-dependent sorption of metal cations onto the streambed and suspended particles; or photosynthetically enhanced oxidation and removal of Fe and Mn oxides at biofilm surfaces during the daytime. The latter model explains the majority of the field observations, including night-time increases in particulate forms of Fe and other elements.

  18. Muscle activation patterns in patients with recurrent shoulder instability

    Science.gov (United States)

    Jaggi, Anju; Noorani, Ali; Malone, Alex; Cowan, Joseph; Lambert, Simon; Bayley, Ian

    2012-01-01

    Purpose: The aim of this study is to present muscle patterns observed with the direction of instability in a series of patients presenting with recurrent shoulder instability. Materials and Methods: A retrospective review was carried out on shoulder instability cases referred for fine wire dynamic electromyography (DEMG) studies at a specialist upper limb centre between 1981 and 2003. An experienced consultant clinical neurophysiologist performed dual needle insertion into four muscles (pectoralis major (PM), latissimus dorsi (LD), anterior deltoid (AD) and infraspinatus (IS)) in shoulders that were suspected to have increased or suppressed activation of muscles that could be contributing to the instability. Raw EMG signals were obtained while subjects performed simple uniplanar movements of the shoulder. The presence or absence of muscle activation was noted and compared to clinical diagnosis and direction of instability. Results: A total of 140 (26.6%) shoulders were referred for fine wire EMG, and 131 studies were completed. Of the shoulders tested, 122 shoulders (93%) were identified as having abnormal patterns and nine had normal patterns. PM was found to be more active in 60% of shoulders presenting with anterior instability. LD was found to be more active in 81% of shoulders with anterior instability and 80% with posterior instability. AD was found to be more active in 22% of shoulders with anterior instability and 18% with posterior instability. IS was found to be inappropriately inactive in only 3% of shoulders with anterior instability but in 25% with posterior instability. Clinical assessment identified 93% of cases suspected to have muscle patterning, but the specificity of the clinical assessment was only correct in 11% of cases. Conclusion: The DEMG results suggest that increased activation of LD may play a role in both anterior and posterior shoulder instability; increased activation of PM may play a role in anterior instability. PMID:23493512

  19. How networks communicate: propagation patterns in spontaneous brain activity.

    Science.gov (United States)

    Mitra, Anish; Raichle, Marcus E

    2016-10-05

    Initially regarded as 'noise', spontaneous (intrinsic) activity accounts for a large portion of the brain's metabolic cost. Moreover, it is now widely known that infra-slow (less than 0.1 Hz) spontaneous activity, measured using resting state functional magnetic resonance imaging of the blood oxygen level-dependent (BOLD) signal, is correlated within functionally defined resting state networks (RSNs). However, despite these advances, the temporal organization of spontaneous BOLD fluctuations has remained elusive. By studying temporal lags in the resting state BOLD signal, we have recently shown that spontaneous BOLD fluctuations consist of remarkably reproducible patterns of whole brain propagation. Embedded in these propagation patterns are unidirectional 'motifs' which, in turn, give rise to RSNs. Additionally, propagation patterns are markedly altered as a function of state, whether physiological or pathological. Understanding such propagation patterns will likely yield deeper insights into the role of spontaneous activity in brain function in health and disease.This article is part of the themed issue 'Interpreting blood oxygen level-dependent: a dialogue between cognitive and cellular neuroscience'.

  20. Cortisol patterns are associated with T cell activation in HIV.

    Directory of Open Access Journals (Sweden)

    Sarah Patterson

    Full Text Available The level of T cell activation in untreated HIV disease is strongly and independently associated with risk of immunologic and clinical progression. The factors that influence the level of activation, however, are not fully defined. Since endogenous glucocorticoids are important in regulating inflammation, we sought to determine whether less optimal diurnal cortisol patterns are associated with greater T cell activation.We studied 128 HIV-infected adults who were not on treatment and had a CD4(+ T cell count above 250 cells/µl. We assessed T cell activation by CD38 expression using flow cytometry, and diurnal cortisol was assessed with salivary measurements.Lower waking cortisol levels correlated with greater T cell immune activation, measured by CD38 mean fluorescent intensity, on CD4(+ T cells (r = -0.26, p = 0.006. Participants with lower waking cortisol also showed a trend toward greater activation on CD8(+ T cells (r = -0.17, p = 0.08. A greater diurnal decline in cortisol, usually considered a healthy pattern, correlated with less CD4(+ (r = 0.24, p = 0.018 and CD8(+ (r = 0.24, p = 0.017 activation.These data suggest that the hypothalamic-pituitary-adrenal (HPA axis contributes to the regulation of T cell activation in HIV. This may represent an important pathway through which psychological states and the HPA axis influence progression of HIV.

  1. Optimizing human activity patterns using global sensitivity analysis.

    Science.gov (United States)

    Fairchild, Geoffrey; Hickmann, Kyle S; Mniszewski, Susan M; Del Valle, Sara Y; Hyman, James M

    2014-12-01

    Implementing realistic activity patterns for a population is crucial for modeling, for example, disease spread, supply and demand, and disaster response. Using the dynamic activity simulation engine, DASim, we generate schedules for a population that capture regular (e.g., working, eating, and sleeping) and irregular activities (e.g., shopping or going to the doctor). We use the sample entropy (SampEn) statistic to quantify a schedule's regularity for a population. We show how to tune an activity's regularity by adjusting SampEn, thereby making it possible to realistically design activities when creating a schedule. The tuning process sets up a computationally intractable high-dimensional optimization problem. To reduce the computational demand, we use Bayesian Gaussian process regression to compute global sensitivity indices and identify the parameters that have the greatest effect on the variance of SampEn. We use the harmony search (HS) global optimization algorithm to locate global optima. Our results show that HS combined with global sensitivity analysis can efficiently tune the SampEn statistic with few search iterations. We demonstrate how global sensitivity analysis can guide statistical emulation and global optimization algorithms to efficiently tune activities and generate realistic activity patterns. Though our tuning methods are applied to dynamic activity schedule generation, they are general and represent a significant step in the direction of automated tuning and optimization of high-dimensional computer simulations.

  2. Objectively Measured Activity Patterns among Adults in Residential Aged Care

    Directory of Open Access Journals (Sweden)

    Natasha Reid

    2013-12-01

    Full Text Available Objectives: To determine the feasibility of using the activPAL3TM activity monitor, and, to describe the activity patterns of residential aged care residents. Design: Cross-sectional. Setting: Randomly selected aged care facilities within 100 km of the Gold Coast, Queensland, Australia. Participants: Ambulatory, older (≥60 years residential aged care adults without cognitive impairment. Measurements: Feasibility was assessed by consent rate, sleep/wear diary completion, and through interviews with staff/participants. Activity patterns (sitting/lying, standing, and stepping were measured via activPAL3TM monitors worn continuously for seven days. Times spent in each activity were described and then compared across days of the week and hours of the day using linear mixed models. Results: Consent rate was 48% (n = 41. Activity patterns are described for the 31 participants (mean age 84.2 years who provided at least one day of valid monitor data. In total, 14 (45% completed the sleep/wear diary. Participants spent a median (interquartile range of 12.4 (1.7 h sitting/lying (with 73% of this accumulated in unbroken bouts of ≥30 min, 1.9 (1.3 h standing, and 21.4 (36.7 min stepping during their monitored waking hours per day. Activity did not vary significantly by day of the week (p ≥ 0.05; stepping showed significant hourly variation (p = 0.018. Conclusions: Older adults in residential aged care were consistently highly sedentary. Feasibility considerations for objective activity monitoring identified for this population include poor diary completion and lost monitors.

  3. Sleep-related electrodermal activity patterns in impotent patients.

    Science.gov (United States)

    Ware, J C; Karacan, I; Salis, P J; Thornby, J; Hirshkowitz, M

    1984-01-01

    The etiology of erectile failure is not always clear despite the fact that recordings of nocturnal penile tumescence (NPT) are used to detect patients with a significant organic component to their complaint. We recorded electrodermal activity in addition to NPT in 60 impotent patients. Normally more electrodermal activity occurs in stage 2 than in stage REM sleep. Despite a similar total amount of electrodermal activity, organically impotent patients tended to have less electrodermal activity in stage 2 and more in stage REM sleep than those with normal NPT. This difference was due to a subgroup of 15 organically impotent patients with less electrodermal activity in stage 2 than in stage REM sleep. Because of this difference in the pattern of electrodermal activity in relation to sleep stages, the results suggest a central nervous system change is related to impaired erectile capability and abnormal NPT in these cases.

  4. Circadian pattern and burstiness in human communication activity

    CERN Document Server

    Jo, Hang-Hyun; Kertész, János; Kaski, Kimmo

    2011-01-01

    The temporal pattern of human communication is inhomogeneous and bursty, as reflected by the heavy tail distribution of the inter-event times. For the origin of this behavior two main mechanisms have been suggested: a) Externally driven inhomogeneities due to the circadian and weekly activity patterns and b) intrinsic correlation based inhomogeneity rooted deeply in the task handling strategies of humans. Here we address this question by providing systematic de-seasoning methods to remove the circadian and weekly patterns from the time series of communication events. We find that the heavy tails of the inter-event time distributions are robust with respect to this procedure indicating that burstiness is mostly caused by the latter mechanism b). Moreover, we find that our de-seasoning procedure improves the scaling behavior of the distribution.

  5. Communities in Neuronal Complex Networks Revealed by Activation Patterns

    CERN Document Server

    Costa, Luciano da Fontoura

    2008-01-01

    Recently, it has been shown that the communities in neuronal networks of the integrate-and-fire type can be identified by considering patterns containing the beginning times for each cell to receive the first non-zero activation. The received activity was integrated in order to facilitate the spiking of each neuron and to constrain the activation inside the communities, but no time decay of such activation was considered. The present article shows that, by taking into account exponential decays of the stored activation, it is possible to identify the communities also in terms of the patterns of activation along the initial steps of the transient dynamics. The potential of this method is illustrated with respect to complex neuronal networks involving four communities, each of a different type (Erd\\H{o}s-R\\'eny, Barab\\'asi-Albert, Watts-Strogatz as well as a simple geographical model). Though the consideration of activation decay has been found to enhance the communities separation, too intense decays tend to y...

  6. Activity patterns of the stone marten Martes foina Erxleben, 1777, in relation to some environmental factors

    Directory of Open Access Journals (Sweden)

    Mario Posillico

    1995-12-01

    Full Text Available Abstract Three stone martens (2 males, 1 female Martes foina Erxleben, 1777, were radio-tracked for 4, 2.5 and 12 months respectively, in a rural hilly area in Siena County, Central Italy. Food habits were assessed by faecal analysis, as percentage of occurrence and estimated volume. Diel, nocturnal, diurnal and crepuscular activity were measured as the proportion of active fixes on a 48 hours/fortnight basis. Seasonal variation of all activities was assessed and correlated to mean T°C, daylength, food and trophic niche breadth. Daily time budgets were also measured and compared between months and seasons. Fruits were the staple food in summer/autumn, followed by vertebrates and invertebrates. Vertebrates and invertebrates were the main food source in winter and spring. No significant difference of activity could be found between the three animals. Diel activity reached its maximum in summer, and decreased significantly throughout the rest of the year. Die1 activity did not differ significantly between subsequent seasons, whereas a statistically significant difference was found between every other season. Nocturnal activity peaked in winter and dropped in summer. It significantly differed between seasons but for spring vs. summer and autumn vs. winter. Diurnal activity differed significantly between seasons, but for spring vs. summer, when it reached its maximum, and for autumn vs. winter when it was at its minimum. Crepuscular activity remained constant throughout the year. The 24-hour distribution of active fixes showed a bimodal pattern in spring and summer, while in autumn and winter the activity pattern was unimodal, with a nocturnal peak. Time budget differed between seasons, but for autumn and winter vs. spring. Significant correlations between activities and abiotical variables (except rainfall were direct, but for nocturnal activity. No significant correlation was found with precipitation. Activity was not

  7. Persistent dynamic attractors in activity patterns of cultured neuronal networks

    Science.gov (United States)

    Wagenaar, Daniel A.; Nadasdy, Zoltan; Potter, Steve M.

    2006-05-01

    Three remarkable features of the nervous system—complex spatiotemporal patterns, oscillations, and persistent activity—are fundamental to such diverse functions as stereotypical motor behavior, working memory, and awareness. Here we report that cultured cortical networks spontaneously generate a hierarchical structure of periodic activity with a strongly stereotyped population-wide spatiotemporal structure demonstrating all three fundamental properties in a recurring pattern. During these “superbursts,” the firing sequence of the culture periodically converges to a dynamic attractor orbit. Precursors of oscillations and persistent activity have previously been reported as intrinsic properties of the neurons. However, complex spatiotemporal patterns that are coordinated in a large population of neurons and persist over several hours—and thus are capable of representing and preserving information—cannot be explained by known oscillatory properties of isolated neurons. Instead, the complexity of the observed spatiotemporal patterns implies large-scale self-organization of neurons interacting in a precise temporal order even in vitro, in cultures usually considered to have random connectivity.

  8. Lower arm electromyography (EMG) activity detection using local binary patterns.

    Science.gov (United States)

    McCool, Paul; Chatlani, Navin; Petropoulakis, Lykourgos; Soraghan, John J; Menon, Radhika; Lakany, Heba

    2014-09-01

    This paper presents a new electromyography activity detection technique in which 1-D local binary pattern histograms are used to distinguish between periods of activity and inactivity in myoelectric signals. The algorithm is tested on forearm surface myoelectric signals occurring due to hand gestures. The novel features of the presented method are that: 1) activity detection is performed across multiple channels using few parameters and without the need for majority vote mechanisms, 2) there are no per-channel thresholds to be tuned, which makes the process of activity detection easier and simpler to implement and less prone to errors, 3) it is not necessary to measure the properties of the signal during a quiescent period before using the algorithm. The algorithm is compared to other offline single- and double-threshold activity detection methods and, for the data sets tested, it is shown to have a better overall performance with greater tolerance to the noise in the real data set used.

  9. Artificial Diels-Alderase based on the transmembrane protein FhuA.

    Science.gov (United States)

    Osseili, Hassan; Sauer, Daniel F; Beckerle, Klaus; Arlt, Marcus; Himiyama, Tomoki; Polen, Tino; Onoda, Akira; Schwaneberg, Ulrich; Hayashi, Takashi; Okuda, Jun

    2016-01-01

    Copper(I) and copper(II) complexes were covalently linked to an engineered variant of the transmembrane protein Ferric hydroxamate uptake protein component A (FhuA ΔCVF(tev)). Copper(I) was incorporated using an N-heterocyclic carbene (NHC) ligand equipped with a maleimide group on the side arm at the imidazole nitrogen. Copper(II) was attached by coordination to a terpyridyl ligand. The spacer length was varied in the back of the ligand framework. These biohybrid catalysts were shown to be active in the Diels-Alder reaction of a chalcone derivative with cyclopentadiene to preferentially give the endo product.

  10. Chalcone-derived Diels-Alder adducts as NF-κB inhibitors from Morus alba.

    Science.gov (United States)

    Phung, Thi Xuan Binh; Tran, Thi Hong Hanh; Dan, Thi Thuy Hang; Chau, Van Minh; Hoang, Thanh Huong; Nguyen, Tien Dat

    2012-01-01

    A bioassay-guided phytochemical fractionation of the methanol extract of the Morus alba root barks led to the isolation of two chalcone-derived Diels-Alder adducts (1 and 2). Their structures were elucidated as kuwanon J 2,4,10″-trimethyl ether (1) and kuwanon R (2) by means of spectroscopic methods. Both compounds strongly inhibited nuclear transcription factor.κB activity with the IC₅₀ values of 4.65 and 7.38 μM, respectively.

  11. A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation.

    Science.gov (United States)

    Macho, Alberto P; Schwessinger, Benjamin; Ntoukakis, Vardis; Brutus, Alexandre; Segonzac, Cécile; Roy, Sonali; Kadota, Yasuhiro; Oh, Man-Ho; Sklenar, Jan; Derbyshire, Paul; Lozano-Durán, Rosa; Malinovsky, Frederikke Gro; Monaghan, Jacqueline; Menke, Frank L; Huber, Steven C; He, Sheng Yang; Zipfel, Cyril

    2014-03-28

    Innate immunity relies on the perception of pathogen-associated molecular patterns (PAMPs) by pattern-recognition receptors (PRRs) located on the host cell's surface. Many plant PRRs are kinases. Here, we report that the Arabidopsis receptor kinase EF-TU RECEPTOR (EFR), which perceives the elf18 peptide derived from bacterial elongation factor Tu, is activated upon ligand binding by phosphorylation on its tyrosine residues. Phosphorylation of a single tyrosine residue, Y836, is required for activation of EFR and downstream immunity to the phytopathogenic bacterium Pseudomonas syringae. A tyrosine phosphatase, HopAO1, secreted by P. syringae, reduces EFR phosphorylation and prevents subsequent immune responses. Thus, host and pathogen compete to take control of PRR tyrosine phosphorylation used to initiate antibacterial immunity.

  12. Depth-selection patterns and diel vertical migration of Daphnia ambigua (Crustacea: Cladocera in lake El Plateado Patrones de selección de profundidad y migración vertical de Daphnia ambigua (Crustacea: Cladocera en el lago El Plateado

    Directory of Open Access Journals (Sweden)

    RODRIGO RAMOS-JILIBERTO

    2001-09-01

    Full Text Available Eutrophic temperate and sub-tropical lakes often exhibit a marked vertical structure during the warm season that involves important spatial differences of physical, chemical and biological variables. Therefore, zooplankton is exposed to a highly heterogeneous environment in the vertical dimension. In this work, We analyze the depth-distribution of the cladoceran Daphnia ambigua in the eutrophic, monomictic lake El Plateado at midday and midnight, along with its relationship with the vertical distribution of water temperature and dissolved oxygen concentration. We also attempt to define whether or not this population exhibits a diel vertical migration. The results show significant changes in the day/night vertical distribution of D. ambigua during its growing season, with the exception of the last date. Also, the data revealed that average depth selected by D. ambigua becomes shallower with time, and the amplitude of the vertical migration decreases throughout the season. During the period of lake stratification, temperature appears positively correlated, and oxygen negatively correlated to the frequency of D. ambigua. It is suggested that oxygen concentration plays a crucial role in modulating the vertical migration behavior of D. ambigua in lake El Plateado, which has important consequences for understanding the atypical pattern of population dynamics exhibited by this speciesLos lagos templados y sub-tropicales a menudo presentan una marcada estructura vertical durante la estación cálida que involucra importantes diferencias espaciales de variables físicas, químicas y biológicas. El zooplancton se encuentra por ello expuesto a un ambiente marcadamente heterogéneo en su dimensión vertical. En este trabajo analizamos la distribución vertical del cladócero D. ambigua en el lago eutrófico y monomíctico El Plateado, a mediodía y a medianoche, y su relación con la distribución vertical de la temperatura del agua y concentración de ox

  13. Distributed patterns of brain activity that lead to forgetting

    OpenAIRE

    Ilke eOztekin; David eBadre

    2011-01-01

    HUMAN NEUROSCIENCE Distributed patterns of brain activity that lead to forgetting Ilke Öztekin1* and David Badre2,3 1 Department of Psychology, Koç University, Istanbul, Turkey 2 Department of Cognitive, Linguistic and Psychological Sciences, Brown University, Providence, RI, USA 3 Brown Institute for Brain Sciences, Brown University, Providence, RI, USA Proactive interference (PI), in which irrelevant information from prior learning disrupts memory performance, is widely...

  14. A database of circadian and diel rhythmic gene expression in the yellow fever mosquito Aedes aegypti.

    Science.gov (United States)

    Leming, Matthew T; Rund, Samuel S C; Behura, Susanta K; Duffield, Giles E; O'Tousa, Joseph E

    2014-12-17

    The mosquito species Aedes aegypti is the primary vector of many arboviral diseases, including dengue and yellow fevers, that are responsible for a large worldwide health burden. The biological rhythms of mosquitoes regulate many of the physiological processes and behaviors that influence the transmission of these diseases. For insight into the molecular basis of biological rhythms, diel and circadian gene expression profiling has been carried out for many species. To bring these resources to Aedes aegypti researchers, we used microarray technology to carry out a genome wide assessment of gene expression during the 24 hour light/dark (LD) cycle and during constant darkness (DD). The purpose of this report is to describe the methods, the validation of the results, and the organization of this database resource. The Aedes aegypti Circadian Database is a publicly accessible database that can be searched via a text-based query to visualize 44 hour temporal expression patterns of a given gene in Ae. aegypti heads under diel (observed under a 12 hour/12 hour LD cycle) and circadian (observed under DD) conditions. Profiles of gene expression under these conditions were assayed by Nimblegen 12-plex microarrays and rhythmicity was objectively assessed by the JTK_CYCLE algorithm. The output of the search is a graphical representation of the expression data along with computed period length, the time-of-day of gene expression peaks, and statistical determination for rhythmicity. Our results show that at least 7.9% of the gene set present in the Aedes aegypti head are rhythmic under LD conditions and 6.7% can be considered circadian, oscillating under constant dark conditions. We present these results in the Aedes aegypti Circadian Database through Bioclock, a public website hosted by the University of Notre Dame at http://www.nd.edu/~bioclock/. This website allows searchable browsing of this quantitative gene expression information. The visualization allows for gene

  15. Characterizing seasonal and diel vertical movement and habitat use of lake whitefish (Coregonus clupeaformis) in Clear Lake, Maine

    Science.gov (United States)

    Zydlewski, Joseph; Gorsky, Dimitry; Balsey, David

    2016-01-01

    Seasonal and daily vertical activity of lake whitefish Coregonus clupeaformis was studied in Clear Lake, Maine (253 ha), using acoustic telemetry from November 2004 to June 2009. Twenty adult lake whitefish were tagged with acoustic tags that had either a depth sensor or both depth and temperature sensors to assess vertical habitat use at a seasonal and daily resolution. Vertical habitat selection varied seasonally and was strongly influenced by temperature. Between December and April, when the lake was covered with ice, surface temperature was below 2°C and tagged individuals occupied deep areas of the lake (∼15 m). After ice-out, fish ascended into shallow waters (∼5 m), responding to increased water temperature and possibly to greater foraging opportunity. When surface water temperatures exceeded 20°C, fish descended below the developing thermocline (∼9 m), where they remained until surface temperatures fell below 20°C; fish then ascended into shallower depths, presumably for feeding and spawning. Through the winter, fish remained in thermal habitats that were warmer than the surface temperatures; in the summer, they selected depths with thermal habitats below 15°C. Though the amplitude varied greatly across seasons, lake whitefish displayed a strong diurnal pattern of activity as measured by vertical velocities. Fish were twofold more active during spring, summer, and fall than during winter. Lake whitefish exhibited diel vertical migrations, rising in the water column during nighttime and occupying deeper waters during the day. This pattern was more pronounced in the spring and fall and far less prominent during winter and summer. The strong linkage between temperature and habitat use may limit the current range of lake whitefish and may be directly impacted by climatic change.

  16. Obstetrician practice patterns and recommendations for physical activity during pregnancy.

    Science.gov (United States)

    Evenson, Kelly R; Pompeii, Lisa A

    2010-09-01

    Many women do not attain minimum American College of Obstetricians and Gynecologists (ACOG) recommendations for physical activity during pregnancy. This study assessed the self-reported practice patterns and recommendations of 384 obstetricians working in Texas through a mailed survey on physical activity during pregnancy. The most common exercise elements routinely collected from pregnant women included types of exercise (81%), history of exercise before pregnancy (79%), and frequency of exercise (76%). Fewer obstetricians collected duration (68%) or intensity (69%) of exercise. The percentage of obstetricians recommending avoidance of nine household activities and exercises (including lifting groceries, starting a new exercise program, or participating in walking, jogging, or bicycling) was significantly higher with each successive trimester. Most obstetricians agreed that pregnant women would gain some benefit from mild exercise (99.5%), but fewer agreed that moderate (74%) or vigorous exercise (6%) would be beneficial. Sixty-two percent of obstetricians reported that women who have never exercised could begin an exercise program during pregnancy. Almost all participants agreed that physical activity might make a woman feel more energetic (98%) and improve her labor and delivery (89%), but fewer agreed that exercise during pregnancy causes lower weight babies (23%) or could trigger labor (18%). Dissemination of current recommendations and discussion about the benefits and risks of physical activity during pregnancy, such as through continuing education, appear warranted. Future research could address the causes of disparities between self-reported practice patterns and current ACOG guidelines.

  17. Symmetry-enthalpy correlations in Diels-Alder reactions.

    Science.gov (United States)

    Tuvi-Arad, Inbal; Avnir, David

    2012-08-06

    Woodward-Hoffmann (WH) rules provide strict symmetry selection rules: when they are obeyed, a reaction proceeds; when they are not obeyed, there is no reaction. However, the voluminous experimental literature provides ample evidence that strict compliance to symmetry requirements is not an obstacle for a concerted reaction to proceed, and therefore the idea has developed that it is enough to have a certain degree of the required symmetry to have reactivity. Here we provide quantitative evidence of that link, and show that as one deviates from the desired symmetry, the enthalpy of activation increases, that is, we show that concerted reactions slow down the further they are from the ideal symmetry. Specifically, we study the deviation from mirror symmetry (evaluated with the continuous symmetry measure (CSM)) of the [4+2] carbon skeleton of the transition state of a series of twelve Diels-Alder reactions in seven different solvents (and in the gas phase), in which the dienes are butadiene, cyclopentadiene, cyclohexadiene, and cycloheptadiene; the dienophiles are the 1-, 1,1-, and 1,1,2-cyanoethylene derivatives; the solvents were chosen to sample a range of dielectric constants from heptane to ethanol. These components provide twenty-four symmetry-enthalpy DFT-calculated correlation lines (out of which only one case is a relatively mild exception) that show the general trend of increase in enthalpy as symmetry decreases. The various combinations between the dienophiles, cyanoethylenes, and solvents provide all kinds of sources for symmetry deviations; it is therefore remarkable that although the enthalpy of activation is dictated by various parameters, symmetry emerges as a primary parameter. In our analysis we also bisected this overall picture into solvent effects and geometry variation effects to evaluate under which conditions the electronic effects are more dominant than symmetry effects.

  18. Retrieving binary answers using whole-brain activity pattern classification

    Directory of Open Access Journals (Sweden)

    Norberto Eiji Nawa

    2015-12-01

    Full Text Available Multivariate pattern analysis (MVPA has been successfully employed to advance our understanding of where and how information regarding different mental states is represented in the human brain, bringing new insights into how these states come to fruition, and providing a promising complement to the mass-univariate approach. Here, we employed MVPA to classify whole-brain activity patterns occurring in single fMRI scans, in order to retrieve binary answers from experiment participants. Five healthy volunteers performed two types of mental task while in the MRI scanner: counting down numbers and recalling positive autobiographical events. Data from these runs were used to train individual machine learning based classifiers that predicted which mental task was being performed based on the voxel-based brain activity patterns. On a different day, the same volunteers reentered the scanner and listened to six statements (e.g., the month you were born is an odd number, and were told to countdown numbers if the statement was true (yes or recall positive events otherwise (no. The previously trained classifiers were then used to assign labels (yes/no to the scans collected during the 24-second response periods following each one of the statements. Mean classification accuracies at the single scan level were in the range of 73.6% to 80.8%, significantly above chance for all participants. When applying a majority vote on the scans within each response period, i.e., the most frequent label (yes/no in the response period becomes the answer to the previous statement, 5.0 to 5.8 sentences, out of 6, were correctly classified in each one of the runs, on average. These results indicate that binary answers can be retrieved from whole-brain activity patterns, suggesting that MVPA provides an alternative way to establish basic communication with unresponsive patients when other techniques are not successful.

  19. Automatic Camera Calibration Using Active Displays of a Virtual Pattern.

    Science.gov (United States)

    Tan, Lei; Wang, Yaonan; Yu, Hongshan; Zhu, Jiang

    2017-03-27

    Camera calibration plays a critical role in 3D computer vision tasks. The most commonly used calibration method utilizes a planar checkerboard and can be done nearly fully automatically. However, it requires the user to move either the camera or the checkerboard during the capture step. This manual operation is time consuming and makes the calibration results unstable. In order to solve the above problems caused by manual operation, this paper presents a full-automatic camera calibration method using a virtual pattern instead of a physical one. The virtual pattern is actively transformed and displayed on a screen so that the control points of the pattern can be uniformly observed in the camera view. The proposed method estimates the camera parameters from point correspondences between 2D image points and the virtual pattern. The camera and the screen are fixed during the whole process; therefore, the proposed method does not require any manual operations. Performance of the proposed method is evaluated through experiments on both synthetic and real data. Experimental results show that the proposed method can achieve stable results and its accuracy is comparable to the standard method by Zhang.

  20. Subdaily evapotranspiration rate calculation from streamflow summer diel signal

    Science.gov (United States)

    Gribovszki, Z.; Kalicz, P.; Szilágyi, J.

    2009-04-01

    Diel signal of hydrological variables (e.g., shallow groundwater level or streamflow rate) are rarely investigated in the hydrologic literature although these short-term fluctuations may incorporate useful information for the characterization of hydro-ecological systems. Riparian vegetation (especially forest) typically has a great influence on groundwater level and groundwater-sustained baseflow, therefore calculation of the correct evapotranspiration rates is very important for natural protection tasks and water resources management. Recently a new technique was developed by us to calculate daily or even subdaily evapotranspiration rates from groundwater-level measurements, and that method now is modified to estimate evapotranspiration rates from the baseflow diel signal only. The method was successfully tested with hydro-meteorological data from the Hidegvíz Valley experimental catchment in the Sopron Hills at the western border of Hungary. The evapotranspiration rates calculated from the groundwater signal only, are typically (a magnitude) higher than those obtained with an already existing method. With the application of our new technique exploiting the baseflow diel signal of the stream, evapotranspiration rates, very similar to those gained from groundwater level readings and the Penman-Monteith equation, can be obtained. Keywords: baseflow diel signal, evapotranspiration, riparian zone

  1. High stereoselectivity on low temperature Diels-Alder reactions

    Directory of Open Access Journals (Sweden)

    Invernize Paulo

    2005-12-01

    Full Text Available Abstract We have found that some of the usually poor dienophiles (2-cycloenones can undergo Diels-Alder reaction at -78°C with unusually high stereoselectivity in the presence of niobium pentachloride as a Lewis acid catalyst. A remarkable difference in reaction rates for unsubstituted and α- or β-methyl substituted 2-cycloenones was also observed.

  2. Interpreting diel hysteresis between soil respiration and temperature

    Science.gov (United States)

    C. Phillips; N. Nickerson; D. Risk; B.J. Bond

    2011-01-01

    Increasing use of automated soil respiration chambers in recent years has demonstrated complex diel relationships between soil respiration and temperature that are not apparent from less frequent measurements. Soil surface flux is often lagged from soil temperature by several hours, which results in semielliptical hysteresis loops when surface flux is plotted as a...

  3. Diels-Alder reactions of anthracenes with C-sulfonyldithioformates

    DEFF Research Database (Denmark)

    El-Sayed, I.; Ali, O.M.; Fischer, A.

    2003-01-01

    C-Sulfonyldithioformates (2) (R-1 = ArSO2, R 2 = ArS) readily add to anthracene and 9-methylanthracene (1) in a Diels-Alder fashion with formation of 9,10-dihydro-10,9-(epithiomethano)anthracenes (3) which in turn may suffer thermally induced elimination of arenesulfinic acid to yield the 9...

  4. Intramolecular inverse electron demand Diels-Alder reactions of pyrimidines.

    NARCIS (Netherlands)

    Frissen, A.E.

    1990-01-01

    This thesis deals with the intramolecular inverse electron demand Diels-Alder reaction of pyrimidines. The main objective of the study was to investigate the synthetic applicability of this reaction and to get more insight in the electronic and steric effects which determine the reactivity of compou

  5. Control of programmed cell death by distinct electrical activity patterns.

    Science.gov (United States)

    Golbs, Antje; Nimmervoll, Birgit; Sun, Jyh-Jang; Sava, Irina E; Luhmann, Heiko J

    2011-05-01

    Electrical activity and sufficient supply with survival factors play a major role in the control of apoptosis in the developing cortex. Coherent high-frequency neuronal activity, which efficiently releases neurotrophins, is essential for the survival of immature neurons. We studied the influence of neuronal activity on apoptosis in the developing cortex. Dissociated cultures of the newborn mouse cerebral cortex were grown on multielectrode arrays to determine the activity patterns that promote neuronal survival. Cultures were transfected with a plasmid coding for a caspase-3-sensitive fluorescent protein allowing real-time analysis of caspase-3-dependent apoptosis in individual neurons. Elevated extracellular potassium concentrations (5 and 8 mM), application of 4-aminopyridine or the γ-aminobutyric acid-A receptor antagonist Gabazine induced a shift in the frequency distribution of activity toward high-frequency bursts. Under these conditions, a reduction or delay in caspase-3 activation and an overall increase in neuronal survival could be observed. This effect was dependent on the activity of phosphatidylinositol-3 kinase, as blockade of this enzyme abolished the survival-promoting effect of high extracellular potassium concentrations. Our data indicate that increased network activity can prevent apoptosis in developing cortical neurons.

  6. a Multidisciplinary Analytical Framework for Studying Active Mobility Patterns

    Science.gov (United States)

    Orellana, D.; Hermida, C.; Osorio, P.

    2016-06-01

    Intermediate cities are urged to change and adapt their mobility systems from a high energy-demanding motorized model to a sustainable low-motorized model. In order to accomplish such a model, city administrations need to better understand active mobility patterns and their links to socio-demographic and cultural aspects of the population. During the last decade, researchers have demonstrated the potential of geo-location technologies and mobile devices to gather massive amounts of data for mobility studies. However, the analysis and interpretation of this data has been carried out by specialized research groups with relatively narrow approaches from different disciplines. Consequently, broader questions remain less explored, mainly those relating to spatial behaviour of individuals and populations with their geographic environment and the motivations and perceptions shaping such behaviour. Understanding sustainable mobility and exploring new research paths require an interdisciplinary approach given the complex nature of mobility systems and their social, economic and environmental impacts. Here, we introduce the elements for a multidisciplinary analytical framework for studying active mobility patterns comprised of three components: a) Methodological, b) Behavioural, and c) Perceptual. We demonstrate the applicability of the framework by analysing mobility patterns of cyclists and pedestrians in an intermediate city integrating a range of techniques, including: GPS tracking, spatial analysis, auto-ethnography, and perceptual mapping. The results demonstrated the existence of non-evident spatial behaviours and how perceptual features affect mobility. This knowledge is useful for developing policies and practices for sustainable mobility planning.

  7. Environmental influences on activity patterns in altered states of consciousness.

    Science.gov (United States)

    De Weer, A-S; Da Ros, M; Berré, J; Mélot, C; Goldman, S; Peigneux, P

    2011-12-01

    To evaluate in disorders of consciousness (DOC) circadian variations in motor patterns and their possible synchronization with physiologically regulated light variations and/or a social environmental factor, i.e. presence and actions of other persons. Actimetric and ambient light levels recordings were obtained during 4-9 days in two patients with traumatic brain injury (TB1 and TB2) in a minimally conscious state (MCS), one MCS (AI1) and one comatose (AI2) anoxic-ischaemic patients. Environmental changes were automatically recorded using a video system. Minute light variations correlated with motor activity in all patients. However, motor activity was significantly higher during day than nighttime and correlated with social environmental changes, in patients TB1 and TB2 only. Night-day circadian variations in motor activity patterns and influence of social stimulations were observed in traumatic MCS patients only. Nonetheless, rapid light variations may temporarily promote increased arousal, and consequently motor activity, in all DOCs. © 2011 The Author(s). European Journal of Neurology © 2011 EFNS.

  8. Habitat Selection and Activity Pattern of GPS Collared Sumateran Tigers

    Directory of Open Access Journals (Sweden)

    Dolly Priatna

    2012-12-01

    Full Text Available Although translocation has been used in mitigating human-carnivore conflict for decades, few studies have been conducted on the behavioral ecology of released animals. Such information is necessary in the context of sustainable forest management. In this study we determine the type of land cover used as main habitat and examine the activity pattern of translocated tigers. Between 2008 and 2010 we captured six conflict tigers and translocated them 74-1,350 km from their capture sites in Sumatera. All tigers were fitted with global positioning system (GPS collars. The collars were set to fix 24-48 location coordinates per day.  All translocated tigers showed a preference for a certain habitat type within their new home range, and tended to select the majority of natural land cover type within the landscape as their main habitat, but the availability of natural forest habitat within the landscape remains essensial for their survival. The activity of male translocated tigers differed significantly between the six time intervals of 24 hours, and their most active periods were in the afternoon (14:00-18:00 hours and in the evening (18:00-22:00 hours. Despite being preliminary, the findings of this study-which was the first such study conducted in Sumatera-highlight the conservation value of tiger translocation and provide valuable information for improving future management of conflict tigers.Keywords: activity pattern, GPS collars, habitat selection, sumateran tiger, translocation

  9. Diel cycles in dissolved barium, lead, iron, vanadium, and nitrite in a stream draining a former zinc smelter site near Hegeler, Illinois

    Science.gov (United States)

    Kay, R.T.; Groschen, G.E.; Cygan, G.; Dupre, David H.

    2011-01-01

    Diel variations in the concentrations of a number of constituents have the potential to substantially affect the appropriate sampling regimen in acidic streams. Samples taken once during the course of the day cannot adequately reflect diel variations in water quality and may result in an inaccurate understanding of biogeochemical processes, ecological conditions, and of the threat posed by the water to human health and the associated wildlife. Surface water and groundwater affected by acid drainage were sampled every 60 to 90. min over a 48-hour period at a former zinc smelter known as the Hegeler Zinc Superfund Site, near Hegeler, Illinois. Diel variations related to water quality in the aquifer were not observed in groundwater. Diel variations were observed in the temperature, pH, and concentration of dissolved oxygen, nitrite, barium, iron, lead, vanadium, and possibly uranium in surface water. Temperature, dissolved oxygen, nitrite, barium, lead, and uranium generally attained maximum values during the afternoon and minimum values during the night. Iron, vanadium, and pH generally attained minimum values during the afternoon and maximum values during the night. Concentrations of dissolved oxygen were affected by the intensity of photosynthetic activity and respiration, which are dependent upon insolation. Nitrite, an intermediary in many nitrogen reactions, may have been formed by the oxidation of ammonium by dissolved oxygen and converted to other nitrogen species as part of the decomposition of organic matter. The timing of the pH cycles was distinctly different from the cycles found in Midwestern alkaline streams and likely was the result of the photoreduction of Fe3+ to Fe 2+ and variations in the intensity of precipitation of hydrous ferric oxide minerals. Diel cycles of iron and vanadium also were primarily the result of variations in the intensity of precipitation of hydrous ferric oxide minerals. The diel variation in the concentrations of lead, uranium

  10. On the emergence of diel solute signals in flowing waters

    Science.gov (United States)

    Hensley, Robert T.; Cohen, Matthew J.

    2016-02-01

    Biota imprint their stoichiometry on relative rates of elemental cycling in the environment. Despite this coupling, producer-driven diel solute variation in rivers and streams is more apparent for some solutes (e.g., dissolved oxygen—DO) than others (e.g., nitrate—NO3-). We hypothesized that these differences arise from atmospheric equilibration, with signals emerging and evolving differently for gaseous and nongaseous solutes. Measurements of DO and NO3 in a spring-fed river, where constant inputs isolate in-stream processing, support this hypothesis, as do results from reactive transport modeling of river solute dynamics. Atmospheric equilibration dramatically shortens the benthic footprint over which signals integrate, facilitating emergence of diel DO signals in response to in-stream metabolism. In contrast, upstream influences persist much further downstream for nongaseous solutes, confounding and potentially obscuring the diel signals from in-stream assimilatory processing. Isolating diel NO3 signals from in-stream processing requires a two-station approach wherein metabolic impacts on solute variation are measured by difference between upstream and downstream sensors. Notably, two-station inference improves markedly when hydraulic controls on signal propagation such as dispersion and storage are explicitly considered. We conclude that the absence of diel signals at a single station for nongaseous solutes such as NO3- cannot be interpreted as lack of autotroph demand or element coupling. As advances in sensors enable the acquisition of an increasingly rich array of solute signals, controlling for differences in the emergence and downstream evolution of gaseous versus nongaseous solutes will dramatically improve inferences regarding the timing and magnitude of coupled elemental processing.

  11. The concentration of criminal victimization and patterns of routine activities.

    Science.gov (United States)

    Kuo, Shih-Ya; Cuvelier, Steven J; Sheu, Chuen-Jim; Zhao, Jihong Solomon

    2012-06-01

    Although many repeat victimization studies have focused on describing the prevalence of the phenomenon, this study attempted to explain variations in the concentration of victimization by applying routine activities as a theoretical model. A multivariate analysis of repeat victimization based on the 2005 Taiwan criminal victimization data supported the general applicability of the routine activity model developed in Western culture for predicting repeat victimization. Findings that diverged from Western patterns included family income to assault, gender to robbery, and marital status, family income, and major activity to larceny incidents. These disparities illustrated the importance of considering the broader sociocultural context in the association between risk predictors and the concentration of criminal victimization. The contradictory results and nonsignificant variance also reflected untapped information on respondents' biological features and psychological tendencies. Future victimization research would do well to integrate measurements that are sensitive to salient sociocultural elements of the society being studied and individuals' biological and psychological traits.

  12. Active ultrasound pattern injection system (AUSPIS for interventional tool guidance.

    Directory of Open Access Journals (Sweden)

    Xiaoyu Guo

    Full Text Available Accurate tool tracking is a crucial task that directly affects the safety and effectiveness of many interventional medical procedures. Compared to CT and MRI, ultrasound-based tool tracking has many advantages, including low cost, safety, mobility and ease of use. However, surgical tools are poorly visualized in conventional ultrasound images, thus preventing effective tool tracking and guidance. Existing tracking methods have not yet provided a solution that effectively solves the tool visualization and mid-plane localization accuracy problem and fully meets the clinical requirements. In this paper, we present an active ultrasound tracking and guiding system for interventional tools. The main principle of this system is to establish a bi-directional ultrasound communication between the interventional tool and US imaging machine within the tissue. This method enables the interventional tool to generate an active ultrasound field over the original imaging ultrasound signals. By controlling the timing and amplitude of the active ultrasound field, a virtual pattern can be directly injected into the US machine B mode display. In this work, we introduce the time and frequency modulation, mid-plane detection, and arbitrary pattern injection methods. The implementation of these methods further improves the target visualization and guiding accuracy, and expands the system application beyond simple tool tracking. We performed ex vitro and in vivo experiments, showing significant improvements of tool visualization and accurate localization using different US imaging platforms. An ultrasound image mid-plane detection accuracy of ±0.3 mm and a detectable tissue depth over 8.5 cm was achieved in the experiment. The system performance is tested under different configurations and system parameters. We also report the first experiment of arbitrary pattern injection to the B mode image and its application in accurate tool tracking.

  13. Active ultrasound pattern injection system (AUSPIS) for interventional tool guidance.

    Science.gov (United States)

    Guo, Xiaoyu; Kang, Hyun-Jae; Etienne-Cummings, Ralph; Boctor, Emad M

    2014-01-01

    Accurate tool tracking is a crucial task that directly affects the safety and effectiveness of many interventional medical procedures. Compared to CT and MRI, ultrasound-based tool tracking has many advantages, including low cost, safety, mobility and ease of use. However, surgical tools are poorly visualized in conventional ultrasound images, thus preventing effective tool tracking and guidance. Existing tracking methods have not yet provided a solution that effectively solves the tool visualization and mid-plane localization accuracy problem and fully meets the clinical requirements. In this paper, we present an active ultrasound tracking and guiding system for interventional tools. The main principle of this system is to establish a bi-directional ultrasound communication between the interventional tool and US imaging machine within the tissue. This method enables the interventional tool to generate an active ultrasound field over the original imaging ultrasound signals. By controlling the timing and amplitude of the active ultrasound field, a virtual pattern can be directly injected into the US machine B mode display. In this work, we introduce the time and frequency modulation, mid-plane detection, and arbitrary pattern injection methods. The implementation of these methods further improves the target visualization and guiding accuracy, and expands the system application beyond simple tool tracking. We performed ex vitro and in vivo experiments, showing significant improvements of tool visualization and accurate localization using different US imaging platforms. An ultrasound image mid-plane detection accuracy of ±0.3 mm and a detectable tissue depth over 8.5 cm was achieved in the experiment. The system performance is tested under different configurations and system parameters. We also report the first experiment of arbitrary pattern injection to the B mode image and its application in accurate tool tracking.

  14. Circadian patterns of Wikipedia editorial activity: a demographic analysis.

    Directory of Open Access Journals (Sweden)

    Taha Yasseri

    Full Text Available Wikipedia (WP as a collaborative, dynamical system of humans is an appropriate subject of social studies. Each single action of the members of this society, i.e., editors, is well recorded and accessible. Using the cumulative data of 34 Wikipedias in different languages, we try to characterize and find the universalities and differences in temporal activity patterns of editors. Based on this data, we estimate the geographical distribution of editors for each WP in the globe. Furthermore we also clarify the differences among different groups of WPs, which originate in the variance of cultural and social features of the communities of editors.

  15. Circadian patterns of Wikipedia editorial activity: A demographic analysis

    CERN Document Server

    Yasseri, Taha; Kerétsz, János

    2011-01-01

    Wikipedia (WP) as a collaborative, dynamical system of humans is an appropriate subject of social studies. Each single action of the members of this society, i.e. editors, is well recorded and accessible. Using the cumulative data of 34 Wikipedias in different languages, we try to characterize and find the universalities and differences in temporal activity patterns of editors. Based on this data, we estimate the geographical distribution of editors for each WP in the globe. Furthermore we also clarify the differences among different groups of WPs, which originate in the variance of cultural and social features of the communities of editors.

  16. Pattern matching based active optical sorting of colloids/cells

    Science.gov (United States)

    Verma, R. S.; Dasgupta, R.; Ahlawat, S.; Kumar, N.; Uppal, A.; Gupta, P. K.

    2013-08-01

    We report active optical sorting of colloids/cells by employing a cross correlation based pattern matching technique for selection of the desired objects and thereafter sorting using dynamically controllable holographic optical traps. The problem of possible collision between the different sets of objects during sorting was avoided by raising one set of particles to a different plane. We also present the results obtained on using this approach for some representative applications such as sorting of silica particles of two different sizes, of closely packed colloids and of white blood cells and red blood cells from a mixture of the two.

  17. Atrial natriuretic peptide and feeding activity patterns in rats

    Directory of Open Access Journals (Sweden)

    Oliveira M.H.A.

    1997-01-01

    Full Text Available This review presents historical data about atrial natriuretic peptide (ANP from its discovery as an atrial natriuretic factor (ANF to its role as an atrial natriuretic hormone (ANH. As a hormone, ANP can interact with the hypothalamic-pituitary-adrenal axis (HPA-A and is related to feeding activity patterns in the rat. Food restriction proved to be an interesting model to investigate this relationship. The role of ANP must be understood within a context of peripheral and central interactions involving different peptides and pathways

  18. Sedentary and Physical Activity Patterns in Adults with Intellectual Disability

    Directory of Open Access Journals (Sweden)

    Guillermo R. Oviedo

    2017-09-01

    Full Text Available Little is known about the patterns of sedentary time (ST and physical activity (PA levels throughout the week among adults and older adults with Intellectual Disability (ID. We analyzed ST and PA patterns of adults and older adults with ID. Forty-two adults and 42 older adults with mild to severe ID participated in this study. Height and weight were obtained to calculate Body Mass Index (BMI. Body fat and fat-free mass percentages were also obtained. Patterns of PA levels and ST were assessed with GT3X Actigraph accelerometers. Adults performed higher amounts of total PA and moderate to vigorous PA than older adults during the week, on weekdays and in center time (all p > 0.05. No differences between males and females were found for either PA levels or ST. Only 10.7% of the participants met the global recommendations on PA for health. The participants of the current study showed low PA levels and a high prevalence of ST. Interestingly, when comparing age and/or sex groups, no differences were observed for ST. Our findings provide novel and valuable information to be considered in future interventions aiming to increase PA levels and reduce ST.

  19. Toward a taxonomy of autonomic sleep patterns with electrodermal activity.

    Science.gov (United States)

    Sano, Akane; Picard, Rosalind W

    2011-01-01

    This paper presents a first version of a taxonomy of automatic sleep patterns found with the Affectiva Q™ Sensor, a wireless, logging biosensor that measures skin conductance, skin temperature, and motion comfortably from the wrist. Several studies have examined electrodermal activity (EDA) during sleep, but they focused on an analysis of EDA for only a small number of nights. We quantitatively analyzed EDA during sleep in three study situations: (1) Comparing EDA with polysomnography (PSG) from seven subjects in a sleep lab, (2) Characterizing multiple nights of EDA in a sleep lab, in a hospital and at home from 24 subjects, and (3) Gathering long-term EDA (30-60 nights) patterns from three subjects during home sleep. After gathering this rich corpus of data, we characterized inter- and intra-individual differences of EDA features and the relation of EDA peaks to subjective sleep quality. Here we present results from the three studies in an effort to begin to characterize autonomic patterns found in natural sleep.

  20. Cortical Activity Patterns in ADHD during Arousal, Activation and Sustained Attention

    Science.gov (United States)

    Loo, Sandra K.; Hale, T. Sigi; Macion, James; Hanada, Grant; McGough, James J.; McCracken, James T.; Smalley, Susan L.

    2009-01-01

    Objective: The goal of the present study is to test whether there are Attention-Deficit Hyperactivity Disorder (ADHD)-related differences in brain electrical activity patterns across arousal, activation and vigilance states. Method: The sample consists of 80 adults (38 with ADHD and 42 non-ADHD controls) who were recruited for a family study on…

  1. Turing Patterns in Estuarine Sediments by Microbiological Activity

    Science.gov (United States)

    De Morais Mendonca Teles, Antonio

    2016-07-01

    The use of Turing mechanisms and lattice Lotka-Volterra model (LLV), also by means of the non-extensive statistical mechanics, can mathematically describe well the phenomena of clustering and their associated boundaries with fractal dimensionality, which occurs in various natural situations, among them, biogeochemical processes via microorganisms in estuarine and marine sediments on the planet Earth. The author did an experimental analysis in field work which took into account the spatial and temporal behavior of Turing patterns, in the form of microbial activity within estuarine subsurface sediments. We show we can find the characteristics of clustering and fractallity which are present in the dynamical LLV model and Turing patterns mechanisms, and the non-extensive statistical mechanics could be used to find the q-entropy (Sq), and other non-equilibrium statistical parameters of the studied estuarine (Caraís lagoon) subsurface biogeochemical system. In this paper, the author suggests that such kinds of subsurface ecological systems are of interest to Astrobiology because if we find Turing-type clustered geomorphological patterns, below meter scale, on the near subsurface and inside rocks at the surface of planet Mars, and also find non-equilibrium statistical parameters (temperature, [F], [C], [S], etc.), displaying Turing-type mechanism, in the aquatic environments of the internal seas of planets Jupiter's moon Europa and the internal global ocean of Saturn's moon Enceladus, that could mean that possible hypothetical biogeochemical activities are present in such places. This could be a bio-indicator tool. And with further studies we could find the q-entropy Sq to establish better defined statistical mechanical parameters for such environments and to refine models for their evolution, as we do on planet Earth.

  2. Physical Activity Patterns in the Elderly Kashan Population

    Science.gov (United States)

    Sadrollahi, Ali; Hosseinian, Masoumeh; Masoudi Alavi, Negin; Khalili, Zahra; Esalatmanesh, Sophia

    2016-01-01

    Kashan. The pattern of physical activity in the elderly depends on their lifestyle. A promotion of active lifestyles should be a part of health care planning for the elderly. PMID:27621923

  3. Zooplankton diel vertical migration and influence of upwelling on the biomass in the Chukchi Sea during summer

    Institute of Scientific and Technical Information of China (English)

    WANG Huiwu; CHEN Hongxia; XUE Liang; LIU Na; LIU Yanliang

    2015-01-01

    The diel vertical migration (DVM) of zooplankton and the influence of upwelling on zooplankton biomass were examined using water column data of current velocity and mean volume backscattering strength (MVBS) collected by moored acoustic Doppler current profilers (ADCPs) deployed in the southeastern Chukchi Sea during the 5th Chinese National Arctic Research Expedition (CHINARE) in summer 2012, combined with the satellite observational data such as sea surface temperature (SST), wind, and chlorophylla (Chla). Hourly acoustic data were continuously collected for 49-d in the mooring site. Spectral analysis indicated that there were different migrating patterns of zooplankton, even though precisely classifying the zooplankton taxa was not available. The prevailing 24-h cycle corresponded to the normal DVM with zooplankton swimming upwards at sunrise and returning to deep waters at sunset. There was a clear DVM in the upper 17 m of the water column during the period with distinct day-night cycles, and no active DVM throughout the water column when the sun above the horizon (polar day), suggesting that light intensity was the trigger for DVM. Also there was a second migrating pattern with 12-h cycle. The upwelling event occurring in the northwest of Alaskan coastal area had important influence on zooplankton biomass at the mooring site. During the upwelling, the SST close to the mooring site dropped significantly from maximal 6.35℃ to minimal 1.31℃ within five days. Simultaneously, there was a rapid increase in the MVBS and Chla level, suggesting the aggregation of zooplankton related to upwelling.

  4. PATTERNS OF ACTIVITY IN A GLOBAL MODEL OF A SOLAR ACTIVE REGION

    Energy Technology Data Exchange (ETDEWEB)

    Bradshaw, S. J. [Department of Physics and Astronomy, Rice University, Houston, TX 77005 (United States); Viall, N. M., E-mail: stephen.bradshaw@rice.edu, E-mail: Nicholeen.M.Viall@nasa.gov [NASA Goddard Space Flight Center, Greenbelt, MD 20771 (United States)

    2016-04-10

    In this work we investigate the global activity patterns predicted from a model active region heated by distributions of nanoflares that have a range of frequencies. What differs is the average frequency of the distributions. The activity patterns are manifested in time lag maps of narrow-band instrument channel pairs. We combine hydrodynamic and forward modeling codes with a magnetic field extrapolation to create a model active region and apply the time lag method to synthetic observations. Our aim is not to reproduce a particular set of observations in detail, but to recover some typical properties and patterns observed in active regions. Our key findings are the following. (1) Cooling dominates the time lag signature and the time lags between the channel pairs are generally consistent with observed values. (2) Shorter coronal loops in the core cool more quickly than longer loops at the periphery. (3) All channel pairs show zero time lag when the line of sight passes through coronal loop footpoints. (4) There is strong evidence that plasma must be re-energized on a timescale comparable to the cooling timescale to reproduce the observed coronal activity, but it is likely that a relatively broad spectrum of heating frequencies are operating across active regions. (5) Due to their highly dynamic nature, we find nanoflare trains produce zero time lags along entire flux tubes in our model active region that are seen between the same channel pairs in observed active regions.

  5. Seasonal changes in partial, reverse diel vertical migrations of cisco Coregonus artedi.

    Science.gov (United States)

    Ahrenstorff, T D; Hrabik, T R

    2016-09-01

    The objectives of this study were to (1) document changes in partial, reverse diel vertical migrations (DVM) patterns of cisco Coregonus artedi in Ten Mile Lake, MN, U.S.A., throughout the year and (2) evaluate the mechanisms that may cause shifts in migration behaviour. Results indicated that C. artedi vertical distributions remained deep in the water column during the day and night of the spring and autumn, which was related to a low risk, low reward strategy. During summer, a partial migration occurred where a portion of the population remained deeper according to the low risk, low reward strategy, while the other portion performed a more extensive high risk, high reward reverse DVM. In winter, C. artedi did not migrate because there were only low risk, low reward conditions present at all depths. The extensive partial, reverse DVM during summer probably increased the growth potential of C. artedi, helping individuals survive in a lake with low zooplankton prey resources.

  6. Muscular activation patterns of the bow arm in recurve archery.

    Science.gov (United States)

    Ertan, Hayri

    2009-05-01

    In archery shooting, the archer should hold the bow in place using only the pressure produced through drawing back the bowstring. Most coaches discourage the archer from gripping the bow as this is believed to produce a sideways deflecting torque on the bow and arrow during the release. The purpose of this study was to compare the bow hand forearm muscular activation patterns of elite archers with beginners to define the muscular contraction-relaxation strategies in the bow hand forearm muscles during archery shooting and investigate the effects of performance level on these strategies. Electromyographic activity of the M. flexor digitorum superficialis and the M. extensor digitorum of 10 elite and 10 beginner archers were recorded together with a pulse synchronized with the clicker snap. Raw electromyographic records as 1s before and after the clicker pulse were rectified, integrated, and normalized. The data was then averaged for successive shots of each subject and later for both groups of archers. The main difference between the elite and beginner archers was that the elite archers had a greater activation of the M. extensor digitorum, which indicates that they avoid gripping the bow-handle not only relaxing the flexor muscles, but also contracting the extensor muscle groups. This muscular contraction strategy secures the archer to not interfere with the forward movement of the bow, which is the forward acceleration of the bow caused by the pushing power of the bowstring.

  7. Relative humidity and activity patterns of Ixodes scapularis (Acari: Ixodidae)

    Science.gov (United States)

    Berger, K.A.; Ginsberg, Howard S.; Gonzalez, L.; Mather, T.N.

    2014-01-01

    Laboratory studies have shown clear relationships between relative humidity (RH) and the activity and survival of Ixodes scapularis Say (blacklegged tick). However, field studies have produced conflicting results. We examined this relationship using weekly tick count totals and hourly RH observations at three field sites, stratified by latitude, within the state of Rhode Island. Records of nymphal tick abundance were compared with several RH-related variables (e.g., RH at time of sampling and mean weekly daytime RH). In total, 825 nymphs were sampled in 2009, a year of greater precipitation, with a weighted average leaf litter RH recorded at time of sampling of 85.22%. Alternatively, 649 nymphs were collected in 2010, a year of relatively low precipitation, and a weighted average RH recorded at time of sampling was 75.51%. Negative binomial regression analysis of tick count totals identified cumulative hours <82% RH threshold as a significant factor observed in both years (2009: P = 0.0037; 2010: P < 0.0001). Mean weekly daytime RH did not significantly predict tick activity in either year. However, mean weekly daytime RH recorded with 1-wk lag before sample date was a significant variable (P = 0.0016) in 2010. These results suggest a lag effect between moisture availability and patterns of tick activity and abundance. Differences in the relative importance of each RH variable between years may have been due to abnormally wet summer conditions in 2009.

  8. Microenvironmental time-activity patterns in Chongqing, China

    Institute of Scientific and Technical Information of China (English)

    Yu ZHAO; Shuxiao WANG; Gangcai CHEN; Fei WANG; Kristin AUNAN; Jiming HAO

    2009-01-01

    An investigation using recall questionnaires was conducted in winter and autumn 2006 to evaluate the time-activity patterns in Chongqing, China. The average time spent in seven microenvironments (MEs) including outdoors, transit, living room, bedroom, kitchen, classroom/office, and other indoors were found to be about 3.5,1.1, 2.5, 9.7, 1.4, 4.2, and 1.7 h per day, respectively.According to the results of a nonparametric test, the sampling period and day of week were significant for the variation of the time spent in all MEs except for transit and outdoors. The time budget was analyzed using a general linear model (GLM), which exhibited significant variability by demographic factors such as gender, age,residence, education, and household income.

  9. Guiding catalytically active particles with chemically patterned surfaces

    CERN Document Server

    Uspal, W E; Dietrich, S; Tasinkevych, M

    2016-01-01

    Catalytically active Janus particles suspended in solution create gradients in the chemical composition of the solution along their surfaces, as well as along any nearby container walls. The former leads to self-phoresis, while the latter gives rise to chemi-osmosis, providing an additional contribution to self-motility. Chemi-osmosis strongly depends on the molecular interactions between the diffusing chemical species and the wall. We show analytically, using an approximate "point-particle" approach, that by chemically patterning a planar substrate one can direct the motion of Janus particles: the induced chemi-osmotic flows can cause particles to either "dock" at the chemical step between the two materials, or to follow a chemical stripe. These theoretical predictions are confirmed by full numerical calculations. Generically, docking occurs for particles which tend to move away from their catalytic caps, while stripe-following occurs in the opposite case. Our analysis reveals the physical mechanisms governi...

  10. AFSC/ABL: Gulf of Alaska Diel Trawl Survey, 2005-2006

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Diel epipelagic sampling for juvenile Pacific salmon (Oncorhynchus spp.), rockfish (Sebastes spp.), sablefish (Anoplopoma fimbria), and associated species was...

  11. Repeating Patterns in Kindergarten: Findings from Children's Enactments of Two Activities

    Science.gov (United States)

    Tsamir, Pessia; Tirosh, Dina; Levenson, Esther S.; Barkai, Ruthi; Tabach, Michal

    2017-01-01

    This paper describes kindergarten children's engagement with two patterning activities. The first activity includes two tasks in which children are asked to choose possible ways for extending two different repeating patterns and the second activity calls for comparing different pairs of repeating patterns. Children's recognition of the unit of…

  12. How Situational Context Impacts Empathic Responses and Brain Activation Patterns.

    Science.gov (United States)

    Cheng, Yawei; Chen, Chenyi; Decety, Jean

    2017-01-01

    Clinical empathy, which is defined as the ability to understand the patient's experience and feelings from the patient's perspective, is acknowledged to be an important aspect of quality healthcare. However, how work experience modulates the empathic responses and brain activation patterns in medical professions remains elusive. This fMRI study recruited one hundred female nurses, who varied the length of work experience, and examined how their neural response, functional connectivity, and subjective evaluations of valence and arousal to perceiving another individual in physical pain are modulated by the situational context in which they occur (i.e., in a hospital or at home). Participants with longer hospital terms evaluated pain as less negative in valence and arousal when occurring in a hospital context, but not in a home context. Physical pain perceived in a hospital compared to a home context produced stronger activity in the right temporoparietal junction (rTPJ). The reverse comparison resulted in an increased activity in the insula and anterior midcingulate cortex (aMCC). Mediation analysis indicated that reduced personal accomplishment, a symptom of burnout, breaks down the mediation effect of the putamen on context-dependent valence ratings. Overall, the study demonstrates how situational contexts significantly influence individuals' empathic processing, and that perceiving reward from patient care protects them from burnout. Highlights -Differences in behavior ratings and brain activations between medical practitioners perceiving others' pain in a hospital and at home.-Situational contexts significantly influence individual's empathic processing.-Perceiving rewards from patient care protects medical practitioners from burnout.-Empathy is a flexible phenomenon.

  13. How Situational Context Impacts Empathic Responses and Brain Activation Patterns

    Directory of Open Access Journals (Sweden)

    Yawei Cheng

    2017-09-01

    Full Text Available Clinical empathy, which is defined as the ability to understand the patient’s experience and feelings from the patient’s perspective, is acknowledged to be an important aspect of quality healthcare. However, how work experience modulates the empathic responses and brain activation patterns in medical professions remains elusive. This fMRI study recruited one hundred female nurses, who varied the length of work experience, and examined how their neural response, functional connectivity, and subjective evaluations of valence and arousal to perceiving another individual in physical pain are modulated by the situational context in which they occur (i.e., in a hospital or at home. Participants with longer hospital terms evaluated pain as less negative in valence and arousal when occurring in a hospital context, but not in a home context. Physical pain perceived in a hospital compared to a home context produced stronger activity in the right temporoparietal junction (rTPJ. The reverse comparison resulted in an increased activity in the insula and anterior midcingulate cortex (aMCC. Mediation analysis indicated that reduced personal accomplishment, a symptom of burnout, breaks down the mediation effect of the putamen on context-dependent valence ratings. Overall, the study demonstrates how situational contexts significantly influence individuals’ empathic processing, and that perceiving reward from patient care protects them from burnout.Highlights-Differences in behavior ratings and brain activations between medical practitioners perceiving others’ pain in a hospital and at home.-Situational contexts significantly influence individual’s empathic processing.-Perceiving rewards from patient care protects medical practitioners from burnout.-Empathy is a flexible phenomenon.

  14. Patterns of adolescents' participation in organized activities: are sports best when combined with other activities?

    Science.gov (United States)

    Linver, Miriam R; Roth, Jodie L; Brooks-Gunn, Jeanne

    2009-03-01

    Although many adolescents participate in sports and other types of organized activities, little extant research explores how youth development outcomes may vary for youth involved in different combinations of activities. The present study uses the Child Development Supplement of the Panel Study of Income Dynamics, a large, nationally representative sample, to compare activity patterns of adolescents ages 10-18 years (n = 1,711). A cluster analytic technique revealed 5 activity clusters: sports-focused, sports plus other activities, primarily school-based activities, primarily religious youth groups, and low activity involvement. Activity patterns were examined in conjunction with 5 categories of youth development outcomes, including competence (e.g., academic ability), confidence (e.g., self-concept of ability), connections (e.g., talking with friends), character (e.g., externalizing behavior problems), and caring (e.g., prosocial behavior). Results showed that those who participated only in sports had more positive outcomes compared with those who had little or no involvement in organized activities, but less positive outcomes compared with those who participated in sports plus other activities.

  15. Obesity and physical activity patterns in children and adolescents.

    Science.gov (United States)

    Laguna, María; Ruiz, Jonatan R; Gallardo, Cristian; García-Pastor, Teresa; Lara, María-Teresa; Aznar, Susana

    2013-11-01

    The aim of this study is to measure objectively and accurately the physical activity (PA) patterns in Spanish children and adolescents according to their obesity status, gender and age groups. A sample of 487 children and 274 adolescents from the European Youth Heart Study participated in the study. The variables measured were anthropometric characteristics (height, weight and body mass index), and PA was measured during 6 consecutive days using the GT1M accelerometer. Three-way analysis of variance (age × gender × obesity status) showed significant differences in the interaction effect in age, gender and obesity status (normal-weight and overweight/obesity) for mean of moderate-to-vigorous PA (MVPA) (P = 0.02) and vigorous PA (VPA) (P = 0.014) within the sample. Nine-year-old normal-weight children achieved significantly (P obesity children. During weekend days, all sample achieved significant more MVPA (P obese) and adolescents (16.4% and 27.3% normal-weight and overweight/obese, respectively) met the current health-related recommendations of 60 min of MVPA daily. It is clear that activity levels are insufficient for all children, in particular overweight/obese children and adolescents, although the precise nature of the relationship appears to differ between boys and girls. © 2013 The Authors. Journal of Paediatrics and Child Health © 2013 Paediatrics and Child Health Division (Royal Australasian College of Physicians).

  16. Exotic high activity surface patterns in PtAu nanoclusters

    KAUST Repository

    Mokkath, Junais Habeeb

    2013-05-09

    The structure and chemical ordering of PtAu nanoclusters of 79, 135, and 201 atoms are studied via a combination of a basin hopping atom-exchange technique (to locate the lowest energy homotops at fixed composition), a symmetry orbit technique (to find the high symmetry isomers), and density functional theory local reoptimization (for determining the most stable homotop). The interatomic interactions between Pt and Au are derived from the empirical Gupta potential. The lowest energy structures show a marked tendency toward PtcoreAushell chemical ordering by enrichment of the more cohesive Pt in the core region and of Au in the shell region. We observe a preferential segregation of Pt atoms to (111) facets and Au atoms to (100) facets of the truncated octahedron cluster motif. Exotic surface patterns are obtained particularly for Pt-rich compositions, where Pt atoms are being surrounded by Au atoms. These surface arrangements boost the catalytic activity by creating a large number of active sites. © 2013 American Chemical Society.

  17. Assessing risk based on uncertain avalanche activity patterns

    Science.gov (United States)

    Zeidler, Antonia; Fromm, Reinhard

    2015-04-01

    Avalanches may affect critical infrastructure and may cause great economic losses. The planning horizon of infrastructures, e.g. hydropower generation facilities, reaches well into the future. Based on the results of previous studies on the effect of changing meteorological parameters (precipitation, temperature) and the effect on avalanche activity we assume that there will be a change of the risk pattern in future. The decision makers need to understand what the future might bring to best formulate their mitigation strategies. Therefore, we explore a commercial risk software to calculate risk for the coming years that might help in decision processes. The software @risk, is known to many larger companies, and therefore we explore its capabilities to include avalanche risk simulations in order to guarantee a comparability of different risks. In a first step, we develop a model for a hydropower generation facility that reflects the problem of changing avalanche activity patterns in future by selecting relevant input parameters and assigning likely probability distributions. The uncertain input variables include the probability of avalanches affecting an object, the vulnerability of an object, the expected costs for repairing the object and the expected cost due to interruption. The crux is to find the distribution that best represents the input variables under changing meteorological conditions. Our focus is on including the uncertain probability of avalanches based on the analysis of past avalanche data and expert knowledge. In order to explore different likely outcomes we base the analysis on three different climate scenarios (likely, worst case, baseline). For some variables, it is possible to fit a distribution to historical data, whereas in cases where the past dataset is insufficient or not available the software allows to select from over 30 different distribution types. The Monte Carlo simulation uses the probability distribution of uncertain variables

  18. Connectivity, excitability and activity patterns in neuronal networks

    Science.gov (United States)

    le Feber, Joost; Stoyanova, Irina I.; Chiappalone, Michela

    2014-06-01

    Extremely synchronized firing patterns such as those observed in brain diseases like epilepsy may result from excessive network excitability. Although network excitability is closely related to (excitatory) connectivity, a direct measure for network excitability remains unavailable. Several methods currently exist for estimating network connectivity, most of which are related to cross-correlation. An example is the conditional firing probability (CFP) analysis which calculates the pairwise probability (CFPi,j) that electrode j records an action potential at time t = τ, given that electrode i recorded a spike at t = 0. However, electrode i often records multiple spikes within the analysis interval, and CFP values are biased by the on-going dynamic state of the network. Here we show that in a linear approximation this bias may be removed by deconvoluting CFPi,j with the autocorrelation of i (i.e. CFPi,i), to obtain the single pulse response (SPRi,j)—the average response at electrode j to a single spike at electrode i. Thus, in a linear system SPRs would be independent of the dynamic network state. Nonlinear components of synaptic transmission, such as facilitation and short term depression, will however still affect SPRs. Therefore SPRs provide a clean measure of network excitability. We used carbachol and ghrelin to moderately activate cultured cortical networks to affect their dynamic state. Both neuromodulators transformed the bursting firing patterns of the isolated networks into more dispersed firing. We show that the influence of the dynamic state on SPRs is much smaller than the effect on CFPs, but not zero. The remaining difference reflects the alteration in network excitability. We conclude that SPRs are less contaminated by the dynamic network state and that mild excitation may decrease network excitability, possibly through short term synaptic depression.

  19. Robust hierarchical state-space models reveal diel variation in travel rates of migrating leatherback turtles.

    Science.gov (United States)

    Jonsen, Ian D; Myers, Ransom A; James, Michael C

    2006-09-01

    1. Biological and statistical complexity are features common to most ecological data that hinder our ability to extract meaningful patterns using conventional tools. Recent work on implementing modern statistical methods for analysis of such ecological data has focused primarily on population dynamics but other types of data, such as animal movement pathways obtained from satellite telemetry, can also benefit from the application of modern statistical tools. 2. We develop a robust hierarchical state-space approach for analysis of multiple satellite telemetry pathways obtained via the Argos system. State-space models are time-series methods that allow unobserved states and biological parameters to be estimated from data observed with error. We show that the approach can reveal important patterns in complex, noisy data where conventional methods cannot. 3. Using the largest Atlantic satellite telemetry data set for critically endangered leatherback turtles, we show that the diel pattern in travel rates of these turtles changes over different phases of their migratory cycle. While foraging in northern waters the turtles show similar travel rates during day and night, but on their southward migration to tropical waters travel rates are markedly faster during the day. These patterns are generally consistent with diving data, and may be related to changes in foraging behaviour. Interestingly, individuals that migrate southward to breed generally show higher daytime travel rates than individuals that migrate southward in a non-breeding year. 4. Our approach is extremely flexible and can be applied to many ecological analyses that use complex, sequential data.

  20. Diel behavior of iron and other heavy metals in a mountain stream with acidic to neutral pH: Fisher Creek, Montana, USA

    Science.gov (United States)

    Gammons, C.H.; Nimick, D.A.; Parker, S.R.; Cleasby, T.E.; McCleskey, R.B.

    2005-01-01

    Three simultaneous 24-h samplings at three sites over a downstream pH gradient were conducted to examine diel fluctuations in heavy metal concentrations in Fisher Creek, a small mountain stream draining abandoned mine lands in Montana. Average pH values at the upstream (F1), middle (F2), and downstream (F3) monitoring stations were 3.31, 5.46, and 6.80, respectively. The downstream increase in pH resulted in precipitation of hydrous ferric oxide (HFO) and hydrous aluminum oxide (HAO) on the streambed. At F1 and F2, Fe showed strong diel cycles in dissolved concentration and Fe(II)/Fe(III) ratio; these cycles were attributed to daytime photoreduction of Fe(III) to Fe(II), reoxidation of Fe(II) to Fe(III), and temperature-dependent hydrolysis and precipitation of HFO. At the near-neutral downstream station, no evidence of Fe(III) photoreduction was observed, and suspended particles of HFO dominated the total Fe load. HFO precipitation rates between F2 and F3 were highest in the afternoon, due in part to reoxidation of a midday pulse of Fe2+ formed by photoreduction in the upper, acidic portions of the stream. Dissolved concentrations of Fe(II) and Cu decreased tenfold and 2.4-fold, respectively, during the day at F3. These changes were attributed to sorption onto fresh HFO surfaces. Results of surface complexation modeling showed good agreement between observed and predicted Cu concentrations at F3, but only when adsorption enthalpies were added to the thermodynamic database to take into account diel temperature variations. The field and modeling results illustrate that the degree to which trace metals adsorb onto actively forming HFO is strongly temperature dependent. This study is an example of how diel Fe cycles caused by redox and hydrolysis reactions can induce a diel cycle in a trace metal of toxicological importance in downstream waters. Copyright ?? 2005 Elsevier Ltd.

  1. School day segmented physical activity patterns of high and low active children

    Science.gov (United States)

    2012-01-01

    Background Variability exists in children’s activity patterns due to the association with environmental, social, demographic, and inter-individual factors. This study described accelerometer assessed physical activity patterns of high and low active children during segmented school week days whilst controlling for potential correlates. Methods Two hundred and twenty-three children (mean age: 10.7 ± 0.3 yrs, 55.6% girls, 18.9% overweight/obese) from 8 north-west England primary schools wore ActiGraph GT1M accelerometers for 7 consecutive days during autumn of 2009. ActiGraph counts were converted to minutes of moderate (MPA), vigorous (VPA) and moderate-to-vigorous (MVPA) physical activity. Children were classified as high active (HIGH) or low active (LOW) depending on the percentage of week days they accumulated at least 60 minutes of MVPA. Minutes spent in MPA and VPA were calculated for school time and non-school time and for five discrete school day segments (before-school, class time, recess, lunchtime, and after-school). Data were analysed using multi-level modelling. Results The HIGH group spent significantly longer in MPA and/or VPA before-school, during class time, lunchtime, and after-school (P children, playground area per student, and temperature, depending on the segment analysed. The additive effect of the segment differences was that the HIGH group accumulated 12.5 minutes per day more MVPA than the LOW group. Conclusions HIGH active children achieved significantly more MPA and VPA than LOW active during four of the five segments of the school day when analyses were adjusted for potential correlates. Physical activity promotion strategies targeting low active children during discretionary physical activity segments of the day, and particularly via structured afterschool physical activity programs may be beneficial. PMID:22672654

  2. School day segmented physical activity patterns of high and low active children.

    Science.gov (United States)

    Fairclough, Stuart J; Beighle, Aaron; Erwin, Heather; Ridgers, Nicola D

    2012-06-06

    Variability exists in children's activity patterns due to the association with environmental, social, demographic, and inter-individual factors. This study described accelerometer assessed physical activity patterns of high and low active children during segmented school week days whilst controlling for potential correlates. Two hundred and twenty-three children (mean age: 10.7 ± 0.3 yrs, 55.6% girls, 18.9% overweight/obese) from 8 north-west England primary schools wore ActiGraph GT1M accelerometers for 7 consecutive days during autumn of 2009. ActiGraph counts were converted to minutes of moderate (MPA), vigorous (VPA) and moderate-to-vigorous (MVPA) physical activity. Children were classified as high active (HIGH) or low active (LOW) depending on the percentage of week days they accumulated at least 60 minutes of MVPA. Minutes spent in MPA and VPA were calculated for school time and non-school time and for five discrete school day segments (before-school, class time, recess, lunchtime, and after-school). Data were analysed using multi-level modelling. The HIGH group spent significantly longer in MPA and/or VPA before-school, during class time, lunchtime, and after-school (P children, playground area per student, and temperature, depending on the segment analysed.The additive effect of the segment differences was that the HIGH group accumulated 12.5 minutes per day more MVPA than the LOW group. HIGH active children achieved significantly more MPA and VPA than LOW active during four of the five segments of the school day when analyses were adjusted for potential correlates. Physical activity promotion strategies targeting low active children during discretionary physical activity segments of the day, and particularly via structured afterschool physical activity programs may be beneficial.

  3. School day segmented physical activity patterns of high and low active children

    Directory of Open Access Journals (Sweden)

    Fairclough Stuart J

    2012-06-01

    Full Text Available Abstract Background Variability exists in children’s activity patterns due to the association with environmental, social, demographic, and inter-individual factors. This study described accelerometer assessed physical activity patterns of high and low active children during segmented school week days whilst controlling for potential correlates. Methods Two hundred and twenty-three children (mean age: 10.7 ± 0.3 yrs, 55.6% girls, 18.9% overweight/obese from 8 north-west England primary schools wore ActiGraph GT1M accelerometers for 7 consecutive days during autumn of 2009. ActiGraph counts were converted to minutes of moderate (MPA, vigorous (VPA and moderate-to-vigorous (MVPA physical activity. Children were classified as high active (HIGH or low active (LOW depending on the percentage of week days they accumulated at least 60 minutes of MVPA. Minutes spent in MPA and VPA were calculated for school time and non-school time and for five discrete school day segments (before-school, class time, recess, lunchtime, and after-school. Data were analysed using multi-level modelling. Results The HIGH group spent significantly longer in MPA and/or VPA before-school, during class time, lunchtime, and after-school (P P  The additive effect of the segment differences was that the HIGH group accumulated 12.5 minutes per day more MVPA than the LOW group. Conclusions HIGH active children achieved significantly more MPA and VPA than LOW active during four of the five segments of the school day when analyses were adjusted for potential correlates. Physical activity promotion strategies targeting low active children during discretionary physical activity segments of the day, and particularly via structured afterschool physical activity programs may be beneficial.

  4. Guiding catalytically active particles with chemically patterned surfaces

    Science.gov (United States)

    Uspal, William; Popescu, Mihail; Dietrich, Siegfried; Tasinkevych, Mykola

    Catalytically active Janus particles in solution create gradients in the chemical composition of the solution along their surfaces, as well as along any nearby container walls. The former leads to self-phoresis, while the latter gives rise to chemi-osmosis, providing an additional contribution to self-motility. Chemi-osmosis strongly depends on the molecular interactions between the diffusing chemical species and the wall. We show analytically, using an approximate ``point-particle'' approach, that by chemically patterning a planar substrate (e.g., by adsorbing two different materials) one can direct the motion of Janus particles: the induced chemi-osmotic flows can cause particles to either ``dock'' at a chemical step between the two materials, or to follow a chemical stripe. These theoretical predictions are confirmed by full numerical calculations. Generically, docking occurs for particles which tend to move away from their catalytic caps, while stripe-following occurs in the opposite case. Our analysis reveals the physical mechanisms governing this behavior.

  5. Detection and identification of speech sounds using cortical activity patterns.

    Science.gov (United States)

    Centanni, T M; Sloan, A M; Reed, A C; Engineer, C T; Rennaker, R L; Kilgard, M P

    2014-01-31

    We have developed a classifier capable of locating and identifying speech sounds using activity from rat auditory cortex with an accuracy equivalent to behavioral performance and without the need to specify the onset time of the speech sounds. This classifier can identify speech sounds from a large speech set within 40 ms of stimulus presentation. To compare the temporal limits of the classifier to behavior, we developed a novel task that requires rats to identify individual consonant sounds from a stream of distracter consonants. The classifier successfully predicted the ability of rats to accurately identify speech sounds for syllable presentation rates up to 10 syllables per second (up to 17.9 ± 1.5 bits/s), which is comparable to human performance. Our results demonstrate that the spatiotemporal patterns generated in primary auditory cortex can be used to quickly and accurately identify consonant sounds from a continuous speech stream without prior knowledge of the stimulus onset times. Improved understanding of the neural mechanisms that support robust speech processing in difficult listening conditions could improve the identification and treatment of a variety of speech-processing disorders. Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

  6. A facile avenue to conductive polymer brushes via cyclopentadiene-maleimide Diels-Alder ligation.

    Science.gov (United States)

    Yameen, Basit; Rodriguez-Emmenegger, Cesar; Preuss, Corinna M; Pop-Georgievski, Ognen; Verveniotis, Elisseos; Trouillet, Vanessa; Rezek, Bohuslav; Barner-Kowollik, Christopher

    2013-10-07

    Cyclopentadienyl end-capped poly(3-hexylthiophene) was employed to fabricate conductive surface tethered polymer brushes via a facile route based on cyclopentadiene-maleimide Diels-Alder ligation. The efficient nature of the Diels-Alder ligation was further combined with a biomimetic polydopamine-assisted functionalization of surfaces, making it an access route of choice for P3HT surface immobilization.

  7. Modeling Diel Oxygen Dynamics and Ecosystem Metabolism in Weeks Bay, Alabama.

    Science.gov (United States)

    Weeks Bay is a shallow eutrophic estuary that exhibits frequent summertime diel-cycling hypoxia and periods of dissolved oxygen (DO) oversaturation during the day. Diel DO dynamics in shallow estuaries like Weeks Bay are complex, and may be influenced by wind forcing, vertical an...

  8. Warmer night-time temperature promotes microbial heterotrophic activity and modifies stream sediment community.

    Science.gov (United States)

    Freixa, Anna; Acuña, Vicenç; Casellas, Maria; Pecheva, Stoyana; Romaní, Anna M

    2017-09-01

    Diel temperature patterns are changing because of global warming, with higher temperatures being predicted to be more pronounced at night. Biological reactions are temperature dependent, with some occurring only during the daylight hours (e.g., light photosynthesis) and other during the entire day (e.g., respiration). Consequently, we expect the modification of daily temperature cycles to alter microbial biological reactions in stream sediments. Here, we aimed to study the effect of warming and changes of the diel temperature patterns on stream sediment biofilm functions tied to organic carbon decomposition, as well as on biofilm meiofaunal community structure. We performed an eight-week experiment with 12 artificial streams subjected to three different diel temperature patterns: warming, warmer nights and control. Significant effects of warming on biofilm function and structure were mainly detected in the long term. Our results showed that warming altered biofilm function, especially in the warmer nights' treatment, which enhanced β-glucosidase enzyme activity. Interestingly, clear opposite diel patterns were observed for dissolved organic carbon and β-glucosidase activity, suggesting that, at night, sediment bacteria quickly consume the input of photosynthetic dissolved organic carbon labile compounds created during light-time. The biofilm structure was also altered by warming, as both warming and warmer night treatments enhanced copepod abundance and diminished abundances of turbellaria and nematodes, which, in turn, controlled bacterial, algal and ciliate communities. Overall, we conclude that warming has strong effect on sediment biofilm structure and enhanced microbial organic matter degradation which might, consequently, affect higher trophic levels and river carbon cycling. © 2017 John Wiley & Sons Ltd.

  9. Diels-Alder addition to H2O@C60 an electronic and structural study

    Science.gov (United States)

    Reveles, J. Ulises; Govinda, K. C.; Baruah, Tunna; Zope, Rajendra R.

    2017-10-01

    Exohedral reactivity of endohedral fullerenes has aroused a significant interest because of its potential applications. The present letter examines the effect of an entrapped single water molecule on the reactivity of C60. We study the thermodynamics and kinetics of a Diels-Alder reaction occurring at all non-identical bonds of free C60 and H2O@C60. Our calculations show that encapsulation of water does not have a significant effect on H2O@C60 reactivity compared to C60, as attested by the investigation of the reaction under several orientations of H2O inside C60. Reaction and activation energies indicate that [6,6] bonds are the most reactive sites.

  10. Distinct patterns of brain activity characterise lexical activation and competition in spoken word production.

    Directory of Open Access Journals (Sweden)

    Vitória Piai

    Full Text Available According to a prominent theory of language production, concepts activate multiple associated words in memory, which enter into competition for selection. However, only a few electrophysiological studies have identified brain responses reflecting competition. Here, we report a magnetoencephalography study in which the activation of competing words was manipulated by presenting pictures (e.g., dog with distractor words. The distractor and picture name were semantically related (cat, unrelated (pin, or identical (dog. Related distractors are stronger competitors to the picture name because they receive additional activation from the picture relative to other distractors. Picture naming times were longer with related than unrelated and identical distractors. Phase-locked and non-phase-locked activity were distinct but temporally related. Phase-locked activity in left temporal cortex, peaking at 400 ms, was larger on unrelated than related and identical trials, suggesting differential activation of alternative words by the picture-word stimuli. Non-phase-locked activity between roughly 350-650 ms (4-10 Hz in left superior frontal gyrus was larger on related than unrelated and identical trials, suggesting differential resolution of the competition among the alternatives, as reflected in the naming times. These findings characterise distinct patterns of activity associated with lexical activation and competition, supporting the theory that words are selected by competition.

  11. Patterns of Physical Activity Outside of School Time among Japanese Junior High School Students

    Science.gov (United States)

    He, Li; Ishii, Kaori; Shibata, Ai; Adachi, Minoru; Nonoue, Keiko; Oka, Koichiro

    2013-01-01

    Background: Physical activity is beneficial for adolescent health. The physical activity patterns of Japanese adolescents are relatively unknown. Therefore, this study aimed to describe the current patterns of physical activity and to identify sex and grade differences among them. Methods: The participants comprised 714 Japanese adolescents aged…

  12. Connectivity, excitability and activity patterns in neuronal networks

    NARCIS (Netherlands)

    le Feber, Jakob; Stoyanova, Irina; Chiappalone, Michela

    2014-01-01

    Extremely synchronized firing patterns such as those observed in brain diseases like epilepsy may result from excessive network excitability. Although network excitability is closely related to (excitatory) connectivity, a direct measure for network excitability remains unavailable. Several methods

  13. Time Use Patterns between Maintenance, Subsistence and Leisure Activities: A Case Study in China

    Science.gov (United States)

    Hui-fen, Zhou; Zhen-shan, Li; Dong-qian, Xue; Yang, Lei

    2012-01-01

    The Chinese government conducted its first time use survey of the activities of Chinese individuals in 2008. Activities were classified into three broad types, maintenance activities, subsistence activities and leisure activities. Time use patterns were defined by an individuals' time spent on maintenance, subsistence and leisure activities each…

  14. Contrasting activity patterns of sympatric and allopatric black and grizzly bears

    Science.gov (United States)

    Schwartz, C.C.; Cain, S.L.; Podruzny, S.; Cherry, S.; Frattaroli, L.

    2010-01-01

    The distribution of grizzly (Ursus arctos) and American black bears (U. americanus) overlaps in western North America. Few studies have detailed activity patterns where the species are sympatric and no studies contrasted patterns where populations are both sympatric and allopatric. We contrasted activity patterns for sympatric black and grizzly bears and for black bears allopatric to grizzly bears, how human influences altered patterns, and rates of grizzlyblack bear predation. Activity patterns differed between black bear populations, with those sympatric to grizzly bears more day-active. Activity patterns of black bears allopatric with grizzly bears were similar to those of female grizzly bears; both were crepuscular and day-active. Male grizzly bears were crepuscular and night-active. Both species were more night-active and less day-active when ???1 km from roads or developments. In our sympatric study area, 2 of 4 black bear mortalities were due to grizzly bear predation. Our results suggested patterns of activity that allowed for intra- and inter-species avoidance. National park management often results in convergence of locally high human densities in quality bear habitat. Our data provide additional understanding into how bears alter their activity patterns in response to other bears and humans and should help park managers minimize undesirable bearhuman encounters when considering needs for temporal and spatial management of humans and human developments in bear habitats. ?? 2010 The Wildlife Society.

  15. Evidence of diel vertical migration in Mnemiopsis leidyi.

    Science.gov (United States)

    Haraldsson, Matilda; Båmstedt, Ulf; Tiselius, Peter; Titelman, Josefin; Aksnes, Dag L

    2014-01-01

    The vertical distribution and migration of plankton organisms may have a large impact on their horizontal dispersal and distribution, and consequently on trophic interactions. In this study we used video-net profiling to describe the fine scale vertical distribution of Mnemiopsis leidyi in the Kattegat and Baltic Proper. Potential diel vertical migration was also investigated by frequent filming during a 24-hour cycle at two contrasting locations with respect to salinity stratification. The video profiles revealed a pronounced diel vertical migration at one of the locations. However, only the small and medium size classes migrated, on average 0.85 m h(-1), corresponding to a total migration distance of 10 m during 12 h. Larger individuals (with well developed lobes, approx. >27 mm) stay on average in the same depth interval at all times. Biophysical data suggest that migrating individuals likely responded to light, and avoided irradiance levels higher than approx. 10 µmol quanta m(-2) s(-1). We suggest that strong stratification caused by low surface salinity seemed to prohibit vertical migration.

  16. Evidence of diel vertical migration in Mnemiopsis leidyi.

    Directory of Open Access Journals (Sweden)

    Matilda Haraldsson

    Full Text Available The vertical distribution and migration of plankton organisms may have a large impact on their horizontal dispersal and distribution, and consequently on trophic interactions. In this study we used video-net profiling to describe the fine scale vertical distribution of Mnemiopsis leidyi in the Kattegat and Baltic Proper. Potential diel vertical migration was also investigated by frequent filming during a 24-hour cycle at two contrasting locations with respect to salinity stratification. The video profiles revealed a pronounced diel vertical migration at one of the locations. However, only the small and medium size classes migrated, on average 0.85 m h(-1, corresponding to a total migration distance of 10 m during 12 h. Larger individuals (with well developed lobes, approx. >27 mm stay on average in the same depth interval at all times. Biophysical data suggest that migrating individuals likely responded to light, and avoided irradiance levels higher than approx. 10 µmol quanta m(-2 s(-1. We suggest that strong stratification caused by low surface salinity seemed to prohibit vertical migration.

  17. Clustering and Pattern Formation in Chemorepulsive Active Colloids.

    Science.gov (United States)

    Liebchen, Benno; Marenduzzo, Davide; Pagonabarraga, Ignacio; Cates, Michael E

    2015-12-18

    We demonstrate that migration away from self-produced chemicals (chemorepulsion) generates a generic route to clustering and pattern formation among self-propelled colloids. The clustering instability can be caused either by anisotropic chemical production, or by a delayed orientational response to changes of the chemical environment. In each case, chemorepulsion creates clusters of a self-limiting area which grows linearly with self-propulsion speed. This agrees with recent observations of dynamic clusters in Janus colloids (albeit not yet known to be chemorepulsive). More generally, our results could inform design principles for the self-assembly of chemorepulsive synthetic swimmers and/or bacteria into nonequilibrium patterns.

  18. Diel sugar feeding and reproductive behaviours of Aedes aegypti mosquitoes in Trinidad: with implications for mass release of sterile mosquitoes.

    Science.gov (United States)

    Chadee, Dave D; Sutherland, Joan M; Gilles, Jeremie R L

    2014-04-01

    Studies on the diel sugar feeding periodicity of male and female Aedes aegypti were conducted under laboratory conditions and monitored in single cages using the polyphagometer device and examined every 2h. Males mosquitoes displayed two peaks in sugar feeding, a small morning peak at 06.00-08.00 h (16% of sugar feeding) and a significant evening peak at 16.00-18.00 h (40% of sugar feeding). A similar pattern was observed among females: a small early morning peak (18% of sugar feeding) and a significant peak in the evening 16.00-18.00 h (42% of sugar feeding). Studies on the effects of sugar feeding on the excitation of males showed 100% erect antennal fibrillae after 36 h. In contrast, only 15% of the water-fed males responded. Laboratory studies on the effects of sugar feeding on the insemination rates of A. aegypti females showed similar inseminations rates among sugar and water fed males but after 4 days all water fed males died while the sugar fed males continued to survive and inseminate females. The synchronization of the male and female diel sugar feeding periodicity is discussed in the context of sterile insect techniques or genetic control methods. Copyright © 2013 International Atomic Energy Agency 2013. Published by Elsevier B.V. All rights reserved.

  19. Experimental evidence for diel variations of the carbon isotope composition in leaf, stem and phloem sap organic matter in Ricinus communis.

    Science.gov (United States)

    Gessler, Arthur; Tcherkez, Guillaume; Peuke, Andreas D; Ghashghaie, Jaleh; Farquhar, Graham D

    2008-07-01

    Carbon isotope fractionation in metabolic processes following carboxylation of ribulose-1,5-bisphosphate (RuBP) is not as well described as the discrimination during photosynthetic CO(2) fixation. However, post-carboxylation fractionation can influence the diel variation of delta(13)C of leaf-exported organic matter and can cause inter-organ differences in delta(13)C. To obtain a more mechanistic understanding of post-carboxylation modification of the isotopic signal as governed by physiological and environmental controls, we combined the modelling approach of Tcherkez et al., which describes the isotopic fractionation in primary metabolism with the experimental determination of delta(13)C in leaf and phloem sap and root carbon pools during a full diel course. There was a strong diel variation of leaf water-soluble organic matter and phloem sap sugars with relatively (13)C depleted carbon produced and exported during the day and enriched carbon during the night. The isotopic modelling approach reproduces the experimentally determined day-night differences in delta(13)C of leaf-exported carbon in Ricinus communis. These findings support the idea that patterns of transitory starch accumulation and remobilization govern the diel rhythm of delta(13)C in organic matter exported by leaves. Integrated over the whole 24 h day, leaf-exported carbon was enriched in (13)C as compared with the primary assimilates. This may contribute to the well-known--yet poorly explained--relative (13)C depletion of autotrophic organs compared with other plant parts. We thus emphasize the need to consider post-carboxylation fractionations for studies that use delta(13)C for assessing environmental effects like water availability on ratio of mole fractions of CO(2) inside and outside the leaf (e.g. tree ring studies), or for partitioning of CO(2) fluxes at the ecosystem level.

  20. Diel variations in the carbon isotope composition of respired CO2 and associated carbon sources: a review of dynamics and mechanisms

    Directory of Open Access Journals (Sweden)

    C. Werner

    2011-09-01

    Full Text Available Recent advances have improved our methodological approaches and theoretical understanding of post-photosynthetic carbon isotope fractionation processes. Nevertheless we still lack a clear picture of the origin of short-term variability in δ13C of respired CO2 (δ13Cres and organic carbon fractions on a diel basis. Closing this knowledge gap is essential for the application of stable isotope approaches for partitioning ecosystem respiration, tracing carbon flow through plants and ecosystems and disentangling key physiological processes in carbon metabolism of plants. In this review we examine the short-term dynamics in δ13Cres and putative substrate pools at the plant, soil and ecosystem scales and discuss mechanisms, which might drive diel δ13Cres dynamics at each scale. Maximum reported variation in diel δ13Cres is 4.0, 5.4 and 14.8 ‰ in trunks, roots and leaves of different species and 12.5 and 8.1 ‰ at the soil and ecosystem scale in different biomes. Temporal variation in post-photosynthetic isotope fractionation related to changes in carbon allocation to different metabolic pathways is the most plausible mechanistic explanation for observed diel dynamics in δ13Cres. In addition, mixing of component fluxes with different temporal dynamics and isotopic compositions add to the δ13Cres variation on the soil and ecosystem level. Understanding short-term variations in δ13Cres is particularly important for ecosystem studies, since δ13Cres contains information on the fate of respiratory substrates, and may, therefore, provide a non-intrusive way to identify changes in carbon allocation patterns.

  1. Weighted Local Active Pixel Pattern (WLAPP for Face Recognition in Parallel Computation Environment

    Directory of Open Access Journals (Sweden)

    Gundavarapu Mallikarjuna Rao

    2013-10-01

    Full Text Available Abstract  - The availability of multi-core technology resulted totally new computational era. Researchers are keen to explore available potential in state of art-machines for breaking the bearer imposed by serial computation. Face Recognition is one of the challenging applications on so ever computational environment. The main difficulty of traditional Face Recognition algorithms is lack of the scalability. In this paper Weighted Local Active Pixel Pattern (WLAPP, a new scalable Face Recognition Algorithm suitable for parallel environment is proposed.  Local Active Pixel Pattern (LAPP is found to be simple and computational inexpensive compare to Local Binary Patterns (LBP. WLAPP is developed based on concept of LAPP. The experimentation is performed on FG-Net Aging Database with deliberately introduced 20% distortion and the results are encouraging. Keywords — Active pixels, Face Recognition, Local Binary Pattern (LBP, Local Active Pixel Pattern (LAPP, Pattern computing, parallel workers, template, weight computation.  

  2. Diel and Seasonal Activities of Culicoides spp. near Yankeetown, Florida.

    Science.gov (United States)

    1985-01-01

    or cotton soaked with a sucrose solution are used to feed individuals in the laboratory (Jones, 1966). Nectar of flowers, honey dew, extrafloral...R.V., A.E. Colwell, and D.K. McClusky. 1980. Studies of Culicoides occidentalis at Borax Lake, California. Proc. Papers Calif. Mosq. Vector Control

  3. An investigation of patterns of children's sedentary and vigorous physical activity throughout the week

    National Research Council Canada - National Science Library

    Steele, Rebekah M; van Sluijs, Esther Mf; Sharp, Stephen J; Landsbaugh, Jill R; Ekelund, Ulf; Griffin, Simon J

    2010-01-01

    Participation in higher intensity activity (i.e. vigorous physical activity [VPA]) appears more consistently associated with lower adiposity, unfortunately little is known about the nature and patterns of VPA participation in children...

  4. Caracterización dieléctrica de la perovskita laminar La1.5Sr0.5CoO4

    Directory of Open Access Journals (Sweden)

    Rivas, J.

    2004-06-01

    Full Text Available In this work, the behaviour of the real and imaginary components of the dielectric permittivity of layered perovskite La1.5Sr0.5CoO4 have been studied, in the frequency range 20 Hz-1 MHz and in the temperature range 115-350 K. Polycrystalline samples were prepared by the ceramic method. The powder diffraction results showed the pattern of the desired phase together with a small quantities of La2O3 impurities. A comparative study of the electrical and magnetic properties of this charge-ordered compound (TCO∼750 K has revealed a basically semiconductor behaviour with a complex bidimensional antiferromagnetism which can be explained on the basis of a thermally activated evolution of the spin state of the Co3+ ions. A detailed investigation of the dielectric properties of this system has allowed us to identify two superimposed relaxation processes: the first one in the low frequency range (f En este trabajo se estudia el comportamiento de las componentes real e imaginaria de la permitividad dieléctrica compleja en función de la frecuencia (20 Hz-1 MHz y la temperatura (115-350 K de la perovskita laminar La1.5Sr0.5CoO4. Para realizar este estudio preparamos muestras policristalinas utilizando el método cerámico. El análisis por difracción de rayos X mostró la presencia de la fase deseada y una pequeña impureza de La2O3. Un estudio comparativo de las propiedades eléctricas y magnéticas de este compuesto con orden de carga (TCO∼750 K, reveló que básicamente se trata de un material semiconductor con un complejo antiferromagnetismo bidimensional que evoluciona con la temperatura debido a transiciones del estado de espín del Co3+ activadas térmicamente. Una investigación detallada de las propiedades dieléctricas de este sistema nos permitió identificar dos fenómenos de relajación superpuestos: uno presente a bajas frecuencias (f < 102 Hz que se asocia con los procesos de conducción por “hopping” electrónico en este cristal i

  5. Analysis of Gait Pattern to Recognize the Human Activities

    Directory of Open Access Journals (Sweden)

    Jay Prakash Gupta

    2014-09-01

    Full Text Available Human activity recognition based on the computer vision is the process of labelling image sequences with action labels. Accurate systems for this problem are applied in areas such as visual surveillance, human computer interaction and video retrieval. The challenges are due to variations in motion, recording settings and gait differences. Here we propose an approach to recognize the human activities through gait. Activity recognition through Gait is the process of identifying an activity by the manner in which they walk. The identification of human activities in a video, such as a person is walking, running, jumping, jogging etc are important activities in video surveillance. We contribute the use of Model based approach for activity recognition with the help of movement of legs only. Experimental results suggest that our method are able to recognize the human activities with a good accuracy rate and robust to shadows present in the videos.

  6. Active patterning and asymmetric transport in a model actomyosin network

    Science.gov (United States)

    Wang, Shenshen; Wolynes, Peter G.

    2013-12-01

    Cytoskeletal networks, which are essentially motor-filament assemblies, play a major role in many developmental processes involving structural remodeling and shape changes. These are achieved by nonequilibrium self-organization processes that generate functional patterns and drive intracellular transport. We construct a minimal physical model that incorporates the coupling between nonlinear elastic responses of individual filaments and force-dependent motor action. By performing stochastic simulations we show that the interplay of motor processes, described as driving anti-correlated motion of the network vertices, and the network connectivity, which determines the percolation character of the structure, can indeed capture the dynamical and structural cooperativity which gives rise to diverse patterns observed experimentally. The buckling instability of individual filaments is found to play a key role in localizing collapse events due to local force imbalance. Motor-driven buckling-induced node aggregation provides a dynamic mechanism that stabilizes the two-dimensional patterns below the apparent static percolation limit. Coordinated motor action is also shown to suppress random thermal noise on large time scales, the two-dimensional configuration that the system starts with thus remaining planar during the structural development. By carrying out similar simulations on a three-dimensional anchored network, we find that the myosin-driven isotropic contraction of a well-connected actin network, when combined with mechanical anchoring that confers directionality to the collective motion, may represent a novel mechanism of intracellular transport, as revealed by chromosome translocation in the starfish oocyte.

  7. Highly Regio- and Stereoselective Diels-Alder Cycloadditions via Two-Step and Multicomponent Reactions Promoted by Infrared Irradiation under Solvent-Free Conditions

    Directory of Open Access Journals (Sweden)

    Francisco Delgado

    2012-02-01

    Full Text Available Infrared irradiation promoted the Diels-Alder cycloadditions of exo-2-oxazolidinone dienes 1–3 with the Knoevenagel adducts 4–6, as dienophiles, leading to the synthesis of new 3,5-diphenyltetrahydrobenzo[d]oxazol-2-one derivatives (7, 9, 11 and 13–17, under solvent-free conditions. These cycloadditions were performed with good regio- and stereoselectivity, favoring the para-endo cycloadducts. We also evaluated the one-pot three-component reaction of active methylene compounds 20, benzaldehydes 21 and exo-2-oxazolidinone diene 2 under the same reaction conditions. A cascade Knoevenagel condensation/Diels-Alder cycloaddition reaction was observed, resulting in the final adducts 13–16 in similar yields. These procedures are environmentally benign, because no solvent and no catalyst were employed in these processes. The regioselectivity of these reactions was rationalized by Frontier Molecular Orbital (FMO calculations.

  8. Solanapyrone synthase, a possible Diels-Alderase and iterative type I polyketide synthase encoded in a biosynthetic gene cluster from Alternaria solani.

    Science.gov (United States)

    Kasahara, Ken; Miyamoto, Takanori; Fujimoto, Takashi; Oguri, Hiroki; Tokiwano, Tetsuo; Oikawa, Hideaki; Ebizuka, Yutaka; Fujii, Isao

    2010-06-14

    The solanapyrone biosynthetic gene cluster was cloned from Alternaria solani. It consists of six genes-sol1-6-coding for a polyketide synthase, an O-methyltransferase, a dehydrogenase, a transcription factor, a flavin-dependent oxidase, and cytochrome P450. The prosolanapyrone synthase (PSS) encoded by sol1 was expressed in Aspergillus oryzae and its product was identified as desmethylprosolanapyrone I (8). Although PSS is closely related to the PKSs/Diels-Alderases LovB and MlcA of lovastatin and compactin biosynthesis, it did not catalyze cycloaddition. Sol5, encoding a flavin-dependent oxidase (solanapyrone synthase, SPS), was expressed in Pichia pastoris and purified. The purified recombinant SPS showed activity for the formation of (-)-solanapyrone A (1) from achiral prosolanapyrone II (2), establishing that this single enzyme catalyzes both the oxidation and the subsequent cycloaddition reaction, possibly as a Diels-Alder enzyme.

  9. Vegetation induced diel signal and its meaning in recharge and discharge regions

    Science.gov (United States)

    Gribovszki, Zoltán; Tóth, Tibor; Csáfordi, Péter; Szabó, András; Móricz, Norbert; Kalicz, Péter

    2017-04-01

    Afforestation, promoted by the European Union is planned in Hungary in the next decades. One of the most important region for afforestation is the Hungarian Great Plain where the precipitation is far below potential ET so forests can not survive without significant water uptake from shallow groundwater. Diel fluctuations of hydrological variables (e.g., soil moisture, shallow groundwater level, streamflow rate) are rarely investigated in the hydrologic literature although these short-term fluctuations may incorporate useful information (like groundwater uptake) about hydro-ecological systems in shallow groundwater areas. Vegetation induced diel fluctuations are rarely compared under varying hydrologic conditions (such as recharge and discharge zones). In this study, the data of soil moisture and shallow groundwater monitoring under different surface covers (forest and neighboring agricultural plots) in discharge and recharge regions were analyzed to gain a better understanding of the vegetation hydrological impact or water uptake in changing climate. The pilot areas of the study are located in Hungarian Great Plain and in Western Hungary. The water table under the forest displayed a typical night-time recovery in the discharge region, indicating a significant groundwater supply. Certainly, the root system of the forest was able to tap the groundwater in depths measuring a few metres, while the shallower roots of the herbaceous vegetation generally did not reach the groundwater reservoir at these depths. In the recharge zone the water table under the forest showed step-like diel pattern that refer to a lack of additional groundwater supply from below. The low groundwater evapotranspiration of the forest in the recharge zone was due to the lack of the groundwater supply in the recharge area. Similar patterns can be detected in the soil moisture of recharge and discharge zones as well. Our results suggest that local estimations of groundwater evapotranspiration from

  10. Muscle activation patterns when passively stretching spastic lower limb muscles of children with cerebral palsy.

    Science.gov (United States)

    Bar-On, Lynn; Aertbeliën, Erwin; Molenaers, Guy; Desloovere, Kaat

    2014-01-01

    The definition of spasticity as a velocity-dependent activation of the tonic stretch reflex during a stretch to a passive muscle is the most widely accepted. However, other mechanisms are also thought to contribute to pathological muscle activity and, in patients post-stroke and spinal cord injury can result in different activation patterns. In the lower-limbs of children with spastic cerebral palsy (CP) these distinct activation patterns have not yet been thoroughly explored. The aim of the study was to apply an instrumented assessment to quantify different muscle activation patterns in four lower-limb muscles of children with CP. Fifty-four children with CP were included (males/females n = 35/19; 10.8 ± 3.8 yrs; bilateral/unilateral involvement n =  32/22; Gross Motor Functional Classification Score I-IV) of whom ten were retested to evaluate intra-rater reliability. With the subject relaxed, single-joint, sagittal-plane movements of the hip, knee, and ankle were performed to stretch the lower-limb muscles at three increasing velocities. Muscle activity and joint motion were synchronously recorded using inertial sensors and electromyography (EMG) from the adductors, medial hamstrings, rectus femoris, and gastrocnemius. Muscles were visually categorised into activation patterns using average, normalized root mean square EMG (RMS-EMG) compared across increasing position zones and velocities. Based on the visual categorisation, quantitative parameters were defined using stretch-reflex thresholds and normalized RMS-EMG. These parameters were compared between muscles with different activation patterns. All patterns were dominated by high velocity-dependent muscle activation, but in more than half, low velocity-dependent activation was also observed. Muscle activation patterns were found to be both muscle- and subject-specific (pmuscles into activation patterns (pmuscles with different patterns react differently to treatment.

  11. Design and Analysis of a Silicon-Based Pattern Reconfigurable Antenna Employing an Active Element Pattern Method

    Directory of Open Access Journals (Sweden)

    Ke Han

    2017-01-01

    Full Text Available In this paper, a silicon-based radio frequency micro-electromechanical systems (RF MEMS pattern reconfigurable antenna for a Ka-band application was designed, analyzed, fabricated, and measured. The proposed antenna can steer the beam among three radiating patterns (with main lobe directions of −20°, 0°, and +20° approximately at 35 GHz by switching RF MEMS operating modes. The antenna has a low profile with a small size of 3.7 mm × 4.4 mm × 0.4 mm, and consists of one driven patch, four parasitic patches, two assistant patches, and two RF MEMS switches. The active element pattern method integrated with signal flow diagram was employed to analyze the performances of the proposed antenna. Comparing the measured results with analytical and simulated ones, good agreements are obtained.

  12. Evolutionary patterns of proteinase activity in attine ant fungus gardens

    DEFF Research Database (Denmark)

    Semenova, Tatyana; Hughes, David Peter; Boomsma, Jacobus Jan;

    2011-01-01

    hypothesized that fungal proteinase activity may have been under selection for efficiency and that different classes of proteinases might be involved. Results: We determined proteinase activity profiles across a wide pH range for fungus gardens of 14 Panamanian species of fungus-growing ants, representing...... eight genera. We mapped these activity profiles on an independently obtained molecular phylogeny of the symbionts and show that total proteinase activity in lower attine symbionts peaks at ca. pH 6. The higher attine symbionts that have no known free-living relatives had much higher proteinase...... activities than the lower attine symbionts. Their total in vitro proteinase activity peaked at pH values around 5, which is close to the pH that the ants maintain in their fungus gardens, suggesting that the pH optimum of fungal proteinases may have changed after the irreversible domestication...

  13. Evolutionary patterns of proteinase activity in attine ant fungus gardens

    DEFF Research Database (Denmark)

    Semenova, Tatyana; Hughes, David Peter; Boomsma, Jacobus Jan;

    2011-01-01

    hypothesized that fungal proteinase activity may have been under selection for efficiency and that different classes of proteinases might be involved. Results: We determined proteinase activity profiles across a wide pH range for fungus gardens of 14 Panamanian species of fungus-growing ants, representing...... activities than the lower attine symbionts. Their total in vitro proteinase activity peaked at pH values around 5, which is close to the pH that the ants maintain in their fungus gardens, suggesting that the pH optimum of fungal proteinases may have changed after the irreversible domestication...... of evolutionary more derived fungal symbionts. This notion is also supported by buffering capacities of fungus gardens at pH 5.2 being remarkably high, and suggests that the fungal symbiont actively helps to maintain garden acidity at this specific level. Metalloproteinases dominated the activity profiles...

  14. Individual, Social, and Environmental Correlates of Active Transportation Patterns in French Women

    Directory of Open Access Journals (Sweden)

    Camille Perchoux

    2017-01-01

    Full Text Available The objectives were (1 to define physical activity (PA and sedentary behaviors (SB patterns in daily life contexts (work, leisure, and transportation in French working women from NutriNet-Santé web-cohort and (2 to identify pattern(s of active transportation and their individual, social, and environmental correlates. 23,432 participants completed two questionnaires to evaluate PA and SB in daily life contexts and individual representations of residential neighborhood and transportation modes. Hierarchical cluster analysis was performed which identified 6 distinct movement behavior patterns: (i active occupation, high sedentary leisure, (ii sedentary occupation, low leisure, (iii sedentary transportation, (iv sedentary occupation and leisure, (v active transportation, and (vi active leisure. Multinomial logistic regressions were performed to identify correlates of the “active transportation” cluster. The perceived environmental characteristics positively associated with “active transportation” included “high availability of destinations around home,” “presence of bicycle paths,” and “low traffic.” A “positive image of walking/cycling,” the “individual feeling of being physically active,” and a “high use of active transport modes by relatives/friends” were positively related to “active transportation,” identified as a unique pattern regarding individual and environmental correlates. Identification of PA and SB context-specific patterns will help to understand movement behaviors’ complexity and to design interventions to promote active transportation in specific subgroups.

  15. Mining Emerging Sequential Patterns for Activity Recognition in Body Sensor Networks

    DEFF Research Database (Denmark)

    Gu, Tao; Wang, Liang; Chen, Hanhua

    2010-01-01

    Body Sensor Networks oer many applications in healthcare, well-being and entertainment. One of the emerging applications is recognizing activities of daily living. In this paper, we introduce a novel knowledge pattern named Emerging Sequential Pattern (ESP)|a sequential pattern that discovers...... signicant class dierences|to recognize both simple (i.e., sequential) and complex (i.e., interleaved and concurrent) activities. Based on ESPs, we build our complex activity models directly upon the sequential model to recognize both activity types. We conduct comprehensive empirical studies to evaluate...

  16. Genome-wide profiling of 24 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation.

    Science.gov (United States)

    Rund, Samuel S C; Yoo, Boyoung; Alam, Camille; Green, Taryn; Stephens, Melissa T; Zeng, Erliang; George, Gary F; Sheppard, Aaron D; Duffield, Giles E; Milenković, Tijana; Pfrender, Michael E

    2016-08-18

    Marine and freshwater zooplankton exhibit daily rhythmic patterns of behavior and physiology which may be regulated directly by the light:dark (LD) cycle and/or a molecular circadian clock. One of the best-studied zooplankton taxa, the freshwater crustacean Daphnia, has a 24 h diel vertical migration (DVM) behavior whereby the organism travels up and down through the water column daily. DVM plays a critical role in resource tracking and the behavioral avoidance of predators and damaging ultraviolet radiation. However, there is little information at the transcriptional level linking the expression patterns of genes to the rhythmic physiology/behavior of Daphnia. Here we analyzed genome-wide temporal transcriptional patterns from Daphnia pulex collected over a 44 h time period under a 12:12 LD cycle (diel) conditions using a cosine-fitting algorithm. We used a comprehensive network modeling and analysis approach to identify novel co-regulated rhythmic genes that have similar network topological properties and functional annotations as rhythmic genes identified by the cosine-fitting analyses. Furthermore, we used the network approach to predict with high accuracy novel gene-function associations, thus enhancing current functional annotations available for genes in this ecologically relevant model species. Our results reveal that genes in many functional groupings exhibit 24 h rhythms in their expression patterns under diel conditions. We highlight the rhythmic expression of immunity, oxidative detoxification, and sensory process genes. We discuss differences in the chronobiology of D. pulex from other well-characterized terrestrial arthropods. This research adds to a growing body of literature suggesting the genetic mechanisms governing rhythmicity in crustaceans may be divergent from other arthropod lineages including insects. Lastly, these results highlight the power of using a network analysis approach to identify differential gene expression and provide novel

  17. Analysis of Activity Patterns and Performance in Polio Survivors

    Science.gov (United States)

    2006-10-01

    subjective estimate of their activity level over the past week using the Physical Activity Scale for the Elderly (PASE).3 This instrument dealt with...May 2004. Talaty M. Models for Gait Analysis. 5th SIAMOC (Societa Italiana Di Analisi Del Movimento in Clinica) Congress, Loano, Italy November

  18. Object Relevance Weight Pattern Mining for Activity Recognition and Segmentation

    DEFF Research Database (Denmark)

    Palmes, Paulito Pedregosa; Pung, Hung Keng; Gu, Tao

    2010-01-01

    Monitoring daily activities of a person has many potential benefits in pervasive computing. These include providing proactive support for the elderly and monitoring anomalous behaviors. A typical approach in existing research on activity detection is to construct sequence-based models of low-leve...

  19. Altered lower leg muscle activation patterns in patients with cerebral palsy during cycling on an ergometer

    Science.gov (United States)

    Alves-Pinto, Ana; Blumenstein, Tobias; Turova, Varvara; Lampe, Renée

    2016-01-01

    Objective Cycling on a recumbent ergometer constitutes one of the most popular rehabilitation exercises in cerebral palsy (CP). However, no control is performed on how muscles are being used during training. Given that patients with CP present altered muscular activity patterns during cycling or walking, it is possible that an incorrect pattern of muscle activation is being promoted during rehabilitation cycling. This study investigated patterns of muscular activation during cycling on a recumbent ergometer in patients with CP and whether those patterns are determined by the degree of spasticity and of mobility. Methods Electromyographic (EMG) recordings of lower leg muscle activation during cycling on a recumbent ergometer were performed in 14 adult patients diagnosed with CP and five adult healthy participants. EMG recordings were done with an eight-channel EMG system built in the laboratory. The activity of the following muscles was recorded: Musculus rectus femoris, Musculus biceps femoris, Musculus tibialis anterior, and Musculus gastrocnemius. The degree of muscle spasticity and mobility was assessed using the Modified Ashworth Scale and the Gross Motor Function Classification System, respectively. Muscle activation patterns were described in terms of onset and duration of activation as well as duration of cocontractions. Results Muscle activation in CP was characterized by earlier onsets, longer periods of activation, a higher occurrence of agonist–antagonist cocontractions, and a more variable cycling tempo in comparison to healthy participants. The degree of altered muscle activation pattern correlated significantly with the degree of spasticity. Conclusion This study confirmed the occurrence of altered lower leg muscle activation patterns in patients with CP during cycling on a recumbent ergometer. There is a need to develop feedback systems that can inform patients and therapists of an incorrect muscle activation during cycling and support the training

  20. The effect of pressure on microwave-enhanced Diels-Alder reactions. A case study.

    Science.gov (United States)

    Kaval, Nadya; Dehaen, Wim; Kappe, C Oliver; Van der Eycken, Erik

    2004-01-21

    It is demonstrated that microwave-assisted Diels-Alder reactions of substituted 2(1H)-pyrazinones with ethylene are significantly more effective utilizing pre-pressurized (up to 10 bar) reaction vessels.

  1. Domino Wittig Diels-Alder reaction: An expeditious entry into the AB ring system of furanosesquiterpenes

    Digital Repository Service at National Institute of Oceanography (India)

    Patre, R.E.; Gawas, S.; Sen, S.; Parameswaran, P.S.; Tilve, S.G.

    A domino Wittig Diels - Alder reaction has been employed in delineating a short and flexible synthetic stratagem for ready access to the AB ring system and the tricyclic framework of furanosesquiterpenes, such as the bioactive natural products...

  2. SPATIAL AND DIEL AVAILABILITY OF FLYING INSECTS AS POTENTIAL DUCKLING FOOD IN PRAIRIE WETLANDS.

    Science.gov (United States)

    The study examined spatial and diel availibility of flying insects that are a critical food resource to young duckings. Insects were sampled in three native prairie wetlands on the Woodworth Study Area of south-central North Dakota.

  3. Magnetic Field Fluctuations Due to Diel Vertical Migrations of Zooplankton

    Science.gov (United States)

    Dean, C.; Soloviev, A.

    2016-12-01

    Dean et al. (2016) have indicated that at high zooplankton concentrations, diel vertical migrations (DVM) cause velocity fluctuations and a respective increase of the dissipation rate of turbulent kinetic energy (TKE). In this work, we used a 3D non-hydrostatic computational fluid dynamics model with Lagrangian particle injections (a proxy for migrating organisms) via a discrete phase model to simulate the effect of turbulence generation by DVM. We tested a range of organism concentrations from 1000 to 10,000 organisms/m3. The simulation at an extreme concentration of zooplankton showed an increase in dissipation rate of TKE by two to three orders of magnitude during DVM over background turbulence, 10-8 W kg-1. At lower concentrations (migration times averaged over 11 months of observations (though interpretation of the current velocity measurements is complicated by physical factors such as tides, Florida current meandering, etc.). The deviations in the velocity profiles can in principle be explained by the increase in turbulent mixing during vertical migration periods. In addition, seawater is an electric conductor. Water movements in the magnetic field of the Earth induce electrical currents and, as a result, secondary magnetic fluctuations. The velocity fluctuations produced by DVM are, therefore, supposed to have a magnetic signature. In order to test this hypothesis, we have applied a magnetohydrodnamics add-on module to the hydrodynamic model. The model results indicate that DVM of an extreme concentration of zooplankton may create fluctuations of the total magnetic field on the order of 1 nT, which are comparable to the magnetic signature of surface or internal waves. These are relatively small magnetic fluctuations, compared to the Earth's magnetic field, but are well within the range of modern magnetometers. Dean, C., A. Soloviev, A. Hirons, T. Frank, J. Wood, 2016: Biomixing due to diel vertical migrations of zooplankton. Ocean Modelling 98, 51-64.

  4. Disease activity patterns over time in patients with SLE: analysis of the Hopkins Lupus Cohort

    Science.gov (United States)

    Györi, Noémi; Giannakou, Ioanna; Chatzidionysiou, Katerina; Magder, Laurence; van Vollenhoven, Ronald F; Petri, Michelle

    2017-01-01

    Objective To describe SLE disease activity patterns in the Hopkins Lupus Cohort. Methods Disease activity was studied in 1886 patients followed-up for 1–28 years. Disease activity patterns were defined using (1) Physician Global Assessment (PGA) and (2) modified SLE Disease Activity Index (M-SLEDAI) as follows: long quiescent (LQ), M-SLEDAI=0/PGA=0 at all visits; relapsing-remitting (RR), periods of activity (M-SLEDAI>0/PGA>0) interspersed with inactivity (M-SLEDAI=0/PGA=0); chronic active (CA), M-SLEDAI>0/PGA>0 at all visits. The pattern of first 3 consecutive follow-up years was determined in 916 patients as: persistent LQ (pLQ), persistent RR (pRR) and persistent CA (pCA), LQ, RR and CA pattern in each of the 3 years, respectively; mixed, at least two different pattern types were identified. Results The RR pattern accounted for the greatest proportion of follow-up time both by M-SLEDAI and PGA, representing 53.8% and 49.9% of total patient-years, respectively. The second most frequent pattern was LQ based on M-SLEDAI (30.7%) and CA based on PGA (40.4%). For the first 3-year intervals, the mixed pattern type was the most common (56.6%). The pRR was the second most frequent (M-SLEDAI 33.3%, PGA 26.5%), while pLQ (M-SLEDAI 6.4%, PGA 0.7%) and pCA were less frequent (M-SLEDAI 3.7%, PGA 16.3%). Conclusions The RR pattern was the most prevalent pattern. LQ was achieved in a subset of patients, using the M-SLEDAI. However, the PGA captured mild activity missed on the M-SLEDAI in these patients. Over a 3-year perspective, less than half of patients maintained their original pattern. PMID:28243457

  5. epSICAR: An Emerging Patterns based Approach to Sequential, Interleaved and Concurrent Activity Recognition

    DEFF Research Database (Denmark)

    Gu, Tao; Wu, Zhanqing; Tao, Xianping;

    2009-01-01

    upon the training dataset for complex activities, we build our activity models by mining a set of Emerging Patterns from the sequential activity trace only and apply our models in recognizing sequential, interleaved and concurrent activities. We conduct our empirical studies in a real smart home...

  6. Activity patterns in latissimus dorsi and sternocleidomastoid in classical singers.

    Science.gov (United States)

    Watson, Alan H D; Williams, Caitlin; James, Buddug V

    2012-05-01

    The aim of this study was to investigate and compare the roles of the accessory respiratory muscles, latissimus dorsi (LD), and sternocleidomastoid, in classical singing. Electromyography was used to record the activity of these muscles in six classically trained female singers carrying out a number of singing and nonsinging tasks. Movements of the chest and abdominal walls were monitored simultaneously using inductive plethysmography, and the sound of the phonations was recorded. In normal breathing, LD is active transiently during very deep inhalations and in inhalation against resistance. During exhalation it becomes active again as residual capacity is approached or when air is expelled with great force. Sternocleidomastoid (SCM) supports inhalation when lung volume nears 100% vital capacity or when this is very rapid. All singers engaged LD in supported singing where it was associated with maintaining an expanded thorax. In coloratura singing, pulses of activity of increasing amplitude were often seen in LD toward the end of the breath. These were synchronized with each note. During a short phrase typical of the end of an aria, which was sung at full volume with the projected voice, both LD and SCM were active simultaneously. Spectral analysis of muscle activity demonstrated that in some singers, activity in LD and more rarely SCM, fluctuated in phase with vibrato. LD appears to play a significant role in maintaining chest expansion and the dynamic processes underlying vibrato and coloratura singing in classically trained singers. Copyright © 2012 The Voice Foundation. Published by Mosby, Inc. All rights reserved.

  7. Physical activity and mammographic parenchymal patterns among Greek postmenopausal women.

    Science.gov (United States)

    Marmara, Eleni A; Papacharalambous, Xenofon N; Kouloulias, Vassilios E; Maridaki, D Maria; Baltopoulos, J Panayiotis

    2011-05-01

    To examine whether physical activity during the last five years is related to later breast mammographic density in postmenopausal Greek women. We designed a cross-sectional study in 724 women, of ages 45-67 years. An interview-administered questionnaire was used to obtain information on duration and intensity of recreational physical activity during five years preceding study recruitment. Mammograms were evaluated according to BIRADS classification and BIRADS score was also estimated. Multivariate ordinal logistic regression analysis was used to assess associations between physical activity index and breast density according to the BIRADS classification methods. We observed a statistically significant inverse association of mammographic breast density measured by the BIRADS classification method and recreational exercise (OR=-0.10; 95% CI -0.018, -0.001; p=0.022). For one unit increase in physical activity as expressed by the MET-h/week score, the odds of lower versus higher breast density categories are 1.105 greater, given that all of the other variables in the model are held constant. A modifying effect by age at recruitment was evident among participants, with a stronger inverse association between recreational activity and mammographic breast density among older women (OR=-0.036; 95% CI -0.063, -0.009; p=0.009). An inverse association between physical activity and BIRADS score was evident, not reaching statistical significance (OR=0.00; 95% CI -0.009, 0.008; p=0.887). Mammographic breast area was lower in postmenopausal women who participated in sports/recreational physical activity compared to inactive controls. Increasing physical activity levels among postmenopausal women might be a reasonable approach to reduce mammographic density. However, until more physical activity and mammographic breast density studies are conducted that confirm our findings, they have to be interpreted with caution, due to the retrospective nature of our data and the possibility of

  8. Partial diel migration: A facultative migration underpinned by long-term inter-individual variation.

    Science.gov (United States)

    Harrison, Philip M; Gutowsky, Lee F G; Martins, Eduardo G; Patterson, David A; Cooke, Steven J; Power, Michael

    2017-09-01

    The variations in migration that comprise partial diel migrations, putatively occur entirely as a consequence of behavioural flexibility. However, seasonal partial migrations are increasingly recognised to be mediated by a combination of reversible plasticity in response to environmental variation and individual variation due to genetic and environmental effects. Here, we test the hypothesis that while partial diel migration heterogeneity occurs primarily due to short-term within-individual flexibility in behaviour, long-term individual differences in migratory behaviour also underpin this migration variation. Specifically, we use a hierarchical behavioural reaction norm approach to partition within- and among-individual variation in depth use and diel plasticity in depth use, across short- and long-term time-scales, in a group of 47 burbot (Lota lota) tagged with depth-sensing acoustic telemetry transmitters. We found that within-individual variation at the among-dates-within-seasons and among-seasons scale, explained the dominant proportion of phenotypic variation. However, individuals also repeatedly differed in their expression of migration behaviour over the 2 year study duration. These results reveal that diel migration variation occurs primarily due to short-term within-individual flexibility in depth use and diel migration behaviour. However, repeatable individual differences also played a key role in mediating partial diel migration. These findings represent a significant advancement of our understanding of the mechanisms generating the important, yet poorly understood phenomena of partial diel migration. Moreover, given the pervasive occurrence of diel migrations across aquatic taxa, these findings indicate that individual differences have an important, yet previously unacknowledged role in structuring the temporal and vertical dynamics of aquatic ecosystems. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

  9. Distributed dynamical computation in neural circuits with propagating coherent activity patterns.

    Directory of Open Access Journals (Sweden)

    Pulin Gong

    2009-12-01

    Full Text Available Activity in neural circuits is spatiotemporally organized. Its spatial organization consists of multiple, localized coherent patterns, or patchy clusters. These patterns propagate across the circuits over time. This type of collective behavior has ubiquitously been observed, both in spontaneous activity and evoked responses; its function, however, has remained unclear. We construct a spatially extended, spiking neural circuit that generates emergent spatiotemporal activity patterns, thereby capturing some of the complexities of the patterns observed empirically. We elucidate what kind of fundamental function these patterns can serve by showing how they process information. As self-sustained objects, localized coherent patterns can signal information by propagating across the neural circuit. Computational operations occur when these emergent patterns interact, or collide with each other. The ongoing behaviors of these patterns naturally embody both distributed, parallel computation and cascaded logical operations. Such distributed computations enable the system to work in an inherently flexible and efficient way. Our work leads us to propose that propagating coherent activity patterns are the underlying primitives with which neural circuits carry out distributed dynamical computation.

  10. fMRI activation patterns in an analytic reasoning task: consistency with EEG source localization

    Science.gov (United States)

    Li, Bian; Vasanta, Kalyana C.; O'Boyle, Michael; Baker, Mary C.; Nutter, Brian; Mitra, Sunanda

    2010-03-01

    Functional magnetic resonance imaging (fMRI) is used to model brain activation patterns associated with various perceptual and cognitive processes as reflected by the hemodynamic (BOLD) response. While many sensory and motor tasks are associated with relatively simple activation patterns in localized regions, higher-order cognitive tasks may produce activity in many different brain areas involving complex neural circuitry. We applied a recently proposed probabilistic independent component analysis technique (PICA) to determine the true dimensionality of the fMRI data and used EEG localization to identify the common activated patterns (mapped as Brodmann areas) associated with a complex cognitive task like analytic reasoning. Our preliminary study suggests that a hybrid GLM/PICA analysis may reveal additional regions of activation (beyond simple GLM) that are consistent with electroencephalography (EEG) source localization patterns.

  11. Modelling the emergence of spatial patterns of economic activity

    CERN Document Server

    Yang, Jung-Hun; Frenken, Koen

    2012-01-01

    Understanding how spatial configurations of economic activity emerge is important when formulating spatial planning and economic policy. A simple model was proposed by Simon, who assumed that firms grow at a rate proportional to their size, and that new divisions of firms with certain probabilities relocate to other firms or to new centres of economic activity. Simon's model produces realistic results in the sense that the sizes of economic centres follow a Zipf distribution, which is also observed in reality. It lacks realism in the sense that mechanisms such as cluster formation, congestion (defined as an overly high density of the same activities) and dependence on the spatial distribution of external parties (clients, labour markets) are ignored. The present paper proposed an extension of the Simon model that includes both centripetal and centrifugal forces. Centripetal forces are included in the sense that firm divisions are more likely to settle in locations that offer a higher accessibility to other fi...

  12. Downward export of respiratory carbon and dissolved inorganic nitrogen by diel-migrant mesozooplankton at the JGOFS Bermuda time-series station

    Science.gov (United States)

    Dam, Hans G.; Roman, Michael R.; Youngbluth, Marsh J.

    1995-07-01

    Published calculations suggest that downward fluxes of respiratory carbon (RC) and dissolved inorganic nitrogen (DIN) associated with diel-migrant zooplankton are significant forms of export production. In this study, we examined variability in downward fluxes of RC and DIN due to diel-migrant mesozooplankton (200-2000 μm) on seven occasions between 25 March and 8 April 1990 at the JGOFS (Joint Global Ocean Flux Study) station off Bermuda. Downward fluxes due to migrators crossing 150 m ranged from 6 to 41 mgC m -2 day -1 (RC) and 2 to 5 mgN m -2 day -1 (DIN). In comparison to gravitational fluxes of POC and PON measured with particle traps at 150m during the same period, mesozooplankton RC flux was 18-70% of POCflux and mesozooplankton DIN flux was 17-82% of PON flux. If the RC and DIN fluxes due to migrators are considered in calculations of export production, the percentage of the production exported below 150 m over the study period would increase by an average of 25% for carbon and 21% for nitrogen. These results support the contention that metabolic activities of diel-migrant zooplankton should be included in calculations of export of carbon and nitrogen out of the mixed layer.

  13. Patterns of presynaptic activity and synaptic strength interact to produce motor output.

    Science.gov (United States)

    Wright, Terrence Michael; Calabrese, Ronald L

    2011-11-30

    Motor neuron activity is coordinated by premotor networks into a functional motor pattern by complex patterns of synaptic drive. These patterns combine both the temporal pattern of spikes of the premotor network and the profiles of synaptic strengths (i.e., conductances). Given the complexity of premotor networks in vertebrates, it has been difficult to ascertain the relative contributions of temporal patterns and synaptic strength profiles to the motor patterns observed in these animals. Here, we use the leech (Hirudo sp.) heartbeat central pattern generator (CPG), in which we can measure both the temporal pattern and the synaptic strength profiles of the entire premotor network and the motor outflow in individual animals. In this system, a series of motor neurons all receive input from the same premotor interneurons of the CPG but must be coordinated differentially to produce a functional pattern. These properties allow a theoretical and experimental dissection of the rules that govern how temporal patterns and synaptic strength profiles are combined in motor neurons so that functional motor patterns emerge, including an analysis of the impact of animal-to-animal variation in input to such variation in output. In the leech, segmental heart motor neurons are coordinated alternately in a synchronous and peristaltic pattern. We show that synchronous motor patterns result from a nearly synchronous premotor temporal pattern produced by the leech heartbeat CPG. For peristaltic motor patterns, the staggered premotor temporal pattern determines the phase range over which segmental motor neurons can fire while synaptic strength profiles define the intersegmental motor phase progression realized.

  14. Diel vertical migrations of age 0+ percids in a shallow, well-mixed reservoir

    Directory of Open Access Journals (Sweden)

    Jaromír SEĎA

    2010-08-01

    Full Text Available The distribution of age 0+ percids (perch, Perca fluviatilis and pikeperch, Sander lucioperca was investigated in a shallow, wellmixed reservoir during a 24-h period in late May, using acoustic and netting methods. Diel vertical migrations (DVMs were acoustically recorded between the layers close to the bottom and the whole water column. The netting data showed a high abundance of larvae and juveniles at night (nearly 1 ind m-3, or 6 ind m-2, whereas negligible numbers of age 0+ percids were present in the water column during the day (3% of night abundance. Age 0+ percids remained during the day in the layer very close to bottom. Smaller pikeperch larvae dominated the pelagic age 0+ fish assemblage during daylight, while larger perch prevailed at night. A strong difference between day and night abundances along with a clear pattern discerned by acoustic methods revealed the DVM of age 0+ percids. Analyses of the fish digestive tract contents indicate that DVM was not governed by feeding behaviour, but rather a defensive strategy against predation. This is in agreement with the size distribution of age 0+ percids, since they were smaller in water column during the day as opposed to the night.

  15. Reactivity of N-Phenyl-1-Aza-2-Cyano-1,3-Butadienes in the Diels-Alder Reaction.

    Science.gov (United States)

    Sisti, Nicholas J.; Motorina, Irina A.; Tran Huu Dau, Marie-Elise; Riche, Claude; Fowler, Frank W.; Grierson, David S.

    1996-05-31

    It is found that N-phenyl-2-cyano-1-azadiene 4, prepared via a two-step, one-pot, sequence from acrylanilide, undergoes efficient [4 + 2] cycloaddition with a complete range of electron rich, electron poor, and neutral dienophiles under remarkably mild thermal conditions (90-120 degrees C for 20-48 h). Regiospecific formation of the alpha-cycloadduct wherein the dienophile substituent is alpha to nitrogen is observed for vinyl ethers and styrene, whereas the Diels-Alder reactions with methyl acrylate and methyl vinyl ketone (MVK) produce alpha/beta mixtures in which the alpha-cycloadduct is the major regioisomer (approximately 4-5:1). An essentially identical reaction pattern was observed in the Diels-Alder reaction of N-(p-methoxyphenyl)-2-cyano-1-azadiene 18 and the 4-methyl-substituted azadiene 27. For compound 19 derived from cycloaddition of 18 with ethyl vinyl ether, facile conversion to the dihydropyridine 21 through loss of EtOH on brief acid treatment was also noted. The 2,4-cis-disubstitution pattern confirmed by X-ray diffraction for the major cycloadduct 29 isolated from the reaction of 27 with styrene provides evidence for the endo mode of cycloaddition in the Diels-Alder reaction of N-phenyl(aryl)-2-cyano-1-azadienes. Calculation of the frontier orbital energies and coefficients, as well as the transition state geometries for the [4 + 2] cycloaddition of N-phenyl-2-cyano-1-azadiene 4 with methyl vinyl ether, styrene, and MVK were carried out at the RHF AM1 level (MOPAC, Version 5.0). The FMO treatment indicates that the reaction of 4 with methyl vinyl ether occurs under LUMO(diene) control, whereas in contrast, the corresponding cycloaddition with MVK occurs preferably under HOMO(diene) control. A high degree of asynchronicity is observed in the calculated transition states for reaction of 4 with the three representative dienophiles. In all cases the transition states leading to the alpha-cycloadducts are lower in energy than those giving the beta

  16. Large natural pH, CO2 and O2 fluctuations in a temperate tidal salt marsh on diel, seasonal, and interannual time scales

    Science.gov (United States)

    Baumann, Hannes; Wallace, Ryan; Tagliaferri, Tristen N.; Gobler, Christopher J.

    2014-01-01

    Coastal marine organisms experience dynamic pH and dissolved oxygen (DO) conditions in their natural habitats, which may impact their susceptibility to long-term anthropogenic changes. Robust characterizations of all temporal scales of natural pH and DO fluctuations in different marine habitats are needed; however, appropriate time series of pH and DO are still scarce. We used multiyear (2008–2012), high-frequency (6 min) monitoring data to quantify diel, seasonal, and interannual scales of pH and DO variability in a productive, temperate tidal salt marsh (Flax Pond, Long Island, US). pHNBS and DO showed strong and similar seasonal patterns, with average (minimum) conditions declining from 8.2 (8.1) and 12.5 (11.4) mg l−1 at the end of winter to 7.6 (7.2) and 6.3 (2.8) mg l−1 in late summer, respectively. Concomitantly, average diel fluctuations increased from 0.22 and 2.2 mg l−1 (February) to 0.74 and 6.5 mg l−1 (August), respectively. Diel patterns were modulated by tides and time of day, eliciting the most extreme minima when low tides aligned with the end of the night. Simultaneous in situ pCO2 measurements showed striking fluctuations between ∼330 and ∼1,200 (early May), ∼2,200 (mid June), and ∼4,000 μatm (end of July) within single tidal cycles. These patterns also indicate that the marsh’s strong net heterotrophy influences its adjacent estuary by ‘outwelling’ acidified and hypoxic water during ebb tides. Our analyses emphasize the coupled and fluctuating nature of pH and DO conditions in productive coastal and estuarine environments, which have yet to be adequately represented by experiments.

  17. Sociocultural patterning of neural activity during self-reflection

    DEFF Research Database (Denmark)

    Ma, Yina; Bang, Dan; Wang, Chenbo

    2014-01-01

    ) in Chinese than in Danish participants. Moreover, the group difference in TPJ activity was mediated by a measure of a cultural value (i.e., interdependence of self-construal). Our findings suggest that individuals in different sociocultural contexts may learn and/or adopt distinct strategies for self...

  18. Activation patterns in forearm muscles during archery shooting.

    Science.gov (United States)

    Ertan, H; Kentel, B; Tümer, S T; Korkusuz, F

    2003-02-01

    A contraction and relaxation strategy with regard to forearm muscles during the release of the bowstring has often been observed during archery, but has not well been described. The purpose of this study was to analyze this strategy in archers with different levels of expertise; elite, beginner and non-archers. Electromyography (EMG) activity of the M. flexor digitorum superficialis and the M. extensor digitorum were recorded at a sampling frequency of 500 Hz, together with a pulse synchronized with the clicker snap, for twelve shots by each subject. Raw EMG records, 1-s before and after the clicker pulse, were rectified, integrated and normalized. The data was then averaged for successive shots of each subject and later for each group. All subjects including non-archers developed an active contraction of the M. extensor digitorum and a gradual relaxation of the M. flexor digitorum superficialis with the fall of the clicker. In elite archers release started about 100 ms after the fall of the clicker, whereas in beginners and non-archers release started after about 200 and 300 ms, respectively. Non-archers displayed a preparation phase involving extensive extensor activity before the release of the bowstring, which was not observed in elite and beginner archers. In conclusion, archers released the bowstring by active contraction of the forearm extensors, whereas a clear relaxation of the forearm flexors affecting the release movement was not observed.

  19. Monitoring spatiotemporal variations of diel radon concentrations in peatland and forest ecosystems based on neural network and regression models.

    Science.gov (United States)

    Evrendilek, Fatih; Denizli, Haluk; Yetis, Hakan; Karakaya, Nusret

    2013-07-01

    Concentrations of outdoor radon-222 ((222)Rn) in temperate grazed peatland and deciduous forest in northwestern Turkey were measured, compared, and modeled using artificial neural networks (ANNs) and multiple nonlinear regression (MNLR) models. The best-performing multilayer perceptron model selected out of 28 ANNs considerably enhanced accuracy metrics in emulating (222)Rn concentrations relative to the MNLR model. The two ecosystems had similar diel patterns with the lowest (222)Rn concentrations in the afternoon and the highest ones near dawn. Mean level (5.1 + 2.5 Bq m(-3) h(-1)) of (222)Rn in the forest was three times smaller than that (15.8 + 9.7 Bq m(-3)) of (222)Rn in the peatland. Mean (222)Rn level had negative and positive relationships with air temperature and relative humidity, respectively.

  20. Diverse patterns of neuroendocrine activity in maltreated children.

    Science.gov (United States)

    Cicchetti, D; Rogosch, F A

    2001-01-01

    Cortisol regulation was investigated in a sample of school-aged maltreated (n = 175) and demographically comparable low-income nonmaltreated (n = 209) children in the context of a day camp research program. Overall group differences between maltreated and nonmaltreated children were not found for average morning or average afternoon cortisol levels. However, significant variations were found that were based on the subtypes of maltreatment that the children had experienced. Maltreated children who had been both physically and sexually abused (as well as neglected or emotionally maltreated) exhibited substantial elevations in morning cortisol levels; children who had high (>1 SD) cortisol levels in both the morning and afternoon were also overrepresented in the multiple abuse group. Developmental timing of maltreatment did not account for these group differences, whereas the severity of sexual abuse was implicated. In contrast to the multiple abuse group, a subgroup of physically abused children showed evidence of a trend toward lower morning cortisol relative to nonmaltreated children with a significantly smaller decrease in cortisol levels from morning to afternoon. The findings are discussed in terms of the diversity of atypical cortisol regulation patterns that are exhibited among maltreated children.

  1. Diel vertical migration of phytoplankton and heterotrophic flagellates in the Gulf of Riga

    Science.gov (United States)

    Olli, Kalle

    1999-12-01

    Vertical distribution of a phototrophic ciliate ( Mesodinium rubrum), autotrophic dinoflagellates ( Peridiniella catenata, Heterocapsa rotundata, Dinophysis acuminata), a cryptomonad ( Teleaulax sp.), a filamentous cyanobacterium ( Aphanizomenon flos-aquae), a non-motile chlorophyte ( Monoraphidium sp.) and two heterotrophic dinoflagellates were studied during two diel periods in spring (May 1-2 and 27-28, 1995) and summer (June 26-27 and July 6-7, 1994) in the southern part of the Gulf of Riga, the Baltic Sea. The two seasons, corresponding to the vernal bloom and summer stage, differed considerably with respect to phytoplankton community, hydrography and vertical distribution of the species. In spring the cells stayed in the upper mixed layer above a strong thermocline at 12-15 m depth, and changes in the vertical distribution were related to surface avoidance in the middle of the day. By using correspondence analysis, the vertical distribution of all the motile species were shown to differ significantly from the non-motile Monoraphidium, but not from each other. The vertical migration was reflected in a higher variability in the depth distribution patterns of the motile species, compared to Monoraphidium. In summer 1994, Aphanizomenon, Dinophysis and Teleaulax showed similar depth distribution patterns during the first period, but different from Mesodinium and the heterotrophic dinoflagellates, while during the second period all the autotrophic species had a species specific depth distribution pattern. Me. rubrum revealed a considerably different depth distribution between the two seasons, characterised by surface accumulation in spring and relatively uniform depth distribution over the whole sampling range (0-30 m) in summer. The results demonstrate different vertical niche separation strategies between species.

  2. Food resource effects on diel movements and body size of cisco in north-temperate lakes.

    Science.gov (United States)

    Ahrenstorff, Tyler D; Hrabik, Thomas R; Jacobson, Peter C; Pereira, Donald L

    2013-12-01

    The movement patterns and body size of fishes are influenced by a host of physical and biological conditions, including temperature and oxygen, prey densities and foraging potential, growth optimization, and predation risk. Our objectives were to (1) investigate variability in vertical movement patterns of cisco (Coregonus artedi) in a variety of inland lakes using hydroacoustics, (2) explore the causal mechanisms influencing movements through the use of temperature/oxygen, foraging, growth, and predation risk models, and (3) examine factors that may contribute to variations in cisco body size by considering all available information. Our results show that cisco vertical movements vary substantially, with different populations performing normal diel vertical migrations (DVM), no DVM, and reverse DVM in lakes throughout Minnesota and northern Wisconsin, USA. Cisco populations with the smallest body size were found in lakes with lower zooplankton densities. These smaller fish showed movements to areas of highest foraging or growth potential during the day and night, despite moving out of preferred temperature and oxygen conditions and into areas of highest predation risk. In lakes with higher zooplankton densities, cisco grew larger and had movements more consistent with behavioral thermoregulation and predator avoidance, while remaining in areas with less than maximum foraging and growth potential. Furthermore, the composition of potential prey items present in each lake was also important. Cisco that performed reverse DVM consumed mostly copepods and cladocerans, while cisco that exhibited normal DVM or no migration consumed proportionally more macro-zooplankton species. Overall, our results show previously undocumented variation in migration patterns of a fish species, the mechanisms underlying those movements, and the potential impact on their growth potential.

  3. Emergent patterns from probabilistic generalizations of lateral activation and inhibition

    Science.gov (United States)

    Kabla, Alexandre

    2016-01-01

    The combination of laterally activating and inhibiting feedbacks is well known to spontaneously generate spatial organization. It was introduced by Gierer and Meinhardt as an extension of Turing's great insight that two reacting and diffusing chemicals can spontaneously drive spatial morphogenesis per se. In this study, we develop an accessible nonlinear and discrete probabilistic model to study simple generalizations of lateral activation and inhibition. By doing so, we identify a range of modes of morphogenesis beyond the familiar Turing-type modes; notably, beyond stripes, hexagonal nets, pores and labyrinths, we identify labyrinthine highways, Kagome lattices, gyrating labyrinths and multi-colour travelling waves and spirals. The results are discussed within the context of Turing's original motivating interest: the mechanisms which underpin the morphogenesis of living organisms. PMID:27170648

  4. Homelessness, mental illness, and criminal activity: examining patterns over time.

    Science.gov (United States)

    Fischer, Sean N; Shinn, Marybeth; Shrout, Patrick; Tsemberis, Sam

    2008-12-01

    This study examined whether street homelessness, sheltered homelessness, and the severity of psychological symptoms predicted non-violent and violent crime among 207 mentally ill participants who were homeless at baseline. Participants were interviewed at 9 time points over 4 years. Hierarchical linear modeling (HLM) was used to examine whether changes in homelessness status and symptom severity predicted changes in criminal activity over time. Results indicated that homelessness both on the streets and in shelters and psychological symptom severity predicted increases in non-violent crime. Sheltered homelessness and symptom severity predicted increases in violent crime, although street homelessness did not. A separate mediational analysis with 181 participants showed that the relationship between diagnosis of a psychotic disorder and both non-violent and violent criminal activity was partially mediated through the severity of psychotic symptoms. Implications for research and intervention are discussed.

  5. Sociocultural patterning of neural activity during self-reflection

    Science.gov (United States)

    Ma, Yina; Bang, Dan; Wang, Chenbo; Allen, Micah; Frith, Chris; Roepstorff, Andreas; Han, Shihui

    2014-01-01

    Western cultures encourage self-construals independent of social contexts, whereas East Asian cultures foster interdependent self-construals that rely on how others perceive the self. How are culturally specific self-construals mediated by the human brain? Using functional magnetic resonance imaging, we monitored neural responses from adults in East Asian (Chinese) and Western (Danish) cultural contexts during judgments of social, mental and physical attributes of themselves and public figures to assess cultural influences on self-referential processing of personal attributes in different dimensions. We found that judgments of self vs a public figure elicited greater activation in the medial prefrontal cortex (mPFC) in Danish than in Chinese participants regardless of attribute dimensions for judgments. However, self-judgments of social attributes induced greater activity in the temporoparietal junction (TPJ) in Chinese than in Danish participants. Moreover, the group difference in TPJ activity was mediated by a measure of a cultural value (i.e. interdependence of self-construal). Our findings suggest that individuals in different sociocultural contexts may learn and/or adopt distinct strategies for self-reflection by changing the weight of the mPFC and TPJ in the social brain network. PMID:22956678

  6. The cortical activation pattern during bilateral arm raising movements

    Science.gov (United States)

    Jang, Sung Ho; Seo, Jung Pyo; Lee, Seung-Hyun; Jin, Sang-Hyun; Yeo, Sang Seok

    2017-01-01

    Bilateral arm raising movements have been used in brain rehabilitation for a long time. However, no study has been reported on the effect of these movements on the cerebral cortex. In this study, using functional near infrared spectroscopy (fNIRS), we attempted to investigate cortical activation generated during bilateral arm raising movements. Ten normal subjects were recruited for this study. fNIRS was performed using an fNIRS system with 49 channels. Bilateral arm raising movements were performed in sitting position at the rate of 0.5 Hz. We measured values of oxyhemoglobin and total hemoglobin in five regions of interest: the primary sensorimotor cortex, premotor cortex, supplementary motor area, prefrontal cortex, and posterior parietal cortex. During performance of bilateral arm raising movements, oxyhemoglobin and total hemoglobin values in the primary sensorimotor cortex, premotor cortex, supplementary motor area, and prefrontal cortex were similar, but higher in these regions than those in the prefrontal cortex. We observed activation of the arm somatotopic areas of the primary sensorimotor cortex and premotor cortex in both hemispheres during bilateral arm raising movements. According to this result, bilateral arm raising movements appeared to induce large-scale neuronal activation and therefore arm raising movements would be good exercise for recovery of brain functions. PMID:28400816

  7. Cerebral Activity Changes in Different Traditional Chinese Medicine Patterns of Psychogenic Erectile Dysfunction Patients

    Directory of Open Access Journals (Sweden)

    Qi Liu

    2015-01-01

    Full Text Available Background. Pattern differentiation is the foundation of traditional Chinese medicine (TCM treatment for erectile dysfunction (ED. This study aims to investigate the differences in cerebral activity in ED patients with different TCM patterns. Methods. 27 psychogenic ED patients and 27 healthy subjects (HS were enrolled in this study. Each participant underwent an fMRI scan in resting state. The fractional amplitude of low-frequency fluctuation (fALFF was used to detect the brain activity changes in ED patients with different patterns. Results. Compared to HS, ED patients showed an increased cerebral activity in bilateral cerebellum, insula, globus pallidus, parahippocampal gyrus, orbitofrontal cortex (OFC, and middle cingulate cortex (MCC. Compared to the patients with liver-qi stagnation and spleen deficiency pattern (LSSDP, the patients with kidney-yang deficiency pattern (KDP showed an increased activity in bilateral brainstem, cerebellum, hippocampus, and the right insula, thalamus, MCC, and a decreased activity in bilateral putamen, medial frontal gyrus, temporal pole, and the right caudate nucleus, OFC, anterior cingulate cortex, and posterior cingulate cortex (P<0.005. Conclusions. The ED patients with different TCM patterns showed different brain activities. The differences in cerebral activity between LSSDP and KDP were mainly in the emotion-related regions, including prefrontal cortex and cingulated cortex.

  8. Adaptive intesration of local resion information to detect fine-scale brain activity patterns

    Institute of Scientific and Technical Information of China (English)

    ZHEN ZongLei; TIAN Jie; ZHANG Hui

    2008-01-01

    With the rapid development of functional magnetic resonance imaging (fMRI) technology, the spatial resolution of fMRI data is continuously growing. This pro-vides us the possibility to detect the fine-scale patterns of brain activities. The es-tablished univariate and multivariate methods to analyze fMRI data mostly focus on detecting the activation blobs without considering the distributed fine-scale pat-terns within the blobs. To improve the sensitivity of the activation detection, in this paper, multivariate statistical method and univariate statistical method are com-bined to discover the fine-grained activity patterns. For one voxel in the brain, a local homogenous region is constructed. Then, time courses from the local ho-mogenous region are integrated with multivariate statistical method. Univariate statistical method is finally used to construct the interests of statistic for that voxel. The approach has explicitly taken into account the structures of both activity pat-terns and existing noise of local brain regions. Therefore, it could highlight the fine-scale activity patterns of the local regions. Experiments with simulated and real fMRI data demonstrate that the proposed method dramatically increases the sensitivity of detection of fine-scale brain activity patterns which contain the subtle information about experimental conditions.

  9. Seasonal variation in daily activity patterns of free-ranging European ground squirrels (Spermophilus citellus)

    NARCIS (Netherlands)

    Everts, LG; Strijkstra, AM; Hut, RA; Hoffmann, IE; Millesi, E

    2004-01-01

    Daily aboveground activity of European ground squirrels (Spermophilus citellus) in their natural habitat was recorded with a visual scanning procedure during the active seasons of 1992 and 1993. Activity patterns were analyzed with respect to time of year and to the animal's reproductive state. Abov

  10. Location, Timing, and Social Structure Patterns Related to Physical Activity Participation in Weight Loss Programs

    Science.gov (United States)

    Gay, Jennifer L.; Trevarthen, Grace

    2013-01-01

    Less than half of the adults in the United States meet national guidelines for physical activity. Physical activity programs can induce short-term improvements in physical activity. To develop effective interventions, researchers and practitioners should consider the timing, location, and social structure patterns of participants. Using a pretest,…

  11. Measuring the Actual Levels and Patterns of Physical Activity/Inactivity of Adults with Intellectual Disabilities

    Science.gov (United States)

    Finlayson, Janet; Turner, Angela; Granat, Malcolm H.

    2011-01-01

    Background: Lack of regular physical activity is a significant risk to health. The aim of this study was to objectively measure the levels and patterns of activity of adults with intellectual disabilities, to inform the design of studies aimed at increasing activity and health in this population. Materials and Methods: Interviews were conducted…

  12. Pattern Discovery for the Design of Face-to-Face Computer-Supported Collaborative Learning Activities

    Science.gov (United States)

    Capponi, Maria Francisca; Nussbaum, Miguel; Marshall, Guillermo; Lagos, Maria Ester

    2010-01-01

    This paper presents a methodology of discovering social action patterns in collaborative learning activities for use in improving activity design, and in particular for restructuring existing designs involving face-to-face social actions to enhance their social dynamics and thus better ensure the achievement of a specified aim. An activity in this…

  13. Location, Timing, and Social Structure Patterns Related to Physical Activity Participation in Weight Loss Programs

    Science.gov (United States)

    Gay, Jennifer L.; Trevarthen, Grace

    2013-01-01

    Less than half of the adults in the United States meet national guidelines for physical activity. Physical activity programs can induce short-term improvements in physical activity. To develop effective interventions, researchers and practitioners should consider the timing, location, and social structure patterns of participants. Using a pretest,…

  14. Heart rate and physical activity patterns in persons with profound intellectual and multiple disabilities.

    NARCIS (Netherlands)

    Waninge, A.; Putten, A.A. van der; Stewart, R.E.; Steenbergen, B.; Wijck, R. van; Schans, C.P. van der

    2013-01-01

    Because physical fitness and health are related to physical activity, it is important to gain an insight into the physical activity levels of persons with profound intellectual and multiple disabilities (PIMD). The purpose of this study was to examine heart rate patterns to measure the activity

  15. Heart rate and physical activity patterns in persons with profound intellectual and multiple disabilities

    NARCIS (Netherlands)

    Waninge, A.; Putten, A.A.J. van der; Stewart, R.E.; Steenbergen, B.; Wijck, R. van; Schans, C.P. van der

    2013-01-01

    Because physical fitness and health are related to physical activity, it is important to gain an insight into the physical activity levels of persons with profound intellectual and multiple disabilities (PIMD). The purpose of this study was to examine heart rate patterns to measure the activity

  16. INFLUENCE OF ENVIRONMENT AND RESOURCE AVAILABILITY ON ACTIVITY PATTERNS OF CAROLLIA CASTANEA (PHYLLOSTOMIDAE) IN PANAMA

    National Research Council Canada - National Science Library

    Wibke Thies; Elisabeth K. V. Kalko; Hans-Ulrich Schnitzler

    2006-01-01

    ...) and abiotic (i.e., weather and lunar cycle) factors. We studied the influence of ambient light, rain, sex, and resource availability on the activity pattern of the neotropical chestnut short-tailed bat (Carollia castanea; Phyllostomidae...

  17. Notes on the activity patterns of 12 species of southern African ...

    African Journals Online (AJOL)

    van Otomys irroratus, en loop parallel met die ritme van die genus. Microtus. Dit word .... ('Buses' are wires carrying ..... pressures, may adopt similar patterns of activity beha- viour. .... Palmer in drawing many of the figures in the paper, and.

  18. Immature pattern of brain activity in Rett syndrome

    DEFF Research Database (Denmark)

    Nielsen, J B; Friberg, L; Lou, H;

    1990-01-01

    69 mL/100 g per minute), and the flows in prefrontal and temporoparietal association regions of the telencephalon were markedly reduced, whereas the primary sensorimotor regions were relatively spared. The flow distribution in Rett syndrome is very similar to the distribution of brain metabolic...... activity in infants of a few months of age. The abnormal regional cerebral blood flow distribution most likely reflects the widespread functional disturbances in the brain of patients with Rett syndrome, whereas computed tomographic and neuropathologic examination only reveal slight changes when compared...

  19. Food Patterns According to Sociodemographics, Physical Activity, Sleeping and Obesity in Portuguese Children

    Directory of Open Access Journals (Sweden)

    Carla Lopes

    2010-03-01

    Full Text Available Our study aimed to describe the association between food patterns and gender, parental education, physical activity, sleeping and obesity in 1976 children aged 5−10 years old. Dietary intake was measured by a semi quantitative food frequency questionnaire; body mass index was calculated and categorized according to the IOTF classification. Factor analysis and generalized linear models were applied to identify food patterns and their associations. TV viewing and male gender were significant positive predictors for fast-food, sugar sweetened beverages and pastry pattern, while a higher level of maternal education and longer sleeping duration were positively associated with a dietary patterns that included fruit and vegetables.

  20. Mining Emerging Patterns for Recognizing Activities of Multiple Users in Pervasive Computing

    DEFF Research Database (Denmark)

    Gu, Tao; Wu, Zhanqing; Wang, Liang

    2009-01-01

    sensor readings in a home environment, and propose a novel pattern mining approach to recognize both single-user and multi-user activities in a unified solution. We exploit Emerging Pattern – a type of knowledge pattern that describes significant changes between classes of data – for constructing our......Understanding and recognizing human activities from sensor readings is an important task in pervasive computing. Existing work on activity recognition mainly focuses on recognizing activities for a single user in a smart home environment. However, in real life, there are often multiple inhabitants...... live in such an environment. Recognizing activities of not only a single user, but also multiple users is essential to the development of practical context-aware applications in pervasive computing. In this paper, we investigate the fundamental problem of recognizing activities for multiple users from...

  1. Objective measurements of daily physical activity patterns and sedentary behaviour in older adults

    DEFF Research Database (Denmark)

    Arnardottir, Nanna Yr; Koster, Annemarie; Van Domelen, Dane R

    2013-01-01

    objectively measured population physical activity (PA) data from older persons is lacking. The aim of this study was to describe free-living PA patterns and sedentary behaviours in Icelandic older men and women using accelerometer.......objectively measured population physical activity (PA) data from older persons is lacking. The aim of this study was to describe free-living PA patterns and sedentary behaviours in Icelandic older men and women using accelerometer....

  2. Fractal patterns of neural activity exist within the suprachiasmatic nucleus and require extrinsic network interactions.

    Science.gov (United States)

    Hu, Kun; Meijer, Johanna H; Shea, Steven A; vanderLeest, Henk Tjebbe; Pittman-Polletta, Benjamin; Houben, Thijs; van Oosterhout, Floor; Deboer, Tom; Scheer, Frank A J L

    2012-01-01

    The mammalian central circadian pacemaker (the suprachiasmatic nucleus, SCN) contains thousands of neurons that are coupled through a complex network of interactions. In addition to the established role of the SCN in generating rhythms of ~24 hours in many physiological functions, the SCN was recently shown to be necessary for normal self-similar/fractal organization of motor activity and heart rate over a wide range of time scales--from minutes to 24 hours. To test whether the neural network within the SCN is sufficient to generate such fractal patterns, we studied multi-unit neural activity of in vivo and in vitro SCNs in rodents. In vivo SCN-neural activity exhibited fractal patterns that are virtually identical in mice and rats and are similar to those in motor activity at time scales from minutes up to 10 hours. In addition, these patterns remained unchanged when the main afferent signal to the SCN, namely light, was removed. However, the fractal patterns of SCN-neural activity are not autonomous within the SCN as these patterns completely broke down in the isolated in vitro SCN despite persistence of circadian rhythmicity. Thus, SCN-neural activity is fractal in the intact organism and these fractal patterns require network interactions between the SCN and extra-SCN nodes. Such a fractal control network could underlie the fractal regulation observed in many physiological functions that involve the SCN, including motor control and heart rate regulation.

  3. Fibrinogen patterns and activity on substrates with tailored hydroxy density.

    Science.gov (United States)

    Rodríguez Hernández, José Carlos; Rico, Patricia; Moratal, David; Monleón Pradas, Manuel; Salmerón-Sánchez, Manuel

    2009-08-11

    The influence of the surface fraction of OH groups on fibrinogen (FG) adsorption is investigated in copolymers of ethyl acrylate and hydroxy ethylacrylate. The amount of adsorbed FG, quantified by western-blotting combined with image analysis of the corresponding bands, decreases as the hydrophilicity of the substrate increases. The influence of substrate wettability on FG conformation and distribution is observed by atomic force microscopy (AFM). The most hydrophobic substrate promotes FG fibrillogenesis, which leads to a fibrin-like appearance in the absence of any thrombin. The degree of FG interconnection was quantified by calculating the fractal dimension of the adsorbed protein from image analysis of the AFM results. The biological activity of the adsorbed FG is correlated to cell adhesion on FG-coated substrates.

  4. Modelling spatial patterns of economic activity in the Netherlands

    CERN Document Server

    Yang, Jung-Hun; Frenken, Koen; Van Oort, Frank; Visser, Evert-Jan

    2012-01-01

    Understanding how spatial configurations of economic activity emerge is important when formulating spatial planning and economic policy. Not only micro-simulation and agent-based model such as UrbanSim, ILUMAS and SIMFIRMS, but also Simon's model of hierarchical concentration have widely applied, for this purpose. These models, however, have limitations with respect to simulating structural changes in spatial economic systems and the impact of proximity. The present paper proposes a model of firm development that is based on behavioural rules such as growth, closure, spin-off and relocation. An important aspect of the model is that locational preferences of firms are based on agglomeration advantages, accessibility of markets and congestion, allowing for a proper description of concentration and deconcentration tendencies. By comparing the outcomes of the proposed model with real world data, we will calibrate the parameters and assess how well the model predicts existing spatial configurations and decide. The...

  5. Patterns of EEG Activity in Individuals with Autism Spectrum Disorders

    Directory of Open Access Journals (Sweden)

    Zhukova M.A.,

    2016-10-01

    Full Text Available The article reviews most recent findings on neural activity in children and adults with autism spectrum disorders (ASD. Most of the studies demonstrate decreased connectivity in cortical regions, excitatory/inhibitory imbalance and atypical processing of language in people with ASD. It is argued that difficulties in semantic integration are connected to selective insensitivity to language, which is manifested in atypical N400 ERP component. In the article we analyze the data suggesting a strong relationship between ASD and epilepsy and argue that the comorbidity is more prevalent among individuals who have cognitive dysfunction. The EEG profile of people with ASD suggests U-shaped alterations with excess in high- and low-frequency EEG bands. We critically analyze the “broken mirror” hypothesis of ASD and demonstrate findings which challenge this theory.

  6. Physical activity patterns, aerobic fitness and body composition in Norwegian children and adolescents : The Physical Activity among Norwegian Children Study

    OpenAIRE

    Kolle, Elin

    2009-01-01

    Regular physical activity is important for children and adolescent’s healthy growth and for their physical, social and mental health. Therefore, comprehensive knowledge is needed on levels and patterns of physical activity, as well as factors influencing physical activity participation. PURPOSE: The overall purpose was to increase the knowledge regarding 9- and 15-year-olds physical activity level, aerobic fitness and their body composition. Further, to gain increased insight w...

  7. A novel pattern mining approach for identifying cognitive activity in EEG based functional brain networks.

    Science.gov (United States)

    Thilaga, M; Vijayalakshmi, R; Nadarajan, R; Nandagopal, D

    2016-06-01

    The complex nature of neuronal interactions of the human brain has posed many challenges to the research community. To explore the underlying mechanisms of neuronal activity of cohesive brain regions during different cognitive activities, many innovative mathematical and computational models are required. This paper presents a novel Common Functional Pattern Mining approach to demonstrate the similar patterns of interactions due to common behavior of certain brain regions. The electrode sites of EEG-based functional brain network are modeled as a set of transactions and node-based complex network measures as itemsets. These itemsets are transformed into a graph data structure called Functional Pattern Graph. By mining this Functional Pattern Graph, the common functional patterns due to specific brain functioning can be identified. The empirical analyses show the efficiency of the proposed approach in identifying the extent to which the electrode sites (transactions) are similar during various cognitive load states.

  8. Conformal Array Pattern Synthesis and Activated Elements Selection Strategy Based on PSOGSA Algorithm

    Directory of Open Access Journals (Sweden)

    Bin Sun

    2015-01-01

    Full Text Available The pattern synthesis and activated element selection for conformal array is investigated based on hybrid particle swarm optimization-gravitational search algorithm (PSOGSA in this paper. With the introduction of PSOGSA algorithm which is a novel hybrid optimization technique, the element excitations are optimized to obtain the desired pattern for conformal array in the case of considering uncoupled and coupled element pattern. Numerical simulation and full-wave electromagnetic calculation verify the advantage and efficiency of our method. Then, a novel strategy of activated element selection based on PSOGSA algorithm is proposed for saving the energy consumption in conformal array.

  9. Radioactive phosphorylation of alcohols to monitor biocatalytic Diels-Alder reactions.

    Directory of Open Access Journals (Sweden)

    Alexander Nierth

    Full Text Available Nature has efficiently adopted phosphorylation for numerous biological key processes, spanning from cell signaling to energy storage and transmission. For the bioorganic chemist the number of possible ways to attach a single phosphate for radioactive labeling is surprisingly small. Here we describe a very simple and fast one-pot synthesis to phosphorylate an alcohol with phosphoric acid using trichloroacetonitrile as activating agent. Using this procedure, we efficiently attached the radioactive phosphorus isotope (32P to an anthracene diene, which is a substrate for the Diels-Alderase ribozyme-an RNA sequence that catalyzes the eponymous reaction. We used the (32P-substrate for the measurement of RNA-catalyzed reaction kinetics of several dye-labeled ribozyme variants for which precise optical activity determination (UV/vis, fluorescence failed due to interference of the attached dyes. The reaction kinetics were analyzed by thin-layer chromatographic separation of the (32P-labeled reaction components and densitometric analysis of the substrate and product radioactivities, thereby allowing iterative optimization of the dye positions for future single-molecule studies. The phosphorylation strategy with trichloroacetonitrile may be applicable for labeling numerous other compounds that contain alcoholic hydroxyl groups.

  10. Diels-Alder Addition of Dicyclopentadiene with Cyclopentadiene in Polar Solvents

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiang-wen; JIANG Qiang; XIONG Zhong-qiang; ZOU Ji-jun; WANG Li; MI Zhen-tao

    2008-01-01

    Diels-Alder addition of dicyclopentadiene and cyclopentadiene in polar solvents has been studied to produce tricyclopentadiene(TCPD)that is a potential high-density fuel precursor.GC and MS analysis shows that the adducts contain two isomers,namely exo-and endo-TCPD.Theoretical simulation shows that although the transition state of endo-TCPD has a lower activation energy,exo-TCPD is thermodynamically preferred.Polar solvents can accelerate the reaction rate and improve the exo/endo ratio of TCPD because the transition state of exo-TCPD has a higher polarity than that of endo-TCPD.The solvent effect follows the order of polarity:benzyl methanol>cyclohexanone>toluene.The conversion rises when the temperature ranges from 120 to 150℃,but the selectivity of TCPD slightly decreases.Increasing the pressure Can improve the conversion but the exo/endo ratio of TCPD is unchanged.The apparent kinetics in different solvents was determined via nonlinear regression.The activation energies are 99.47,101.15,and 107.32 kJ/mol for benzyl methanol,cyclohexanone,and toluene,respectively.The optimal reaction conditions are as follows:benzyl methanol as solvent,temperature 150℃,and pressure 900kPa.After an 11-hour reaction,a conversion of 58.O%,a TCPD selectivity of 95.7%, and an exo/endo ratio of 1/5.3 has been obtained.

  11. Temporal pattern of stimulation modulates reflex bladder activation by pudendal nerve stimulation.

    Science.gov (United States)

    McGee, Meredith J; Grill, Warren M

    2016-11-01

    Reflex bladder activation and inhibition by electrical stimulation of pudendal nerve (PN) afferents is a promising approach to restore control of bladder function in persons with lower urinary tract dysfunction caused by disease or injury. The objective of this work was to determine whether bladder activation evoked by pudendal afferent stimulation was dependent on the temporal pattern of stimulation, and whether specific temporal patterns of stimulation produced larger bladder contractions than constant frequency stimulation. The mean and maximum contraction pressures evoked by different temporal patterns of stimulation of the dorsal genital branch of the pudendal nerve were measured under isovolumetric conditions in α-chloralose anesthetized cats. A computational model of the spinal neural network mediating the pudendo-vesical reflex was used to understand the mechanisms of different bladder responses to patterned stimulation. The pattern of stimulation significantly affected the magnitude of evoked bladder contractions; several temporal patterns were as effective as regular stimulation, but no pattern evoked larger bladder contractions. Random patterns and patterns with pauses, burst-like activity, or high frequency components evoked significantly smaller bladder contractions, supporting the use of regular frequency stimulation in the development of neural prosthetic approaches for bladder control. These results reveal that the bladder response to pudendal afferent stimulation is dependent on the pattern, as well as the frequency, of stimulation. The computational model revealed that the effects of patterned pudendal afferent stimulation were determined by the dynamic properties of excitatory and inhibitory interneurons in the lumbosacral spinal cord. Neurourol. Urodynam. 35:882-887, 2016. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

  12. Genetic and cytological evidence that heterocyst patterning is regulated by inhibitor gradients that promote activator decay.

    Science.gov (United States)

    Risser, Douglas D; Callahan, Sean M

    2009-11-24

    The formation of a pattern of differentiated cells from a group of seemingly equivalent, undifferentiated cells is a central paradigm of developmental biology. Several species of filamentous cyanobacteria differentiate nitrogen-fixing heterocysts at regular intervals along unbranched filaments to form a periodic pattern of two distinct cell types. This patterning has been used to exemplify application of the activator-inhibitor model to periodic patterns in biology. The activator-inhibitor model proposes that activators and inhibitors of differentiation diffuse from source cells to form concentration gradients that in turn mediate patterning, but direct visualization of concentration gradients of activators and inhibitors has been difficult. Here we show that the periodic pattern of heterocysts produced by cyanobacteria relies on two inhibitors of heterocyst differentiation, PatS and HetN, in a manner consistent with the predictions of the activator-inhibitor model. Concentration gradients of the activator, HetR, were observed adjacent to heterocysts, the natural source of PatS and HetN, as well as adjacent to vegetative cells that were manipulated to overexpress a gene encoding either of the inhibitors. Gradients of HetR relied on posttranslational decay of HetR. Deletion of both patS and hetN genes prevented the formation of gradients of HetR, and a derivative of the inhibitors was shown to promote decay of HetR in a concentration-dependent manner. Our results provide strong support for application of the activator-inhibitor model to heterocyst patterning and, more generally, the formation of periodic patterns in biological systems.

  13. Transnational Islamic activism and radicalization : patterns, trends, and prognosticators.

    Energy Technology Data Exchange (ETDEWEB)

    Colbaugh, Richard; Engi, Dennis; LaViolette, Randall A.; Spomer, Judith E.

    2010-06-01

    The research described in this report developed the theoretical and conceptual framework for understanding, recognizing, and anticipating the origins, dynamic mechanisms, perceptions, and social structures of Islamic social reform movements in the Muslim homeland and in diaspora communities. This research has revealed valuable insights into the dynamic mechanisms associated with reform movements and, as such, offers the potential to provide indications and warnings of impending violence. This study produced the following significant findings: (1) A framework for understanding Islamic radicalization in the context of Social Movement Theory was developed and implemented. This framework provides a causal structure for the interrelationships among the myriad features of a social movement. (2) The degree to which movement-related activity shows early diffusion across multiple social contexts is a powerful distinguisher of successful and unsuccessful social movements. Indeed, this measurable appears to have significantly more predictive power than volume of such activity and also more power than various system intrinsics. (3) Significant social movements can occur only if both the intra-context 'infectivity' of the movement exceeds a certain threshold and the inter-context interactions associated with the movement occur with a frequency that is larger than another threshold. Note that this is reminiscent of, and significantly extends, well-known results for epidemic thresholds in disease propagation models. (4) More in-depth content analysis of blogs through the lens of Argumentation Theory has the potential to reveal new insights into radicalization in the context of Social Movement Theory. This connection has the potential to be of value from two important perspectives - first, this connection has the potential to provide more in depth insights into the forces underlying the emergence of radical behavior and second, this connection may provide insights into

  14. Variation in actigraphy-estimated rest-activity patterns by demographic factors.

    Science.gov (United States)

    Mitchell, Jonathan A; Quante, Mirja; Godbole, Suneeta; James, Peter; Hipp, J Aaron; Marinac, Catherine R; Mariani, Sara; Cespedes Feliciano, Elizabeth M; Glanz, Karen; Laden, Francine; Wang, Rui; Weng, Jia; Redline, Susan; Kerr, Jacqueline

    2017-06-26

    Rest-activity patterns provide an indication of circadian rhythmicity in the free-living setting. We aimed to describe the distributions of rest-activity patterns in a sample of adults and children across demographic variables. A sample of adults (N = 590) and children (N = 58) wore an actigraph on their nondominant wrist for 7 days and nights. We generated rest-activity patterns from cosinor analysis (MESOR, acrophase and magnitude) and nonparametric circadian rhythm analysis (IS: interdaily stability; IV: intradaily variability; L5: least active 5-hour period; M10: most active 10-hour period; and RA: relative amplitude). Demographic variables included age, sex, race, education, marital status, and income. Linear mixed-effects models were used to test for demographic differences in rest-activity patterns. Adolescents, compared to younger children, had (1) later M10 midpoints (β = 1.12 hours [95% CI: 0.43, 1.18] and lower M10 activity levels; (2) later L5 midpoints (β = 1.6 hours [95% CI: 0.9, 2.3]) and lower L5 activity levels; (3) less regular rest-activity patterns (lower IS and higher IV); and 4) lower magnitudes (β = -0.95 [95% CI: -1.28, -0.63]) and relative amplitudes (β = -0.1 [95% CI: -0.14, -0.06]). Mid-to-older adults, compared to younger adults (aged 18-29 years), had (1) earlier M10 midpoints (β = -1.0 hours [95% CI: -1.6, -0.4]; (2) earlier L5 midpoints (β = -0.7 hours [95% CI: -1.2, -0.2]); and (3) more regular rest-activity patterns (higher IS and lower IV). The magnitudes and relative amplitudes were similar across the adult age categories. Sex, race and education level rest-activity differences were also observed. Rest-activity patterns vary across the lifespan, and differ by race, sex and education. Understanding population variation in these patterns provides a foundation for further elucidating the health implications of rest-activity patterns across the lifespan.

  15. Active sensing via movement shapes spatiotemporal patterns of sensory feedback.

    Science.gov (United States)

    Stamper, Sarah A; Roth, Eatai; Cowan, Noah J; Fortune, Eric S

    2012-05-01

    Previous work has shown that animals alter their locomotor behavior to increase sensing volumes. However, an animal's own movement also determines the spatial and temporal dynamics of sensory feedback. Because each sensory modality has unique spatiotemporal properties, movement has differential and potentially independent effects on each sensory system. Here we show that weakly electric fish dramatically adjust their locomotor behavior in relation to changes of modality-specific information in a task in which increasing sensory volume is irrelevant. We varied sensory information during a refuge-tracking task by changing illumination (vision) and conductivity (electroreception). The gain between refuge movement stimuli and fish tracking responses was functionally identical across all sensory conditions. However, there was a significant increase in the tracking error in the dark (no visual cues). This was a result of spontaneous whole-body oscillations (0.1 to 1 Hz) produced by the fish. These movements were costly: in the dark, fish swam over three times further when tracking and produced more net positive mechanical work. The magnitudes of these oscillations increased as electrosensory salience was degraded via increases in conductivity. In addition, tail bending (1.5 to 2.35 Hz), which has been reported to enhance electrosensory perception, occurred only during trials in the dark. These data show that both categories of movements - whole-body oscillations and tail bends - actively shape the spatiotemporal dynamics of electrosensory feedback.

  16. Evolution of Daily Activity Patterns from 1971 to 1981: A Study of the Halifax Activity Panel Survey

    Directory of Open Access Journals (Sweden)

    Andrew S. Harvey

    2001-12-01

    similarity measures between character strings, which can be used to measure the similarity of two persons’ daily activities, to measure change over time, or to determine the relative similarity of three or more activity diaries. The results of the research showed that both pure activities and activity-settings identified broadly the same behvioural groupings: employed workers, domestic workers, and weekend activities. The similarity of activity patterns of individuals was greater over the ten-year analysis period than the average similarity of the sample in either 1971 or 1981. The average similarity of activity and activitysetting patterns rose from 1971 to 1981, which contradicts observations that daily routines are becoming more complex and diverse.

  17. Pleiotropic patterning response to activation of Shh signaling in the limb apical ectodermal ridge.

    Science.gov (United States)

    Wang, Chi-Kuang Leo; Tsugane, Mizuyo H; Scranton, Victoria; Kosher, Robert A; Pierro, Louis J; Upholt, William B; Dealy, Caroline N

    2011-05-01

    Sonic hedgehog (Shh) signaling in the limb plays a central role in coordination of limb patterning and outgrowth. Shh expression in the limb is limited to the cells of the zone of polarizing activity (ZPA), located in posterior limb bud mesoderm. Shh is not expressed by limb ectoderm or apical ectodermal ridge (AER), but recent studies suggest a role for AER-Shh signaling in limb patterning. Here, we have examined the effects of activation of Shh signaling in the AER. We find that targeted expression of Shh in the AER activates constitutive Shh signaling throughout the AER and subjacent limb mesoderm, and causes a range of limb patterning defects with progressive severity from mild polydactyly, to polysyndactyly with proximal defects, to severe oligodactyly with phocomelia and partial limb ventralization. Our studies emphasize the importance of control of the timing, level and location of Shh pathway signaling for limb anterior-posterior, proximal-distal, and dorsal-ventral patterning.

  18. A Pattern Mining Approach to Sensor-based Human Activity Recognition

    DEFF Research Database (Denmark)

    Gu, Tao; Wang, Liang; Wu, Zhanqing

    2011-01-01

    Recognizing human activities from sensor readings has recently attracted much research interest in pervasive computing due to its potential in many applications such as assistive living and healthcare. This task is particularly challenging because human activities are often performed in not only...... in real life because activities can be interleaved and performed concurrently in many different ways. In this paper, we propose a novel pattern mining approach to recognize sequential, interleaved and concurrent activities in a unified framework. We exploit Emerging Pattern—a discriminative pattern...... that describes significant changes between classes of data—to identify sensor features for classifying activities. Different from existing learning-based approaches which require different training datasets for building activity models, our activity models are built upon the sequential activity trace only...

  19. Diel behavior of rare earth elements in a mountain stream with acidic to neutral pH

    Science.gov (United States)

    Gammons, C.H.; Wood, S.A.; Nimick, D.A.

    2005-01-01

    Diel (24-h) changes in concentrations of rare earth elements (REE) were investigated in Fisher Creek, a mountain stream in Montana that receives acid mine drainage in its headwaters. Three simultaneous 24-h samplings were conducted at an upstream station (pH = 3.3), an intermediate station (pH = 5.5), and a downstream station (pH = 6.8). The REE were found to behave conservatively at the two upstream stations. At the downstream station, REE partitioned into suspended particles to a degree that varied with the time of day, and concentrations of dissolved REE were 2.9- to 9.4-fold (190% to 830%) higher in the early morning vs. the late afternoon. The decrease in dissolved REE concentrations during the day coincided with a corresponding increase in the concentration of REE in suspended particles, such that diel changes in the total REE concentrations were relatively minor (27% to 55% increase at night). Across the lanthanide series, the heavy REE partitioned into the suspended solid phase to a greater extent than the light REE. Filtered samples from the downstream station showed a decrease in shale-normalized REE concentration across the lanthanide series, with positive anomalies at La and Gd, and a negative Eu anomaly. As the temperature of the creek increased in the afternoon, the slope of the REE profile steepened and the magnitude of the anomalies increased. The above observations are explained by cyclic adsorption of REE onto suspended particles of hydrous ferric and aluminum oxides (HFO, HAO). Conditional partition coefficients for each REE between the suspended solids and the aqueous phase reached a maximum at 1700 hours and a minimum at 0700 hours. This pattern is attributed to diel variations in stream temperature, possibly reinforced by kinetic factors (i.e., slower rates of reaction at night than during the day). Estimates of the enthalpy of adsorption of each REE onto suspended particles based on the field results averaged +82 kJ/mol and are similar in

  20. Diel behavior of rare earth elements in a mountain stream with acidic to neutral pH

    Science.gov (United States)

    Gammons, Christopher H.; Wood, Scott A.; Nimick, David A.

    2005-08-01

    Diel (24-h) changes in concentrations of rare earth elements (REE) were investigated in Fisher Creek, a mountain stream in Montana that receives acid mine drainage in its headwaters. Three simultaneous 24-h samplings were conducted at an upstream station (pH = 3.3), an intermediate station (pH = 5.5), and a downstream station (pH = 6.8). The REE were found to behave conservatively at the two upstream stations. At the downstream station, REE partitioned into suspended particles to a degree that varied with the time of day, and concentrations of dissolved REE were 2.9- to 9.4-fold (190% to 830%) higher in the early morning vs. the late afternoon. The decrease in dissolved REE concentrations during the day coincided with a corresponding increase in the concentration of REE in suspended particles, such that diel changes in the total REE concentrations were relatively minor (27% to 55% increase at night). Across the lanthanide series, the heavy REE partitioned into the suspended solid phase to a greater extent than the light REE. Filtered samples from the downstream station showed a decrease in shale-normalized REE concentration across the lanthanide series, with positive anomalies at La and Gd, and a negative Eu anomaly. As the temperature of the creek increased in the afternoon, the slope of the REE profile steepened and the magnitude of the anomalies increased. The above observations are explained by cyclic adsorption of REE onto suspended particles of hydrous ferric and aluminum oxides (HFO, HAO). Conditional partition coefficients for each REE between the suspended solids and the aqueous phase reached a maximum at 1700 hours and a minimum at 0700 hours. This pattern is attributed to diel variations in stream temperature, possibly reinforced by kinetic factors (i.e., slower rates of reaction at night than during the day). Estimates of the enthalpy of adsorption of each REE onto suspended particles based on the field results averaged +82 kJ/mol and are similar in

  1. Rapid adjustment in chrysanthemum carbohydrate turnover and growth activity to a change in time-of-day application of light and daylength

    DEFF Research Database (Denmark)

    Kjær, Katrine Heinsvig; Poiré, Richard; Ottosen, Carl-Otto;

    2012-01-01

    Abstract. Diel (24 h) rhythms are believed to be of great importance to plant growth and carbohydrate metabolism in fluctuating environments. However, it is unclear how plants that have evolved to experience regular day–night patterns will respond to irregular light environments that disturb...... diurnally-regulated parameters related to growth. In this study, chrysanthemum plants were exposed to a change in the time-of-day application of light followed by short days or long days with a night interruption of light. We observed a clear shift in the diel cycle of sucrose turnover and relative leaf...... expansion, indicating a resetting of these activities with a temporal trigger in the early morning. The starch pool was relatively stable in long-day plants and marginally affected by the change in the time-of-day application in light followed by long days with a night interruption. This was in contrast...

  2. Physical activity patterns of inner-city elementary schoolchildren.

    Science.gov (United States)

    Trost, Stewart G; McCoy, Tara A; Vander Veur, Stephanie S; Mallya, Giridhar; Duffy, Meghan L; Foster, Gary D

    2013-03-01

    This study aimed to objectively measure the physical activity (PA) characteristics of a racially and ethnically diverse sample of inner-city elementary schoolchildren and to examine the influence of sex, race/ethnicity, grade level, and weight status on PA. A total of 470 students in grades 4-6 from six inner-city schools in Philadelphia wore an ActiGraph GT3X+ accelerometer (Actigraph, Pensacola, FL) for up to 7 d. The resultant data were uploaded to a customized Visual Basic EXCEL macro to determine the time spent in sedentary (SED), light-intensity PA (LPA), and moderate- to vigorous-intensity PA (MVPA). On average, students accumulated 48 min of MVPA daily. Expressed as a percentage of monitoring time, students were sedentary for 63% of the time, in LPA 31% of the time, and in MVPA 6% of the time. Across all race/ethnicity and grade level groups, boys exhibited significantly higher levels of MVPA than girls did; fifth-grade boys exhibited significantly lower MVPA levels than fourth- and sixth-grade boys did, and sixth-grade girls exhibited significantly lower MVPA levels than fourth- and fifth-grade girls did. Hispanic children exhibited lower levels of MVPA than children from other racial/ethnic groups did, and overweight and obese children exhibited significantly lower MVPA levels than children in the healthy weight range did. Across the entire sample, only 24.3% met the current public health guidelines for PA. Physical inactivity was significantly greater among females, Hispanics, and overweight and obese students. Fewer than one in four inner-city schoolchildren accumulated the recommended 60 min of MVPA daily. These findings highlight the need for effective and sustainable programs to promote PA in inner-city youth.

  3. Brain activation pattern depends on the strategy chosen by zebra finches to solve an orientation task.

    Science.gov (United States)

    Mayer, Uwe; Bischof, Hans-Joachim

    2012-02-01

    Zebra finches (Taeniopygia guttata) were trained to find food in one of four feeders on the floor of an aviary. This feeder was always in the same place during training and was additionally marked by a distinct pattern. In the test trial the distinctly patterned feeder was interchanged with one of the other feeders, so that the birds had to decide to use either the pattern or the original location for finding food. Half of the birds used one strategy and half used the other. According to the strategy applied, different brain areas were activated, as demonstrated by c-Fos immunohistochemistry. The hippocampus was activated when spatial cues were used, while in birds orienting using the pattern of the feeder, part of the collothalamic (tectofugal) visual system showed stronger activation. The visual wulst of the lemnothalamic (thalamofugal) visual system was activated with both strategies, indicating an involvement in both spatial and pattern-directed orientation. Because the experimental situation was the same for all zebra finches, the activation pattern was only dependent on the strategy that was voluntarily chosen by each of the birds.

  4. Activity pattern and energy expenditure due to physical activity before and during pregnancy in healthy Swedish women.

    Science.gov (United States)

    Lof, Marie; Forsum, Elisabet

    2006-02-01

    Human pregnancy is associated with increased requirements for dietary energy and this increase may be partly offset by reductions in physical activity during gestation. Studies in well-nourished women have shown that the physical activity level (PAL), obtained as the total energy expenditure (TEE) divided by the BMR, decreases in late pregnancy. However, it is not known if this decrease is really caused by reductions in physical activity or if it is the result of decreases in energy expenditure/BMR (the so-called metabolic equivalent, MET) for many activities in late pregnancy. In the present study activity pattern, TEE and BMR were assessed in twenty-three healthy Swedish women before pregnancy as well as in gestational weeks 14 and 32. Activity pattern was assessed using a questionnaire and heart rate recording. TEE was assessed using the doubly labelled water method and BMR was measured by means of indirect calorimetry. When compared to the pre-pregnant value, there was little change in the PAL in gestational week 14 but it was significantly reduced in gestational week 32. Results obtained by means of the questionnaire and by heart rate recording showed that the activity pattern was largely unaffected by pregnancy. The findings support the following conclusion: in a population of well-nourished women where the activity pattern is maintained during pregnancy, the increase in BMR represents approximately the main part of the pregnancy-induced increase in TEE, at least until gestational week 32.

  5. Muscle activation patterns when passively stretching spastic lower limb muscles of children with cerebral palsy.

    Directory of Open Access Journals (Sweden)

    Lynn Bar-On

    Full Text Available The definition of spasticity as a velocity-dependent activation of the tonic stretch reflex during a stretch to a passive muscle is the most widely accepted. However, other mechanisms are also thought to contribute to pathological muscle activity and, in patients post-stroke and spinal cord injury can result in different activation patterns. In the lower-limbs of children with spastic cerebral palsy (CP these distinct activation patterns have not yet been thoroughly explored. The aim of the study was to apply an instrumented assessment to quantify different muscle activation patterns in four lower-limb muscles of children with CP. Fifty-four children with CP were included (males/females n = 35/19; 10.8 ± 3.8 yrs; bilateral/unilateral involvement n =  32/22; Gross Motor Functional Classification Score I-IV of whom ten were retested to evaluate intra-rater reliability. With the subject relaxed, single-joint, sagittal-plane movements of the hip, knee, and ankle were performed to stretch the lower-limb muscles at three increasing velocities. Muscle activity and joint motion were synchronously recorded using inertial sensors and electromyography (EMG from the adductors, medial hamstrings, rectus femoris, and gastrocnemius. Muscles were visually categorised into activation patterns using average, normalized root mean square EMG (RMS-EMG compared across increasing position zones and velocities. Based on the visual categorisation, quantitative parameters were defined using stretch-reflex thresholds and normalized RMS-EMG. These parameters were compared between muscles with different activation patterns. All patterns were dominated by high velocity-dependent muscle activation, but in more than half, low velocity-dependent activation was also observed. Muscle activation patterns were found to be both muscle- and subject-specific (p<0.01. The intra-rater reliability of all quantitative parameters was moderate to good. Comparing RMS-EMG between

  6. Patterns of physical activity in Spanish children: A descriptive pilot study

    OpenAIRE

    Aznar Laín, Susana; Naylor, P. J.; Silva, Pedro; Pérez Ruiz, Margarita; Angulo, T.; Laguna, María; Lara, M. T.; López Chicharro, José

    2011-01-01

    The majority of Spanish adults and children do not engage in enough physical activity to be beneficial for health. There is a need for objective and accurate assessment of the proportion of children meeting the physical activity recommendation for health. Assessing patterns of physical activity both between days (during weekdays and weekend days) and within days is of interest to improve our understanding of the variation in Spanish children's physical activity and to provide efficient interv...

  7. 用反Diels-Alder反应合成天然产物%Natural Products Synthesis by Retro- Diels- Alder Reaction

    Institute of Scientific and Technical Information of China (English)

    刘志煜; 褚新阶; 何菱; 谢益农; 赵联运

    1997-01-01

    Stereospecific introduction of functionalities and substituents on the cyclopentenone ring in the rigid molecule tricyclo [ 5.2.1.02,6] decadineone 1 followed by Retro - Diels - Alder reaction produced the cyclopentenone derivatives 6,7,14,22 and 29, which were converted into chromomoric acid C-I 2, D-I 3, F 4, B 7, 18 invictolide and 6 - epiinvictolide 19 as well as a key intermediate 30for further synthesis of macrocyclic pyrrolizidine alkaloid merenskine 27.%天然产物全合成主要在于发展有效的方法以组成碳骨架和立体控制引入必须的官能团.本文利用刚性分子三环癸二烯酮(1)为原料,立体控制地引入取代基及官能团组成目标分子所需的碳骨架及官能团后进行反Diels-Alder反应释放出取代环戊烯酮,从而进一步合成目标分子克罗莫酸C-I 2,D-I 3,F 4,B 7,蚊皇识别信息索18,6-表蚊皇识别信息素19以及经30获得的32,后者是全合成大环内酯生物碱27的关键中间体.用酶催化反应不对称乙酰化内消旋二醇24c得光学活性单乙酯24d(81%产率,98.3%对映体过量值).24d经过官能团转换可得(+)及(-)1,从(-)1用相似的反应合成了光学活性蚁皇识别信息素(18).

  8. Altered lower leg muscle activation patterns in patients with cerebral palsy during cycling on an ergometer

    Directory of Open Access Journals (Sweden)

    Alves-Pinto A

    2016-06-01

    Full Text Available Ana Alves-Pinto,1,* Tobias Blumenstein,1,* Varvara Turova,1 Renée Lampe1,2 1Research Unit of the Buhl-Strohmaier Foundation for Cerebral Palsy and Paediatric Neuroorthopaedics, Orthopaedic Department, Klinikum rechts der Isar, 2Markus Würth Professorship, Technical University of Munich, Munich, Germany *These authors contributed equally to this work Objective: Cycling on a recumbent ergometer constitutes one of the most popular rehabilitation exercises in cerebral palsy (CP. However, no control is performed on how muscles are being used during training. Given that patients with CP present altered muscular activity patterns during cycling or walking, it is possible that an incorrect pattern of muscle activation is being promoted during rehabilitation cycling. This study investigated patterns of muscular activation during cycling on a recumbent ergometer in patients with CP and whether those patterns are determined by the degree of spasticity and of mobility.Methods: Electromyographic (EMG recordings of lower leg muscle activation during cycling on a recumbent ergometer were performed in 14 adult patients diagnosed with CP and five adult healthy participants. EMG recordings were done with an eight-channel EMG system built in the laboratory. The activity of the following muscles was recorded: Musculus rectus femoris, Musculus biceps femoris, Musculus tibialis anterior, and Musculus gastrocnemius. The degree of muscle spasticity and mobility was assessed using the Modified Ashworth Scale and the Gross Motor Function Classification System, respectively. Muscle activation patterns were described in terms of onset and duration of activation as well as duration of cocontractions.Results: Muscle activation in CP was characterized by earlier onsets, longer periods of activation, a higher occurrence of agonist–antagonist cocontractions, and a more variable cycling tempo in comparison to healthy participants. The degree of altered muscle activation

  9. Implications of climatic seasonality on activity patterns and resource use by sympatric peccaries in northern Pantanal

    Science.gov (United States)

    Hofmann, Gabriel Selbach; Coelho, Igor Pfeifer; Bastazini, Vinicius Augusto Galvão; Cordeiro, José Luís Passos; de Oliveira, Luiz Flamarion Barbosa

    2016-03-01

    We evaluated the effects of climate seasonality from a thermal and water availability perspective on the activity patterns and resource use of Pecari tajacu and Tayassu pecari during wet and dry seasons in the northeastern Brazilian Pantanal. We used camera traps and temperature sensors to record species activity patterns in relation to temperature, established five habitat categories based on flooding intensity and local vegetation characteristics, assessed the activity patterns of each species in dry and wet periods and in artificial water bodies using circular statistical metrics, and calculated niche amplitude and overlap on three axes (temperature, time, and habitat) in both periods. Peccaries shared a strong resemblance in resource use and in their responses to seasonal variations in the tested gradients. The activity patterns of both species exhibited a significant correlation with air temperature on all the evaluated measures, and both species strongly reduced their activity when the air temperature exceeded 35 °C. High temperatures associated with low water availability were most likely responsible for the changes in species activity patterns, which resulted in an increased temporal overlap in habitat use throughout the dry season. However, the peccaries avoided intensively flooded habitats; therefore, the habitat gradient overlap was greater during the wet period. Our results show that an increase in niche overlap on the environmental gradient as a result of climatic seasonality may be partially compensated by a reduction in other niche dimensions. In this case, temporal partitioning appears to be an important, viable mechanism to reduce competition by potentially competing species.

  10. Activity pattern of Sloth Bear Melursus ursinus (Mammalia: Ursidae in Mudumalai Tiger Reserve, Western Ghats, India

    Directory of Open Access Journals (Sweden)

    T. Ramesh

    2013-03-01

    Full Text Available We used information from systematic camera trapping surveys to study activity patterns of sloth bear (Melursus ursinus in Mudumalai Tiger Reserve, Western Ghats during November 2009 to April 2010.Overall 61 independent photographs were obtained from 2600 trap nights. Sloth Bears showed bimodal peaks activities; late evening to midnight and small peak during sunrise. The mean activity time was 21:54 plus or minus 00:46 hrs. Although sloth bears were active throughout the day they exhibited reduced activity during the hottest hours of the day. Sloth Bears might have reduced their activity during the day to avoid the intense heat.Our data demonstrate that use of camera traps in documenting activity patterns can be an effective tool for identifying biological questions of sloth bear ecology for future studies.

  11. Diel biogeochemical processes and their effect on the aqueous chemistry of streams: A review

    Science.gov (United States)

    Nimick, David A.; Gammons, Christopher H.; Parker, Stephen R.

    2011-01-01

    This review summarizes biogeochemical processes that operate on diel, or 24-h, time scales in streams and the changes in aqueous chemistry that are associated with these processes. Some biogeochemical processes, such as those producing diel cycles of dissolved O2 and pH, were the first to be studied, whereas processes producing diel concentration cycles of a broader spectrum of chemical species including dissolved gases, dissolved inorganic and organic carbon, trace elements, nutrients, stable isotopes, and suspended particles have received attention only more recently. Diel biogeochemical cycles are interrelated because the cyclical variations produced by one biogeochemical process commonly affect another. Thus, understanding biogeochemical cycling is essential not only for guiding collection and interpretation of water-quality data but also for geochemical and ecological studies of streams. Expanded knowledge of diel biogeochemical cycling will improve understanding of how natural aquatic environments function and thus lead to better predictions of how stream ecosystems might react to changing conditions of contaminant loading, eutrophication, climate change, drought, industrialization, development, and other factors.

  12. Food preferences, eating patterns, and physical activity among adolescents: correlates of eating disorders symptoms.

    Science.gov (United States)

    French, S A; Perry, C L; Leon, G R; Fulkerson, J A

    1994-06-01

    Food preferences, eating patterns, and physical activity patterns were examined in a cohort of adolescent females and males participating in a longitudinal study of the developmental antecedents of eating disorders. All adolescents (n = 1494) in grades seven through ten in an entire school district completed a survey about their dieting behaviors, eating, and exercise patterns. Principal components analysis showed similar factor structures for food preferences and eating patterns among males and females. Gender differences were present in physical activity patterns. Sports participation was correlated with healthy food preference and was a significant predictor of eating disorders symptoms. Junk food preference was marginally inversely related to eating disorders symptoms in females. Preference for other types of foods and reported intake of foods were not related to eating disorders symptoms. The percent of variance in risk score accounted for by dietary intake and physical activity patterns was small. Psychological and social/environmental variables may explain a larger proportion of the variance in eating disorders risk than the dietary and physical activity variables examined in this study. Implications for understanding the etiology and behavioral expression of eating disorders are discussed.

  13. Diel variation of fish community in sandy beaches of southeastern Brazil

    Directory of Open Access Journals (Sweden)

    Luiz Ricardo Gaelzer

    2008-03-01

    Full Text Available Fish living in coastal waters present behavior patterns ruled by environmental light levels. Diel variations in fish community structure were investigated at Arraial do Cabo surf zone (22º58'S, 42º01'W. From September/2001 to August/2002 monthly sampling consisted of 12 hauls of a beach seine during the day and at night at Praia dos Anjos, Praia Grande and Prainha beaches. Different temporal distribution patterns of the ichthyc community were recorded. At Praia dos Anjos, total richness was higher at night while the average number of species, CPUE, Margalef's richness and Shannon diversity were generally higher during the day. We believe that this pattern was caused by the displacement of some species such as Harengula clupeola,Trachinotus carolinus and Umbrina coroides at night to deeper areas searching for food or for predator avoidance. At Praia Grande and Prainha the average number of species, CPUE, richness and diversity indexes were generally higher at night with the dominant species H. clupeola, Pomatomus saltatrix and Sardinella brasiliensis. It is suggested that the main factor to diel variation is the protection against predators due to darkness, making visualization of the prey difficult, besides the presence of seasonal macroalgae beds at Prainha, which might function as a food area for piscivorous fishes due to the proximity of larger individuals in shallower water especially at night.Peixes que vivem em águas costeiras marinhas exibem modelos de comportamento que são regulados pelos níveis de luz do ambiente. A variação nictemeral na estrutura da comunidade de peixes de zona de arrebentação foi investigada na região de Arraial do Cabo (22º58'S, 42º01'W. Desetembro/2001 a agosto/2002 foram realizadas coletas mensais, sendo efetuadas 12 arrastos utilizando cerco de praia nos períodos diurnos e noturnos na Praia dos Anjos, Praia Grande e Prainha. Diferentes padrões de distribuição da comunidade ictíca foram

  14. Relation Between Muscle Activation Pattern and Pain : An Explorative Study in a Bassists Population

    NARCIS (Netherlands)

    Woldendorp, Kees H.; van de Werk, Pieter; Boonstra, Anne M.; Stewart, Roy E.; Otten, Egbert

    2013-01-01

    Objective: To explore the muscle activation patterns in relation to pain complaints in bassists studied during a musical task. This study was based on the assumption that pain complaints are caused by increased muscle activation during playing or relaxation and/or faster onset of fatigue of muscles.

  15. Comparing Activity Patterns, Biological, and Family Factors in Children with and without Developmental Coordination Disorder

    Science.gov (United States)

    Beutum, Monique Natalie; Cordier, Reinie; Bundy, Anita

    2013-01-01

    The association between motor proficiency and moderate to vigorous physical activity (MVPA) suggests children with developmental coordination disorder (DCD) may be susceptible to inactivity-related conditions such as cardiovascular diseases. The aim of this study was to compare children with and without DCD on physical activity patterns, activity…

  16. Modern Standard Arabic and Rural Palestinian Dialect: Patterns of the Active Participle

    Science.gov (United States)

    Mohaidat, Mohammed Mahmoud Talal

    2017-01-01

    This paper was mainly concerned with analyzing the processes of active participle formation in Modern Standard Arabic (MSA). It also aimed to examine the Rural Palestinian Dialect (RPD) in order to reveal the derivation of the active participle in this dialect and to describe any patterns that might vary from MSA. The study was based on the…

  17. Upper trapezius muscle activation patterns in neck–shoulder pain patients and healthy controls

    NARCIS (Netherlands)

    Voerman, G.E.; Vollenbroek-Hutten, M.M.R.; Hermens, H.J.

    2007-01-01

    This study aimed at investigating whether patients with neck–shoulder complaints from different aetiologies (work-related musculo-skeletal disorders, WMSD; whiplash associated disorders, WAD) show comparable muscle activation patterns, characterised by higher activation and lower relaxation levels o

  18. Individual activity patterns and the meaning of residential environments for inter-ethnic contact

    NARCIS (Netherlands)

    Heringa, Aafke; Bolt, Gideon; Dijst, Martin; van Kempen, Ronald

    2014-01-01

    Past research has indicated that the ethnic composition of residential neighborhoods influences inter-ethnic contact. However, little attention has been paid to individual activity and travel patterns which encompass encounters with others at physical and virtual activity sites, such as sports clubs

  19. Relation Between Muscle Activation Pattern and Pain : An Explorative Study in a Bassists Population

    NARCIS (Netherlands)

    Woldendorp, Kees H.; van de Werk, Pieter; Boonstra, Anne M.; Stewart, Roy E.; Otten, Egbert

    Objective: To explore the muscle activation patterns in relation to pain complaints in bassists studied during a musical task. This study was based on the assumption that pain complaints are caused by increased muscle activation during playing or relaxation and/or faster onset of fatigue of muscles.

  20. Friendship Characteristics and Activity Patterns of Adolescents with an Autism Spectrum Disorder

    Science.gov (United States)

    Kuo, Melissa H.; Orsmond, Gael I.; Cohn, Ellen S.; Coster, Wendy J.

    2013-01-01

    This study compared perceptions of adolescents' friendships between adolescents with an autism spectrum disorder (ASD) and their parents, examined factors associated with friendship qualities, and investigated the adolescents' reports on the activities they did with friends and how activity patterns differed by gender. Ninety-one…

  1. Motives for Using Facebook, Patterns of Facebook Activities, and Late Adolescents' Social Adjustment to College

    Science.gov (United States)

    Yang, Chia-chen; Brown, B. Bradford

    2013-01-01

    Previous studies have confirmed that Facebook, the leading social networking site among young people, facilitates social connections among college students, but the specific activities and motives that foster social adjustment remain unclear. This study examined associations between patterns of Facebook activity, motives for using Facebook, and…

  2. Daily physical activity patterns from hip- and wrist-worn accelerometers

    DEFF Research Database (Denmark)

    Shiroma, Eric J; Schepps, M A; Harezlak, J

    2016-01-01

    .9 (5.5) years) were asked to wear accelerometers in a free-living environment for 7 d at three different wear locations; one on each wrist and one on the right hip. During waking hours, wrist-worn accelerometers consistently produced higher median activity counts, about 5 × higher, as well as wider...... variability compared to hip-worn monitors. However, the shape of the accrual pattern curve over the course of the day for the hip and wrist are similar; there is a spike in activity in the morning, with a prolonged tapering of activity level as the day progresses. The similar patterns of hip and wrist...

  3. Bedtime activities, sleep environment, and sleep/wake patterns of Japanese elementary school children.

    Science.gov (United States)

    Oka, Yasunori; Suzuki, Shuhei; Inoue, Yuich

    2008-01-01

    Bedtime activities, sleep environment, and their impact on sleep/wake patterns were assessed in 509 elementary school children (6-12 years of age; 252 males and 257 females). Television viewing, playing video games, and surfing the Internet had negative impact on sleep/wake parameters. Moreover, presence of a television set or video game in the child's bedroom increased their activity before bedtime. Time to return home later than 8 p.m. from after-school activity also had a negative impact on sleep/wake patterns. Health care practitioners should be aware of the potential negative impact of television, video games, and the Internet before bedtime, and also the possibility that late after-school activity can disturb sleep/wake patterns.

  4. Nocturnal and diurnal activity of armored suckermouth catfish (Loricariidae: Pterygoplichthys associated with wintering Florida manatees (Trichechus manatus latirostris

    Directory of Open Access Journals (Sweden)

    Leo G. Nico

    Full Text Available Several Pterygoplichthys species, members of the Neotropical catfish family Loricariidae, have been widely introduced outside their native ranges. In this paper, I present observations on the diel activity pattern of non-native Pterygoplichthys, tentatively identified as P. disjunctivus, with respect to their attachment and grazing on endangered Florida manatees, Trichechus manatus latirostris. The study was conducted in December 2009 at Volusia Blue Spring, an artesianal spring system in the St. Johns River basin, Florida (USA. Supplemented by information gathered during previous visits to the spring site, this study revealed that adult Pterygoplichthys are active throughout the diel period (day, twilight and night. However, juvenile Pterygoplichthys were largely nocturnal and only at night did they consistently join adults in attaching to manatees. The juveniles generally remain hidden during the day, probably responding to presence of diurnal predators, mainly birds. Differences in diel behaviors among different Pterygoplichthys size classes in Florida are consistent with published observations on loricariids inhabiting clearwater streams within their native ranges.

  5. Nocturnal and diurnal activity of armored suckermouth catfish (Loricariidae: Pterygoplichthys) associated with wintering Florida manatees (Trichechus manatus latirostris)

    Science.gov (United States)

    Nico, Leo G.

    2010-01-01

    Several Pterygoplichthys species, members of the Neotropical catfish family Loricariidae, have been widely introduced outside their native ranges. In this paper, I present observations on the diel activity pattern of non-native Pterygoplichthys, tentatively identified as P. disjunctivus, with respect to their attachment and grazing on endangered Florida manatees, Trichechus manatus latirostris. The study was conducted in December 2009 at Volusia Blue Spring, an artesianal spring system in the St. Johns River basin, Florida (USA). Supplemented by information gathered during previous visits to the spring site, this study revealed that adult Pterygoplichthys are active throughout the diel period (day, twilight and night). However, juvenile Pterygoplichthys were largely nocturnal and only at night did they consistently join adults in attaching to manatees. The juveniles generally remain hidden during the day, probably responding to presence of diurnal predators, mainly birds. Differences in diel behaviors among different Pterygoplichthys size classes in Florida are consistent with published observations on loricariids inhabiting clearwater streams within their native ranges.

  6. Neural Activity Patterns in the Human Brain Reflect Tactile Stickiness Perception

    Science.gov (United States)

    Kim, Junsuk; Yeon, Jiwon; Ryu, Jaekyun; Park, Jang-Yeon; Chung, Soon-Cheol; Kim, Sung-Phil

    2017-01-01

    Our previous human fMRI study found brain activations correlated with tactile stickiness perception using the uni-variate general linear model (GLM) (Yeon et al., 2017). Here, we conducted an in-depth investigation on neural correlates of sticky sensations by employing a multivoxel pattern analysis (MVPA) on the same dataset. In particular, we statistically compared multi-variate neural activities in response to the three groups of sticky stimuli: A supra-threshold group including a set of sticky stimuli that evoked vivid sticky perception; an infra-threshold group including another set of sticky stimuli that barely evoked sticky perception; and a sham group including acrylic stimuli with no physically sticky property. Searchlight MVPAs were performed to search for local activity patterns carrying neural information of stickiness perception. Similar to the uni-variate GLM results, significant multi-variate neural activity patterns were identified in postcentral gyrus, subcortical (basal ganglia and thalamus), and insula areas (insula and adjacent areas). Moreover, MVPAs revealed that activity patterns in posterior parietal cortex discriminated the perceptual intensities of stickiness, which was not present in the uni-variate analysis. Next, we applied a principal component analysis (PCA) to the voxel response patterns within identified clusters so as to find low-dimensional neural representations of stickiness intensities. Follow-up clustering analyses clearly showed separate neural grouping configurations between the Supra- and Infra-threshold groups. Interestingly, this neural categorization was in line with the perceptual grouping pattern obtained from the psychophysical data. Our findings thus suggest that different stickiness intensities would elicit distinct neural activity patterns in the human brain and may provide a neural basis for the perception and categorization of tactile stickiness. PMID:28936171

  7. Extraction and characterization of essential discharge patterns from multisite recordings of spiking ongoing activity.

    Directory of Open Access Journals (Sweden)

    Riccardo Storchi

    Full Text Available BACKGROUND: Neural activation patterns proceed often by schemes or motifs distributed across the involved cortical networks. As neurons are correlated, the estimate of all possible dependencies quickly goes out of control. The complex nesting of different oscillation frequencies and their high non-stationariety further hamper any quantitative evaluation of spiking network activities. The problem is exacerbated by the intrinsic variability of neural patterns. METHODOLOGY/PRINCIPAL FINDINGS: Our technique introduces two important novelties and enables to insulate essential patterns on larger sets of spiking neurons and brain activity regimes. First, the sampling procedure over N units is based on a fixed spike number k in order to detect N-dimensional arrays (k-sequences, whose sum over all dimension is k. Then k-sequences variability is greatly reduced by a hierarchical separative clustering, that assigns large amounts of distinct k-sequences to few classes. Iterative separations are stopped when the dimension of each cluster comes to be smaller than a certain threshold. As threshold tuning critically impacts on the number of classes extracted, we developed an effective cost criterion to select the shortest possible description of our dataset. Finally we described three indexes (C,S,R to evaluate the average pattern complexity, the structure of essential classes and their stability in time. CONCLUSIONS/SIGNIFICANCE: We validated this algorithm with four kinds of surrogated activity, ranging from random to very regular patterned. Then we characterized a selection of ongoing activity recordings. By the S index we identified unstable, moderatly and strongly stable patterns while by the C and the R indices we evidenced their non-random structure. Our algorithm seems able to extract interesting and non-trivial spatial dynamics from multisource neuronal recordings of ongoing and potentially stimulated activity. Combined with time-frequency analysis of

  8. A study of the temperature dependent healing capabilities of new polymers based on Diels-Alder cycloaddition

    NARCIS (Netherlands)

    Kötteritzsch, J.; Hager, M.D.; Schubert, U.S.; Bose, R.K.; Garcia Espallargas, S.J.; Van der Zwaag, S.

    2013-01-01

    Because of its thermal reversibility, the retro-Diels-Alder (RDA) reaction represents an appealing possibility to produce self-healing polymers with well-defined architectures and tunable properties [1]. However, the polymer architecture for which the Diels-Alder (DA) reaction can best be used to

  9. Intra-session repeatability of lower limb muscles activation pattern during pedaling.

    Science.gov (United States)

    Dorel, Sylvain; Couturier, Antoine; Hug, François

    2008-10-01

    Assessment of intra-session repeatability of muscle activation pattern is of considerable relevance for research settings, especially when used to determine changes over time. However, the repeatability of lower limb muscles activation pattern during pedaling is not fully established. Thus, we tested the intra-session repeatability of the activation pattern of 10 lower limb muscles during a sub-maximal cycling exercise. Eleven triathletes participated to this study. The experimental session consisted in a reference sub-maximal cycling exercise (i.e. 150 W) performed before and after a 53-min simulated training session (mean power output=200+/-12 W). Repeatability of EMG patterns was assessed in terms of muscle activity level (i.e. RMS of the mean pedaling cycle and burst) and muscle activation timing (i.e. onset and offset of the EMG burst) for the 10 following lower limb muscles: gluteus maximus (GMax), semimembranosus (SM), Biceps femoris (BF), vastus medialis (VM), rectus femoris (RF), vastus lateralis (VL), gastrocnemius medianus (GM) and lateralis (GL), soleus (SOL) and tibialis anterior (TA). No significant differences concerning the muscle activation level were found between test and retest for all the muscles investigated. Only VM, SOL and TA showed significant differences in muscle activation timing parameters. Whereas ICC and SEM values confirmed this weak repeatability, cross-correlation coefficients suggest a good repeatability of the activation timing parameters for all the studied muscles. Overall, the main finding of this work is the good repeatability of the EMG pattern during pedaling both in term of muscle activity level and muscle activation timing.

  10. Prediction of spatio-temporal patterns of neural activity from pairwise correlations

    OpenAIRE

    Marre, Olivier; Boustani, Sami El; Fregnac, Yves; Destexhe, Alain

    2009-01-01

    We designed a model-based analysis to predict the occurrence of population patterns in distributed spiking activity. Using a maximum entropy principle with a Markovian assumption, we obtain a model that accounts for both spatial and temporal pairwise correlations among neurons. This model is tested on data generated with a Glauber spin-glass system and is shown to correctly predict the occurrence probabilities of spatio-temporal patterns significantly better than Ising models taking into acco...

  11. Adaptive integration of local region information to detect fine-scale brain activity patterns

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    With the rapid development of functional magnetic resonance imaging (fMRI) technology, the spatial resolution of fMRI data is continuously growing. This pro- vides us the possibility to detect the fine-scale patterns of brain activities. The es- tablished univariate and multivariate methods to analyze fMRI data mostly focus on detecting the activation blobs without considering the distributed fine-scale pat- terns within the blobs. To improve the sensitivity of the activation detection, in this paper, multivariate statistical method and univariate statistical method are com- bined to discover the fine-grained activity patterns. For one voxel in the brain, a local homogenous region is constructed. Then, time courses from the local ho- mogenous region are integrated with multivariate statistical method. Univariate statistical method is finally used to construct the interests of statistic for that voxel. The approach has explicitly taken into account the structures of both activity pat- terns and existing noise of local brain regions. Therefore, it could highlight the fine-scale activity patterns of the local regions. Experiments with simulated and real fMRI data demonstrate that the proposed method dramatically increases the sensitivity of detection of fine-scale brain activity patterns which contain the subtle information about experimental conditions.

  12. Quantification of free-living activity patterns using accelerometry in adults with mental illness

    Science.gov (United States)

    Chapman, Justin J.; Roberts, James A.; Nguyen, Vinh T.; Breakspear, Michael

    2017-01-01

    Physical activity is disrupted in many psychiatric disorders. Advances in everyday technologies – such as accelerometers in smart phones – opens exciting possibilities for non-intrusive acquisition of activity data. Successful exploitation of this opportunity requires the validation of analytical methods that can capture the full movement spectrum. The study aim was to demonstrate an analytical approach to characterise accelerometer-derived activity patterns. Here, we use statistical methods to characterize accelerometer-derived activity patterns from a heterogeneous sample of 99 community-based adults with mental illnesses. Diagnoses were screened using the Mini International Neuropsychiatric Interview, and participants wore accelerometers for one week. We studied the relative ability of simple (exponential), complex (heavy-tailed), and composite models to explain patterns of activity and inactivity. Activity during wakefulness was a composite of brief random (exponential) movements and complex (heavy-tailed) processes, whereas movement during sleep lacked the heavy-tailed component. In contrast, inactivity followed a heavy-tailed process, lacking the random component. Activity patterns differed in nature between those with a diagnosis of bipolar disorder and a primary psychotic disorder. These results show the potential of complex models to quantify the rich nature of human movement captured by accelerometry during wake and sleep, and the interaction with diagnosis and health. PMID:28266563

  13. Experimental comparison of phase-shifting fringe projection and statistical pattern projection for active triangulation systems

    Science.gov (United States)

    Lutzke, Peter; Schaffer, Martin; Kühmstedt, Peter; Kowarschik, Richard; Notni, Gunther

    2013-04-01

    Active triangulation systems are widely used for precise and fast measurements. Many different coding strategies have been invented to solve the correspondence problem. The quality of the measurement results depends on the accuracy of the pixel assignments. The most established method uses phase shifted-patterns projected on the scene. This is compared to a method using statistical patterns. In both coding strategies, the number and the spatial frequency of the projected patterns is varied. The measurements and calculations for all presented results were done with exactly the same measurement setup in a narrow time window to avoid any changes and to guarantee identical technical preconditions as well as comparability.

  14. Sensory Patterns, Obesity, and Physical Activity Participation of Children With Autism Spectrum Disorder.

    Science.gov (United States)

    Lawson, Lisa Mische; Foster, Lauren

    2016-01-01

    Obesity is a public health concern for the population in general and for children with autism spectrum disorder (ASD) specifically. The purpose of this study was to understand relationships between sensory patterns, obesity, and physical activity engagement of children with ASD (N = 77) sampled from a specialized community-based swimming program. This retrospective correlational study analyzed program data. Results show that almost half (42.2%) of the children were overweight or obese, and sensory avoiding behaviors were related to higher body mass index (BMI). Children participated in few formal and informal physically active recreation activities. Sensory seeking behaviors were associated with increased participation in informal activities, and higher BMI was associated with less participation in both formal and informal activities. Practitioners should consider sensory processing patterns and BMI when developing community-based programs to promote physical activity of children with ASD. Copyright © 2016 by the American Occupational Therapy Association, Inc.

  15. The activity pattern of shoulder muscles in subjects with and without subacromial impingement

    DEFF Research Database (Denmark)

    Diederichsen, Louise Pyndt; Nørregaard, Jesper; Dyhre-Poulsen, Poul

    2009-01-01

    motion. In the symptomatic shoulder, there was a significantly greater EMG activity during abduction in the supraspinatus and latissimus muscles and less activity in serratus anterior compared to the healthy subjects. During external rotation, there was significantly less activity of the infraspinatus...... and serratus anterior muscles on the symptomatic side compared to the healthy subjects. On the asymptomatic side, the groups showed different muscle activity during external rotation. Our findings of an altered shoulder muscle activity pattern on both the symptomatic and asymptomatic side in patients indicate...... in patients with SI. The aim of the study was to determine and compare the activity pattern of the shoulder muscles in subjects with and without SI. Twenty-one subjects with SI and 20 healthy controls were included. Electromyography (EMG) was assessed from eight shoulder muscles from both shoulders during...

  16. Objective assessment of levels and patterns of physical activity in preschool children

    DEFF Research Database (Denmark)

    Brasholt, Martin; Chawes, Bo; Kreiner-Møller, Eskil

    2013-01-01

    Background:To study in detail levels and patterns of physical activity in preschool children and the effect of gender and body mass index on this activity.Methods:Two hundred and fifty-three children aged 5 years participating in the Copenhagen Prospective Studies on Asthma in Childhood (COPSAC20....... A high body mass index tended to be associated with lower levels of physical activity.Pediatric Research (2013); doi:10.1038/pr.2013.99....

  17. Unsupervised classification of neocortical activity patterns in neonatal and pre-juvenile rodents

    Directory of Open Access Journals (Sweden)

    Nicole eCichon

    2014-05-01

    Full Text Available Flexible communication within the brain, which relies on oscillatory activity, is not confined to adult neuronal networks. Experimental evidence has documented the presence of discontinuous patterns of oscillatory activity already during early development. Their highly variable spatial and time-frequency organization has been related to region specificity. However, it might be equally due to the absence of unitary criteria for classifying the early activity patterns, since they have been mainly characterized by visual inspection. Therefore, robust and unbiased methods for categorizing these discontinuous oscillations are needed for increasingly complex data sets from different labs. Here, we introduce an unsupervised detection and classification algorithm for the discontinuous activity patterns of rodents during early development. For this, firstly time windows with discontinuous oscillations vs. epochs of network silence were identified. In a second step, the major features of detected events were identified and processed by principal component analysis for deciding on their contribution to the classification of different oscillatory patterns. Finally, these patterns were categorized using an unsupervised cluster algorithm. The results were validated on manually characterized neonatal spindle bursts, which ubiquitously entrain neocortical areas of rats and mice, and prelimbic nested gamma spindle bursts. Moreover, the algorithm led to satisfactory results for oscillatory events that, due to increased similarity of their features, were more difficult to classify, e.g. during the pre-juvenile developmental period. Based on a linear classification, the optimal number of features to consider increased with the difficulty of detection. This algorithm allows the comparison of neonatal and pre-juvenile oscillatory patterns in their spatial and temporal organization. It might represent a first step for the unbiased elucidation of activity patterns

  18. Physicochemical Properties and Fatty Acid Profiles of Elaeagnus mollis Diels Nut Oils.

    Science.gov (United States)

    Liang, Shaohua; Yang, Ruinan; Dong, Caiwen; Yang, Qingping

    2015-01-01

    The physicochemical properties, fatty acid profiles, content of tocopherol and sterol of the oils extracted from the nuts of Elaeagnus mollis Diels grown in different regions of China were studied in this work. The results indicated that the Elaeagnus mollis Diels nut oils contained about 0.2% sterols and the tocopherol contents were in the range of 119.6-128.6mg/100g. The nut oils were all rich in unsaturated fatty acids, especially oleic acid and linoleic acid. Furthermore, the main triacylglycerols species of the nut oils were all dilinoleoyl-monoolein (LOL), dioleoyl-monolinoleoyl (OLO) and trilinoleate (LLL). This work might be useful for developing applications for Elaeagnus mollis Diels nut oil.

  19. A domino Knoevenagel hetero-Diels-Alder reaction for the synthesis of polycyclic chromene derivatives and evaluation of their cytotoxicity.

    Science.gov (United States)

    Reddy, B V Subba; Divya, Baddula; Swain, Manisha; Rao, T Prabhakar; Yadav, J S; Vishnu Vardhan, M V P S

    2012-03-01

    A novel octahydrochromeno[4,3-a]xanthen-1(2H)-one derivatives has been prepared using 10mol% dl-proline in ethanol via a domino Knoevenagel hetero-Diels-Alder reaction of alkene-tethered chromene-3-carboxaldehyde with cyclic 1,3-diketones. This is not only the first example on the preparation of highly diastereoselective pentacyclic chromene derivatives from alkene appended chromene-3-carboxaldehyde in one-pot process at ambient temperature but also preliminary evaluation of the cytotoxic activity of these chromene derivatives. Some of these compounds are found to exhibit potent cytotoxicity against two carcinoma cell lines A549 and B-16. Copyright © 2012 Elsevier Ltd. All rights reserved.

  20. Contribution of phenolics and essential oils to the antioxidant and antimicrobial properties of Disporopsis pernyi (Hua) Diels.

    Science.gov (United States)

    Lin, Qisi; Zhang, Ling; Yang, Dongzhi; Chunjie, Zhao

    2014-06-01

    This study describes the characterization of essential oil and phenolic compounds in Disporopsis pernyi (Hua) Diels. The essential oil was analyzed by gas chromatography-mass spectroscopy (GC-MS) and twelve volatile bioactive compounds of D. pernyi were identified. Polyphenols were identified by reverse-phase high-performance liquid chromatography (RP-HPLC) coupled to electrospray ionization time-of-flight mass spectrometry (ESI-TOF-MS) and quantified by ultrahigh-performance liquid chromatography (UPLC). A total of 4 polyphenolic compounds found in extract were identified as rutin, luteolin, quercetin, and betulinic acid. All obtained extracts and the 4 polyphenolic compounds were evaluated for their antimicrobial and antioxidant properties. The results suggested that the phenolic compounds contributed significantly to the antioxidant and antimicrobial activities of the plant.

  1. [Activity patterns and foraging behavior of Apis cerana cerana in the urban gardens in winter].

    Science.gov (United States)

    Chen, Fa-jun; Yang, Qing-qing; Long, Li; Hu, Hong-mei; Duan, Bin; Chen, Wen-nian

    2016-01-01

    Bees and other pollinating insects are the important parts of biodiversity due to their great role in plant reproduction and crop production. To explore the role of city garden in native bees conservation, activity patterns, visiting behaviors and flowering plants with nectar or pollen were recorded in south Sichuan in winter. The results showed that, worker bees (Apis cerana cerana) were active to collect food out hive under suitable weather conditions, the duration of working was long. Peaks of the number of outgoing, entrance and foragers without pollen appeared at 14:00-15:00, and bimodal patterns were observed. While, peak of bees with pollen appeared at 11:00, and a unimodal pattern was observed. Time significantly affected the activity of workers. The workload of honey bees on nectar and pollen collection were different, just less than twenty percent foragers carrying pollen. Temperature and humidity also affected flights of bees to some degree, and bee activities showed similar patterns on different days. However, the activities had diverse characteristics in some time. Though a less number of plants were in flowering, most of them could be utilized by A. cerana cerana, and colonies could effectively get the food resource by behavior adjustment. In addition, visiting activities of bees on the flowers of main garden plants, such as Camellia japonica, showed obvious rhythm. Increasing the flowering plants with nectar and pollen in winter by scientific management of urban gardens would facilitate the creation of suitable habitats for A. cerana cerana and maintaining the wild population.

  2. Activity patterns of free-ranging koalas (Phascolarctos cinereus revealed by accelerometry.

    Directory of Open Access Journals (Sweden)

    Michelle A Ryan

    Full Text Available An understanding of koala activity patterns is important for measuring the behavioral response of this species to environmental change, but to date has been limited by the logistical challenges of traditional field methodologies. We addressed this knowledge gap by using tri-axial accelerometer data loggers attached to VHF radio collars to examine activity patterns of adult male and female koalas in a high-density population at Cape Otway, Victoria, Australia. Data were obtained from 27 adult koalas over two 7-d periods during the breeding season: 12 in the early-breeding season in November 2010, and 15 in the late-breeding season in January 2011. Multiple 15 minute observation blocks on each animal were used for validation of activity patterns determined from the accelerometer data loggers. Accelerometry was effective in distinguishing between inactive (sleeping, resting and active (grooming, feeding and moving behaviors. Koalas were more active during the early-breeding season with a higher index of movement (overall dynamic body acceleration [ODBA] for both males and females. Koalas showed a distinct temporal pattern of behavior, with most activity occurring from mid-afternoon to early morning. Accelerometry has potential for examining fine-scale behavior of a wide range of arboreal and terrestrial species.

  3. Activity Patterns of Free-Ranging Koalas (Phascolarctos cinereus) Revealed by Accelerometry

    Science.gov (United States)

    Ryan, Michelle A.; Whisson, Desley A.; Holland, Greg J.; Arnould, John P. Y.

    2013-01-01

    An understanding of koala activity patterns is important for measuring the behavioral response of this species to environmental change, but to date has been limited by the logistical challenges of traditional field methodologies. We addressed this knowledge gap by using tri-axial accelerometer data loggers attached to VHF radio collars to examine activity patterns of adult male and female koalas in a high-density population at Cape Otway, Victoria, Australia. Data were obtained from 27 adult koalas over two 7-d periods during the breeding season: 12 in the early-breeding season in November 2010, and 15 in the late-breeding season in January 2011. Multiple 15 minute observation blocks on each animal were used for validation of activity patterns determined from the accelerometer data loggers. Accelerometry was effective in distinguishing between inactive (sleeping, resting) and active (grooming, feeding and moving) behaviors. Koalas were more active during the early-breeding season with a higher index of movement (overall dynamic body acceleration [ODBA]) for both males and females. Koalas showed a distinct temporal pattern of behavior, with most activity occurring from mid-afternoon to early morning. Accelerometry has potential for examining fine-scale behavior of a wide range of arboreal and terrestrial species. PMID:24224050

  4. Activity patterns of free-ranging koalas (Phascolarctos cinereus) revealed by accelerometry.

    Science.gov (United States)

    Ryan, Michelle A; Whisson, Desley A; Holland, Greg J; Arnould, John P Y

    2013-01-01

    An understanding of koala activity patterns is important for measuring the behavioral response of this species to environmental change, but to date has been limited by the logistical challenges of traditional field methodologies. We addressed this knowledge gap by using tri-axial accelerometer data loggers attached to VHF radio collars to examine activity patterns of adult male and female koalas in a high-density population at Cape Otway, Victoria, Australia. Data were obtained from 27 adult koalas over two 7-d periods during the breeding season: 12 in the early-breeding season in November 2010, and 15 in the late-breeding season in January 2011. Multiple 15 minute observation blocks on each animal were used for validation of activity patterns determined from the accelerometer data loggers. Accelerometry was effective in distinguishing between inactive (sleeping, resting) and active (grooming, feeding and moving) behaviors. Koalas were more active during the early-breeding season with a higher index of movement (overall dynamic body acceleration [ODBA]) for both males and females. Koalas showed a distinct temporal pattern of behavior, with most activity occurring from mid-afternoon to early morning. Accelerometry has potential for examining fine-scale behavior of a wide range of arboreal and terrestrial species.

  5. [Mammals' camera-trapping in Sierra Nanchititla, Mexico: relative abundance and activity patterns].

    Science.gov (United States)

    Monroy-Vilchis, Octavio; Zarco-González, Martha M; Rodríguez-Soto, Clarita; Soria-Díaz, Leroy; Urios, Vicente

    2011-03-01

    Species conservation and their management depend on the availability of their population behavior and changes in time. This way, population studies include aspects such as species abundance and activity pattern, among others, with the advantage that nowadays new technologies can be applied, in addition to common methods. In this study, we used camera-traps to obtain the index of relative abundance and to establish activity pattern of medium and large mammals in Sierra Nanchititla, Mexico. The study was conducted from December 2003 to May 2006, with a total sampling effort of 4 305 trap-days. We obtained 897 photographs of 19 different species. Nasua narica, Sylvilagus floridanus and Urocyon cinereoargenteus were the most abundant, in agreement with the relative abundance index (RAI, number of independent records/100 trap-days), and according to previous studies with indirect methods in the area. The activity patterns of the species showed that 67% of them are nocturnal, except Odocoileus virginianus, Nasua narica and others. Some species showed differences with previously reported patterns, which are related with seasonality, resources availability, organism sex, principally. The applied method contributed with reliable data about relative abundance and activity patterns.

  6. [Typical Patterns of Neuronal Activity in Relay and Nonspecific Thalamic Nuclei in Patients with Spasmodic Torticollis].

    Science.gov (United States)

    Devetiarov, D A; Semenova, U N; Butiaeva, L I; Sedov, A S

    2015-01-01

    Neuronal activity of 50 neurons in nonspecific (Rt, MD) and relay (Voi, Voa) thalamic nuclei was analyzed. Data were obtained by microelectrode technique during 14 stereotactic operations in patients with spasmodic torticollis. Application of Poincare maps and Gap-statistics allowed to reveal 3 main patterns of neuronal activity: irregular single spikes, low-threshold Ca(2+)-dependent rhythmic (3-5 Hz) bursts and combination of bursts and single spikes. In some cases, grouping (in Voi and Rt nuclei) and long burst (in Voa nucleus) patterns were observed. Grouping pattern consist of low-density groups of spikes with tendency to periodicity in range 1-1.5 Hz. Long burst pattern consist of long dense groups of spikes with random length and invariant interburst intervals. Main numerical estimations of 3 most spread patterns of neuronal activity were obtained by parametric analysis. In results, investigated thalamic nuclei significantly distinguished from each other by characteristics of burst activity but average firing rate of these nuclei hadn't significant differences. These data may be useful for functional identification of thalamic nuclei during stereotactic neurosurgery operation in patients with movement disorders.

  7. Effects of the foot strike pattern on muscle activity and neuromuscular fatigue in downhill trail running.

    Science.gov (United States)

    Giandolini, M; Horvais, N; Rossi, J; Millet, G Y; Morin, J-B; Samozino, P

    2017-08-01

    Minimizing musculo-skeletal damage and fatigue is considered paramount for performance in trail running. Our purposes were to investigate the effects of the foot strike pattern and its variability on (a) muscle activity during a downhill trail run and (b) immediate and delayed neuromuscular fatigue. Twenty-three runners performed a 6.5-km run (1264 m of negative elevation change). Electromyographic activity of lower-limb muscles was recorded continuously. Heel and metatarsal accelerations were recorded to identify the running technique. Peripheral and central fatigue was assessed in knee extensors (KE) and plantar flexors (PF) at Pre-, Post-, and 2 days post downhill run (Post2d). Anterior patterns were associated with (a) higher gastrocnemius lateralis activity and lower tibialis anterior and vastus lateralis activity during the run and (b) larger decreases in KE high-frequency stimulus-evoked torque Post and larger decrements in KE MVC Post2d. High patterns variability during the run was associated with (a) smaller decreases in KE Db100 Post and MVC Post2d and (b) smaller decreases in PF MVC Post and Post2d. Anterior patterns increase the severity of KE peripheral fatigue. However, high foot strike pattern variability during the run reduced acute and delayed neuromuscular fatigue in KE and PF. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  8. Diel Metagenomics and Metatranscriptomics of Elkhorn Slough Hypersaline Microbial Mat

    Science.gov (United States)

    Lee, J.; Detweiler, A. M.; Everroad, R. C.; Bebout, L. E.; Weber, P. K.; Pett-Ridge, J.; Bebout, B.

    2014-12-01

    To understand the variation in gene expression associated with the daytime oxygenic phototrophic and nighttime fermentation regimes seen in hypersaline microbial mats, a contiguous mat piece was subjected to sampling at regular intervals over a 24-hour diel period. Additionally, to understand the impact of sulfate reduction on biohydrogen consumption, molybdate was added to a parallel experiment in the same run. 4 metagenome and 12 metatranscriptome Illumina HiSeq lanes were completed over day / night, and control / molybdate experiments. Preliminary comparative examination of noon and midnight metatranscriptomic samples mapped using bowtie2 to reference genomes has revealed several notable results about the dominant mat-building cyanobacterium Microcoleus chthonoplastes PCC 7420. Dominant cyanobacterium M. chthonoplastes PCC 7420 shows expression in several pathways for nitrogen scavenging, including nitrogen fixation. Reads mapped to M. chthonoplastes PCC 7420 shows expression of two starch storage and utilization pathways, one as a starch-trehalose-maltose-glucose pathway, another through UDP-glucose-cellulose-β-1,4 glucan-glucose pathway. The overall trend of gene expression was primarily light driven up-regulation followed by down-regulation in dark, while much of the remaining expression profile appears to be constitutive. Co-assembly of quality-controlled reads from 4 metagenomes was performed using Ray Meta with progressively smaller K-mer sizes, with bins identified and filtered using principal component analysis of coverages from all libraries and a %GC filter, followed by reassembly of the remaining co-assembly reads and binned reads. Despite having relatively similar abundance profiles in each metagenome, this binning approach was able to distinctly resolve bins from dominant taxa, but also sulfate reducing bacteria that are desired for understanding molybdate inhibition. Bins generated from this iterative assembly process will be used for downstream

  9. Ramadan major nutrient patterns are associated with anthropometric measurements and physical activity in Tehran, Iran

    Directory of Open Access Journals (Sweden)

    Mahdieh Akhoundan

    2015-05-01

    Full Text Available During Ramadan fasting quantity and quality of dietary intake may change. There was no data on nutrient patterns in Ramadan fasting. The purpose of this study was to identify Ramadan major nutrient patterns among those who fast in Tehran, Iran. 510 fasting people aged 18-65 years and BMI 18.5-40 Kg/m2 were recruited in our study by 2-stage cluster sampling method in June-July 2014. Data on the socio-demographic and physical activity level were collected by questionnaire. Usual diet during Ramadan was estimated by valid and reliable food frequency questionnaire. BMI was calculated based on measured height and weight. Three nutrient patterns derived by conducting principal component factor analysis on 30 major nutrients. Micronutrient and fiber pattern which characterized by high intake of vitamin K, total fiber, iron, manganese, magnesium, β-carotene, folate, vitamin B12, potassium and calcium was adversely associated with weight (b=-0.16, P= 0.004. High protein pattern had great loadings on protein, riboflavin, phosphorous and zinc which physical activity level was decreased by tertiles of this pattern (b=0.13, P=0.02. High carbohydrate pattern which presented high positive loadings on carbohydrate and thiamin and negative loading on total fat, poly unsaturated fatty acids and monounsaturated fatty acids was positively associated with BMI (b= 0.12, P=0.03. Adherence to different Ramadan nutrient patterns is associated with weight, BMI and physical activity level. People on high in carbohydrate may have a higher BMI and low micronutrient density diet that should be considered in Ramadan fasting nutrition educational programs.

  10. Remote acoustic monitoring of North Atlantic right whales (Eubalaena glacialis reveals seasonal and diel variations in acoustic behavior.

    Directory of Open Access Journals (Sweden)

    Leanna P Matthews

    Full Text Available Remote acoustic monitoring is a non-invasive tool that can be used to study the distribution, behavior, and habitat use of sound-producing species. The North Atlantic right whale (Eubalaena glacialis is an endangered baleen whale species that produces a variety of stereotyped acoustic signals. One of these signals, the "gunshot" sound, has only been recorded from adult male North Atlantic right whales and is thought to function for reproduction, either as reproductive advertisement for females or as an agonistic signal toward other males. This study uses remote acoustic monitoring to analyze the presence of gunshots over a two-year period at two sites on the Scotian Shelf to determine if there is evidence that North Atlantic right whales may use these locations for breeding activities. Seasonal analyses at both locations indicate that gunshot sound production is highly seasonal, with an increase in the autumn. One site, Roseway West, had significantly more gunshot sounds overall and exhibited a clear diel trend in production of these signals at night. The other site, Emerald South, also showed a seasonal increase in gunshot production during the autumn, but did not show any significant diel trend. This difference in gunshot signal production at the two sites indicates variation either in the number or the behavior of whales at each location. The timing of the observed seasonal increase in gunshot sound production is consistent with the current understanding of the right whale breeding season, and our results demonstrate that detection of gunshots with remote acoustic monitoring can be a reliable way to track shifts in distribution and changes in acoustic behavior including possible mating activities.

  11. Remote acoustic monitoring of North Atlantic right whales (Eubalaena glacialis) reveals seasonal and diel variations in acoustic behavior.

    Science.gov (United States)

    Matthews, Leanna P; McCordic, Jessica A; Parks, Susan E

    2014-01-01

    Remote acoustic monitoring is a non-invasive tool that can be used to study the distribution, behavior, and habitat use of sound-producing species. The North Atlantic right whale (Eubalaena glacialis) is an endangered baleen whale species that produces a variety of stereotyped acoustic signals. One of these signals, the "gunshot" sound, has only been recorded from adult male North Atlantic right whales and is thought to function for reproduction, either as reproductive advertisement for females or as an agonistic signal toward other males. This study uses remote acoustic monitoring to analyze the presence of gunshots over a two-year period at two sites on the Scotian Shelf to determine if there is evidence that North Atlantic right whales may use these locations for breeding activities. Seasonal analyses at both locations indicate that gunshot sound production is highly seasonal, with an increase in the autumn. One site, Roseway West, had significantly more gunshot sounds overall and exhibited a clear diel trend in production of these signals at night. The other site, Emerald South, also showed a seasonal increase in gunshot production during the autumn, but did not show any significant diel trend. This difference in gunshot signal production at the two sites indicates variation either in the number or the behavior of whales at each location. The timing of the observed seasonal increase in gunshot sound production is consistent with the current understanding of the right whale breeding season, and our results demonstrate that detection of gunshots with remote acoustic monitoring can be a reliable way to track shifts in distribution and changes in acoustic behavior including possible mating activities.

  12. Unraveling dynamics of human physical activity patterns in chronic pain conditions

    Science.gov (United States)

    Paraschiv-Ionescu, Anisoara; Buchser, Eric; Aminian, Kamiar

    2013-06-01

    Chronic pain is a complex disabling experience that negatively affects the cognitive, affective and physical functions as well as behavior. Although the interaction between chronic pain and physical functioning is a well-accepted paradigm in clinical research, the understanding of how pain affects individuals' daily life behavior remains a challenging task. Here we develop a methodological framework allowing to objectively document disruptive pain related interferences on real-life physical activity. The results reveal that meaningful information is contained in the temporal dynamics of activity patterns and an analytical model based on the theory of bivariate point processes can be used to describe physical activity behavior. The model parameters capture the dynamic interdependence between periods and events and determine a `signature' of activity pattern. The study is likely to contribute to the clinical understanding of complex pain/disease-related behaviors and establish a unified mathematical framework to quantify the complex dynamics of various human activities.

  13. Niobium(V) chloride as catalyst in Diels-Alder reaction of furan ring

    Energy Technology Data Exchange (ETDEWEB)

    Santos, Deborah A. dos; Rodrigues, Ludmila R.; Arpini, Bruno H.; Lacerda Junior, Valdemar; Greco, Sandro J.; Santos, Reginaldo B. dos; Neto, Alvaro C.; Castro, Eustaquio V.R. de, E-mail: vljuniorqui@gmail.com [Universidade Federal do Espirito Santo (UFES), Vitoria, ES (Brazil). Dept. de Quimica; Romao, Wanderson [Instituto Federal de Educacao, Ciencia e Tecnologia (IFES), Vila Velha, ES (Brazil)

    2014-05-15

    According to the relevant literature, the Diels-Alder reaction of furan without a catalyst can last several weeks and shows a low yield due to the diene’s low reactivity. The use of Lewis acid catalysts or high pressures is described as an effective method for improving the reaction yields. This paper describes our recent study on the use of niobium pentachloride as the catalyst in Diels-Alder reactions between furan and several reactive dienophiles, among which methyl acrylate showed good yields, especially at lower temperatures. Other dienophiles have shown lower yields because of problems such as byproduct formation and the high reversibility of the reaction. (author)

  14. Diel foraging and shelter use of large juvenile brown trout (Salmo trutta) under food satiation

    DEFF Research Database (Denmark)

    Conallin, J.; Jyde, M.; Filrup, K.;

    2012-01-01

    The diel partitioning of juvenile brown trout Salmo trutta foraging behaviour is controlled by a number of factors including predation risk, competition, temperature and food availability. The present study uses PIT-tagging and visual observation to asses the use of shelter and foraging behaviour...... of Danish wild juvenile brown trout (13.5-15.6 cm). The experiment was conducted in a fluvarium and the fish were fed to satiation. It was hypothesised that food satiation would promote nocturnal foraging and increase daytime shelter use. Our results showed a significant difference in diel shelter use...

  15. Stereoselection in Intramolecular Diels-Alder Reactions of 2-Cyano-1-azadienes: Indolizidine and Quinolizidine Synthesis.

    Science.gov (United States)

    Tay, Gidget C; Sizemore, Nicholas; Rychnovsky, Scott D

    2016-07-01

    Progress toward understanding the scope and diastereoselectivity of intramolecular Diels-Alder reactions using 2-cyano-1-azadienes is described herein. The resulting cyanoenamine products are underutilized intermediates in organic synthesis. Assembly of the Diels-Alder precursors was achieved using an improved imine condensation/oxidative cyanation protocol. By this method, several highly substituted indolizidine and quinolizidine architectures were constructed. Quantum mechanical DFT calculations at the B3LYP/6-31+G(d) level of theory were performed for these cyclizations and provide insights into the origins of the observed diastereoselectivities.

  16. User Activity Recognition in Smart Homes Using Pattern Clustering Applied to Temporal ANN Algorithm

    Directory of Open Access Journals (Sweden)

    Serge Thomas Mickala Bourobou

    2015-05-01

    Full Text Available This paper discusses the possibility of recognizing and predicting user activities in the IoT (Internet of Things based smart environment. The activity recognition is usually done through two steps: activity pattern clustering and activity type decision. Although many related works have been suggested, they had some limited performance because they focused only on one part between the two steps. This paper tries to find the best combination of a pattern clustering method and an activity decision algorithm among various existing works. For the first step, in order to classify so varied and complex user activities, we use a relevant and efficient unsupervised learning method called the K-pattern clustering algorithm. In the second step, the training of smart environment for recognizing and predicting user activities inside his/her personal space is done by utilizing the artificial neural network based on the Allen’s temporal relations. The experimental results show that our combined method provides the higher recognition accuracy for various activities, as compared with other data mining classification algorithms. Furthermore, it is more appropriate for a dynamic environment like an IoT based smart home.

  17. Associations between physical activity and health-related fitness - volume versus pattern.

    Science.gov (United States)

    Knaeps, Sara; Bourgois, Jan G; Charlier, Ruben; Mertens, Evelien; Lefevre, Johan

    2017-03-01

    Approximately 3.2 million people die of non-communicable diseases (NCD) each year due to insufficient physical activity. Physical activity guidelines are possibly perceived as too demanding and might thus pose a barrier. We addressed the question if a more stable physical activity pattern is associated with higher levels of health-related fitness than one with high and low intensities, regardless of the physical activity level (PAL). Physical activity was objectively measured in 296 men and women (53.7 ± 8.94 years) with the SenseWear Pro Armband(®). Using this data, the PAL and a Gini index were calculated to report the physical activity pattern. Health-related fitness was expressed as a fitness index. PAL was weakly correlated to health-related fitness (r = 0.38, P fitness index (r = 0.23, P fitness than participants in quartile four, after adjustment for the Gini index. These results suggest that as long as the volume of physical activity is high, health-related fitness will be high as well, independent of the physical activity pattern or variability in intensities throughout the day.

  18. User Activity Recognition in Smart Homes Using Pattern Clustering Applied to Temporal ANN Algorithm.

    Science.gov (United States)

    Bourobou, Serge Thomas Mickala; Yoo, Younghwan

    2015-05-21

    This paper discusses the possibility of recognizing and predicting user activities in the IoT (Internet of Things) based smart environment. The activity recognition is usually done through two steps: activity pattern clustering and activity type decision. Although many related works have been suggested, they had some limited performance because they focused only on one part between the two steps. This paper tries to find the best combination of a pattern clustering method and an activity decision algorithm among various existing works. For the first step, in order to classify so varied and complex user activities, we use a relevant and efficient unsupervised learning method called the K-pattern clustering algorithm. In the second step, the training of smart environment for recognizing and predicting user activities inside his/her personal space is done by utilizing the artificial neural network based on the Allen's temporal relations. The experimental results show that our combined method provides the higher recognition accuracy for various activities, as compared with other data mining classification algorithms. Furthermore, it is more appropriate for a dynamic environment like an IoT based smart home.

  19. Developmental heterogeneity in DNA packaging patterns influences T-cell activation and transmigration.

    Directory of Open Access Journals (Sweden)

    Soumya Gupta

    Full Text Available Cellular differentiation programs are accompanied by large-scale changes in nuclear organization and gene expression. In this context, accompanying transitions in chromatin assembly that facilitates changes in gene expression and cell behavior in a developmental system are poorly understood. Here, we address this gap and map structural changes in chromatin organization during murine T-cell development, to describe an unusual heterogeneity in chromatin organization and associated functional correlates in T-cell lineage. Confocal imaging of DNA assembly in cells isolated from bone marrow, thymus and spleen reveal the emergence of heterogeneous patterns in DNA organization in mature T-cells following their exit from the thymus. The central DNA pattern dominated in immature precursor cells in the thymus whereas both central and peripheral DNA patterns were observed in naïve and memory cells in circulation. Naïve T-cells with central DNA patterns exhibited higher mechanical pliability in response to compressive loads in vitro and transmigration assays in vivo, and demonstrated accelerated expression of activation-induced marker CD69. T-cell activation was characterized by marked redistribution of DNA assembly to a central DNA pattern and increased nuclear size. Notably, heterogeneity in DNA patterns recovered in cells induced into quiescence in culture, suggesting an internal regulatory mechanism for chromatin reorganization. Taken together, our results uncover an important component of plasticity in nuclear organization, reflected in chromatin assembly, during T-cell development, differentiation and transmigration.

  20. The variability of co-activation pattern of antagonist muscles in human infant crawling.

    Science.gov (United States)

    Xiong, Qi L; Wu, Xiao Y; Nong Xiao; Zeng, Si Y; Zheng, Xiao L; Di Wu; Hou, Wen S

    2016-08-01

    Infant crawling is part of normal human gross motor development, and a 4-beat gait that involves rhythmical flexion and extension of limbs and the underlying muscle co-activation of antagonist muscle around the joint. However, detection the co-activation pattern of antagonist muscle are sparse due to the general difficulty of measuring locomotion in human infants. In this paper, sEMG of antagonist muscles and the corresponding kinematics data of limbs were collected when infants were crawling on hands and knees at their self-selected speed. The infant's gross motor developmental status was assessed by the global Gross Motor Function Measure Scale (GMFM-88) as well. The method based on EMG-EMG plots was used to quantify the variability of co-activation pattern of antagonist muscle. After that, we observed that antagonist muscles of upper limb (triceps brachii and biceps brachii) showed less variability of co-activation pattern of muscles than lower limb(quadriceps femoris and hamstrings) during crawling, and this variability was also varied in different crawling phases (stance and swing). Furthermore, we found some varied behaviors in the co-activation patterns of antagonist muscles when gross motor developmental level increased. The preliminary work suggests that such adaptive changes may be related to the adjustment of neuromuscular in the early stage of gross motor development.

  1. Detection of recurrent activation patterns across focal seizures: Application to seizure onset zone identification.

    Science.gov (United States)

    Vila-Vidal, Manel; Principe, Alessandro; Ley, Miguel; Deco, Gustavo; Tauste Campo, Adrià; Rocamora, Rodrigo

    2017-06-01

    We introduce a method that quantifies the consistent involvement of intracranially monitored regions in recurrent focal seizures. We evaluated the consistency of two ictal spectral activation patterns (mean power change and power change onset time) in intracranial recordings across focal seizures from seven patients with clinically marked seizure onset zone (SOZ). We examined SOZ discrimination using both patterns in different frequency bands and periods of interest. Activation patterns were proved to be consistent across more than 80% of recurrent ictal epochs. In all patients, whole-seizure mean activations were significantly higher for SOZ than non-SOZ regions (Pseizure period while gamma band (20-70Hz) achieved the highest discrimination values between SOZ and non-SOZ sites near seizure onset (0-5s). Consistent spectral activation patterns in focal epilepsies discriminate the SOZ with high effect sizes upon appropriate selection of frequency bands and activation periods. The present method may be used to improve epileptogenic identification as well as pinpoint additional regions that are functionally altered during ictal events. Copyright © 2017 International Federation of Clinical Neurophysiology. Published by Elsevier B.V. All rights reserved.

  2. a Three-Step Spatial-Temporal Clustering Method for Human Activity Pattern Analysis

    Science.gov (United States)

    Huang, W.; Li, S.; Xu, S.

    2016-06-01

    How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time) to four dimensions (space, time and semantics). More specifically, not only a location and time that people stay and spend are collected, but also what people "say" for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The results show that the

  3. A THREE-STEP SPATIAL-TEMPORAL-SEMANTIC CLUSTERING METHOD FOR HUMAN ACTIVITY PATTERN ANALYSIS

    Directory of Open Access Journals (Sweden)

    W. Huang

    2016-06-01

    Full Text Available How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time to four dimensions (space, time and semantics. More specifically, not only a location and time that people stay and spend are collected, but also what people “say” for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The

  4. Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat

    DEFF Research Database (Denmark)

    Steunou, Anne-Soisig; Jensen, Sheila I; Brecht, Eric

    2008-01-01

    Nitrogen fixation, a prokaryotic, O(2)-inhibited process that reduces N(2) gas to biomass, is of paramount importance in biogeochemical cycling of nitrogen. We analyzed the levels of nif transcripts of Synechococcus ecotypes, NifH subunit and nitrogenase activity over the diel cycle...... in the microbial mat of an alkaline hot spring in Yellowstone National Park. The results showed a rise in nif transcripts in the evening, with a subsequent decline over the course of the night. In contrast, immunological data demonstrated that the level of the NifH polypeptide remained stable during the night...

  5. Variations in adolescents' motivational characteristics across gender and physical activity patterns: A latent class analysis approach.

    Science.gov (United States)

    Lawler, Margaret; Heary, Caroline; Nixon, Elizabeth

    2017-08-17

    Neglecting to take account of the underlying context or type of physical activity (PA) that underpins overall involvement has resulted in a limited understanding of adolescents' PA participation. The purpose of the present research was to identify male and female adolescents' leisure time PA patterns and examine whether psychological processes derived from self-determination theory differ as a function of the pattern of PA undertaken. Nine hundred ninety-five students (61.2% females, 38.8% males; M age = 13.72 years, SD = 1.25) from eight secondary schools in Dublin, Ireland completed a physical activity recall 7 day diary and measures of intrinsic motivation, competence, relatedness, autonomy and autonomy support. Based on the diary five binary indicators of physical activity were derived reflecting recommended levels of MVPA on a minimum of 3 days, at least three sessions of non-organized physical activity (e.g. jog), team sport, individual sport, and organized non-sport physical activity (e.g. dance). Latent class analysis was used to identify subgroups of adolescents that engaged in similar patterns of physical activity. Profiles of physical activity participation were subsequently compared on motivational characteristics using Kruskal-Wallis tests. Latent class analysis revealed six distinct classes for girls (Organized Run/Swim & Dance/Gym; Organized Dance; Leisure Active Team Sport; Active Individual Sport; Walk/Run/Outdoor games; Non-Participation) and five for boys (Leisure Active Gym; Leisure Active Individual Sport; Active Team Sport; Active Mixed Type; Non-Participation). Significant differences were found between the classes. Girls characterized by participation in team or individual sport, and boys represented by team sport participation demonstrated significantly higher self-determined motivational characteristics relative to other profiles of physical activity. This research offers a nuanced insight into the underlying type of activities that

  6. Normative EMG activation patterns of school-age children during gait.

    Science.gov (United States)

    Agostini, V; Nascimbeni, A; Gaffuri, A; Imazio, P; Benedetti, M G; Knaflitz, M

    2010-07-01

    Gait analysis is widely used in clinics to study walking abnormalities for surgery planning, definition of rehabilitation protocols, and objective evaluation of clinical outcomes. Surface electromyography allows the study of muscle activity non-invasively and the evaluation of the timing of muscle activation during movement. The aim of this study was to present a normative dataset of muscle activation patterns obtained from a large number of strides in a population of 100 healthy children aged 6-11 years. The activity of Tibialis Anterior, Lateral head of Gastrocnemius, Vastus Medialis, Rectus Femoris and Lateral Hamstrings on both lower limbs was analyzed during a 2.5-min walk at free speed. More than 120 consecutive strides were analyzed for each child, resulting in approximately 28,000 strides. Onset and offset instants were reported for each observed muscle. The analysis of a high number of strides for each participant allowed us to obtain the most recurrent patterns of activation during gait, demonstrating that a subject uses a specific muscle with different activation modalities even in the same walk. The knowledge of the various activation patterns and of their statistics will be of help in clinical gait analysis and will serve as reference in the design of future gait studies.

  7. Body composition, nutrient intake and physical activity patterns in young women during Ramadan.

    Science.gov (United States)

    Al-Hourani, H M; Atoum, M F

    2007-10-01

    Muslims abstain from food and fluid between the hours of sunrise to sunset, and usually eat a large meal after sunset and a lighter meal before sunrise. The purpose of this study was to assess body composition, nutrient intake and physical activity patterns during Ramadan fasting. This study was carried out during Ramadan in October 2004. A total of 57 female subjects were recruited from The Hashemite University in Jordan. Body weight, fat percentage, muscle mass, and percentage body water content were measured, and body mass index (BMI) was calculated. Estimated food records over a duration of three days were used to assess the intake of energy, carbohydrates, protein, fat, and sugars before and during Ramadan fasting. Physical activity patterns were determined from a three-day activity diary before and during Ramadan fasting; the amount of physical activity was expressed as the physical activity level. Body weight and BMI decreased significantly during Ramadan fasting. The mean energy and nutrients intake before Ramadan (energy; percent carbohydrates:protein:fat was 1,252; 56:12:33) and during Ramadan (1,171; 56:13:34) were not significantly different. The mean physical activity level was 1.54 before Ramadan and 1.51 during Ramadan, and this was also not significantly different. This study revealed that there was a significant weight loss during Ramadan. Estimates of energy, carbohydrates, protein, fat and sugar did not change, despite the reduction in the number of meals taken. The overall activity patterns remained similar.

  8. Western lowland gorillas (Gorilla gorilla gorilla) change their activity patterns in response to frugivory.

    Science.gov (United States)

    Masi, Shelly; Cipolletta, Chloé; Robbins, Martha M

    2009-02-01

    The most important environmental factor explaining interspecies variation in ecology and sociality of the great apes is likely to be variation in resource availability. Relatively little is known about the activity patterns of western lowland gorillas (Gorilla gorilla gorilla), which inhabit a dramatically different environment from the well-studied mountain gorillas (G. beringei beringei). This study aims to provide a detailed quantification of western lowland gorillas' activity budgets using direct observations on one habituated group in Bai Hokou, Central African Republic. We examined how activity patterns of both sexes are shaped by seasonal frugivory. Activity was recorded with 5-min instantaneous sampling between December 2004 and December 2005. During the high-frugivory period the gorillas spent less time feeding and more time traveling than during the low-frugivory period. The silverback spent less time feeding but more time resting than both females and immatures, which likely results from a combination of social and physiological factors. When compared with mountain gorillas, western lowland gorillas spend more time feeding (67 vs. 55%) and traveling (12 vs. 6.5%), but less time resting (21 vs. 34%) and engaging in social/other activities (0.5 vs. 3.6%). This disparity in activity budgets of western lowland gorillas and mountain gorillas may be explained by the more frugivorous diet and the greater dispersion of food resources experienced by western lowland gorillas. Like other apes, western lowland gorillas change their activity patterns in response to changes in the diet.

  9. Age-related patterns of vigorous-intensity physical activity in youth

    DEFF Research Database (Denmark)

    Corder, Kirsten; Sharp, Stephen J; Atkin, Andrew J

    2016-01-01

    Physical activity declines during youth but most evidence reports on combined moderate and vigorous-intensity physical activity. We investigated how vigorous-intensity activity varies with age. Cross-sectional data from 24,025 participants (5.0-18.0 y; from 20 studies in 10 countries obtained 2008...... for comparison. Interactions were used to investigate whether the age/vigorous-activity association differed by sex, weight status, ethnicity, maternal education and region. A 6.9% (95% CI 6.2, 7.5) relative reduction in mean vigorous-intensity activity with every year of age was observed; for moderate activity......-2010) providing ≥ 1 day accelerometer data (International Children's Accelerometry Database (ICAD)). Linear regression was used to investigate age-related patterns in vigorous-intensity activity; models included age (exposure), adjustments for monitor wear-time and study. Moderate-intensity activity was examined...

  10. Using visual information analysis to explore complex patterns in the activity of designers

    DEFF Research Database (Denmark)

    Cash, Philip; Stanković, Tino; Štorga, Mario

    2014-01-01

    the temporality of interrelations between interlinked variables and, as such, can be applied to a range of datasets. By providing a statistical analysis of the networks’ growth the proposed method allows for the modelling of complex patterns of activity. Throughout, the method is demonstrated with respect......The analysis of complex interlinked datasets poses a significant problem for design researchers. This is addressed by proposing an information visualisation method for analysing patterns of design activity, qualitatively and quantitatively, with respect to time. This method visualises...... to a fully realised example of information seeking activity. The core contribution of the proposed method is in supporting the analysis of activity with respect to both macro and micro level temporal interactions between variables....

  11. Detecting stable phase structures in EEG signals to classify brain activity amplitude patterns

    Institute of Scientific and Technical Information of China (English)

    Yusely RUIZ; Guang LI; Walter J. FREEMAN; Eduardo GONZALEZ

    2009-01-01

    Obtaining an electrocorticograms (ECoG) signal requires an invasive procedure in which brain activity is recorded from the cortical surface. In contrast, obtaining electroencephalograms (EEG) recordings requires the non-invasive procedure of recording the brain activity from the scalp surface, which allows EEG recordings to be performed more easily on healthy humans. In this work, a technique previously used to study spatial-temporal patterns of brain activity on animal ECoG was adapted for use on EEG. The main issues are centered on solving the problems introduced by the increment on the interelectrode distance and the procedure to detect stable frames. The results showed that spatial patterns of beta and gamma activity can also be extracted from the EEG signal by using stable frames as time markers for feature extraction. This adapted technique makes it possible to take advantage of the cognitive and phenomenological awareness of a normal healthy subject.

  12. An Active Region Model for Capturing Fractal Flow Patterns inUnsaturated Soils: Model Development

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Hui-Hai; Zhang, R.; Bodvarsson, Gudmundur S.

    2005-06-11

    Preferential flow commonly observed in unsaturated soils allows rapid movement of solute from the soil surface or vadose zone to the groundwater, bypassing a significant volume of unsaturated soil and increasing the risk of groundwater contamination. A variety of evidence indicates that complex preferential patterns observed from fields are fractals. In this study, we developed a relatively simple active region model to incorporate the fractal flow pattern into the continuum approach. In the model, the flow domain is divided into active and inactive regions. Flow occurs preferentially in the active region (characterized by fractals), and inactive region is simply bypassed. A new constitutive relationship (the portion of the active region as a function of saturation) was derived. The validity of the proposed model is demonstrated by the consistency between field observations and the new constitutive relationship.

  13. Differential patterns of prefrontal MEG activation during verbal & visual encoding and retrieval.

    Directory of Open Access Journals (Sweden)

    Garreth Prendergast

    Full Text Available The spatiotemporal profile of activation of the prefrontal cortex in verbal and non-verbal recognition memory was examined using magnetoencephalography (MEG. Sixteen neurologically healthy right-handed participants were scanned whilst carrying out a modified version of the Doors and People Test of recognition memory. A pattern of significant prefrontal activity was found for non-verbal and verbal encoding and recognition. During the encoding, verbal stimuli activated an area in the left ventromedial prefrontal cortex, and non-verbal stimuli activated an area in the right. A region in the left dorsolateral prefrontal cortex also showed significant activation during the encoding of non-verbal stimuli. Both verbal and non-verbal stimuli significantly activated an area in the right dorsomedial prefrontal cortex and the right anterior prefrontal cortex during successful recognition, however these areas showed temporally distinct activation dependent on material, with non-verbal showing activation earlier than verbal stimuli. Additionally, non-verbal material activated an area in the left anterior prefrontal cortex during recognition. These findings suggest a material-specific laterality in the ventromedial prefrontal cortex during encoding for verbal and non-verbal but also support the HERA model for verbal material. The discovery of two process dependent areas during recognition that showed patterns of temporal activation dependent on material demonstrates the need for the application of more temporally sensitive techniques to the involvement of the prefrontal cortex in recognition memory.

  14. Physical Activity Pattern of Malaysian Preschoolers: Environment, Barriers, and Motivators for Active Play.

    Science.gov (United States)

    Lee, Shoo Thien; Wong, Jyh Eiin; Ong, Wei Wen; Ismail, Mohd Noor; Deurenberg, Paul; Poh, Bee Koon

    2016-07-01

    Children's physical activity has been correlated with child characteristics and social or physical environment. This study aimed to compare preschoolers' physical activity among various sociodemographic characteristics and to determine barriers, motivators, and environmental factors for active play. A total of 835 preschoolers were included in this analysis. Time spent on active play, quiet play, and screen time was reported by parents. Boys spent significantly more time on active play and screen time than girls. Time spent on quiet play was highest in East Coast Peninsular Malaysia and lowest in Sarawak. Some 40% of children achieved active play recommendation while 27% exceeded daily screen time recommendation. Most parents reported that their child played actively in the house area; and that the main barrier and motivator to active play were safety and child's enjoyment, respectively. These findings demonstrate that sociodemographic characteristics and environment should be considered in designing physical activity intervention programs.

  15. Nanoscale Patterning of Antigen on Silicon Substrate to Examine Mast Cell Activation

    Science.gov (United States)

    2002-04-01

    Examine Mast Cell Activation DISTRIBUTION: Approved for public release, distribution unlimited This paper is part of the following report: TITLE...Materials Research Society N4.3 Nanoscale Patterning of Antigen on Silicon Substrate to Examine Mast Cell Activation Reid N. Orth", Min Wu2 , Theodore G...nanometer scale to spatially control the stimulation of specific immunoreceptors on RBL mast cells . This work was motivated by previous research to

  16. Extracting Extensor Digitorum Communis Activation Patterns using High-Density Surface Electromyography

    Directory of Open Access Journals (Sweden)

    Xiaogang eHu

    2015-10-01

    Full Text Available The extensor digitorum communis muscle plays an important role in hand dexterity during object manipulations. This multi-tendinous muscle is believed to be controlled through separate motoneuron pools, thereby forming different compartments that control individual digits. However, due to the complex anatomical variations across individuals and the flexibility of neural control strategies, the spatial activation patterns of the extensor digitorum communis compartments during individual finger extension have not been fully tracked under different task conditions.The objective of this study was to quantify the global spatial activation patterns of the extensor digitorum communis using high-density (7×9 surface electromyogram (EMG recordings. The muscle activation map (based on the root mean square of the EMG was constructed when subjects performed individual four finger extensions at the metacarpophalangeal joint, at different effort levels and under different finger constraints (static and dynamic. Our results revealed distinct activation patterns during individual finger extensions, especially between index and middle finger extensions, although the activation between ring and little finger extensions showed strong covariance. The activation map was relatively consistent at different muscle contraction levels and for different finger constraint conditions. We also found that distinct activation patterns were more discernible in the proximal-distal direction than in the radial-ulnar direction. The global spatial activation map utilizing surface grid EMG of the extensor digitorum communis muscle provides information for localizing individual compartments of the extensor muscle during finger extensions. This is of potential value for identifying more selective control input for assistive devices. Such information can also provide a basis for understanding hand impairment in individuals with neural disorders.

  17. Seasonal activity patterns and diet divergence of three sympatric Afrotropical tortoise species (genus Kinixys)

    NARCIS (Netherlands)

    Luiselli, Luca

    2003-01-01

    Three species of hinge-back tortoises ( (Kinixys belliana nogueyi, Kinixys erosa, Kinixys homeana) are found in simpatry in the rainforests of the Niger Delta, southern Nigeria (west Africa). The seasonal activity patterns and food habits of these tortoises are studied in the present paper. K. erosa

  18. Abnormal fMRI Activation Pattern during Story Listening in Individuals with Down Syndrome

    Science.gov (United States)

    Reynolds Losin, Elizabeth A.; Rivera, Susan M.; O'Hare, Elizabeth D.; Sowell, Elizabeth R.; Pinter, Joseph D.

    2009-01-01

    Down syndrome is characterized by disproportionately severe impairments of speech and language, yet little is known about the neural underpinnings of these deficits. We compared fMRI activation patterns during passive story listening in 9 young adults with Down syndrome and 9 approximately age-matched, typically developing controls. The typically…

  19. Advance cueing produces enhanced action-boundary patterns of spike activity in the sensorimotor striatum.

    Science.gov (United States)

    Barnes, Terra D; Mao, Jian-Bin; Hu, Dan; Kubota, Yasuo; Dreyer, Anna A; Stamoulis, Catherine; Brown, Emery N; Graybiel, Ann M

    2011-04-01

    One of the most characteristic features of habitual behaviors is that they can be evoked by a single cue. In the experiments reported here, we tested for the effects of such advance cueing on the firing patterns of striatal neurons in the sensorimotor striatum. Rats ran in a T-maze with instruction cues about the location of reward given at the start of the runs. This advance cueing about reward produced a highly augmented task-bracketing pattern of activity at the beginning and end of procedural task performance relative to the patterns found previously with midtask cueing. Remarkably, the largest increase in activity early during the T-maze runs was not associated with the instruction cues themselves, the earliest predictors of reward; instead, the highest peak of early activity was associated with the beginning of the motor period of the task. We suggest that the advance cueing, reducing midrun demands for decision making but adding a working-memory load, facilitated chunking of the maze runs as executable scripts anchored to sensorimotor aspects of the task and unencumbered by midtask decision-making demands. Our findings suggest that the acquisition of stronger task-bracketing patterns of striatal activity in the sensorimotor striatum could reflect this enhancement of behavioral chunking. Deficits in such representations of learned sequential behaviors could contribute to motor and cognitive problems in a range of neurological disorders affecting the basal ganglia, including Parkinson's disease.

  20. An Ecological Momentary Assessment of the Physical Activity and Sedentary Behaviour Patterns of University Students

    Science.gov (United States)

    Rouse, Peter C.; Biddle, Stuart J. H.

    2010-01-01

    Objective: We used ecological momentary assessment to understand the physical activity and sedentary behaviour patterns of university students. Study design: Cross sectional, opportunistic sample from a university in the English midlands. Methods: Ecological momentary assessment diaries were completed every 15 minutes across two days. The sample…

  1. Dietary patterns as compared with physical activity in relation to metabolic syndrome among Chinese adults

    NARCIS (Netherlands)

    He, Y.; Li, Y.; Lai, J.; Wang, D.; Zhang, J.; Fu, P.; Yang, X.; Qi, L.

    2013-01-01

    Aims: To examine the nationally-representative dietary patterns and their joint effects with physical activity on the likelihood of metabolic syndrome (MS) among 20,827 Chinese adults. Methods and results: CNNHS was a nationally representative cross-sectional observational study. Metabolic syndrome

  2. Dietary patterns as compared with physical activity in relation to metabolic syndrome among Chinese adults

    NARCIS (Netherlands)

    He, Y.; Li, Y.; Lai, J.; Wang, D.; Zhang, J.; Fu, P.; Yang, X.; Qi, L.

    2013-01-01

    Aims: To examine the nationally-representative dietary patterns and their joint effects with physical activity on the likelihood of metabolic syndrome (MS) among 20,827 Chinese adults. Methods and results: CNNHS was a nationally representative cross-sectional observational study. Metabolic syndrome

  3. Changes in enzymes activity, substrate utilization pattern and diversity of soil microbial communities under cadmium pollution

    Institute of Scientific and Technical Information of China (English)

    Muhammad Akmal; WANG Hai-zhen; WU Jian-jun; XU Jian-ming; XU De-fu

    2005-01-01

    Heavy metal pollution has received increasing attention in recent years mainly because of the public awareness of environmental issues. In this study we have evaluated the effect of cadmium(Cd) on enzymes activity, substrate utilization pattern and diversity of microbial communities in soil spiked with 0, 20, 40, 60, 80, and 100 mg/kg Cd, during 60 d of incubation at 25℃. Enzyme activities determined at 0, 15, 30, 45, and 60 d after heavy metal application(DAA) showed marked declines for various Cd treatments, and up to 60 DAA, 100 mg/kg Cd resulted in 50.1%, 47.4%, and 39.8 % decreases in soil urease, acid phosphatase and dehydrogenase activities,respectively to control. At 60 DAA, substrate utilization pattern of soil microbial communities determined by inoculating Biolog ECO plates indicated that Cd addition had markedly inhibited the functional activity of soil microbial communities and multivariate analysis of sole carbon source utilization showed significantly different utilization patterns for 80 and 100 mg/kg Cd treatments. The structural diversity of soil microbial communities assessed by PCR-DGGE method at 60 DAA, illustrated that DGGE patterns in soil simplified with increasing Cd concentration, and clustering of DGGE profiles for various Cd treatments revealed that they had more than 50% difference with that of control.

  4. Abnormal fMRI Activation Pattern during Story Listening in Individuals with Down Syndrome

    Science.gov (United States)

    Reynolds Losin, Elizabeth A.; Rivera, Susan M.; O'Hare, Elizabeth D.; Sowell, Elizabeth R.; Pinter, Joseph D.

    2009-01-01

    Down syndrome is characterized by disproportionately severe impairments of speech and language, yet little is known about the neural underpinnings of these deficits. We compared fMRI activation patterns during passive story listening in 9 young adults with Down syndrome and 9 approximately age-matched, typically developing controls. The typically…

  5. Centrally patterned rhythmic activity integrated by a peripheral circuit linking multiple oscillators.

    Science.gov (United States)

    Jellies, John; Kueh, Daniel

    2012-08-01

    The central pattern generator for heartbeat in the medicinal leech, Hirudo generates rhythmic activity conveyed by heart excitor motor neurons in segments 3-18 to coordinate the bilateral tubular hearts and side vessels. We focus on behavior and the influence of previously un-described peripheral nerve circuitry. Extracellular recordings from the valve junction (VJ) where afferent vessels join the heart tube were combined with optical recording of contractions. Action potential bursts at VJs occurred in advance of heart tube and afferent vessel contractions. Transections of nerves were performed to reduce the output of the central pattern generator reaching the heart tube. Muscle contractions persisted but with a less regular rhythm despite normal central pattern generator rhythmicity. With no connections between the central pattern generator and heart tube, a much slower rhythm became manifest. Heart excitor neuron recordings showed that peripheral activity might contribute to the disruption of centrally entrained contractions. In the model presented, peripheral activity would normally modify the activity actually reaching the muscle. We also propose that the fundamental efferent unit is not a single heart excitor neuron, but rather is a functionally defined unit of about three adjacent motor neurons and the peripheral assembly of coupled peripheral oscillators.

  6. Brain activity patterns induced by interrupting the cognitive processes with online advertising.

    Science.gov (United States)

    Rejer, Izabela; Jankowski, Jarosław

    2017-06-12

    As a result of the increasing role of online advertising and strong competition among advertisers, intrusive techniques are commonly used to attract web users' attention. Moreover, since marketing content is usually delivered to the target audience when they are performing typical online tasks, like searching for information or reading online content, its delivery interrupts the web user's current cognitive process. The question posed by many researchers in the field of online advertising is: how should we measure the influence of interruption of cognitive processes on human behavior and emotional state? Much research has been conducted in this field; however, most of this research has focused on monitoring activity in the simulated environment, or processing declarative responses given by users in prepared questionnaires. In this paper, a more direct real-time approach is taken, and the effect of the interruption on a web user is analyzed directly by studying the activity of his brain. This paper presents the results of an experiment that was conducted to find the brain activity patterns associated with interruptions of the cognitive process by showing internet advertisements during a text-reading task. Three specific aspects were addressed in the experiment: individual patterns, the consistency of these patterns across trials, and the intra-subject correlation of the individual patterns. Two main effects were observed for most subjects: a drop in activity in the frontal and prefrontal cortical areas across all frequency bands, and significant changes in the frontal/prefrontal asymmetry index.

  7. Effects of Cooperative Group Work Activities on Pre-School Children's Pattern Recognition Skills

    Science.gov (United States)

    Tarim, Kamuran

    2015-01-01

    The aim of this research is twofold; to investigate the effects of cooperative group-based work activities on children's pattern recognition skills in pre-school and to examine the teachers' opinions about the implementation process. In line with this objective, for the study, 57 children (25 girls and 32 boys) were chosen from two private schools…

  8. The effect of walking aids on muscle activation patterns during walking in stroke patients

    NARCIS (Netherlands)

    Buurke, Jaap; Hermens, Hermanus J.; Erren-Wolters, C.V.; Nene, A.V.

    2005-01-01

    The purpose of this study was to investigate changes in muscle activation patterns with respect to timing and amplitude that occur when subjects with stroke walk with and without a walking aid. This knowledge could help therapists in deciding whether or not patients should use a cane or quad stick w

  9. Latitudinal environmental gradients and diel variability influence abundance and community structure of Chaetognatha in Red Sea coral reefs

    KAUST Repository

    Al-aidaroos, Ali M.

    2016-08-15

    The Red Sea has been recognized as a unique region to study the effects of ecohydrographic gradients at a basin-wide scale. Its gradient of temperature and salinity relates to the Indian Ocean monsoon and associated wind-driven transport of fertile and plankton-rich water in winter from the Gulf of Aden into the Red Sea. Subsequent evaporation and thermohaline circulation increase the salinity and decrease water temperatures toward the North. Compared with other ocean systems, however, relatively little is known about the zooplankton biodiversity of the Red Sea and how this relates to Red Sea latitudinal gradients. Among the most abundant zooplankton taxa are Chaetognatha, which play an important role as secondary consumers in most marine food webs. Since Chaetognatha are sensitive to changes in temperature and salinity, we surmised latitudinal changes in their biodiversity, community structure and diel variability along the coast of Saudi Arabia. Samples were collected at nine coral reefs spanning approximately 1500km, from the Gulf of Aqaba in the northern Red Sea to the Farasan Archipelago in the southern Red Sea. Thirteen Chaetognatha species belonging to two families (Sagittidae and Krohnittidae) were identified. Latitudinal environmental changes and availability of prey (i.e. Copepoda, Crustacea) altered Chaetognatha density and distribution. The cosmopolitan epiplanktonic Flaccisagitta enflata (38.1%) dominated the Chaetognatha community, and its abundance gradually decreased from South to North. Notable were two mesopelagic species (Decipisagitta decipiens and Caecosagitta macrocephala) in the near-reef surface mixed layers at some sites. This was related to wind-induced upwelling of deep water into the coral reefs providing evidence of trophic oceanic subsidies. Most Sagittidae occurred in higher abundances at night, whereas Krohnittidae were more present during the day. Chaetognatha with developing (stage II) or mature ovaries (stage III) were more active

  10. Controls on Diel and Seasonal Aragonite Saturation State and Carbon Dioxide Variability in a Hawaiian Coral Reef Ecosystem

    Science.gov (United States)

    Shamberger, K. E.; Drupp, P.; Feely, R. A.; Sabine, C. L.; Solomon, R. F.; De Carlo, E. H.; Mackenzie, F. T.; Atkinson, M. J.

    2011-12-01

    The Coral Reef Instrumented Monitoring and CO2-Platform (CRIMP-CO2) was deployed in the southern Kaneohe Bay lagoon from December 2005 through May 2008, then on the Kaneohe Bay barrier reef from June 2008 to the present. The surface water temperature, partial pressure of carbon dioxide (pCO2sw), and aragonite saturation state (Ωarag) of barrier reef waters were similar to those in the southern bay lagoon on seasonal and annual time scales. The pCO2sw in Kaneohe Bay was higher in the summer than winter because temperature was also higher in summer. However, temperature and pCO2sw have opposing effects on Ωarag which resulted in a lack of seasonality in Ωarag. Deeper southern bay lagoon waters had attenuated diel cycles compared to the shallow and biogeochemically active barrier reef. Photosynthesis and respiration controlled the diel cycles of Ωarag and pCO2sw and resulted in large changes in both parameters on hourly time scales. The Ωarag levels in Kaneohe Bay were depressed, and pCO2sw levels elevated, compared to levels in the open ocean and in other coral reef systems because of high net ecosystem calcification (NEC) rates. NEC produced enough CO2 to maintain high pCO2sw levels while daily net photosynthesis consumed some CO2. As demonstrated for Kaneohe Bay, the biogeochemical cycles occurring in coral reef ecosystems strongly alter the Ωarag and pCO2sw of their open-ocean source waters. Taking into account the CO2 cycling within coral reef ecosystems may help determine which reefs will be negatively affected by ocean acidification in the near future.

  11. Effect of frustration on brain activation pattern in subjects with different temperament.

    Directory of Open Access Journals (Sweden)

    Maria eBierzynska

    2016-01-01

    Full Text Available In spite of the prevalence of frustration in everyday life, very few neuroimaging studies were focused on this emotional state. In the current study we aimed to examine effects of frustration on brain activity while performing a well-learned task in participants with low and high tolerance for arousal. Prior to the functional magnetic resonance imaging (fMRI session, the subjects underwent two weeks of Braille reading training. Frustration induction was obtained by using a novel highly difficult tactile task based on discrimination of Braille-like raised dots patterns and negative feedback. Effectiveness of this procedure has been confirmed in a pilot study using galvanic skin response (GSR and questionnaires. Brain activation pattern during tactile discrimination task before and after frustration were compared directly. Results revealed changes in brain activity in structures mostly reported in acute stress studies: striatum, cingulate cortex, insula, middle frontal gyrus and precuneus and in structures engaged in tactile Braille discrimination: SI and SII. Temperament type affected activation pattern. Subjects with low tolerance for arousal showed higher activation in the posterior cingulate gyrus, precuneus and inferior parietal lobule (IPL than high reactivity group. Even though performance in the discrimination trials following frustration was unaltered, we observed increased activity of primary and secondary somatosensory cortex processing the tactile information. We interpret this effect as an indicator of additional involvement required to counteract the effects of frustration.

  12. Developmental regulation of spatio-temporal patterns of cortical circuit activation

    Directory of Open Access Journals (Sweden)

    Trevor Charles Griffen

    2013-01-01

    Full Text Available Neural circuits are refined in an experience-dependent manner during early postnatal development. How development modulates the spatio-temporal propagation of activity through cortical circuits is poorly understood. Here we use voltage sensitive dye imaging (VSD to show that there are significant changes in the spatio-temporal patterns of intracortical signals in primary visual cortex from postnatal day 13 (P13, eye opening, to P28, the peak of the critical period for rodent visual cortical plasticity. Upon direct stimulation of layer 4 (L4, activity spreads to L2/3 and to L5 at all ages. However, while from eye opening to the peak of the critical period, the amplitude and persistence of the voltage signal decrease, peak activation is reached more quickly and the interlaminar gain increases with age. The lateral spread of activation within layers remains unchanged throughout the time window under analysis. These developmental changes in spatio-temporal patterns of intracortical circuit activation are mediated by differences in the contributions of excitatory and inhibitory synaptic components. Our results demonstrate that after eye opening the circuit in primary visual cortex is refined through a progression of changes that shape the spatio-temporal patterns of circuit activation. Signals become more efficiently propagated across layers through developmentally regulated changes in interlaminar gain.

  13. Accelerometer Quantification of Physical Activity and Activity Patterns in Patients with Ankylosing Spondylitis and Population Controls

    NARCIS (Netherlands)

    van Genderen, Simon; Boonen, Annelies; van der Heijde, Desiree; Heuft, Liesbeth; Luime, Jolanda; Spoorenberg, Anneke; Arends, Suzanne; Landewe, Robert; Plasqui, Guy

    2015-01-01

    Objective. To compare the total amount of physical activity (TPA) and time spent in various activity intensities of patients with ankylosing spondylitis (AS) and population controls, and to explore factors related to physical activity (PA). Methods. Subjects were asked to wear a triaxial

  14. Dusk to dawn activity patterns of anopheline mosquitoes in West Timor and Java, Indonesia.

    Science.gov (United States)

    Ndoen, Ermi; Wild, Clyde; Dale, Pat; Sipe, Neil; Dale, Mike

    2011-05-01

    Malaria is a serious health issue in Indonesia. We investigated the dusk to dawn anopheline mosquito activity patterns, host-seeking and resting locations in coastal plain, hilly and highland areas in West Timor and Java. Adult mosquitoes were captured landing on humans or resting in houses or animal barns. Data analyzed were: mosquito night-time activities; period of peak activity; night-time activity in specific periods of time and for mosquito resting locations. Eleven species were recorded; data were sparse for some species therefore detailed analyses were performed for four species only. In Java Anopheles vagus was common, with a bimodal pattern of high activity. In West Timor, its activity peaked around midnight. Other species with peak activity around the middle of the night were An. barbirostris and An. subpictus. Most species showed no biting and resting preference for indoors or outdoors, although An. barbirostris preferred indoors in West Timor, but outdoors in Java. An. aconitus and An. annularis preferred resting in human dwellings; An. subpictus and An. vagus preferred resting in animal barns. An. barbirostris preferred resting in human dwellings in West Timor and in animal barns in Java. The information is useful for planning the mosquito control aspect of malaria management. For example, where mosquito species have peak activity at night indoors, bednets and indoor residual spraying should reduce malaria risk, but where mosquitoes are most active outdoors, other options may be more effective.

  15. Physical activity patterns in patients with early and late age-related macular degeneration

    DEFF Research Database (Denmark)

    Subhi, Yousif; Sørensen, Torben Lykke

    2016-01-01

    best-corrected visual acuity in the best-seeing and the worse-seeing eye was associated with less engagement in physical activities that would work up sweat and a lower number of steps taken daily. Patients with bilateral vision loss from late AMD engaged in physical activities that were more......INTRODUCTION: Age-related macular degeneration (AMD) leads to visual impairment that affects visual functioning and thereby the ability to be physically active. We investigated physical activity patterns in patients with AMD. METHODS: Patients with early and late AMD and elderly controls were...... recruited for this hospital-based cross-sectional study. All participants had their best-corrected visual acuity measured and were interviewed about their physical activity based on questions that covered regular physical activity, physical activity that would work up sweat, climbing the stairs and time...

  16. Physical activity patterns in patients with early and late age-related macular degeneration

    DEFF Research Database (Denmark)

    Subhi, Yousif; Sørensen, Torben Lykke

    2016-01-01

    best-corrected visual acuity in the best-seeing and the worse-seeing eye was associated with less engagement in physical activities that would work up sweat and a lower number of steps taken daily. Patients with bilateral vision loss from late AMD engaged in physical activities that were more......INTRODUCTION: Age-related macular degeneration (AMD) leads to visual impairment that affects visual functioning and thereby the ability to be physically active. We investigated physical activity patterns in patients with AMD. METHODS: Patients with early and late AMD and elderly controls were...... recruited for this hospital-based cross-sectional study. All participants had their best-corrected visual acuity measured and were interviewed about their physical activity based on questions that covered regular physical activity, physical activity that would work up sweat, climbing the stairs and time...

  17. Patterns of Alcohol Policy Enforcement Activities among Local Law Enforcement Agencies: A Latent Class Analysis.

    Science.gov (United States)

    Erickson, Darin J; Rutledge, Patricia C; Lenk, Kathleen M; Nelson, Toben F; Jones-Webb, Rhonda; Toomey, Traci L

    We assessed levels and patterns of alcohol policy enforcement activities among U.S. local law enforcement agencies. We conducted a cross-sectional survey of a representative sample of 1,631 local law enforcement agencies across the 50 states. We assessed 29 alcohol policy enforcement activities within each of five enforcement domains-underage alcohol possession/consumption, underage alcohol provision, underage alcohol sales, impaired driving, and overservice of alcohol-and conducted a series of latent class analyses to identify unique classes or patterns of enforcement activity for each domain. We identified three to four unique enforcement activity classes for each of the enforcement domains. In four of the domains, we identified a Uniformly Low class (i.e., little or no enforcement) and a Uniformly High enforcement activity class (i.e., relatively high levels of enforcement), with one or two middle classes where some but not all activities were conducted. The underage provision domain had a Uniformly Low class but not a Uniformly High class. The Uniformly Low class was the most prevalent class in three domains: underage provision (58%), underage sales (61%), and overservice (79%). In contrast, less than a quarter of agencies were in Uniformly High classes. We identified qualitatively distinct patterns of enforcement activity, with a large proportion of agencies in classes characterized by little or no enforcement and fewer agencies in high enforcement classes. An important next step is to determine if these patterns are associated with rates of alcohol use and alcohol-related injury and mortality.

  18. Stochastically gating ion channels enable patterned spike firing through activity-dependent modulation of spike probability.

    Directory of Open Access Journals (Sweden)

    Joshua T Dudman

    2009-02-01

    Full Text Available The transformation of synaptic input into patterns of spike output is a fundamental operation that is determined by the particular complement of ion channels that a neuron expresses. Although it is well established that individual ion channel proteins make stochastic transitions between conducting and non-conducting states, most models of synaptic integration are deterministic, and relatively little is known about the functional consequences of interactions between stochastically gating ion channels. Here, we show that a model of stellate neurons from layer II of the medial entorhinal cortex implemented with either stochastic or deterministically gating ion channels can reproduce the resting membrane properties of stellate neurons, but only the stochastic version of the model can fully account for perithreshold membrane potential fluctuations and clustered patterns of spike output that are recorded from stellate neurons during depolarized states. We demonstrate that the stochastic model implements an example of a general mechanism for patterning of neuronal output through activity-dependent changes in the probability of spike firing. Unlike deterministic mechanisms that generate spike patterns through slow changes in the state of model parameters, this general stochastic mechanism does not require retention of information beyond the duration of a single spike and its associated afterhyperpolarization. Instead, clustered patterns of spikes emerge in the stochastic model of stellate neurons as a result of a transient increase in firing probability driven by activation of HCN channels during recovery from the spike afterhyperpolarization. Using this model, we infer conditions in which stochastic ion channel gating may influence firing patterns in vivo and predict consequences of modifications of HCN channel function for in vivo firing patterns.

  19. Association between facial growth pattern and facial muscle activity: A prospective cross-sectional study.

    Science.gov (United States)

    Alabdullah, Mohannad; Saltaji, Humam; Abou-Hamed, Hussein; Youssef, Mohamed

    2015-06-01

    To evaluate the relationship between facial growth pattern and electromyography (EMG) of facial muscles: anterior temporalis, masseter, buccinators, orbicularis oris, mentalis and anterior digastric. The sample consisted of 77 subjects aged between 18-28 years (mean age 21.10±2.03), with dental Class I relationship, normal overjet and overbite, balanced facial profile, no signs of temporomandibular disorders, and no previous orthodontic treatment. Facial growth pattern was determined on the lateral cephalograms according to the Björk sum (sum of the N-S-Ar, S-Ar-Go, and Ar-Go-Me angles) dividing the sample into three groups: horizontal facial pattern group (24 subjects), normal facial pattern group (41 subjects), and vertical facial pattern group (12 subjects). The EMG of anterior temporalis, masseter, buccinator, orbicularis oris, mentalis and anterior digastric muscles were examined for each patient in the rest position and in functional positions (central maximum intercuspation, chewing on right side, chewing on left side and swallowing). Mean values and standard deviation of EMG were obtained and compared between the three groups. At rest, the EMG of the masseter, orbicularis oris and anterior digastric were higher in the vertical facial pattern group compared with the other two groups, with a moderate positive correlation between the EMG of these muscles and the Björk sum (Pmuscles (Pmuscle activity and facial growth pattern. The findings suggest that the activity of masticatory and perioral muscles could play a role in the direction of the facial growth. Copyright © 2015 CEO. Published by Elsevier Masson SAS. All rights reserved.

  20. A Computational Experiment of the Endo versus Exo Preference in a Diels-Alder Reaction

    Science.gov (United States)

    Rowley, Christopher N.; Woo, Tom K.

    2009-01-01

    We have developed and tested a computational laboratory that investigates an endo versus exo Diels-Alder cycloaddition. This laboratory employed density functional theory (DFT) calculations to study the cycloaddition of N-phenylmaleimide to furan. The endo and exo stereoisomers of the product were distinguished by building the two isomers in a…

  1. Spatial and Diel Variability in Photosynthetic and Photoprotective Pigments in Shallow Benthic Communities

    Science.gov (United States)

    2016-06-14

    photosynthetic and photoprotective pigments in benthic plants (primarily benthic microalgae ) affect the optical properties (primarily spectral...fluorescence that results from photoadaptation and vertical migration of microalgae in the sediments. Diel variation in fluorescence of phytoplankton in...sediment surface reflectance and fluorescence have also been processed. RESULTS At Lee Stocking (May 1999), biomass of the benthic microalgae , as

  2. Lewis acid catalysis of a Diels-Alder reaction in water

    NARCIS (Netherlands)

    Otto, S; Bertoncin, F; Engberts, JBFN

    1996-01-01

    Here we report the first detailed study of a Diels-Alder (DA) reaction that is catalyzed by Lewis acids in water. The effect of Co2+, Ni2+, Cu2+ and Zn2+ ions as Lewis acid catalysts on the rate and endo-exo selectivity of the DA reaction between the bidentate dienophiles 3-phenyl-1-(2-pyridyl)-2-pr

  3. Stereoisomeric effects in thermo-remendable polymer networks based on diels-alder crosslink reactions

    NARCIS (Netherlands)

    Canadell, J.; Fischer, H.R.; With, G. de; Benthem, R.A.T.M. van

    2010-01-01

    This study describes the synthesis, the spectroscopic, and the thermal characterization of linear and crosslinked polymers as well as a number of corresponding model compounds, containing Diels-Alder adducts derived from furan and maleimide groups. The thermal reversibility (rDA, DA) of structurally

  4. Novel Diels-Alder based self-healing epoxies for aerospace composites

    NARCIS (Netherlands)

    Coope, T.S.; Turkenburg, D.H.; Fischer, H.R.; Luterbacher, R.; Bracht, H. van; Bond, I.P.

    2016-01-01

    Epoxy resins containing Diels-Alder (DA) furan and maleimide moieties are presented with the capability to self-heal after exposure to an external heat source. A conventional epoxy amine system has been combined with furfuryl and maleimide functional groups in a two-step process, to avoid major side

  5. Solvent Effects in Asymmetric Hetero Diels-Alder and Ene Reactions

    DEFF Research Database (Denmark)

    Johannsen, Mogens; Jørgensen, Karl Anker

    1996-01-01

    The use of polar solvents such as nitromethane or 2-nitropropane leads to a significant improvement of the catalytic properties of a cationic copper-Lewis acid in the hetero Diels-Alder reaction of alkyl glyoxylates with dienes; The scope of a newly developed copper(II)-bisoxazoline catalyst...

  6. Lewis acid catalysis of a Diels-Alder reaction in water

    NARCIS (Netherlands)

    Otto, S; Bertoncin, F; Engberts, JBFN

    1996-01-01

    Here we report the first detailed study of a Diels-Alder (DA) reaction that is catalyzed by Lewis acids in water. The effect of Co2+, Ni2+, Cu2+ and Zn2+ ions as Lewis acid catalysts on the rate and endo-exo selectivity of the DA reaction between the bidentate dienophiles

  7. Catchment scale controls the temporal connection of transpiration and diel fluctuations in streamflow

    Science.gov (United States)

    C.B. Graham; H.R. Barnard; K.L. Kavanagh; J.P. McNamara

    2012-01-01

    Diel fluctuations can comprise a significant portion of summer discharge in small to medium catchments. The source of these signals and the manner in which they are propagated to stream gauging sites is poorly understood. In this work, we analysed stream discharge from 15 subcatchments in Dry Creek, Idaho, Reynolds Creek, Idaho, and HJ Andrews, Oregon. We identified...

  8. The photobehaviour of Daphnia spp. as a model to explain diel vertical migration in zooplankton

    NARCIS (Netherlands)

    Ringelberg, J.

    1999-01-01

    Many pelagic animal species in the marine environment and in lakes migrate to deeper water layers before sunrise and return around sunset. The amplitude of these diel vertical migrations (DVM) varies from several hundreds of metres in the oceans to approx. 5-20 m in lakes. DVM can be studied from a

  9. Stereoisomeric effects in thermo-remendable polymer networks based on diels-alder crosslink reactions

    NARCIS (Netherlands)

    Canadell, J.; Fischer, H.R.; With, G. de; Benthem, R.A.T.M. van

    2010-01-01

    This study describes the synthesis, the spectroscopic, and the thermal characterization of linear and crosslinked polymers as well as a number of corresponding model compounds, containing Diels-Alder adducts derived from furan and maleimide groups. The thermal reversibility (rDA, DA) of structurally

  10. Novel Diels-Alder based self-healing epoxies for aerospace composites

    NARCIS (Netherlands)

    Coope, T.S.; Turkenburg, D.H.; Fischer, H.R.; Luterbacher, R.; Bracht, H. van; Bond, I.P.

    2016-01-01

    Epoxy resins containing Diels-Alder (DA) furan and maleimide moieties are presented with the capability to self-heal after exposure to an external heat source. A conventional epoxy amine system has been combined with furfuryl and maleimide functional groups in a two-step process, to avoid major

  11. Biotransformation of a cage-like diels-alder adduct and derivatives by Mucor ramosissimus samutsevitsch

    Science.gov (United States)

    Ito, Felicia Megumi; Mena, Ana Elisa Maciel; Marques, Maria Rita; de Lima, Dênis Pires; Beatriz, Adilson

    2009-01-01

    The present study aimed to evaluate the ability for biotransformation of the Diels-Alder adduct tricyclo[6.2.1.02,7]undeca-4,9-dien-3,6-dione (1) and two synthetic derivatives by the saprobe fungus Mucor ramosissimus Samutsevitsch. Products from oxidation, isomerization and, regioselective and enantioselective reduction were achieved. PMID:24031400

  12. Functionalization of organic semiconductor crystals via the Diels-Alder reaction.

    Science.gov (United States)

    Qualizza, Brittni A; Prasad, Srividya; Chiarelli, M Paul; Ciszek, Jacob W

    2013-05-18

    A surface adlayer is generated on organic single crystals (tetracene and rubrene) using the site specific Diels-Alder reaction and a series of vapor phase dienophiles. X-ray photoelectron spectroscopy (XPS) confirms adsorption on the surfaces of tetracene and rubrene and mass spectrometry demonstrates the reaction's applicability to a range of dienophiles.

  13. Synthesis of Novel Bisoxazoline Ligands for the Enantioselective Diels-Alder Reaction

    Institute of Scientific and Technical Information of China (English)

    Qing Hua BIAN; Jun LIU; Ming Ming YIN; Min WANG

    2006-01-01

    Four novel bisoxazoline ligands 8a-d were synthesized from (S)-amino alcohols and could be formed effective catalysts (up to 77% ee for endo isomer) with Cu(OTf)2 for enantioselective Diels-Alder addition. The facility of the reaction was dependent on the nature of the substituent R in the bisoxazoline ligand.

  14. Recent applications of intramolecular Diels-Alder reactions to natural product synthesis

    DEFF Research Database (Denmark)

    Juhl, M.; Tanner, David Ackland

    2009-01-01

    This tutorial review presents some recent examples of intramolecular Diels-Alder (IMDA) reactions as key complexity-generating steps in the total synthesis of structurally intricate natural products. The opportunities afforded by transannular (TADA) versions of the IMDA reaction in complex molecu...

  15. Useful dual Diels-Alder behavior of 2-azetidinone-tethered aryl imines as azadienophiles or azadienes: a beta-lactam-based stereocontrolled access to optically pure highly functionalized indolizidine systems.

    Science.gov (United States)

    Alcaide, Benito; Almendros, Pedro; Alonso, Jose M; Aly, Moustafa F

    2003-07-21

    Imines derived from 4-oxoazetidine-2-carbaldehydes have been found to be versatile Diels-Alder reagents in that they exhibit two reactivity patterns. 2-Azetidinone-tethered imines undergo diastereoselective reaction with Danishefsky's diene in the presence of different Lewis acids. The effect of the amount of catalyst on the conversion rate as well as on the product ratio has been studied. Under standard reaction conditions, indium(III) chloride and zinc(II) iodide provided the best yields, and indium(III) triflate the highest diastereoselectivity in the Lewis acid promoted aza-Diels-Alder cycloaddition. Treatment of the aforementioned imines with cyclopentadiene, 2,3-dimethyl-1,3-butadiene or 3,4-dihydro-2 H-pyran led to cycloadducts arising from inverse electron-demand condensation involving the beta-lactam-tethered aryl imine as the heterodiene component. In addition, the first methodology for preparing indolizidines from beta-lactams has been developed. This process involves amide bond cleavage of the beta-lactam ring in the aza-Diels-Alder cycloadducts with concomitant cyclization. Full chirality transfer occurs when the reaction is performed with an enantiomerically pure substrate.

  16. Diel variations in carbon isotopic composition and concentration of organic acids and their impact on plant dark respiration in different species.

    Science.gov (United States)

    Lehmann, M M; Wegener, F; Werner, R A; Werner, C

    2016-09-01

    Leaf respiration in the dark and its C isotopic composition (δ(13) CR ) contain information about internal metabolic processes and respiratory substrates. δ(13) CR is known to be less negative compared to potential respiratory substrates, in particular shortly after darkening during light enhanced dark respiration (LEDR). This phenomenon might be driven by respiration of accumulated (13) C-enriched organic acids, however, studies simultaneously measuring δ(13) CR during LEDR and potential respiratory substrates are rare. We determined δ(13) CR and respiration rates (R) during LEDR, as well as δ(13) C and concentrations of potential respiratory substrates using compound-specific isotope analyses. The measurements were conducted throughout the diel cycle in several plant species under different environmental conditions. δ(13) CR and R patterns during LEDR were strongly species-specific and showed an initial peak, which was followed by a progressive decrease in both values. The species-specific differences in δ(13) CR and R during LEDR may be partially explained by the isotopic composition of organic acids (e.g., oxalate, isocitrate, quinate, shikimate, malate), which were (13) C-enriched compared to other respiratory substrates (e.g., sugars and amino acids). However, the diel variations in both δ(13) C and concentrations of the organic acids were generally low. Thus, additional factors such as the heterogeneous isotope distribution in organic acids and the relative contribution of the organic acids to respiration are required to explain the strong (13) C enrichment in leaf dark-respired CO2 .

  17. An active poroelastic model for mechanochemical patterns in protoplasmic droplets of Physarum polycephalum.

    Directory of Open Access Journals (Sweden)

    Markus Radszuweit

    Full Text Available Motivated by recent experimental studies, we derive and analyze a two-dimensional model for the contraction patterns observed in protoplasmic droplets of Physarum polycephalum. The model couples a description of an active poroelastic two-phase medium with equations describing the spatiotemporal dynamics of the intracellular free calcium concentration. The poroelastic medium is assumed to consist of an active viscoelastic solid representing the cytoskeleton and a viscous fluid describing the cytosol. The equations for the poroelastic medium are obtained from continuum force balance and include the relevant mechanical fields and an incompressibility condition for the two-phase medium. The reaction-diffusion equations for the calcium dynamics in the protoplasm of Physarum are extended by advective transport due to the flow of the cytosol generated by mechanical stress. Moreover, we assume that the active tension in the solid cytoskeleton is regulated by the calcium concentration in the fluid phase at the same location, which introduces a mechanochemical coupling. A linear stability analysis of the homogeneous state without deformation and cytosolic flows exhibits an oscillatory Turing instability for a large enough mechanochemical coupling strength. Numerical simulations of the model equations reproduce a large variety of wave patterns, including traveling and standing waves, turbulent patterns, rotating spirals and antiphase oscillations in line with experimental observations of contraction patterns in the protoplasmic droplets.

  18. An active poroelastic model for mechanochemical patterns in protoplasmic droplets of Physarum polycephalum.

    Science.gov (United States)

    Radszuweit, Markus; Engel, Harald; Bär, Markus

    2014-01-01

    Motivated by recent experimental studies, we derive and analyze a two-dimensional model for the contraction patterns observed in protoplasmic droplets of Physarum polycephalum. The model couples a description of an active poroelastic two-phase medium with equations describing the spatiotemporal dynamics of the intracellular free calcium concentration. The poroelastic medium is assumed to consist of an active viscoelastic solid representing the cytoskeleton and a viscous fluid describing the cytosol. The equations for the poroelastic medium are obtained from continuum force balance and include the relevant mechanical fields and an incompressibility condition for the two-phase medium. The reaction-diffusion equations for the calcium dynamics in the protoplasm of Physarum are extended by advective transport due to the flow of the cytosol generated by mechanical stress. Moreover, we assume that the active tension in the solid cytoskeleton is regulated by the calcium concentration in the fluid phase at the same location, which introduces a mechanochemical coupling. A linear stability analysis of the homogeneous state without deformation and cytosolic flows exhibits an oscillatory Turing instability for a large enough mechanochemical coupling strength. Numerical simulations of the model equations reproduce a large variety of wave patterns, including traveling and standing waves, turbulent patterns, rotating spirals and antiphase oscillations in line with experimental observations of contraction patterns in the protoplasmic droplets.

  19. Advance cueing produces enhanced action-boundary patterns of spike activity in the sensorimotor striatum

    OpenAIRE

    2011-01-01

    One of the most characteristic features of habitual behaviors is that they can be evoked by a single cue. In the experiments reported here, we tested for the effects of such advance cueing on the firing patterns of striatal neurons in the sensorimotor striatum. Rats ran in a T-maze with instruction cues about the location of reward given at the start of the runs. This advance cueing about reward produced a highly augmented task-bracketing pattern of activity at the beginning and end of proced...

  20. Activity patterns elicited by airflow in the olfactory bulb and their possible functions.

    Science.gov (United States)

    Wu, Ruiqi; Liu, Yue; Wang, Li; Li, Bo; Xu, Fuqiang

    2017-10-02

    Olfactory sensory neurons (OSNs) can sense both odorants and airflows. In the olfactory bulb (OB), the coding of odor information is well studied, but the coding of mechanical stimulation is rarely investigated. Unlike odor sensing, the functions of airflow sensing of OSNs are also largely unknown. Here, the activity patterns elicited by mechanical airflow in male rat OBs were mapped using fMRI and correlated with local field potential recordings. In an attempt to reveal possible functions of airflow sensing, the relationship between airflow patterns and physiological parameters was also examined. We found that: a) the activity pattern in the OB evoked by airflow in the nasal cavity was more broadly distributed, compared with those evoked by odors; b) the pattern intensity increases with total airflow, while the pattern topography is rather similar; and c) the heart rate, spontaneous respiratory rate, and EEG power in β-band were reduced under regular mechanical airflow, compared with no airflow through the nasal cavity. The mapping results provide evidence that the signals elicited by mechanical airflow in OSNs are transmitted to the OB, and that the OB has the potential to code and process mechanical information. Our functional data indicate that airflow rhythm in the olfactory system is able to regulate the physiological and brain states, providing an explanation for the effects of breath controlling in meditation, yoga, and Taoism practices.Significant statementThe studies about presentation of odor information in the olfactory bulb is comprehensive, while that of breathing features is rare. Here we investigated the global activity patterns in the rat olfactory bulb elicited by airflow in the nasal cavity using BOLD-fMRI for the first time and found that the activity pattern elicited by airflow is broadly distributed, with increasing pattern intensity and similar topography under increasing total airflow. Further, heart rate, spontaneous respiratory rate in

  1. Daily Activity and Nest Occupation Patterns of Fox Squirrels (Sciurus niger throughout the Year.

    Directory of Open Access Journals (Sweden)

    Thomas Wassmer

    Full Text Available The authors investigated the general activity and nest occupation patterns of fox squirrels in a natural setting using temperature-sensitive data loggers that measure activity as changes in the microenvironment of the animal. Data were obtained from 25 distinct preparations, upon 14 unique squirrels, totaling 1385 recording days. The animals were clearly diurnal, with a predominantly unimodal activity pattern, although individual squirrels occasionally exhibited bimodal patterns, particularly in the spring and summer. Even during the short days of winter (9 hours of light, the squirrels typically left the nest after dawn and returned before dusk, spending only about 7 hours out of the nest each day. Although the duration of the daily active phase did not change with the seasons, the squirrels exited the nest earlier in the day when the days became longer in the summer and exited the nest later in the day when the days became shorter in the winter, thus tracking dawn along the seasons. During the few hours spent outside the nest each day, fox squirrels seemed to spend most of the time sitting or lying. These findings suggest that fox squirrels may have adopted a slow life history strategy that involves long periods of rest on trees and short periods of ground activity each day.

  2. Effect of cadence regulation on muscle activation patterns during robot assisted gait: a dynamic simulation study.

    Science.gov (United States)

    Hussain, Shahid; Xie, Sheng Q; Jamwal, Prashant K

    2013-03-01

    Cadence or stride frequency is an important parameter being controlled in gait training of neurologically impaired subjects. The aim of this study was to examine the effects of cadence variation on muscle activation patterns during robot assisted unimpaired gait using dynamic simulations. A twodimensional (2-D) musculoskeletal model of human gait was developed considering eight major muscle groups along with existing ground contact force (GCF) model. A 2-D model of a robotic orthosis was also developed which provides actuation to the hip, knee and ankle joints in the sagittal plane to guide subjects limbs on reference trajectories. A custom inverse dynamics algorithm was used along with a quadratic minimization algorithm to obtain a feasible set of muscle activation patterns. Predicted patterns of muscle activations during slow, natural and fast cadence were compared and the mean muscle activations were found to be increasing with an increase in cadence. The proposed dynamic simulation provide important insight into the muscle activation variations with change in cadence during robot assisted gait and provide the basis for investigating the influence of cadence regulation on neuromuscular parameters of interest during robot assisted gait.

  3. Characterising infant inter-breath interval patterns during active and quiet sleep using recurrence plot analysis.

    Science.gov (United States)

    Terrill, Philip I; Wilson, Stephen J; Suresh, Sadasivam; Cooper, David M

    2009-01-01

    Breathing patterns are characteristically different between active and quiet sleep states in infants. It has been previously identified that breathing dynamics are governed by a non-linear controller which implies the need for a nonlinear analytical tool. Further, it has been shown that quantified nonlinear variables are different between adult sleep states. This study aims to determine whether a nonlinear analytical tool known as recurrence plot analysis can characterize breath intervals of active and quiet sleep states in infants. Overnight polysomnograms were obtained from 32 healthy infants. The 6 longest periods each of active and quiet sleep were identified and a software routine extracted inter-breath interval data for recurrence plot analysis. Determinism (DET), laminarity (LAM) and radius (RAD) values were calculated for an embedding dimension of 4, 6, 8 and 16, and fixed recurrence of 0.5, 1, 2, 3.5 and 5%. Recurrence plots exhibited characteristically different patterns for active and quiet sleep. Active sleep periods typically had higher values of RAD, DET and LAM than for quiet sleep, and this trend was invariant to a specific choice of embedding dimension or fixed recurrence. These differences may provide a basis for automated sleep state classification, and the quantitative investigation of pathological breathing patterns.

  4. Summer movements and activity patterns of river otters in Northeastern Ohio, USA

    Directory of Open Access Journals (Sweden)

    David A. Helon

    2013-09-01

    Full Text Available It is important to understand river otter (Lontra canadensis movement and activity patterns for successful management and reintroduction plans. As part of a river otter study conducted in the Killbuck Watershed, the largest wetland complex in Ohio, USA outside of the Lake Erie marshes, 11 river otters were radio-tagged and monitored for movements and activity patterns. Twenty-seven 24-hour monitoring surveys were conducted during summer months (June-July of 2002 and 2003. The mean movement distance of female river otters ( MEAN = 1.8 km, SE = 0.23 was less (P = 0.0012 than the mean movement distance of male river otters ( MEAN = 5.2 km, SE = 0.73. River otters were more active than inactive from 2201-0400 hrs (71% active, followed by 0401-1000 hrs (68% active, and 1601-2200 hrs (45% active; they were more inactive than active from 1001-1600 hrs (14% active. These results show that river otters can move long distances and it is important to manage not only wetland systems but riparian corridors that aid in dispersal of river otters to other wetland complexes and watersheds.

  5. Physical activity patterns and correlates among adults from a developing country: the Sri Lanka Diabetes and Cardiovascular Study

    National Research Council Canada - National Science Library

    Katulanda, Prasad; Jayawardena, Ranil; Jayawardana, Ranil; Ranasinghe, Priyanga; Rezvi Sheriff, M H; Matthews, David R

    2013-01-01

    To evaluate patterns of physical activity (PA), the prevalence of physical inactivity and the relationships between PA and sociodemographic, clinical and biochemical parameters among Sri Lankan adults...

  6. Fusion analysis of functional MRI data for classification of individuals based on patterns of activation.

    Science.gov (United States)

    Ramezani, Mahdi; Abolmaesumi, Purang; Marble, Kris; Trang, Heather; Johnsrude, Ingrid

    2015-06-01

    Classification of individuals based on patterns of brain activity observed in functional MRI contrasts may be helpful for diagnosis of neurological disorders. Prior work for classification based on these patterns have primarily focused on using a single contrast, which does not take advantage of complementary information that may be available in multiple contrasts. Where multiple contrasts are used, the objective has been only to identify the joint, distinct brain activity patterns that differ between groups of subjects; not to use the information to classify individuals. Here, we use joint Independent Component Analysis (jICA) within a Support Vector Machine (SVM) classification method, and take advantage of the relative contribution of activation patterns generated from multiple fMRI contrasts to improve classification accuracy. Young (age: 19-26) and older (age: 57-73) adults (16 each) were scanned while listening to noise alone and to speech degraded with noise, half of which contained meaningful context that could be used to enhance intelligibility. Functional contrasts based on these conditions (and a silent baseline condition) were used within jICA to generate spatially independent joint activation sources and their corresponding modulation profiles. Modulation profiles were used within a non-linear SVM framework to classify individuals as young or older. Results demonstrate that a combination of activation maps across the multiple contrasts yielded an area under ROC curve of 0.86, superior to classification resulting from individual contrasts. Moreover, class separability, measured by a divergence criterion, was substantially higher when using the combination of activation maps.

  7. Diurnal activity patterns of farm mink (Mustela vison) subjected to different feeding routines

    DEFF Research Database (Denmark)

    Hansen, Steffen W; Møller, Steen H

    2008-01-01

    Diurnal patterns and time courses of activity and feed availability were investigated in three generations of farmed mink (2003-2005) subjected to three different feedings routines; normal farm feeding (close to average ad libitum), ad libitum, and restricted feeding. The mink were fed daily at h12...... on different feeding schedules. The diurnal activity rhythm in both the farm fed and the ad libitum fed mink consisted of three activity peaks; one around sunrise, one prior to feeding time, and one around sunset. However, the restrictively fed mink decreased their activity in the morning when feed...... was not available and increased their activity up to expected feeding time at noon and again around sunset. When feeding was postponed, the restrictively fed mink increased their activity up to expected feeding time, whereas the ad libitum or farm fed mink did not. The results indicate that mink fed restrictively...

  8. Daily and seasonal activity patterns of free range South-American rattlesnake (Crotalus durissus

    Directory of Open Access Journals (Sweden)

    ALEXANDRO M. TOZETTI

    2013-09-01

    Full Text Available This study aimed at describing daily and seasonal variation in the activity of a population of South-American rattlesnakes (Crotalus durissus in a savanna like habitat (Cerrado in Southeastern Brazil. Seasonal and daily activities of snakes were evaluated by the number of captures of snakes during road surveys, accidental encounters, and relocations by radio-tracking. Our results show that climatic variables such as air temperature and rainfall have little influence on the activity pattern of rattlesnakes. Our findings indicate that rattlesnakes spend most of the day resting and most of the night in ambush posture. The South-American rattlesnake is active throughout the year with a discrete peak in activity of males during the matting season. The possibility of maintaining activity levels even during the coldest and driest season can facilitate the colonization of several habitats in South America. This possibility currently facilitates the colonization of deforested areas by rattlesnakes.

  9. A case-control study of physical activity patterns and risk of non-fatal myocardial infarction

    Directory of Open Access Journals (Sweden)

    Gong Jian

    2013-02-01

    Full Text Available Abstract Background The interactive effects of different types of physical activity on cardiovascular disease (CVD risk have not been fully considered in previous studies. We aimed to identify physical activity patterns that take into account combinations of physical activities and examine the association between derived physical activity patterns and risk of acute myocardial infarction (AMI. Methods We examined the relationship between physical activity patterns, identified by principal component analysis (PCA, and AMI risk in a case-control study of myocardial infarction in Costa Rica (N=4172, 1994-2004. The component scores derived from PCA and total METS were used in natural cubic spline models to assess the association between physical activity and AMI risk. Results Four physical activity patterns were retained from PCA that were characterized as the rest/sleep, agricultural job, light indoor activity, and manual labor job patterns. The light indoor activity and rest/sleep patterns showed an inverse linear relation (P for linearity=0.001 and a U-shaped association (P for non-linearity=0.03 with AMI risk, respectively. There was an inverse association between total activity-related energy expenditure and AMI risk but it reached a plateau at high levels of physical activity (P for non-linearity=0.01. Conclusions These data suggest that a light indoor activity pattern is associated with reduced AMI risk. PCA provides a new approach to investigate the relationship between physical activity and CVD risk.

  10. Ambulatory activity monitoring: Progress in measurement of activity, posture, and specific motion patterns in daily life

    NARCIS (Netherlands)

    J.B.J. Bussmann (Hans); U.W. Ebner-Priemer (Ulrich); J. Fahrenberg (Jochen)

    2009-01-01

    textabstractBehavior is central to psychology in almost any definition. Although observable activity is a core aspect of behavior, assessment strategies have tended to focus on emotional, cognitive, or physiological responses. When physical activity is assessed, it is done so mostly with questionnai

  11. Ambulatory activity monitoring: Progress in measurement of activity, posture, and specific motion patterns in daily life

    NARCIS (Netherlands)

    J.B.J. Bussmann (Hans); U.W. Ebner-Priemer (Ulrich); J. Fahrenberg (Jochen)

    2009-01-01

    textabstractBehavior is central to psychology in almost any definition. Although observable activity is a core aspect of behavior, assessment strategies have tended to focus on emotional, cognitive, or physiological responses. When physical activity is assessed, it is done so mostly with questionnai

  12. Patterns of Adolescents' Participation in Organized Activities: Are Sports Best when Combined with Other Activities?

    Science.gov (United States)

    Linver, Miriam R.; Roth, Jodie L.; Brooks-Gunn, Jeanne

    2009-01-01

    Although many adolescents participate in sports and other types of organized activities, little extant research explores how youth development outcomes may vary for youth involved in different combinations of activities. The present study uses the Child Development Supplement of the Panel Study of Income Dynamics, a large, nationally…

  13. Following a foraging fish-finder: diel habitat use of Blainville's beaked whales revealed by echolocation.

    Directory of Open Access Journals (Sweden)

    Patricia Arranz

    Full Text Available Simultaneous high resolution sampling of predator behavior and habitat characteristics is often difficult to achieve despite its importance in understanding the foraging decisions and habitat use of predators. Here we tap into the biosonar system of Blainville's beaked whales, Mesoplodon densirostris, using sound and orientation recording tags to uncover prey-finding cues available to echolocating predators in the deep-sea. Echolocation sounds indicate where whales search and encounter prey, as well as the altitude of whales above the sea-floor and the density of organisms around them, providing a link between foraging activity and the bio-physical environment. Tagged whales (n = 9 hunted exclusively at depth, investing most of their search time either in the lower part of the deep scattering layer (DSL or near the sea-floor with little diel change. At least 43% (420/974 of recorded prey-capture attempts were performed within the benthic boundary layer despite a wide range of dive depths, and many dives included both meso- and bentho-pelagic foraging. Blainville's beaked whales only initiate searching when already deep in the descent and encounter prey suitable for capture within 2 min of the start of echolocation, suggesting that these whales are accessing prey in reliable vertical strata. Moreover, these prey resources are sufficiently dense to feed the animals in what is effectively four hours of hunting per day enabling a strategy in which long dives to exploit numerous deep-prey with low nutritional value require protracted recovery periods (average 1.5 h between dives. This apparent searching efficiency maybe aided by inhabiting steep undersea slopes with access to both the DSL and the sea-floor over small spatial scales. Aggregations of prey in these biotopes are located using biosonar-derived landmarks and represent stable and abundant resources for Blainville's beaked whales in the otherwise food-limited deep-ocean.

  14. Following a foraging fish-finder: diel habitat use of Blainville's beaked whales revealed by echolocation.

    Science.gov (United States)

    Arranz, Patricia; Aguilar de Soto, Natacha; Madsen, Peter T; Brito, Alberto; Bordes, Fernando; Johnson, Mark P

    2011-01-01

    Simultaneous high resolution sampling of predator behavior and habitat characteristics is often difficult to achieve despite its importance in understanding the foraging decisions and habitat use of predators. Here we tap into the biosonar system of Blainville's beaked whales, Mesoplodon densirostris, using sound and orientation recording tags to uncover prey-finding cues available to echolocating predators in the deep-sea. Echolocation sounds indicate where whales search and encounter prey, as well as the altitude of whales above the sea-floor and the density of organisms around them, providing a link between foraging activity and the bio-physical environment. Tagged whales (n = 9) hunted exclusively at depth, investing most of their search time either in the lower part of the deep scattering layer (DSL) or near the sea-floor with little diel change. At least 43% (420/974) of recorded prey-capture attempts were performed within the benthic boundary layer despite a wide range of dive depths, and many dives included both meso- and bentho-pelagic foraging. Blainville's beaked whales only initiate searching when already deep in the descent and encounter prey suitable for capture within 2 min of the start of echolocation, suggesting that these whales are accessing prey in reliable vertical strata. Moreover, these prey resources are sufficiently dense to feed the animals in what is effectively four hours of hunting per day enabling a strategy in which long dives to exploit numerous deep-prey with low nutritional value require protracted recovery periods (average 1.5 h) between dives. This apparent searching efficiency maybe aided by inhabiting steep undersea slopes with access to both the DSL and the sea-floor over small spatial scales. Aggregations of prey in these biotopes are located using biosonar-derived landmarks and represent stable and abundant resources for Blainville's beaked whales in the otherwise food-limited deep-ocean.

  15. Enabling active and healthy ageing decision support systems with the smart collection of TV usage patterns.

    Science.gov (United States)

    Billis, Antonis S; Batziakas, Asterios; Bratsas, Charalampos; Tsatali, Marianna S; Karagianni, Maria; Bamidis, Panagiotis D

    2016-03-01

    Smart monitoring of seniors behavioural patterns and more specifically activities of daily living have attracted immense research interest in recent years. Development of smart decision support systems to support the promotion of health smart homes has also emerged taking advantage of the plethora of smart, inexpensive and unobtrusive monitoring sensors, devices and software tools. To this end, a smart monitoring system has been used in order to extract meaningful information about television (TV) usage patterns and subsequently associate them with clinical findings of experts. The smart TV operating state remote monitoring system was installed in four elderly women homes and gathered data for more than 11 months. Results suggest that TV daily usage (time the TV is turned on) can predict mental health change. Conclusively, the authors suggest that collection of smart device usage patterns could strengthen the inference capabilities of existing health DSSs applied in uncontrolled settings such as real senior homes.

  16. Distribution, size, and interannual, seasonal and diel food habits of northern Gulf of Alaska juvenile pink salmon, Oncorhynchus gorbuscha

    Science.gov (United States)

    Armstrong, Janet L.; Boldt, Jennifer L.; Cross, Alison D.; Moss, Jamal H.; Davis, Nancy D.; Myers, Katherine W.; Walker, Robert V.; Beauchamp, David A.; Haldorson, Lewis J.

    2005-01-01

    An integral part of assessing the northern Gulf of Alaska (GOA) ecosystem is the analysis of the food habits and feeding patterns of abundant zooplanktivorous fish. Juvenile pink salmon Oncorhynchus gorbuscha are highly abundant zooplanktivores, and support valuable commercial fisheries as adults. We document variability in pink salmon distribution and size from summer to early fall, and present major trends in their food habits by summarizing interannual (August 1999-2001), seasonal (July-October 2001) and diel (August 2000, and July-September 2001) feeding patterns based on analysis of stomach contents of juvenile pink salmon collected along the Seward Line (GOA) and in Prince William Sound (PWS), Alaska. Diets of juvenile pink salmon were more diverse in 2001 compared to either 1999 or 2000. Small pteropods ( Limacina helicina) composed the majority (>60%) of prey consumed in 1999 and 2000; whereas large copepods, euphausiids, and small pteropods composed the majority of prey in 2001. As juvenile pink salmon increased in size, they consumed increasingly larger prey from August to October 2001 in the GOA. The diet of GOA juvenile pink salmon was different and more diverse than the diet of fish caught in PWS. The dominant prey in PWS during July-October was hyperiid amphipods, whereas the primary prey in the GOA were larvaceans and euphausiids in July, then copepods plus small pteropods, amphipods, euphausiids, larval crabs, and shrimp in August. In September and October, diets in both PWS and GOA included high percentages of larger prey items, including fish, euphausiids, and large pteropods ( Clio pyramidata). Diel comparisons of stomach contents showed pink salmon fed during daylight hours with stomach fullness increasing from dawn to a maximum fullness 8-12 h after sunrise, and declining thereafter. We hypothesize that juvenile pink salmon in the northern GOA consumed distinct and varied prey from the suite of zooplankton available during summer months, July

  17. SEASONAL DIFFERENCES IN PHYSICAL ACTIVITY AND SEDENTARY PATTERNS: THE RELEVANCE OF THE PA CONTEXT

    Directory of Open Access Journals (Sweden)

    Pedro Silva

    2011-03-01

    Full Text Available The aim of this pilot study was to characterize seasonal variation in the moderate to vigorous physical activity (MVPA and sedentary behavior of Portuguese school youth, and understand the influence of activity choices and settings. The participants in this study were 24 students, aged 10-13 years. Accelerometers measured daily PA over 7 consecutive days, in different seasons May - June and January - February. In summer, boys accumulated more minutes in MVPA (928 minutes/week than girls (793 minutes/week. In winter the pattern was reversed with girls accumulating more activity than boys (736 minutes/week vs. 598 minutes/week. The repeated measures ANOVA revealed significant effects for season (F = 5.98, p = 0.023 and in- school vs. out-of-school (F = 6.53, p = 0.018. Youth were more active in the summer and activity levels were higher after school than in school. Summer season provided relevant contexts for youth physical activity accumulation. Winter season may have been a significant barrier to boy's preferred PA context. Differences in choices of outdoor or indoor PA, after school, explained the gender differences in seasonal activity patterns

  18. Cognitive and metacognitive activity in mathematical problem solving: prefrontal and parietal patterns.

    Science.gov (United States)

    Anderson, John R; Betts, Shawn; Ferris, Jennifer L; Fincham, Jon M

    2011-03-01

    Students were taught an algorithm for solving a new class of mathematical problems. Occasionally in the sequence of problems, they encountered exception problems that required that they extend the algorithm. Regular and exception problems were associated with different patterns of brain activation. Some regions showed a Cognitive pattern of being active only until the problem was solved and no difference between regular or exception problems. Other regions showed a Metacognitive pattern of greater activity for exception problems and activity that extended into the post-solution period, particularly when an error was made. The Cognitive regions included some of parietal and prefrontal regions associated with the triple-code theory of (Dehaene, S., Piazza, M., Pinel, P., & Cohen, L. (2003). Three parietal circuits for number processing. Cognitive Neuropsychology, 20, 487-506) and associated with algebra equation solving in the ACT-R theory (Anderson, J. R. (2005). Human symbol manipulation within an 911 integrated cognitive architecture. Cognitive science, 29, 313-342. Metacognitive regions included the superior prefrontal gyrus, the angular gyrus of the triple-code theory, and frontopolar regions.

  19. Electromyographical Comparison of Muscle Activation Patterns Across Three Commonly Performed Kettlebell Exercises.

    Science.gov (United States)

    Lyons, Brian C; Mayo, Jerry J; Tucker, W Steven; Wax, Ben; Hendrix, Russell C

    2017-09-01

    Lyons, BC, Mayo, JJ, Tucker, WS, Wax, B, and Hendrix, RC. Electromyographical comparison of muscle activation patterns across 3 commonly performed kettlebell exercises. J Strength Cond Res 31(9): 2363-2370, 2017-The purpose of this study was to compare the muscle activation patterns of 3 different kettlebell (KB) exercises using electromyography (EMG). Fourteen resistance-trained subjects completed a 1-arm swing (Swing), 1-arm swing style snatch (Snatch), and a 1-arm clean (Clean) using a self-selected 8 to 10 repetition maximum load for each exercise. Trial sessions consisted of subjects performing 5 repetitions of each KB exercise. Mean EMG was used to assess the muscle activation of the biceps brachii, anterior deltoid, posterior deltoid, erector spinae (ES), vastus lateralis (VL), biceps femoris, contralateral external oblique (EO), and gluteus maximus during each lift using surface electrodes. The mean EMG was normalized using maximal voluntary contractions obtained from manual muscle testing. Repeated-measures analysis of variance revealed a significant difference in the muscle activation patterns of the ES (Swing > Snatch), EO (Snatch, Clean > Swing), and VL (Swing > Clean) across the 3 KB exercises. We conclude that although the KB Swing, Snatch, and Clean are total body exercises, they place different demands on the ES, contralateral EO, and the VL. Therefore, KBs represent an authentic alternative for lifters, and the Swing, Snatch, and Clean are not redundant exercises.

  20. Distribution patterns of typical enzyme activities in tundra soils on the Fildes Peninsula of maritime Antarctica

    Institute of Scientific and Technical Information of China (English)

    DING Wei; WANG Qing; ZHU Renbin; MA Dawei

    2015-01-01

    Soil enzyme activities can be used as indicators of microbial activity and soil fertility. In this paper, the activities of invertase (IA), phosphatase (PA) and urease (UA) were investigated in tundra soils collected from marine animal colonies, areas of human activity and background areas on Fildes Peninsula, maritime Antarctica. Soil enzyme activities were in the range of 1.0–82.7 mg·kg-1·h-1 for IA, 0.2–8.2 mg·kg-1·h-1 for PA and 0.2–39.8 mg·kg-1·h-1 for UA. The spatial distribution patterns for soil enzyme activities corresponded strongly with marine animal activity and human activity. Significantly higher soil IA and PA activities occurred in penguin colony soils, whereas seal colony soils showed higher UA activity. Statistical analysis indicated that soil IA activity was controlled by the levels of soil nutrients (TOC, TN and TP), PA activity was closely related with TP, and UA activity was affected by the soil pH. Overall, the deposition amount of penguin guano or seal excreta could impact the distribution of enzyme activity in Antarctic tundra soils. Multiple stepwise regression models were established between the enzyme activities, soil physicochemical properties and heavy metals Cu and Zn ([IA]=0.7[TP]–0.2[Cu]+22.3[TN]+15.1, [PA]=0.3[TP]+0.03[Mc]+0.2, [UA]=16.7[pH]–0.5[Cu]+ 0.4[Zn]–72.6). These models could be used to predict enzyme activities in the tundra soils, which could be helpful to study the effects of marine animal activity and environmental change on tundra ecosystems in maritime Antarctica.

  1. Active pauses induce more variable electromyographic pattern of the trapezius muscle activity during computer work

    DEFF Research Database (Denmark)

    Samani, Afshin; Holtermann, Andreas; Søgaard, Karen

    2009-01-01

    , with passive (relax) and active (30% maximum voluntary contraction of shoulder elevation) pauses given every 2 min at two different work paces (low/high). Bipolar SEMG from four parts of the trapezius muscle was recorded. The relative rest time was higher for the lower parts compared with the upper......The aim of this laboratory study was to evaluate effects of active and passive pauses and investigate the distribution of the trapezius surface electromyographic (SEMG) activity during computer mouse work. Twelve healthy male subjects performed four sessions of computer work for 10 min in one day...... of the trapezius (pactive pause compared with passive one (p

  2. Restrictive pattern on spirometry: association with cardiovascular risk and level of physical activity in asymptomatic adults

    Directory of Open Access Journals (Sweden)

    Evandro Fornias Sperandio

    2016-02-01

    Full Text Available Objective : To determine whether a restrictive pattern on spirometry is associated with the level of physical activity in daily life (PADL, as well as with cardiovascular disease (CVD risk factors, in asymptomatic adults. Methods : A total of 374 participants (mean age, 41 ± 14 years underwent spirometry, which included the determination of FVC and FEV1. A restrictive pattern on spirometry was defined as an FEV1/FVC ratio > 0.7 and an FVC < 80% of the predicted value. After conducting demographic, anthropometric, and CVD risk assessments, we evaluated body composition, muscle function, and postural balance, as well as performing cardiopulmonary exercise testing and administering the six-minute walk test. The PADL was quantified with a triaxial accelerometer. Results : A restrictive pattern on spirometry was found in 10% of the subjects. After multivariate logistic regression, adjusted for confounders (PADL and cardiorespiratory fitness, the following variables retained significance (OR; 95% CI as predictors of a restrictive pattern: systemic arterial hypertension (17.5; 1.65-184.8, smoking (11.6; 1.56-87.5, physical inactivity (8.1; 1.43-46.4, larger center-of-pressure area while standing on a force platform (1.34; 1.05-1.71; and dyslipidemia (1.89; 1.12-1.98. Conclusions : A restrictive pattern on spirometry appears to be common in asymptomatic adults. We found that CVD risk factors, especially systemic arterial hypertension, smoking, and physical inactivity, were directly associated with a restrictive pattern, even when the analysis was adjusted for PADL and cardiorespiratory fitness. Longitudinal studies are needed in order to improve understanding of the etiology of a restrictive pattern as well as to aid in the design of preventive strategies.

  3. Modality-independent representations of small quantities based on brain activation patterns.

    Science.gov (United States)

    Damarla, Saudamini Roy; Cherkassky, Vladimir L; Just, Marcel Adam

    2016-04-01

    Machine learning or MVPA (Multi Voxel Pattern Analysis) studies have shown that the neural representation of quantities of objects can be decoded from fMRI patterns, in cases where the quantities were visually displayed. Here we apply these techniques to investigate whether neural representations of quantities depicted in one modality (say, visual) can be decoded from brain activation patterns evoked by quantities depicted in the other modality (say, auditory). The main finding demonstrated, for the first time, that quantities of dots were decodable by a classifier that was trained on the neural patterns evoked by quantities of auditory tones, and vice-versa. The representations that were common across modalities were mainly right-lateralized in frontal and parietal regions. A second finding was that the neural patterns in parietal cortex that represent quantities were common across participants. These findings demonstrate a common neuronal foundation for the representation of quantities across sensory modalities and participants and provide insight into the role of parietal cortex in the representation of quantity information.

  4. Distinct Patterns of Brain Activity Characterise Lexical Activation and Competition in Spoken Word Production

    NARCIS (Netherlands)

    Piai, V.; Roelofs, A.P.A.; Jensen, O.; Schoffelen, J.M.; Bonnefond, M.

    2014-01-01

    According to a prominent theory of language production, concepts activate multiple associated words in memory, which enter into competition for selection. However, only a few electrophysiological studies have identified brain responses reflecting competition. Here, we report a magnetoencephalography

  5. Temporal protein expression pattern in intracellular signalling cascade during T-cell activation: A computational study

    Indian Academy of Sciences (India)

    Piyali Ganguli; Saikat Chowdhury; Rupa Bhowmick; Ram Rup Sarkar

    2015-10-01

    Various T-cell co-receptor molecules and calcium channel CRAC play a pivotal role in the maintenance of cell’s functional responses by regulating the production of effector molecules (mostly cytokines) that aids in immune clearance and also maintaining the cell in a functionally active state. Any defect in these co-receptor signalling pathways may lead to an altered expression pattern of the effector molecules. To study the propagation of such defects with time and their effect on the intracellular protein expression patterns, a comprehensive and largest pathway map of T-cell activation network is reconstructed manually. The entire pathway reactions are then translated using logical equations and simulated using the published time series microarray expression data as inputs. After validating the model, the effect of in silico knock down of co-receptor molecules on the expression patterns of their downstream proteins is studied and simultaneously the changes in the phenotypic behaviours of the T-cell population are predicted, which shows significant variations among the proteins expression and the signalling routes through which the response is propagated in the cytoplasm. This integrative computational approach serves as a valuable technique to study the changes in protein expression patterns and helps to predict variations in the cellular behaviour.

  6. Macro-Scale Patterns in Upwelling/Downwelling Activity at North American West Coast

    Science.gov (United States)

    Saldívar-Lucio, Romeo; Di Lorenzo, Emanuele; Nakamura, Miguel; Villalobos, Héctor; Lluch-Cota, Daniel; Del Monte-Luna, Pablo

    2016-01-01

    The seasonal and interannual variability of vertical transport (upwelling/downwelling) has been relatively well studied, mainly for the California Current System, including low-frequency changes and latitudinal heterogeneity. The aim of this work was to identify potentially predictable patterns in upwelling/downwelling activity along the North American west coast and discuss their plausible mechanisms. To this purpose we applied the min/max Autocorrelation Factor technique and time series analysis. We found that spatial co-variation of seawater vertical movements present three dominant low-frequency signals in the range of 33, 19 and 11 years, resembling periodicities of: atmospheric circulation, nodal moon tides and solar activity. Those periodicities might be related to the variability of vertical transport through their influence on dominant wind patterns, the position/intensity of pressure centers and the strength of atmospheric circulation cells (wind stress). The low-frequency signals identified in upwelling/downwelling are coherent with temporal patterns previously reported at the study region: sea surface temperature along the Pacific coast of North America, catch fluctuations of anchovy Engraulis mordax and sardine Sardinops sagax, the Pacific Decadal Oscillation, changes in abundance and distribution of salmon populations, and variations in the position and intensity of the Aleutian low. Since the vertical transport is an oceanographic process with strong biological relevance, the recognition of their spatio-temporal patterns might allow for some reasonable forecasting capacity, potentially useful for marine resources management of the region. PMID:27893826

  7. Timescales of multineuronal activity patterns reflect temporal structure of visual stimuli.

    Directory of Open Access Journals (Sweden)

    Ovidiu F Jurjuţ

    Full Text Available The investigation of distributed coding across multiple neurons in the cortex remains to this date a challenge. Our current understanding of collective encoding of information and the relevant timescales is still limited. Most results are restricted to disparate timescales, focused on either very fast, e.g., spike-synchrony, or slow timescales, e.g., firing rate. Here, we investigated systematically multineuronal activity patterns evolving on different timescales, spanning the whole range from spike-synchrony to mean firing rate. Using multi-electrode recordings from cat visual cortex, we show that cortical responses can be described as trajectories in a high-dimensional pattern space. Patterns evolve on a continuum of coexisting timescales that strongly relate to the temporal properties of stimuli. Timescales consistent with the time constants of neuronal membranes and fast synaptic transmission (5-20 ms play a particularly salient role in encoding a large amount of stimulus-related information. Thus, to faithfully encode the properties of visual stimuli the brain engages multiple neurons into activity patterns evolving on multiple timescales.

  8. Learning new gait patterns: Exploratory muscle activity during motor learning is not predicted by motor modules.

    Science.gov (United States)

    Ranganathan, Rajiv; Krishnan, Chandramouli; Dhaher, Yasin Y; Rymer, William Z

    2016-03-21

    The motor module hypothesis in motor control proposes that the nervous system can simplify the problem of controlling a large number of muscles in human movement by grouping muscles into a smaller number of modules. Here, we tested one prediction of the modular organization hypothesis by examining whether there is preferential exploration along these motor modules during the learning of a new gait pattern. Healthy college-aged participants learned a new gait pattern which required increased hip and knee flexion during the swing phase while walking in a lower-extremity robot (Lokomat). The new gait pattern was displayed as a foot trajectory in the sagittal plane and participants attempted to match their foot trajectory to this template. We recorded EMG from 8 lower-extremity muscles and we extracted motor modules during both baseline walking and target-tracking using non-negative matrix factorization (NMF). Results showed increased trajectory variability in the first block of learning, indicating that participants were engaged in exploratory behavior. Critically, when we examined the muscle activity during this exploratory phase, we found that the composition of motor modules changed significantly within the first few strides of attempting the new gait pattern. The lack of persistence of the motor modules under even short time scales suggests that motor modules extracted during locomotion may be more indicative of correlated muscle activity induced by the task constraints of walking, rather than reflecting a modular control strategy.

  9. Temporal pattern of acoustic imaging noise asymmetrically modulates activation in the auditory cortex.

    Science.gov (United States)

    Ranaweera, Ruwan D; Kwon, Minseok; Hu, Shuowen; Tamer, Gregory G; Luh, Wen-Ming; Talavage, Thomas M

    2016-01-01

    This study investigated the hemisphere-specific effects of the temporal pattern of imaging related acoustic noise on auditory cortex activation. Hemodynamic responses (HDRs) to five temporal patterns of imaging noise corresponding to noise generated by unique combinations of imaging volume and effective repetition time (TR), were obtained using a stroboscopic event-related paradigm with extra-long (≥27.5 s) TR to minimize inter-acquisition effects. In addition to confirmation that fMRI responses in auditory cortex do not behave in a linear manner, temporal patterns of imaging noise were found to modulate both the shape and spatial extent of hemodynamic responses, with classically non-auditory areas exhibiting responses to longer duration noise conditions. Hemispheric analysis revealed the right primary auditory cortex to be more sensitive than the left to the presence of imaging related acoustic noise. Right primary auditory cortex responses were significantly larger during all the conditions. This asymmetry of response to imaging related acoustic noise could lead to different baseline activation levels during acquisition schemes using short TR, inducing an observed asymmetry in the responses to an intended acoustic stimulus through limitations of dynamic range, rather than due to differences in neuronal processing of the stimulus. These results emphasize the importance of accounting for the temporal pattern of the acoustic noise when comparing findings across different fMRI studies, especially those involving acoustic stimulation.

  10. Fetal functional brain age assessed from universal developmental indices obtained from neuro-vegetative activity patterns.

    Directory of Open Access Journals (Sweden)

    Dirk Hoyer

    Full Text Available Fetal brain development involves the development of the neuro-vegetative (autonomic control that is mediated by the autonomic nervous system (ANS. Disturbances of the fetal brain development have implications for diseases in later postnatal life. In that context, the fetal functional brain age can be altered. Universal principles of developmental biology applied to patterns of autonomic control may allow a functional age assessment. The work aims at the development of a fetal autonomic brain age score (fABAS based on heart rate patterns. We analysed n = 113 recordings in quiet sleep, n = 286 in active sleep, and n = 29 in active awakeness from normals. We estimated fABAS from magnetocardiographic recordings (21.4-40.3 weeks of gestation preclassified in quiet sleep (n = 113, 63 females and active sleep (n = 286, 145 females state by cross-validated multivariate linear regression models in a cross-sectional study. According to universal system developmental principles, we included indices that address increasing fluctuation range, increasing complexity, and pattern formation (skewness, power spectral ratio VLF/LF, pNN5. The resulting models constituted fABAS. fABAS explained 66/63% (coefficient of determination R(2 of training and validation set of the variance by age in quiet, while 51/50% in active sleep. By means of a logistic regression model using fluctuation range and fetal age, quiet and active sleep were automatically reclassified (94.3/93.1% correct classifications. We did not find relevant gender differences. We conclude that functional brain age can be assessed based on universal developmental indices obtained from autonomic control patterns. fABAS reflect normal complex functional brain maturation. The presented normative data are supplemented by an explorative study of 19 fetuses compromised by intrauterine growth restriction. We observed a shift in the state distribution towards active awakeness. The lower WGA

  11. Differential Activation Patterns of fMRI in Sleep-Deprived Brain: Restoring Effects of Acupuncture

    Directory of Open Access Journals (Sweden)

    Lei Gao

    2014-01-01

    Full Text Available Previous studies suggested a remediation role of acupuncture in insomnia, and acupuncture also has been used in insomnia empirically and clinically. In this study, we employed fMRI to test the role of acupuncture in sleep deprivation (SD. Sixteen healthy volunteers (8 males were recruited and scheduled for three fMRI scanning procedures, one following the individual’s normal sleep and received acupuncture SP6 (NOR group and the other two after 24 h of total SD with acupuncture on SP6 (SD group or sham (Sham group. The sessions were counterbalanced approximately two weeks apart. Acupuncture stimuli elicited significantly different activation patterns of three groups. In NOR group, the right superior temporal lobe, left inferior parietal lobule, and left postcentral gyrus were activated; in SD group, the anterior cingulate cortex, bilateral insula, left basal ganglia, and thalamus were significantly activated while, in Sham group, the bilateral thalamus and left cerebellum were activated. Different activation patterns suggest a unique role of acupuncture on SP6 in remediation of SD. SP6 elicits greater and anatomically different activations than those of sham stimuli; that is, the salience network, a unique interoceptive autonomic circuit, may indicate the mechanism underlying acupuncture in restoring sleep deprivation.

  12. Daily Physical Activity Patterns During the Early Stage of Alzheimer's Disease.

    Science.gov (United States)

    Varma, Vijay R; Watts, Amber

    2017-01-01

    Alzheimer's disease (AD) is a neurodegenerative disease that results in severe disability. Very few studies have explored changes in daily physical activity patterns during early stages of AD when components of physical function and mobility may be preserved. Our study explored differences in daily physical activity profiles, independent of the effects of non-cognitive factors including physical function and age, among individuals with mild AD compared to controls. Patients with mild AD and controls (n = 92) recruited from the University of Kansas Alzheimer's Disease Center Registry, wore the Actigraph GT3X+ for seven days, and provided objective physical function (VO2 max) and mobility data. Using multivariate linear regression, we explored whether individuals with mild AD had different daily average and diurnal physical activity patterns compared to controls independent of non-cognitive factors that may affect physical activity, including physical function and mobility. We found that mild AD was associated with less moderate-intensity physical activity (p testing time-of-day specific physical activity interventions targeting individuals in the early stages of AD, prior to significant declines in mobility and physical function.

  13. Patterns of frontoparietal activation as a marker for unsuccessful visuospatial processing in healthy aging.

    Science.gov (United States)

    Drag, Lauren L; Light, Sharee N; Langenecker, Scott A; Hazlett, Kathleen E; Wilde, Elisabeth A; Welsh, Robert; Steinberg, Brett A; Bieliauskas, Linas A

    2016-09-01

    Visuospatial abilities are sensitive to age-related decline, although the neural basis for this decline (and its everyday behavioral correlates) is as yet poorly understood. fMRI was employed to examine age-related differences in patterns of functional activation that underlie changes in visuospatial processing. All participants completed a brief neuropsychological battery and also a figure ground task (FGT) assessing visuospatial processing while fMRI was recorded. Participants included 16 healthy older adults (OA; aged 69-82 years) and 16 healthy younger adults (YA; aged 20-35 years). We examined age-related differences in behavioral performance on the FGT in relation to patterns of fMRI activation. OA demonstrated reduced performance on the FGT task and showed increased activation of supramarginal parietal cortex as well as increased activation of frontal and temporal regions compared to their younger counterparts. Performance on the FGT related to increased supramarginal gyrus activity and increased medial prefrontal activity in OAs, but not YAs. Our results are consistent with an anterior-posterior compensation model. Successful FGT performance requires the perception and integration of multiple stimuli and thus it is plausible that healthy aging may be accompanied by changes in visuospatial processing that mimic a subtle form of dorsal simultanagnosia. Overall, decreased visuospatial processing in OA relates to an altered frontoparietal neurobiological signature that may contribute to the general phenomenon of increasingly fragmented execution of behavior associated with normal aging.

  14. Plasmonic modulator optimized by patterning of active layer and tuning permittivity

    DEFF Research Database (Denmark)

    Babicheva, Viktoriia; Lavrinenko, Andrei

    2012-01-01

    We study an ultra-compact plasmonic modulator that can be applied in photonic integrated circuits. The modulator is a metal-insulator-metal waveguide with an additional ultra-thin layer of indium tin oxide (ITO). Bias is applied to the multilayer core by means of metal plates that serve...... several optimizations. We examine influence of the ITO permittivity on the modulator's performance and point out appropriate values. We analyze eigenmodes of the waveguide structure and specify the range for its efficient operation. We show that substituting the continuous active layer by a one......-dimension periodic stripes increases transmittance through the device and keeps the modulator's performance at the same level. The dependence on the pattern size and filling factor of the active material is analyzed and optimum parameters are found. Patterned ITO layers allow us to design a Bragg grating inside...

  15. Patterns of Spontaneous Local Network Activity in Developing Cerebral Cortex: Relationship to Adult Cognitive Function.

    Science.gov (United States)

    Peinado, Alejandro; Abrams, Charles K

    2015-01-01

    Detecting neurodevelopμental disorders of cognition at the earliest possible stages could assist in understanding them mechanistically and ultimately in treating them. Finding early physiological predictors that could be visualized with functional neuroimaging would represent an important advance in this regard. We hypothesized that one potential source of physiological predictors is the spontaneous local network activity prominent during specific periods in development. To test this we used calcium imaging in brain slices and analyzed variations in the frequency and intensity of this early activity in one area, the entorhinal cortex (EC), in order to correlate early activity with level of cognitive function later in life. We focused on EC because of its known role in different types of cognitive processes and because it is an area where spontaneous activity is prominent during early postnatal development in rodent models of cortical development. Using rat strains (Long-Evans, Wistar, Sprague-Dawley and Brattleboro) known to differ in cognitive performance in adulthood we asked whether neonatal animals exhibit corresponding strain-related differences in EC spontaneous activity. Our results show significant differences in this activity between strains: compared to a high cognitive-performing strain, we consistently found an increase in frequency and decrease in intensity in neonates from three lower performing strains. Activity was most different in one strain considered a model of schizophrenia-like psychopathology. While we cannot necessarily infer a causal relationship between early activity and adult cognition our findings suggest that the pattern of spontaneous activity in development could be an early predictor of a developmental trajectory advancing toward sub-optimal cognitive performance in adulthood. Our results further suggest that the strength of dopaminergic signaling, by setting the balance between excitation and inhibition, is a potential underlying

  16. Geographic Variation in Daily Temporal Activity Patterns of a Neotropical Marsupial (Gracilinanus agilis)

    Science.gov (United States)

    Vieira, Emerson M.; de Camargo, Nícholas F.; Colas, Paul F.; Ribeiro, Juliana F.; Cruz-Neto, Ariovaldo P.

    2017-01-01

    The temporal activity of animals is an outcome of both biotic and abiotic factors, which may vary along the geographic range of the species. Therefore, studies conducted with a species in different localities with distinct features could elucidate how animals deal with such factors. In this study, we used live traps equipped with timing devices to investigate the temporal activity patterns of the didelphid Gracilinanus agilis in two dry-woodland areas of the Brazilian savanna (Cerrado). These areas were located about 660 km apart, one in Central Brazil and the other in Southeastern Brazil. We compared such patterns considering both reproductive and non-reproductive periods, and how it varies as a function of temperature on a seasonal basis. In Central Brazil, we found a constant, and temperature-independent activity during the night in both reproductive and non-reproductive periods. On the other hand, in Southeastern Brazil, we detected a constant activity during the reproductive period, but in the non-reproductive period G. agilis presented a peak of activity between two and four hours after sunset. Moreover, in this latter we found a relation between temporal activity and temperature during the autumn and spring. These differences in temporal activity between areas, observed during the non-reproductive period, might be associated with the higher seasonal variability in temperature, and lower mean temperatures in the Southeastern site in comparison to the Central one. In Southeastern Brazil, the decrease in temperature during the non-reproductive season possibly forced G. agilis to be active only at certain hours of the night. However, likely due to the reproductive activities (intensive foraging and searching for mates) this marsupial showed constant, temperature-independent activity during the night in the reproductive period at both sites. PMID:28052077

  17. Activity patterns of Eurasian lynx are modulated by light regime and individual traits over a wide latitudinal range.

    Directory of Open Access Journals (Sweden)

    Marco Heurich

    Full Text Available The activity patterns of most terrestrial animals are regarded as being primarily influenced by light, although other factors, such as sexual cycle and climatic conditions, can modify the underlying patterns. However, most activity studies have been limited to a single study area, which in turn limit the variability of light conditions and other factors. Here we considered a range of variables that might potentially influence the activity of a large carnivore, the Eurasian lynx, in a network of studies conducted with identical methodology in different areas spanning latitudes from 49°7'N in central Europe to 70°00'N in northern Scandinavia. The variables considered both light conditions, ranging from a day with a complete day-night cycle to polar night and polar day, as well as individual traits of the animals. We analysed activity data of 38 individual free-ranging lynx equipped with GPS-collars with acceleration sensors, covering more than 11,000 lynx days. Mixed linear additive models revealed that the lynx activity level was not influenced by the daily daylight duration and the activity pattern was bimodal, even during polar night and polar day. The duration of the active phase of the activity cycle varied with the widening and narrowing of the photoperiod. Activity varied significantly with moonlight. Among adults, males were more active than females, and subadult lynx were more active than adults. In polar regions, the amplitude of the lynx daily activity pattern was low, likely as a result of the polycyclic activity pattern of their main prey, reindeer. At lower latitudes, the basic lynx activity pattern peaked during twilight, corresponding to the crepuscular activity pattern of the main prey, roe deer. Our results indicated that the basic activity of lynx is independent of light conditions, but is modified by both individual traits and the activity pattern of the locally most important prey.

  18. Patterns of Discrimination, Grievances and Political Activity Among Europe's Roma: A Cross-Sectional Analysis

    Directory of Open Access Journals (Sweden)

    Jonathan Fox

    2001-01-01

    Full Text Available The purpose of this study is to analyse in a large-n cross-sectional format the patterns of discrimination, grievances and political activity among European Roma (Gypsies using data from the Minority at Risk project. The model tested here is a two-step model positing that discrimination leads to grievance formation which in turn leads to protest and rebellion. The results show that the Roma, in general, conform to this model but differ in some important specifics.

  19. Mapping field-scale spatial patterns of size and activity of the denitrifier community.

    Science.gov (United States)

    Philippot, Laurent; Cuhel, Jiri; Saby, Nicolas P A; Chèneby, Dominique; Chronáková, Alicia; Bru, David; Arrouays, Dominique; Martin-Laurent, Fabrice; Simek, Miloslav

    2009-06-01

    There is ample evidence that microbial processes can exhibit large variations in activity on a field scale. However, very little is known about the spatial distribution of the microbial communities mediating these processes. Here we used geostatistical modelling to explore spatial patterns of size and activity of the denitrifying community, a functional guild involved in N-cycling, in a grassland field subjected to different cattle grazing regimes. We observed a non-random distribution pattern of the size of the denitrifier community estimated by quantification of the denitrification genes copy numbers with a macro-scale spatial dependence (6-16 m) and mapped the distribution of this functional guild in the field. The spatial patterns of soil properties, which were strongly affected by presence of cattle, imposed significant control on potential denitrification activity, potential N(2)O production and relative abundance of some denitrification genes but not on the size of the denitrifier community. Absolute abundance of most denitrification genes was not correlated with the distribution patterns of potential denitrification activity or potential N(2)O production. However, the relative abundance of bacteria possessing the nosZ gene encoding the N(2)O reductase in the total bacterial community was a strong predictor of the N(2)O/(N(2) + N(2)O) ratio, which provides evidence for a relationship between bacterial community composition based on the relative abundance of denitrifiers in the total bacterial community and ecosystem processes. More generally, the presented geostatistical approach allows integrated mapping of microbial communities, and hence can facilitate our understanding of relationships between the ecology of microbial communities and microbial processes along environmental gradients.

  20. Exploring the Use of Activity Patterns for Smart Monitoring of Nuclear Facilities

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Karen Ann [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2017-07-10

    The world is at an inflection point where our ability to collect data now far outpaces our ability to make use of it. LANL has a number of efforts to help us pull more meaningful insights out of our data and target resources to where they will be most impactful. We are exploring an approach to recognizing activity patterns across disparate data streams for a more holistic view of nuclear facility monitoring.

  1. Synthetic studies on taxanes: A domino-enyne metathesis/Diels-Alder approach to the AB-ring

    Indian Academy of Sciences (India)

    Krishna P Kaliappan; Velayutham Ravikumar; Sandip A Pujari

    2008-01-01

    A domino enyne cross-metathesis/intramolecular Diels-Alder reaction has been successfully used to synthesize a bicyclo[5.3.1] undecene, corresponding to AB-ring of taxol without the gem dimethyl group.

  2. Asymmetric Hetero Diels-Alder Reaction of Chiral Imines with Danishefsky' s Diene Catalyzed by Yb(OTf) 3

    Institute of Scientific and Technical Information of China (English)

    QIAN, Chang- Tao; WANG, Long-Cheng; CHEN,Rui-Fang

    2001-01-01

    Rcaction of chirai imines with Danishefsky' s diene in the presence of a catalytic amount (20 mol% ) of ytterbium trffiate afforded the corresponding hetero Diels-Alder adducts with a moderate to good diastereoselectivity.

  3. Differential patterns of cortical activation as a function of fluid reasoning complexity.

    Science.gov (United States)

    Perfetti, Bernardo; Saggino, Aristide; Ferretti, Antonio; Caulo, Massimo; Romani, Gian Luca; Onofrj, Marco

    2009-02-01

    Fluid intelligence (gf) refers to abstract reasoning and problem solving abilities. It is considered a human higher cognitive factor central to general intelligence (g). The regions of the cortex supporting gf have been revealed by recent bioimaging studies and valuable hypothesis on the neural correlates of individual differences have been proposed. However, little is known about the interaction between individual variability in gf and variation in cortical activity following task complexity increase. To further investigate this, two samples of participants (high-IQ, N = 8; low-IQ, N = 10) with significant differences in gf underwent two reasoning (moderate and complex) tasks and a control task adapted from the Raven progressive matrices. Functional magnetic resonance was used and the recorded signal analyzed between and within the groups. The present study revealed two opposite patterns of neural activity variation which were probably a reflection of the overall differences in cognitive resource modulation: when complexity increased, high-IQ subjects showed a signal enhancement in some frontal and parietal regions, whereas low-IQ subjects revealed a decreased activity in the same areas. Moreover, a direct comparison between the groups' activation patterns revealed a greater neural activity in the low-IQ sample when conducting moderate task, with a strong involvement of medial and lateral frontal regions thus suggesting that the recruitment of executive functioning might be different between the groups. This study provides evidence for neural differences in facing reasoning complexity among subjects with different gf level that are mediated by specific patterns of activation of the underlying fronto-parietal network.

  4. Acute caffeine administration effect on brain activation patterns in mild cognitive impairment.

    Science.gov (United States)

    Haller, Sven; Montandon, Marie-Louise; Rodriguez, Cristelle; Moser, Dominik; Toma, Simona; Hofmeister, Jeremy; Sinanaj, Indrit; Lovblad, Karl-Olof; Giannakopoulos, Panteleimon

    2014-01-01

    Previous studies showed that acute caffeine administration enhances task-related brain activation in elderly individuals with preserved cognition. To explore the effects of this widely used agent on cognition and brain activation in early phases of cognitive decline, we performed a double-blinded, placebo-controlled functional magnetic resonance imaging (fMRI) study during an n-back working memory task in 17 individuals with mild cognitive impairment (MCI) compared to 17 age-matched healthy controls (HC). All individuals were regular caffeine consumers with an overnight abstinence and given 200 mg caffeine versus placebo tablets 30 minutes before testing. Analyses included assessment of task-related activation (general linear model), functional connectivity (tensorial-independent component analysis, TICA), baseline perfusion (arterial spin labeling, ASL), grey matter density (voxel-based morphometry, VBM), and white matter microstructure (tract-based spatial statistics, TBSS). Acute caffeine administration induced a focal activation of the prefrontal areas in HC with a more diffuse and posteromedial activation pattern in MCI individuals. In MCI, TICA documented a significant caffeine-related enhancement in the prefrontal cortex, supplementary motor area, ventral premotor and parietal cortex as well as the basal ganglia and cerebellum. The absence of significant group differences in baseline ASL perfusion patterns supports a neuronal rather than a purely vascular origin of these differences. The VBM and TBSS analyses excluded potentially confounding differences in grey matter density and white matter microstructure between MCI and HC. The present findings suggest a posterior displacement of working memory-related brain activation patterns after caffeine administration in MCI that may represent a compensatory mechanism to counterbalance a frontal lobe dysfunction.

  5. Objectively measured physical activity in two-year-old children - levels, patterns and correlates.

    Science.gov (United States)

    Johansson, Elin; Hagströmer, Maria; Svensson, Viktoria; Ek, Anna; Forssén, Michaela; Nero, Håkan; Marcus, Claude

    2015-01-24

    The aim was to describe levels, patterns and correlates of physical activity and sedentary behavior in a sample of Swedish children, two years of age, with normal weight, overweight and obese parents. Data from 123 children, 37 with normal-weight parents and 86 with overweight/obese parents, enrolled in the Early Stockholm Obesity Prevention Project study was used. Children wore an Actigraph GT3X+ accelerometer for seven days. Average activity (counts per minute), number of steps and time spent in low and high-intensity physical activity and in sedentary was assessed. Differences between weekdays and weekend days were examined as were correlations with sex, body mass index (BMI), motor skills and family-related factors. Children were active at high intensity 11% of the day. On average 55% of the day was spent being sedentary. Number of steps and time in low-intensity physical activity differed between weekdays and weekend days: on weekdays, 363 more steps (p = 0.01) and six more minutes in low physical activity (p = 0.04). No differences were found for any physical activity or sedentary behavior variable by sex, BMI, motor skills or any family-related variable (p = 0.07 - 0.95). Two-year-old children have an intermittent activity pattern, that is almost similar on weekdays and they spend about half of the daytime active. The absence of any association with sex, BMI, motor skills or parental factors indicates that the individual variation in this age group is primarily due to endogenous factors. Clinicaltrials.gov: NCT01198847 .

  6. Impact of variations in solar activity on hydrological decadal patterns in northern Italy

    Science.gov (United States)

    Zanchettin, D.; Rubino, A.; Traverso, P.; Tomasino, M.

    2008-06-01

    Using spectral and statistical analyses of discharges and basin average precipitation rates acquired over the Po River since the early 1800s, we investigate the impact of variations in solar activity on hydrological decadal patterns over northern Italy. Wet and dry periods appear to alternate in accordance with polarized sunspot cycles. Intriguingly, a solar signature on Po River discharges is detected to be highly significant since the late 1800s, before the onset of sunspots hyperactivity established by the middle 1900s. In particular, observed hydrological patterns over northern Italy are significantly correlated, under periods of quiet sunspot activity, with parameters characterizing the Sun's orbital motion, specifically with the time derivative of the solar angular momentum (τ) which is thought to modulate the strength of the solar wind and sunspot dynamics under weak sunspot activity. The North Atlantic Oscillation (NAO) is detected as potential link between the Sun and Po River discharges, since it is significantly correlated with both solar activity and the decadal variability in the north Italian climate. In particular, positive (negative) NAO anomalies, which are associated with comparatively lower (higher) Po River discharges, are assessed to alternatively correlate at decadal timescales either with τ or with the Earth's geomagnetic activity (GA), which closely follows sunspot activity. This changing correlation seems to be regulated by the strength of sunspot activity: under periods of quiet sunspot activity, a weakening of the GA-NAO connection and a reinforcement of the τ-NAO connection is observed. In this sense, the strength of solar activity apparently modulates the connection between the NAO and Po River discharges.

  7. Feedbacks between element availability, (diel) cycling and assimilatory uptake in a biologically productive spring-fed river

    Science.gov (United States)

    Kurz, Marie J.; Cohen, Matthew J.; Martin, Jonathan B.; Nifong, Rachel L.

    2016-04-01

    The metabolism of submerged aquatic vegetation directly and indirectly controls the cycling of solutes in streams at diel (24-hour) frequencies. Photosynthesis and respiration induce diel variation in dissolved oxygen (DO) concentrations and pH which, in turn, mediate elemental concentrations via a host of geochemical reactions. Plant metabolism also directly exerts control on water composition via assimilatory uptake, creating diel variation in major nutrients. Trace elements can be essential micronutrients, suggesting their assimilatory uptake could also contribute to diel variation in element concentrations in streams. If diel element variation is indicative of metabolic processing, assessing the magnitude and timing of this diel variation relative to other inorganic controls could be used to estimate the ecosystem demand for those elements, infer ecosystem function, and predict how stream ecosystems may respond to changes in environmental element availability. We evaluated the relationship between the elemental requirements of submerged vegetation and the availability and cycling of elements in streams by comparing spatial and diel variation in stream chemistry with measurements of tissue stoichiometry from submerged vascular plants and algae in the Ichetucknee River (Q = 8 m3/s) , a highly productive spring-fed system in north-central Florida. Diel variations were observed in the concentrations of soluble reactive phosphorus (SRP), Ca, Mg, K, Mn, Fe, V, Cr, Co, Cu, Sr, Ba, and U. Autotrophic assimilation, estimated using the measured stoichiometry and calculations of primary production from diel DO variation, accounted for a significant portion of the in-stream diel variation of some elements, including approximately 100% for K and >30% for Fe and Mn. However, the exact timing of assimilation of these elements remains uncertain relative to the other inorganic controls. Correcting the observed SRP diel signal for the effect of calcite co-precipitation revealed

  8. Reproduction of overall spontaneous pain pattern by manual stimulation of active myofascial trigger points in fibromyalgia patients

    DEFF Research Database (Denmark)

    Ge, Hong-You; Wang, Ying; Fernandez-de-las-Penas, Cesar

    2011-01-01

    It has previously been reported that local and referred pain from active myofascial trigger points (MTPs) in the neck and shoulder region contribute to fibromyalgia (FM) pain and that the pain pattern induced from active MTPs can reproduce parts of the spontaneous clinical FM pain pattern...

  9. Differences in resting metabolic rate and physical activity patterns in lean and overweight/obese pregnant women

    Science.gov (United States)

    Energy requirements vary during pregnancy due to changes in physical activity (PA) and maternal fat stores. This study measured resting metabolic rate (RMR) and PA patterns in healthy lean and overweight/obese (OW) pregnant women. RMR was measured using indirect calorimetry (MOXUS), activity pattern...

  10. Reproduction of overall spontaneous pain pattern by manual stimulation of active myofascial trigger points in fibromyalgia patients

    DEFF Research Database (Denmark)

    Ge, Hong-You; Wang, Ying; Fernandez-de-las-Penas, Cesar

    2011-01-01

    It has previously been reported that local and referred pain from active myofascial trigger points (MTPs) in the neck and shoulder region contribute to fibromyalgia (FM) pain and that the pain pattern induced from active MTPs can reproduce parts of the spontaneous clinical FM pain pattern...

  11. Deviations in daily physical activity patterns in patients with the chronic fatigue syndrome: A case control study

    NARCIS (Netherlands)

    Evering, R.M.H.; Tönis, Thijs; Vollenbroek-Hutten, Miriam Marie Rosé

    2011-01-01

    Deviations in daily physical activity patterns may play an important role in the development and maintenance of fatigue in the chronic fatigue syndrome (CFS). The aim of this study is to gain insight into the objective daily physical activity pattern of patients with CFS in comparison with healthy

  12. Patterns and correlates of physical activity: a cross-sectional study in urban Chinese women

    Directory of Open Access Journals (Sweden)

    Li Hong-Lan

    2007-08-01

    Full Text Available Abstract Background Inactivity is a modifiable risk factor for many diseases. Rapid economic development in China has been associated with changes in lifestyle, including physical activity. The purpose of this study was to investigate the patterns and correlates of physical activity in middle-aged and elderly women from urban Shanghai. Methods Study population consisted of 74,942 Chinese women, 40–70 years of age, participating in the baseline survey of the Shanghai Women's Health Study (1997–2000, an ongo